RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAPKBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000137802

Ensembl transcript IDs: ENST00000456763.6, ENST00000457542.7, ENST00000502292.5, ENST00000503526.1, ENST00000505061.5, ENST00000505373.5, ENST00000506301.1, ENST00000507147.1, ENST00000507762.5, ENST00000510535.1, ENST00000512433.1, ENST00000512970.5, ENST00000514566.5, ENST00000515164.1, ENST00000627631.1

Found 1752 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGCCCAGAGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTaGTGTGGGAAGTCGGGGCACAGCAGGCACGGGCCCGCCCCCGCC +
Preference number: 1 (lower is better)
Translates to: LAQRANLSPTCGGRG*CGKSGHSRHGPAPA
Trigger: GGCGGGGGCGGGCCCGTGCCTGCTGTGCCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCTCTGGGCCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR GCA 90 bp CTCCTCGTGAAGGACCTGGCCCAGAGGGCGAACCTGAGTCCCACCTaGGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGCACAGCAGGCAC +
Preference number: 1 (lower is better)
Translates to: LLVKDLAQRANLSPT*GGRGWCGKSGHSRH
Trigger: GTGCCTGCTGTGCCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCTCTGGGCCAGGTCCTTCACGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR GCA 90 bp AGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATTaGCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTC +
Preference number: 1 (lower is better)
Translates to: RTVPPPGVLQGDWHH*LSAAHQMPVAPGLV
Trigger: GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 90 bp AGGGTAGGACGGTCAGGCAGTGGTTTGGGGATGTCCAGGACCAGGTaGGCCCGGCTGGGCAGGGCCAGCTTGCTGAGTGGTGAGACTCGG +
Preference number: 1 (lower is better)
Translates to: RVGRSGSGLGMSRTR*ARLGRASLLSGETR
Trigger: CCGAGTCTCACCACTCAGCAAGCTGGCCCTGCCCAGCCGGGCTCACCTGGTCCTGGACATCCCCAAACCACTGCCTGACCGTCCTACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 90 bp GGCCATGCGGGTGGCGATGCTAGAGGAGTGGGGAAGGGCCAGGTTTaGAGCAGCTCAAGCGCACTCAGGCTGATGCCCCGGAGCTGGGAA +
Preference number: 1 (lower is better)
Translates to: GHAGGDARGVGKGQV*SSSSALRLMPRSWE
Trigger: TTCCCAGCTCCGGGGCATCAGCCTGAGTGCGCTTGAGCTGCTCCAAACCTGGCCCTTCCCCACTCCTCTAGCATCGCCACCCGCATGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTaGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCT +
Preference number: 1 (lower is better)
Translates to: GCQRTVPPPGVLQGD*HHCLSAAHQMPVAP
Trigger: AGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 90 bp ACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTaGTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCGACATCAGT +
Preference number: 1 (lower is better)
Translates to: TSGGAPGGLAPLPLG*SPDACGTWAGLDIS
Trigger: ACTGATGTCGAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 90 bp TGCCCATGCTTCCTGGGACCAGATGGGATGATGGCCAGCGAGTCCTaGCTAGGGTCCTGCAGGCTTGGGGCCAGTGTTTCCAGCTGCCGC +
Preference number: 1 (lower is better)
Translates to: CPCFLGPDGMMASES*LGSCRLGASVSSCR
Trigger: GCGGCAGCTGGAAACACTGGCCCCAAGCCTGCAGGACCCTAGCCAGGACTCGCTGGCCATCATCCCATCTGGTCCCAGGAAGCATGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 90 bp TTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCCAGCAGCCGGCTaGGGTCCAGGGTGGAGGACAGGGAAGAACAAGGGGCTGAGGAAA +
Preference number: 1 (lower is better)
Translates to: FRMQGEGGLWAPAAG*GPGWRTGKNKGLRK
Trigger: TTTCCTCAGCCCCTTGTTCTTCCCTGTCCTCCACCCTGGACCCCAGCCGGCTGCTGGAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR CCA 90 bp TTTGGTGACAGGAGAGAATGCAGCCAGGGTAGGACGGTCAGGCAGTaGTTTGGGGATGTCCAGGACCAGGTGAGCCCGGCTGGGCAGGGC +
Preference number: 1 (lower is better)
Translates to: FGDRRECSQGRTVRQ*FGDVQDQVSPAGQG
Trigger: GCCCTGCCCAGCCGGGCTCACCTGGTCCTGGACATCCCCAAACCACTGCCTGACCGTCCTACCCTGGCTGCATTCTCTCCTGTCACCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 90 bp CTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTaGAGCTGTGGTAAAGCTGCTCTGACTTACCTGCAGCAGAGGGGA +
Preference number: 1 (lower is better)
Translates to: LCLWRSRAGEGALVA*SCGKAALTYLQQRG
Trigger: TCCCCTCTGCTGCAGGTAAGTCAGAGCAGCTTTACCACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR TCA 90 bp CGCCCCGCTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTaGTGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGT +
Preference number: 1 (lower is better)
Translates to: RPADAGATRPDAASC*WSSQSSGATQICSC
Trigger: ACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAGCGGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 90 bp CACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATCCACACTaGGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGC +
Preference number: 1 (lower is better)
Translates to: HPQLALQGLRRCHPH*GAPCSQSLQWGAPG
Trigger: GCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 90 bp CCACAGAGCAGGCACTGTCAGGGCTGTGCTTTTCTGAGCTCCTGCTaGCTGGGTACACTCTTCCCAGAGTTCCCCGGGCTGGAGCCTGCA +
Preference number: 1 (lower is better)
Translates to: PQSRHCQGCAFLSSC*LGTLFPEFPGLEPA
Trigger: TGCAGGCTCCAGCCCGGGGAACTCTGGGAAGAGTGTACCCAGGCAGCAGGAGCTCAGAAAAGCACAGCCCTGACAGTGCCTGCTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTaGTCCAGCAGGGCCTGTGTCTGCTCGGCTCCCACAGCCCCAGGG +
Preference number: 1 (lower is better)
Translates to: RSIRRSTARSNSSEY*SSRACVCSAPTAPG
Trigger: CCCTGGGGCTGTGGGAGCCGAGCAGACACAGGCCCTGCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 90 bp CAGACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTaGAGGGGCCTGCAGACTGGCCTCATGTCTTTCCTGTGGCACCAG +
Preference number: 1 (lower is better)
Translates to: QTILSFDLPRQQCAW*RGLQTGLMSFLWHQ
Trigger: CTGGTGCCACAGGAAAGACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 90 bp AGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCTGATGCTAGATaGTGTCCATTGGGGCTGACACACACCGAGCGGATGCCCACGCGG +
Preference number: 1 (lower is better)
Translates to: SSCTLSVPIRSPDAR*CPLGLTHTERMPTR
Trigger: CCGCGTGGGCATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTATGGGCACACTTAGGGTGCACGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 90 bp GAGTCCTGGCTAGGGTCCTGCAGGCTTGGGGCCAGTGTTTCCAGCTaGCGCAGATCCAGCATGGATCTAACGCTCAGTTCCACACCTGGC +
Preference number: 1 (lower is better)
Translates to: ESWLGSCRLGASVSS*RRSSMDLTLSSTPG
Trigger: GCCAGGTGTGGAACTGAGCGTTAGATCCATGCTGGATCTGCGGCAGCTGGAAACACTGGCCCCAAGCCTGCAGGACCCTAGCCAGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 90 bp AATCCACAGAGCAGGCACTGTCAGGGCTGTGCTTTTCTGAGCTCCTaGTGCCTGGGTACACTCTTCCCAGAGTTCCCCGGGCTGGAGCCT +
Preference number: 1 (lower is better)
Translates to: NPQSRHCQGCAFLSS*CLGTLFPEFPGLEP
Trigger: AGGCTCCAGCCCGGGGAACTCTGGGAAGAGTGTACCCAGGCAGCAGGAGCTCAGAAAAGCACAGCCCTGACAGTGCCTGCTCTGTGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 90 bp AGATGGGATGATGGCCAGCGAGTCCTGGCTAGGGTCCTGCAGGCTTaGGGCCAGTGTTTCCAGCTGCCGCAGATCCAGCATGGATCTAAC +
Preference number: 1 (lower is better)
Translates to: RWDDGQRVLARVLQA*GQCFQLPQIQHGSN
Trigger: GTTAGATCCATGCTGGATCTGCGGCAGCTGGAAACACTGGCCCCAAGCCTGCAGGACCCTAGCCAGGACTCGCTGGCCATCATCCCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 90 bp GAGTTTGCGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTaGGTATTGCTCCAGCAGGGCCTGTGTCTGCTCGGCTCCCACAGC +
Preference number: 1 (lower is better)
Translates to: EFAFHTPFHGSKQQF*VLLQQGLCLLGSHS
Trigger: GCTGTGGGAGCCGAGCAGACACAGGCCCTGCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACGCAAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 90 bp GGGGGCTTTTCATTCTGGCTAGTGAGTGAAGTCTCAAGGGCCTCCTaGCCATGCTTCCTGGGACCAGATGGGATGATGGCCAGCGAGTCC +
Preference number: 1 (lower is better)
Translates to: GGFSFWLVSEVSRAS*PCFLGPDGMMASES
Trigger: GGACTCGCTGGCCATCATCCCATCTGGTCCCAGGAAGCATGGGCAGGAGGCCCTTGAGACTTCACTCACTAGCCAGAATGAAAAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 90 bp GGCCCAGGTTCTCCCCAACAGAGATACTGCGGGATATCTTGGCCATaGAACTGGTGGTGGGGTTCTGATAGGAGTGAGGCCGAGACGGAC +
Preference number: 1 (lower is better)
Translates to: GPGSPQQRYCGISWP*NWWWGSDRSEAETD
Trigger: GTCCGTCTCGGCCTCACTCCTATCAGAACCCCACCACCAGTTCCATGGCCAAGATATCCCGCAGTATCTCTGTTGGGGAGAACCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 90 bp GCTTCCAGCTCCTGTCGCACTGAAGAGAAGGTGTCTCTGAGGAGCTaGGCAATCCGACTTTGCTCTGCTGAGGGCATCTTGCAGCCAGCC +
Preference number: 1 (lower is better)
Translates to: ASSSCRTEEKVSLRS*AIRLCSAEGILQPA
Trigger: GGCTGGCTGCAAGATGCCCTCAGCAGAGCAAAGTCGGATTGCCCAGCTCCTCAGAGACACCTTCTCTTCAGTGCGACAGGAGCTGGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 90 bp GGAAGTGCAGGTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTaGATACCACATCACCTCTCACCTCGACCCCAGAGTACCCTGTGT +
Preference number: 1 (lower is better)
Translates to: GSAGRGEGPQLADGH*IPHHLSPRPQSTLC
Trigger: ACACAGGGTACTCTGGGGTCGAGGTGAGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTACCTGCACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR TCA 90 bp GTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTaGCTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGC +
Preference number: 1 (lower is better)
Translates to: VGQRPVNEGCSNTGF*LSIIQDAGRRWPLG
Trigger: GCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR TCA 90 bp CAGCCACAGCTTCCAGCTCCTGTCGCACTGAAGAGAAGGTGTCTCTaGGGAGCTGGGCAATCCGACTTTGCTCTGCTGAGGGCATCTTGC +
Preference number: 1 (lower is better)
Translates to: QPQLPAPVALKRRCL*GAGQSDFALLRASC
Trigger: GCAAGATGCCCTCAGCAGAGCAAAGTCGGATTGCCCAGCTCCTCAGAGACACCTTCTCTTCAGTGCGACAGGAGCTGGAAGCTGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 90 bp GCTCAAGTTCTGGCCAGGAGAGTAAGGGGTCACAGGGAAATACAATaGTGGGCCCCTCTTGGAGGGAGAATGGGAGTGGAATGTGCGGGC +
Preference number: 1 (lower is better)
Translates to: AQVLARRVRGHREIQ*WAPLGGRMGVECAG
Trigger: GCCCGCACATTCCACTCCCATTCTCCCTCCAAGAGGGGCCCAGCATTGTATTTCCCTGTGACCCCTTACTCTCCTGGCCAGAACTTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR GCA 90 bp TGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTaGTGCTGTAATCCACAGAGCAGGCACTGTCAGGGCTGTGCTTTT +
Preference number: 1 (lower is better)
Translates to: CSQSLQWGAPGWKGS*CCNPQSRHCQGCAF
Trigger: AAAAGCACAGCCCTGACAGTGCCTGCTCTGTGGATTACAGCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 90 bp TCTCCCCAACAGAGATACTGCGGGATATCTTGGCCATGGAACTGGTaGTGGGGTTCTGATAGGAGTGAGGCCGAGACGGACGGCCATCAG +
Preference number: 1 (lower is better)
Translates to: SPQQRYCGISWPWNW*WGSDRSEAETDGHQ
Trigger: CTGATGGCCGTCCGTCTCGGCCTCACTCCTATCAGAACCCCACCACCAGTTCCATGGCCAAGATATCCCGCAGTATCTCTGTTGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 90 bp GGTTCTCCCCAACAGAGATACTGCGGGATATCTTGGCCATGGAACTaGTGGTGGGGTTCTGATAGGAGTGAGGCCGAGACGGACGGCCAT +
Preference number: 1 (lower is better)
Translates to: GSPQQRYCGISWPWN*WWGSDRSEAETDGH
Trigger: ATGGCCGTCCGTCTCGGCCTCACTCCTATCAGAACCCCACCACCAGTTCCATGGCCAAGATATCCCGCAGTATCTCTGTTGGGGAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 90 bp CCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGTGTCCGTGTaGACTGCACTCCATCTCCAGACTTCTGCGCAGTGCGGAAGTAGA +
Preference number: 1 (lower is better)
Translates to: PCHRGSSSAPRGVSV*TALHLQTSAQCGSR
Trigger: TCTACTTCCGCACTGCGCAGAAGTCTGGAGATGGAGTGCAGTTCACACGGACACACCACGTGGTGCGGAAGACGACCCTCTATGACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 90 bp CAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTTTaGGGAGGCTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCT +
Preference number: 1 (lower is better)
Translates to: QTPVSSTPVGAQHCL*GGSFYLNQVSYGLS
Trigger: AGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAGCCTCCTCAAAGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR TCA 90 bp CTCTTCTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTaGGGAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTC +
Preference number: 1 (lower is better)
Translates to: LFFLFFITLSWLFKV*GDAIHTEGLRALRV
Trigger: GACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 90 bp TTTTCATTCTGGCTAGTGAGTGAAGTCTCAAGGGCCTCCTGCCCATaGTTCCTGGGACCAGATGGGATGATGGCCAGCGAGTCCTGGCTA +
Preference number: 1 (lower is better)
Translates to: FSFWLVSEVSRASCP*FLGPDGMMASESWL
Trigger: TAGCCAGGACTCGCTGGCCATCATCCCATCTGGTCCCAGGAAGCATGGGCAGGAGGCCCTTGAGACTTCACTCACTAGCCAGAATGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 90 bp AAGATGACAAAGACCCAAGACCTGTCCCTGCCACTGGAGGGGCTGTaGAGGCAGGAGTTCCAAGGAAGTGAGGCAACAGTCAGGGAAATA +
Preference number: 1 (lower is better)
Translates to: KMTKTQDLSLPLEGL*RQEFQGSEATVREI
Trigger: TATTTCCCTGACTGTTGCCTCACTTCCTTGGAACTCCTGCCTCCACAGCCCCTCCAGTGGCAGGGACAGGTCTTGGGTCTTTGTCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR CCA 90 bp TGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATaGGTGCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTG +
Preference number: 1 (lower is better)
Translates to: WWGCHSAPGRQYHLQ*VQVPDLGQRPLPLV
Trigger: CACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 90 bp GGGCAGAGGGGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTaGGACAGGCTTCCAGAACTCAGAGTTTGCGTTCCATACGCCGTT +
Preference number: 1 (lower is better)
Translates to: GQRGCSLESLEHSFT*DRLPELRVCVPYAV
Trigger: AACGGCGTATGGAACGCAAACTCTGAGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 90 bp ACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTaGAGTAATTTCAAATGGCTTCTAAGAGAGGGCCAGCCCTTCCCA +
Preference number: 1 (lower is better)
Translates to: TPEYPVYAPPQGANP*SNFKWLLREGQPFP
Trigger: TGGGAAGGGCTGGCCCTCTCTTAGAAGCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR CCA 90 bp AGACAGCCACTGATTAGTAGGATCAAAGGTCAAGGCAATGGTGTCTaGATACCTGGCATTCGCCACTCCAGAGAAGAGGCGACTGGCCTC +
Preference number: 1 (lower is better)
Translates to: RQPLISRIKGQGNGV*IPGIRHSREEATGL
Trigger: GAGGCCAGTCGCCTCTTCTCTGGAGTGGCGAATGCCAGGTATCCAGACACCATTGCCTTGACCTTTGATCCTACTAATCAGTGGCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR GCA 90 bp CTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACTCAGAGTTTaGGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGT +
Preference number: 1 (lower is better)
Translates to: LEHSFTWDRLPELRV*VPYAVPRLEATVLS
Trigger: ACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACGCAAACTCTGAGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 90 bp CCACACTCCAGACGCAGGAAGAATGATACAGAGCCGAGTACACCTTaGCCACTTTCTTGGGGTCCCTCACATCCCAAACATAAATGCTAT +
Preference number: 1 (lower is better)
Translates to: PHSRRRKNDTEPSTP*PLSWGPSHPKHKCY
Trigger: ATAGCATTTATGTTTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAGGTGTACTCGGCTCTGTATCATTCTTCCTGCGTCTGGAGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR CCA 90 bp GCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTaGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCCTGATAGG +
Preference number: 1 (lower is better)
Translates to: AISYQLGCGHQESRI*VHLVYCTPFLLPDR
Trigger: CCTATCAGGGAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR GCA 90 bp ATGAGTGTGCCGTCCTCACCCTGTGACCCTTTAAACAGCTTCTTCTaGTTTCCACTGCTGATGTTAAATATCCGAATATTTCGGTCCTGG +
Preference number: 1 (lower is better)
Translates to: MSVPSSPCDPLNSFF*FPLLMLNIRIFRSW
Trigger: CCAGGACCGAAATATTCGGATATTTAACATCAGCAGTGGAAAGCAGAAGAAGCTGTTTAAAGGGTCACAGGGTGAGGACGGCACACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGAGTAGCTCCCTCCTCGTaGAGGACCTGGCCCAGAGGG +
Preference number: 2 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRVAPSS*RTWPRG
Trigger: CCCTCTGGGCCAGGTCCTTCACGAGGAGGGAGCTAC...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR TCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGAACTCCTAACCTCAGGTaGTCCACCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRTPNLR*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACCTGAGGTTAGGAGT...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR TCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGCAAGCGCACTCAGGCTaGTGCCCCGGAGCTGGGAAC +
Preference number: 2 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGQAHSG*CPGAGN
Trigger: GTTCCCAGCTCCGGGGCATCAGCCTGAGTGCGCTTG...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CAA 90 bp CTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTCCTaGCTGCTTGCCGCCCCGCTGACGCTGGCGCAACTCGGCCAGACG +
Preference number: 2 (lower is better)
Translates to: LVPVGSRSPLGRGWS*LLAAPLTLAQLGQT
Trigger: CGTCTGGCCGAGTTGCGCCAGCGTCAGCGGGGCGGCAAGCAGCAAGGACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGTGGGGAAAACCACCCTaGTCTGGCAGCCACGGGAGT +
Preference number: 2 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGWGKPP*SGSHGS
Trigger: ACTCCCGTGGCTGCCAGAGCAGGGTGGTTTTCCCCA...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CAA 90 bp GGGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATaGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACC +
Preference number: 2 (lower is better)
Translates to: GLPEDGSTSGGAPGG*APLPLGCSPDACGT
Trigger: GGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGAAGGGCCAGATGGCTCTaGCTTTCTGAGCTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRRARWL*LSELQV
Trigger: TACCTGGAGCTCAGAAAGGCAGAGCCATCTGGCCCT...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGAACCTCCCGAGTAGCTaGGATTACAGGCGCCCACCA +
Preference number: 2 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGNLPSS*DYRRPP
Trigger: TGGTGGGCGCCTGTAATCCCAGCTACTCGGGAGGTT...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR TCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGGGGGCTCTCGTGGCCTaGAGCTGTGGTAAAGCTGCT +
Preference number: 2 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMGALVA*SCGKAA
Trigger: AGCAGCTTTACCACAGCTTCAGGCCACGAGAGCCCC...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR GCA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCATGGTCCTTGCTGCTTaGCGCCCCGCTGACGCTGGC +
Preference number: 2 (lower is better)
Translates to: APLPLGCSPDACGTWAGLMVLAA*RPADAG
Trigger: GCCAGCGTCAGCGGGGCGGCAAGCAGCAAGGACCAT...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGTGCTTGCCGCCCCGCTaGCGCTGGCGCAACTCGGCC +
Preference number: 2 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQCLPPR*RWRNSA
Trigger: GGCCGAGTTGCGCCAGCGTCAGCGGGGCGGCAAGCA...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGCCTCAACTCTTCAACTaGCTCACGACATGGTCCCAC +
Preference number: 2 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGPQLFN*LTTWSH
Trigger: GTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGG...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGGAGGGAGAATGGGAGTaGAATGTGCGGGCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMEGEWE*NVRAQV
Trigger: GACCTGAGCCCGCACATTCCACTCCCATTCTCCCTC...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCTGCAGCTCGGCCACCTaGCTGTGCTCTGCCACGTCC +
Preference number: 2 (lower is better)
Translates to: MREPVQETALMGPGAGWVCSSAT*LCSATS
Trigger: GGACGTGGCAGAGCACAGCCAGGTGGCCGAGCTGCA...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CCA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGCTGCACTGGGGCCCCTaGAGCAGCTCCACTGGCCAG +
Preference number: 2 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGLHWGP*SSSTGQ
Trigger: CTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAG...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGGAGTTCCAAGGAAGTaGGGCAACAGTCAGGGAAAT +
Preference number: 2 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGGVPRK*GNSQGN
Trigger: ATTTCCCTGACTGTTGCCTCACTTCCTTGGAACTCC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR TCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGAGGCCCACAGTTGGCTaGCGGGCACTGAATACCACA +
Preference number: 2 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVRPTVG*RALNTT
Trigger: TGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCT...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR TCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGCACGTGCATGCGTGTaGTCTCATCTGTGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVARACV*SHLWLR
Trigger: CCTCAGCCACAGATGAGATCACACGCATGCACGTGC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR TCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTGCAGCCCTGAGGACGTaGTGCAGAAGGTACTGTCCG +
Preference number: 2 (lower is better)
Translates to: LGPALGPLEQLHWPESQSAALRT*CRRYCP
Trigger: CGGACAGTACCTTCTGCATCACGTCCTCAGGGCTGC...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR GCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTCACACACCGAGCGGATaGCCACGCGGGGATCCAACA +
Preference number: 2 (lower is better)
Translates to: DHPELRSPETAVRLVKGPHTPSG*PRGDPT
Trigger: TGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCGCCCATAGGGGCCCATaGCTCCCTCCTCTTCTTCCT +
Preference number: 2 (lower is better)
Translates to: SPETAVRLVKGPADWPHVAHRGP*LPPLLP
Trigger: AGGAAGAAGAGGAGGGAGGCATGGGCCCCTATGGGC...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTGCCCATAGGGGCCCATaGCTCCCTCCTCTTCTTCCT +
Preference number: 2 (lower is better)
Translates to: LGPALGPLEQLHWPESQSAHRGP*LPPLLP
Trigger: AGGAAGAAGAGGAGGGAGGCATGGGCCCCTATGGGC...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGGCTCCAGCAGCCGGCTaGGGTCCAGGGTGGAGGACA +
Preference number: 2 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLAPAAG*GPGWRT
Trigger: TGTCCTCCACCCTGGACCCCAGCCGGCTGCTGGAGC...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTCCTTTGGGGAGAGGATaGTCCTTGCTGCTTGCCGCC +
Preference number: 2 (lower is better)
Translates to: LGPALGPLEQLHWPESQSPLGRG*SLLLAA
Trigger: GGCGGCAAGCAGCAAGGACCATCCTCTCCCCAAAGG...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCGGGCCTGGTGCCGGTTaGGTCCAGAAGCCCTTTGGG +
Preference number: 2 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCGPGAG*VQKPFG
Trigger: CCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCC...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATCGACTCATCTCCCAGTaGGACAGGCTTCGGGGCAAA +
Preference number: 2 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHRLISQ*DRLRGK
Trigger: TTTGCCCCGAAGCCTGTCCCACTGGGAGATGAGTCG...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGTTGGCTGCAGGAGCTaGGTCCAGGAACCCCACGGA +
Preference number: 2 (lower is better)
Translates to: DHPELRSPETAVRLVKGPVGCRS*VQEPHG
Trigger: TCCGTGGGGTTCCTGGACCCAGCTCCTGCAGCCAAC...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCAGGGTCCTGCAGGCTTaGGGCCAGTGTTTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: APLPLGCSPDACGTWAGLRVLQA*GQCFQL
Trigger: CAGCTGGAAACACTGGCCCCAAGCCTGCAGGACCCT...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCATGGCCAGCGAGTCCTaGCTAGGGTCCTGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: APGGLAPLPLGCSPDACGMASES*LGSCRL
Trigger: AAGCCTGCAGGACCCTAGCCAGGACTCGCTGGCCAT...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGAGGCTGCTTTGCCTCTaGACACTGCTCCCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVRLLCL*TLLPAF
Trigger: GAAAGCAGGGAGCAGTGTTCAGAGGCAAAGCAGCCT...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR TCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCTGGGACCAGATGGGATaGTGGCCAGCGAGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCWDQMG*WPASPG
Trigger: GCCAGGACTCGCTGGCCATCATCCCATCTGGTCCCA...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp CACACACCGAGCGGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCGCACGGCAGGCATGTaGCCACTCTCTCCAGTGACC +
Preference number: 2 (lower is better)
Translates to: HTPSGCPRGDPTGMHQLCRTAGM*PLSPVT
Trigger: GGTCACTGGAGAGAGTGGGCACATGCCTGCCGTGCG...ACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR GCA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGATCGGCCACCTGGCTGTaGTCTGCCACGTCCCAAACC +
Preference number: 2 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRSATWL*SATSQT
Trigger: GGTTTGGGACGTGGCAGAGCACAGCCAGGTGGCCGA...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR GCA 90 bp CCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTGCTGCTGTTCGTCCAGCGTCTaGTGTAGGCTGTACTCCCGC +
Preference number: 2 (lower is better)
Translates to: PCSQSLQWGAPGWKGSCCCSSSV*CRLYSR
Trigger: GCGGGAGTACAGCCTACAGCAGACGCTGGACGAACA...GCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGCTGGAGTCTGGGGGCTaGCCTCCTGTAGCCCATAGG +
Preference number: 2 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGLESGG*PPVAHR
Trigger: CCTATGGGCTACAGGAGGGCAGCCCCCAGACTCCAG...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCCTGCCTGGCGCACGCTaGCGCGGAGCTCTGCCACCA +
Preference number: 2 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSLPGAR*RGALPP
Trigger: TGGTGGCAGAGCTCCGCGGCAGCGTGCGCCAGGCAG...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGCTGATGCCCCGGAGCTaGGAACCTTTTGTAACCCTT +
Preference number: 2 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMLMPRS*EPFVTL
Trigger: AAGGGTTACAAAAGGTTCCCAGCTCCGGGGCATCAG...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATAGGCCAGTGCCTTCTTaGTACTCTTGGCAAGGACGG +
Preference number: 2 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHRPVPS*YSWQGR
Trigger: CCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCT...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGGGGGCAAAGCTGGGCTaGGGACCGAGGCCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQGAKLG*GPRPVP
Trigger: AGGCACTGGCCTCGGTCCCCAGCCCAGCTTTGCCCC...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTTCTTCTTCTGGGTCCTaGGTTGGCTGCAGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: LGPALGPLEQLHWPESQSSSSGS*VGCRSW
Trigger: CCAGCTCCTGCAGCCAACCCAGGACCCAGAAGAAGA...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCAGGCTGCTTTGCCTCTaGACACTGCTCCCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: APGGLAPLPLGCSPDACGRLLCL*TLLPAF
Trigger: GAAAGCAGGGAGCAGTGTTCAGAGGCAAAGCAGCCT...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCTCCAGGCCCACACGTTaGCGATCATGTCATGCTGGT +
Preference number: 2 (lower is better)
Translates to: SPETAVRLVKGPADWPHVSRPTR*RSCHAG
Trigger: ACCAGCATGACATGATCGTCAACGTGTGGGCCTGGA...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR TCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCAAAGCCTTCGATCACTaGACTCGCACAGCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: APGGLAPLPLGCSPDACGKAFDH*TRTAAL
Trigger: CAGGGCTGCTGTGCGAGTTCAGTGATCGAAGGCTTT...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR TCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCGACGCTGCCTCATGCTaGTGGTCATCTCAGAGCTCA +
Preference number: 2 (lower is better)
Translates to: SPETAVRLVKGPADWPHVDAASC*WSSQSS
Trigger: TGAGCTCTGAGATGACCATCAGCATGAGGCAGCGTC...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCCTGAACACTGCTCCCTaGTTTCCACTCCAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVLNTAP*FPLQAA
Trigger: GGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAG...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCAGCGGCTGGGAAGGCTaGTTTGCCTCTGAACACTGC +
Preference number: 2 (lower is better)
Translates to: MREPVQETALMGPGAGWVSGWEG*FASEHC
Trigger: GCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGCCGCT...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTCCATACTTGTGCTCCTaGAGCTCGGCCACCTGGCTG +
Preference number: 2 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGPYLCS*SSATWL
Trigger: CAGCCAGGTGGCCGAGCTGCAGGAGCACAAGTATGG...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR GCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTGGCTGGAAAGGCAGCTaGTGCTGTAATCCACAGAGC +
Preference number: 2 (lower is better)
Translates to: LGPALGPLEQLHWPESQSGWKGS*CCNPQS
Trigger: GCTCTGTGGATTACAGCAGCAGCTGCCTTTCCAGCC...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp ATACGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGTGGAGGGTGGAGCCATaGACCCCGGAGCTCTCTGTG +
Preference number: 2 (lower is better)
Translates to: IRSPDARCCPLGLTHTERWRVEP*TPELSV
Trigger: CACAGAGAGCTCCGGGGTGCATGGCTCCACCCTCCA...CCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512970.5
3UTR-3UTR CCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGCTGAGCTCCAGGTATTaGGGAAAACCACCCTGCTCT +
Preference number: 2 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVLSSRY*GKPPCS
Trigger: AGAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAG...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTTGGCTGGGGACACCCTaGAGGGCCAGATGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGWLGTP*RARWLC
Trigger: GCAGAGCCATCTGGCCCTCCAGGGTGTCCCCAGCCA...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCTGGCTGGGGACACCCTaGAGGGCCAGATGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSWLGTP*RARWLC
Trigger: GCAGAGCCATCTGGCCCTCCAGGGTGTCCCCAGCCA...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGAGGGAAATACAATGCTaGGCCCCTCTTGGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVREIQC*APLGGR
Trigger: TCTCCCTCCAAGAGGGGCCCAGCATTGTATTTCCCT...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTGGAGAAGGTGGCCTCTaGGCTCCAGCAGCCGGCTGG +
Preference number: 2 (lower is better)
Translates to: QQPARYSSNQHSTACCAGGEGGL*APAAGW
Trigger: CCAGCCGGCTGCTGGAGCCCAGAGGCCACCTTCTCC...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGTATCAGCTAGGCTGTaGACACCAAGAATCCAGAAT +
Preference number: 2 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGVSARL*TPRIQN
Trigger: ATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATAC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGAGTGGCCAAACATGGTaGCCACGCACTCGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGSGQTW*PRTRLR
Trigger: CCTCAGGCGAGTGCGTGGCCACCATGTTTGGCCACT...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTTGTTCCACAGGCGGATaGTGTTGTCTGAGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LGPALGPLEQLHWPESQSCSTGG*CCLRSR
Trigger: CCTGCTCCTCAGACAACACCATCCGCCTGTGGAACA...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512970.5
3UTR-3UTR CCA 90 bp ATACGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGTGTTTCGGTGGAGGGTaGAGCCATGCACCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: IRSPDARCCPLGLTHTERCFGGG*SHAPRS
Trigger: GCTCCGGGGTGCATGGCTCCACCCTCCACCGAAACA...CCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512970.5
3UTR-3UTR TCA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCGCTGTCCATTGGGGCTaGCACACACCGAGCGGATGC +
Preference number: 2 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPAVHWG*HTPSGC
Trigger: GCATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGC...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp CCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTGCTGCGGGATCCAACAGGGATaGATCAGCTTTGTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PCSQSLQWGAPGWKGSCCGIQQG*ISFVSS
Trigger: GGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCC...GCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCTCCCCTGATGCTAGATaGTGTCCATTGGGGCTGACA +
Preference number: 2 (lower is better)
Translates to: APLPLGCSPDACGTWAGLSPDAR*CPLGLT
Trigger: TGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGA...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCTGTTCGTCCAGCGTCTaGTGTAGGCTGTACTCCCGC +
Preference number: 2 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCCSSSV*CRLYSR
Trigger: GCGGGAGTACAGCCTACAGCAGACGCTGGACGAACA...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTGGCAAGGACGGGCAGTaGTGGAAGTTCTTCTTCAGT +
Preference number: 2 (lower is better)
Translates to: LGPALGPLEQLHWPESQSGKDGQ*WKFFFS
Trigger: ACTGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCC...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCGGGCGGGTCTGTACTTaGAACAGGAATCGTGAAGAG +
Preference number: 2 (lower is better)
Translates to: SPETAVRLVKGPADWPHVGRVCT*NRNREE
Trigger: CTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTGCTGCGTGACAATCTCTGAGTaGCCAAACATGGTGGCCACG +
Preference number: 2 (lower is better)
Translates to: PCSQSLQWGAPGWKGSCCVTISE*PNMVAT
Trigger: CGTGGCCACCATGTTTGGCCACTCAGAGATTGTCAC...GCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGGGTCCAGAAGCCCTTTaGGGAGAGGATGGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGGPEAL*GEDGPC
Trigger: GCAAGGACCATCCTCTCCCCAAAGGGCTTCTGGACC...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCAAGGACGGGCAGTGCTaGAAGTTCTTCTTCAGTCCC +
Preference number: 2 (lower is better)
Translates to: SPETAVRLVKGPADWPHVKDGQC*KFFFSP
Trigger: GGGACTGAAGAAGAACTTCCAGCACTGCCCGTCCTT...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTACTCACTGGTATCCATaGTGGGGTTGTCACTCGGCT +
Preference number: 2 (lower is better)
Translates to: LGPALGPLEQLHWPESQSTHWYP*WGCHSA
Trigger: AGCCGAGTGACAACCCCACCATGGATACCAGTGAGT...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGTGGGGTGCTCCGGGCTaGAAAGGCAGCTGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQWGAPG*KGSCCC
Trigger: ACAGCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCA...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGTCCAACACAGGCTTCTaGCTAAGCATCATTCAGGAT +
Preference number: 2 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMSNTGF*LSIIQD
Trigger: ATCCTGAATGATGCTTAGTCAGAAGCCTGTGTTGGA...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR TCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGTGCTTGCCGCCCCGCTaGCGCTGGCGCAACTCGGCC +
Preference number: 2 (lower is better)
Translates to: SVLATGIVKRYSETLTSLCLPPR*RWRNSA
Trigger: GGCCGAGTTGCGCCAGCGTCAGCGGGGCGGCAAGCA...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCCTGAACACTGCTCCCTaGTTTCCACTCCAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCLNTAP*FPLQAA
Trigger: GGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAG...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCTGGGGAAAACCACCCTaGTCTGGCAGCCACGGGAGT +
Preference number: 2 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSWGKPP*SGSHGS
Trigger: ACTCCCGTGGCTGCCAGAGCAGGGTGGTTTTCCCCA...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTAGGGCCAGATGGCTCTaGCTTTCTGAGCTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPRARWL*LSELQV
Trigger: TACCTGGAGCTCAGAAAGGCAGAGCCATCTGGCCCT...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGCTCAGAGAAGGACACTaGTGTCACCCGACTGGACAC +
Preference number: 2 (lower is better)
Translates to: RSPDARCCPLGLTHTERMLREGH*CHPTGH
Trigger: GTGTCCAGTCGGGTGACAGCAGTGTCCTTCTCTGAG...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR GCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCGATGTGTCGGTTGCCTaGAGTGACAAAGTAGCTGCA +
Preference number: 2 (lower is better)
Translates to: SPETAVRLVKGPADWPHVDVSVA*SDKVAA
Trigger: TGCAGCTACTTTGTCACTGCAGGCAACCGACACATC...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGGAGGGAGAATGGGAGTaGAATGTGCGGGCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLEGEWE*NVRAQV
Trigger: GACCTGAGCCCGCACATTCCACTCCCATTCTCCCTC...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCAGAATCTCAGAGTCATaGGCCTCCACCTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: APLPLGCSPDACGTWAGLRISES*ASTFSI
Trigger: GATGCTGAAGGTGGAGGCCCATGACTCTGAGATTCT...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATGGGGCAAAGCTGGGCTaGGGACCGAGGCCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDGAKLG*GPRPVP
Trigger: AGGCACTGGCCTCGGTCCCCAGCCCAGCTTTGCCCC...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCGCACTTGGAACTCACTaGTATCCATGGTGGGGTTGT +
Preference number: 2 (lower is better)
Translates to: APLPLGCSPDACGTWAGLALGTH*YPWWGC
Trigger: ACAACCCCACCATGGATACCAGTGAGTTCCAAGTGC...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTTTGGCTGACGGGCACTaGATACCACATCACCTCTCA +
Preference number: 2 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPLADGH*IPHHLS
Trigger: TGAGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAA...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCTCCAGGAGACAGCATTaGTGGGGCCTGGTGCCGGTT +
Preference number: 2 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSSRRQH*WGLVPV
Trigger: AACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGA...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCAGATGCCATCCACACTaGGGGGCTCCGTGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSRCHPH*GAPCSQ
Trigger: CTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCT...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGAGCTGCTGTCAGGGTTaGGACGGCATCGTGGCAACA +
Preference number: 2 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQSCCQG*DGIVAT
Trigger: TGTTGCCACGATGCCGTCTCAACCCTGACAGCAGCT...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGCTGAACACTGCTCCCTaGTTTCCACTCCAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLLNTAP*FPLQAA
Trigger: GGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAG...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCAGCGGCTGGGAAGGCTaGTTTGCCTCTGAACACTGC +
Preference number: 2 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPSGWEG*FASEHC
Trigger: GCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGCCGCT...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGCTAGATGGGGCAGGCTaGCCTCCTACCTCTCACAGC +
Preference number: 2 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGLDGAG*PPTSHS
Trigger: GCTGTGAGAGGTAGGAGGGCAGCCTGCCCCATCTAG...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR GCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACTGGGGAAAACCACCCTaGTCTGGCAGCCACGGGAGT +
Preference number: 2 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHWGKPP*SGSHGS
Trigger: ACTCCCGTGGCTGCCAGAGCAGGGTGGTTTTCCCCA...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCAACACTCAACAGCGTaGTGTGCAGGTAGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPQHSTA*CAGRCV
Trigger: CACACACCTACCTGCACAGCACGCTGTTGAGTGTTG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGGGGATCCAACAGGGATaGATCAGCTTTGTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: RSPDARCCPLGLTHTERMGIQQG*ISFVSS
Trigger: GGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCC...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCCTGATCATGCGGACTTaGCCATCACTGGCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCLIMRT*PSLAAN
Trigger: GTTTGCAGCCAGTGATGGGCAAGTCCGCATGATCAG...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCCCCACGAGGAGCGGCTaGGAAGGCTGCTTTGCCTCT +
Preference number: 2 (lower is better)
Translates to: CNRNREEILRDSDLSGTCPTRSG*EGCFAS
Trigger: AGAGGCAAAGCAGCCTTCCCAGCCGCTCCTCGTGGG...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCCCACTGGAGGGGCTGTaGAGGCAGGAGTTCCAAGGA +
Preference number: 2 (lower is better)
Translates to: RLLTKHHSGCREKVASGLPLEGL*RQEFQG
Trigger: TCCTTGGAACTCCTGCCTCCACAGCCCCTCCAGTGG...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGCCACGGGAGTGCAGCTaGTGTGAGAGGGGAAGTGCA +
Preference number: 2 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGPRECS*CERGSA
Trigger: TGCACTTCCCCTCTCACACCAGCTGCACTCCCGTGG...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGCCCTGGAGGGCCAGATaGCTCTGCCTTTCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGPWRAR*LCLSEL
Trigger: GAGCTCAGAAAGGCAGAGCCATCTGGCCCTCCAGGG...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACAAGTCTCCTGATGGCTaGGGACACCCTGGAGGGCCA +
Preference number: 2 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHKSPDG*GHPGGP
Trigger: TGGCCCTCCAGGGTGTCCCCAGCCATCAGGAGACTT...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTTATCCAGCACACCCGTaGGTGCCCAGCACTGCCTTT +
Preference number: 2 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGYPAHP*VPSTAF
Trigger: AAAGGCAGTGCTGGGCACCCACGGGTGTGCTGGATA...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGGTGACAATCTCTGAGTaGCCAAACATGGTGGCCACG +
Preference number: 2 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGVTISE*PNMVAT
Trigger: CGTGGCCACCATGTTTGGCCACTCAGAGATTGTCAC...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGCCTTTGGGGAGAGGATaGTCCTTGCTGCTTGCCGCC +
Preference number: 2 (lower is better)
Translates to: RNREEILRDSDLSGTCTGPLGRG*SLLLAA
Trigger: GGCGGCAAGCAGCAAGGACCATCCTCTCCCCAAAGG...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCGCAGGTTCCAGATCTTaGGCAAAGACCCCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCAGSRS*AKTPSS
Trigger: AGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGGATGCCTGTGGCACCTaGGCTGGTCTCGACATCAGT +
Preference number: 2 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQDACGT*AGLDIS
Trigger: ACTGATGTCGAGACCAGCCCAGGTGCCACAGGCATC...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CCATGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCGTGGTGTGTCCGTGTaGACTGCACTCCATCTCCAG +
Preference number: 2 (lower is better)
Translates to: PWWGCHSAPGRQYHLQWVRGVSV*TALHLQ
Trigger: CTGGAGATGGAGTGCAGTTCACACGGACACACCACG...CACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATCCCCAGACACAGAGATaGGATGTTTACAATCATTAC +
Preference number: 2 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHPQTQR*DVYNHY
Trigger: GTAATGATTGTAAACATCTCATCTCTGTGTCTGGGG...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCAGTTCCACACCTGGCTaGACCCAGCGCCCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSSSTPG*TQRPLL
Trigger: AAGAAGAGGGCGCTGGGTTCAGCCAGGTGTGGAACT...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACAGCACACCCGTGGGTaGCCAGCACTGCCTTTGAGG +
Preference number: 2 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEQHTRG*PALPLR
Trigger: CCTCAAAGGCAGTGCTGGGCACCCACGGGTGTGCTG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCGAGCCGAGTACACCTTaGCCACTTTCTTGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSEPSTP*PLSWGP
Trigger: GGGACCCCAAGAAAGTGGGCAAGGTGTACTCGGCTC...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACACACACCGAGCGGATaGCCACGCGGGGATCCAACA +
Preference number: 2 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEHTPSG*PRGDPT
Trigger: TGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCTTGCCCATCACTGGCTaGAAACTTAACAGCAGTGAT +
Preference number: 2 (lower is better)
Translates to: SPETAVRLVKGPADWPHVLPITG*KLNSSD
Trigger: ATCACTGCTGTTAAGTTTGCAGCCAGTGATGGGCAA...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGCAGACTTCTGCGCAGTaGGGAAGTAGATGCTCTTGT +
Preference number: 2 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGQTSAQ*GSRCSC
Trigger: ACAAGAGCATCTACTTCCGCACTGCGCAGAAGTCTG...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCTGTGTCCGTGTGAACTaGACTCCATCTCCAGACTTC +
Preference number: 2 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCCVRVN*TPSPDF
Trigger: GAAGTCTGGAGATGGAGTGCAGTTCACACGGACACA...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGAGAGGGGCTGCAGTTTaGAATCGCTGGAGCATTCAT +
Preference number: 2 (lower is better)
Translates to: RSPDARCCPLGLTHTERMRGAAV*NRWSIH
Trigger: ATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCT...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACCCACGAGGAGCGGCTaGGAAGGCTGCTTTGCCTCT +
Preference number: 2 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEPTRSG*EGCFAS
Trigger: AGAGGCAAAGCAGCCTTCCCAGCCGCTCCTCGTGGG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
3UTR-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCCCCACGAGGAGCGGCTaGGAAGGCTGCTTTGCCTCT +
Preference number: 2 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFPTRSG*EGCFAS
Trigger: AGAGGCAAAGCAGCCTTCCCAGCCGCTCCTCGTGGG...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGTCCCAGATTCCTAGATaGGGCAGGCTGCCCTCCTAC +
Preference number: 2 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGSQIPR*GRLPSY
Trigger: GTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGA...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACTCCCAGATTCCTAGATaGGGCAGGCTGCCCTCCTAC +
Preference number: 2 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHSQIPR*GRLPSY
Trigger: GTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGA...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTCTCTTGGAGGGAGAATaGGAGTGGAATGTGCGGGCT +
Preference number: 2 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGLLEGE*EWNVRA
Trigger: AGCCCGCACATTCCACTCCCATTCTCCCTCCAAGAG...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CAA 90 bp TCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTTaGAGGAGGCTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATC +
Preference number: 2 (lower is better)
Translates to: SNSSIQHTRGCPALP*RRLLLPKPGVLWAI
Trigger: GATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAGCCTCCTCAAAGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR CAA 90 bp GGGGCAGAGGGGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTaGGGACAGGCTTCCAGAACTCAGAGTTTGCGTTCCATACGCCGT +
Preference number: 2 (lower is better)
Translates to: GAEGLQFGIAGAFIH*GQASRTQSLRSIRR
Trigger: ACGGCGTATGGAACGCAAACTCTGAGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CCATGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGAGGCTGCTTTGCCTCTaGACACTGCTCCCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: PWWGCHSAPGRQYHLQWVRLLCL*TLLPAF
Trigger: GAAAGCAGGGAGCAGTGTTCAGAGGCAAAGCAGCCT...CACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGGAGTTCCAAGGAAGTaGGGCAACAGTCAGGGAAAT +
Preference number: 2 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPGVPRK*GNSQGN
Trigger: ATTTCCCTGACTGTTGCCTCACTTCCTTGGAACTCC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCTTGGCTGACGGGCACTaGATACCACATCACCTCTCA +
Preference number: 2 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSLADGH*IPHHLS
Trigger: TGAGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAA...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTTCATGTTTGCCCAGGTaGGGGCTTACTGTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: QQPARYSSNQHSTACCAGSCLPR*GLTVLQ
Trigger: CTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGA...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCCCCCAGACACAGAGATaGGATGTTTACAATCATTAC +
Preference number: 2 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVPQTQR*DVYNHY
Trigger: GTAATGATTGTAAACATCTCATCTCTGTGTCTGGGG...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCAAGAGAAGGTGTCTCTaGGGAGCTGGGCAATCCGAC +
Preference number: 2 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSKRRCL*GAGQSD
Trigger: GTCGGATTGCCCAGCTCCTCAGAGACACCTTCTCTT...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTCACAGGGAAATACAATaGTGGGCCCCTCTTGGAGGG +
Preference number: 2 (lower is better)
Translates to: QQPARYSSNQHSTACCAGHREIQ*WAPLGG
Trigger: CCCTCCAAGAGGGGCCCAGCATTGTATTTCCCTGTG...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACCACAGGGAAATACAATaGTGGGCCCCTCTTGGAGGG +
Preference number: 2 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHHREIQ*WAPLGG
Trigger: CCCTCCAAGAGGGGCCCAGCATTGTATTTCCCTGTG...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCAAGCATCATTCAGGATaGAGGGAGAAGGTGGCCTCT +
Preference number: 2 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPKHHSG*REKVAS
Trigger: AGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTT...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGAGCAGTTTGGAATCGCTaGAGCATTCATTCACTTGGG +
Preference number: 2 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRAVWNR*SIHSLG
Trigger: CCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGC...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGGCAGTTTGGAATCGCTaGAGCATTCATTCACTTGGG +
Preference number: 2 (lower is better)
Translates to: RSPDARCCPLGLTHTERMAVWNR*SIHSLG
Trigger: CCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGC...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACCCACGAGGAGCGGCTaGGAAGGCTGCTTTGCCTCT +
Preference number: 2 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSPTRSG*EGCFAS
Trigger: AGAGGCAAAGCAGCCTTCCCAGCCGCTCCTCGTGGG...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACGTGAAGGCCCACAGTTaGCTGACGGGCACTGAATAC +
Preference number: 2 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDVKAHS*LTGTEY
Trigger: GTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCAC...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGCTCTTGGAGGGAGAATaGGAGTGGAATGTGCGGGCT +
Preference number: 2 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGLLEGE*EWNVRA
Trigger: AGCCCGCACATTCCACTCCCATTCTCCCTCCAAGAG...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCCTGCTGTCACCCGACTaGACACCTTGTTGGAGGCCA +
Preference number: 2 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFLLSPD*TPCWRP
Trigger: TGGCCTCCAACAAGGTGTCCAGTCGGGTGACAGCAG...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CCA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGACAAGGCAATGGTGTCTaGATACCTGGCATTCGCCAC +
Preference number: 2 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGQGNGV*IPGIRH
Trigger: GTGGCGAATGCCAGGTATCCAGACACCATTGCCTTG...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCAGCATTGATGGGGCCTaGTGCCGGTTGGGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: CNRNREEILRDSDLSGTCSIDGA*CRLGPE
Trigger: TTCTGGACCCAACCGGCACCAGGCCCCATCAATGCT...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTCAATACCATCTTCAATaGGTGCAGGTTCCAGATCTT +
Preference number: 2 (lower is better)
Translates to: LGPALGPLEQLHWPESQSQYHLQ*VQVPDL
Trigger: AAGATCTGGAACCTGCACCCATTGAAGATGGTATTG...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CAA 90 bp CAATCCTCAGAGAAGGACACTGCTGTCACCCGACTGGACACCTTGTaGGAGGCCACCACAATGTTTTTCTTCCAGGCCCACACGTTGACG +
Preference number: 2 (lower is better)
Translates to: QSSEKDTAVTRLDTL*EATTMFFFQAHTLT
Trigger: CGTCAACGTGTGGGCCTGGAAGAAAAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTCGGGTGACAGCAGTGTCCTTCTCTGAGGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR TCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGGAGTTCCAAGGAAGTaGGGCAACAGTCAGGGAAAT +
Preference number: 2 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGGVPRK*GNSQGN
Trigger: ATTTCCCTGACTGTTGCCTCACTTCCTTGGAACTCC...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR TCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTCTCACAGCACCAAGATaGCAAAGACCCAAGACCTGT +
Preference number: 2 (lower is better)
Translates to: STPEYPVYAPPQGANPCSLTAPR*QRPKTC
Trigger: ACAGGTCTTGGGTCTTTGTCATCTTGGTGCTGTGAG...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCTCACAGCACCAAGATaGCAAAGACCCAAGACCTGT +
Preference number: 2 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSLTAPR*QRPKTC
Trigger: ACAGGTCTTGGGTCTTTGTCATCTTGGTGCTGTGAG...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTTTGGCTGACGGGCACTaGATACCACATCACCTCTCA +
Preference number: 2 (lower is better)
Translates to: QQPARYSSNQHSTACCAGLADGH*IPHHLS
Trigger: TGAGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAA...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTGATCTCATCTGTGGCTaGGGTCCTCAGGAGGTAGGC +
Preference number: 2 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPDLICG*GPQEVG
Trigger: GCCTACCTCCTGAGGACCTCAGCCACAGATGAGATC...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGTCGGTTGCCTGCAGTaGCAAAGTAGCTGCAATCCT +
Preference number: 2 (lower is better)
Translates to: RNREEILRDSDLSGTCTGVGCLQ*QSSCNP
Trigger: AGGATTGCAGCTACTTTGTCACTGCAGGCAACCGAC...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR TCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGAGTGGCATTCACCTTTaGGGTCTTGCTGTCATCGAG +
Preference number: 2 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQSGIHL*GLAVIE
Trigger: CTCGATGACAGCAAGACCTCAAAGGTGAATGCCACT...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR TCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCGGCAATGTAGATCCCTaGGGGGTCTGTCTGCACCTT +
Preference number: 2 (lower is better)
Translates to: CNRNREEILRDSDLSGTCGNVDP*GVCLHL
Trigger: AAGGTGCAGACAGACCCCTCAGGGATCTACATTGCC...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACGGCCACGCACTCGCCTaGGGAGAAGTCAAAAATGGA +
Preference number: 2 (lower is better)
Translates to: GRVCTCNRNREEILRDSDGHALA*GEVKNG
Trigger: TCCATTTTTGACTTCTCCTCAGGCGAGTGCGTGGCC...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCCTCTCAGTTGTACTGTaGGCTTTTCCTAGGCCCACC +
Preference number: 2 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSLSVVL*AFPRPT
Trigger: GGTGGGCCTAGGAAAAGCTCACAGTACAACTGAGAG...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTAGCGGCTGGGAAGGCTaGTTTGCCTCTGAACACTGC +
Preference number: 2 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPSGWEG*FASEHC
Trigger: GCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGCCGCT...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCCTAGATGGGGCAGGCTaGCCTCCTACCTCTCACAGC +
Preference number: 2 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSLDGAG*PPTSHS
Trigger: GCTGTGAGAGGTAGGAGGGCAGCCTGCCCCATCTAG...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCCTAGATGGGGCAGGCTaGCCTCCTACCTCTCACAGC +
Preference number: 2 (lower is better)
Translates to: TLCMLHHRELIPAVISNGLDGAG*PPTSHS
Trigger: GCTGTGAGAGGTAGGAGGGCAGCCTGCCCCATCTAG...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGCACCTGGCTGTGCTCTaGCACGTCCCAAACCCGCAC +
Preference number: 2 (lower is better)
Translates to: SVLATGIVKRYSETLTSLHLAVL*HVPNPH
Trigger: GTGCGGGTTTGGGACGTGGCAGAGCACAGCCAGGTG...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR GCA 90 bp CCATGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGTGCGGAAGTAGATaGTCTTGTCTGCTCCACAGC +
Preference number: 2 (lower is better)
Translates to: PWWGCHSAPGRQYHLQWVQCGSR*SCLLHS
Trigger: GCTGTGGAGCAGACAAGAGCATCTACTTCCGCACTG...CACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGCAGACTTCTGCGCAGTaGGGAAGTAGATGCTCTTGT +
Preference number: 2 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQQTSAQ*GSRCSC
Trigger: ACAAGAGCATCTACTTCCGCACTGCGCAGAAGTCTG...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCTGGAAAGGCAGCTGCTaGTGTAATCCACAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSWKGSC*CNPQSR
Trigger: CCTGCTCTGTGGATTACAGCAGCAGCTGCCTTTCCA...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGAGAGGGGCTGCAGTTTaGAATCGCTGGAGCATTCAT +
Preference number: 2 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGERGAAV*NRWSIH
Trigger: ATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCT...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
3UTR-3UTR CCA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATACCCACGAGGAGCGGCTaGGAAGGCTGCTTTGCCTCT +
Preference number: 2 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRIPTRSG*EGCFAS
Trigger: AGAGGCAAAGCAGCCTTCCCAGCCGCTCCTCGTGGG...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGCCCTGGAGGGCCAGATaGCTCTGCCTTTCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLPWRAR*LCLSEL
Trigger: GAGCTCAGAAAGGCAGAGCCATCTGGCCCTCCAGGG...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACAGGGAAATACAATGCTaGGCCCCTCTTGGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHREIQC*APLGGR
Trigger: TCTCCCTCCAAGAGGGGCCCAGCATTGTATTTCCCT...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTAAACCAGGTGTCCTATaGGCTATCTCGTATCAGCTA +
Preference number: 2 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPKPGVL*AISYQL
Trigger: TAGCTGATACGAGATAGCCCATAGGACACCTGGTTT...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCTTTAGAAACTGCTCCTaGTCTGGAGTCTGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSFRNCS*SGVWGL
Trigger: CAGCCCCCAGACTCCAGACCAGGAGCAGTTTCTAAA...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CAA 90 bp GCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACTCAGAGTTaGCGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAG +
Preference number: 2 (lower is better)
Translates to: AGAFIHLGQASRTQS*RSIRRSTARSNSSE
Trigger: CTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACGCAAACTCTGAGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAGGCTGCTTTGCCTCTaGACACTGCTCCCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFRLLCL*TLLPAF
Trigger: GAAAGCAGGGAGCAGTGTTCAGAGGCAAAGCAGCCT...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCAGGCCCACAGTTGGCTaGCGGGCACTGAATACCACA +
Preference number: 2 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSRPTVG*RALNTT
Trigger: TGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCT...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTAGGCCCACAGTTGGCTaGCGGGCACTGAATACCACA +
Preference number: 2 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCRPTVG*RALNTT
Trigger: TGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCT...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGCACGTGCATGCGTGTaGTCTCATCTGTGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLARACV*SHLWLR
Trigger: CCTCAGCCACAGATGAGATCACACGCATGCACGTGC...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCCAGACGCAGGAAGAATaGTACAGAGCCGAGTACACC +
Preference number: 2 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFQTQEE*YRAEYT
Trigger: GGTGTACTCGGCTCTGTATCATTCTTCCTGCGTCTG...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR GCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCAGCGGCTGGGAAGGCTaGTTTGCCTCTGAACACTGC +
Preference number: 2 (lower is better)
Translates to: TLCMLHHRELIPAVISNGSGWEG*FASEHC
Trigger: GCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGCCGCT...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGGAGGGCTTACTGTCCTaGAGCAACATCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWEGLLS*SNIPQL
Trigger: CAGCTGTGGGATGTTGCTGCAGGACAGTAAGCCCTC...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCCAGTGCGGAAGTAGATaGTCTTGTCTGCTCCACAGC +
Preference number: 2 (lower is better)
Translates to: CNRNREEILRDSDLSGTCQCGSR*SCLLHS
Trigger: GCTGTGGAGCAGACAAGAGCATCTACTTCCGCACTG...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGAGAGGGGCTGCAGTTTaGAATCGCTGGAGCATTCAT +
Preference number: 2 (lower is better)
Translates to: RNREEILRDSDLSGTCTGRGAAV*NRWSIH
Trigger: ATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCT...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCCACTGGAGGGGCTGTaGAGGCAGGAGTTCCAAGGA +
Preference number: 2 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLPLEGL*RQEFQG
Trigger: TCCTTGGAACTCCTGCCTCCACAGCCCCTCCAGTGG...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTGTGAAGGCCCACAGTTaGCTGACGGGCACTGAATAC +
Preference number: 2 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPVKAHS*LTGTEY
Trigger: GTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCAC...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCCACGGGAGTGCAGCTaGTGTGAGAGGGGAAGTGCA +
Preference number: 2 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLPRECS*CERGSA
Trigger: TGCACTTCCCCTCTCACACCAGCTGCACTCCCGTGG...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCCCTGGAGGGCCAGATaGCTCTGCCTTTCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLPWRAR*LCLSEL
Trigger: GAGCTCAGAAAGGCAGAGCCATCTGGCCCTCCAGGG...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGCTCTTGGAGGGAGAATaGGAGTGGAATGTGCGGGCT +
Preference number: 2 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWLLEGE*EWNVRA
Trigger: AGCCCGCACATTCCACTCCCATTCTCCCTCCAAGAG...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGCAACATCCCACAGCTaGCTCAAGTTCTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEATSHS*LKFWPG
Trigger: TCCTGGCCAGAACTTGAGCCAGCTGTGGGATGTTGC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCAAGAATCCAGAATCTaGGTTCACTTAGTGTACTGC +
Preference number: 2 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPQESRI*VHLVYC
Trigger: GCAGTACACTAAGTGAACCCAGATTCTGGATTCTTG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATATCTGTCCCCAGAGCATaGGGTCGGGGCAAGGTGCTA +
Preference number: 2 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRISVPRA*GRGKVL
Trigger: TAGCACCTTGCCCCGACCCCATGCTCTGGGGACAGA...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGTCTTGTCAGAACAGCTaGTGGCAATGTAGATCCCTG +
Preference number: 2 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQSCQNS*WQCRSL
Trigger: CAGGGATCTACATTGCCACCAGCTGTTCTGACAAGA...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAATCTCAGAGTCTTCAGTaGGGTGCTCCGGGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: GCSLESLEHSFTWDRLPESQSLQ*GAPGWK
Trigger: TTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGA...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTAGGCTGCTTTGCCTCTaGACACTGCTCCCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGRLLCL*TLLPAF
Trigger: GAAAGCAGGGAGCAGTGTTCAGAGGCAAAGCAGCCT...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCGATCTCATCTGTGGCTaGGGTCCTCAGGAGGTAGGC +
Preference number: 2 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLDLICG*GPQEVG
Trigger: GCCTACCTCCTGAGGACCTCAGCCACAGATGAGATC...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCATCTCACTCAGGGACTaGAGTTCGTGCACCCTAAGT +
Preference number: 2 (lower is better)
Translates to: CNRNREEILRDSDLSGTCISLRD*SSCTLS
Trigger: ACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGAT...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCGCGGATGGTGTTGTCTaGGGAGCAGGTAATAAAGGA +
Preference number: 2 (lower is better)
Translates to: CNRNREEILRDSDLSGTCADGVV*GAGNKG
Trigger: TCCTTTATTACCTGCTCCTCAGACAACACCATCCGC...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512970.5
3UTR-3UTR GCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTGAACACTGCTCCCTaGTTTCCACTCCAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSLNTAP*FPLQAA
Trigger: GGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAG...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTGAGGGCTTACTGTCCTaGAGCAACATCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGEGLLS*SNIPQL
Trigger: CAGCTGTGGGATGTTGCTGCAGGACAGTAAGCCCTC...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCGAGGGCTTACTGTCCTaGAGCAACATCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSEGLLS*SNIPQL
Trigger: CAGCTGTGGGATGTTGCTGCAGGACAGTAAGCCCTC...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTCCAGAGCTTCATGTTTaGCCAGGTGAGGGCTTACTG +
Preference number: 2 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPPELHV*PGEGLL
Trigger: CAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGG...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGTCACCTTTGAGGTCTTaGTGTCATCGAGATACCAGA +
Preference number: 2 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQSPLRS*CHRDTR
Trigger: TCTGGTATCTCGATGACAGCAAGACCTCAAAGGTGA...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAATCCCCTGATGCTAGATaGTGTCCATTGGGGCTGACA +
Preference number: 2 (lower is better)
Translates to: GCSLESLEHSFTWDRLPESPDAR*CPLGLT
Trigger: TGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGA...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCGCAGTTTGGAATCGCTaGAGCATTCATTCACTTGGG +
Preference number: 2 (lower is better)
Translates to: RLLTKHHSGCREKVASGLAVWNR*SIHSLG
Trigger: CCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGC...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCAGTTTGGAATCGCTaGAGCATTCATTCACTTGGG +
Preference number: 2 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGAVWNR*SIHSLG
Trigger: CCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGC...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCTCCCAGATTCCTAGATaGGGCAGGCTGCCCTCCTAC +
Preference number: 2 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLSQIPR*GRLPSY
Trigger: GTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGA...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCCCACGGGAGTGCAGCTaGTGTGAGAGGGGAAGTGCA +
Preference number: 2 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFPRECS*CERGSA
Trigger: TGCACTTCCCCTCTCACACCAGCTGCACTCCCGTGG...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCAAGTCTCCTGATGGCTaGGGACACCCTGGAGGGCCA +
Preference number: 2 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFKSPDG*GHPGGP
Trigger: TGGCCCTCCAGGGTGTCCCCAGCCATCAGGAGACTT...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTAGGGAAATACAATGCTaGGCCCCTCTTGGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPREIQC*APLGGR
Trigger: TCTCCCTCCAAGAGGGGCCCAGCATTGTATTTCCCT...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAGTCTTCCGCACCACGTaGTGTGTCCGTGTGAACTGC +
Preference number: 2 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRIVFRTT*CVRVNC
Trigger: GCAGTTCACACGGACACACCACGTGGTGCGGAAGAC...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATCCGTGTACTTCCAGCTaGGCTCCACATCCATGTCAT +
Preference number: 2 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDPCTSS*APHPCH
Trigger: ATGACATGGATGTGGAGCCCAGCTGGAAGTACACGG...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCTCTTGTCAGAACAGCTaGTGGCAATGTAGATCCCTG +
Preference number: 2 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSSCQNS*WQCRSL
Trigger: CAGGGATCTACATTGCCACCAGCTGTTCTGACAAGA...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTGATCTCATCTGTGGCTaGGGTCCTCAGGAGGTAGGC +
Preference number: 2 (lower is better)
Translates to: YILTYPLTSATYLSHLPLDLICG*GPQEVG
Trigger: GCCTACCTCCTGAGGACCTCAGCCACAGATGAGATC...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGCACGTGCATGCGTGTaGTCTCATCTGTGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFARACV*SHLWLR
Trigger: CCTCAGCCACAGATGAGATCACACGCATGCACGTGC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGCCCAGCACTGCCTTTaGGGAGGCTCCTTCTACCTA +
Preference number: 2 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFAQHCL*GGSFYL
Trigger: TAGGTAGAAGGAGCCTCCTCAAAGGCAGTGCTGGGC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAACTGCACCCCTTTTCTaGTCCCTGATAGGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: GCSLESLEHSFTWDRLPETAPLF*SLIGVP
Trigger: TGGAACACCTATCAGGGAGCAGAAAAGGGGTGCAGT...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATTGTGTCCGTGTGAACTaGACTCCATCTCCAGACTTC +
Preference number: 2 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDCVRVN*TPSPDF
Trigger: GAAGTCTGGAGATGGAGTGCAGTTCACACGGACACA...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCGACTGGACACCTTGTTaGAGGCCACCACAATGTTTT +
Preference number: 2 (lower is better)
Translates to: CNRNREEILRDSDLSGTCDWTPC*RPPQCF
Trigger: AAAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTC...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CCA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGTGCAGTGGGCCACTGTaGTCCTCAGCTCCACCCACT +
Preference number: 2 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWCSGPL*SSAPPT
Trigger: AGTGGGTGGAGCTGAGGACCACAGTGGCCCACTGCA...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CCA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCCAAAGGTCAAGGCAATaGTGTCTGGATACCTGGCAT +
Preference number: 2 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFQRSRQ*CLDTWH
Trigger: ATGCCAGGTATCCAGACACCATTGCCTTGACCTTTG...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACTCATGTCTTTCCTGTaGCACCAGACTGTGCACAGA +
Preference number: 2 (lower is better)
Translates to: GCSLESLEHSFTWDRLPELMSFL*HQTVHR
Trigger: TCTGTGCACAGTCTGGTGCCACAGGAAAGACATGAG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGCTCACAGCACCAAGATaGCAAAGACCCAAGACCTGT +
Preference number: 2 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLLTAPR*QRPKTC
Trigger: ACAGGTCTTGGGTCTTTGTCATCTTGGTGCTGTGAG...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCCTGAACACTGCTCCCTaGTTTCCACTCCAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFLNTAP*FPLQAA
Trigger: GGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAG...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGCAGGGAGCTAATCCCTaGAGTAATTTCAAATGGCTT +
Preference number: 2 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGQGANP*SNFKWL
Trigger: AAGCCATTTGAAATTACTGCAGGGATTAGCTCCCTG...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR-3UTR GCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTAGGGCCAGATGGCTCTaGCTTTCTGAGCTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: YILTYPLTSATYLSHLPLRARWL*LSELQV
Trigger: TACCTGGAGCTCAGAAAGGCAGAGCCATCTGGCCCT...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGAAGCATCATTCAGGATaGAGGGAGAAGGTGGCCTCT +
Preference number: 2 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLKHHSG*REKVAS
Trigger: AGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTT...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTACTGCACCCCTTTTCTaGTCCCTGATAGGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGTAPLF*SLIGVP
Trigger: TGGAACACCTATCAGGGAGCAGAAAAGGGGTGCAGT...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTAGAGGGGCTGCAGTTTaGAATCGCTGGAGCATTCAT +
Preference number: 2 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCRGAAV*NRWSIH
Trigger: ATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCT...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTTGCAGTAATTTCAAATaGCTTCTAAGAGAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: QQPARYSSNQHSTACCAGCSNFK*LLREGQ
Trigger: CTGGCCCTCTCTTAGAAGCCATTTGAAATTACTGCA...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCTGAGCTCCAGGTATTaGGGAAAACCACCCTGCTCT +
Preference number: 2 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLLSSRY*GKPPCS
Trigger: AGAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAG...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAATCCAACACAGGCTTCTaGCTAAGCATCATTCAGGAT +
Preference number: 2 (lower is better)
Translates to: GCSLESLEHSFTWDRLPESNTGF*LSIIQD
Trigger: ATCCTGAATGATGCTTAGTCAGAAGCCTGTGTTGGA...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR TCA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATACGAGATACCAGAATTTaGTGTGTCGGTTGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRIRDTRI*CVGCLQ
Trigger: CTGCAGGCAACCGACACATCAAATTCTGGTATCTCG...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR TCA 90 bp CTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATACACAAGACAGCCACTaGTTAGTAGGATCAAAGGTC +
Preference number: 2 (lower is better)
Translates to: LPLLHHPQLALQGLRRCHTQDSH*LVGSKV
Trigger: GACCTTTGATCCTACTAATCAGTGGCTGTCTTGTGT...ATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR TCA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGGGCAATGTAGATCCCTaGGGGGTCTGTCTGCACCTT +
Preference number: 2 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWGNVDP*GVCLHL
Trigger: AAGGTGCAGACAGACCCCTCAGGGATCTACATTGCC...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGTTCACTTAGTGTACTaGACCCCTTTTCTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLVHLVY*TPFLLP
Trigger: AGGGAGCAGAAAAGGGGTGCAGTACACTAAGTGAAC...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGAGAATCTCAGAGTCATaGGCCTCCACCTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: SVLATGIVKRYSETLTSLRISES*ASTFSI
Trigger: GATGCTGAAGGTGGAGGCCCATGACTCTGAGATTCT...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR TCA 90 bp CTTGCCCACTTTCTTGGGGTCCCTCACATCCCAAACATAAATGCTATGATCGTTCACAGGCCACATCAGTaGATAGGTTGTTCCGTAGCT +
Preference number: 2 (lower is better)
Translates to: LAHFLGVPHIPNINAMIVHRPHQ*IGCSVA
Trigger: AGCTACGGAACAACCTATTCACTGATGTGGCCTGTG...AACGATCATAGCATTTATGTTTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR GCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTCAGGGAGCTAATCCCTaGAGTAATTTCAAATGGCTT +
Preference number: 2 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPQGANP*SNFKWL
Trigger: AAGCCATTTGAAATTACTGCAGGGATTAGCTCCCTG...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCAATGGGAGTGGAATGTaGGGGCTCAGGTCCAAATAC +
Preference number: 2 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFNGSGM*GLRSKY
Trigger: GTATTTGGACCTGAGCCCGCACATTCCACTCCCATT...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTAGAGGGGCTGCAGTTTaGAATCGCTGGAGCATTCAT +
Preference number: 2 (lower is better)
Translates to: YILTYPLTSATYLSHLPLRGAAV*NRWSIH
Trigger: ATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCT...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGAGGAGAAGTCAAAAATaGAGAGATTCTTGTCAGAAC +
Preference number: 2 (lower is better)
Translates to: RNREEILRDSDLSGTCTGRRSQK*RDSCQN
Trigger: GTTCTGACAAGAATCTCTCCATTTTTGACTTCTCCT...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR GCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGCAGGGAGCTAATCCCTaGAGTAATTTCAAATGGCTT +
Preference number: 2 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLQGANP*SNFKWL
Trigger: AAGCCATTTGAAATTACTGCAGGGATTAGCTCCCTG...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR GCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGTTGCCCATCACTGGCTaGAAACTTAACAGCAGTGAT +
Preference number: 2 (lower is better)
Translates to: SVLATGIVKRYSETLTSLLPITG*KLNSSD
Trigger: ATCACTGCTGTTAAGTTTGCAGCCAGTGATGGGCAA...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGCAGTTTGGAATCGCTaGAGCATTCATTCACTTGGG +
Preference number: 2 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFAVWNR*SIHSLG
Trigger: CCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATATTTCAGACCTGTGTCTaGCTTAGAATACTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRIFQTCV*LRILQA
Trigger: TGCCTGGAGTATTCTAAGCCAGACACAGGTCTGAAA...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTGTATCAGCTAGGCTGTaGACACCAAGAATCCAGAAT +
Preference number: 2 (lower is better)
Translates to: YILTYPLTSATYLSHLPLVSARL*TPRIQN
Trigger: ATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATAC...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CCA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGTTTCAGACCTGTGTCTaGCTTAGAATACTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWFQTCV*LRILQA
Trigger: TGCCTGGAGTATTCTAAGCCAGACACAGGTCTGAAA...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp GAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTaGGAAGTCGGGGCACAGCAGGCACGGGCCCGCCCC +
Preference number: 3 (lower is better)
Translates to: EPESHLRWARLV*EVGAQQARARP
Trigger: GGGGCGGGCCCGTGCCTGCTGTGCCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CCA 72 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTaGTGTGGGAAGTCGGGGCACAGCAGGCACGGGCCC +
Preference number: 3 (lower is better)
Translates to: RANLSPTCGGRG*CGKSGHSRHGP
Trigger: GGGCCCGTGCCTGCTGTGCCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CCA 72 bp CCTGGCCCAGAGGGCGAACCTGAGTCCCACCTGCGGTaGGCGCGGCTGGTGTGGGAAGTCGGGGCACAGCAG +
Preference number: 3 (lower is better)
Translates to: PGPEGEPESHLR*ARLVWEVGAQQ
Trigger: CTGCTGTGCCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCTCTGGGCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR GCA 72 bp AAGGACCTGGCCCAGAGGGCGAACCTGAGTCCCACCTaGGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGCAC +
Preference number: 3 (lower is better)
Translates to: KDLAQRANLSPT*GGRGWCGKSGH
Trigger: GTGCCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCTCTGGGCCAGGTCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR GCA 72 bp CATCTTGCAGCCAGCCACCGAGTGGTAGAGCCGCACTaGCTGGCGCACGCTGCCGCGGAGCTCTGCCACCAG +
Preference number: 3 (lower is better)
Translates to: HLAASHRVVEPH*LAHAAAELCHQ
Trigger: CTGGTGGCAGAGCTCCGCGGCAGCGTGCGCCAGGCAGTGCGGCTCTACCACTCGGTGGCTGGCTGCAAGATG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp GTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATaGTCCTTGCTGCTTGCCGCCCCGCTGACGCTGGCG +
Preference number: 3 (lower is better)
Translates to: VPVGSRSPLGRG*SLLLAAPLTLA
Trigger: CGCCAGCGTCAGCGGGGCGGCAAGCAGCAAGGACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCGGGGCCTGGTGCCGGTaGGGTCCAGAAGCCCTTTGG +
Preference number: 3 (lower is better)
Translates to: APGGLAPLPLGCSPDACGGAWCR*GPEALW
Trigger: CCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCC...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 72 bp CCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATTaGCTCTCGGCTGCTCACCAGATGCCTGTGGCACCT +
Preference number: 3 (lower is better)
Translates to: PPPGVLQGDWHH*LSAAHQMPVAP
Trigger: AGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGGGGCCTGGTGCCGGTaGGGTCCAGAAGCCCTTTGG +
Preference number: 3 (lower is better)
Translates to: DHPELRSPETAVRLVKGPGAWCR*GPEALW
Trigger: CCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCC...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 72 bp GGTGCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTaGTCACCAGATGCCTGTGGCACCTGGGCTGGTCTC +
Preference number: 3 (lower is better)
Translates to: GAPGGLAPLPLG*SPDACGTWAGL
Trigger: GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp GGTGGCGATGCTAGAGGAGTGGGGAAGGGCCAGGTTTaGAGCAGCTCAAGCGCACTCAGGCTGATGCCCCGG +
Preference number: 3 (lower is better)
Translates to: GGDARGVGKGQV*SSSSALRLMPR
Trigger: CCGGGGCATCAGCCTGAGTGCGCTTGAGCTGCTCCAAACCTGGCCCTTCCCCACTCCTCTAGCATCGCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CCA 72 bp AGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTaGCACCATTGCCTCTCGGCTGCTCACCAGATGCCT +
Preference number: 3 (lower is better)
Translates to: RTVPPPGVLQGD*HHCLSAAHQMP
Trigger: AGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp AGTTCCAGGGCCATGCGGGTGGCGATGCTAGAGGAGTaGGGAAGGGCCAGGTTTGGAGCAGCTCAAGCGCAC +
Preference number: 3 (lower is better)
Translates to: SSRAMRVAMLEE*GRARFGAAQAH
Trigger: GTGCGCTTGAGCTGCTCCAAACCTGGCCCTTCCCCACTCCTCTAGCATCGCCACCCGCATGGCCCTGGAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CCA 72 bp TCTCCCAGTGGGACAGGCTTCGGGGCAAAGCTGGGCTaGGGACCGAGGCCAGTGCCTTCTTGGTACTCTTGG +
Preference number: 3 (lower is better)
Translates to: SPSGTGFGAKLG*GPRPVPSWYSW
Trigger: CCAAGAGTACCAAGAAGGCACTGGCCTCGGTCCCCAGCCCAGCTTTGCCCCGAAGCCTGTCCCACTGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp GATGGCCAGCGAGTCCTGGCTAGGGTCCTGCAGGCTTaGGGCCAGTGTTTCCAGCTGCCGCAGATCCAGCAT +
Preference number: 3 (lower is better)
Translates to: DGQRVLARVLQA*GQCFQLPQIQH
Trigger: ATGCTGGATCTGCGGCAGCTGGAAACACTGGCCCCAAGCCTGCAGGACCCTAGCCAGGACTCGCTGGCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp CTCAAGGGCCTCCTGCCCATGCTTCCTGGGACCAGATaGGATGATGGCCAGCGAGTCCTGGCTAGGGTCCTG +
Preference number: 3 (lower is better)
Translates to: LKGLLPMLPGTR*DDGQRVLARVL
Trigger: CAGGACCCTAGCCAGGACTCGCTGGCCATCATCCCATCTGGTCCCAGGAAGCATGGGCAGGAGGCCCTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGTCCAGGAGACAGCATaGATGGGGCCTGGTGCCGGT +
Preference number: 3 (lower is better)
Translates to: DHPELRSPETAVRLVKGPVQETA*MGPGAG
Trigger: ACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGAC...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCGCTAGATGCTGTCCATaGGGGCTGACACACACCGAG +
Preference number: 3 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVARCCP*GLTHTE
Trigger: CTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGC...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCGCTAGATGCTGTCCATaGGGGCTGACACACACCGAG +
Preference number: 3 (lower is better)
Translates to: APLPLGCSPDACGTWAGLARCCP*GLTHTE
Trigger: CTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGC...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCGAGGCCAGTGCCTTCTaGGTACTCTTGGCAAGGACG +
Preference number: 3 (lower is better)
Translates to: APLPLGCSPDACGTWAGLEASAF*VLLART
Trigger: CGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCTC...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 72 bp CACCGAGCGGATGCCCACGCGGGGATCCAACAGGGATaGATCAGCTTTGTCTCCTCCAGGCAGCTCTGTGTC +
Preference number: 3 (lower is better)
Translates to: HRADAHAGIQQG*ISFVSSRQLCV
Trigger: GACACAGAGCTGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCCGCTCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp ACTCATCTCCCAGTGGGACAGGCTTCGGGGCAAAGCTaGGCTGGGGACCGAGGCCAGTGCCTTCTTGGTACT +
Preference number: 3 (lower is better)
Translates to: THLPVGQASGQS*AGDRGQCLLGT
Trigger: AGTACCAAGAAGGCACTGGCCTCGGTCCCCAGCCCAGCTTTGCCCCGAAGCCTGTCCCACTGGGAGATGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp TTCCTGGGACCAGATGGGATGATGGCCAGCGAGTCCTaGCTAGGGTCCTGCAGGCTTGGGGCCAGTGTTTCC +
Preference number: 3 (lower is better)
Translates to: FLGPDGMMASES*LGSCRLGASVS
Trigger: GGAAACACTGGCCCCAAGCCTGCAGGACCCTAGCCAGGACTCGCTGGCCATCATCCCATCTGGTCCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp AGGAGAGAATGCAGCCAGGGTAGGACGGTCAGGCAGTaGTTTGGGGATGTCCAGGACCAGGTGAGCCCGGCT +
Preference number: 3 (lower is better)
Translates to: RRECSQGRTVRQ*FGDVQDQVSPA
Trigger: AGCCGGGCTCACCTGGTCCTGGACATCCCCAAACCACTGCCTGACCGTCCTACCCTGGCTGCATTCTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTGCTGGGAAGGCTGCTTaGCCTCTGAACACTGCTCCC +
Preference number: 3 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGAGKAA*PLNTAP
Trigger: GGGAGCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGC...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTAATGCTGGGCCCCTCTaGGAGGGAGAATGGGAGTGG +
Preference number: 3 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPNAGPL*EGEWEW
Trigger: CCACTCCCATTCTCCCTCCAAGAGGGGCCCAGCATT...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CAA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCTTCCAGGCCCACACGTaGACGATCATGTCATGCTGG +
Preference number: 3 (lower is better)
Translates to: SPETAVRLVKGPADWPHVFQAHT*TIMSCW
Trigger: CCAGCATGACATGATCGTCAACGTGTGGGCCTGGAA...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CAA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTTGCAGGTTCCAGATCTaGGGCAAAGACCCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: LGPALGPLEQLHWPESQSCRFQI*GKDPFL
Trigger: GAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGCA...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 72 bp CTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTaGAGGGGCCTGCAGACTGGCCTCATGTCTTTCCTG +
Preference number: 3 (lower is better)
Translates to: LSFDLPRQQCAW*RGLQTGLMSFL
Trigger: CAGGAAAGACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATaGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCC +
Preference number: 3 (lower is better)
Translates to: WPRTHFFISLCL*RSRAGEGALVA
Trigger: GGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CCA 72 bp GAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTaGCCTCATGTCTTTCCTGTGGCACCAGACTGTGCA +
Preference number: 3 (lower is better)
Translates to: ETAVRLVKGPAD*PHVFPVAPDCA
Trigger: TGCACAGTCTGGTGCCACAGGAAAGACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGGCTGGGAAGGCTGCTTaGCCTCTGAACACTGCTCCC +
Preference number: 3 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLAGKAA*PLNTAP
Trigger: GGGAGCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGC...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CAA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCCGACTGGACACCTTGTaGGAGGCCACCACAATGTTT +
Preference number: 3 (lower is better)
Translates to: APLPLGCSPDACGTWAGLRLDTL*EATTMF
Trigger: AAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTCG...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CAA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTTGCAGGTTAGAGGGGTaGAAAAGGCGCACGGTGCCA +
Preference number: 3 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGCRLEG*KRRTVP
Trigger: TGGCACCGTGCGCCTTTTCAACCCCTCTAACCTGCA...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CAA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGGGGGGATTGGCACCATaGCCTCTCGGCTGCTCACCA +
Preference number: 3 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQGGLAP*PLGCSP
Trigger: TGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCC...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 72 bp AGAGGGTCGTCTTCCGCACCACGTGGTGTGTCCGTGTaGACTGCACTCCATCTCCAGACTTCTGCGCAGTGC +
Preference number: 3 (lower is better)
Translates to: RGSSSAPRGVSV*TALHLQTSAQC
Trigger: GCACTGCGCAGAAGTCTGGAGATGGAGTGCAGTTCACACGGACACACCACGTGGTGCGGAAGACGACCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 72 bp GACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTaGTGGTCATCTCAGAGCTCAGGCGCCACACAAATA +
Preference number: 3 (lower is better)
Translates to: DAGATRPDAASC*WSSQSSGATQI
Trigger: TATTTGTGTGGCGCCTGAGCTCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 72 bp GTCTCTGAGGAGCTGGGCAATCCGACTTTGCTCTGCTaGGGGCATCTTGCAGCCAGCCACCGAGTGGTAGAG +
Preference number: 3 (lower is better)
Translates to: VSEELGNPTLLC*GHLAASHRVVE
Trigger: CTCTACCACTCGGTGGCTGGCTGCAAGATGCCCTCAGCAGAGCAAAGTCGGATTGCCCAGCTCCTCAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 72 bp GCTGGGAAGGCTGCTTTGCCTCTGAACACTGCTCCCTaGTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTG +
Preference number: 3 (lower is better)
Translates to: AGKAALPLNTAP*FPLQAAPQVLV
Trigger: CACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
3UTR GCA 72 bp GGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTaGCCTCCTACCTCTCACAGCACCAAGATGACAAAG +
Preference number: 3 (lower is better)
Translates to: GPALPRFLDGAG*PPTSHSTKMTK
Trigger: CTTTGTCATCTTGGTGCTGTGAGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR GCA 72 bp GCCTTTCTGAGCTCCAGGTATTGGGGAAAACCACCCTaGTCTGGCAGCCACGGGAGTGCAGCTGGTGTGAGA +
Preference number: 3 (lower is better)
Translates to: AFLSSRYWGKPP*SGSHGSAAGVR
Trigger: TCTCACACCAGCTGCACTCCCGTGGCTGCCAGAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAGAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR GCA 72 bp CACACCTGGCCCAGAACCCATTTCTTTATAAGCCTCTaGCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTC +
Preference number: 3 (lower is better)
Translates to: HTWPRTHFFISL*LWRSRAGEGAL
Trigger: GAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCAGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR GCA 72 bp GTCGTCTTCCGCACCACGTGGTGTGTCCGTGTGAACTaGACTCCATCTCCAGACTTCTGCGCAGTGCGGAAG +
Preference number: 3 (lower is better)
Translates to: VVFRTTWCVRVN*TPSPDFCAVRK
Trigger: CTTCCGCACTGCGCAGAAGTCTGGAGATGGAGTGCAGTTCACACGGACACACCACGTGGTGCGGAAGACGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 72 bp TGGCTAGTGAGTGAAGTCTCAAGGGCCTCCTGCCCATaGTTCCTGGGACCAGATGGGATGATGGCCAGCGAG +
Preference number: 3 (lower is better)
Translates to: WLVSEVSRASCP*FLGPDGMMASE
Trigger: CTCGCTGGCCATCATCCCATCTGGTCCCAGGAAGCATGGGCAGGAGGCCCTTGAGACTTCACTCACTAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 72 bp GAGAAGGTGTCTCTGAGGAGCTGGGCAATCCGACTTTaGTCTGCTGAGGGCATCTTGCAGCCAGCCACCGAG +
Preference number: 3 (lower is better)
Translates to: EKVSLRSWAIRL*SAEGILQPATE
Trigger: CTCGGTGGCTGGCTGCAAGATGCCCTCAGCAGAGCAAAGTCGGATTGCCCAGCTCCTCAGAGACACCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp GCCTCGGTGACGCTAGCAATGTCTGTCCCCAGAGCATaGGGTCGGGGCAAGGTGCTAAGGAAGTGCAGGTTA +
Preference number: 3 (lower is better)
Translates to: ASVTLAMSVPRA*GRGKVLRKCRL
Trigger: TAACCTGCACTTCCTTAGCACCTTGCCCCGACCCCATGCTCTGGGGACAGACATTGCTAGCGTCACCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR CCA 72 bp GCTGCCTGGGTACACTCTTCCCAGAGTTCCCCGGGCTaGAGCCTGCACTTGGAACTCACTGGTATCCATGGT +
Preference number: 3 (lower is better)
Translates to: AAWVHSSQSSPG*SLHLELTGIHG
Trigger: ACCATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTGGGAAGAGTGTACCCAGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCGCTGGGAAGGCTGCTTaGCCTCTGAACACTGCTCCC +
Preference number: 3 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPAGKAA*PLNTAP
Trigger: GGGAGCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGC...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp TCCCAGAGTTCCCCGGGCTGGAGCCTGCACTTGGAACTCACTGGTATCCATGGTACCCGACTGGACACCTaGTTGGAGGCCACCACAATG +
Preference number: 3 (lower is better)
Translates to: SQSSPGWSLHLELTGIHGTRLDT*LEATTM
Trigger: CATTGTGGTGGCCTCCAACAAGGTGTCCAGTCGGGT...ACCATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CAA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCCCAGGGGCCCGGCCTTaGGTGACAGGAGAGAATGCA +
Preference number: 3 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSPGARP*VTGENA
Trigger: TGCATTCTCTCCTGTCACCAAAGGCCGGGCCCCTGG...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCACAGAAGATGTAGTCTaGGCTCACAGAGATGCAGTG +
Preference number: 3 (lower is better)
Translates to: APLPLGCSPDACGTWAGLTEDVV*AHRDAV
Trigger: CACTGCATCTCTGTGAGCCAAGACTACATCTTCTGT...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CAA 90 bp TCCCAGAGTTCCCCGGGCTGGAGCCTGCACTTGGAACTCACTGGTATCCATGGTACCTTGCCCACTTTCTaGGGGTCCCTCACATCCCAA +
Preference number: 3 (lower is better)
Translates to: SQSSPGWSLHLELTGIHGTLPTF*GSLTSQ
Trigger: TTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAGGT...ACCATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR TCA 72 bp CTGGCTCTTCAAGGTCTGAGGAGATGCCATCCACACTaGGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGT +
Preference number: 3 (lower is better)
Translates to: LALQGLRRCHPH*GAPCSQSLQWG
Trigger: ACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTCCTCAGACCTTGAAGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 72 bp CCCTCCCCCAAACAGGCCCATCTCTCAGTTGTACTGTaGGCTTTTCCTAGGCCCACCGGGAAGCCAGGCTTT +
Preference number: 3 (lower is better)
Translates to: PSPKQAHLSVVL*AFPRPTGKPGF
Trigger: AAAGCCTGGCTTCCCGGTGGGCCTAGGAAAAGCTCACAGTACAACTGAGAGATGGGCCTGTTTGGGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 72 bp ACCCTAAGTGTGCCCATACGGTCCCCTGATGCTAGATaGTGTCCATTGGGGCTGACACACACCGAGCGGATG +
Preference number: 3 (lower is better)
Translates to: TLSVPIRSPDAR*CPLGLTHTERM
Trigger: CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTATGGGCACACTTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp CAGATCCAGCATGGATCTAACGCTCAGTTCCACACCTaGCTGAACCCAGCGCCCTCTTCTTCTGGGTCCTGG +
Preference number: 3 (lower is better)
Translates to: QIQHGSNAQFHT*LNPAPSSSGSW
Trigger: CCAGGACCCAGAAGAAGAGGGCGCTGGGTTCAGCCAGGTGTGGAACTGAGCGTTAGATCCATGCTGGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGACATCAGTGAATAGGTaGTTCCGTAGCTCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVTSVNR*FRSSPS
Trigger: GCTGGGAGAGCTACGGAACAACCTATTCACTGATGT...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CAA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGGAGAGGATGGTCCTaGCTGCTTGCCGCCCCGCTG +
Preference number: 3 (lower is better)
Translates to: SVLATGIVKRYSETLTSLGRGWS*LLAAPL
Trigger: CAGCGGGGCGGCAAGCAGCAAGGACCATCCTCTCCC...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCCTTCTTGGTACTCTaGGCAAGGACGGGCAGTGCT +
Preference number: 3 (lower is better)
Translates to: RNREEILRDSDLSGTCTGAFLVL*ARTGSA
Trigger: AGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGC...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCGTGCATTCCATGGGGTaGGGAGTCTTCTCAGGGGGT +
Preference number: 3 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSVHSMG*GVFSGG
Trigger: ACCCCCTGAGAAGACTCCCAACCCCATGGAATGCAC...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 72 bp GTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTTTaGGGAGGCTCCTTCTACCTAAACCAGGTGTCCTAT +
Preference number: 3 (lower is better)
Translates to: VSSTPVGAQHCL*GGSFYLNQVSY
Trigger: ATAGGACACCTGGTTTAGGTAGAAGGAGCCTCCTCAAAGGCAGTGCTGGGCACCCACGGGTGTGCTGGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR TCA 72 bp TCATGGGCCTCCACCTTCAGCATCTCACTCAGGGACTaGAGTTCGTGCACCCTAAGTGTGCCCATACGGTCC +
Preference number: 3 (lower is better)
Translates to: SWASTFSISLRD*SSCTLSVPIRS
Trigger: GGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATGCTGAAGGTGGAGGCCCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 72 bp CTTCCAGCTCCTGTCGCACTGAAGAGAAGGTGTCTCTaGGGAGCTGGGCAATCCGACTTTGCTCTGCTGAGG +
Preference number: 3 (lower is better)
Translates to: LPAPVALKRRCL*GAGQSDFALLR
Trigger: CCTCAGCAGAGCAAAGTCGGATTGCCCAGCTCCTCAGAGACACCTTCTCTTCAGTGCGACAGGAGCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 72 bp AGACTGGCCTCATGTCTTTCCTGTGGCACCAGACTGTaGACAGACTGGGCCTTCTGGAGTCCAGAAAAGGGG +
Preference number: 3 (lower is better)
Translates to: RLASCLSCGTRL*TDWAFWSPEKG
Trigger: CCCCTTTTCTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATGAGGCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp CTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTaGGGACACCCTGGAGGGCCAGATGGCTCTGCCTTT +
Preference number: 3 (lower is better)
Translates to: LRSKYQLKSPDG*GHPGGPDGSAF
Trigger: AAAGGCAGAGCCATCTGGCCCTCCAGGGTGTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR CCA 72 bp TCATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTaGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: SCLSCGTRLCTD*AFWSPEKGLAV
Trigger: CACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp CAGAGATACTGCGGGATATCTTGGCCATGGAACTGGTaGTGGGGTTCTGATAGGAGTGAGGCCGAGACGGAC +
Preference number: 3 (lower is better)
Translates to: QRYCGISWPWNW*WGSDRSEAETD
Trigger: GTCCGTCTCGGCCTCACTCCTATCAGAACCCCACCACCAGTTCCATGGCCAAGATATCCCGCAGTATCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGCTGGGAAGGCTGCTTaGCCTCTGAACACTGCTCCC +
Preference number: 3 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFAGKAA*PLNTAP
Trigger: GGGAGCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CAA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACTCTGAGCTCCAGGTATaGGGGAAAACCACCCTGCTC +
Preference number: 3 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHSELQV*GKTTLL
Trigger: GAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAGA...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CAA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGAATGCTGGGCCCCTCTaGGAGGGAGAATGGGAGTGG +
Preference number: 3 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWNAGPL*EGEWEW
Trigger: CCACTCCCATTCTCCCTCCAAGAGGGGCCCAGCATT...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CAA 90 bp CTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATCAAGCCACACCATACTaGTGCTCCTGCAGCTCGGCC +
Preference number: 3 (lower is better)
Translates to: LPLLHHPQLALQGLRRCHQATPY*CSCSSA
Trigger: GGCCGAGCTGCAGGAGCACAAGTATGGTGTGGCTTG...ATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CAA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGACTCAGCTCCACCCACTaGTCCAAAAGCCTTCGATCA +
Preference number: 3 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGLSSTH*SKSLRS
Trigger: TGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAG...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR CCA 72 bp TTGGTGAGGGGCAGAGGGGCTGCAGTTTGGAATCGCTaGAGCATTCATTCACTTGGGACAGGCTTCCAGAAC +
Preference number: 3 (lower is better)
Translates to: LVRGRGAAVWNR*SIHSLGTGFQN
Trigger: GTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCTGCCCCTCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
3UTR CCA 72 bp GCCAGGAGAGTAAGGGGTCACAGGGAAATACAATGCTaGGCCCCTCTTGGAGGGAGAATGGGAGTGGAATGT +
Preference number: 3 (lower is better)
Translates to: ARRVRGHREIQC*APLGGRMGVEC
Trigger: ACATTCCACTCCCATTCTCCCTCCAAGAGGGGCCCAGCATTGTATTTCCCTGTGACCCCTTACTCTCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR CCA 72 bp CAACAGAGATACTGCGGGATATCTTGGCCATGGAACTaGTGGTGGGGTTCTGATAGGAGTGAGGCCGAGACG +
Preference number: 3 (lower is better)
Translates to: QQRYCGISWPWN*WWGSDRSEAET
Trigger: CGTCTCGGCCTCACTCCTATCAGAACCCCACCACCAGTTCCATGGCCAAGATATCCCGCAGTATCTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp TCTCCCCAACAGAGATACTGCGGGATATCTTGGCCATaGAACTGGTGGTGGGGTTCTGATAGGAGTGAGGCC +
Preference number: 3 (lower is better)
Translates to: SPQQRYCGISWP*NWWWGSDRSEA
Trigger: GGCCTCACTCCTATCAGAACCCCACCACCAGTTCCATGGCCAAGATATCCCGCAGTATCTCTGTTGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAAATGCTGGGCCCCTCTaGGAGGGAGAATGGGAGTGG +
Preference number: 3 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSNAGPL*EGEWEW
Trigger: CCACTCCCATTCTCCCTCCAAGAGGGGCCCAGCATT...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CAA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGCAGTGGCATTCACCTTaGAGGTCTTGCTGTCATCGA +
Preference number: 3 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQQWHSP*RSCCHR
Trigger: TCGATGACAGCAAGACCTCAAAGGTGAATGCCACTG...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CAA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACAGGGATGCATCAGCTTaGTCTCCTCCAGGCAGCTCT +
Preference number: 3 (lower is better)
Translates to: GRVCTCNRNREEILRDSDRDASA*SPPGSS
Trigger: AGAGCTGCCTGGAGGAGACAAAGCTGATGCATCCCT...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGTCCAGGAGACAGCATaGATGGGGCCTGGTGCCGGT +
Preference number: 3 (lower is better)
Translates to: SVLATGIVKRYSETLTSLVQETA*MGPGAG
Trigger: ACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGAC...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR TCA 72 bp CGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTaGCTAAGCATCATTCAGGATGCAGGGAGAAGGTGG +
Preference number: 3 (lower is better)
Translates to: RPVNEGCSNTGF*LSIIQDAGRRW
Trigger: CCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR GCA 72 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTaGTGGAAGTTCTTCTTCAGTCCCCTCATCTTCTCC +
Preference number: 3 (lower is better)
Translates to: QCLLGTLGKDGQ*WKFFFSPLIFS
Trigger: GGAGAAGATGAGGGGACTGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 72 bp GATGGGGATGGTTCCCTGAGTGGGCGGGTCTGTACTTaGAACAGGAATCGTGAAGAGATACTCCGAGACTCT +
Preference number: 3 (lower is better)
Translates to: DGDGSLSGRVCT*NRNREEILRDS
Trigger: AGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCCACTCAGGGAACCATCCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp TACAATGCTGGGCCCCTCTTGGAGGGAGAATGGGAGTaGAATGTGCGGGCTCAGGTCCAAATACCAACTCAA +
Preference number: 3 (lower is better)
Translates to: YNAGPLLEGEWE*NVRAQVQIPTQ
Trigger: TTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCACTCCCATTCTCCCTCCAAGAGGGGCCCAGCATTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR CCA 72 bp AGAAGGACACTGCTGTCACCCGACTGGACACCTTGTTaGAGGCCACCACAATGTTTTTCTTCCAGGCCCACA +
Preference number: 3 (lower is better)
Translates to: RRTLLSPDWTPC*RPPQCFSSRPT
Trigger: TGTGGGCCTGGAAGAAAAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTCGGGTGACAGCAGTGTCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR CCA 72 bp TGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTaGAAGTTCTTCTTCAGTCCCCTCATCTTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: CLLGTLGKDGQC*KFFFSPLIFSL
Trigger: GAGGGAGAAGATGAGGGGACTGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp ATGATTTTAATGAGGTCACTGCTGAGGATGTTTCGGTaGAGGGTGGAGCCATGCACCCCGGAGCTCTCTGTG +
Preference number: 3 (lower is better)
Translates to: MILMRSLLRMFR*RVEPCTPELSV
Trigger: CACAGAGAGCTCCGGGGTGCATGGCTCCACCCTCCACCGAAACATCCTCAGCAGTGACCTCATTAAAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512970.5
3UTR-3UTR CAA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCTCGAGATACCAGAATTaGATGTGTCGGTTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPSRYQN*MCRLPA
Trigger: TGCAGGCAACCGACACATCAAATTCTGGTATCTCGA...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR TCA 72 bp CAAAAGCCTTCGATCACTGAACTCGCACAGCAGCCCTaGGGACGTGATGCAGAAGGTACTGTCCGCCTTTTT +
Preference number: 3 (lower is better)
Translates to: QKPSITELAQQP*GRDAEGTVRLF
Trigger: AAAAAGGCGGACAGTACCTTCTGCATCACGTCCTCAGGGCTGCTGTGCGAGTTCAGTGATCGAAGGCTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR CCA 72 bp CCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATaGCTTCTAAGAGAGGGCCAGCCCTTCCCAGATTCC +
Preference number: 3 (lower is better)
Translates to: PPQGANPCSNFK*LLREGQPFPDS
Trigger: GGAATCTGGGAAGGGCTGGCCCTCTCTTAGAAGCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR CCA 72 bp CCACTGCTGATGTTAAATATCCGAATATTTCGGTCCTaGCAGCCGATAGCCGTGTACTTCCAGCTGGGCTCC +
Preference number: 3 (lower is better)
Translates to: PLLMLNIRIFRS*QPIAVYFQLGS
Trigger: GGAGCCCAGCTGGAAGTACACGGCTATCGGCTGCCAGGACCGAAATATTCGGATATTTAACATCAGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATaGGTGCAGGTTCCAGATCTTGGGCAAAGACCCCTT +
Preference number: 3 (lower is better)
Translates to: CHSAPGRQYHLQ*VQVPDLGQRPL
Trigger: AAGGGGTCTTTGCCCAAGATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR-3UTR CAA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTGCTGGGAAGGCTGCTTaGCCTCTGAACACTGCTCCC +
Preference number: 3 (lower is better)
Translates to: YILTYPLTSATYLSHLPLAGKAA*PLNTAP
Trigger: GGGAGCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGC...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CAA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAAGAGCCGAGTACACCTaGCCCACTTTCTTGGGGTCC +
Preference number: 3 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRIRAEYT*PTFLGS
Trigger: GGACCCCAAGAAAGTGGGCAAGGTGTACTCGGCTCT...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR-3UTR CAA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATCACAGGCGGATGGTGTaGTCTGAGGAGCAGGTAATA +
Preference number: 3 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDHRRMV*SEEQVI
Trigger: TATTACCTGCTCCTCAGACAACACCATCCGCCTGTG...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512970.5
3UTR-3UTR CAA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCTCTGAGCTCCAGGTATaGGGGAAAACCACCCTGCTC +
Preference number: 3 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLSELQV*GKTTLL
Trigger: GAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAGA...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR TCA 72 bp AGGCCACCACAATGTTTTTCTTCCAGGCCCACACGTTaGCGATCATGTCATGCTGGTAGCCCACAGAGACAA +
Preference number: 3 (lower is better)
Translates to: RPPQCFSSRPTR*RSCHAGSPQRQ
Trigger: TTGTCTCTGTGGGCTACCAGCATGACATGATCGTCAACGTGTGGGCCTGGAAGAAAAACATTGTGGTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR GCA 72 bp AGACGCAGGAAGAATGATACAGAGCCGAGTACACCTTaGCCACTTTCTTGGGGTCCCTCACATCCCAAACAT +
Preference number: 3 (lower is better)
Translates to: RRRKNDTEPSTP*PLSWGPSHPKH
Trigger: ATGTTTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAGGTGTACTCGGCTCTGTATCATTCTTCCTGCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR CCA 72 bp TTGAGGAGGCTCCTTCTACCTAAACCAGGTGTCCTATaGGCTATCTCGTATCAGCTAGGCTGTGGACACCAA +
Preference number: 3 (lower is better)
Translates to: LRRLLLPKPGVL*AISYQLGCGHQ
Trigger: TTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAGCCTCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CAA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAATTCACCTTTGAGGTCTaGCTGTCATCGAGATACCAG +
Preference number: 3 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEFTFEV*LSSRYQ
Trigger: CTGGTATCTCGATGACAGCAAGACCTCAAAGGTGAA...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR TCA 72 bp TTAATGAGGTCCTCCACACTCCAGACGCAGGAAGAATaGTACAGAGCCGAGTACACCTTGCCCACTTTCTTG +
Preference number: 3 (lower is better)
Translates to: LMRSSTLQTQEE*YRAEYTLPTFL
Trigger: CAAGAAAGTGGGCAAGGTGTACTCGGCTCTGTATCATTCTTCCTGCGTCTGGAGTGTGGAGGACCTCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
3UTR TCA 72 bp TGTCTGCACCTTAATGAGTGTGCCGTCCTCACCCTGTaGCCCTTTAAACAGCTTCTTCTGCTTTCCACTGCT +
Preference number: 3 (lower is better)
Translates to: CLHLNECAVLTL*PFKQLLLLSTA
Trigger: AGCAGTGGAAAGCAGAAGAAGCTGTTTAAAGGGTCACAGGGTGAGGACGGCACACTCATTAAGGTGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 72 bp TACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTaGAGTAATTTCAAATGGCTTCTAAGAGAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: YPVYAPPQGANP*SNFKWLLREGQ
Trigger: CTGGCCCTCTCTTAGAAGCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR-3UTR CAA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGGCTGATCATGCGGACTaGCCCATCACTGGCTGCAAA +
Preference number: 3 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWADHAD*PITGCK
Trigger: TTTGCAGCCAGTGATGGGCAAGTCCGCATGATCAGC...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CCA 72 bp TATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTaGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTC +
Preference number: 3 (lower is better)
Translates to: YQLGCGHQESRI*VHLVYCTPFLL
Trigger: GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR CCA 72 bp AGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTaGACACCAAGAATCCAGAATCTGGGTTCACTTAGT +
Preference number: 3 (lower is better)
Translates to: RCPMGYLVSARL*TPRIQNLGSLS
Trigger: ACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGGACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
3UTR CCA 72 bp ACAATACCATCTTCAATGGGTGCAGGTTCCAGATCTTaGGCAAAGACCCCTTCCTCTTGTGACAATAATCGG +
Preference number: 3 (lower is better)
Translates to: TIPSSMGAGSRS*AKTPSSCDNNR
Trigger: CCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGCACCCATTGAAGATGGTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR GCA 72 bp CCGTCCTCACCCTGTGACCCTTTAAACAGCTTCTTCTaGTTTCCACTGCTGATGTTAAATATCCGAATATTT +
Preference number: 3 (lower is better)
Translates to: PSSPCDPLNSFF*FPLLMLNIRIF
Trigger: AAATATTCGGATATTTAACATCAGCAGTGGAAAGCAGAAGAAGCTGTTTAAAGGGTCACAGGGTGAGGACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGAATGTCCAGGACCAGGTaGGCCCGGCTGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRMSRTR*ARLGRA
Trigger: GGCCCTGCCCAGCCGGGCTCACCTGGTCCTGGACAT...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGACAGCAGTGCGCCTGGTaGAGGGGCCTGCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRQQCAW*RGLQTG
Trigger: GCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTG...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGAGAGTCCCACCTGCGGTaGGCGCGGCTGGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRESHLR*ARLVWE
Trigger: TTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTC...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGCTTCGGGGCAAAGCTaGGCTGGGGACCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGASGQS*AGDRGQ
Trigger: CTGGCCTCGGTCCCCAGCCCAGCTTTGCCCCGAAGC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGATGGCTGGGGACACCCTaGAGGGCCAGATGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRWLGTP*RARWLC
Trigger: GCAGAGCCATCTGGCCCTCCAGGGTGTCCCCAGCCA...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGGAGAAGGTGGCCTCTaGGCTCCAGCAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGGEGGL*APAAGW
Trigger: CCAGCCGGCTGCTGGAGCCCAGAGGCCACCTTCTCC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGACACCTGGCTGTGCTCTaGCACGTCCCAAACCCGCAC +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRHLAVL*HVPNPH
Trigger: GTGCGGGTTTGGGACGTGGCAGAGCACAGCCAGGTG...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGATGGTCCTTGCTGCTTaGCGCCCCGCTGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGMVLAA*RPADAG
Trigger: GCCAGCGTCAGCGGGGCGGCAAGCAGCAAGGACCAT...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGCTGACTGGCAGTTGCTaGGCACAGGGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGLTGSC*AQGLLG
Trigger: GCCCAGCAGCCCCTGTGCCCAGCAACTGCCAGTCAG...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGCGCACGGCAGGCATGTaGCCACTCTCTCCAGTGACC +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGRTAGM*PLSPVT
Trigger: GGTCACTGGAGAGAGTGGGCACATGCCTGCCGTGCG...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGAGAGTCTTCAGTGGGGTaGTCCGGGCTGGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRESSVG*SGLERQ
Trigger: CTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTC...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGATCTGTCCCCAGAGCATaGGGTCGGGGCAAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRSVPRA*GRGKVL
Trigger: TAGCACCTTGCCCCGACCCCATGCTCTGGGGACAGA...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CAGCTCGGCCACCTGGCTGTGCTCTGCCACGTCCCAAACCCGCACGGCAGGCATGCTTCGGGGCAAAGCTaGGCTGGGGACCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QLGHLAVLCHVPNPHGRHASGQS*AGDRGQ
Trigger: CTGGCCTCGGTCCCCAGCCCAGCTTTGCCCCGAAGC...ATGCCTGCCGTGCGGGTTTGGGACGTGGCAGAGCACAGCCAGGTGGCCGAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR CCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGTGGGGTGCTCCGGGCTaGAAAGGCAGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGWGAPG*KGSCCC
Trigger: ACAGCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCA...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGACTGTGGCCACTCTCTTaGGAGCCCAGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRLWPLS*EPSCCQ
Trigger: CTGACAGCAGCTGGGCTCCCAAGAGAGTGGCCACAG...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGCCCACGAGGAGCGGCTaGGAAGGCTGCTTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGPTRSG*EGCFAS
Trigger: AGAGGCAAAGCAGCCTTCCCAGCCGCTCCTCGTGGG...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGGAGTCCCACCTGCGGTaGGCGCGGCTGGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMESHLR*ARLVWE
Trigger: TTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTC...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGCTCACCGCTGGCTCTaGGTCCTGGCTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVAHRWL*VLAQGC
Trigger: GCAGCCCTGAGCCAGGACTCAGAGCCAGCGGTGAGC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGGGGCTCTCGTGGCCTaGAGCTGTGGTAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGGALVA*SCGKAA
Trigger: AGCAGCTTTACCACAGCTTCAGGCCACGAGAGCCCC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
68% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGCCCATAGGGGCCCATaGCTCCCTCCTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGAHRGP*LPPLLP
Trigger: AGGAAGAAGAGGAGGGAGGCATGGGCCCCTATGGGC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCCTGCCTGGCGCACGCTaGCGCGGAGCTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVLPGAR*RGALPP
Trigger: TGGTGGCAGAGCTCCGCGGCAGCGTGCGCCAGGCAG...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCGTGGTAGAGCCGCACTaGCTGGCGCACGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVVVEPH*LAHAAA
Trigger: CGCGGCAGCGTGCGCCAGGCAGTGCGGCTCTACCAC...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGAGCAGGGCCTGTGTCTaGTCGGCTCCCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMSRACV*SAPTAP
Trigger: TGGGGCTGTGGGAGCCGAGCAGACACAGGCCCTGCT...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGGGGCAAAGCTGGGCTaGGGACCGAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVGAKLG*GPRPVP
Trigger: AGGCACTGGCCTCGGTCCCCAGCCCAGCTTTGCCCC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGACTTCCTGGGACCAGATaGGATGATGGCCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRLPGTR*DDGQRV
Trigger: GACTCGCTGGCCATCATCCCATCTGGTCCCAGGAAG...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGATCCAGGCCCACACGTTaGCGATCATGTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRSRPTR*RSCHAG
Trigger: ACCAGCATGACATGATCGTCAACGTGTGGGCCTGGA...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGGCTGTCCATTGGGGCTaGCACACACCGAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMAVHWG*HTPSGC
Trigger: GCATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGC...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGAGTTCCACACCTGGCTaGACCCAGCGCCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGSSTPG*TQRPLL
Trigger: AAGAAGAGGGCGCTGGGTTCAGCCAGGTGTGGAACT...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGCCCAGCACTGCCTTTaGGGAGGCTCCTTCTACCTA +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGAQHCL*GGSFYL
Trigger: TAGGTAGAAGGAGCCTCCTCAAAGGCAGTGCTGGGC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGAGCCGAGTACACCTTaGCCACTTTCTTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGEPSTP*PLSWGP
Trigger: GGGACCCCAAGAAAGTGGGCAAGGTGTACTCGGCTC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGAGCCAGTGTTTCCAGCTaGCGCAGATCCAGCATGGAT +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRASVSS*RRSSMD
Trigger: ATCCATGCTGGATCTGCGGCAGCTGGAAACACTGGC...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGTTCCACCTCCGGGGGTaGTCCAGGGGGATTGGCACC +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVFHLRG*SRGIGT
Trigger: GGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAA...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGACCAGCTGCTCACACTaGTCCAGGCTCACCGCTGGC +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMTSCSH*SRLTAG
Trigger: GCCAGCGGTGAGCCTGGAGCAGTGTGAGCAGCTGGT...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGCTGCCGCGGAGCTCTaGCACCAGCTGCTCACACTG +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVAAAEL*HQLLTL
Trigger: CAGTGTGAGCAGCTGGTGGCAGAGCTCCGCGGCAGC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGCAGCACACCCGTGGGTaGCCAGCACTGCCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMQHTRG*PALPLR
Trigger: CCTCAAAGGCAGTGCTGGGCACCCACGGGTGTGCTG...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGCCCACTCTCTCCAGTaGCCAAGTACTTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGAHSLQ*PSTCHQ
Trigger: CTGATGGCAAGTACTTGGTCACTGGAGAGAGTGGGC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCAATGTCCAGGACCAGGTaGGCCCGGCTGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQAMSRTR*ARLGRA
Trigger: GGCCCTGCCCAGCCGGGCTCACCTGGTCCTGGACAT...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATGGGCCCGGCCTTTGGTaGCAGGAGAGAATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHGPGLW*QERMQP
Trigger: TGGCTGCATTCTCTCCTGTCACCAAAGGCCGGGCCC...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCTCACCGCTGGCTCTaGGTCCTGGCTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPAHRWL*VLAQGC
Trigger: GCAGCCCTGAGCCAGGACTCAGAGCCAGCGGTGAGC...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGACTCCTAACCTCAGGTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVTPNLR*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACCTGAGGTTAGGAGT...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp CGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCCCCTGTGGTAGAGCCGCACTaGCTGGCGCACGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: REEILRDSDLSGTCTGAPVVEPH*LAHAAA
Trigger: CGCGGCAGCGTGCGCCAGGCAGTGCGGCTCTACCAC...AGGGGCCCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGTGGGGAAAACCACCCTaGTCTGGCAGCCACGGGAGT +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMWGKPP*SGSHGS
Trigger: ACTCCCGTGGCTGCCAGAGCAGGGTGGTTTTCCCCA...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGAGGGCCAGATGGCTCTaGCTTTCTGAGCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGRARWL*LSELQV
Trigger: TACCTGGAGCTCAGAAAGGCAGAGCCATCTGGCCCT...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGACCAGAGCTTCATGTTTaGCCAGGTGAGGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRPELHV*PGEGLL
Trigger: CAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGG...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTGCTGCTGCAGCTCGGCCACCTaGCTGTGCTCTGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: PCSQSLQWGAPGWKGSCCCSSAT*LCSATS
Trigger: GGACGTGGCAGAGCACAGCCAGGTGGCCGAGCTGCA...GCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGATGGTGTCTGGATACCTaGCATTCGCCACTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRWCLDT*HSPLQR
Trigger: TCTCTGGAGTGGCGAATGCCAGGTATCCAGACACCA...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCTTCGGGGCAAAGCTaGGCTGGGGACCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPASGQS*AGDRGQ
Trigger: CTGGCCTCGGTCCCCAGCCCAGCTTTGCCCCGAAGC...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGTTGGCTGCAGGAGCTaGGTCCAGGAACCCCACGGA +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVVGCRS*VQEPHG
Trigger: TCCGTGGGGTTCCTGGACCCAGCTCCTGCAGCCAAC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCACGGACGGCCATCAGCTaGGGGCAGGGAGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQARTAIS*GQGAQT
Trigger: GGTCTGGGCTCCCTGCCCCCAGCTGATGGCCGTCCG...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGAGGGATATCTTGGCCATaGAACTGGTGGTGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRGISWP*NWWWGS
Trigger: AGAACCCCACCACCAGTTCCATGGCCAAGATATCCC...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGATACTGCGGGATATCTTaGCCATGGAACTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRYCGIS*PWNWWW
Trigger: CCACCACCAGTTCCATGGCCAAGATATCCCGCAGTA...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCCTGACTGGCAGTTGCTaGGCACAGGGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVLTGSC*AQGLLG
Trigger: GCCCAGCAGCCCCTGTGCCCAGCAACTGCCAGTCAG...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGAACGCGAACTACCGCCTaGGCCAAGCCGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRTRTTA*AKPRAG
Trigger: CCCAGCCCGCGGCTTGGCCCAGGCGGTAGTTCGCGT...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512970.5
3UTR CAA 72 bp GTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTCCTaGCTGCTTGCCGCCCCGCTGACGCTGGCGCAACTC +
Preference number: 4 (lower is better)
Translates to: VGSRSPLGRGWS*LLAAPLTLAQL
Trigger: GAGTTGCGCCAGCGTCAGCGGGGCGGCAAGCAGCAAGGACCATCCTCTCCCCAAAGGGCTTCTGGACCCAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCTGCTTGCCGCCCCGCTaGCGCTGGCGCAACTCGGCC +
Preference number: 4 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPCLPPR*RWRNSA
Trigger: GGCCGAGTTGCGCCAGCGTCAGCGGGGCGGCAAGCA...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATTCCAGGAGACAGCATTaGTGGGGCCTGGTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHSRRQH*WGLVPV
Trigger: AACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGA...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGAGCTGCTGTCAGGGTTaGGACGGCATCGTGGCAACA +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMSCCQG*DGIVAT
Trigger: TGTTGCCACGATGCCGTCTCAACCCTGACAGCAGCT...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGCAGCAGTGCGCCTGGTaGAGGGGCCTGCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMQQCAW*RGLQTG
Trigger: GCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTG...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGATGTCCAGGACCAGGTaGGCCCGGCTGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLMSRTR*ARLGRA
Trigger: GGCCCTGCCCAGCCGGGCTCACCTGGTCCTGGACAT...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATCTTGGAAGAGGCTGCTaGCTGGCAGTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHLGRGC*LAVAGH
Trigger: GTGCCCAGCAACTGCCAGTCAGCAGCCTCTTCCAAG...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGGCTCACCGCTGGCTCTaGGTCCTGGCTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMAHRWL*VLAQGC
Trigger: GCAGCCCTGAGCCAGGACTCAGAGCCAGCGGTGAGC...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGTTGGCTGACGGGCACTaGATACCACATCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGLADGH*IPHHLS
Trigger: TGAGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAA...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCGGCCACCTGGCTGTaGTCTGCCACGTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVSATWL*SATSQT
Trigger: GGTTTGGGACGTGGCAGAGCACAGCCAGGTGGCCGA...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCCACACACCGAGCGGATaGCCACGCGGGGATCCAACA +
Preference number: 4 (lower is better)
Translates to: APLPLGCSPDACGTWAGLHTPSG*PRGDPT
Trigger: TGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGCAGTGCGGAAGTAGATaGTCTTGTCTGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGQCGSR*SCLLHS
Trigger: GCTGTGGAGCAGACAAGAGCATCTACTTCCGCACTG...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCAGGGCCTCCTGCCCATaGTTCCTGGGACCAGATGGG +
Preference number: 4 (lower is better)
Translates to: SPETAVRLVKGPADWPHVRASCP*FLGPDG
Trigger: CCCATCTGGTCCCAGGAAGCATGGGCAGGAGGCCCT...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGCCCATAGGGGCCCATaGCTCCCTCCTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVAHRGP*LPPLLP
Trigger: AGGAAGAAGAGGAGGGAGGCATGGGCCCCTATGGGC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCCTGGAGTCTGGGGGCTaGCCTCCTGTAGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: APGGLAPLPLGCSPDACGLESGG*PPVAHR
Trigger: CCTATGGGCTACAGGAGGGCAGCCCCCAGACTCCAG...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATCCATTGCCTCTCGGCTaGTCACCAGATGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHPLPLG*SPDACG
Trigger: GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGG...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTTTCCACCTCCGGGGGTaGTCCAGGGGGATTGGCACC +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPFHLRG*SRGIGT
Trigger: GGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAA...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGGAAGCCAGGCTTTTCTaGCTCGCCAGGGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMEARLF*LARGPA
Trigger: GGCCGGGCCCCTGGCGAGGCAGAAAAGCCTGGCTTC...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGCTGCCCCTGGCTTGGTaGATTCCATGGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVLPLAW*IPWGWE
Trigger: CTCCCAACCCCATGGAATGCACCAAGCCAGGGGCAG...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGTGGTAGAGCCGCACTaGCTGGCGCACGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPVVEPH*LAHAAA
Trigger: CGCGGCAGCGTGCGCCAGGCAGTGCGGCTCTACCAC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGATTATCCCCTCACCTCTaGCACTTACCTGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRLSPHL*HLPVPS
Trigger: AGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAA...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGGTCTTCCGCACCACGTaGTGTGTCCGTGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMVFRTT*CVRVNC
Trigger: GCAGTTCACACGGACACACCACGTGGTGCGGAAGAC...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCGTTGGCTGCAGGAGCTaGGTCCAGGAACCCCACGGA +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVVGCRS*VQEPHG
Trigger: TCCGTGGGGTTCCTGGACCCAGCTCCTGCAGCCAAC...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCTGGGGTGCTCCGGGCTaGAAAGGCAGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPETAVRLVKGPADWPHVWGAPG*KGSCCC
Trigger: ACAGCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCA...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGCTGCACTGGGGCCCCTaGAGCAGCTCCACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMLHWGP*SSSTGQ
Trigger: CTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAG...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATCTCACCAGATGCCTGTaGCACCTGGGCTGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHLTRCL*HLGWSR
Trigger: TCGAGACCAGCCCAGGTGCCACAGGCATCTGGTGAG...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGTACTGCGGGATATCTTaGCCATGGAACTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGYCGIS*PWNWWW
Trigger: CCACCACCAGTTCCATGGCCAAGATATCCCGCAGTA...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCGCTCAGGGCTGCCCCTaGCTTGGTGCATTCCATGGG +
Preference number: 4 (lower is better)
Translates to: SPETAVRLVKGPADWPHVAQGCP*LGAFHG
Trigger: CCCATGGAATGCACCAAGCCAGGGGCAGCCCTGAGC...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGCCACGGGAGTGCAGCTaGTGTGAGAGGGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVPRECS*CERGSA
Trigger: TGCACTTCCCCTCTCACACCAGCTGCACTCCCGTGG...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTTGGCTGGGGACACCCTaGAGGGCCAGATGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSWLGTP*RARWLC
Trigger: GCAGAGCCATCTGGCCCTCCAGGGTGTCCCCAGCCA...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGGGAAGGGCCAGGTTTaGAGCAGCTCAAGCGCACTC +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVGKGQV*SSSSAL
Trigger: GAGTGCGCTTGAGCTGCTCCAAACCTGGCCCTTCCC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CAA 72 bp GTGCCCATACGGTCCCCTGATGCTAGATGCTGTCCATaGGGGCTGACACACACCGAGCGGATGCCCACGCGG +
Preference number: 4 (lower is better)
Translates to: VPIRSPDARCCP*GLTHTERMPTR
Trigger: CCGCGTGGGCATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTATGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CAA 72 bp GTGGCCACTCTCTTGGGAGCCCAGCTGCTGTCAGGGTaGAGACGGCATCGTGGCAACAGCACAGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VATLLGAQLLSG*RRHRGNSTEAA
Trigger: GGCAGCCTCTGTGCTGTTGCCACGATGCCGTCTCAACCCTGACAGCAGCTGGGCTCCCAAGAGAGTGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGTGCTTGCCGCCCCGCTaGCGCTGGCGCAACTCGGCC +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGCLPPR*RWRNSA
Trigger: GGCCGAGTTGCGCCAGCGTCAGCGGGGCGGCAAGCA...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGTGCTTGCCGCCCCGCTaGCGCTGGCGCAACTCGGCC +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGCLPPR*RWRNSA
Trigger: GGCCGAGTTGCGCCAGCGTCAGCGGGGCGGCAAGCA...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTTGGGACCAGATGGGATaGTGGCCAGCGAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSWDQMG*WPASPG
Trigger: GCCAGGACTCGCTGGCCATCATCCCATCTGGTCCCA...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTTGGGACCAGATGGGATaGTGGCCAGCGAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPWDQMG*WPASPG
Trigger: GCCAGGACTCGCTGGCCATCATCCCATCTGGTCCCA...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTAGATGCCATCCACACTaGGGGGCTCCGTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LGPALGPLEQLHWPESQSRCHPH*GAPCSQ
Trigger: CTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCT...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATAGCTGCTGTCAGGGTTaGGACGGCATCGTGGCAACA +
Preference number: 4 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHSCCQG*DGIVAT
Trigger: TGTTGCCACGATGCCGTCTCAACCCTGACAGCAGCT...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCGAGCCCAGACCATCCTaGGCTTCGATCTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVEPRPS*ASISRD
Trigger: GTCTCGGGAGATCGAAGCTCAGGATGGTCTGGGCTC...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGATGTCCAGGACCAGGTaGGCCCGGCTGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEMSRTR*ARLGRA
Trigger: GGCCCTGCCCAGCCGGGCTCACCTGGTCCTGGACAT...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGAAGAGAAGGTGTCTCTaGGGAGCTGGGCAATCCGAC +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMKRRCL*GAGQSD
Trigger: GTCGGATTGCCCAGCTCCTCAGAGACACCTTCTCTT...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACGCGCAGCAGGGCGGGTaGAGGGGCTCTCGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDAQQGG*RGSRGL
Trigger: CAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGC...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCATGGTCCTTGCTGCTTaGCGCCCCGCTGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCMVLAA*RPADAG
Trigger: GCCAGCGTCAGCGGGGCGGCAAGCAGCAAGGACCAT...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTATGGTCCTTGCTGCTTaGCGCCCCGCTGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPMVLAA*RPADAG
Trigger: GCCAGCGTCAGCGGGGCGGCAAGCAGCAAGGACCAT...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCCCCCGGGCTGGAGCCTaGACTTGGAACTCACTGGTA +
Preference number: 4 (lower is better)
Translates to: APGGLAPLPLGCSPDACGPRAGA*TWNSLV
Trigger: TACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGG...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCTTCCACCTCCGGGGGTaGTCCAGGGGGATTGGCACC +
Preference number: 4 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCFHLRG*SRGIGT
Trigger: GGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAA...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGGCTGCCGCGGAGCTCTaGCACCAGCTGCTCACACTG +
Preference number: 4 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVAAAEL*HQLLTL
Trigger: CAGTGTGAGCAGCTGGTGGCAGAGCTCCGCGGCAGC...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCCTGCTGAGGGCATCTTaGAGCCAGCCACCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: APGGLAPLPLGCSPDACGLLRAS*SQPPSG
Trigger: ACCACTCGGTGGCTGGCTGCAAGATGCCCTCAGCAG...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGAGCAGGGCCTGTGTCTaGTCGGCTCCCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMSRACV*SAPTAP
Trigger: TGGGGCTGTGGGAGCCGAGCAGACACAGGCCCTGCT...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGAACAGTTCTGAGTATTaGTCCAGCAGGGCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGNSSEY*SSRACV
Trigger: GACACAGGCCCTGCTGGAGCAATACTCAGAACTGTT...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGAAGCATCATTCAGGATaGAGGGAGAAGGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGKHHSG*REKVAS
Trigger: AGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTT...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTTGCAGCTCGGCCACCTaGCTGTGCTCTGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPCSSAT*LCSATS
Trigger: GGACGTGGCAGAGCACAGCCAGGTGGCCGAGCTGCA...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCTGTCCCCAGAGCATaGGGTCGGGGCAAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVSVPRA*GRGKVL
Trigger: TAGCACCTTGCCCCGACCCCATGCTCTGGGGACAGA...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCCCTTTGGGGAGAGGATaGTCCTTGCTGCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: APGGLAPLPLGCSPDACGPLGRG*SLLLAA
Trigger: GGCGGCAAGCAGCAAGGACCATCCTCTCCCCAAAGG...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGGGGGCAAAGCTGGGCTaGGGACCGAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLGAKLG*GPRPVP
Trigger: AGGCACTGGCCTCGGTCCCCAGCCCAGCTTTGCCCC...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCAGGGTCCTGCAGGCTTaGGGCCAGTGTTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPETAVRLVKGPADWPHVRVLQA*GQCFQL
Trigger: CAGCTGGAAACACTGGCCCCAAGCCTGCAGGACCCT...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGCTCCAGCAGCCGGCTaGGGTCCAGGGTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPAPAAG*GPGWRT
Trigger: TGTCCTCCACCCTGGACCCCAGCCGGCTGCTGGAGC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGTATCCAGCACACCCGTaGGTGCCCAGCACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVYPAHP*VPSTAF
Trigger: AAAGGCAGTGCTGGGCACCCACGGGTGTGCTGGATA...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGTACTCCTGCGCAGTTTaGTGGATGGAGATCTCAACA +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGYSCAV*WMEIST
Trigger: TGTTGAGATCTCCATCCATCAAACTGCGCAGGAGTA...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCAGCTGTCCATTGGGGCTaGCACACACCGAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQAAVHWG*HTPSGC
Trigger: GCATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGC...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCCGTGGTGTGTCCGTGTaGACTGCACTCCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVRGVSV*TALHLQ
Trigger: CTGGAGATGGAGTGCAGTTCACACGGACACACCACG...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTCAAGGTTGGGAAGCCTaGGGCCGAGGGGGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSQGWEA*GRGGFS
Trigger: TGAAAAGCCCCCTCGGCCTCAGGCTTCCCAACCTTG...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCGATACTCCGAGACTCTaGCCTCTCTGGGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: APLPLGCSPDACGTWAGLDTPRL*PLWDLH
Trigger: GTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATC...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCCAGCTTGCTGAGTGGTaGGACTCGGATGGGGGCATG +
Preference number: 4 (lower is better)
Translates to: MREPVQETALMGPGAGWVQLAEW*DSDGGM
Trigger: CATGCCCCCATCCGAGTCTCACCACTCAGCAAGCTG...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGCTCTCAGTTGTACTGTaGGCTTTTCCTAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMLSVVL*AFPRPT
Trigger: GGTGGGCCTAGGAAAAGCTCACAGTACAACTGAGAG...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCGCACGGCAGGCATGTaGCCACTCTCTCCAGTGACC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPRTAGM*PLSPVT
Trigger: GGTCACTGGAGAGAGTGGGCACATGCCTGCCGTGCG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCACGCACGGCAGGCATGTaGCCACTCTCTCCAGTGACC +
Preference number: 4 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQARTAGM*PLSPVT
Trigger: GGTCACTGGAGAGAGTGGGCACATGCCTGCCGTGCG...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGCACCTGGCTGTGCTCTaGCACGTCCCAAACCCGCAC +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMHLAVL*HVPNPH
Trigger: GTGCGGGTTTGGGACGTGGCAGAGCACAGCCAGGTG...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGTCGGCCACCTGGCTGTaGTCTGCCACGTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMSATWL*SATSQT
Trigger: GGTTTGGGACGTGGCAGAGCACAGCCAGGTGGCCGA...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGTGGAGGGTGGAGCCATaGACCCCGGAGCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMWRVEP*TPELSV
Trigger: CACAGAGAGCTCCGGGGTGCATGGCTCCACCCTCCA...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512970.5
CDS-3UTR GCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGCCAGTGTTTCCAGCTaGCGCAGATCCAGCATGGAT +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVASVSS*RRSSMD
Trigger: ATCCATGCTGGATCTGCGGCAGCTGGAAACACTGGC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp CGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCCCCTAGGGCCTCCTGCCCATaGTTCCTGGGACCAGATGGG +
Preference number: 4 (lower is better)
Translates to: REEILRDSDLSGTCTGAPRASCP*FLGPDG
Trigger: CCCATCTGGTCCCAGGAAGCATGGGCAGGAGGCCCT...AGGGGCCCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTCCATTGCCTCTCGGCTaGTCACCAGATGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSPLPLG*SPDACG
Trigger: GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGG...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCGAAGCCAGGCTTTTCTaGCTCGCCAGGGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSEARLF*LARGPA
Trigger: GGCCGGGCCCCTGGCGAGGCAGAAAAGCCTGGCTTC...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGGAAGCCAGGCTTTTCTaGCTCGCCAGGGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEEARLF*LARGPA
Trigger: GGCCGGGCCCCTGGCGAGGCAGAAAAGCCTGGCTTC...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCGCTGGGCACAGGGGCTaGTGGGCCCAGGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPAGHRG*WAQDEP
Trigger: AGGCTCATCCTGGGCCCAGCAGCCCCTGTGCCCAGC...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGAACCAGCTGCTCACACTaGTCCAGGCTCACCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRTSCSH*SRLTAG
Trigger: GCCAGCGGTGAGCCTGGAGCAGTGTGAGCAGCTGGT...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTCTGCCTGGCGCACGCTaGCGCGGAGCTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSLPGAR*RGALPP
Trigger: TGGTGGCAGAGCTCCGCGGCAGCGTGCGCCAGGCAG...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGCTGCCTGGCGCACGCTaGCGCGGAGCTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGLPGAR*RGALPP
Trigger: TGGTGGCAGAGCTCCGCGGCAGCGTGCGCCAGGCAG...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTGTGGTAGAGCCGCACTaGCTGGCGCACGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSVVEPH*LAHAAA
Trigger: CGCGGCAGCGTGCGCCAGGCAGTGCGGCTCTACCAC...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATCTGAACACTGCTCCCTaGTTTCCACTCCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHLNTAP*FPLQAA
Trigger: GGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAG...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGCCAGAGCTTCATGTTTaGCCAGGTGAGGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMPELHV*PGEGLL
Trigger: CAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGG...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGTTCACTTAGTGTACTaGACCCCTTTTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGVHLVY*TPFLLP
Trigger: AGGGAGCAGAAAAGGGGTGCAGTACACTAAGTGAAC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGCTTCGGGGCAAAGCTaGGCTGGGGACCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGASGQS*AGDRGQ
Trigger: CTGGCCTCGGTCCCCAGCCCAGCTTTGCCCCGAAGC...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCCGACTCATCTCCCAGTaGGACAGGCTTCGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SPETAVRLVKGPADWPHVRLISQ*DRLRGK
Trigger: TTTGCCCCGAAGCCTGTCCCACTGGGAGATGAGTCG...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCCGACTCATCTCCCAGTaGGACAGGCTTCGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVRLISQ*DRLRGK
Trigger: TTTGCCCCGAAGCCTGTCCCACTGGGAGATGAGTCG...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTATGGCCAGCGAGTCCTaGCTAGGGTCCTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPMASES*LGSCRL
Trigger: AAGCCTGCAGGACCCTAGCCAGGACTCGCTGGCCAT...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCCACTGGTATCCATGGTaGGGTTGTCACTCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SPETAVRLVKGPADWPHVHWYPW*GCHSAP
Trigger: CGGAGCCGAGTGACAACCCCACCATGGATACCAGTG...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGACTCACTGGTATCCATaGTGGGGTTGTCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMTHWYP*WGCHSA
Trigger: AGCCGAGTGACAACCCCACCATGGATACCAGTGAGT...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTTGGGGTGCTCCGGGCTaGAAAGGCAGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPWGAPG*KGSCCC
Trigger: ACAGCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCA...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGCTGGAGCAGCTCCACTaGCCAGAGTCTCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVLEQLH*PESQSA
Trigger: AGCACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAG...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATCTGGAGCAGCTCCACTaGCCAGAGTCTCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHLEQLH*PESQSA
Trigger: AGCACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAG...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCTGCACTGGGGCCCCTaGAGCAGCTCCACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSLHWGP*SSSTGQ
Trigger: CTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAG...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCGTCCAGAAAAGGGGCTaGCTGTGGCCACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: APGGLAPLPLGCSPDACGVQKRG*LWPLSW
Trigger: CCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGAC...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTGTCCAGAAAAGGGGCTaGCTGTGGCCACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LGPALGPLEQLHWPESQSVQKRG*LWPLSW
Trigger: CCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGAC...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTCGGACGGCCATCAGCTaGGGGCAGGGAGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSRTAIS*GQGAQT
Trigger: GGTCTGGGCTCCCTGCCCCCAGCTGATGGCCGTCCG...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACGGGCACAGGGGCTGCTaGGCCCAGGATGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHGHRGC*AQDEPG
Trigger: GCCAGGCTCATCCTGGGCCCAGCAGCCCCTGTGCCC...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCGGGCACAGGGGCTGCTaGGCCCAGGATGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSGHRGC*AQDEPG
Trigger: GCCAGGCTCATCCTGGGCCCAGCAGCCCCTGTGCCC...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCCCCTCCCACGAGGAGCGGCTaGGAAGGCTGCTTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: REEILRDSDLSGTCTGAPPTRSG*EGCFAS
Trigger: AGAGGCAAAGCAGCCTTCCCAGCCGCTCCTCGTGGG...AGGGGCCCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTCCCTGGAGGGCCAGATaGCTCTGCCTTTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSPWRAR*LCLSEL
Trigger: GAGCTCAGAAAGGCAGAGCCATCTGGCCCTCCAGGG...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTGGCTGGGGACACCCTaGAGGGCCAGATGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLWLGTP*RARWLC
Trigger: GCAGAGCCATCTGGCCCTCCAGGGTGTCCCCAGCCA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGGGGCAAATCTGGAGTaGGGCGGCGGTTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSGANLE*GGGCRW
Trigger: CCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CAA 72 bp CACTGTCTGATGAGAGAGCCGGTCCAGGAGACAGCATaGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: HCLMREPVQETA*MGPGAGWVQKP
Trigger: GGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCATCAGACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGTTTTCCTGGAACTGTTaGGGATGTGGTGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGFSWNC*GCGAVC
Trigger: ACAAACAGCACCACATCCTCAACAGTTCCAGGAAAA...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CAGCTCGGCCACCTGGCTGTGCTCTGCCACGTCCCAAACCCGCACGGCAGGCATAGTGGCATTCACCTTTaGGGTCTTGCTGTCATCGAG +
Preference number: 4 (lower is better)
Translates to: QLGHLAVLCHVPNPHGRHSGIHL*GLAVIE
Trigger: CTCGATGACAGCAAGACCTCAAAGGTGAATGCCACT...ATGCCTGCCGTGCGGGTTTGGGACGTGGCAGAGCACAGCCAGGTGGCCGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR TCA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCAGCAGCCCTGAGGACGTaGTGCAGAAGGTACTGTCCG +
Preference number: 4 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQAAALRT*CRRYCP
Trigger: CGGACAGTACCTTCTGCATCACGTCCTCAGGGCTGC...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCGGCAATGTAGATCCCTaGGGGGTCTGTCTGCACCTT +
Preference number: 4 (lower is better)
Translates to: SPETAVRLVKGPADWPHVGNVDP*GVCLHL
Trigger: AAGGTGCAGACAGACCCCTCAGGGATCTACATTGCC...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCGGCCACGCACTCGCCTaGGGAGAAGTCAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVGHALA*GEVKNG
Trigger: TCCATTTTTGACTTCTCCTCAGGCGAGTGCGTGGCC...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTGGGACCAGATGGGATaGTGGCCAGCGAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLWDQMG*WPASPG
Trigger: GCCAGGACTCGCTGGCCATCATCCCATCTGGTCCCA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCCCCTCAAGGTTGGGAAGCCTaGGGCCGAGGGGGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: REEILRDSDLSGTCTGAPQGWEA*GRGGFS
Trigger: TGAAAAGCCCCCTCGGCCTCAGGCTTCCCAACCTTG...AGGGGCCCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTAGATGCCATCCACACTaGGGGGCTCCGTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPRCHPH*GAPCSQ
Trigger: CTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCT...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGAGATGCCATCCACACTaGGGGGCTCCGTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVRCHPH*GAPCSQ
Trigger: CTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCT...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTGATACTCCGAGACTCTaGCCTCTCTGGGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSDTPRL*PLWDLH
Trigger: GTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATC...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCACAGCTTGCTGAGTGGTaGGACTCGGATGGGGGCATG +
Preference number: 4 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQAQLAEW*DSDGGM
Trigger: CATGCCCCCATCCGAGTCTCACCACTCAGCAAGCTG...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCCGACTTTGCTCTGCTaGGGGCATCTTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPPTLLC*GHLAAS
Trigger: GCTGGCTGCAAGATGCCCTCAGCAGAGCAAAGTCGG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTCAGCTCCTGTCGCACTaGAGAGAAGGTGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LGPALGPLEQLHWPESQSQLLSH*REGVSE
Trigger: CTCAGAGACACCTTCTCTTCAGTGCGACAGGAGCTG...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCAGGCTGCTTTGCCTCTaGACACTGCTCCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: APLPLGCSPDACGTWAGLRLLCL*TLLPAF
Trigger: GAAAGCAGGGAGCAGTGTTCAGAGGCAAAGCAGCCT...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTGATCTCATCTGTGGCTaGGGTCCTCAGGAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSDLICG*GPQEVG
Trigger: GCCTACCTCCTGAGGACCTCAGCCACAGATGAGATC...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTCAAGCGCACTCAGGCTaGTGCCCCGGAGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGQAHSG*CPGAGN
Trigger: GTTCCCAGCTCCGGGGCATCAGCCTGAGTGCGCTTG...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCCCATGCAGCCGAGGATaGGGCAGGAAGCGCCGCGAC +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLPCSRG*GRKRRD
Trigger: GTCGCGGCGCTTCCTGCCTCATCCTCGGCTGCATGG...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTCCATGCAGCCGAGGATaGGGCAGGAAGCGCCGCGAC +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGPCSRG*GRKRRD
Trigger: GTCGCGGCGCTTCCTGCCTCATCCTCGGCTGCATGG...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTCTTGGCTCACAGAGATaGAGTGGGCCACTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPLGSQR*SGPLWS
Trigger: GGACCACAGTGGCCCACTGCATCTCTGTGAGCCAAG...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCAACTCGGCCAGACGCTaGCTCATGCTGATGGTCATC +
Preference number: 4 (lower is better)
Translates to: APGGLAPLPLGCSPDACGNSARR*LMLMVI
Trigger: GATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTT...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGGGGGACCGAGGCCAGTaGCTTCTTGGTACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMGDRGQ*LLGTLG
Trigger: GCCAAGAGTACCAAGAAGGCACTGGCCTCGGTCCCC...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTCCCCGGGCTGGAGCCTaGACTTGGAACTCACTGGTA +
Preference number: 4 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGPRAGA*TWNSLV
Trigger: TACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGG...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGCTTTTCTGAGCTCCTaGTGCCTGGGTACACTCTTC +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVAFLSS*CLGTLF
Trigger: GAAGAGTGTACCCAGGCAGCAGGAGCTCAGAAAAGC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCGGCTGGAAAGGCAGCTaGTGCTGTAATCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: SPETAVRLVKGPADWPHVGWKGS*CCNPQS
Trigger: GCTCTGTGGATTACAGCAGCAGCTGCCTTTCCAGCC...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTGCTGCGGCTGGAAAGGCAGCTaGTGCTGTAATCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: PCSQSLQWGAPGWKGSCCGWKGS*CCNPQS
Trigger: GCTCTGTGGATTACAGCAGCAGCTGCCTTTCCAGCC...GCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGGAGTCTTCAGTGGGGTaGTCCGGGCTGGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMESSVG*SGLERQ
Trigger: CTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTC...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGCTGGAGTCTGGGGGCTaGCCTCCTGTAGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLLESGG*PPVAHR
Trigger: CCTATGGGCTACAGGAGGGCAGCCCCCAGACTCCAG...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGCCAGAGTCTCAAAGTaGTGTTTTAGAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGARVSK*CFRNCS
Trigger: GGAGCAGTTTCTAAAACAGCACTTTGAGACTCTGGC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCACCATTGCCTCTCGGCTaGTCACCAGATGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQAPLPLG*SPDACG
Trigger: GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGG...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCTGTGGCACCAGACTGTaGACAGACTGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: MREPVQETALMGPGAGWVCGTRL*TDWAFW
Trigger: CCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACA...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CCATGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGGCTGGGCACAGGGGCTaGTGGGCCCAGGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: PWWGCHSAPGRQYHLQWVAGHRG*WAQDEP
Trigger: AGGCTCATCCTGGGCCCAGCAGCCCCTGTGCCCAGC...CACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGGCTGCCGCGGAGCTCTaGCACCAGCTGCTCACACTG +
Preference number: 4 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQAAAEL*HQLLTL
Trigger: CAGTGTGAGCAGCTGGTGGCAGAGCTCCGCGGCAGC...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTTGGGGAAAACCACCCTaGTCTGGCAGCCACGGGAGT +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPWGKPP*SGSHGS
Trigger: ACTCCCGTGGCTGCCAGAGCAGGGTGGTTTTCCCCA...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGCCTCAACTCTTCAACTaGCTCACGACATGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVPQLFN*LTTWSH
Trigger: GTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGG...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGCGGTGGCCTCAGACATaGAGAAGGGGACGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGRWPQT*RRGRGA
Trigger: GGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCG...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGAGTGGGGCGGCGGTTaGCGGTGGCCTCAGACATGC +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGEWGGG*RWPQTC
Trigger: GCATGTCTGAGGCCACCGGCAACCGCCGCCCCACTC...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGTGCAGCTCGGCCACCTaGCTGTGCTCTGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGECSSAT*LCSATS
Trigger: GGACGTGGCAGAGCACAGCCAGGTGGCCGAGCTGCA...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCCTGCTGTCACCCGACTaGACACCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: MREPVQETALMGPGAGWVLLSPD*TPCWRP
Trigger: TGGCCTCCAACAAGGTGTCCAGTCGGGTGACAGCAG...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTCTGCTGTCACCCGACTaGACACCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSLLSPD*TPCWRP
Trigger: TGGCCTCCAACAAGGTGTCCAGTCGGGTGACAGCAG...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCTGTCCCCAGAGCATaGGGTCGGGGCAAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCSVPRA*GRGKVL
Trigger: TAGCACCTTGCCCCGACCCCATGCTCTGGGGACAGA...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTGGGGGCAGGCAGGCCTaGTTACTATCCTTCACCTCG +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPGGRQA*LLSFTS
Trigger: CGAGGTGAAGGATAGTAACCAGGCCTGCCTGCCCCC...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTGTTTCGGTGGAGGGTaGAGCCATGCACCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLCFGGG*SHAPRS
Trigger: GCTCCGGGGTGCATGGCTCCACCCTCCACCGAAACA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCCCAGAGTTCCCCGGGCTGGAGCCTGCACTTGGAACTCACTGGTATCCATGGTTGTTTCGGTGGAGGGTaGAGCCATGCACCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SQSSPGWSLHLELTGIHGCFGGG*SHAPRS
Trigger: GCTCCGGGGTGCATGGCTCCACCCTCCACCGAAACA...ACCATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512970.5
CDS-3UTR CCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCAGTGGCCAAACATGGTaGCCACGCACTCGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCSGQTW*PRTRLR
Trigger: CCTCAGGCGAGTGCGTGGCCACCATGTTTGGCCACT...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCGGGGCAAAGCTGGGCTaGGGACCGAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSGAKLG*GPRPVP
Trigger: AGGCACTGGCCTCGGTCCCCAGCCCAGCTTTGCCCC...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCAGGGTCCTGCAGGCTTaGGGCCAGTGTTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCRVLQA*GQCFQL
Trigger: CAGCTGGAAACACTGGCCCCAAGCCTGCAGGACCCT...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTATGGCCAGCGAGTCCTaGCTAGGGTCCTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGMASES*LGSCRL
Trigger: AAGCCTGCAGGACCCTAGCCAGGACTCGCTGGCCAT...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTCACTGGTATCCATGGTaGGGTTGTCACTCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPHWYPW*GCHSAP
Trigger: CGGAGCCGAGTGACAACCCCACCATGGATACCAGTG...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTGGGGTGCTCCGGGCTaGAAAGGCAGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLWGAPG*KGSCCC
Trigger: ACAGCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCCTGGAGCAGCTCCACTaGCCAGAGTCTCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: APLPLGCSPDACGTWAGLLEQLH*PESQSA
Trigger: AGCACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAG...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACCTGCACTGGGGCCCCTaGAGCAGCTCCACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHLHWGP*SSSTGQ
Trigger: CTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAG...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTCTCACCAGATGCCTGTaGCACCTGGGCTGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGLTRCL*HLGWSR
Trigger: TCGAGACCAGCCCAGGTGCCACAGGCATCTGGTGAG...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTGTTGAGACGGCATCGTaGCAACAGCACAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSVETAS*QQHRGC
Trigger: GCAGCCTCTGTGCTGTTGCCACGATGCCGTCTCAAC...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGCTGTGGCCACTCTCTTaGGAGCCCAGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMLWPLS*EPSCCQ
Trigger: CTGACAGCAGCTGGGCTCCCAAGAGAGTGGCCACAG...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCCGGACGGCCATCAGCTaGGGGCAGGGAGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFRTAIS*GQGAQT
Trigger: GGTCTGGGCTCCCTGCCCCCAGCTGATGGCCGTCCG...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATTACTGCGGGATATCTTaGCCATGGAACTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHYCGIS*PWNWWW
Trigger: CCACCACCAGTTCCATGGCCAAGATATCCCGCAGTA...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCGTGGTGAGACTCGGATaGGGGCATGAGCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: APGGLAPLPLGCSPDACGVVRLG*GHELEV
Trigger: AACCTCAAGCTCATGCCCCCATCCGAGTCTCACCAC...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGGTCAGGCAGTGGTTTaGGGATGTCCAGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPGQAVV*GCPGPG
Trigger: ACCTGGTCCTGGACATCCCCAAACCACTGCCTGACC...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACGGGCACAGGGGCTGCTaGGCCCAGGATGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GRVCTCNRNREEILRDSDGHRGC*AQDEPG
Trigger: GCCAGGCTCATCCTGGGCCCAGCAGCCCCTGTGCCC...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGGAAGAGGCTGCTGACTaGCAGTTGCTGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVEEAAD*QLLGTG
Trigger: CCCTGTGCCCAGCAACTGCCAGTCAGCAGCCTCTTC...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGAGAGGGGCTGCAGTTTaGAATCGCTGGAGCATTCAT +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMRGAAV*NRWSIH
Trigger: ATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCT...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCCACGGGAGTGCAGCTaGTGTGAGAGGGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPPRECS*CERGSA
Trigger: TGCACTTCCCCTCTCACACCAGCTGCACTCCCGTGG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTGGAGAAGGTGGCCTCTaGGCTCCAGCAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSGEGGL*APAAGW
Trigger: CCAGCCGGCTGCTGGAGCCCAGAGGCCACCTTCTCC...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGTGGGCGCGGCTGGTGTaGGAAGTCGGGGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGWARLV*EVGAQQ
Trigger: CTGCTGTGCCCCGACTTCCCACACCAGCCGCGCCCA...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACGGGGCAAATCTGGAGTaGGGCGGCGGTTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDGANLE*GGGCRW
Trigger: CCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCC...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCCTCCAGGCTCACCGCTaGCTCAGATGCCTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPLQAHR*LRCLWH
Trigger: GTGCCACAGGCATCTGAGCCAGCGGTGAGCCTGGAG...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514566.5
3UTR CAA 72 bp AGGGCCAGATGGCTCTGCCTTTCTGAGCTCCAGGTATaGGGGAAAACCACCCTGCTCTGGCAGCCACGGGAG +
Preference number: 4 (lower is better)
Translates to: RARWLCLSELQV*GKTTLLWQPRE
Trigger: CTCCCGTGGCTGCCAGAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAGAAAGGCAGAGCCATCTGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGCTTCCACAGCCATTATaGCGAGAAACCCTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVLPQPL*RETLWD
Trigger: GTCCCAAAGGGTTTCTCGTCATAATGGCTGTGGAAG...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCCCGGCTGGTAATGGTTaGCCCTTCCACAGCCATTAT +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVPAGNG*PFHSHY
Trigger: ATAATGGCTGTGGAAGGGTCAACCATTACCAGCCGG...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGAGAAGGCAAGGGCAGTaGTGGTTTTCCTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVRRQGQ*WFSWNC
Trigger: ACAGTTCCAGGAAAACCATCACTGCCCTTGCCTTCT...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGCAGCCCTGAGGACGTaGTGCAGAAGGTACTGTCCG +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPAALRT*CRRYCP
Trigger: CGGACAGTACCTTCTGCATCACGTCCTCAGGGCTGC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTAAAGCCTTCGATCACTaGACTCGCACAGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPKAFDH*TRTAAL
Trigger: CAGGGCTGCTGTGCGAGTTCAGTGATCGAAGGCTTT...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTGCTGCCAGACGCAGGAAGAATaGTACAGAGCCGAGTACACC +
Preference number: 4 (lower is better)
Translates to: PCSQSLQWGAPGWKGSCCQTQEE*YRAEYT
Trigger: GGTGTACTCGGCTCTGTATCATTCTTCCTGCGTCTG...GCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR TCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTGCTTGCCGCCCCGCTaGCGCTGGCGCAACTCGGCC +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGCLPPR*RWRNSA
Trigger: GGCCGAGTTGCGCCAGCGTCAGCGGGGCGGCAAGCA...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTCCAGGAGACAGCATTaGTGGGGCCTGGTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLSRRQH*WGLVPV
Trigger: AACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTAGTTCCACACCTGGCTaGACCCAGCGCCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGSSTPG*TQRPLL
Trigger: AAGAAGAGGGCGCTGGGTTCAGCCAGGTGTGGAACT...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGCAAGGTTGGGAAGCCTaGGGCCGAGGGGGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLQGWEA*GRGGFS
Trigger: TGAAAAGCCCCCTCGGCCTCAGGCTTCCCAACCTTG...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTAGCTGCTGTCAGGGTTaGGACGGCATCGTGGCAACA +
Preference number: 4 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGSCCQG*DGIVAT
Trigger: TGTTGCCACGATGCCGTCTCAACCCTGACAGCAGCT...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCCAGCAGTGCGCCTGGTaGAGGGGCCTGCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: CNRNREEILRDSDLSGTCQQCAW*RGLQTG
Trigger: GCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTG...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGAGCCCAGACCATCCTaGGCTTCGATCTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPEPRPS*ASISRD
Trigger: GTCTCGGGAGATCGAAGCTCAGGATGGTCTGGGCTC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp ATACGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGCCGACTTTGCTCTGCTaGGGGCATCTTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: IRSPDARCCPLGLTHTERPTLLC*GHLAAS
Trigger: GCTGGCTGCAAGATGCCCTCAGCAGAGCAAAGTCGG...CCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTAGGCCCACAGTTGGCTaGCGGGCACTGAATACCACA +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPRPTVG*RALNTT
Trigger: TGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCT...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCGCGCAGCAGGGCGGGTaGAGGGGCTCTCGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSAQQGG*RGSRGL
Trigger: CAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGC...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTACTCCTAACCTCAGGTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGTPNLR*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACCTGAGGTTAGGAGT...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCCCCAGAGGGCGAACCTaGGTCCCACCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFPRGRT*VPPAVG
Trigger: GCCCACCGCAGGTGGGACTCAGGTTCGCCCTCTGGG...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACGTAGCTCCCTCCTCGTaGAGGACCTGGCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDVAPSS*RTWPRG
Trigger: CCCTCTGGGCCAGGTCCTTCACGAGGAGGGAGCTAC...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCCTCTCGTCGGTTTCCTaGCTTACTCCTGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: SPETAVRLVKGPADWPHVLSSVS*LTPAQF
Trigger: AAACTGCGCAGGAGTAAGGCAGGAAACCGACGAGAG...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGACACCTGGCTGTGCTCTaGCACGTCCCAAACCCGCAC +
Preference number: 4 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGHLAVL*HVPNPH
Trigger: GTGCGGGTTTGGGACGTGGCAGAGCACAGCCAGGTG...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTTCGGCCACCTGGCTGTaGTCTGCCACGTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSSATWL*SATSQT
Trigger: GGTTTGGGACGTGGCAGAGCACAGCCAGGTGGCCGA...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCTTGGCTCACAGAGATaGAGTGGGCCACTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPLGSQR*SGPLWS
Trigger: GGACCACAGTGGCCCACTGCATCTCTGTGAGCCAAG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGCACACACCGAGCGGATaGCCACGCGGGGATCCAACA +
Preference number: 4 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQHTPSG*PRGDPT
Trigger: TGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCATGTTCGTCCAGCGTCTaGTGTAGGCTGTACTCCCGC +
Preference number: 4 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQACSSSV*CRLYSR
Trigger: GCGGGAGTACAGCCTACAGCAGACGCTGGACGAACA...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTCTGATCATGCGGACTTaGCCATCACTGGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LGPALGPLEQLHWPESQSLIMRT*PSLAAN
Trigger: GTTTGCAGCCAGTGATGGGCAAGTCCGCATGATCAG...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCCAGTGCGGAAGTAGATaGTCTTGTCTGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: APGGLAPLPLGCSPDACGQCGSR*SCLLHS
Trigger: GCTGTGGAGCAGACAAGAGCATCTACTTCCGCACTG...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAGGGCCTCCTGCCCATaGTTCCTGGGACCAGATGGG +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSRASCP*FLGPDG
Trigger: CCCATCTGGTCCCAGGAAGCATGGGCAGGAGGCCCT...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTTGGAAAGGCAGCTGCTaGTGTAATCCACAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGPALGPLEQLHWPESQSWKGSC*CNPQSR
Trigger: CCTGCTCTGTGGATTACAGCAGCAGCTGCCTTTCCA...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGCCCATAGGGGCCCATaGCTCCCTCCTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPAHRGP*LPPLLP
Trigger: AGGAAGAAGAGGAGGGAGGCATGGGCCCCTATGGGC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACTTCCACCTCCGGGGGTaGTCCAGGGGGATTGGCACC +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHFHLRG*SRGIGT
Trigger: GGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAA...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCCTGCCCCTGGCTTGGTaGATTCCATGGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPLPLAW*IPWGWE
Trigger: CTCCCAACCCCATGGAATGCACCAAGCCAGGGGCAG...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCACCAGCTGCTCACACTaGTCCAGGCTCACCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSTSCSH*SRLTAG
Trigger: GCCAGCGGTGAGCCTGGAGCAGTGTGAGCAGCTGGT...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGACCAGCTGCTCACACTaGTCCAGGCTCACCGCTGGC +
Preference number: 4 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQTSCSH*SRLTAG
Trigger: GCCAGCGGTGAGCCTGGAGCAGTGTGAGCAGCTGGT...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGAAGCGGCTGGGAAGGCTaGTTTGCCTCTGAACACTGC +
Preference number: 4 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRSGWEG*FASEHC
Trigger: GCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGCCGCT...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACCACCGCTGGCTCAGATaGCTGTGGCACCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHHRWLR*LWHLGW
Trigger: CCAGCCCAGGTGCCACAGGCATCTGAGCCAGCGGTG...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514566.5
CDS-3UTR CCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTTCCCCGGCCCAGTCCTaGGTCTTGTCTCAACAGCGG +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSSPAQS*VLSQQR
Trigger: CCGCTGTTGAGACAAGACCCAGGACTGGGCCGGGGA...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGTCCCCGGCCCAGTCCTaGGTCTTGTCTCAACAGCGG +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGESPAQS*VLSQQR
Trigger: CCGCTGTTGAGACAAGACCCAGGACTGGGCCGGGGA...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGTGCAGCTCGGCCACCTaGCTGTGCTCTGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: RNREEILRDSDLSGTCTGCSSAT*LCSATS
Trigger: GGACGTGGCAGAGCACAGCCAGGTGGCCGAGCTGCA...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCTGTTTCGGTGGAGGGTaGAGCCATGCACCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSCFGGG*SHAPRS
Trigger: GCTCCGGGGTGCATGGCTCCACCCTCCACCGAAACA...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTGTCTTCCGCACCACGTaGTGTGTCCGTGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGVFRTT*CVRVNC
Trigger: GCAGTTCACACGGACACACCACGTGGTGCGGAAGAC...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCCCTTTGGGGAGAGGATaGTCCTTGCTGCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPPLGRG*SLLLAA
Trigger: GGCGGCAAGCAGCAAGGACCATCCTCTCCCCAAAGG...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTGGTCCAGAAGCCCTTTaGGGAGAGGATGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPGPEAL*GEDGPC
Trigger: GCAAGGACCATCCTCTCCCCAAAGGGCTTCTGGACC...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCGGGCCTGGTGCCGGTTaGGTCCAGAAGCCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSGPGAG*VQKPFG
Trigger: CCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCC...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTAGCATTGATGGGGCCTaGTGCCGGTTGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPSIDGA*CRLGPE
Trigger: TTCTGGACCCAACCGGCACCAGGCCCCATCAATGCT...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTAGCATTGATGGGGCCTaGTGCCGGTTGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGSIDGA*CRLGPE
Trigger: TTCTGGACCCAACCGGCACCAGGCCCCATCAATGCT...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACAGGGGCAAAGCTGGGCTaGGGACCGAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: MVISELRRHTNMQLSPDTGAKLG*GPRPVP
Trigger: AGGCACTGGCCTCGGTCCCCAGCCCAGCTTTGCCCC...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGTTGGCTGCAGGAGCTaGGTCCAGGAACCCCACGGA +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGVGCRS*VQEPHG
Trigger: TCCGTGGGGTTCCTGGACCCAGCTCCTGCAGCCAAC...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCAGGGTCCTGCAGGCTTaGGGCCAGTGTTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPRVLQA*GQCFQL
Trigger: CAGCTGGAAACACTGGCCCCAAGCCTGCAGGACCCT...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCGCAGGTTCCAGATCTTaGGCAAAGACCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: APLPLGCSPDACGTWAGLAGSRS*AKTPSS
Trigger: AGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCACTCACTGGTATCCATaGTGGGGTTGTCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVTHWYP*WGCHSA
Trigger: AGCCGAGTGACAACCCCACCATGGATACCAGTGAGT...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGATGGGGTGCTCCGGGCTaGAAAGGCAGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGWGAPG*KGSCCC
Trigger: ACAGCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCA...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGGATGCCTGTGGCACCTaGGCTGGTCTCGACATCAGT +
Preference number: 4 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVDACGT*AGLDIS
Trigger: ACTGATGTCGAGACCAGCCCAGGTGCCACAGGCATC...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTAAGGGGCCTGCAGACTaGCCTCATGTCTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPKGPAD*PHVFPV
Trigger: CACAGGAAAGACATGAGGCCAGTCTGCAGGCCCCTT...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTGCTGCTGGCCATGGAACTGGTaGTGGGGTTCTGATAGGAGT +
Preference number: 4 (lower is better)
Translates to: PCSQSLQWGAPGWKGSCCWPWNW*WGSDRS
Trigger: ACTCCTATCAGAACCCCACCACCAGTTCCATGGCCA...GCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTTGGCCATGGAACTGGTaGTGGGGTTCTGATAGGAGT +
Preference number: 4 (lower is better)
Translates to: LGPALGPLEQLHWPESQSWPWNW*WGSDRS
Trigger: ACTCCTATCAGAACCCCACCACCAGTTCCATGGCCA...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCTACTGCGGGATATCTTaGCCATGGAACTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: APLPLGCSPDACGTWAGLYCGIS*PWNWWW
Trigger: CCACCACCAGTTCCATGGCCAAGATATCCCGCAGTA...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCGTGGTGAGACTCGGATaGGGGCATGAGCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: MREPVQETALMGPGAGWVVVRLG*GHELEV
Trigger: AACCTCAAGCTCATGCCCCCATCCGAGTCTCACCAC...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGGGTCAGGCAGTGGTTTaGGGATGTCCAGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVGQAVV*GCPGPG
Trigger: ACCTGGTCCTGGACATCCCCAAACCACTGCCTGACC...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp ATACGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGGAAGAGGCTGCTGACTaGCAGTTGCTGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: IRSPDARCCPLGLTHTEREEAAD*QLLGTG
Trigger: CCCTGTGCCCAGCAACTGCCAGTCAGCAGCCTCTTC...CCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGGCTCAGGGCTGCCCCTaGCTTGGTGCATTCCATGGG +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEAQGCP*LGAFHG
Trigger: CCCATGGAATGCACCAAGCCAGGGGCAGCCCTGAGC...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTGCGATGCTAGAGGAGTaGGGAAGGGCCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPAMLEE*GRARFG
Trigger: TCCAAACCTGGCCCTTCCCCACTCCTCTAGCATCGC...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACGGCGGCGGTTGCCGGTaGCCTCAGACATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDGGGCR*PQTCRR
Trigger: CCTTCTGCATGTCTGAGGCCACCGGCAACCGCCGCC...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACGGCGGCGGTTGCCGGTaGCCTCAGACATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHGGGCR*PQTCRR
Trigger: CCTTCTGCATGTCTGAGGCCACCGGCAACCGCCGCC...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CAA 72 bp GGGCTGGGGACCGAGGCCAGTGCCTTCTTGGTACTCTaGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GLGTEASAFLVL*ARTGSAGSSSS
Trigger: TGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCTCGGTCCCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CAA 72 bp GAGTGGTGCCCTCCCCCAAACAGGCCCATCTCTCAGTaGTACTGTGAGCTTTTCCTAGGCCCACCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: EWCPPPNRPISQ*YCELFLGPPGS
Trigger: GCTTCCCGGTGGGCCTAGGAAAAGCTCACAGTACAACTGAGAGATGGGCCTGTTTGGGGGAGGGCACCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATTACTCCTGCGCAGTTTaGTGGATGGAGATCTCAACA +
Preference number: 4 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHYSCAV*WMEIST
Trigger: TGTTGAGATCTCCATCCATCAAACTGCGCAGGAGTA...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CACACACCGAGCGGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTTCCAGGCCCACACGTTaGCGATCATGTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: HTPSGCPRGDPTGMHQLCSRPTR*RSCHAG
Trigger: ACCAGCATGACATGATCGTCAACGTGTGGGCCTGGA...ACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGTCGGTTGCCTGCAGTaGCAAAGTAGCTGCAATCCT +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPVGCLQ*QSSCNP
Trigger: AGGATTGCAGCTACTTTGTCACTGCAGGCAACCGAC...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCGCTGTCCATTGGGGCTaGCACACACCGAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLAVHWG*HTPSGC
Trigger: GCATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGC...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCGGCAATGTAGATCCCTaGGGGGTCTGTCTGCACCTT +
Preference number: 4 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCGNVDP*GVCLHL
Trigger: AAGGTGCAGACAGACCCCTCAGGGATCTACATTGCC...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTTGGCTCTTCAAGGTCTaGGGAGATGCCATCCACACT +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPWLFKV*GDAIHT
Trigger: AGTGTGGATGGCATCTCCTCAGACCTTGAAGAGCCA...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGGAGCCCAGACCATCCTaGGCTTCGATCTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEEPRPS*ASISRD
Trigger: GTCTCGGGAGATCGAAGCTCAGGATGGTCTGGGCTC...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCAGGGCCAGCTTGCTaGGTGGTGAGACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGAGPAC*VVRLGW
Trigger: CCATCCGAGTCTCACCACTCAGCAAGCTGGCCCTGC...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCGCAGGGCCAGCTTGCTaGGTGGTGAGACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSAGPAC*VVRLGW
Trigger: CCATCCGAGTCTCACCACTCAGCAAGCTGGCCCTGC...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCAGGGCCAGCTTGCTaGGTGGTGAGACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: RNREEILRDSDLSGTCTGAGPAC*VVRLGW
Trigger: CCATCCGAGTCTCACCACTCAGCAAGCTGGCCCTGC...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CCATGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGGGGCCCGGCCTTTGGTaGCAGGAGAGAATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PWWGCHSAPGRQYHLQWVGPGLW*QERMQP
Trigger: TGGCTGCATTCTCTCCTGTCACCAAAGGCCGGGCCC...CACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGCTCACCGCTGGCTCTaGGTCCTGGCTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFAHRWL*VLAQGC
Trigger: GCAGCCCTGAGCCAGGACTCAGAGCCAGCGGTGAGC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGCCGACTTTGCTCTGCTaGGGGCATCTTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEPTLLC*GHLAAS
Trigger: GCTGGCTGCAAGATGCCCTCAGCAGAGCAAAGTCGG...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTAAGAGAAGGTGTCTCTaGGGAGCTGGGCAATCCGAC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPKRRCL*GAGQSD
Trigger: GTCGGATTGCCCAGCTCCTCAGAGACACCTTCTCTT...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTAGGCTGCTTTGCCTCTaGACACTGCTCCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPRLLCL*TLLPAF
Trigger: GAAAGCAGGGAGCAGTGTTCAGAGGCAAAGCAGCCT...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGCCCAGCACTGCCTTTaGGGAGGCTCCTTCTACCTA +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPAQHCL*GGSFYL
Trigger: TAGGTAGAAGGAGCCTCCTCAAAGGCAGTGCTGGGC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTGTGGTAAAGCTGCTCTaGCTTACCTGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPVVKLL*LTCSRG
Trigger: CCCTCTGCTGCAGGTAAGTCAGAGCAGCTTTACCAC...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACCACCTGGCTGTGCTCTaGCACGTCCCAAACCCGCAC +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHHLAVL*HVPNPH
Trigger: GTGCGGGTTTGGGACGTGGCAGAGCACAGCCAGGTG...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACTCGGCCACCTGGCTGTaGTCTGCCACGTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHSATWL*SATSQT
Trigger: GGTTTGGGACGTGGCAGAGCACAGCCAGGTGGCCGA...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CACACACCGAGCGGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCAGAGAAGGACACTaGTGTCACCCGACTGGACAC +
Preference number: 4 (lower is better)
Translates to: HTPSGCPRGDPTGMHQLCLREGH*CHPTGH
Trigger: GTGTCCAGTCGGGTGACAGCAGTGTCCTTCTCTGAG...ACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCGATGTGTCGGTTGCCTaGAGTGACAAAGTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: APGGLAPLPLGCSPDACGDVSVA*SDKVAA
Trigger: TGCAGCTACTTTGTCACTGCAGGCAACCGACACATC...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCACACACCGAGCGGATaGCCACGCGGGGATCCAACA +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDHTPSG*PRGDPT
Trigger: TGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTTCCCCTGATGCTAGATaGTGTCCATTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPSPDAR*CPLGLT
Trigger: TGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGA...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCCAGACTTCTGCGCAGTaGGGAAGTAGATGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVQTSAQ*GSRCSC
Trigger: ACAAGAGCATCTACTTCCGCACTGCGCAGAAGTCTG...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTGCTGCCAGACTTCTGCGCAGTaGGGAAGTAGATGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: PCSQSLQWGAPGWKGSCCQTSAQ*GSRCSC
Trigger: ACAAGAGCATCTACTTCCGCACTGCGCAGAAGTCTG...GCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCTGTGTCCGTGTGAACTaGACTCCATCTCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: APLPLGCSPDACGTWAGLCVRVN*TPSPDF
Trigger: GAAGTCTGGAGATGGAGTGCAGTTCACACGGACACA...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACAATGGTCCTTGCTGCTTaGCGCCCCGCTGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: MVISELRRHTNMQLSPDTMVLAA*RPADAG
Trigger: GCCAGCGTCAGCGGGGCGGCAAGCAGCAAGGACCAT...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGGGGACCGAGGCCAGTaGCTTCTTGGTACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSGDRGQ*LLGTLG
Trigger: GCCAAGAGTACCAAGAAGGCACTGGCCTCGGTCCCC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCCCCGGGCTGGAGCCTaGACTTGGAACTCACTGGTA +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSPRAGA*TWNSLV
Trigger: TACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGG...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGGAGTCTTCAGTGGGGTaGTCCGGGCTGGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEESSVG*SGLERQ
Trigger: CTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTC...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTCTGGAGTCTGGGGGCTaGCCTCCTGTAGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGLESGG*PPVAHR
Trigger: CCTATGGGCTACAGGAGGGCAGCCCCCAGACTCCAG...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGACTGCCCCTGGCTTGGTaGATTCCATGGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGLPLAW*IPWGWE
Trigger: CTCCCAACCCCATGGAATGCACCAAGCCAGGGGCAG...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTGTGGTAGAGCCGCACTaGCTGGCGCACGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCVVEPH*LAHAAA
Trigger: CGCGGCAGCGTGCGCCAGGCAGTGCGGCTCTACCAC...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGCTGCTGAGGGCATCTTaGAGCCAGCCACCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGELLRAS*SQPPSG
Trigger: ACCACTCGGTGGCTGGCTGCAAGATGCCCTCAGCAG...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCAGCAGGGCCTGTGTCTaGTCGGCTCCCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFSRACV*SAPTAP
Trigger: TGGGGCTGTGGGAGCCGAGCAGACACAGGCCCTGCT...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTCCAGAACTCAGAGTTTaGGTTCCATACGCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: LGPALGPLEQLHWPESQSPELRV*VPYAVP
Trigger: TGGAACGGCGTATGGAACGCAAACTCTGAGTTCTGG...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCCCAGAGTTCCCCGGGCTGGAGCCTGCACTTGGAACTCACTGGTATCCATGGTAGCGGCTGGGAAGGCTaGTTTGCCTCTGAACACTGC +
Preference number: 4 (lower is better)
Translates to: SQSSPGWSLHLELTGIHGSGWEG*FASEHC
Trigger: GCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGCCGCT...ACCATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGTTCACTTAGTGTACTaGACCCCTTTTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVVHLVY*TPFLLP
Trigger: AGGGAGCAGAAAAGGGGTGCAGTACACTAAGTGAAC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGAGTGGGGCGGCGGTTaGCGGTGGCCTCAGACATGC +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEEWGGG*RWPQTC
Trigger: GCATGTCTGAGGCCACCGGCAACCGCCGCCCCACTC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGTCTGTCCCCAGAGCATaGGGTCGGGGCAAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGESVPRA*GRGKVL
Trigger: TAGCACCTTGCCCCGACCCCATGCTCTGGGGACAGA...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTCAAGGCAATGGTGTCTaGATACCTGGCATTCGCCAC +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSQGNGV*IPGIRH
Trigger: GTGGCGAATGCCAGGTATCCAGACACCATTGCCTTG...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTCCTTGCCCACTTTCTTaGGGTCCCTCACATCCCAAA +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSPCPLS*GPSHPK
Trigger: TTTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAGG...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACGGGCCTGGTGCCGGTTaGGTCCAGAAGCCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GRVCTCNRNREEILRDSDGPGAG*VQKPFG
Trigger: CCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCC...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGCGACTCATCTCCCAGTaGGACAGGCTTCGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLRLISQ*DRLRGK
Trigger: TTTGCCCCGAAGCCTGTCCCACTGGGAGATGAGTCG...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGCTCAGTTCCACACCTaGCTGAACCCAGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGAQFHT*LNPAPS
Trigger: AGAGGGCGCTGGGTTCAGCCAGGTGTGGAACTGAGC...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGAGGGTCCTGCAGGCTTaGGGCCAGTGTTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGERVLQA*GQCFQL
Trigger: CAGCTGGAAACACTGGCCCCAAGCCTGCAGGACCCT...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCATGGCCAGCGAGTCCTaGCTAGGGTCCTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSMASES*LGSCRL
Trigger: AAGCCTGCAGGACCCTAGCCAGGACTCGCTGGCCAT...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCCTTCCTGGGACCAGATaGGATGATGGCCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPLPGTR*DDGQRV
Trigger: GACTCGCTGGCCATCATCCCATCTGGTCCCAGGAAG...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGGGGGCTTTTCATTCTaGCTAGTGAGTGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVGGFSF*LVSEVS
Trigger: TGAGACTTCACTCACTAGCCAGAATGAAAAGCCCCC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CACACACCGAGCGGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTTCTCAGAGTCTTCAGTaGGGTGCTCCGGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HTPSGCPRGDPTGMHQLCSQSLQ*GAPGWK
Trigger: TTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGA...ACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGATCTCAGAGTCTTCAGTaGGGTGCTCCGGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRSQSLQ*GAPGWK
Trigger: TTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGA...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTTTTAGAAACTGCTCCTaGTCTGGAGTCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPFRNCS*SGVWGL
Trigger: CAGCCCCCAGACTCCAGACCAGGAGCAGTTTCTAAA...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACTGCACTGGGGCCCCTaGAGCAGCTCCACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPELHWGP*SSSTGQ
Trigger: CTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGATGCCTGTGGCACCTaGGCTGGTCTCGACATCAGT +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPDACGT*AGLDIS
Trigger: ACTGATGTCGAGACCAGCCCAGGTGCCACAGGCATC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGTGCTCCAGGGGGATTaGCACCATTGCCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSVLQGD*HHCLSA
Trigger: AGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGCAC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCAGACTGTGCACAGACTaGGCCTTCTGGAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: MREPVQETALMGPGAGWVRLCTD*AFWSPE
Trigger: TTCTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCT...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGCGGACGGCCATCAGCTaGGGGCAGGGAGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLRTAIS*GQGAQT
Trigger: GGTCTGGGCTCCCTGCCCCCAGCTGATGGCCGTCCG...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGGGTCAGGCAGTGGTTTaGGGATGTCCAGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLGQAVV*GCPGPG
Trigger: ACCTGGTCCTGGACATCCCCAAACCACTGCCTGACC...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCGAAGAGGCTGCTGACTaGCAGTTGCTGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSEEAAD*QLLGTG
Trigger: CCCTGTGCCCAGCAACTGCCAGTCAGCAGCCTCTTC...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTGCTCAGGGCTGCCCCTaGCTTGGTGCATTCCATGGG +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGAQGCP*LGAFHG
Trigger: CCCATGGAATGCACCAAGCCAGGGGCAGCCCTGAGC...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGTCCTCAGCTCCACCCACTTGTCCAAAAGCCTTCGATCACTGAACTCGCACAGGCTCAGGGCTGCCCCTaGCTTGGTGCATTCCATGGG +
Preference number: 4 (lower is better)
Translates to: GPQLHPLVQKPSITELAQAQGCP*LGAFHG
Trigger: CCCATGGAATGCACCAAGCCAGGGGCAGCCCTGAGC...CTGTGCGAGTTCAGTGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR CCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGAGCATTCATTCACTTaGGACAGGCTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVEHSFT*DRLPEL
Trigger: GAGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGCAGTTTGGAATCGCTaGAGCATTCATTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVAVWNR*SIHSLG
Trigger: CCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTCCCACGAGGAGCGGCTaGGAAGGCTGCTTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGPTRSG*EGCFAS
Trigger: AGAGGCAAAGCAGCCTTCCCAGCCGCTCCTCGTGGG...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTCCCTGGAGGGCCAGATaGCTCTGCCTTTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGPWRAR*LCLSEL
Trigger: GAGCTCAGAAAGGCAGAGCCATCTGGCCCTCCAGGG...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGGAGAAGGTGGCCTCTaGGCTCCAGCAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEGEGGL*APAAGW
Trigger: CCAGCCGGCTGCTGGAGCCCAGAGGCCACCTTCTCC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAATGGGCGCGGCTGGTGTaGGAAGTCGGGGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEWARLV*EVGAQQ
Trigger: CTGCTGTGCCCCGACTTCCCACACCAGCCGCGCCCA...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCTGCGGTGGGCGCGGCTaGTGTGGGAAGTCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGCGGRG*CGKSGH
Trigger: GTGCCCCGACTTCCCACACCAGCCGCGCCCACCGCA...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGTGCGGTGGGCGCGGCTaGTGTGGGAAGTCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLCGGRG*CGKSGH
Trigger: GTGCCCCGACTTCCCACACCAGCCGCGCCCACCGCA...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGACAGCAGGAGCTATGGTaGCACGATCGGCTCAAAACG +
Preference number: 4 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRQQELW*HDRLKT
Trigger: CGTTTTGAGCCGATCGTGCCACCATAGCTCCTGCTG...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512970.5
CDS-3UTR CCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTTGGCTCAGATGCCTGTaGCACCTGGGCTGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSWLRCL*HLGWSR
Trigger: TCGAGACCAGCCCAGGTGCCACAGGCATCTGAGCCA...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514566.5
CDS-3UTR TCA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCAGAAGGCAAGGGCAGTaGTGGTTTTCCTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: MREPVQETALMGPGAGWVRRQGQ*WFSWNC
Trigger: ACAGTTCCAGGAAAACCATCACTGCCCTTGCCTTCT...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTGTCGGTTGCCTGCAGTaGCAAAGTAGCTGCAATCCT +
Preference number: 4 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGVGCLQ*QSSCNP
Trigger: AGGATTGCAGCTACTTTGTCACTGCAGGCAACCGAC...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCCACAGGCCACATCAGTaGATAGGTTGTTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: MREPVQETALMGPGAGWVHRPHQ*IGCSVA
Trigger: AGCTACGGAACAACCTATTCACTGATGTGGCCTGTG...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTCACAGGCCACATCAGTaGATAGGTTGTTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSHRPHQ*IGCSVA
Trigger: AGCTACGGAACAACCTATTCACTGATGTGGCCTGTG...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCAGACGCAGGAAGAATaGTACAGAGCCGAGTACACC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPQTQEE*YRAEYT
Trigger: GGTGTACTCGGCTCTGTATCATTCTTCCTGCGTCTG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCGCTGTCCATTGGGGCTaGCACACACCGAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: CNRNREEILRDSDLSGTCAVHWG*HTPSGC
Trigger: GCATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGC...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTATCTCACTCAGGGACTaGAGTTCGTGCACCCTAAGT +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPISLRD*SSCTLS
Trigger: ACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGAT...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp ATACGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGGGCCACGCACTCGCCTaGGGAGAAGTCAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: IRSPDARCCPLGLTHTERGHALA*GEVKNG
Trigger: TCCATTTTTGACTTCTCCTCAGGCGAGTGCGTGGCC...CCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CTTGCCCACTTTCTTGGGGTCCCTCACATCCCAAACATAAATGCTATGATCGTTTGCTTGCCGCCCCGCTaGCGCTGGCGCAACTCGGCC +
Preference number: 4 (lower is better)
Translates to: LAHFLGVPHIPNINAMIVCLPPR*RWRNSA
Trigger: GGCCGAGTTGCGCCAGCGTCAGCGGGGCGGCAAGCA...AACGATCATAGCATTTATGTTTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR TCA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACATGGGACCAGATGGGATaGTGGCCAGCGAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: MVISELRRHTNMQLSPDTWDQMG*WPASPG
Trigger: GCCAGGACTCGCTGGCCATCATCCCATCTGGTCCCA...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGAATTCTGGCTAGTGAGTaGAGTCTCAAGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRILASE*SLKGLL
Trigger: CAGGAGGCCCTTGAGACTTCACTCACTAGCCAGAAT...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTCAAGGTTGGGAAGCCTaGGGCCGAGGGGGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGQGWEA*GRGGFS
Trigger: TGAAAAGCCCCCTCGGCCTCAGGCTTCCCAACCTTG...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCGATACTCCGAGACTCTaGCCTCTCTGGGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPDTPRL*PLWDLH
Trigger: GTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATC...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGCTCTCAGTTGTACTGTaGGCTTTTCCTAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVLSVVL*AFPRPT
Trigger: GGTGGGCCTAGGAAAAGCTCACAGTACAACTGAGAG...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCCAGCTCCTGTCGCACTaGAGAGAAGGTGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPQLLSH*REGVSE
Trigger: CTCAGAGACACCTTCTCTTCAGTGCGACAGGAGCTG...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCATCGAAGCAACAGTTCTaGGTATTGCTCCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQASKQQF*VLLQQG
Trigger: GCCCTGCTGGAGCAATACTCAGAACTGTTGCTTCGA...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGATCGAAGCAACAGTTCTaGGTATTGCTCCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRSKQQF*VLLQQG
Trigger: GCCCTGCTGGAGCAATACTCAGAACTGTTGCTTCGA...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTCATGTTTGCCCAGGTaGGGGCTTACTGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLSCLPR*GLTVLQ
Trigger: CTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGGGGCTCTCGTGGCCTaGAGCTGTGGTAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGGALVA*SCGKAA
Trigger: AGCAGCTTTACCACAGCTTCAGGCCACGAGAGCCCC...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGTAGCTCCCTCCTCGTaGAGGACCTGGCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFVAPSS*RTWPRG
Trigger: CCCTCTGGGCCAGGTCCTTCACGAGGAGGGAGCTAC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTCTCTCGTCGGTTTCCTaGCTTACTCCTGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGLSSVS*LTPAQF
Trigger: AAACTGCGCAGGAGTAAGGCAGGAAACCGACGAGAG...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGCCATACTTGTGCTCCTaGAGCTCGGCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGPYLCS*SSATWL
Trigger: CAGCCAGGTGGCCGAGCTGCAGGAGCACAAGTATGG...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCCATACTTGTGCTCCTaGAGCTCGGCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDPYLCS*SSATWL
Trigger: CAGCCAGGTGGCCGAGCTGCAGGAGCACAAGTATGG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTGATGTGTCGGTTGCCTaGAGTGACAAAGTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSDVSVA*SDKVAA
Trigger: TGCAGCTACTTTGTCACTGCAGGCAACCGACACATC...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGCATCCCAAACATAAATaGTATGATCGTTGTACACAC +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGHPKHK*YDRCTH
Trigger: GTGTGTACAACGATCATAGCATTTATGTTTGGGATG...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGGAGCCGAGTACACCTTaGCCACTTTCTTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQEPSTP*PLSWGP
Trigger: GGGACCCCAAGAAAGTGGGCAAGGTGTACTCGGCTC...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR GCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTTCCCCTGATGCTAGATaGTGTCCATTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPSPDAR*CPLGLT
Trigger: TGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGA...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGTCCCCTGATGCTAGATaGTGTCCATTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVSPDAR*CPLGLT
Trigger: TGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGA...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTTGTTCGTCCAGCGTCTaGTGTAGGCTGTACTCCCGC +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGCSSSV*CRLYSR
Trigger: GCGGGAGTACAGCCTACAGCAGACGCTGGACGAACA...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp CACACACCGAGCGGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCAGTGCGGAAGTAGATaGTCTTGTCTGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: HTPSGCPRGDPTGMHQLCQCGSR*SCLLHS
Trigger: GCTGTGGAGCAGACAAGAGCATCTACTTCCGCACTG...ACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGTTAAACAGCTTCTTCTaGTTTCCACTGCTGATGTTA +
Preference number: 4 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGLNSFF*FPLLML
Trigger: TAACATCAGCAGTGGAAAGCAGAAGAAGCTGTTTAA...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGAACTCGGCCAGACGCTaGCTCATGCTGATGGTCATC +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLNSARR*LMLMVI
Trigger: GATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTT...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTGGCAAGGACGGGCAGTaGTGGAAGTTCTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGGKDGQ*WKFFFS
Trigger: ACTGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCC...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTGCTTTTCTGAGCTCCTaGTGCCTGGGTACACTCTTC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPAFLSS*CLGTLF
Trigger: GAAGAGTGTACCCAGGCAGCAGGAGCTCAGAAAAGC...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CACACACCGAGCGGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTGCTTTTCTGAGCTCCTaGTGCCTGGGTACACTCTTC +
Preference number: 4 (lower is better)
Translates to: HTPSGCPRGDPTGMHQLCAFLSS*CLGTLF
Trigger: GAAGAGTGTACCCAGGCAGCAGGAGCTCAGAAAAGC...ACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGCACTGTCAGGGCTGTaGTTTTCTGAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPALSGL*FSELLL
Trigger: CAGCAGGAGCTCAGAAAAGCACAGCCCTGACAGTGC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGTCCTCAGCTCCACCCACTTGTCCAAAAGCCTTCGATCACTGAACTCGCACAGGAGTCTTCAGTGGGGTaGTCCGGGCTGGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GPQLHPLVQKPSITELAQESSVG*SGLERQ
Trigger: CTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTC...CTGTGCGAGTTCAGTGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR GCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCGAGTCTTCAGTGGGGTaGTCCGGGCTGGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLESSVG*SGLERQ
Trigger: CTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTC...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCCCATAGGGGCCCATaGCTCCCTCCTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RNREEILRDSDLSGTCTGAHRGP*LPPLLP
Trigger: AGGAAGAAGAGGAGGGAGGCATGGGCCCCTATGGGC...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCCCCTGGGCGGGTCTGTACTTaGAACAGGAATCGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: REEILRDSDLSGTCTGAPGRVCT*NRNREE
Trigger: CTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC...AGGGGCCCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTCCATTGCCTCTCGGCTaGTCACCAGATGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSPLPLG*SPDACG
Trigger: GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGG...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTGGGGATTGGCACCATTaGCTCTCGGCTGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSGDWHH*LSAAHQ
Trigger: CTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCC...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGGGGATTGGCACCATTaGCTCTCGGCTGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGGDWHH*LSAAHQ
Trigger: CTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCC...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGTGTGGCACCAGACTGTaGACAGACTGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGECGTRL*TDWAFW
Trigger: CCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACA...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGCTGGGCACAGGGGCTaGTGGGCCCAGGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLAGHRG*WAQDEP
Trigger: AGGCTCATCCTGGGCCCAGCAGCCCCTGTGCCCAGC...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGGCTGCCGCGGAGCTCTaGCACCAGCTGCTCACACTG +
Preference number: 4 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWAAAEL*HQLLTL
Trigger: CAGTGTGAGCAGCTGGTGGCAGAGCTCCGCGGCAGC...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGCTGCCTGGCGCACGCTaGCGCGGAGCTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLLPGAR*RGALPP
Trigger: TGGTGGCAGAGCTCCGCGGCAGCGTGCGCCAGGCAG...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCTGCCTGGCGCACGCTaGCGCGGAGCTCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLLPGAR*RGALPP
Trigger: TGGTGGCAGAGCTCCGCGGCAGCGTGCGCCAGGCAG...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTCTGCTGAGGGCATCTTaGAGCCAGCCACCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGLLRAS*SQPPSG
Trigger: ACCACTCGGTGGCTGGCTGCAAGATGCCCTCAGCAG...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTTGGGCAATCCGACTTTaGTCTGCTGAGGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPWAIRL*SAEGIL
Trigger: CAAGATGCCCTCAGCAGAGCAAAGTCGGATTGCCCA...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCATGGGCAATCCGACTTTaGTCTGCTGAGGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQAWAIRL*SAEGIL
Trigger: CAAGATGCCCTCAGCAGAGCAAAGTCGGATTGCCCA...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGTGGGCAATCCGACTTTaGTCTGCTGAGGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMWAIRL*SAEGIL
Trigger: CAAGATGCCCTCAGCAGAGCAAAGTCGGATTGCCCA...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAAGCAGGGCCTGTGTCTaGTCGGCTCCCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPESRACV*SAPTAP
Trigger: TGGGGCTGTGGGAGCCGAGCAGACACAGGCCCTGCT...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTAGCAGGGCCTGTGTCTaGTCGGCTCCCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPSRACV*SAPTAP
Trigger: TGGGGCTGTGGGAGCCGAGCAGACACAGGCCCTGCT...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCCTGAACACTGCTCCCTaGTTTCCACTCCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPLNTAP*FPLQAA
Trigger: GGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAG...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGCTAGATGGGGCAGGCTaGCCTCCTACCTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGLDGAG*PPTSHS
Trigger: GCTGTGAGAGGTAGGAGGGCAGCCTGCCCCATCTAG...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACCTAGATGGGGCAGGCTaGCCTCCTACCTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHLDGAG*PPTSHS
Trigger: GCTGTGAGAGGTAGGAGGGCAGCCTGCCCCATCTAG...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCTGGGGAAAACCACCCTaGTCTGGCAGCCACGGGAGT +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLWGKPP*SGSHGS
Trigger: ACTCCCGTGGCTGCCAGAGCAGGGTGGTTTTCCCCA...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGCACAGGGAAATACAATaGTGGGCCCCTCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLHREIQ*WAPLGG
Trigger: CCCTCCAAGAGGGGCCCAGCATTGTATTTCCCTGTG...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCTCCCCGGCCCAGTCCTaGGTCTTGTCTCAACAGCGG +
Preference number: 4 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFSPAQS*VLSQQR
Trigger: CCGCTGTTGAGACAAGACCCAGGACTGGGCCGGGGA...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGGCGCAGTTTGATGGATaGAGATCTCAACAGATTCTT +
Preference number: 4 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMAQFDG*RSQQIL
Trigger: AAGAATCTGTTGAGATCTCCATCCATCAAACTGCGC...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTGAACTGTTGAGGATGTaGTGCTGTTTGTGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: LGPALGPLEQLHWPESQSELLRM*CCLCFR
Trigger: CCGGAAACACAAACAGCACCACATCCTCAACAGTTC...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCGAACTGTTGAGGATGTaGTGCTGTTTGTGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: APGGLAPLPLGCSPDACGELLRM*CCLCFR
Trigger: CCGGAAACACAAACAGCACCACATCCTCAACAGTTC...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAATGCAGCTCGGCCACCTaGCTGTGCTCTGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPECSSAT*LCSATS
Trigger: GGACGTGGCAGAGCACAGCCAGGTGGCCGAGCTGCA...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGTGCAGTGGGCCACTGTaGTCCTCAGCTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: RNREEILRDSDLSGTCTGCSGPL*SSAPPT
Trigger: AGTGGGTGGAGCTGAGGACCACAGTGGCCCACTGCA...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGCCTTGCCCACTTTCTTaGGGTCCCTCACATCCCAAA +
Preference number: 4 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVPCPLS*GPSHPK
Trigger: TTTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAGG...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR CCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACGGGGGCAGGCAGGCCTaGTTACTATCCTTCACCTCG +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHGGRQA*LLSFTS
Trigger: CGAGGTGAAGGATAGTAACCAGGCCTGCCTGCCCCC...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCGGGGGCAGGCAGGCCTaGTTACTATCCTTCACCTCG +
Preference number: 4 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSGGRQA*LLSFTS
Trigger: CGAGGTGAAGGATAGTAACCAGGCCTGCCTGCCCCC...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512970.5
CDS-3UTR CCA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGCCGTGTACTTCCAGCTaGGCTCCACATCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGPCTSS*APHPCH
Trigger: ATGACATGGATGTGGAGCCCAGCTGGAAGTACACGG...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCTCTTGTCAGAACAGCTaGTGGCAATGTAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: APGGLAPLPLGCSPDACGSCQNS*WQCRSL
Trigger: CAGGGATCTACATTGCCACCAGCTGTTCTGACAAGA...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGAGTGGCCAAACATGGTaGCCACGCACTCGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RNREEILRDSDLSGTCTGSGQTW*PRTRLR
Trigger: CCTCAGGCGAGTGCGTGGCCACCATGTTTGGCCACT...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGCCTTTGGGGAGAGGATaGTCCTTGCTGCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGPLGRG*SLLLAA
Trigger: GGCGGCAAGCAGCAAGGACCATCCTCTCCCCAAAGG...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCCTTTGGGGAGAGGATaGTCCTTGCTGCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDPLGRG*SLLLAA
Trigger: GGCGGCAAGCAGCAAGGACCATCCTCTCCCCAAAGG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGGGTCCAGAAGCCCTTTaGGGAGAGGATGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEGPEAL*GEDGPC
Trigger: GCAAGGACCATCCTCTCCCCAAAGGGCTTCTGGACC...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGGGCCTGGTGCCGGTTaGGTCCAGAAGCCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEGPGAG*VQKPFG
Trigger: CCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGAAGCATTGATGGGGCCTaGTGCCGGTTGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGSIDGA*CRLGPE
Trigger: TTCTGGACCCAACCGGCACCAGGCCCCATCAATGCT...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGAAGGACGGGCAGTGCTaGAAGTTCTTCTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVKDGQC*KFFFSP
Trigger: GGGACTGAAGAAGAACTTCCAGCACTGCCCGTCCTT...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGAGGCCAGTGCCTTCTTaGTACTCTTGGCAAGGACGG +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLRPVPS*YSWQGR
Trigger: CCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCT...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGGGGCAAAGCTGGGCTaGGGACCGAGGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSGAKLG*GPRPVP
Trigger: AGGCACTGGCCTCGGTCCCCAGCCCAGCTTTGCCCC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGCTTCGGGGCAAAGCTaGGCTGGGGACCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLASGQS*AGDRGQ
Trigger: CTGGCCTCGGTCCCCAGCCCAGCTTTGCCCCGAAGC...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTCGACTCATCTCCCAGTaGGACAGGCTTCGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGRLISQ*DRLRGK
Trigger: TTTGCCCCGAAGCCTGTCCCACTGGGAGATGAGTCG...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGATCTTCTTCTGGGTCCTaGGTTGGCTGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGSSSGS*VGCRSW
Trigger: CCAGCTCCTGCAGCCAACCCAGGACCCAGAAGAAGA...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGTCTTCTTCTGGGTCCTaGGTTGGCTGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGESSSGS*VGCRSW
Trigger: CCAGCTCCTGCAGCCAACCCAGGACCCAGAAGAAGA...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCTCAGTTCCACACCTaGCTGAACCCAGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RNREEILRDSDLSGTCTGAQFHT*LNPAPS
Trigger: AGAGGGCGCTGGGTTCAGCCAGGTGTGGAACTGAGC...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCATGGCCAGCGAGTCCTaGCTAGGGTCCTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLMASES*LGSCRL
Trigger: AAGCCTGCAGGACCCTAGCCAGGACTCGCTGGCCAT...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTGCAGGTTCCAGATCTTaGGCAAAGACCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPAGSRS*AKTPSS
Trigger: AGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGCAGAGTTCCCCGGGCTaGAGCCTGCACTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGQSSPG*SLHLEL
Trigger: GAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTG...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCTTTAGAAACTGCTCCTaGTCTGGAGTCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCFRNCS*SGVWGL
Trigger: CAGCCCCCAGACTCCAGACCAGGAGCAGTTTCTAAA...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCGTTGAGACGGCATCGTaGCAACAGCACAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPVETAS*QQHRGC
Trigger: GCAGCCTCTGTGCTGTTGCCACGATGCCGTCTCAAC...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCAGACTGTGCACAGACTaGGCCTTCTGGAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCRLCTD*AFWSPE
Trigger: TTCTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCT...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGTCTTGGCCATGGAACTaGTGGTGGGGTTCTGATAGG +
Preference number: 4 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGSWPWN*WWGSDR
Trigger: CCTATCAGAACCCCACCACCAGTTCCATGGCCAAGA...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGGGGATATCTTGGCCATaGAACTGGTGGTGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVGISWP*NWWWGS
Trigger: AGAACCCCACCACCAGTTCCATGGCCAAGATATCCC...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGGGGATATCTTGGCCATaGAACTGGTGGTGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGGISWP*NWWWGS
Trigger: AGAACCCCACCACCAGTTCCATGGCCAAGATATCCC...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGGTGGTGAGACTCGGATaGGGGCATGAGCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLVVRLG*GHELEV
Trigger: AACCTCAAGCTCATGCCCCCATCCGAGTCTCACCAC...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGAGGACGGTCAGGCAGTaGTTTGGGGATGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGERTVRQ*FGDVQD
Trigger: GTCCTGGACATCCCCAAACCACTGCCTGACCGTCCT...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTGCTGCGCAGTTTGGAATCGCTaGAGCATTCATTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: PCSQSLQWGAPGWKGSCCAVWNR*SIHSLG
Trigger: CCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGC...GCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCCCACGGGAGTGCAGCTaGTGTGAGAGGGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLPRECS*CERGSA
Trigger: TGCACTTCCCCTCTCACACCAGCTGCACTCCCGTGG...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCCTCTTGGAGGGAGAATaGGAGTGGAATGTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPLLEGE*EWNVRA
Trigger: AGCCCGCACATTCCACTCCCATTCTCCCTCCAAGAG...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTCTTTGTCACCTAGGTTaGAGTGCAATGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSLCHLG*SAMARS
Trigger: AGATCGCGCCATTGCACTCCAACCTAGGTGACAAAG...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCAGGCGGGGGCAAATCTaGAGTGGGGCGGCGGTTGCC +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSRRGQI*SGAAVA
Trigger: GGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCT...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCTTCCACAGCCATTATaGCGAGAAACCCTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPLPQPL*RETLWD
Trigger: GTCCCAAAGGGTTTCTCGTCATAATGGCTGTGGAAG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGCCGGCTGGTAATGGTTaGCCCTTCCACAGCCATTAT +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLPAGNG*PFHSHY
Trigger: ATAATGGCTGTGGAAGGGTCAACCATTACCAGCCGG...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCCCAGAGTTCCCCGGGCTGGAGCCTGCACTTGGAACTCACTGGTATCCATGGTCCGGCTGGTAATGGTTaGCCCTTCCACAGCCATTAT +
Preference number: 4 (lower is better)
Translates to: SQSSPGWSLHLELTGIHGPAGNG*PFHSHY
Trigger: ATAATGGCTGTGGAAGGGTCAACCATTACCAGCCGG...ACCATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACAGGTCACCTTGGAGCTaGGGTCCTCTCGTCGGTTTC +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDRSPWS*GPLVGF
Trigger: GAAACCGACGAGAGGACCTCAGCTCCAAGGTGACCT...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTAGAAGGCAAGGGCAGTaGTGGTTTTCCTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPRRQGQ*WFSWNC
Trigger: ACAGTTCCAGGAAAACCATCACTGCCCTTGCCTTCT...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGCCCACTCTCTCCAGTaGCCAAGTACTTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSAHSLQ*PSTCHQ
Trigger: CTGATGGCAAGTACTTGGTCACTGGAGAGAGTGGGC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGTCCAGGCCCACACGTTaGCGATCATGTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQSRPTR*RSCHAG
Trigger: ACCAGCATGACATGATCGTCAACGTGTGGGCCTGGA...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCAGTGGCATTCACCTTTaGGGTCTTGCTGTCATCGAG +
Preference number: 4 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCSGIHL*GLAVIE
Trigger: CTCGATGACAGCAAGACCTCAAAGGTGAATGCCACT...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CACACACCGAGCGGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCACAGGCCACATCAGTaGATAGGTTGTTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: HTPSGCPRGDPTGMHQLCHRPHQ*IGCSVA
Trigger: AGCTACGGAACAACCTATTCACTGATGTGGCCTGTG...ACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACGCAGCCCTGAGGACGTaGTGCAGAAGGTACTGTCCG +
Preference number: 4 (lower is better)
Translates to: GRVCTCNRNREEILRDSDAALRT*CRRYCP
Trigger: CGGACAGTACCTTCTGCATCACGTCCTCAGGGCTGC...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTAAAGCCTTCGATCACTaGACTCGCACAGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGKAFDH*TRTAAL
Trigger: CAGGGCTGCTGTGCGAGTTCAGTGATCGAAGGCTTT...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTGCGGATGGTGTTGTCTaGGGAGCAGGTAATAAAGGA +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPADGVV*GAGNKG
Trigger: TCCTTTATTACCTGCTCCTCAGACAACACCATCCGC...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCCCCTGCGGATGGTGTTGTCTaGGGAGCAGGTAATAAAGGA +
Preference number: 4 (lower is better)
Translates to: REEILRDSDLSGTCTGAPADGVV*GAGNKG
Trigger: TCCTTTATTACCTGCTCCTCAGACAACACCATCCGC...AGGGGCCCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512970.5
CDS-3UTR TCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGGCAATGTAGATCCCTaGGGGGTCTGTCTGCACCTT +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSGNVDP*GVCLHL
Trigger: AAGGTGCAGACAGACCCCTCAGGGATCTACATTGCC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCATTCTGGCTAGTGAGTaGAGTCTCAAGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPILASE*SLKGLL
Trigger: CAGGAGGCCCTTGAGACTTCACTCACTAGCCAGAAT...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACGATACTCCGAGACTCTaGCCTCTCTGGGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHDTPRL*PLWDLH
Trigger: GTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATC...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCAGCAGTGCGCCTGGTaGAGGGGCCTGCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLQQCAW*RGLQTG
Trigger: GCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTG...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCAAGAGAAGGTGTCTCTaGGGAGCTGGGCAATCCGAC +
Preference number: 4 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPKRRCL*GAGQSD
Trigger: GTCGGATTGCCCAGCTCCTCAGAGACACCTTCTCTT...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTCAGCTCCTGTCGCACTaGAGAGAAGGTGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSQLLSH*REGVSE
Trigger: CTCAGAGACACCTTCTCTTCAGTGCGACAGGAGCTG...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTCGAAGCAACAGTTCTaGGTATTGCTCCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLSKQQF*VLLQQG
Trigger: GCCCTGCTGGAGCAATACTCAGAACTGTTGCTTCGA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAGGCTGCTTTGCCTCTaGACACTGCTCCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSRLLCL*TLLPAF
Trigger: GAAAGCAGGGAGCAGTGTTCAGAGGCAAAGCAGCCT...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTGGAGTTCCAAGGAAGTaGGGCAACAGTCAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPGVPRK*GNSQGN
Trigger: ATTTCCCTGACTGTTGCCTCACTTCCTTGGAACTCC...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCTCACAGCACCAAGATaGCAAAGACCCAAGACCTGT +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPLTAPR*QRPKTC
Trigger: ACAGGTCTTGGGTCTTTGTCATCTTGGTGCTGTGAG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCTTGGCTGACGGGCACTaGATACCACATCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPLADGH*IPHHLS
Trigger: TGAGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAA...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTAGGCCCACAGTTGGCTaGCGGGCACTGAATACCACA +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSRPTVG*RALNTT
Trigger: TGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCT...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTGATCTCATCTGTGGCTaGGGTCCTCAGGAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGDLICG*GPQEVG
Trigger: GCCTACCTCCTGAGGACCTCAGCCACAGATGAGATC...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACGCACGTGCATGCGTGTaGTCTCATCTGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDARACV*SHLWLR
Trigger: CCTCAGCCACAGATGAGATCACACGCATGCACGTGC...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTGCCCAGCACTGCCTTTaGGGAGGCTCCTTCTACCTA +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSAQHCL*GGSFYL
Trigger: TAGGTAGAAGGAGCCTCCTCAAAGGCAGTGCTGGGC...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTCCCAGAGGGCGAACCTaGGTCCCACCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLPRGRT*VPPAVG
Trigger: GCCCACCGCAGGTGGGACTCAGGTTCGCCCTCTGGG...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGCTCTCGTCGGTTTCCTaGCTTACTCCTGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLLSSVS*LTPAQF
Trigger: AAACTGCGCAGGAGTAAGGCAGGAAACCGACGAGAG...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATCGCACGGCAGGCATGTaGCCACTCTCTCCAGTGACC +
Preference number: 4 (lower is better)
Translates to: LPLLHHPQLALQGLRRCHRTAGM*PLSPVT
Trigger: GGTCACTGGAGAGAGTGGGCACATGCCTGCCGTGCG...ATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTCACCTGGCTGTGCTCTaGCACGTCCCAAACCCGCAC +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPHLAVL*HVPNPH
Trigger: GTGCGGGTTTGGGACGTGGCAGAGCACAGCCAGGTG...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCGGCCACCTGGCTGTaGTCTGCCACGTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWSATWL*SATSQT
Trigger: GGTTTGGGACGTGGCAGAGCACAGCCAGGTGGCCGA...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCCCATACTTGTGCTCCTaGAGCTCGGCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFPYLCS*SSATWL
Trigger: CAGCCAGGTGGCCGAGCTGCAGGAGCACAAGTATGG...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCTCAGAGAAGGACACTaGTGTCACCCGACTGGACAC +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSLREGH*CHPTGH
Trigger: GTGTCCAGTCGGGTGACAGCAGTGTCCTTCTCTGAG...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCTCACCTTTGAGGTCTTaGTGTCATCGAGATACCAGA +
Preference number: 4 (lower is better)
Translates to: APGGLAPLPLGCSPDACGSPLRS*CHRDTR
Trigger: TCTGGTATCTCGATGACAGCAAGACCTCAAAGGTGA...GCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGCTTGGCTCACAGAGATaGAGTGGGCCACTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGLGSQR*SGPLWS
Trigger: GGACCACAGTGGCCCACTGCATCTCTGTGAGCCAAG...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTGAGCCGAGTACACCTTaGCCACTTTCTTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSEPSTP*PLSWGP
Trigger: GGGACCCCAAGAAAGTGGGCAAGGTGTACTCGGCTC...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCCTGATCATGCGGACTTaGCCATCACTGGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPLIMRT*PSLAAN
Trigger: GTTTGCAGCCAGTGATGGGCAAGTCCGCATGATCAG...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGAACTCGGCCAGACGCTaGCTCATGCTGATGGTCATC +
Preference number: 4 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQNSARR*LMLMVI
Trigger: GATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTT...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCATGGTCCTTGCTGCTTaGCGCCCCGCTGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGMVLAA*RPADAG
Trigger: GCCAGCGTCAGCGGGGCGGCAAGCAGCAAGGACCAT...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGGCAAGGACGGGCAGTaGTGGAAGTTCTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPGKDGQ*WKFFFS
Trigger: ACTGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCGGGGACCGAGGCCAGTaGCTTCTTGGTACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFGDRGQ*LLGTLG
Trigger: GCCAAGAGTACCAAGAAGGCACTGGCCTCGGTCCCC...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGAGCCAGTGTTTCCAGCTaGCGCAGATCCAGCATGGAT +
Preference number: 4 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGASVSS*RRSSMD
Trigger: ATCCATGCTGGATCTGCGGCAGCTGGAAACACTGGC...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAAGGGCCTCCTGCCCATaGTTCCTGGGACCAGATGGG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPERASCP*FLGPDG
Trigger: CCCATCTGGTCCCAGGAAGCATGGGCAGGAGGCCCT...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCTTTCTGAGCTCCTGCTaGCTGGGTACACTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPFLSSC*LGTLFP
Trigger: TGGGAAGAGTGTACCCAGGCAGCAGGAGCTCAGAAA...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGGCTTTTCTGAGCTCCTaGTGCCTGGGTACACTCTTC +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLAFLSS*CLGTLF
Trigger: GAAGAGTGTACCCAGGCAGCAGGAGCTCAGAAAAGC...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTGGAAAGGCAGCTGCTaGTGTAATCCACAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLWKGSC*CNPQSR
Trigger: CCTGCTCTGTGGATTACAGCAGCAGCTGCCTTTCCA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACTGGAGTCTGGGGGCTaGCCTCCTGTAGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPELESGG*PPVAHR
Trigger: CCTATGGGCTACAGGAGGGCAGCCCCCAGACTCCAG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACAGGGGATTGGCACCATTaGCTCTCGGCTGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: MVISELRRHTNMQLSPDTGDWHH*LSAAHQ
Trigger: CTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCC...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp ATACGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGCCCCAACAGAGATACTaGGGGATATCTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: IRSPDARCCPLGLTHTERPQQRY*GISWPW
Trigger: CCATGGCCAAGATATCCCGCAGTATCTCTGTTGGGG...CCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGAAGCCAGGCTTTTCTaGCTCGCCAGGGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLEARLF*LARGPA
Trigger: GGCCGGGCCCCTGGCGAGGCAGAAAAGCCTGGCTTC...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCCTGCTGAGGGCATCTTaGAGCCAGCCACCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFLLRAS*SQPPSG
Trigger: ACCACTCGGTGGCTGGCTGCAAGATGCCCTCAGCAG...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGAAACAGTTCTGAGTATTaGTCCAGCAGGGCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRNSSEY*SSRACV
Trigger: GACACAGGCCCTGCTGGAGCAATACTCAGAACTGTT...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGAACAGTTCTGAGTATTaGTCCAGCAGGGCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGNSSEY*SSRACV
Trigger: GACACAGGCCCTGCTGGAGCAATACTCAGAACTGTT...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTCTGAACACTGCTCCCTaGTTTCCACTCCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSLNTAP*FPLQAA
Trigger: GGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAG...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGACTGAACACTGCTCCCTaGTTTCCACTCCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGLNTAP*FPLQAA
Trigger: GGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAG...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGAGCGGCTGGGAAGGCTaGTTTGCCTCTGAACACTGC +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGSGWEG*FASEHC
Trigger: GCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGCCGCT...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTAGCGGCTGGGAAGGCTaGTTTGCCTCTGAACACTGC +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSSGWEG*FASEHC
Trigger: GCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGCCGCT...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGCACAGGGAAATACAATaGTGGGCCCCTCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEHREIQ*WAPLGG
Trigger: CCCTCCAAGAGGGGCCCAGCATTGTATTTCCCTGTG...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTCAGCACACCCGTGGGTaGCCAGCACTGCCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPQHTRG*PALPLR
Trigger: CCTCAAAGGCAGTGCTGGGCACCCACGGGTGTGCTG...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAATCCCCGGCCCAGTCCTaGGTCTTGTCTCAACAGCGG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPESPAQS*VLSQQR
Trigger: CCGCTGTTGAGACAAGACCCAGGACTGGGCCGGGGA...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCGACTGGACACCTTGTTaGAGGCCACCACAATGTTTT +
Preference number: 4 (lower is better)
Translates to: MREPVQETALMGPGAGWVDWTPC*RPPQCF
Trigger: AAAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTC...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGCTGCTGTCACCCGACTaGACACCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGLLSPD*TPCWRP
Trigger: TGGCCTCCAACAAGGTGTCCAGTCGGGTGACAGCAG...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCTGCTGTCACCCGACTaGACACCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDLLSPD*TPCWRP
Trigger: TGGCCTCCAACAAGGTGTCCAGTCGGGTGACAGCAG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGCTGCTGTCACCCGACTaGACACCTTGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RNREEILRDSDLSGTCTGLLSPD*TPCWRP
Trigger: TGGCCTCCAACAAGGTGTCCAGTCGGGTGACAGCAG...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGAGAATCTCAGAGTCATaGGCCTCCACCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: RSPDARCCPLGLTHTERMRISES*ASTFSI
Trigger: GATGCTGAAGGTGGAGGCCCATGACTCTGAGATTCT...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGTCCTCAGCTCCACCCACTTGTCCAAAAGCCTTCGATCACTGAACTCGCACAGGTCTTCCGCACCACGTaGTGTGTCCGTGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: GPQLHPLVQKPSITELAQVFRTT*CVRVNC
Trigger: GCAGTTCACACGGACACACCACGTGGTGCGGAAGAC...CTGTGCGAGTTCAGTGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR CCA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCATGTCAGAACAGCTGGTaGCAATGTAGATCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQACQNSW*QCRSLR
Trigger: CCTCAGGGATCTACATTGCCACCAGCTGTTCTGACA...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCTGTCAGAACAGCTGGTaGCAATGTAGATCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCCQNSW*QCRSLR
Trigger: CCTCAGGGATCTACATTGCCACCAGCTGTTCTGACA...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTTGTCAGAACAGCTGGTaGCAATGTAGATCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPCQNSW*QCRSLR
Trigger: CCTCAGGGATCTACATTGCCACCAGCTGTTCTGACA...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTTCTTGTCAGAACAGCTaGTGGCAATGTAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSSCQNS*WQCRSL
Trigger: CAGGGATCTACATTGCCACCAGCTGTTCTGACAAGA...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGGTGACAATCTCTGAGTaGCCAAACATGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLVTISE*PNMVAT
Trigger: CGTGGCCACCATGTTTGGCCACTCAGAGATTGTCAC...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCCCAGAGTTCCCCGGGCTGGAGCCTGCACTTGGAACTCACTGGTATCCATGGTGTGACAATCTCTGAGTaGCCAAACATGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: SQSSPGWSLHLELTGIHGVTISE*PNMVAT
Trigger: CGTGGCCACCATGTTTGGCCACTCAGAGATTGTCAC...ACCATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCGGTCCAGAAGCCCTTTaGGGAGAGGATGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLGPEAL*GEDGPC
Trigger: GCAAGGACCATCCTCTCCCCAAAGGGCTTCTGGACC...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGGTCCAGAAGCCCTTTaGGGAGAGGATGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RNREEILRDSDLSGTCTGGPEAL*GEDGPC
Trigger: GCAAGGACCATCCTCTCCCCAAAGGGCTTCTGGACC...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGAGGCCAGTGCCTTCTTaGTACTCTTGGCAAGGACGG +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGERPVPS*YSWQGR
Trigger: CCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCT...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGTTGGCTGCAGGAGCTaGGTCCAGGAACCCCACGGA +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEVGCRS*VQEPHG
Trigger: TCCGTGGGGTTCCTGGACCCAGCTCCTGCAGCCAAC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCCTTCCTGGGACCAGATaGGATGATGGCCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSLPGTR*DDGQRV
Trigger: GACTCGCTGGCCATCATCCCATCTGGTCCCAGGAAG...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCACTGGTATCCATGGTaGGGTTGTCACTCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDHWYPW*GCHSAP
Trigger: CGGAGCCGAGTGACAACCCCACCATGGATACCAGTG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTCACTGGTATCCATGGTaGGGTTGTCACTCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGHWYPW*GCHSAP
Trigger: CGGAGCCGAGTGACAACCCCACCATGGATACCAGTG...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGGCTGGAGCCTGCACTTaGAACTCACTGGTATCCATG +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLAGACT*NSLVSM
Trigger: CATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGC...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTTCTCAGAGTCTTCAGTaGGGTGCTCCGGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSSQSLQ*GAPGWK
Trigger: TTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGA...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCTCTCAGAGTCTTCAGTaGGGTGCTCCGGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSSQSLQ*GAPGWK
Trigger: TTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGA...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATACTGCACTGGGGCCCCTaGAGCAGCTCCACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRILHWGP*SSSTGQ
Trigger: CTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAG...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTGTTGAGACGGCATCGTaGCAACAGCACAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSVETAS*QQHRGC
Trigger: GCAGCCTCTGTGCTGTTGCCACGATGCCGTCTCAAC...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCGTCCAGAAAAGGGGCTaGCTGTGGCCACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLVQKRG*LWPLSW
Trigger: CCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGAC...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGCTCATGTCTTTCCTGTaGCACCAGACTGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGLMSFL*HQTVHR
Trigger: TCTGTGCACAGTCTGGTGCCACAGGAAAGACATGAG...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTGGGCACAGGGGCTGCTaGGCCCAGGATGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLGHRGC*AQDEPG
Trigger: GCCAGGCTCATCCTGGGCCCAGCAGCCCCTGTGCCC...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCCTGACTGGCAGTTGCTaGGCACAGGGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGLTGSC*AQGLLG
Trigger: GCCCAGCAGCCCCTGTGCCCAGCAACTGCCAGTCAG...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTAGAGGGGCTGCAGTTTaGAATCGCTGGAGCATTCAT +
Preference number: 4 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGRGAAV*NRWSIH
Trigger: ATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCT...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGTCCCAGATTCCTAGATaGGGCAGGCTGCCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGSQIPR*GRLPSY
Trigger: GTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGA...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGTGAAGGCCCACAGTTaGCTGACGGGCACTGAATAC +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGVKAHS*LTGTEY
Trigger: GTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCAC...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACGAGGGAGAATGGGAGTaGAATGTGCGGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDEGEWE*NVRAQV
Trigger: GACCTGAGCCCGCACATTCCACTCCCATTCTCCCTC...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGCAACATCCCACAGCTaGCTCAAGTTCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGATSHS*LKFWPG
Trigger: TCCTGGCCAGAACTTGAGCCAGCTGTGGGATGTTGC...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGAACCTCCCGAGTAGCTaGGATTACAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGNLPSS*DYRRPP
Trigger: TGGTGGGCGCCTGTAATCCCAGCTACTCGGGAGGTT...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCAACCTCCCGAGTAGCTaGGATTACAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLNLPSS*DYRRPP
Trigger: TGGTGGGCGCCTGTAATCCCAGCTACTCGGGAGGTT...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGCTGATGCCCCGGAGCTaGGAACCTTTTGTAACCCTT +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLLMPRS*EPFVTL
Trigger: AAGGGTTACAAAAGGTTCCCAGCTCCGGGGCATCAG...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACAAGGTCACCTTGGAGCTaGGGTCCTCTCGTCGGTTTC +
Preference number: 4 (lower is better)
Translates to: MVISELRRHTNMQLSPDTRSPWS*GPLVGF
Trigger: GAAACCGACGAGAGGACCTCAGCTCCAAGGTGACCT...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512970.5
CDS-3UTR TCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCTGTGTTTCCGGGGATTaGACAACACAACCACACACC +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPCVSGD*TTQPHT
Trigger: GGTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACA...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTGTGTTTCCGGGGATTaGACAACACAACCACACACC +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLCVSGD*TTQPHT
Trigger: GGTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACGCCCACTCTCTCCAGTaGCCAAGTACTTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDAHSLQ*PSTCHQ
Trigger: CTGATGGCAAGTACTTGGTCACTGGAGAGAGTGGGC...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTTCCAGGCCCACACGTTaGCGATCATGTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGSRPTR*RSCHAG
Trigger: ACCAGCATGACATGATCGTCAACGTGTGGGCCTGGA...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGTCGGTTGCCTGCAGTaGCAAAGTAGCTGCAATCCT +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGVGCLQ*QSSCNP
Trigger: AGGATTGCAGCTACTTTGTCACTGCAGGCAACCGAC...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp ATACGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGCGAGATACCAGAATTTaGTGTGTCGGTTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: IRSPDARCCPLGLTHTERRDTRI*CVGCLQ
Trigger: CTGCAGGCAACCGACACATCAAATTCTGGTATCTCG...CCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGAGTGGCATTCACCTTTaGGGTCTTGCTGTCATCGAG +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLSGIHL*GLAVIE
Trigger: CTCGATGACAGCAAGACCTCAAAGGTGAATGCCACT...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGAAAGCCTTCGATCACTaGACTCGCACAGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGKAFDH*TRTAAL
Trigger: CAGGGCTGCTGTGCGAGTTCAGTGATCGAAGGCTTT...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCAGACGCAGGAAGAATaGTACAGAGCCGAGTACACC +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSQTQEE*YRAEYT
Trigger: GGTGTACTCGGCTCTGTATCATTCTTCCTGCGTCTG...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTCAGACGCAGGAAGAATaGTACAGAGCCGAGTACACC +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGQTQEE*YRAEYT
Trigger: GGTGTACTCGGCTCTGTATCATTCTTCCTGCGTCTG...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGCGGATGGTGTTGTCTaGGGAGCAGGTAATAAAGGA +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPADGVV*GAGNKG
Trigger: TCCTTTATTACCTGCTCCTCAGACAACACCATCCGC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCGCTGTCCATTGGGGCTaGCACACACCGAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSAVHWG*HTPSGC
Trigger: GCATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGC...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGGCCGTCCTCACCCTGTaGCCCTTTAAACAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQAVLTL*PFKQLL
Trigger: AAGAAGCTGTTTAAAGGGTCACAGGGTGAGGACGGC...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTGGCAATGTAGATCCCTaGGGGGTCTGTCTGCACCTT +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGGNVDP*GVCLHL
Trigger: AAGGTGCAGACAGACCCCTCAGGGATCTACATTGCC...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGGCCACGCACTCGCCTaGGGAGAAGTCAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGGHALA*GEVKNG
Trigger: TCCATTTTTGACTTCTCCTCAGGCGAGTGCGTGGCC...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTGGCCACGCACTCGCCTaGGGAGAAGTCAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGGHALA*GEVKNG
Trigger: TCCATTTTTGACTTCTCCTCAGGCGAGTGCGTGGCC...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCGACGCTGCCTCATGCTaGTGGTCATCTCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLDAASC*WSSQSS
Trigger: TGAGCTCTGAGATGACCATCAGCATGAGGCAGCGTC...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCGACGCTGCCTCATGCTaGTGGTCATCTCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSDAASC*WSSQSS
Trigger: TGAGCTCTGAGATGACCATCAGCATGAGGCAGCGTC...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCAGGAGACAGCATTaGTGGGGCCTGGTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWSRRQH*WGLVPV
Trigger: AACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGA...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATTCCAGGAGACAGCATTaGTGGGGCCTGGTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDSRRQH*WGLVPV
Trigger: AACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGA...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACAGTTCCACACCTGGCTaGACCCAGCGCCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GRVCTCNRNREEILRDSDSSTPG*TQRPLL
Trigger: AAGAAGAGGGCGCTGGGTTCAGCCAGGTGTGGAACT...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTATTCTGGCTAGTGAGTaGAGTCTCAAGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSILASE*SLKGLL
Trigger: CAGGAGGCCCTTGAGACTTCACTCACTAGCCAGAAT...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACAAGGTTGGGAAGCCTaGGGCCGAGGGGGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEQGWEA*GRGGFS
Trigger: TGAAAAGCCCCCTCGGCCTCAGGCTTCCCAACCTTG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR TCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCGCAGGGCCAGCTTGCTaGGTGGTGAGACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGAGPAC*VVRLGW
Trigger: CCATCCGAGTCTCACCACTCAGCAAGCTGGCCCTGC...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCGGGCCCGGCCTTTGGTaGCAGGAGAGAATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSGPGLW*QERMQP
Trigger: TGGCTGCATTCTCTCCTGTCACCAAAGGCCGGGCCC...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTCTCTCAGTTGTACTGTaGGCTTTTCCTAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGLSVVL*AFPRPT
Trigger: GGTGGGCCTAGGAAAAGCTCACAGTACAACTGAGAG...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCCTTGGAAGAGGCTGCTaGCTGGCAGTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFLGRGC*LAVAGH
Trigger: GTGCCCAGCAACTGCCAGTCAGCAGCCTCTTCCAAG...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATCTTGGAAGAGGCTGCTaGCTGGCAGTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDLGRGC*LAVAGH
Trigger: GTGCCCAGCAACTGCCAGTCAGCAGCCTCTTCCAAG...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGAAGAGAAGGTGTCTCTaGGGAGCTGGGCAATCCGAC +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGKRRCL*GAGQSD
Trigger: GTCGGATTGCCCAGCTCCTCAGAGACACCTTCTCTT...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACTCATGTTTGCCCAGGTaGGGGCTTACTGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHSCLPR*GLTVLQ
Trigger: CTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGA...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACGTGGTAAAGCTGCTCTaGCTTACCTGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHVVKLL*LTCSRG
Trigger: CCCTCTGCTGCAGGTAAGTCAGAGCAGCTTTACCAC...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGGGCCACTGTGGTTGTaGAGCTGTCTATGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSGPLWL*SCLCSS
Trigger: TGAGGAACATAGACAGCTTCACAACCACAGTGGCCC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456763.6
CDS-3UTR GCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGCTCTCGTCGGTTTCCTaGCTTACTCCTGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGELSSVS*LTPAQF
Trigger: AAACTGCGCAGGAGTAAGGCAGGAAACCGACGAGAG...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACCATACTTGTGCTCCTaGAGCTCGGCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEPYLCS*SSATWL
Trigger: CAGCCAGGTGGCCGAGCTGCAGGAGCACAAGTATGG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTCTCAGAGAAGGACACTaGTGTCACCCGACTGGACAC +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGLREGH*CHPTGH
Trigger: GTGTCCAGTCGGGTGACAGCAGTGTCCTTCTCTGAG...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCTGGAGGGTGGAGCCATaGACCCCGGAGCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGWRVEP*TPELSV
Trigger: CACAGAGAGCTCCGGGGTGCATGGCTCCACCCTCCA...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCCACACACCGAGCGGATaGCCACGCGGGGATCCAACA +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGHTPSG*PRGDPT
Trigger: TGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCAGTGCGGAAGTAGATaGTCTTGTCTGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSQCGSR*SCLLHS
Trigger: GCTGTGGAGCAGACAAGAGCATCTACTTCCGCACTG...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTGTGTCCGTGTGAACTaGACTCCATCTCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLCVRVN*TPSPDF
Trigger: GAAGTCTGGAGATGGAGTGCAGTTCACACGGACACA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGGGGACCGAGGCCAGTaGCTTCTTGGTACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFGDRGQ*LLGTLG
Trigger: GCCAAGAGTACCAAGAAGGCACTGGCCTCGGTCCCC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCGCCAGTGTTTCCAGCTaGCGCAGATCCAGCATGGAT +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLASVSS*RRSSMD
Trigger: ATCCATGCTGGATCTGCGGCAGCTGGAAACACTGGC...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAAGGGCCTCCTGCCCATaGTTCCTGGGACCAGATGGG +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSRASCP*FLGPDG
Trigger: CCCATCTGGTCCCAGGAAGCATGGGCAGGAGGCCCT...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCCCCCGGGCTGGAGCCTaGACTTGGAACTCACTGGTA +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFPRAGA*TWNSLV
Trigger: TACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGG...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGTTTCTGAGCTCCTGCTaGCTGGGTACACTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQFLSSC*LGTLFP
Trigger: TGGGAAGAGTGTACCCAGGCAGCAGGAGCTCAGAAA...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTGCACTGTCAGGGCTGTaGTTTTCTGAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSALSGL*FSELLL
Trigger: CAGCAGGAGCTCAGAAAAGCACAGCCCTGACAGTGC...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGTGGAAAGGCAGCTGCTaGTGTAATCCACAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEWKGSC*CNPQSR
Trigger: CCTGCTCTGTGGATTACAGCAGCAGCTGCCTTTCCA...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGGCTGGAAAGGCAGCTaGTGCTGTAATCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGGWKGS*CCNPQS
Trigger: GCTCTGTGGATTACAGCAGCAGCTGCCTTTCCAGCC...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTGGCTGGAAAGGCAGCTaGTGCTGTAATCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSGWKGS*CCNPQS
Trigger: GCTCTGTGGATTACAGCAGCAGCTGCCTTTCCAGCC...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGCCCATAGGGGCCCATaGCTCCCTCCTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEAHRGP*LPPLLP
Trigger: AGGAAGAAGAGGAGGGAGGCATGGGCCCCTATGGGC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTCTGGAGTCTGGGGGCTaGCCTCCTGTAGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCLESGG*PPVAHR
Trigger: CCTATGGGCTACAGGAGGGCAGCCCCCAGACTCCAG...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GACCATCCTGAGCTTCGATCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCCAGAGTCTCAAAGTaGTGTTTTAGAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: DHPELRSPETAVRLVKGPARVSK*CFRNCS
Trigger: GGAGCAGTTTCTAAAACAGCACTTTGAGACTCTGGC...AGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGATCGAAGCTCAGGATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGGGGCGGGTCTGTACTTaGAACAGGAATCGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEGRVCT*NRNREE
Trigger: CTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGGGCGGGTCTGTACTTaGAACAGGAATCGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSGRVCT*NRNREE
Trigger: CTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGGGGATTGGCACCATTaGCTCTCGGCTGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEGDWHH*LSAAHQ
Trigger: CTGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACATGTGGCACCAGACTGTaGACAGACTGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: MVISELRRHTNMQLSPDTCGTRL*TDWAFW
Trigger: CCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACA...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTCCCCAACAGAGATACTaGGGGATATCTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSPQQRY*GISWPW
Trigger: CCATGGCCAAGATATCCCGCAGTATCTCTGTTGGGG...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGCTGGGCACAGGGGCTaGTGGGCCCAGGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFAGHRG*WAQDEP
Trigger: AGGCTCATCCTGGGCCCAGCAGCCCCTGTGCCCAGC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp CTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATCTGCCCCTGGCTTGGTaGATTCCATGGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPLLHHPQLALQGLRRCHLPLAW*IPWGWE
Trigger: CTCCCAACCCCATGGAATGCACCAAGCCAGGGGCAG...ATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCACCAGCTGCTCACACTaGTCCAGGCTCACCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGTSCSH*SRLTAG
Trigger: GCCAGCGGTGAGCCTGGAGCAGTGTGAGCAGCTGGT...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGAATGGGAGTGGAATGTaGGGGCTCAGGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLNGSGM*GLRSKY
Trigger: GTATTTGGACCTGAGCCCGCACATTCCACTCCCATT...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCCACAGGGAAATACAATaGTGGGCCCCTCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLHREIQ*WAPLGG
Trigger: CCCTCCAAGAGGGGCCCAGCATTGTATTTCCCTGTG...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACAGCACACCCGTGGGTaGCCAGCACTGCCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSQHTRG*PALPLR
Trigger: CCTCAAAGGCAGTGCTGGGCACCCACGGGTGTGCTG...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTTTCTTTATAAGCCTCTaGCTATGGCGCAGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSFFISL*LWRSRA
Trigger: CGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAA...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAATGCAGTGGGCCACTGTaGTCCTCAGCTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPECSGPL*SSAPPT
Trigger: AGTGGGTGGAGCTGAGGACCACAGTGGCCCACTGCA...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCTGCAGTGGGCCACTGTaGTCCTCAGCTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFCSGPL*SSAPPT
Trigger: AGTGGGTGGAGCTGAGGACCACAGTGGCCCACTGCA...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAATCTGTCCCCAGAGCATaGGGTCGGGGCAAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPESVPRA*GRGKVL
Trigger: TAGCACCTTGCCCCGACCCCATGCTCTGGGGACAGA...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGTGGTGTCTGGATACCTaGCATTCGCCACTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEWCLDT*HSPLQR
Trigger: TCTCTGGAGTGGCGAATGCCAGGTATCCAGACACCA...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000514566.5
CDS-3UTR CCA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGACAAAGGTCAAGGCAATaGTGTCTGGATACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRQRSRQ*CLDTWH
Trigger: ATGCCAGGTATCCAGACACCATTGCCTTGACCTTTG...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGGGGGCAGGCAGGCCTaGTTACTATCCTTCACCTCG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEGGRQA*LLSFTS
Trigger: CGAGGTGAAGGATAGTAACCAGGCCTGCCTGCCCCC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTTGTTCCACAGGCGGATaGTGTTGTCTGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSCSTGG*CCLRSR
Trigger: CCTGCTCCTCAGACAACACCATCCGCCTGTGGAACA...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACTGTTCCACAGGCGGATaGTGTTGTCTGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHCSTGG*CCLRSR
Trigger: CCTGCTCCTCAGACAACACCATCCGCCTGTGGAACA...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCTTTCAGACCTGTGTCTaGCTTAGAATACTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: MREPVQETALMGPGAGWVFQTCV*LRILQA
Trigger: TGCCTGGAGTATTCTAAGCCAGACACAGGTCTGAAA...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGCGAATATTTCGGTCCTaGCAGCCGATAGCCGTGTAC +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGERIFRS*QPIAVY
Trigger: GTACACGGCTATCGGCTGCCAGGACCGAAATATTCG...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGTCTTGTCAGAACAGCTaGTGGCAATGTAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVSCQNS*WQCRSL
Trigger: CAGGGATCTACATTGCCACCAGCTGTTCTGACAAGA...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGAGTGGCCAAACATGGTaGCCACGCACTCGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWSGQTW*PRTRLR
Trigger: CCTCAGGCGAGTGCGTGGCCACCATGTTTGGCCACT...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAAGTGGCCAAACATGGTaGCCACGCACTCGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPESGQTW*PRTRLR
Trigger: CCTCAGGCGAGTGCGTGGCCACCATGTTTGGCCACT...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGTGACAATCTCTGAGTaGCCAAACATGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSVTISE*PNMVAT
Trigger: CGTGGCCACCATGTTTGGCCACTCAGAGATTGTCAC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATCCTTTGGGGAGAGGATaGTCCTTGCTGCTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDPLGRG*SLLLAA
Trigger: GGCGGCAAGCAGCAAGGACCATCCTCTCCCCAAAGG...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCGGTCCAGAAGCCCTTTaGGGAGAGGATGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: CNRNREEILRDSDLSGTCGPEAL*GEDGPC
Trigger: GCAAGGACCATCCTCTCCCCAAAGGGCTTCTGGACC...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCGGGCCTGGTGCCGGTTaGGTCCAGAAGCCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLGPGAG*VQKPFG
Trigger: CCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCC...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGAAGGACGGGCAGTGCTaGAAGTTCTTCTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQKDGQC*KFFFSP
Trigger: GGGACTGAAGAAGAACTTCCAGCACTGCCCGTCCTT...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGCTCAGTTCCACACCTaGCTGAACCCAGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFAQFHT*LNPAPS
Trigger: AGAGGGCGCTGGGTTCAGCCAGGTGTGGAACTGAGC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATGCTCAGTTCCACACCTaGCTGAACCCAGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LPLLHHPQLALQGLRRCHAQFHT*LNPAPS
Trigger: AGAGGGCGCTGGGTTCAGCCAGGTGTGGAACTGAGC...ATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGAGGGGGCTTTTCATTCTaGCTAGTGAGTGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRGGFSF*LVSEVS
Trigger: TGAGACTTCACTCACTAGCCAGAATGAAAAGCCCCC...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGAGCAGGTTCCAGATCTTaGGCAAAGACCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGAGSRS*AKTPSS
Trigger: AGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGACTCACTGGTATCCATaGTGGGGTTGTCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQTHWYP*WGCHSA
Trigger: AGCCGAGTGACAACCCCACCATGGATACCAGTGAGT...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGACTCACTGGTATCCATaGTGGGGTTGTCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGETHWYP*WGCHSA
Trigger: AGCCGAGTGACAACCCCACCATGGATACCAGTGAGT...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp ATACGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGGCACTTGGAACTCACTaGTATCCATGGTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: IRSPDARCCPLGLTHTERALGTH*YPWWGC
Trigger: ACAACCCCACCATGGATACCAGTGAGTTCCAAGTGC...CCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGGCTGGAGCCTGCACTTaGAACTCACTGGTATCCATG +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEAGACT*NSLVSM
Trigger: CATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGC...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCGCTGGAGCCTGCACTTaGAACTCACTGGTATCCATG +
Preference number: 4 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPAGACT*NSLVSM
Trigger: CATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGC...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGCTGGAGCCTGCACTTaGAACTCACTGGTATCCATG +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSAGACT*NSLVSM
Trigger: CATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCCAGAGTTCCCCGGGCTaGAGCCTGCACTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFQSSPG*SLHLEL
Trigger: GAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTG...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACAGAGTTCCCCGGGCTaGAGCCTGCACTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEQSSPG*SLHLEL
Trigger: GAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTCAGAGTTCCCCGGGCTaGAGCCTGCACTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPQSSPG*SLHLEL
Trigger: GAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTG...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGGTGCTCCAGGGGGATTaGCACCATTGCCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWVLQGD*HHCLSA
Trigger: AGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGCAC...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAGACTGTGCACAGACTaGGCCTTCTGGAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSRLCTD*AFWSPE
Trigger: TTCTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCT...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGAAGGGGCCTGCAGACTaGCCTCATGTCTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RNREEILRDSDLSGTCTGKGPAD*PHVFPV
Trigger: CACAGGAAAGACATGAGGCCAGTCTGCAGGCCCCTT...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTTGGCCATGGAACTGGTaGTGGGGTTCTGATAGGAGT +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGWPWNW*WGSDRS
Trigger: ACTCCTATCAGAACCCCACCACCAGTTCCATGGCCA...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGGGATATCTTGGCCATaGAACTGGTGGTGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSGISWP*NWWWGS
Trigger: AGAACCCCACCACCAGTTCCATGGCCAAGATATCCC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTGCAGTTTGGAATCGCTaGAGCATTCATTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGAVWNR*SIHSLG
Trigger: CCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGC...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGAGAGGGGCTGCAGTTTaGAATCGCTGGAGCATTCAT +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLRGAAV*NRWSIH
Trigger: ATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCT...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTCCCACGAGGAGCGGCTaGGAAGGCTGCTTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGPTRSG*EGCFAS
Trigger: AGAGGCAAAGCAGCCTTCCCAGCCGCTCCTCGTGGG...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCCCACTGGAGGGGCTGTaGAGGCAGGAGTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFPLEGL*RQEFQG
Trigger: TCCTTGGAACTCCTGCCTCCACAGCCCCTCCAGTGG...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACCACTGGAGGGGCTGTaGAGGCAGGAGTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEPLEGL*RQEFQG
Trigger: TCCTTGGAACTCCTGCCTCCACAGCCCCTCCAGTGG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGTGAAGGCCCACAGTTaGCTGACGGGCACTGAATAC +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGVKAHS*LTGTEY
Trigger: GTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCAC...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACCTCTTGGAGGGAGAATaGGAGTGGAATGTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHLLEGE*EWNVRA
Trigger: AGCCCGCACATTCCACTCCCATTCTCCCTCCAAGAG...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTGCTCCAGCAGCCGGCTaGGGTCCAGGGTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLAPAAG*GPGWRT
Trigger: TGTCCTCCACCCTGGACCCCAGCCGGCTGCTGGAGC...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCAGGCGGGGGCAAATCTaGAGTGGGGCGGCGGTTGCC +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFRRGQI*SGAAVA
Trigger: GGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCT...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CAA 72 bp GAGAAGGACACTGCTGTCACCCGACTGGACACCTTGTaGGAGGCCACCACAATGTTTTTCTTCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: EKDTAVTRLDTL*EATTMFFFQAH
Trigger: GTGGGCCTGGAAGAAAAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTCGGGTGACAGCAGTGTCCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR TCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCTTCCACAGCCATTATaGCGAGAAACCCTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSLPQPL*RETLWD
Trigger: GTCCCAAAGGGTTTCTCGTCATAATGGCTGTGGAAG...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTCCGGCTGGTAATGGTTaGCCCTTCCACAGCCATTAT +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGPAGNG*PFHSHY
Trigger: ATAATGGCTGTGGAAGGGTCAACCATTACCAGCCGG...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCCGGCTGGTAATGGTTaGCCCTTCCACAGCCATTAT +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDPAGNG*PFHSHY
Trigger: ATAATGGCTGTGGAAGGGTCAACCATTACCAGCCGG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCATTTTCCTGGAACTGTTaGGGATGTGGTGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQAFSWNC*GCGAVC
Trigger: ACAAACAGCACCACATCCTCAACAGTTCCAGGAAAA...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGAGAAGGCAAGGGCAGTaGTGGTTTTCCTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQRRQGQ*WFSWNC
Trigger: ACAGTTCCAGGAAAACCATCACTGCCCTTGCCTTCT...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGTCGGTTGCCTGCAGTaGCAAAGTAGCTGCAATCCT +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGVGCLQ*QSSCNP
Trigger: AGGATTGCAGCTACTTTGTCACTGCAGGCAACCGAC...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTCACAGGCCACATCAGTaGATAGGTTGTTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGHRPHQ*IGCSVA
Trigger: AGCTACGGAACAACCTATTCACTGATGTGGCCTGTG...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCGCAGCCCTGAGGACGTaGTGCAGAAGGTACTGTCCG +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGAALRT*CRRYCP
Trigger: CGGACAGTACCTTCTGCATCACGTCCTCAGGGCTGC...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTACACAAGACAGCCACTaGTTAGTAGGATCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPTQDSH*LVGSKV
Trigger: GACCTTTGATCCTACTAATCAGTGGCTGTCTTGTGT...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCATCTCACTCAGGGACTaGAGTTCGTGCACCCTAAGT +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSISLRD*SSCTLS
Trigger: ACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGAT...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACGTGGTGTGTCCGTGTaGACTGCACTCCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPERGVSV*TALHLQ
Trigger: CTGGAGATGGAGTGCAGTTCACACGGACACACCACG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR TCA 90 bp GGTCCTCAGCTCCACCCACTTGTCCAAAAGCCTTCGATCACTGAACTCGCACAGGCCGTCCTCACCCTGTaGCCCTTTAAACAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GPQLHPLVQKPSITELAQAVLTL*PFKQLL
Trigger: AAGAAGCTGTTTAAAGGGTCACAGGGTGAGGACGGC...CTGTGCGAGTTCAGTGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR TCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGTCCAGGAGACAGCATTaGTGGGGCCTGGTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLSRRQH*WGLVPV
Trigger: AACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGA...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAGTTCCACACCTGGCTaGACCCAGCGCCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFSSTPG*TQRPLL
Trigger: AAGAAGAGGGCGCTGGGTTCAGCCAGGTGTGGAACT...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAAGATGCCATCCACACTaGGGGGCTCCGTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSRCHPH*GAPCSQ
Trigger: CTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCT...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACTGGCTCTTCAAGGTCTaGGGAGATGCCATCCACACT +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHWLFKV*GDAIHT
Trigger: AGTGTGGATGGCATCTCCTCAGACCTTGAAGAGCCA...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCTGGCTCTTCAAGGTCTaGGGAGATGCCATCCACACT +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLWLFKV*GDAIHT
Trigger: AGTGTGGATGGCATCTCCTCAGACCTTGAAGAGCCA...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CCATGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGTGGCTCTTCAAGGTCTaGGGAGATGCCATCCACACT +
Preference number: 4 (lower is better)
Translates to: PWWGCHSAPGRQYHLQWVWLFKV*GDAIHT
Trigger: AGTGTGGATGGCATCTCCTCAGACCTTGAAGAGCCA...CACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGCAGCTTGCTGAGTGGTaGGACTCGGATGGGGGCATG +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLQLAEW*DSDGGM
Trigger: CATGCCCCCATCCGAGTCTCACCACTCAGCAAGCTG...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCCAGCTTGCTGAGTGGTaGGACTCGGATGGGGGCATG +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGQLAEW*DSDGGM
Trigger: CATGCCCCCATCCGAGTCTCACCACTCAGCAAGCTG...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTCTTGGAAGAGGCTGCTaGCTGGCAGTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCLGRGC*LAVAGH
Trigger: GTGCCCAGCAACTGCCAGTCAGCAGCCTCTTCCAAG...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTCCGACTTTGCTCTGCTaGGGGCATCTTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGPTLLC*GHLAAS
Trigger: GCTGGCTGCAAGATGCCCTCAGCAGAGCAAAGTCGG...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCCCGACTTTGCTCTGCTaGGGGCATCTTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGPTLLC*GHLAAS
Trigger: GCTGGCTGCAAGATGCCCTCAGCAGAGCAAAGTCGG...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCAAGAGAAGGTGTCTCTaGGGAGCTGGGCAATCCGAC +
Preference number: 4 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFKRRCL*GAGQSD
Trigger: GTCGGATTGCCCAGCTCCTCAGAGACACCTTCTCTT...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACTCGAAGCAACAGTTCTaGGTATTGCTCCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDSKQQF*VLLQQG
Trigger: GCCCTGCTGGAGCAATACTCAGAACTGTTGCTTCGA...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGCACGTGCATGCGTGTaGTCTCATCTGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEARACV*SHLWLR
Trigger: CCTCAGCCACAGATGAGATCACACGCATGCACGTGC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACACACACCTTGGAGCTaGGGTCCTCTCGTCGGTTTC +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEHTPWS*GPLVGF
Trigger: GAAACCGACGAGAGGACCTCAGCTCCAAGGTGTGTG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR GCA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCCTGTTGAGGATGTGGTaGTGTTTGTGTTTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPLLRMW*CLCFRG
Trigger: TCCCCGGAAACACAAACAGCACCACATCCTCAACAG...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCGCACGGCAGGCATGTaGCCACTCTCTCCAGTGACC +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLRTAGM*PLSPVT
Trigger: GGTCACTGGAGAGAGTGGGCACATGCCTGCCGTGCG...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCTGGAGGGTGGAGCCATaGACCCCGGAGCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLWRVEP*TPELSV
Trigger: CACAGAGAGCTCCGGGGTGCATGGCTCCACCCTCCA...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCGGGATCCAACAGGGATaGATCAGCTTTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLGIQQG*ISFVSS
Trigger: GGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCC...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTTCCCCTGATGCTAGATaGTGTCCATTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSSPDAR*CPLGLT
Trigger: TGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGA...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTGTTCGTCCAGCGTCTaGTGTAGGCTGTACTCCCGC +
Preference number: 4 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWCSSSV*CRLYSR
Trigger: GCGGGAGTACAGCCTACAGCAGACGCTGGACGAACA...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCAGACTTCTGCGCAGTaGGGAAGTAGATGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSQTSAQ*GSRCSC
Trigger: ACAAGAGCATCTACTTCCGCACTGCGCAGAAGTCTG...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCTGTGTCCGTGTGAACTaGACTCCATCTCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSCVRVN*TPSPDF
Trigger: GAAGTCTGGAGATGGAGTGCAGTTCACACGGACACA...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACGGCAAGGACGGGCAGTaGTGGAAGTTCTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHGKDGQ*WKFFFS
Trigger: ACTGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCC...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGGGGACCGAGGCCAGTaGCTTCTTGGTACTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSGDRGQ*LLGTLG
Trigger: GCCAAGAGTACCAAGAAGGCACTGGCCTCGGTCCCC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGTTTCTGAGCTCCTGCTaGCTGGGTACACTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGFLSSC*LGTLFP
Trigger: TGGGAAGAGTGTACCCAGGCAGCAGGAGCTCAGAAA...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCGCACTGTCAGGGCTGTaGTTTTCTGAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CNRNREEILRDSDLSGTCALSGL*FSELLL
Trigger: CAGCAGGAGCTCAGAAAAGCACAGCCCTGACAGTGC...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACGCACTGTCAGGGCTGTaGTTTTCTGAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRVCTCNRNREEILRDSDALSGL*FSELLL
Trigger: CAGCAGGAGCTCAGAAAAGCACAGCCCTGACAGTGC...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCCCCCAACAGAGATACTaGGGGATATCTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSPQQRY*GISWPW
Trigger: CCATGGCCAAGATATCCCGCAGTATCTCTGTTGGGG...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGCTGCCGCGGAGCTCTaGCACCAGCTGCTCACACTG +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFAAAEL*HQLLTL
Trigger: CAGTGTGAGCAGCTGGTGGCAGAGCTCCGCGGCAGC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGCTGCTGAGGGCATCTTaGAGCCAGCCACCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLLLRAS*SQPPSG
Trigger: ACCACTCGGTGGCTGGCTGCAAGATGCCCTCAGCAG...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAACAGTTCTGAGTATTaGTCCAGCAGGGCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSNSSEY*SSRACV
Trigger: GACACAGGCCCTGCTGGAGCAATACTCAGAACTGTT...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGAATGGGAGTGGAATGTaGGGGCTCAGGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGENGSGM*GLRSKY
Trigger: GTATTTGGACCTGAGCCCGCACATTCCACTCCCATT...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTCCAGAGCTTCATGTTTaGCCAGGTGAGGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGPELHV*PGEGLL
Trigger: CAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGG...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCAAGCATCATTCAGGATaGAGGGAGAAGGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSKHHSG*REKVAS
Trigger: AGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTT...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGCAACACTCAACAGCGTaGTGTGCAGGTAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGQHSTA*CAGRCV
Trigger: CACACACCTACCTGCACAGCACGCTGTTGAGTGTTG...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCACTGCACCCCTTTTCTaGTCCCTGATAGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSTAPLF*SLIGVP
Trigger: TGGAACACCTATCAGGGAGCAGAAAAGGGGTGCAGT...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGCCTCAACTCTTCAACTaGCTCACGACATGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGPQLFN*LTTWSH
Trigger: GTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGG...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCCTCAACTCTTCAACTaGCTCACGACATGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDPQLFN*LTTWSH
Trigger: GTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGGACTGGACACCTTGTTaGAGGCCACCACAATGTTTT +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLDWTPC*RPPQCF
Trigger: AAAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTC...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTTGGTGTCTGGATACCTaGCATTCGCCACTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSWCLDT*HSPLQR
Trigger: TCTCTGGAGTGGCGAATGCCAGGTATCCAGACACCA...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCCTTGCCCACTTTCTTaGGGTCCCTCACATCCCAAA +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDPCPLS*GPSHPK
Trigger: TTTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAGG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTCCTTGCCCACTTTCTTaGGGTCCCTCACATCCCAAA +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSPCPLS*GPSHPK
Trigger: TTTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAGG...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCTGTTCCACAGGCGGATaGTGTTGTCTGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: CNRNREEILRDSDLSGTCCSTGG*CCLRSR
Trigger: CCTGCTCCTCAGACAACACCATCCGCCTGTGGAACA...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512970.5
CDS-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCTGTTTCGGTGGAGGGTaGAGCCATGCACCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLCFGGG*SHAPRS
Trigger: GCTCCGGGGTGCATGGCTCCACCCTCCACCGAAACA...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGGTCTTCCGCACCACGTaGTGTGTCCGTGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWVFRTT*CVRVNC
Trigger: GCAGTTCACACGGACACACCACGTGGTGCGGAAGAC...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCCGTGTACTTCCAGCTaGGCTCCACATCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDPCTSS*APHPCH
Trigger: ATGACATGGATGTGGAGCCCAGCTGGAAGTACACGG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGCGAATATTTCGGTCCTaGCAGCCGATAGCCGTGTAC +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGRIFRS*QPIAVY
Trigger: GTACACGGCTATCGGCTGCCAGGACCGAAATATTCG...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATAGGAGAAGTCAAAAATaGAGAGATTCTTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHRRSQK*RDSCQN
Trigger: GTTCTGACAAGAATCTCTCCATTTTTGACTTCTCCT...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTAGTGGCCAAACATGGTaGCCACGCACTCGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCSGQTW*PRTRLR
Trigger: CCTCAGGCGAGTGCGTGGCCACCATGTTTGGCCACT...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGTGACAATCTCTGAGTaGCCAAACATGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGVTISE*PNMVAT
Trigger: CGTGGCCACCATGTTTGGCCACTCAGAGATTGTCAC...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCGTGACAATCTCTGAGTaGCCAAACATGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSVTISE*PNMVAT
Trigger: CGTGGCCACCATGTTTGGCCACTCAGAGATTGTCAC...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGGGCCTGGTGCCGGTTaGGTCCAGAAGCCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFGPGAG*VQKPFG
Trigger: CCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAGCATTGATGGGGCCTaGTGCCGGTTGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFSIDGA*CRLGPE
Trigger: TTCTGGACCCAACCGGCACCAGGCCCCATCAATGCT...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACAAGGACGGGCAGTGCTaGAAGTTCTTCTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDKDGQC*KFFFSP
Trigger: GGGACTGAAGAAGAACTTCCAGCACTGCCCGTCCTT...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCAAGGACGGGCAGTGCTaGAAGTTCTTCTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLKDGQC*KFFFSP
Trigger: GGGACTGAAGAAGAACTTCCAGCACTGCCCGTCCTT...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACAAGGCCAGTGCCTTCTTaGTACTCTTGGCAAGGACGG +
Preference number: 4 (lower is better)
Translates to: MVISELRRHTNMQLSPDTRPVPS*YSWQGR
Trigger: CCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCT...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGCGACTCATCTCCCAGTaGGACAGGCTTCGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWRLISQ*DRLRGK
Trigger: TTTGCCCCGAAGCCTGTCCCACTGGGAGATGAGTCG...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATTCTTCTTCTGGGTCCTaGGTTGGCTGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPLLHHPQLALQGLRRCHSSSGS*VGCRSW
Trigger: CCAGCTCCTGCAGCCAACCCAGGACCCAGAAGAAGA...ATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCGCTCAGTTCCACACCTaGCTGAACCCAGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSAQFHT*LNPAPS
Trigger: AGAGGGCGCTGGGTTCAGCCAGGTGTGGAACTGAGC...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTCTTCCTGGGACCAGATaGGATGATGGCCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPLPGTR*DDGQRV
Trigger: GACTCGCTGGCCATCATCCCATCTGGTCCCAGGAAG...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATCTTCCTGGGACCAGATaGGATGATGGCCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDLPGTR*DDGQRV
Trigger: GACTCGCTGGCCATCATCCCATCTGGTCCCAGGAAG...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGCACTTGGAACTCACTaGTATCCATGGTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGALGTH*YPWWGC
Trigger: ACAACCCCACCATGGATACCAGTGAGTTCCAAGTGC...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCGCACTTGGAACTCACTaGTATCCATGGTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSALGTH*YPWWGC
Trigger: ACAACCCCACCATGGATACCAGTGAGTTCCAAGTGC...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACTTTAGAAACTGCTCCTaGTCTGGAGTCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHFRNCS*SGVWGL
Trigger: CAGCCCCCAGACTCCAGACCAGGAGCAGTTTCTAAA...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGTTTAGAAACTGCTCCTaGTCTGGAGTCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGFRNCS*SGVWGL
Trigger: CAGCCCCCAGACTCCAGACCAGGAGCAGTTTCTAAA...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTGATGCCTGTGGCACCTaGGCTGGTCTCGACATCAGT +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPDACGT*AGLDIS
Trigger: ACTGATGTCGAGACCAGCCCAGGTGCCACAGGCATC...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGGATGCCTGTGGCACCTaGGCTGGTCTCGACATCAGT +
Preference number: 4 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWDACGT*AGLDIS
Trigger: ACTGATGTCGAGACCAGCCCAGGTGCCACAGGCATC...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATGTTGAGACGGCATCGTaGCAACAGCACAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLLHHPQLALQGLRRCHVETAS*QQHRGC
Trigger: GCAGCCTCTGTGCTGTTGCCACGATGCCGTCTCAAC...ATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCCTGTGGCCACTCTCTTaGGAGCCCAGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSLWPLS*EPSCCQ
Trigger: CTGACAGCAGCTGGGCTCCCAAGAGAGTGGCCACAG...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCCCATGGAACTGGTGGTaGGGTTCTGATAGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLPWNWW*GSDRSE
Trigger: CTCACTCCTATCAGAACCCCACCACCAGTTCCATGG...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACCCATGGAACTGGTGGTaGGGTTCTGATAGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHPWNWW*GSDRSE
Trigger: CTCACTCCTATCAGAACCCCACCACCAGTTCCATGG...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGTGGCCATGGAACTGGTaGTGGGGTTCTGATAGGAGT +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGWPWNW*WGSDRS
Trigger: ACTCCTATCAGAACCCCACCACCAGTTCCATGGCCA...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCTCTTGGCCATGGAACTaGTGGTGGGGTTCTGATAGG +
Preference number: 4 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSSWPWN*WWGSDR
Trigger: CCTATCAGAACCCCACCACCAGTTCCATGGCCAAGA...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGGTCAGGCAGTGGTTTaGGGATGTCCAGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEGQAVV*GCPGPG
Trigger: ACCTGGTCCTGGACATCCCCAAACCACTGCCTGACC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATAGGACGGTCAGGCAGTaGTTTGGGGATGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LPLLHHPQLALQGLRRCHRTVRQ*FGDVQD
Trigger: GTCCTGGACATCCCCAAACCACTGCCTGACCGTCCT...ATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTGAAGAGGCTGCTGACTaGCAGTTGCTGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCEEAAD*QLLGTG
Trigger: CCCTGTGCCCAGCAACTGCCAGTCAGCAGCCTCTTC...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACGTGTCTCTGAGGAGCTaGGCAATCCGACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDVSLRS*AIRLCS
Trigger: AGAGCAAAGTCGGATTGCCCAGCTCCTCAGAGACAC...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTCCACTGGAGGGGCTGTaGAGGCAGGAGTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCPLEGL*RQEFQG
Trigger: TCCTTGGAACTCCTGCCTCCACAGCCCCTCCAGTGG...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCTGAGCTCCAGGTATTaGGGAAAACCACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDLSSRY*GKPPCS
Trigger: AGAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCCCCTGGAGGGCCAGATaGCTCTGCCTTTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSPWRAR*LCLSEL
Trigger: GAGCTCAGAAAGGCAGAGCCATCTGGCCCTCCAGGG...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAAAGTCTCCTGATGGCTaGGGACACCCTGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSKSPDG*GHPGGP
Trigger: TGGCCCTCCAGGGTGTCCCCAGCCATCAGGAGACTT...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGAAGTCTCCTGATGGCTaGGGACACCCTGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLKSPDG*GHPGGP
Trigger: TGGCCCTCCAGGGTGTCCCCAGCCATCAGGAGACTT...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCAAGTCTCCTGATGGCTaGGGACACCCTGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSKSPDG*GHPGGP
Trigger: TGGCCCTCCAGGGTGTCCCCAGCCATCAGGAGACTT...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGAGGGAGAATGGGAGTaGAATGTGCGGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFEGEWE*NVRAQV
Trigger: GACCTGAGCCCGCACATTCCACTCCCATTCTCCCTC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGGGAAGGGCCAGGTTTaGAGCAGCTCAAGCGCACTC +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSGKGQV*SSSSAL
Trigger: GAGTGCGCTTGAGCTGCTCCAAACCTGGCCCTTCCC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCCAGCAGCAGGAGCTATaGTGGCACGATCGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFQQQEL*WHDRLK
Trigger: TTTGAGCCGATCGTGCCACCATAGCTCCTGCTGCTG...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512970.5
CDS-3UTR TCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCCTTCCACAGCCATTATaGCGAGAAACCCTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSLPQPL*RETLWD
Trigger: GTCCCAAAGGGTTTCTCGTCATAATGGCTGTGGAAG...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGATACTCCTGCGCAGTTTaGTGGATGGAGATCTCAACA +
Preference number: 4 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGYSCAV*WMEIST
Trigger: TGTTGAGATCTCCATCCATCAAACTGCGCAGGAGTA...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAAGGTCACCTTGGAGCTaGGGTCCTCTCGTCGGTTTC +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSRSPWS*GPLVGF
Trigger: GAAACCGACGAGAGGACCTCAGCTCCAAGGTGACCT...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGAGAAGGCAAGGGCAGTaGTGGTTTTCCTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGRRQGQ*WFSWNC
Trigger: ACAGTTCCAGGAAAACCATCACTGCCCTTGCCTTCT...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATGCCCACTCTCTCCAGTaGCCAAGTACTTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDAHSLQ*PSTCHQ
Trigger: CTGATGGCAAGTACTTGGTCACTGGAGAGAGTGGGC...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGCGAGATACCAGAATTTaGTGTGTCGGTTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGRDTRI*CVGCLQ
Trigger: CTGCAGGCAACCGACACATCAAATTCTGGTATCTCG...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCGAGATACCAGAATTTaGTGTGTCGGTTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDRDTRI*CVGCLQ
Trigger: CTGCAGGCAACCGACACATCAAATTCTGGTATCTCG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATAAAGCCTTCGATCACTaGACTCGCACAGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDKAFDH*TRTAAL
Trigger: CAGGGCTGCTGTGCGAGTTCAGTGATCGAAGGCTTT...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCCGTGGTGTGTCCGTGTaGACTGCACTCCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGRGVSV*TALHLQ
Trigger: CTGGAGATGGAGTGCAGTTCACACGGACACACCACG...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCAGTTCCACACCTGGCTaGACCCAGCGCCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGSSTPG*TQRPLL
Trigger: AAGAAGAGGGCGCTGGGTTCAGCCAGGTGTGGAACT...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCAGCTGCTGTCAGGGTTaGGACGGCATCGTGGCAACA +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSSCCQG*DGIVAT
Trigger: TGTTGCCACGATGCCGTCTCAACCCTGACAGCAGCT...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTGGGCCCGGCCTTTGGTaGCAGGAGAGAATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLGPGLW*QERMQP
Trigger: TGGCTGCATTCTCTCCTGTCACCAAAGGCCGGGCCC...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR TCA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACACTCTCAGTTGTACTGTaGGCTTTTCCTAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: MVISELRRHTNMQLSPDTLSVVL*AFPRPT
Trigger: GGTGGGCCTAGGAAAAGCTCACAGTACAACTGAGAG...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATCAGCTCCTGTCGCACTaGAGAGAAGGTGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LPLLHHPQLALQGLRRCHQLLSH*REGVSE
Trigger: CTCAGAGACACCTTCTCTTCAGTGCGACAGGAGCTG...ATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAAGGCTGCTTTGCCTCTaGACACTGCTCCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPERLLCL*TLLPAF
Trigger: GAAAGCAGGGAGCAGTGTTCAGAGGCAAAGCAGCCT...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR TCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTGGAGTTCCAAGGAAGTaGGGCAACAGTCAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSGVPRK*GNSQGN
Trigger: ATTTCCCTGACTGTTGCCTCACTTCCTTGGAACTCC...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGATCTCATCTGTGGCTaGGGTCCTCAGGAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSDLICG*GPQEVG
Trigger: GCCTACCTCCTGAGGACCTCAGCCACAGATGAGATC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCTGTTGAGGATGTGGTaGTGTTTGTGTTTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDLLRMW*CLCFRG
Trigger: TCCCCGGAAACACAAACAGCACCACATCCTCAACAG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTCTGTTGAGGATGTGGTaGTGTTTGTGTTTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGLLRMW*CLCFRG
Trigger: TCCCCGGAAACACAAACAGCACCACATCCTCAACAG...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTCACCTTTGAGGTCTTaGTGTCATCGAGATACCAGA +
Preference number: 4 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLSPLRS*CHRDTR
Trigger: TCTGGTATCTCGATGACAGCAAGACCTCAAAGGTGA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTGGAGGGTGGAGCCATaGACCCCGGAGCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLWRVEP*TPELSV
Trigger: CACAGAGAGCTCCGGGGTGCATGGCTCCACCCTCCA...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCGGGATCCAACAGGGATaGATCAGCTTTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CNRNREEILRDSDLSGTCGIQQG*ISFVSS
Trigger: GGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCC...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTCACACACCGAGCGGATaGCCACGCGGGGATCCAACA +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLHTPSG*PRGDPT
Trigger: TGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCTGTTCGTCCAGCGTCTaGTGTAGGCTGTACTCCCGC +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSCSSSV*CRLYSR
Trigger: GCGGGAGTACAGCCTACAGCAGACGCTGGACGAACA...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCTTGCCCATCACTGGCTaGAAACTTAACAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPLPITG*KLNSSD
Trigger: ATCACTGCTGTTAAGTTTGCAGCCAGTGATGGGCAA...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTCAGACTTCTGCGCAGTaGGGAAGTAGATGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSQTSAQ*GSRCSC
Trigger: ACAAGAGCATCTACTTCCGCACTGCGCAGAAGTCTG...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTAACTCGGCCAGACGCTaGCTCATGCTGATGGTCATC +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPNSARR*LMLMVI
Trigger: GATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTT...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCCCCGGGCTGGAGCCTaGACTTGGAACTCACTGGTA +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLPRAGA*TWNSLV
Trigger: TACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGG...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACAGCTTTTCTGAGCTCCTaGTGCCTGGGTACACTCTTC +
Preference number: 4 (lower is better)
Translates to: MVISELRRHTNMQLSPDTAFLSS*CLGTLF
Trigger: GAAGAGTGTACCCAGGCAGCAGGAGCTCAGAAAAGC...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCGGGCGGGTCTGTACTTaGAACAGGAATCGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: CNRNREEILRDSDLSGTCGRVCT*NRNREE
Trigger: CTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTGTGGCACCAGACTGTaGACAGACTGGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGCGTRL*TDWAFW
Trigger: CCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACA...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCCCAGAACTCAGAGTTTaGGTTCCATACGCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLPELRV*VPYAVP
Trigger: TGGAACGGCGTATGGAACGCAAACTCTGAGTTCTGG...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCCAGAACTCAGAGTTTaGGTTCCATACGCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDPELRV*VPYAVP
Trigger: TGGAACGGCGTATGGAACGCAAACTCTGAGTTCTGG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAGGGCCAGATGGCTCTaGCTTTCTGAGCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFRARWL*LSELQV
Trigger: TACCTGGAGCTCAGAAAGGCAGAGCCATCTGGCCCT...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTAGGGCCAGATGGCTCTaGCTTTCTGAGCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPRARWL*LSELQV
Trigger: TACCTGGAGCTCAGAAAGGCAGAGCCATCTGGCCCT...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACAATGGGAGTGGAATGTaGGGGCTCAGGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHNGSGM*GLRSKY
Trigger: GTATTTGGACCTGAGCCCGCACATTCCACTCCCATT...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGAGGGCTTACTGTCCTaGAGCAACATCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFEGLLS*SNIPQL
Trigger: CAGCTGTGGGATGTTGCTGCAGGACAGTAAGCCCTC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACACTGCACCCCTTTTCTaGTCCCTGATAGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHTAPLF*SLIGVP
Trigger: TGGAACACCTATCAGGGAGCAGAAAAGGGGTGCAGT...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACTTGGCTCACAGAGATaGAGTGGGCCACTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPELGSQR*SGPLWL
Trigger: CAACCACAGTGGCCCACTGCATCTCTGTGAGCCAAG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456763.6
CDS-3UTR CCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTCCCCGGCCCAGTCCTaGGTCTTGTCTCAACAGCGG +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLSPAQS*VLSQQR
Trigger: CCGCTGTTGAGACAAGACCCAGGACTGGGCCGGGGA...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCTGCAGTGGGCCACTGTaGTCCTCAGCTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLCSGPL*SSAPPT
Trigger: AGTGGGTGGAGCTGAGGACCACAGTGGCCCACTGCA...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACATGGTGTCTGGATACCTaGCATTCGCCACTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: MVISELRRHTNMQLSPDTWCLDT*HSPLQR
Trigger: TCTCTGGAGTGGCGAATGCCAGGTATCCAGACACCA...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR CCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGAGAATCTCAGAGTCATaGGCCTCCACCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGRISES*ASTFSI
Trigger: GATGCTGAAGGTGGAGGCCCATGACTCTGAGATTCT...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCCGTGTACTTCCAGCTaGGCTCCACATCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: GRVCTCNRNREEILRDSDPCTSS*APHPCH
Trigger: ATGACATGGATGTGGAGCCCAGCTGGAAGTACACGG...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCGAATATTTCGGTCCTaGCAGCCGATAGCCGTGTAC +
Preference number: 4 (lower is better)
Translates to: GRVCTCNRNREEILRDSDRIFRS*QPIAVY
Trigger: GTACACGGCTATCGGCTGCCAGGACCGAAATATTCG...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGTCTTCTTCTGGGTCCTaGGTTGGCTGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLSSSGS*VGCRSW
Trigger: CCAGCTCCTGCAGCCAACCCAGGACCCAGAAGAAGA...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGGGGGCTTTTCATTCTaGCTAGTGAGTGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSGGFSF*LVSEVS
Trigger: TGAGACTTCACTCACTAGCCAGAATGAAAAGCCCCC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGGGGGGCTTTTCATTCTaGCTAGTGAGTGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEGGFSF*LVSEVS
Trigger: TGAGACTTCACTCACTAGCCAGAATGAAAAGCCCCC...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCAATACCATCTTCAATaGGTGCAGGTTCCAGATCTT +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPQYHLQ*VQVPDL
Trigger: AAGATCTGGAACCTGCACCCATTGAAGATGGTATTG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACACTGGTATCCATGGTaGGGTTGTCACTCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSHWYPW*GCHSAP
Trigger: CGGAGCCGAGTGACAACCCCACCATGGATACCAGTG...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGCTGGAGCAGCTCCACTaGCCAGAGTCTCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWLEQLH*PESQSA
Trigger: AGCACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAG...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCTCACCAGATGCCTGTaGCACCTGGGCTGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLLTRCL*HLGWSR
Trigger: TCGAGACCAGCCCAGGTGCCACAGGCATCTGGTGAG...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGCTGTGGCCACTCTCTTaGGAGCCCAGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLLWPLS*EPSCCQ
Trigger: CTGACAGCAGCTGGGCTCCCAAGAGAGTGGCCACAG...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGTCCAGAAAAGGGGCTaGCTGTGGCCACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLVQKRG*LWPLSW
Trigger: CCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGAC...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGAAGGGGCCTGCAGACTaGCCTCATGTCTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWKGPAD*PHVFPV
Trigger: CACAGGAAAGACATGAGGCCAGTCTGCAGGCCCCTT...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTGTGGTGAGACTCGGATaGGGGCATGAGCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPVVRLG*GHELEV
Trigger: AACCTCAAGCTCATGCCCCCATCCGAGTCTCACCAC...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCAGGACGGTCAGGCAGTaGTTTGGGGATGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGRTVRQ*FGDVQD
Trigger: GTCCTGGACATCCCCAAACCACTGCCTGACCGTCCT...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTAGGACGGTCAGGCAGTaGTTTGGGGATGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCRTVRQ*FGDVQD
Trigger: GTCCTGGACATCCCCAAACCACTGCCTGACCGTCCT...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGCTGACTGGCAGTTGCTaGGCACAGGGGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWLTGSC*AQGLLG
Trigger: GCCCAGCAGCCCCTGTGCCCAGCAACTGCCAGTCAG...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGCAGTTTGGAATCGCTaGAGCATTCATTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGAVWNR*SIHSLG
Trigger: CCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGC...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGTGAAGGCCCACAGTTaGCTGACGGGCACTGAATAC +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFVKAHS*LTGTEY
Trigger: GTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCAC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTGAGGGAGAATGGGAGTaGAATGTGCGGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGEGEWE*NVRAQV
Trigger: GACCTGAGCCCGCACATTCCACTCCCATTCTCCCTC...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTATCCAGCACACCCGTaGGTGCCCAGCACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGYPAHP*VPSTAF
Trigger: AAAGGCAGTGCTGGGCACCCACGGGTGTGCTGGATA...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCATAAGCCTCTGCCTATaGCGCAGCAGGGCGGGTGAA +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSISLCL*RSRAGE
Trigger: TTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTAT...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTATAAGCCTCTGCCTATaGCGCAGCAGGGCGGGTGAA +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCISLCL*RSRAGE
Trigger: TTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTAT...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACCTTTGTCACCTAGGTTaGAGTGCAATGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHLCHLG*SAMARS
Trigger: AGATCGCGCCATTGCACTCCAACCTAGGTGACAAAG...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTGCGATGCTAGAGGAGTaGGGAAGGGCCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGAMLEE*GRARFG
Trigger: TCCAAACCTGGCCCTTCCCCACTCCTCTAGCATCGC...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGATTCTCACAAACTTCTaGCGAAGGGTAGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGILTNF*RRVAPS
Trigger: GGAGGGAGCTACCCTTCGCCAGAAGTTTGTGAGAAT...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTATTCTCACAAACTTCTaGCGAAGGGTAGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGILTNF*RRVAPS
Trigger: GGAGGGAGCTACCCTTCGCCAGAAGTTTGTGAGAAT...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
3UTR CAA 72 bp TTCATTCACTTGGGACAGGCTTCCAGAACTCAGAGTTaGCGTTCCATACGCCGTTCCACGGCTCGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: FIHLGQASRTQS*RSIRRSTARSN
Trigger: GTTGCTTCGAGCCGTGGAACGGCGTATGGAACGCAAACTCTGAGTTCTGGAAGCCTGTCCCAAGTGAATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
3UTR CAA 72 bp GGGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTaGGGACAGGCTTCCAGAACTCAGAGTTTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: GLQFGIAGAFIH*GQASRTQSLRS
Trigger: GGAACGCAAACTCTGAGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCTGTGTTTCCGGGGATTaGACAACACAACCACACACC +
Preference number: 4 (lower is better)
Translates to: CNRNREEILRDSDLSGTCCVSGD*TTQPHT
Trigger: GGTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACA...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCTCCAGGCCCACACGTTaGCGATCATGTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSSRPTR*RSCHAG
Trigger: ACCAGCATGACATGATCGTCAACGTGTGGGCCTGGA...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGCAGCCCTGAGGACGTaGTGCAGAAGGTACTGTCCG +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFAALRT*CRRYCP
Trigger: CGGACAGTACCTTCTGCATCACGTCCTCAGGGCTGC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCAAAGCCTTCGATCACTaGACTCGCACAGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGKAFDH*TRTAAL
Trigger: CAGGGCTGCTGTGCGAGTTCAGTGATCGAAGGCTTT...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGCCGTCCTCACCCTGTaGCCCTTTAAACAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFAVLTL*PFKQLL
Trigger: AAGAAGCTGTTTAAAGGGTCACAGGGTGAGGACGGC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ATACGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGCCCCAGACACAGAGATaGGATGTTTACAATCATTAC +
Preference number: 4 (lower is better)
Translates to: IRSPDARCCPLGLTHTERPQTQR*DVYNHY
Trigger: GTAATGATTGTAAACATCTCATCTCTGTGTCTGGGG...CCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGACGCTGCCTCATGCTaGTGGTCATCTCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSDAASC*WSSQSS
Trigger: TGAGCTCTGAGATGACCATCAGCATGAGGCAGCGTC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCGACGCTGCCTCATGCTaGTGGTCATCTCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSDAASC*WSSQSS
Trigger: TGAGCTCTGAGATGACCATCAGCATGAGGCAGCGTC...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTAGATGCCATCCACACTaGGGGGCTCCGTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLRCHPH*GAPCSQ
Trigger: CTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCT...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CTTGCCCACTTTCTTGGGGTCCCTCACATCCCAAACATAAATGCTATGATCGTTGAGCCCAGACCATCCTaGGCTTCGATCTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: LAHFLGVPHIPNINAMIVEPRPS*ASISRD
Trigger: GTCTCGGGAGATCGAAGCTCAGGATGGTCTGGGCTC...AACGATCATAGCATTTATGTTTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR TCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTGGCTGACGGGCACTaGATACCACATCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPLADGH*IPHHLS
Trigger: TGAGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAA...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTTCATGTTTGCCCAGGTaGGGGCTTACTGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCSCLPR*GLTVLQ
Trigger: CTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGA...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCTCCAACACAGGCTTCTaGCTAAGCATCATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSSNTGF*LSIIQD
Trigger: ATCCTGAATGATGCTTAGTCAGAAGCCTGTGTTGGA...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGTCACCTTTGAGGTCTTaGTGTCATCGAGATACCAGA +
Preference number: 4 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGESPLRS*CHRDTR
Trigger: TCTGGTATCTCGATGACAGCAAGACCTCAAAGGTGA...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGGGATCCAACAGGGATaGATCAGCTTTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFGIQQG*ISFVSS
Trigger: GGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGTGTTCGTCCAGCGTCTaGTGTAGGCTGTACTCCCGC +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLCSSSV*CRLYSR
Trigger: GCGGGAGTACAGCCTACAGCAGACGCTGGACGAACA...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACTGATCATGCGGACTTaGCCATCACTGGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPELIMRT*PSLAAN
Trigger: GTTTGCAGCCAGTGATGGGCAAGTCCGCATGATCAG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCCTGATCATGCGGACTTaGCCATCACTGGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFLIMRT*PSLAAN
Trigger: GTTTGCAGCCAGTGATGGGCAAGTCCGCATGATCAG...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCCAGTGCGGAAGTAGATaGTCTTGTCTGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFQCGSR*SCLLHS
Trigger: GCTGTGGAGCAGACAAGAGCATCTACTTCCGCACTG...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCTGTGTCCGTGTGAACTaGACTCCATCTCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: CNRNREEILRDSDLSGTCCVRVN*TPSPDF
Trigger: GAAGTCTGGAGATGGAGTGCAGTTCACACGGACACA...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGGCAAGGACGGGCAGTaGTGGAAGTTCTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEGKDGQ*WKFFFS
Trigger: ACTGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR GCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCTGGGCAATCCGACTTTaGTCTGCTGAGGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFWAIRL*SAEGIL
Trigger: CAAGATGCCCTCAGCAGAGCAAAGTCGGATTGCCCA...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCCAGAACTCAGAGTTTaGGTTCCATACGCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: GRVCTCNRNREEILRDSDPELRV*VPYAVP
Trigger: TGGAACGGCGTATGGAACGCAAACTCTGAGTTCTGG...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTCTAGATGGGGCAGGCTaGCCTCCTACCTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLLDGAG*PPTSHS
Trigger: GCTGTGAGAGGTAGGAGGGCAGCCTGCCCCATCTAG...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTGTTCACTTAGTGTACTaGACCCCTTTTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSVHLVY*TPFLLP
Trigger: AGGGAGCAGAAAAGGGGTGCAGTACACTAAGTGAAC...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTGACTGGACACCTTGTTaGAGGCCACCACAATGTTTT +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGDWTPC*RPPQCF
Trigger: AAAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTC...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCCAAGGCAATGGTGTCTaGATACCTGGCATTCGCCAC +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFQGNGV*IPGIRH
Trigger: GTGGCGAATGCCAGGTATCCAGACACCATTGCCTTG...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACAAGGCAATGGTGTCTaGATACCTGGCATTCGCCAC +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEQGNGV*IPGIRH
Trigger: GTGGCGAATGCCAGGTATCCAGACACCATTGCCTTG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000514566.5
CDS-3UTR CCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGCAAAGGTCAAGGCAATaGTGTCTGGATACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGQRSRQ*CLDTWH
Trigger: ATGCCAGGTATCCAGACACCATTGCCTTGACCTTTG...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTCAAAGGTCAAGGCAATaGTGTCTGGATACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSQRSRQ*CLDTWH
Trigger: ATGCCAGGTATCCAGACACCATTGCCTTGACCTTTG...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGTGTTCCACAGGCGGATaGTGTTGTCTGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLCSTGG*CCLRSR
Trigger: CCTGCTCCTCAGACAACACCATCCGCCTGTGGAACA...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACAAGAATCTCAGAGTCATaGGCCTCCACCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: MVISELRRHTNMQLSPDTRISES*ASTFSI
Trigger: GATGCTGAAGGTGGAGGCCCATGACTCTGAGATTCT...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCTTTCAGACCTGTGTCTaGCTTAGAATACTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPFQTCV*LRILQA
Trigger: TGCCTGGAGTATTCTAAGCCAGACACAGGTCTGAAA...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCCCGTGTACTTCCAGCTaGGCTCCACATCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFPCTSS*APHPCH
Trigger: ATGACATGGATGTGGAGCCCAGCTGGAAGTACACGG...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGTCTTGTCAGAACAGCTaGTGGCAATGTAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGSCQNS*WQCRSL
Trigger: CAGGGATCTACATTGCCACCAGCTGTTCTGACAAGA...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCAGCATTGATGGGGCCTaGTGCCGGTTGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLSIDGA*CRLGPE
Trigger: TTCTGGACCCAACCGGCACCAGGCCCCATCAATGCT...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTAGGCCAGTGCCTTCTTaGTACTCTTGGCAAGGACGG +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCRPVPS*YSWQGR
Trigger: CCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCT...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGAGGCCAGTGCCTTCTTaGTACTCTTGGCAAGGACGG +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLRPVPS*YSWQGR
Trigger: CCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCT...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGGTTGGCTGCAGGAGCTaGGTCCAGGAACCCCACGGA +
Preference number: 4 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWVGCRS*VQEPHG
Trigger: TCCGTGGGGTTCCTGGACCCAGCTCCTGCAGCCAAC...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCACTCACTGGTATCCATaGTGGGGTTGTCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFTHWYP*WGCHSA
Trigger: AGCCGAGTGACAACCCCACCATGGATACCAGTGAGT...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCCTGGAGCAGCTCCACTaGCCAGAGTCTCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGLEQLH*PESQSA
Trigger: AGCACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAG...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGATGCCTGTGGCACCTaGGCTGGTCTCGACATCAGT +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLDACGT*AGLDIS
Trigger: ACTGATGTCGAGACCAGCCCAGGTGCCACAGGCATC...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCCTCACCAGATGCCTGTaGCACCTGGGCTGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFLTRCL*HLGWSR
Trigger: TCGAGACCAGCCCAGGTGCCACAGGCATCTGGTGAG...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCAAGGGGCCTGCAGACTaGCCTCATGTCTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSKGPAD*PHVFPV
Trigger: CACAGGAAAGACATGAGGCCAGTCTGCAGGCCCCTT...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATCCATGGAACTGGTGGTaGGGTTCTGATAGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LPLLHHPQLALQGLRRCHPWNWW*GSDRSE
Trigger: CTCACTCCTATCAGAACCCCACCACCAGTTCCATGG...ATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATCCATGGAACTGGTGGTaGGGTTCTGATAGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDPWNWW*GSDRSE
Trigger: CTCACTCCTATCAGAACCCCACCACCAGTTCCATGG...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCTTGGCCATGGAACTaGTGGTGGGGTTCTGATAGG +
Preference number: 4 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWSWPWN*WWGSDR
Trigger: CCTATCAGAACCCCACCACCAGTTCCATGGCCAAGA...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGTGTCTCTGAGGAGCTaGGCAATCCGACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEVSLRS*AIRLCS
Trigger: AGAGCAAAGTCGGATTGCCCAGCTCCTCAGAGACAC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATGTGTCTCTGAGGAGCTaGGCAATCCGACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDVSLRS*AIRLCS
Trigger: AGAGCAAAGTCGGATTGCCCAGCTCCTCAGAGACAC...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTGAGCATTCATTCACTTaGGACAGGCTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSEHSFT*DRLPEL
Trigger: GAGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTC...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGCAGTTTGGAATCGCTaGAGCATTCATTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGAVWNR*SIHSLG
Trigger: CCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGC...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAGGGAAATACAATGCTaGGCCCCTCTTGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFREIQC*APLGGR
Trigger: TCTCCCTCCAAGAGGGGCCCAGCATTGTATTTCCCT...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCGCAACATCCCACAGCTaGCTCAAGTTCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGATSHS*LKFWPG
Trigger: TCCTGGCCAGAACTTGAGCCAGCTGTGGGATGTTGC...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGCAACATCCCACAGCTaGCTCAAGTTCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLATSHS*LKFWPG
Trigger: TCCTGGCCAGAACTTGAGCCAGCTGTGGGATGTTGC...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCTATCCAGCACACCCGTaGGTGCCCAGCACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLYPAHP*VPSTAF
Trigger: AAAGGCAGTGCTGGGCACCCACGGGTGTGCTGGATA...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTGTGAAGGGGCTCTCGTaGCCTGAAGCTGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCVKGLS*PEAVVK
Trigger: CTTTACCACAGCTTCAGGCCACGAGAGCCCCTTCAC...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGTGAAGGGGCTCTCGTaGCCTGAAGCTGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLVKGLS*PEAVVK
Trigger: CTTTACCACAGCTTCAGGCCACGAGAGCCCCTTCAC...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACTCACAGAGATGCAGTaGGCCACTGTGGTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPELTEMQ*ATVVVK
Trigger: CTTCACAACCACAGTGGCCCACTGCATCTCTGTGAG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456763.6
CDS-3UTR TCA 90 bp CTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATCTTCCACAGCCATTATaGCGAGAAACCCTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: LPLLHHPQLALQGLRRCHLPQPL*RETLWD
Trigger: GTCCCAAAGGGTTTCTCGTCATAATGGCTGTGGAAG...ATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATTGTGTTTCCGGGGATTaGACAACACAACCACACACC +
Preference number: 4 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDCVSGD*TTQPHT
Trigger: GGTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACA...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACTTTTCCTGGAACTGTTaGGGATGTGGTGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHFSWNC*GCGAVC
Trigger: ACAAACAGCACCACATCCTCAACAGTTCCAGGAAAA...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGCCCACTCTCTCCAGTaGCCAAGTACTTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLAHSLQ*PSTCHQ
Trigger: CTGATGGCAAGTACTTGGTCACTGGAGAGAGTGGGC...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAAGTGGCATTCACCTTTaGGGTCTTGCTGTCATCGAG +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPESGIHL*GLAVIE
Trigger: CTCGATGACAGCAAGACCTCAAAGGTGAATGCCACT...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR TCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACACACAAGACAGCCACTaGTTAGTAGGATCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDTQDSH*LVGSKV
Trigger: GACCTTTGATCCTACTAATCAGTGGCTGTCTTGTGT...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGTCCTCAGCTCCACCCACTTGTCCAAAAGCCTTCGATCACTGAACTCGCACAGACACAAGACAGCCACTaGTTAGTAGGATCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: GPQLHPLVQKPSITELAQTQDSH*LVGSKV
Trigger: GACCTTTGATCCTACTAATCAGTGGCTGTCTTGTGT...CTGTGCGAGTTCAGTGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR TCA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACACACAAGACAGCCACTaGTTAGTAGGATCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHTQDSH*LVGSKV
Trigger: GACCTTTGATCCTACTAATCAGTGGCTGTCTTGTGT...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTCGTGGTGTGTCCGTGTaGACTGCACTCCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLRGVSV*TALHLQ
Trigger: CTGGAGATGGAGTGCAGTTCACACGGACACACCACG...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGCCGTCCTCACCCTGTaGCCCTTTAAACAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSAVLTL*PFKQLL
Trigger: AAGAAGCTGTTTAAAGGGTCACAGGGTGAGGACGGC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCTGGCTCTTCAAGGTCTaGGGAGATGCCATCCACACT +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSWLFKV*GDAIHT
Trigger: AGTGTGGATGGCATCTCCTCAGACCTTGAAGAGCCA...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTGATACTCCGAGACTCTaGCCTCTCTGGGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLDTPRL*PLWDLH
Trigger: GTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATC...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCAGGCTGCTTTGCCTCTaGACACTGCTCCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLRLLCL*TLLPAF
Trigger: GAAAGCAGGGAGCAGTGTTCAGAGGCAAAGCAGCCT...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCGTGGTAAAGCTGCTCTaGCTTACCTGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLVVKLL*LTCSRG
Trigger: CCCTCTGCTGCAGGTAAGTCAGAGCAGCTTTACCAC...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTCTCGTCGGTTTCCTaGCTTACTCCTGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSLSSVS*LTPAQF
Trigger: AAACTGCGCAGGAGTAAGGCAGGAAACCGACGAGAG...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGCTCAGAGAAGGACACTaGTGTCACCCGACTGGACAC +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLLREGH*CHPTGH
Trigger: GTGTCCAGTCGGGTGACAGCAGTGTCCTTCTCTGAG...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATGATGTGTCGGTTGCCTaGAGTGACAAAGTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDDVSVA*SDKVAA
Trigger: TGCAGCTACTTTGTCACTGCAGGCAACCGACACATC...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGTCACCTTTGAGGTCTTaGTGTCATCGAGATACCAGA +
Preference number: 4 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGSPLRS*CHRDTR
Trigger: TCTGGTATCTCGATGACAGCAAGACCTCAAAGGTGA...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCATCCCAAACATAAATaGTATGATCGTTGTACACAC +
Preference number: 4 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPHPKHK*YDRCTH
Trigger: GTGTGTACAACGATCATAGCATTTATGTTTGGGATG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTGGGATCCAACAGGGATaGATCAGCTTTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGGIQQG*ISFVSS
Trigger: GGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCC...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTTCCCCTGATGCTAGATaGTGTCCATTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCSPDAR*CPLGLT
Trigger: TGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGA...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCTTGCCCATCACTGGCTaGAAACTTAACAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLLPITG*KLNSSD
Trigger: ATCACTGCTGTTAAGTTTGCAGCCAGTGATGGGCAA...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTGATCATGCGGACTTaGCCATCACTGGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSLIMRT*PSLAAN
Trigger: GTTTGCAGCCAGTGATGGGCAAGTCCGCATGATCAG...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTCAGACTTCTGCGCAGTaGGGAAGTAGATGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPQTSAQ*GSRCSC
Trigger: ACAAGAGCATCTACTTCCGCACTGCGCAGAAGTCTG...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGGCAAGGACGGGCAGTaGTGGAAGTTCTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSGKDGQ*WKFFFS
Trigger: ACTGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAGCCAGTGTTTCCAGCTaGCGCAGATCCAGCATGGAT +
Preference number: 4 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRIASVSS*RRSSMD
Trigger: ATCCATGCTGGATCTGCGGCAGCTGGAAACACTGGC...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCATTTCTGAGCTCCTGCTaGCTGGGTACACTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSFLSSC*LGTLFP
Trigger: TGGGAAGAGTGTACCCAGGCAGCAGGAGCTCAGAAA...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCGCACTGTCAGGGCTGTaGTTTTCTGAGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLALSGL*FSELLL
Trigger: CAGCAGGAGCTCAGAAAAGCACAGCCCTGACAGTGC...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGTGGAAAGGCAGCTGCTaGTGTAATCCACAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLWKGSC*CNPQSR
Trigger: CCTGCTCTGTGGATTACAGCAGCAGCTGCCTTTCCA...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGGGCGGGTCTGTACTTaGAACAGGAATCGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSGRVCT*NRNREE
Trigger: CTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTCCCCAACAGAGATACTaGGGGATATCTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCPQQRY*GISWPW
Trigger: CCATGGCCAAGATATCCCGCAGTATCTCTGTTGGGG...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTCCAGAACTCAGAGTTTaGGTTCCATACGCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPPELRV*VPYAVP
Trigger: TGGAACGGCGTATGGAACGCAAACTCTGAGTTCTGG...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACAACACTCAACAGCGTaGTGTGCAGGTAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSQHSTA*CAGRCV
Trigger: CACACACCTACCTGCACAGCACGCTGTTGAGTGTTG...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCCAACACTCAACAGCGTaGTGTGCAGGTAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGQHSTA*CAGRCV
Trigger: CACACACCTACCTGCACAGCACGCTGTTGAGTGTTG...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCTTATCCCCTCACCTCTaGCACTTACCTGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFLSPHL*HLPVPS
Trigger: AGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAA...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCTTCTTTATAAGCCTCTaGCTATGGCGCAGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSFFISL*LWRSRA
Trigger: CGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAA...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR GCA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCGGAAGCGCCGCGACCTaGACAAAGTATAAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: RLLTKHHSGCREKVASGLGSAAT*TKYKSY
Trigger: ATAACTTTTATACTTTGTGCAGGTCGCGGCGCTTCC...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGGCGCAGTTTGATGGATaGAGATCTCAACAGATTCTT +
Preference number: 4 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQAQFDG*RSQQIL
Trigger: AAGAATCTGTTGAGATCTCCATCCATCAAACTGCGC...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTAGAATCTCAGAGTCATaGGCCTCCACCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPRISES*ASTFSI
Trigger: GATGCTGAAGGTGGAGGCCCATGACTCTGAGATTCT...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACTTTCAGACCTGTGTCTaGCTTAGAATACTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDFQTCV*LRILQA
Trigger: TGCCTGGAGTATTCTAAGCCAGACACAGGTCTGAAA...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGTTTCAGACCTGTGTCTaGCTTAGAATACTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RTHFFISLCLWRSRAGEGFQTCV*LRILQA
Trigger: TGCCTGGAGTATTCTAAGCCAGACACAGGTCTGAAA...CCCTTCACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCCCGTGTACTTCCAGCTaGGCTCCACATCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGPCTSS*APHPCH
Trigger: ATGACATGGATGTGGAGCCCAGCTGGAAGTACACGG...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACGAATATTTCGGTCCTaGCAGCCGATAGCCGTGTAC +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSRIFRS*QPIAVY
Trigger: GTACACGGCTATCGGCTGCCAGGACCGAAATATTCG...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCCGAATATTTCGGTCCTaGCAGCCGATAGCCGTGTAC +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGRIFRS*QPIAVY
Trigger: GTACACGGCTATCGGCTGCCAGGACCGAAATATTCG...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTGTCAGAACAGCTGGTaGCAATGTAGATCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPCQNSW*QCRSLR
Trigger: CCTCAGGGATCTACATTGCCACCAGCTGTTCTGACA...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCTCTTCTTCTGGGTCCTaGGTTGGCTGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFSSSGS*VGCRSW
Trigger: CCAGCTCCTGCAGCCAACCCAGGACCCAGAAGAAGA...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGACAATACCATCTTCAATaGGTGCAGGTTCCAGATCTT +
Preference number: 4 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGQYHLQ*VQVPDL
Trigger: AAGATCTGGAACCTGCACCCATTGAAGATGGTATTG...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCAATACCATCTTCAATaGGTGCAGGTTCCAGATCTT +
Preference number: 4 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSQYHLQ*VQVPDL
Trigger: AAGATCTGGAACCTGCACCCATTGAAGATGGTATTG...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGCACTTGGAACTCACTaGTATCCATGGTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFALGTH*YPWWGC
Trigger: ACAACCCCACCATGGATACCAGTGAGTTCCAAGTGC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTGCTGGAGCCTGCACTTaGAACTCACTGGTATCCATG +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCAGACT*NSLVSM
Trigger: CATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGC...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGCAGAGTTCCCCGGGCTaGAGCCTGCACTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWQSSPG*SLHLEL
Trigger: GAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTG...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTTTTAGAAACTGCTCCTaGTCTGGAGTCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCFRNCS*SGVWGL
Trigger: CAGCCCCCAGACTCCAGACCAGGAGCAGTTTCTAAA...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGGTGCTCCAGGGGGATTaGCACCATTGCCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWVLQGD*HHCLSA
Trigger: AGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGCAC...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCAGACTGTGCACAGACTaGGCCTTCTGGAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGRLCTD*AFWSPE
Trigger: TTCTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCT...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCATCTTGGCCATGGAACTaGTGGTGGGGTTCTGATAGG +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSSWPWN*WWGSDR
Trigger: CCTATCAGAACCCCACCACCAGTTCCATGGCCAAGA...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACGAGCATTCATTCACTTaGGACAGGCTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: GRVCTCNRNREEILRDSDEHSFT*DRLPEL
Trigger: GAGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTC...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTAGAGGGGCTGCAGTTTaGAATCGCTGGAGCATTCAT +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPRGAAV*NRWSIH
Trigger: ATGAATGCTCCAGCGATTCCAAACTGCAGCCCCTCT...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTTGCAGTAATTTCAAATaGCTTCTAAGAGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSCSNFK*LLREGQ
Trigger: CTGGCCCTCTCTTAGAAGCCATTTGAAATTACTGCA...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGAGGGAAATACAATGCTaGGCCCCTCTTGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLREIQC*APLGGR
Trigger: TCTCCCTCCAAGAGGGGCCCAGCATTGTATTTCCCT...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACGTATCAGCTAGGCTGTaGACACCAAGAATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDVSARL*TPRIQN
Trigger: ATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATAC...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTAAACCAGGTGTCCTATaGGCTATCTCGTATCAGCTA +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSKPGVL*AISYQL
Trigger: TAGCTGATACGAGATAGCCCATAGGACACCTGGTTT...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTAAACCAGGTGTCCTATaGGCTATCTCGTATCAGCTA +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGKPGVL*AISYQL
Trigger: TAGCTGATACGAGATAGCCCATAGGACACCTGGTTT...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTACTCCTGCGCAGTTTaGTGGATGGAGATCTCAACA +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPYSCAV*WMEIST
Trigger: TGTTGAGATCTCCATCCATCAAACTGCGCAGGAGTA...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCATGTGTTTCCGGGGATTaGACAACACAACCACACACC +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSCVSGD*TTQPHT
Trigger: GGTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACA...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCCGAGATACCAGAATTTaGTGTGTCGGTTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSRDTRI*CVGCLQ
Trigger: CTGCAGGCAACCGACACATCAAATTCTGGTATCTCG...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGCACAGGCCACATCAGTaGATAGGTTGTTCCGTAGCT +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLHRPHQ*IGCSVA
Trigger: AGCTACGGAACAACCTATTCACTGATGTGGCCTGTG...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTGCGGATGGTGTTGTCTaGGGAGCAGGTAATAAAGGA +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGADGVV*GAGNKG
Trigger: TCCTTTATTACCTGCTCCTCAGACAACACCATCCGC...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAATCTCACTCAGGGACTaGAGTTCGTGCACCCTAAGT +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSISLRD*SSCTLS
Trigger: ACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGAT...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCATCTCACTCAGGGACTaGAGTTCGTGCACCCTAAGT +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSISLRD*SSCTLS
Trigger: ACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGAT...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTGGCAATGTAGATCCCTaGGGGGTCTGTCTGCACCTT +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLGNVDP*GVCLHL
Trigger: AAGGTGCAGACAGACCCCTCAGGGATCTACATTGCC...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTGGCCACGCACTCGCCTaGGGAGAAGTCAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLGHALA*GEVKNG
Trigger: TCCATTTTTGACTTCTCCTCAGGCGAGTGCGTGGCC...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGATTCTGGCTAGTGAGTaGAGTCTCAAGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLILASE*SLKGLL
Trigger: CAGGAGGCCCTTGAGACTTCACTCACTAGCCAGAAT...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCCTCACAGCACCAAGATaGCAAAGACCCAAGACCTGT +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSLTAPR*QRPKTC
Trigger: ACAGGTCTTGGGTCTTTGTCATCTTGGTGCTGTGAG...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTGTTGAGGATGTGGTaGTGTTTGTGTTTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSLLRMW*CLCFRG
Trigger: TCCCCGGAAACACAAACAGCACCACATCCTCAACAG...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCGATGTGTCGGTTGCCTaGAGTGACAAAGTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSDVSVA*SDKVAA
Trigger: TGCAGCTACTTTGTCACTGCAGGCAACCGACACATC...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTGATGTGTCGGTTGCCTaGAGTGACAAAGTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCDVSVA*SDKVAA
Trigger: TGCAGCTACTTTGTCACTGCAGGCAACCGACACATC...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGCTTGGCTCACAGAGATaGAGTGGGCCACTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWLGSQR*SGPLWS
Trigger: GGACCACAGTGGCCCACTGCATCTCTGTGAGCCAAG...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCTTGCCCATCACTGGCTaGAAACTTAACAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: CNRNREEILRDSDLSGTCLPITG*KLNSSD
Trigger: ATCACTGCTGTTAAGTTTGCAGCCAGTGATGGGCAA...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp ATACGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGTTAAACAGCTTCTTCTaGTTTCCACTGCTGATGTTA +
Preference number: 4 (lower is better)
Translates to: IRSPDARCCPLGLTHTERLNSFF*FPLLML
Trigger: TAACATCAGCAGTGGAAAGCAGAAGAAGCTGTTTAA...CCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTAACTCGGCCAGACGCTaGCTCATGCTGATGGTCATC +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLNSARR*LMLMVI
Trigger: GATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTT...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATATTTCTGAGCTCCTGCTaGCTGGGTACACTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRIFLSSC*LGTLFP
Trigger: TGGGAAGAGTGTACCCAGGCAGCAGGAGCTCAGAAA...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTGGCTGGAAAGGCAGCTaGTGCTGTAATCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLGWKGS*CCNPQS
Trigger: GCTCTGTGGATTACAGCAGCAGCTGCCTTTCCAGCC...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCAACAGTTCTGAGTATTaGTCCAGCAGGGCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGNSSEY*SSRACV
Trigger: GACACAGGCCCTGCTGGAGCAATACTCAGAACTGTT...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTCAGGGAGCTAATCCCTaGAGTAATTTCAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGQGANP*SNFKWL
Trigger: AAGCCATTTGAAATTACTGCAGGGATTAGCTCCCTG...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTCAGGGAGCTAATCCCTaGAGTAATTTCAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSQGANP*SNFKWL
Trigger: AAGCCATTTGAAATTACTGCAGGGATTAGCTCCCTG...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCAAGCATCATTCAGGATaGAGGGAGAAGGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSKHHSG*REKVAS
Trigger: AGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTT...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGTTATCCCCTCACCTCTaGCACTTACCTGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLLSPHL*HLPVPS
Trigger: AGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAA...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACGCGCAGTTTGATGGATaGAGATCTCAACAGATTCTT +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDAQFDG*RSQQIL
Trigger: AAGAATCTGTTGAGATCTCCATCCATCAAACTGCGC...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTCAAAGGTCAAGGCAATaGTGTCTGGATACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPQRSRQ*CLDTWH
Trigger: ATGCCAGGTATCCAGACACCATTGCCTTGACCTTTG...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTAGAATCTCAGAGTCATaGGCCTCCACCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGRISES*ASTFSI
Trigger: GATGCTGAAGGTGGAGGCCCATGACTCTGAGATTCT...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATACGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGAGGAGAAGTCAAAAATaGAGAGATTCTTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: IRSPDARCCPLGLTHTERRRSQK*RDSCQN
Trigger: GTTCTGACAAGAATCTCTCCATTTTTGACTTCTCCT...CCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCGCAGGTTCCAGATCTTaGGCAAAGACCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLAGSRS*AKTPSS
Trigger: AGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CGTTCCATACGCCGTTCCACGGCTCGAAGCAACAGTTCTGAGTATTGCTCCAGCCAATACCATCTTCAATaGGTGCAGGTTCCAGATCTT +
Preference number: 4 (lower is better)
Translates to: RSIRRSTARSNSSEYCSSQYHLQ*VQVPDL
Trigger: AAGATCTGGAACCTGCACCCATTGAAGATGGTATTG...GCTGGAGCAATACTCAGAACTGTTGCTTCGAGCCGTGGAACGGCGTATGGAACG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCTCTCAGAGTCTTCAGTaGGGTGCTCCGGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFSQSLQ*GAPGWK
Trigger: TTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGA...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTCATGTCTTTCCTGTaGCACCAGACTGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSLMSFL*HQTVHR
Trigger: TCTGTGCACAGTCTGGTGCCACAGGAAAGACATGAG...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTCTCATGTCTTTCCTGTaGCACCAGACTGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGLMSFL*HQTVHR
Trigger: TCTGTGCACAGTCTGGTGCCACAGGAAAGACATGAG...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACTGCAGTAATTTCAAATaGCTTCTAAGAGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDCSNFK*LLREGQ
Trigger: CTGGCCCTCTCTTAGAAGCCATTTGAAATTACTGCA...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGTCGGTTGCCTGCAGTaGCAAAGTAGCTGCAATCCT +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFVGCLQ*QSSCNP
Trigger: AGGATTGCAGCTACTTTGTCACTGCAGGCAACCGAC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTATTCTGGCTAGTGAGTaGAGTCTCAAGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLILASE*SLKGLL
Trigger: CAGGAGGCCCTTGAGACTTCACTCACTAGCCAGAAT...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCTCGAAGCAACAGTTCTaGGTATTGCTCCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFSKQQF*VLLQQG
Trigger: GCCCTGCTGGAGCAATACTCAGAACTGTTGCTTCGA...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATACTGTTGAGGATGTGGTaGTGTTTGTGTTTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRILLRMW*CLCFRG
Trigger: TCCCCGGAAACACAAACAGCACCACATCCTCAACAG...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTCATCCCAAACATAAATaGTATGATCGTTGTACACAC +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSHPKHK*YDRCTH
Trigger: GTGTGTACAACGATCATAGCATTTATGTTTGGGATG...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCTGTGTCCGTGTGAACTaGACTCCATCTCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLCVRVN*TPSPDF
Trigger: GAAGTCTGGAGATGGAGTGCAGTTCACACGGACACA...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTTTAAACAGCTTCTTCTaGTTTCCACTGCTGATGTTA +
Preference number: 4 (lower is better)
Translates to: STPEYPVYAPPQGANPCSLNSFF*FPLLML
Trigger: TAACATCAGCAGTGGAAAGCAGAAGAAGCTGTTTAA...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCTGGAAAGGCAGCTGCTaGTGTAATCCACAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFWKGSC*CNPQSR
Trigger: CCTGCTCTGTGGATTACAGCAGCAGCTGCCTTTCCA...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATGCCAGAGTCTCAAAGTaGTGTTTTAGAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDARVSK*CFRNCS
Trigger: GGAGCAGTTTCTAAAACAGCACTTTGAGACTCTGGC...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR GCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTGGGCAATCCGACTTTaGTCTGCTGAGGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLWAIRL*SAEGIL
Trigger: CAAGATGCCCTCAGCAGAGCAAAGTCGGATTGCCCA...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGGAAGCGCCGCGACCTaGACAAAGTATAAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFGSAAT*TKYKSY
Trigger: ATAACTTTTATACTTTGTGCAGGTCGCGGCGCTTCC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGAACTGTTGAGGATGTaGTGCTGTTTGTGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSELLRM*CCLCFR
Trigger: CCGGAAACACAAACAGCACCACATCCTCAACAGTTC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGACTGGACACCTTGTTaGAGGCCACCACAATGTTTT +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSDWTPC*RPPQCF
Trigger: AAAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCAGACCTGTGTCTaGCTTAGAATACTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPFQTCV*LRILQA
Trigger: TGCCTGGAGTATTCTAAGCCAGACACAGGTCTGAAA...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGCACTTGGAACTCACTaGTATCCATGGTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLALGTH*YPWWGC
Trigger: ACAACCCCACCATGGATACCAGTGAGTTCCAAGTGC...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATACTCATGTCTTTCCTGTaGCACCAGACTGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRILMSFL*HQTVHR
Trigger: TCTGTGCACAGTCTGGTGCCACAGGAAAGACATGAG...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTGTGTCTCTGAGGAGCTaGGCAATCCGACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLVSLRS*AIRLCS
Trigger: AGAGCAAAGTCGGATTGCCCAGCTCCTCAGAGACAC...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGAGCATTCATTCACTTaGGACAGGCTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSEHSFT*DRLPEL
Trigger: GAGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCCTGAGCTCCAGGTATTaGGGAAAACCACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFLSSRY*GKPPCS
Trigger: AGAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAG...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTCTGAGCTCCAGGTATTaGGGAAAACCACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLLSSRY*GKPPCS
Trigger: AGAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAG...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTAGGGAAATACAATGCTaGGCCCCTCTTGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLREIQC*APLGGR
Trigger: TCTCCCTCCAAGAGGGGCCCAGCATTGTATTTCCCT...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGTTTTCCTGGAACTGTTaGGGATGTGGTGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLFSWNC*GCGAVC
Trigger: ACAAACAGCACCACATCCTCAACAGTTCCAGGAAAA...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCAGTGGCATTCACCTTTaGGGTCTTGCTGTCATCGAG +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFSGIHL*GLAVIE
Trigger: CTCGATGACAGCAAGACCTCAAAGGTGAATGCCACT...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CTTGCCCACTTTCTTGGGGTCCCTCACATCCCAAACATAAATGCTATGATCGTTATCTCACTCAGGGACTaGAGTTCGTGCACCCTAAGT +
Preference number: 4 (lower is better)
Translates to: LAHFLGVPHIPNINAMIVISLRD*SSCTLS
Trigger: ACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGAT...AACGATCATAGCATTTATGTTTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR TCA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTCCCCAGACACAGAGATaGGATGTTTACAATCATTAC +
Preference number: 4 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPPQTQR*DVYNHY
Trigger: GTAATGATTGTAAACATCTCATCTCTGTGTCTGGGG...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATCCCCAGACACAGAGATaGGATGTTTACAATCATTAC +
Preference number: 4 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDPQTQR*DVYNHY
Trigger: GTAATGATTGTAAACATCTCATCTCTGTGTCTGGGG...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCCTCACAGCACCAAGATaGCAAAGACCCAAGACCTGT +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFLTAPR*QRPKTC
Trigger: ACAGGTCTTGGGTCTTTGTCATCTTGGTGCTGTGAG...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCCAACACAGGCTTCTaGCTAAGCATCATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGSNTGF*LSIIQD
Trigger: ATCCTGAATGATGCTTAGTCAGAAGCCTGTGTTGGA...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTTCCAACACAGGCTTCTaGCTAAGCATCATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCSNTGF*LSIIQD
Trigger: ATCCTGAATGATGCTTAGTCAGAAGCCTGTGTTGGA...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTTGCCCATCACTGGCTaGAAACTTAACAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGLPITG*KLNSSD
Trigger: ATCACTGCTGTTAAGTTTGCAGCCAGTGATGGGCAA...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTGCCAGAGTCTCAAAGTaGTGTTTTAGAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGARVSK*CFRNCS
Trigger: GGAGCAGTTTCTAAAACAGCACTTTGAGACTCTGGC...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCGAACTGTTGAGGATGTaGTGCTGTTTGTGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLELLRM*CCLCFR
Trigger: CCGGAAACACAAACAGCACCACATCCTCAACAGTTC...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGACTGGACACCTTGTTaGAGGCCACCACAATGTTTT +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLDWTPC*RPPQCF
Trigger: AAAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTC...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTGTCAGAACAGCTGGTaGCAATGTAGATCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLCQNSW*QCRSLR
Trigger: CCTCAGGGATCTACATTGCCACCAGCTGTTCTGACA...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTAGGAGAAGTCAAAAATaGAGAGATTCTTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: QQPARYSSNQHSTACCAGRRSQK*RDSCQN
Trigger: GTTCTGACAAGAATCTCTCCATTTTTGACTTCTCCT...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTAGGAGAAGTCAAAAATaGAGAGATTCTTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSRRSQK*RDSCQN
Trigger: GTTCTGACAAGAATCTCTCCATTTTTGACTTCTCCT...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGGGGCTTTTCATTCTaGCTAGTGAGTGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLGGFSF*LVSEVS
Trigger: TGAGACTTCACTCACTAGCCAGAATGAAAAGCCCCC...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGAGCATTCATTCACTTaGGACAGGCTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLEHSFT*DRLPEL
Trigger: GAGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTC...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGTATCAGCTAGGCTGTaGACACCAAGAATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSVSARL*TPRIQN
Trigger: ATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATAC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCAAACCAGGTGTCCTATaGGCTATCTCGTATCAGCTA +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGKPGVL*AISYQL
Trigger: TAGCTGATACGAGATAGCCCATAGGACACCTGGTTT...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCTACTCCTGCGCAGTTTaGTGGATGGAGATCTCAACA +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFYSCAV*WMEIST
Trigger: TGTTGAGATCTCCATCCATCAAACTGCGCAGGAGTA...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTCCCCAGACACAGAGATaGGATGTTTACAATCATTAC +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCPQTQR*DVYNHY
Trigger: GTAATGATTGTAAACATCTCATCTCTGTGTCTGGGG...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATATTGCCCATCACTGGCTaGAAACTTAACAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRILPITG*KLNSSD
Trigger: ATCACTGCTGTTAAGTTTGCAGCCAGTGATGGGCAA...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTCAATACCATCTTCAATaGGTGCAGGTTCCAGATCTT +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCQYHLQ*VQVPDL
Trigger: AAGATCTGGAACCTGCACCCATTGAAGATGGTATTG...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTTGCAGTAATTTCAAATaGCTTCTAAGAGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCCSNFK*LLREGQ
Trigger: CTGGCCCTCTCTTAGAAGCCATTTGAAATTACTGCA...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCCAAGAATCCAGAATCTaGGTTCACTTAGTGTACTGC +
Preference number: 4 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSQESRI*VHLVYC
Trigger: GCAGTACACTAAGTGAACCCAGATTCTGGATTCTTG...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTCAAGAATCCAGAATCTaGGTTCACTTAGTGTACTGC +
Preference number: 4 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCQESRI*VHLVYC
Trigger: GCAGTACACTAAGTGAACCCAGATTCTGGATTCTTG...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCCAAGAATCCAGAATCTaGGTTCACTTAGTGTACTGC +
Preference number: 4 (lower is better)
Translates to: TLCMLHHRELIPAVISNGQESRI*VHLVYC
Trigger: GCAGTACACTAAGTGAACCCAGATTCTGGATTCTTG...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAACATCCCAAACATAAATaGTATGATCGTTGTACACAC +
Preference number: 4 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEHPKHK*YDRCTH
Trigger: GTGTGTACAACGATCATAGCATTTATGTTTGGGATG...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000514566.5
CDS-3UTR GCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGCCAGAGTCTCAAAGTaGTGTTTTAGAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFARVSK*CFRNCS
Trigger: GGAGCAGTTTCTAAAACAGCACTTTGAGACTCTGGC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCGCGCAGTTTGATGGATaGAGATCTCAACAGATTCTT +
Preference number: 4 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLAQFDG*RSQQIL
Trigger: AAGAATCTGTTGAGATCTCCATCCATCAAACTGCGC...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGCGCAGTTTGATGGATaGAGATCTCAACAGATTCTT +
Preference number: 4 (lower is better)
Translates to: SVLATGIVKRYSETLTSLAQFDG*RSQQIL
Trigger: AAGAATCTGTTGAGATCTCCATCCATCAAACTGCGC...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGTATCAGCTAGGCTGTaGACACCAAGAATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFVSARL*TPRIQN
Trigger: ATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATAC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR TCA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGTTTTCCTGGAACTGTTaGGGATGTGGTGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWFSWNC*GCGAVC
Trigger: ACAAACAGCACCACATCCTCAACAGTTCCAGGAAAA...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR TCA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCCCCCAGACACAGAGATaGGATGTTTACAATCATTAC +
Preference number: 4 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFPQTQR*DVYNHY
Trigger: GTAATGATTGTAAACATCTCATCTCTGTGTCTGGGG...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCATTAAACAGCTTCTTCTaGTTTCCACTGCTGATGTTA +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSLNSFF*FPLLML
Trigger: TAACATCAGCAGTGGAAAGCAGAAGAAGCTGTTTAA...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTCAGGGAGCTAATCCCTaGAGTAATTTCAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: YILTYPLTSATYLSHLPLQGANP*SNFKWL
Trigger: AAGCCATTTGAAATTACTGCAGGGATTAGCTCCCTG...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CCA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAAGGAGAAGTCAAAAATaGAGAGATTCTTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSRRSQK*RDSCQN
Trigger: GTTCTGACAAGAATCTCTCCATTTTTGACTTCTCCT...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR GCA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATATTAAACAGCTTCTTCTaGTTTCCACTGCTGATGTTA +
Preference number: 4 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRILNSFF*FPLLML
Trigger: TAACATCAGCAGTGGAAAGCAGAAGAAGCTGTTTAA...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS CCA 90 bp TCCAAGGGAGGAGGCCGCCGAGACCACCAGGGATTTCCGCAGGCCTaGACACCTGCGCTAGCGCCGGCGGGGACGCGGCGGGGCTCGCCG +
Preference number: 5 (lower is better)
Translates to: SKGGGRRDHQGFPQA*TPALAPAGTRRGSP
Trigger: CGGCGAGCCCCGCCGCGTCCCCGCCGGCGCTAGCGCAGGTGTCCAGGCCTGCGGAAATCCCTGGTGGTCTCGGCGGCCTCCTCCCTTGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510535.1
CDS-3UTR CAA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGACTGGGCAGGGCCAGCTaGCTGAGTGGTGAGACTCGG +
Preference number: 5 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRLGRAS*LSGETR
Trigger: CCGAGTCTCACCACTCAGCAAGCTGGCCCTGCCCAG...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGACACTCTGTCCTAGGCTaGGGAGTGGTGCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRHSVLG*GVVPSP
Trigger: GGGGGAGGGCACCACTCCCAAGCCTAGGACAGAGTG...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS GCA 90 bp GCCTGGCGCACGCTGCCGCGGAGCTCTGCCACCAGCTGCTCACACTaGTCCAGGCTCACCGCTGGCTCAGATGCCTGTGGCACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: AWRTLPRSSATSCSH*SRLTAGSDACGTWA
Trigger: AGCCCAGGTGCCACAGGCATCTGAGCCAGCGGTGAGCCTGGAGCAGTGTGAGCAGCTGGTGGCAGAGCTCCGCGGCAGCGTGCGCCAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514566.5
CDS-3UTR CAA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGAGGGGGATTGGCACCATaGCCTCTCGGCTGCTCACCA +
Preference number: 5 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRGGLAP*PLGCSP
Trigger: TGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCC...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGAGATGGGGGCATGAGCTaGAGGTTCAGCCACCAGGCC +
Preference number: 5 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRDGGMS*RFSHQA
Trigger: GGCCTGGTGGCTGAACCTCAAGCTCATGCCCCCATC...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp GTTGCCGGTGGCCTCAGACATGCAGAAGGGGACGGGGCGCCGGCCGGGCCACGACAGCTGCTGTCAGGGTaGAGACGGCATCGTGGCAAC +
Preference number: 5 (lower is better)
Translates to: VAGGLRHAEGDGAPAGPRQLLSG*RRHRGN
Trigger: GTTGCCACGATGCCGTCTCAACCCTGACAGCAGCTG...TCGTGGCCCGGCCGGCGCCCCGTCCCCTTCTGCATGTCTGAGGCCACCGGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGGGGCCTGGTGCCGGTaGGGTCCAGAAGCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVGAWCR*GPEALW
Trigger: CCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGGGATAGGAACAAGGTaGGGAAGCCTGAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGGIGTR*GSLRPR
Trigger: CCTCGGCCTCAGGCTTCCCAACCTTGTTCCTATCCC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp CAGCTCGGCCACCTGGCTGTGCTCTGCCACGTCCCAAACCCGCACGGCAGGCATGGGGGATTGGCACCATaGCCTCTCGGCTGCTCACCA +
Preference number: 5 (lower is better)
Translates to: QLGHLAVLCHVPNPHGRHGGLAP*PLGCSP
Trigger: TGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCC...ATGCCTGCCGTGCGGGTTTGGGACGTGGCAGAGCACAGCCAGGTGGCCGAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR CAA 90 bp AGGGCGAACCTGAGTCCCACCTGCGGTGGGCGCGGCTGGTGTGGGAAGTCGGGGGTGCATTCCATGGGGTaGGGAGTCTTCTCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: RANLSPTCGGRGWCGKSGVHSMG*GVFSGG
Trigger: ACCCCCTGAGAAGACTCCCAACCCCATGGAATGCAC...CCCCGACTTCCCACACCAGCCGCGCCCACCGCAGGTGGGACTCAGGTTCGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS CCA 90 bp AATGCAGAGAGAGGCCCAAGTGGGGCAGAGTCTCCTGGGTTGGGCTaGGCAGGCCCTGCCAGGGGCCTTGGTGGCTACTCCCAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: NAERGPSGAESPGLG*AGPARGLGGYSQLQ
Trigger: CTGAAGCTGGGAGTAGCCACCAAGGCCCCTGGCAGGGCCTGCCCAGCCCAACCCAGGAGACTCTGCCCCACTTGGGCCTCTCTCTGCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502292.5
ENST00000505061.5
CDS-3UTR CAA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGCAAGCCACACCATACTaGTGCTCCTGCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMQATPY*CSCSSA
Trigger: GGCCGAGCTGCAGGAGCACAAGTATGGTGTGGCTTG...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCCTGGGCAGGGCCAGCTaGCTGAGTGGTGAGACTCGG +
Preference number: 5 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVLGRAS*LSGETR
Trigger: CCGAGTCTCACCACTCAGCAAGCTGGCCCTGCCCAG...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATGCCCAGTCCTGGGTCTaGTCTCAACAGCGGCACTGT +
Preference number: 5 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHAQSWV*SQQRHC
Trigger: ACAGTGCCGCTGTTGAGACAAGACCCAGGACTGGGC...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGAGAGCCGAGTACACCTaGCCCACTTTCTTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMRAEYT*PTFLGS
Trigger: GGACCCCAAGAAAGTGGGCAAGGTGTACTCGGCTCT...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp ATTGATGGGGCCTGGTGCCGGTTGGGTCCAGAAGCCCTTTGGGGAGAGGATGGTGGGAGAGGATGGTCCTaGCTGCTTGCCGCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: IDGAWCRLGPEALWGEDGGRGWS*LLAAPL
Trigger: CAGCGGGGCGGCAAGCAGCAAGGACCATCCTCTCCC...ACCATCCTCTCCCCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCCATCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CACACACCGAGCGGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTGGGAGAGGATGGTCCTaGCTGCTTGCCGCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: HTPSGCPRGDPTGMHQLCGRGWS*LLAAPL
Trigger: CAGCGGGGCGGCAAGCAGCAAGGACCATCCTCTCCC...ACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CAGCTCGGCCACCTGGCTGTGCTCTGCCACGTCCCAAACCCGCACGGCAGGCATGCCTTCTTGGTACTCTaGGCAAGGACGGGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: QLGHLAVLCHVPNPHGRHAFLVL*ARTGSA
Trigger: AGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGC...ATGCCTGCCGTGCGGGTTTGGGACGTGGCAGAGCACAGCCAGGTGGCCGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR CAA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCGCTGTGGCCACTCTCTaGGGAGCCCAGCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: SPETAVRLVKGPADWPHVAVATL*GAQLLS
Trigger: TGACAGCAGCTGGGCTCCCAAGAGAGTGGCCACAGC...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCGATGGGGGCATGAGCTaGAGGTTCAGCCACCAGGCC +
Preference number: 5 (lower is better)
Translates to: SPETAVRLVKGPADWPHVDGGMS*RFSHQA
Trigger: GGCCTGGTGGCTGAACCTCAAGCTCATGCCCCCATC...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCCGGTCAGGCAGTGGTTaGGGGATGTCCAGGACCAGG +
Preference number: 5 (lower is better)
Translates to: SPETAVRLVKGPADWPHVRSGSG*GMSRTR
Trigger: CCTGGTCCTGGACATCCCCAAACCACTGCCTGACCG...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCCGGTCAGGCAGTGGTTaGGGGATGTCCAGGACCAGG +
Preference number: 5 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVRSGSG*GMSRTR
Trigger: CCTGGTCCTGGACATCCCCAAACCACTGCCTGACCG...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCCCAGGGGCCCGGCCTTaGGTGACAGGAGAGAATGCA +
Preference number: 5 (lower is better)
Translates to: SPETAVRLVKGPADWPHVPGARP*VTGENA
Trigger: TGCATTCTCTCCTGTCACCAAAGGCCGGGCCCCTGG...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTGCTGCAGGGCTGCCCCTGGCTaGGTGCATTCCATGGGGTTG +
Preference number: 5 (lower is better)
Translates to: PCSQSLQWGAPGWKGSCCRAAPG*VHSMGL
Trigger: CAACCCCATGGAATGCACCAAGCCAGGGGCAGCCCT...GCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCGCCCAGTCCTGGGTCTaGTCTCAACAGCGGCACTGT +
Preference number: 5 (lower is better)
Translates to: APLPLGCSPDACGTWAGLAQSWV*SQQRHC
Trigger: ACAGTGCCGCTGTTGAGACAAGACCCAGGACTGGGC...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATGCCTTCTTGGTACTCTaGGCAAGGACGGGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHAFLVL*ARTGSA
Trigger: AGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGC...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCGATGGGGGCATGAGCTaGAGGTTCAGCCACCAGGCC +
Preference number: 5 (lower is better)
Translates to: MREPVQETALMGPGAGWVDGGMS*RFSHQA
Trigger: GGCCTGGTGGCTGAACCTCAAGCTCATGCCCCCATC...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCTGGGCAGGGCCAGCTaGCTGAGTGGTGAGACTCGG +
Preference number: 5 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPLGRAS*LSGETR
Trigger: CCGAGTCTCACCACTCAGCAAGCTGGCCCTGCCCAG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGGCTGCTGACTGGCAGTaGCTGGGCACAGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVAADWQ*LGTGAA
Trigger: AGCAGCCCCTGTGCCCAGCAACTGCCAGTCAGCAGC...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGGCTTTGTCACCTAGGTaGGAGTGCAATGGCGCGATC +
Preference number: 5 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMALSPR*ECNGAI
Trigger: GATCGCGCCATTGCACTCCAACCTAGGTGACAAAGC...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS GCA 90 bp GACAGCAGGCCTAGGACCGCAGCTCTCTGCGGAGGCCAGGACACCTaGCCTCTTTACAGTACTGCCAGCCCTCTTCCTCACTCACCTCTC +
Preference number: 5 (lower is better)
Translates to: DSRPRTAALCGGQDT*PLYSTASPLPHSPL
Trigger: GAGAGGTGAGTGAGGAAGAGGGCTGGCAGTACTGTAAAGAGGGCAGGTGTCCTGGCCTCCGCAGAGAGCTGCGGTCCTAGGCCTGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507147.1
CDS GCA 90 bp CCACTGTGGTCTGTGGGCAGAGTGGCTCAGCTCAGCAAGGCCACCTaGCCACTCAGTCTTCTCTCCTCCCCACCCATCAACAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: PLWSVGRVAQLSKAT*PLSLLSSPPINSHL
Trigger: CAGGTGGCTGTTGATGGGTGGGGAGGAGAGAAGACTGAGTGGGCAGGTGGCCTTGCTGAGCTGAGCCACTCTGCCCACAGACCACAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502292.5
CDS CCA 90 bp ATGCCAGGCCCACGCCCGCCAGAGGCGTTTAACTGGCGAGATGGATaGGATGGGCCCCAGTTGGTCTCGTGGACGATCTGGTTCCCGTTA +
Preference number: 5 (lower is better)
Translates to: MPGPRPPEAFNWRDG*DGPQLVSWTIWFPL
Trigger: TAACGGGAACCAGATCGTCCACGAGACCAACTGGGGCCCATCCCATCCATCTCGCCAGTTAAACGCCTCTGGCGGGCGTGGGCCTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510535.1
CDS-3UTR CAA 90 bp CCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTGCTGCGCTAGATGCTGTCCATaGGGGCTGACACACACCGAG +
Preference number: 5 (lower is better)
Translates to: PCSQSLQWGAPGWKGSCCARCCP*GLTHTE
Trigger: CTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGC...GCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGGGGAGAGGATGGTCCTaGCTGCTTGCCGCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEGRGWS*LLAAPL
Trigger: CAGCGGGGCGGCAAGCAGCAAGGACCATCCTCTCCC...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CAA 90 bp CCGTGCTCTCAGAGTCTTCAGTGGGGTGCTCCGGGCTGGAAAGGCAGCTGCTGCGAGGCCAGTGCCTTCTaGGTACTCTTGGCAAGGACG +
Preference number: 5 (lower is better)
Translates to: PCSQSLQWGAPGWKGSCCEASAF*VLLART
Trigger: CGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCTC...GCAGCAGCTGCCTTTCCAGCCCGGAGCACCCCACTGAAGACTCTGAGAGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATGGCTGGAGCCTGCACTaGGAACTCACTGGTATCCAT +
Preference number: 5 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHGWSLH*ELTGIH
Trigger: ATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCC...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp ATACGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGCACTCTGTCCTAGGCTaGGGAGTGGTGCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: IRSPDARCCPLGLTHTERHSVLG*GVVPSP
Trigger: GGGGGAGGGCACCACTCCCAAGCCTAGGACAGAGTG...CCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGCAAGTTTTCAGGGCCTaGGAAGAGGCTGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVQVFRA*EEAADW
Trigger: CCAGTCAGCAGCCTCTTCCAAGGCCCTGAAAACTTG...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp GGTTGCCAGAGGACGGTTCCACCTCCGGGGGTGCTCCAGGGGGATTGGCACCATCAAGTTTTCAGGGCCTaGGAAGAGGCTGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: GCQRTVPPPGVLQGDWHHQVFRA*EEAADW
Trigger: CCAGTCAGCAGCCTCTTCCAAGGCCCTGAAAACTTG...ATGGTGCCAATCCCCCTGGAGCACCCCCGGAGGTGGAACCGTCCTCTGGCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGATGACGAGAAACCCTTaGGGACAGTCCCCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGMTRNP*GQSPAQ
Trigger: CTGGGCCGGGGACTGTCCCAAAGGGTTTCTCGTCAT...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTTCTCCAAGGTCACCTaGGAGCTGAGGTCCTCTCGT +
Preference number: 5 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVFSKVT*ELRSSR
Trigger: ACGAGAGGACCTCAGCTCCAAGGTGACCTTGGAGAA...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512970.5
CDS-3UTR CAA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGACAAGCCACACCATACTaGTGCTCCTGCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRQATPY*CSCSSA
Trigger: GGCCGAGCTGCAGGAGCACAAGTATGGTGTGGCTTG...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGCGACTGGACACCTTGTaGGAGGCCACCACAATGTTT +
Preference number: 5 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVRLDTL*EATTMF
Trigger: AAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTCG...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTACCCGACTGGACACCTaGTTGGAGGCCACCACAATG +
Preference number: 5 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSTRLDT*LEATTM
Trigger: CATTGTGGTGGCCTCCAACAAGGTGTCCAGTCGGGT...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGCAGTGGCATTCACCTTaGAGGTCTTGCTGTCATCGA +
Preference number: 5 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMQWHSP*RSCCHR
Trigger: TCGATGACAGCAAGACCTCAAAGGTGAATGCCACTG...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGCTCAGCTCCACCCACTaGTCCAAAAGCCTTCGATCA +
Preference number: 5 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVLSSTH*SKSLRS
Trigger: TGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAG...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCAGGGATGCATCAGCTTaGTCTCCTCCAGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SPETAVRLVKGPADWPHVRDASA*SPPGSS
Trigger: AGAGCTGCCTGGAGGAGACAAAGCTGATGCATCCCT...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTGGGGCCTGGTGCCGGTaGGGTCCAGAAGCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: QQPARYSSNQHSTACCAGGAWCR*GPEALW
Trigger: CCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCC...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGGGGATAGGAACAAGGTaGGGAAGCCTGAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGGIGTR*GSLRPR
Trigger: CCTCGGCCTCAGGCTTCCCAACCTTGTTCCTATCCC...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CACACACCGAGCGGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTGGGATAGGAACAAGGTaGGGAAGCCTGAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: HTPSGCPRGDPTGMHQLCGIGTR*GSLRPR
Trigger: CCTCGGCCTCAGGCTTCCCAACCTTGTTCCTATCCC...ACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CCAGCTGGGCTCCACATCCATGTCATAGAGGGTCGTCTTCCGCACCACGTGGTGCAGCTGCTGTCAGGGTaGAGACGGCATCGTGGCAAC +
Preference number: 5 (lower is better)
Translates to: PAGLHIHVIEGRLPHHVVQLLSG*RRHRGN
Trigger: GTTGCCACGATGCCGTCTCAACCCTGACAGCAGCTG...CACCACGTGGTGCGGAAGACGACCCTCTATGACATGGATGTGGAGCCCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCGCTGCTGACTGGCAGTaGCTGGGCACAGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSAADWQ*LGTGAA
Trigger: AGCAGCCCCTGTGCCCAGCAACTGCCAGTCAGCAGC...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCCAAGTTTTCAGGGCCTaGGAAGAGGCTGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: SPETAVRLVKGPADWPHVQVFRA*EEAADW
Trigger: CCAGTCAGCAGCCTCTTCCAAGGCCCTGAAAACTTG...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGGGAGCATTCATTCACTaGGGACAGGCTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMGAFIH*GQASRT
Trigger: AGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCC...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGGGGAAGGGCCAGGTTaGGAGCAGCTCAAGCGCACT +
Preference number: 5 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPGEGPG*EQLKRT
Trigger: AGTGCGCTTGAGCTGCTCCAAACCTGGCCCTTCCCC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS GCA 90 bp AAACTGGGCCCTAGGAGAGTACAGGGGACGCCTCCAGCACCTCCTTaGTCTTTGGGCCTACTCCTCAGCCCAGACAGCATCTGGCTCATC +
Preference number: 5 (lower is better)
Translates to: KLGPRRVQGTPPAPP*SLGLLLSPDSIWLI
Trigger: GATGAGCCAGATGCTGTCTGGGCTGAGGAGTAGGCCCAAAGAGCAAGGAGGTGCTGGAGGCGTCCCCTGTACTCTCCTAGGGCCCAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502292.5
ENST00000505061.5
CDS GCA 90 bp CAACTAGGGCCTGTCTGCCCCCACACCCAACTGCCACAGACCCAGTaGCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: QLGPVCPHTQLPQTQ*LLGTLGKDGQCWKF
Trigger: GAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGGTCTGTGGCAGTTGGGTGTGGGGGCAGACAGGCCCTAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505061.5
CDS CCA 90 bp GCCATTATGACGAGAAACCCTTTGGGACAGTCCCCGGCCCAGTCCTaGGTCTTGTCTCAACAGCGGCACTGTCTTCCCACTCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: AIMTRNPLGQSPAQS*VLSQQRHCLPTPEG
Trigger: GCCCTCTGGAGTGGGAAGACAGTGCCGCTGTTGAGACAAGACCCAGGACTGGGCCGGGGACTGTCCCAAAGGGTTTCTCGTCATAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000502292.5
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS CCA 90 bp AAGTTCGTGCACCCTGCAAAGATGAGGAGAGGTGGGAAGAGGCCATaGCCAGGCCGCAGGAAGGACTCACGCCCCCTCCTCTGCTACATT +
Preference number: 5 (lower is better)
Translates to: KFVHPAKMRRGGKRP*PGRRKDSRPLLCYI
Trigger: AATGTAGCAGAGGAGGGGGCGTGAGTCCTTCCTGCGGCCTGGCCATGGCCTCTTCCCACCTCTCCTCATCTTTGCAGGGTGCACGAACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503526.1
CDS CCA 90 bp GATGTAGTCTTGGCTCACAGAGATGCAGTGGGCCACTGTGGTCTGTaGGCAGAGTGGCTCAGCTCAGCAAGGCCACCTGCCCACTCAGTC +
Preference number: 5 (lower is better)
Translates to: DVVLAHRDAVGHCGL*AEWLSSARPPAHSV
Trigger: GACTGAGTGGGCAGGTGGCCTTGCTGAGCTGAGCCACTCTGCCCACAGACCACAGTGGCCCACTGCATCTCTGTGAGCCAAGACTACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502292.5
CDS-3UTR CAA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGATGACGAGAAACCCTTaGGGACAGTCCCCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLMTRNP*GQSPAQ
Trigger: CTGGGCCGGGGACTGTCCCAAAGGGTTTCTCGTCAT...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TGGCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCCGACTGGACACCTTGTaGGAGGCCACCACAATGTTT +
Preference number: 5 (lower is better)
Translates to: WHHCLSAAHQMPVAPGLVRLDTL*EATTMF
Trigger: AAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTCG...GACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTTGCAGGTTAGAGGGGTaGAAAAGGCGCACGGTGCCA +
Preference number: 5 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPCRLEG*KRRTVP
Trigger: TGGCACCGTGCGCCTTTTCAACCCCTCTAACCTGCA...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CAAGGCGGGGGCAAATCTGGAGTGGGGCGGCGGTTGCCGGTGGCCTCAGACATGTCATCTTCTCCCTCCTaGTCACTGTCTGATGAGAGA +
Preference number: 5 (lower is better)
Translates to: QGGGKSGVGRRLPVASDMSSSPS*SLSDER
Trigger: TCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGA...CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCCAGATTTGCCCCCGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTGAGGCCAGTGCCTTCTaGGTACTCTTGGCAAGGACG +
Preference number: 5 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPEASAF*VLLART
Trigger: CGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCTC...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGAGAGGCCAGTGCCTTCTaGGTACTCTTGGCAAGGACG +
Preference number: 5 (lower is better)
Translates to: LTLAQLGQTLPHADGHLREASAF*VLLART
Trigger: CGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCTC...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGACCAGGGGCCCGGCCTTaGGTGACAGGAGAGAATGCA +
Preference number: 5 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGPGARP*VTGENA
Trigger: TGCATTCTCTCCTGTCACCAAAGGCCGGGCCCCTGG...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCAGGGCTGCCCCTGGCTaGGTGCATTCCATGGGGTTG +
Preference number: 5 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPRAAPG*VHSMGL
Trigger: CAACCCCATGGAATGCACCAAGCCAGGGGCAGCCCT...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS GCA 90 bp CGCAGCTCTCTGCGGAGGCCAGGACACCTGCCCTCTTTACAGTACTaGCAGCCCTCTTCCTCACTCACCTCTCCAGTGACCAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: RSSLRRPGHLPSLQY*QPSSSLTSPVTKYL
Trigger: CAAGTACTTGGTCACTGGAGAGGTGAGTGAGGAAGAGGGCTGGCAGTACTGTAAAGAGGGCAGGTGTCCTGGCCTCCGCAGAGAGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507147.1
CDS CCA 90 bp GCCCTAGGAGAGTACAGGGGACGCCTCCAGCACCTCCTTGCTCTTTaGGCCTACTCCTCAGCCCAGACAGCATCTGGCTCATCCAAAACT +
Preference number: 5 (lower is better)
Translates to: ALGEYRGRLQHLLAL*AYSSAQTASGSSKT
Trigger: AGTTTTGGATGAGCCAGATGCTGTCTGGGCTGAGGAGTAGGCCCAAAGAGCAAGGAGGTGCTGGAGGCGTCCCCTGTACTCTCCTAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502292.5
ENST00000505061.5
CDS CCA 90 bp GCCTGTCTGCCCCCACACCCAACTGCCACAGACCCAGTGCCTTCTTaGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: ACLPPHPTATDPVPS*YSWQGRAVLEVLLQ
Trigger: CTGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGGTCTGTGGCAGTTGGGTGTGGGGGCAGACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505061.5
CDS-3UTR CAA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGCCCAGTCCTGGGTCTaGTCTCAACAGCGGCACTGT +
Preference number: 5 (lower is better)
Translates to: STPEYPVYAPPQGANPCSAQSWV*SQQRHC
Trigger: ACAGTGCCGCTGTTGAGACAAGACCCAGGACTGGGC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCGCCCAGTCCTGGGTCTaGTCTCAACAGCGGCACTGT +
Preference number: 5 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSAQSWV*SQQRHC
Trigger: ACAGTGCCGCTGTTGAGACAAGACCCAGGACTGGGC...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGACAAGCCACACCATACTaGTGCTCCTGCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGQATPY*CSCSSA
Trigger: GGCCGAGCTGCAGGAGCACAAGTATGGTGTGGCTTG...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCAAGCCACACCATACTaGTGCTCCTGCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSQATPY*CSCSSA
Trigger: GGCCGAGCTGCAGGAGCACAAGTATGGTGTGGCTTG...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTTTCCAGGCCCACACGTaGACGATCATGTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPFQAHT*TIMSCW
Trigger: CCAGCATGACATGATCGTCAACGTGTGGGCCTGGAA...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGATTCCAGGCCCACACGTaGACGATCATGTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRFQAHT*TIMSCW
Trigger: CCAGCATGACATGATCGTCAACGTGTGGGCCTGGAA...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTCGACTGGACACCTTGTaGGAGGCCACCACAATGTTT +
Preference number: 5 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSRLDTL*EATTMF
Trigger: AAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTCG...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGTCGAGATACCAGAATTaGATGTGTCGGTTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVSRYQN*MCRLPA
Trigger: TGCAGGCAACCGACACATCAAATTCTGGTATCTCGA...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGAACCTTGCCCACTTTCTaGGGGTCCCTCACATCCCAA +
Preference number: 5 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRTLPTF*GSLTSQ
Trigger: TTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAGGT...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR CAA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGAGAGCCGAGTACACCTaGCCCACTTTCTTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLRAEYT*PTFLGS
Trigger: GGACCCCAAGAAAGTGGGCAAGGTGTACTCGGCTCT...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGGCTAGATGCTGTCCATaGGGGCTGACACACACCGAG +
Preference number: 5 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLARCCP*GLTHTE
Trigger: CTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGC...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCGCTAGATGCTGTCCATaGGGGCTGACACACACCGAG +
Preference number: 5 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPARCCP*GLTHTE
Trigger: CTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGC...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCAGCTGATCATGCGGACTaGCCCATCACTGGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: GCPRGDPTGMHQLCLLQAADHAD*PITGCK
Trigger: TTTGCAGCCAGTGATGGGCAAGTCCGCATGATCAGC...TGCCTGGAGGAGACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTGCTGATCATGCGGACTaGCCCATCACTGGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPADHAD*PITGCK
Trigger: TTTGCAGCCAGTGATGGGCAAGTCCGCATGATCAGC...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGGGAGAGGATGGTCCTaGCTGCTTGCCGCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEGRGWS*LLAAPL
Trigger: CAGCGGGGCGGCAAGCAGCAAGGACCATCCTCTCCC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTGGGGCCTGGTGCCGGTaGGGTCCAGAAGCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPGAWCR*GPEALW
Trigger: CCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCC...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACGTCCAGGAGACAGCATaGATGGGGCCTGGTGCCGGT +
Preference number: 5 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHVQETA*MGPGAG
Trigger: ACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGAC...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGGGGATAGGAACAAGGTaGGGAAGCCTGAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEGIGTR*GSLRPR
Trigger: CCTCGGCCTCAGGCTTCCCAACCTTGTTCCTATCCC...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CAA 90 bp CGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCCCCTTGCAGGTTCCAGATCTaGGGCAAAGACCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: REEILRDSDLSGTCTGAPCRFQI*GKDPFL
Trigger: GAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGCA...AGGGGCCCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTGGCTGGAGCCTGCACTaGGAACTCACTGGTATCCAT +
Preference number: 5 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPGWSLH*ELTGIH
Trigger: ATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCC...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCCAGCTGCTGTCAGGGTaGAGACGGCATCGTGGCAAC +
Preference number: 5 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPQLLSG*RRHRGN
Trigger: GTTGCCACGATGCCGTCTCAACCCTGACAGCAGCTG...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCGCTGTGGCCACTCTCTaGGGAGCCCAGCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: RLLTKHHSGCREKVASGLAVATL*GAQLLS
Trigger: TGACAGCAGCTGGGCTCCCAAGAGAGTGGCCACAGC...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp CCATGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGGCTGTGGCCACTCTCTaGGGAGCCCAGCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: PWWGCHSAPGRQYHLQWVAVATL*GAQLLS
Trigger: TGACAGCAGCTGGGCTCCCAAGAGAGTGGCCACAGC...CACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTGGGCAGGGCCAGCTaGCTGAGTGGTGAGACTCGG +
Preference number: 5 (lower is better)
Translates to: GRVCTCNRNREEILRDSDLGRAS*LSGETR
Trigger: CCGAGTCTCACCACTCAGCAAGCTGGCCCTGCCCAG...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACACACTCTGTCCTAGGCTaGGGAGTGGTGCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: MVISELRRHTNMQLSPDTHSVLG*GVVPSP
Trigger: GGGGGAGGGCACCACTCCCAAGCCTAGGACAGAGTG...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACAGGGCTGCCCCTGGCTaGGTGCATTCCATGGGGTTG +
Preference number: 5 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHRAAPG*VHSMGL
Trigger: CAACCCCATGGAATGCACCAAGCCAGGGGCAGCCCT...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGGCTGGGAAGGCTGCTTaGCCTCTGAACACTGCTCCC +
Preference number: 5 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEAGKAA*PLNTAP
Trigger: GGGAGCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGC...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CAA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTGGAGTGGGGCGGCGGTaGCCGGTGGCCTCAGACATG +
Preference number: 5 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGGVGRR*PVASDM
Trigger: CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCC...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGAGTGGGGCGGCGGTaGCCGGTGGCCTCAGACATG +
Preference number: 5 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLGVGRR*PVASDM
Trigger: CATGTCTGAGGCCACCGGCAACCGCCGCCCCACTCC...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS GCA 90 bp CCTCAGCCCAGACAGCATCTGGCTCATCCAAAACTTCTGCATGACTaGTGGGAATGCAGAGAGAGGCCCAAGTGGGGCAGAGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PQPRQHLAHPKLLHD*WECRERPKWGRVSW
Trigger: CCAGGAGACTCTGCCCCACTTGGGCCTCTCTCTGCATTCCCAGCAGTCATGCAGAAGTTTTGGATGAGCCAGATGCTGTCTGGGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502292.5
ENST00000505061.5
CDS GCA 90 bp GGCCTACTCCTCAGCCCAGACAGCATCTGGCTCATCCAAAACTTCTaGATGACTGCTGGGAATGCAGAGAGAGGCCCAAGTGGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GLLLSPDSIWLIQNF*MTAGNAERGPSGAE
Trigger: CTCTGCCCCACTTGGGCCTCTCTCTGCATTCCCAGCAGTCATGCAGAAGTTTTGGATGAGCCAGATGCTGTCTGGGCTGAGGAGTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502292.5
ENST00000505061.5
CDS GCA 90 bp TGCCATCAGCACAGCCACAGAAGATGTAGTCTTGGCTCACAGAGATaGAGTGGGCCACTGTGGTCTGTGGGCAGAGTGGCTCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: CHQHSHRRCSLGSQR*SGPLWSVGRVAQLS
Trigger: GCTGAGCTGAGCCACTCTGCCCACAGACCACAGTGGCCCACTGCATCTCTGTGAGCCAAGACTACATCTTCTGTGGCTGTGCTGATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502292.5
CDS CCA 90 bp CCCCCACACCCAACTGCCACAGACCCAGTGCCTTCTTGGTACTCTTaGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCAGTCCCCTCAT +
Preference number: 5 (lower is better)
Translates to: PPHPTATDPVPSWYS*QGRAVLEVLLQSPH
Trigger: ATGAGGGGACTGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGGTCTGTGGCAGTTGGGTGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505061.5
CDS-3UTR CAA 90 bp TCTGCCTATGGCGCAGCAGGGCGGGTGAAGGGGCTCTCGTGGCCTGAAGCTGTGGATCTCAACAGATTCTaGATCCGGCTGGTAATGGTT +
Preference number: 5 (lower is better)
Translates to: SAYGAAGRVKGLSWPEAVDLNRF*IRLVMV
Trigger: AACCATTACCAGCCGGATCAAGAATCTGTTGAGATC...CACAGCTTCAGGCCACGAGAGCCCCTTCACCCGCCCTGCTGCGCCATAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTTTACTCCTGCGCAGTTaGATGGATGGAGATCTCAAC +
Preference number: 5 (lower is better)
Translates to: LGPALGPLEQLHWPESQSLLLRS*MDGDLN
Trigger: GTTGAGATCTCCATCCATCAAACTGCGCAGGAGTAA...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCTCCCGAGACAGCAGTGCGCCTGGTGAAGGGGCCTGCAGACTGGCCTCATGTCTTACTCCTGCGCAGTTaGATGGATGGAGATCTCAAC +
Preference number: 5 (lower is better)
Translates to: SPETAVRLVKGPADWPHVLLLRS*MDGDLN
Trigger: GTTGAGATCTCCATCCATCAAACTGCGCAGGAGTAA...GACATGAGGCCAGTCTGCAGGCCCCTTCACCAGGCGCACTGCTGTCTCGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CTGGGACCTGCACTGGGGCCCCTGGAGCAGCTCCACTGGCCAGAGTCTCAAAGTGTTTTCCTGGAACTGTaGAGGATGTGGTGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: LGPALGPLEQLHWPESQSVFLEL*RMWCCL
Trigger: CAAACAGCACCACATCCTCAACAGTTCCAGGAAAAC...ACTTTGAGACTCTGGCCAGTGGAGCTGCTCCAGGGGCCCCAGTGCAGGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCGACTGGACACCTTGTaGGAGGCCACCACAATGTTT +
Preference number: 5 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPRLDTL*EATTMF
Trigger: AAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTCG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCACATCAGTGAATAGGTaGTTCCGTAGCTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: MREPVQETALMGPGAGWVTSVNR*FRSSPS
Trigger: GCTGGGAGAGCTACGGAACAACCTATTCACTGATGT...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGTGCAGGTTAGAGGGGTaGAAAAGGCGCACGGTGCCA +
Preference number: 5 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQCRLEG*KRRTVP
Trigger: TGGCACCGTGCGCCTTTTCAACCCCTCTAACCTGCA...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CATCTCACTCAGGGACTGAAGTTCGTGCACCCTAAGTGTGCCCATACGGTCCCCAGAGCCGAGTACACCTaGCCCACTTTCTTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: HLTQGLKFVHPKCAHTVPRAEYT*PTFLGS
Trigger: GGACCCCAAGAAAGTGGGCAAGGTGTACTCGGCTCT...GGGGACCGTATGGGCACACTTAGGGTGCACGAACTTCAGTCCCTGAGTGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR CAA 90 bp TCCCAGAGTTCCCCGGGCTGGAGCCTGCACTTGGAACTCACTGGTATCCATGGTAGGGATGCATCAGCTTaGTCTCCTCCAGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SQSSPGWSLHLELTGIHGRDASA*SPPGSS
Trigger: AGAGCTGCCTGGAGGAGACAAAGCTGATGCATCCCT...ACCATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCGTCCAGGAGACAGCATaGATGGGGCCTGGTGCCGGT +
Preference number: 5 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFVQETA*MGPGAG
Trigger: ACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGAC...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACGTCCAGGAGACAGCATaGATGGGGCCTGGTGCCGGT +
Preference number: 5 (lower is better)
Translates to: GRVCTCNRNREEILRDSDVQETA*MGPGAG
Trigger: ACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGAC...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GCACCATTGCCTCTCGGCTGCTCACCAGATGCCTGTGGCACCTGGGCTGGTCTCTCATCTTCTCCCTCCTaGTCACTGTCTGATGAGAGA +
Preference number: 5 (lower is better)
Translates to: APLPLGCSPDACGTWAGLSSSPS*SLSDER
Trigger: TCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGA...GAGACCAGCCCAGGTGCCACAGGCATCTGGTGAGCAGCCGAGAGGCAATGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTGAGGCCAGTGCCTTCTaGGTACTCTTGGCAAGGACG +
Preference number: 5 (lower is better)
Translates to: STPEYPVYAPPQGANPCSEASAF*VLLART
Trigger: CGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCTC...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGCTGCTGACTGGCAGTaGCTGGGCACAGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFAADWQ*LGTGAA
Trigger: AGCAGCCCCTGTGCCCAGCAACTGCCAGTCAGCAGC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGAGTGCATTCCATGGGGTaGGGAGTCTTCTCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGVHSMG*GVFSGG
Trigger: ACCCCCTGAGAAGACTCCCAACCCCATGGAATGCAC...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CATGTCTTTCCTGTGGCACCAGACTGTGCACAGACTGGGCCTTCTGGAGTCCAGGTGCATTCCATGGGGTaGGGAGTCTTCTCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: HVFPVAPDCAQTGPSGVQVHSMG*GVFSGG
Trigger: ACCCCCTGAGAAGACTCCCAACCCCATGGAATGCAC...CTGGACTCCAGAAGGCCCAGTCTGTGCACAGTCTGGTGCCACAGGAAAGACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACGCTGGGAAGGCTGCTTaGCCTCTGAACACTGCTCCC +
Preference number: 5 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHAGKAA*PLNTAP
Trigger: GGGAGCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGC...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTAATGCTGGGCCCCTCTaGGAGGGAGAATGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: QQPARYSSNQHSTACCAGNAGPL*EGEWEW
Trigger: CCACTCCCATTCTCCCTCCAAGAGGGGCCCAGCATT...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS GCA 90 bp AGACAGCATCTGGCTCATCCAAAACTTCTGCATGACTGCTGGGAATaGAGAGAGAGGCCCAAGTGGGGCAGAGTCTCCTGGGTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: RQHLAHPKLLHDCWE*RERPKWGRVSWVGL
Trigger: CAGCCCAACCCAGGAGACTCTGCCCCACTTGGGCCTCTCTCTGCATTCCCAGCAGTCATGCAGAAGTTTTGGATGAGCCAGATGCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502292.5
ENST00000505061.5
CDS CCA 90 bp TGGCGAGATGGATGGGATGGGCCCCAGTTGGTCTCGTGGACGATCTaGTTCCCGTTAATGCCCAACTGTTCCCATGGCAACTGTAGTGTC +
Preference number: 5 (lower is better)
Translates to: WRDGWDGPQLVSWTI*FPLMPNCSHGNCSV
Trigger: GACACTACAGTTGCCATGGGAACAGTTGGGCATTAACGGGAACCAGATCGTCCACGAGACCAACTGGGGCCCATCCCATCCATCTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510535.1
CDS CCA 90 bp GCGTTTAACTGGCGAGATGGATGGGATGGGCCCCAGTTGGTCTCGTaGACGATCTGGTTCCCGTTAATGCCCAACTGTTCCCATGGCAAC +
Preference number: 5 (lower is better)
Translates to: AFNWRDGWDGPQLVS*TIWFPLMPNCSHGN
Trigger: GTTGCCATGGGAACAGTTGGGCATTAACGGGAACCAGATCGTCCACGAGACCAACTGGGGCCCATCCCATCCATCTCGCCAGTTAAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510535.1
CDS-3UTR CAA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACAATGACGAGAAACCCTTaGGGACAGTCCCCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: MVISELRRHTNMQLSPDTMTRNP*GQSPAQ
Trigger: CTGGGCCGGGGACTGTCCCAAAGGGTTTCTCGTCAT...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp AGAGGGCCAGCCCTTCCCAGATTCCTAGATGGGGCAGGCTGCCCTCCTACCTCTTTGTGTTTCCGGGGATaGAACAACACAACCACACAC +
Preference number: 5 (lower is better)
Translates to: RGPALPRFLDGAGCPPTSLCFRG*NNTTTH
Trigger: GTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACAA...AGAGGTAGGAGGGCAGCCTGCCCCATCTAGGAATCTGGGAAGGGCTGGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCGACCCCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTTTCCAGGCCCACACGTaGACGATCATGTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: STPEYPVYAPPQGANPCSFQAHT*TIMSCW
Trigger: CCAGCATGACATGATCGTCAACGTGTGGGCCTGGAA...ACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGGGGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp ATGAGAGAGCCGGTCCAGGAGACAGCATTGATGGGGCCTGGTGCCGGTTGGGTCTCGAGATACCAGAATTaGATGTGTCGGTTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: MREPVQETALMGPGAGWVSRYQN*MCRLPA
Trigger: TGCAGGCAACCGACACATCAAATTCTGGTATCTCGA...GACCCAACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGACCGGCTCTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCCAGTGGCATTCACCTTaGAGGTCTTGCTGTCATCGA +
Preference number: 5 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCQWHSP*RSCCHR
Trigger: TCGATGACAGCAAGACCTCAAAGGTGAATGCCACTG...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CTGACGCTGGCGCAACTCGGCCAGACGCTGCCTCATGCTGATGGTCATCTCAGACAGTGGCATTCACCTTaGAGGTCTTGCTGTCATCGA +
Preference number: 5 (lower is better)
Translates to: LTLAQLGQTLPHADGHLRQWHSP*RSCCHR
Trigger: TCGATGACAGCAAGACCTCAAAGGTGAATGCCACTG...TCTGAGATGACCATCAGCATGAGGCAGCGTCTGGCCGAGTTGCGCCAGCGTCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTCAGTGGCATTCACCTTaGAGGTCTTGCTGTCATCGA +
Preference number: 5 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPQWHSP*RSCCHR
Trigger: TCGATGACAGCAAGACCTCAAAGGTGAATGCCACTG...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTTGCAGGTTAGAGGGGTaGAAAAGGCGCACGGTGCCA +
Preference number: 5 (lower is better)
Translates to: QQPARYSSNQHSTACCAGCRLEG*KRRTVP
Trigger: TGGCACCGTGCGCCTTTTCAACCCCTCTAACCTGCA...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGCACAGGCGGATGGTGTaGTCTGAGGAGCAGGTAATA +
Preference number: 5 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLHRRMV*SEEQVI
Trigger: TATTACCTGCTCCTCAGACAACACCATCCGCCTGTG...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCAGGGATGCATCAGCTTaGTCTCCTCCAGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSRDASA*SPPGSS
Trigger: AGAGCTGCCTGGAGGAGACAAAGCTGATGCATCCCT...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTGCTAGATGCTGTCCATaGGGGCTGACACACACCGAG +
Preference number: 5 (lower is better)
Translates to: QQPARYSSNQHSTACCAGARCCP*GLTHTE
Trigger: CTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGC...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCTAGATGCTGTCCATaGGGGCTGACACACACCGAG +
Preference number: 5 (lower is better)
Translates to: RNREEILRDSDLSGTCTGARCCP*GLTHTE
Trigger: CTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGC...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCGGGAGAGGATGGTCCTaGCTGCTTGCCGCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLGRGWS*LLAAPL
Trigger: CAGCGGGGCGGCAAGCAGCAAGGACCATCCTCTCCC...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACGCCTTCTTGGTACTCTaGGCAAGGACGGGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDAFLVL*ARTGSA
Trigger: AGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGC...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACGAGGCCAGTGCCTTCTaGGTACTCTTGGCAAGGACG +
Preference number: 5 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHEASAF*VLLART
Trigger: CGTCCTTGCCAAGAGTACCAAGAAGGCACTGGCCTC...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCGCTGTGGCCACTCTCTaGGGAGCCCAGCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFAVATL*GAQLLS
Trigger: TGACAGCAGCTGGGCTCCCAAGAGAGTGGCCACAGC...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTCACTCTGTCCTAGGCTaGGGAGTGGTGCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCHSVLG*GVVPSP
Trigger: GGGGGAGGGCACCACTCCCAAGCCTAGGACAGAGTG...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTCCAGAACTCAGAGTTaGCGTTCCATACGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLSRTQS*RSIRRS
Trigger: GGAACGGCGTATGGAACGCAAACTCTGAGTTCTGGA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CGGTCCCCTGATGCTAGATGCTGTCCATTGGGGCTGACACACACCGAGCGGATGGGAGCATTCATTCACTaGGGACAGGCTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: RSPDARCCPLGLTHTERMGAFIH*GQASRT
Trigger: AGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCC...CATCCGCTCGGTGTGTGTCAGCCCCAATGGACAGCATCTAGCATCAGGGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTTTTCTAGTGTCTCCTTaGGCCCCAGCACCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: QQPARYSSNQHSTACCAGFLVSP*APAPPS
Trigger: GGAGGGAGGTGCTGGGGCCAAAGGAGACACTAGAAA...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCTTTCTAGTGTCTCCTTaGGCCCCAGCACCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: RLLTKHHSGCREKVASGLFLVSP*APAPPS
Trigger: GGAGGGAGGTGCTGGGGCCAAAGGAGACACTAGAAA...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGAGATGGCGTGTAGCTTaGTCACCTAGGTTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLRWRVA*SPRLEC
Trigger: GCACTCCAACCTAGGTGACAAAGCTACACGCCATCT...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS TCA 90 bp TACTCCTCAGCCCAGACAGCATCTGGCTCATCCAAAACTTCTGCATaGCTGCTGGGAATGCAGAGAGAGGCCCAAGTGGGGCAGAGTCTC +
Preference number: 5 (lower is better)
Translates to: YSSAQTASGSSKTSA*LLGMQREAQVGQSL
Trigger: GAGACTCTGCCCCACTTGGGCCTCTCTCTGCATTCCCAGCAGTCATGCAGAAGTTTTGGATGAGCCAGATGCTGTCTGGGCTGAGGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502292.5
ENST00000505061.5
CDS GCA 90 bp TCCCTACAGGGAGAACATGTGGGAGAAGGCCCAGAGAAGGCTCAATaGTCCTCCCTGCCAAAATGGCGAGAAACTCATAGCACCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SLQGEHVGEGPEKAQ*SSLPKWRETHSTRA
Trigger: TGCCCTGGTGCTATGAGTTTCTCGCCATTTTGGCAGGGAGGAGCATTGAGCCTTCTCTGGGCCTTCTCCCACATGTTCTCCCTGTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512433.1
CDS-3UTR CAA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCATGACGAGAAACCCTTaGGGACAGTCCCCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFMTRNP*GQSPAQ
Trigger: CTGGGCCGGGGACTGTCCCAAAGGGTTTCTCGTCAT...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCTTGTGTTTCCGGGGATaGAACAACACAACCACACAC +
Preference number: 5 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCLCFRG*NNTTTH
Trigger: GTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACAA...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GGTCCTCAGCTCCACCCACTTGTCCAAAAGCCTTCGATCACTGAACTCGCACAGTTCCAGGCCCACACGTaGACGATCATGTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: GPQLHPLVQKPSITELAQFQAHT*TIMSCW
Trigger: CCAGCATGACATGATCGTCAACGTGTGGGCCTGGAA...CTGTGCGAGTTCAGTGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR CAA 90 bp GGGCGGGTCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACACCCGACTGGACACCTaGTTGGAGGCCACCACAATG +
Preference number: 5 (lower is better)
Translates to: GRVCTCNRNREEILRDSDTRLDT*LEATTM
Trigger: CATTGTGGTGGCCTCCAACAAGGTGTCCAGTCGGGT...GTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGGCCCCTTTCACCTTTGAGGTCTaGCTGTCATCGAGATACCAG +
Preference number: 5 (lower is better)
Translates to: REEILRDSDLSGTCTGAPFTFEV*LSSRYQ
Trigger: CTGGTATCTCGATGACAGCAAGACCTCAAAGGTGAA...AGGGGCCCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCCCTCCTCTCAAACTCCAGTATCCAGCACACCCGTGGGTGCCCAGCACTGCCTACAGAAGATGTAGTCTaGGCTCACAGAGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: SLLSNSSIQHTRGCPALPTEDVV*AHRDAV
Trigger: CACTGCATCTCTGTGAGCCAAGACTACATCTTCTGT...AGGCAGTGCTGGGCACCCACGGGTGTGCTGGATACTGGAGTTTGAGAGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GAGATGCCATCCACACTGAGGGGCTCCGTGCTCTCAGAGTCTTCAGTGGGGTGCACAGAAGATGTAGTCTaGGCTCACAGAGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: EMPSTLRGSVLSESSVGCTEDVV*AHRDAV
Trigger: CACTGCATCTCTGTGAGCCAAGACTACATCTTCTGT...GCACCCCACTGAAGACTCTGAGAGCACGGAGCCCCTCAGTGTGGATGGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACATGCAGGTTAGAGGGGTaGAAAAGGCGCACGGTGCCA +
Preference number: 5 (lower is better)
Translates to: MVISELRRHTNMQLSPDTCRLEG*KRRTVP
Trigger: TGGCACCGTGCGCCTTTTCAACCCCTCTAACCTGCA...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGCTGATCATGCGGACTaGCCCATCACTGGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGADHAD*PITGCK
Trigger: TTTGCAGCCAGTGATGGGCAAGTCCGCATGATCAGC...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTGGGATAGGAACAAGGTaGGGAAGCCTGAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPGIGTR*GSLRPR
Trigger: CCTCGGCCTCAGGCTTCCCAACCTTGTTCCTATCCC...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGTGCAGGTTCCAGATCTaGGGCAAAGACCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGCRFQI*GKDPFL
Trigger: GAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGCA...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CCATGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGTGCAGGTTCCAGATCTaGGGCAAAGACCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PWWGCHSAPGRQYHLQWVCRFQI*GKDPFL
Trigger: GAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGCA...CACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTGGGGGATTGGCACCATaGCCTCTCGGCTGCTCACCA +
Preference number: 5 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCGGLAP*PLGCSP
Trigger: TGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCC...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTCAGCTGCTGTCAGGGTaGAGACGGCATCGTGGCAAC +
Preference number: 5 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPQLLSG*RRHRGN
Trigger: GTTGCCACGATGCCGTCTCAACCCTGACAGCAGCTG...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp TCTGAACACTGCTCCCTGCTTTCCACTCCAAGCAGCCCCGCAGGTTTTGGTGAGATACTGCGGGATATCTaGGCCATGGAACTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SEHCSLLSTPSSPAGFGEILRDI*AMELVV
Trigger: CACCACCAGTTCCATGGCCAAGATATCCCGCAGTAT...CTCACCAAAACCTGCGGGGCTGCTTGGAGTGGAAAGCAGGGAGCAGTGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCGATGGGGGCATGAGCTaGAGGTTCAGCCACCAGGCC +
Preference number: 5 (lower is better)
Translates to: TLCMLHHRELIPAVISNGDGGMS*RFSHQA
Trigger: GGCCTGGTGGCTGAACCTCAAGCTCATGCCCCCATC...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCCCAGGGGCCCGGCCTTaGGTGACAGGAGAGAATGCA +
Preference number: 5 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSPGARP*VTGENA
Trigger: TGCATTCTCTCCTGTCACCAAAGGCCGGGCCCCTGG...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGTCTGAGCTCCAGGTATaGGGGAAAACCACCCTGCTC +
Preference number: 5 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGSELQV*GKTTLL
Trigger: GAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAGA...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCTCTGAGCTCCAGGTATaGGGGAAAACCACCCTGCTC +
Preference number: 5 (lower is better)
Translates to: RLLTKHHSGCREKVASGLSELQV*GKTTLL
Trigger: GAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAGA...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCGGGGAAGGGCCAGGTTaGGAGCAGCTCAAGCGCACT +
Preference number: 5 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSGEGPG*EQLKRT
Trigger: AGTGCGCTTGAGCTGCTCCAAACCTGGCCCTTCCCC...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCGCCCAGTCCTGGGTCTaGTCTCAACAGCGGCACTGT +
Preference number: 5 (lower is better)
Translates to: TLCMLHHRELIPAVISNGAQSWV*SQQRHC
Trigger: ACAGTGCCGCTGTTGAGACAAGACCCAGGACTGGGC...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp AGACTGGGCCTTCTGGAGTCCAGAAAAGGGGCTGGCTGTGGCCACTCTCTTGGGGATCTCAACAGATTCTaGATCCGGCTGGTAATGGTT +
Preference number: 5 (lower is better)
Translates to: RLGLLESRKGAGCGHSLGDLNRF*IRLVMV
Trigger: AACCATTACCAGCCGGATCAAGAATCTGTTGAGATC...CCCAAGAGAGTGGCCACAGCCAGCCCCTTTTCTGGACTCCAGAAGGCCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGACCCGACTGGACACCTaGTTGGAGGCCACCACAATG +
Preference number: 5 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWTRLDT*LEATTM
Trigger: CATTGTGGTGGCCTCCAACAAGGTGTCCAGTCGGGT...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CACGACATGGTCCCACTCTACCTCCTAGGGTCCCCTATCTCCTTTCCCTCACCCTCGAGATACCAGAATTaGATGTGTCGGTTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: HDMVPLYLLGSPISFPSPSRYQN*MCRLPA
Trigger: TGCAGGCAACCGACACATCAAATTCTGGTATCTCGA...GGGTGAGGGAAAGGAGATAGGGGACCCTAGGAGGTAGAGTGGGACCATGTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCCAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCACATCAGTGAATAGGTaGTTCCGTAGCTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: GQSFMFAQVRAYCPAATSTSVNR*FRSSPS
Trigger: GCTGGGAGAGCTACGGAACAACCTATTCACTGATGT...GGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCTCAGCTCCACCCACTaGTCCAAAAGCCTTCGATCA +
Preference number: 5 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDLSSTH*SKSLRS
Trigger: TGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CAGAGCTTCATGTTTGCCCAGGTGAGGGCTTACTGTCCTGCAGCAACATCCCACCTCAGCTCCACCCACTaGTCCAAAAGCCTTCGATCA +
Preference number: 5 (lower is better)
Translates to: QSFMFAQVRAYCPAATSHLSSTH*SKSLRS
Trigger: TGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAG...GTGGGATGTTGCTGCAGGACAGTAAGCCCTCACCTGGGCAAACATGAAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCCCAGAGTTCCCCGGGCTGGAGCCTGCACTTGGAACTCACTGGTATCCATGGTACAGAAGATGTAGTCTaGGCTCACAGAGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: SQSSPGWSLHLELTGIHGTEDVV*AHRDAV
Trigger: CACTGCATCTCTGTGAGCCAAGACTACATCTTCTGT...ACCATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCCCGGGGAACTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGAGAGCCGAGTACACCTaGCCCACTTTCTTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWRAEYT*PTFLGS
Trigger: GGACCCCAAGAAAGTGGGCAAGGTGTACTCGGCTCT...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACCACAGGCGGATGGTGTaGTCTGAGGAGCAGGTAATA +
Preference number: 5 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDHRRMV*SEEQVI
Trigger: TATTACCTGCTCCTCAGACAACACCATCCGCCTGTG...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp AGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCACTGGGCACAGGCGGATGGTGTaGTCTGAGGAGCAGGTAATA +
Preference number: 5 (lower is better)
Translates to: RNREEILRDSDLSGTCTGHRRMV*SEEQVI
Trigger: TATTACCTGCTCCTCAGACAACACCATCCGCCTGTG...CCCAGTGCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512970.5
CDS-3UTR CAA 90 bp CACACACCGAGCGGATGCCCACGCGGGGATCCAACAGGGATGCATCAGCTTTGTAAAATGGAGAGATTCTaGTCAGAACAGCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: HTPSGCPRGDPTGMHQLCKMERF*SEQLVA
Trigger: TGCCACCAGCTGTTCTGACAAGAATCTCTCCATTTT...ACAAAGCTGATGCATCCCTGTTGGATCCCCGCGTGGGCATCCGCTCGGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGGGGGCCTGGTGCCGGTaGGGTCCAGAAGCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWGAWCR*GPEALW
Trigger: CCAAAGGGCTTCTGGACCCAACCGGCACCAGGCCCC...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCGTCCAGGAGACAGCATaGATGGGGCCTGGTGCCGGT +
Preference number: 5 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLVQETA*MGPGAG
Trigger: ACCGGCACCAGGCCCCATCAATGCTGTCTCCTGGAC...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCAGGAGGTAGGCCAGCGCCCCGTAAACGAGGGATGTTCCAACACAGGCTTCTGTCATCTTCTCCCTCCTaGTCACTGTCTGATGAGAGA +
Preference number: 5 (lower is better)
Translates to: SGGRPAPRKRGMFQHRLLSSSPS*SLSDER
Trigger: TCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGA...CAGAAGCCTGTGTTGGAACATCCCTCGTTTACGGGGCGCTGGCCTACCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGGGGATTGGCACCATaGCCTCTCGGCTGCTCACCA +
Preference number: 5 (lower is better)
Translates to: SVLATGIVKRYSETLTSLGGLAP*PLGCSP
Trigger: TGGTGAGCAGCCGAGAGGCAATGGTGCCAATCCCCC...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CCATGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGATACTGCGGGATATCTaGGCCATGGAACTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PWWGCHSAPGRQYHLQWVILRDI*AMELVV
Trigger: CACCACCAGTTCCATGGCCAAGATATCCCGCAGTAT...CACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCGGTCAGGCAGTGGTTaGGGGATGTCCAGGACCAGG +
Preference number: 5 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLRSGSG*GMSRTR
Trigger: CCTGGTCCTGGACATCCCCAAACCACTGCCTGACCG...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCCAGGGGCCCGGCCTTaGGTGACAGGAGAGAATGCA +
Preference number: 5 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLPGARP*VTGENA
Trigger: TGCATTCTCTCCTGTCACCAAAGGCCGGGCCCCTGG...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp GTAGAGGTGAAGGCCCACAGTTGGCTGACGGGCACTGAATACCACATCACCTCTTCCAGAACTCAGAGTTaGCGTTCCATACGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: VEVKAHSWLTGTEYHITSSRTQS*RSIRRS
Trigger: GGAACGGCGTATGGAACGCAAACTCTGAGTTCTGGA...AGAGGTGATGTGGTATTCAGTGCCCGTCAGCCAACTGTGGGCCTTCACCTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGTCCAGAACTCAGAGTTaGCGTTCCATACGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGSRTQS*RSIRRS
Trigger: GGAACGGCGTATGGAACGCAAACTCTGAGTTCTGGA...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGACAGATGGCGTGTAGCTTaGTCACCTAGGTTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: ECAGSGPNTNSSLLMAGDRWRVA*SPRLEC
Trigger: GCACTCCAACCTAGGTGACAAAGCTACACGCCATCT...GTCCCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCTTCTCCAAGGTCACCTaGGAGCTGAGGTCCTCTCGT +
Preference number: 5 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFFSKVT*ELRSSR
Trigger: ACGAGAGGACCTCAGCTCCAAGGTGACCTTGGAGAA...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTTCTCCAAGGTCACCTaGGAGCTGAGGTCCTCTCGT +
Preference number: 5 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWFSKVT*ELRSSR
Trigger: ACGAGAGGACCTCAGCTCCAAGGTGACCTTGGAGAA...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCCAAGCCACACCATACTaGTGCTCCTGCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLQATPY*CSCSSA
Trigger: GGCCGAGCTGCAGGAGCACAAGTATGGTGTGGCTTG...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTCCAGGCCCACACGTaGACGATCATGTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPFQAHT*TIMSCW
Trigger: CCAGCATGACATGATCGTCAACGTGTGGGCCTGGAA...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp AGGCTTCTGACTAAGCATCATTCAGGATGCAGGGAGAAGGTGGCCTCTGGGCTCCAGTGGCATTCACCTTaGAGGTCTTGCTGTCATCGA +
Preference number: 5 (lower is better)
Translates to: RLLTKHHSGCREKVASGLQWHSP*RSCCHR
Trigger: TCGATGACAGCAAGACCTCAAAGGTGAATGCCACTG...GAGCCCAGAGGCCACCTTCTCCCTGCATCCTGAATGATGCTTAGTCAGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTACATCAGTGAATAGGTaGTTCCGTAGCTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: QQPARYSSNQHSTACCAGTSVNR*FRSSPS
Trigger: GCTGGGAGAGCTACGGAACAACCTATTCACTGATGT...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp ATGGTCATCTCAGAGCTCAGGCGCCACACAAATATGCAGCTGTCCCCAGACACACTCAGCTCCACCCACTaGTCCAAAAGCCTTCGATCA +
Preference number: 5 (lower is better)
Translates to: MVISELRRHTNMQLSPDTLSSTH*SKSLRS
Trigger: TGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAG...TGTGTCTGGGGACAGCTGCATATTTGTGTGGCGCCTGAGCTCTGAGATGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCCTCAGCTCCACCCACTaGTCCAAAAGCCTTCGATCA +
Preference number: 5 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFLSSTH*SKSLRS
Trigger: TGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAG...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTTGCAGGTTAGAGGGGTaGAAAAGGCGCACGGTGCCA +
Preference number: 5 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCCRLEG*KRRTVP
Trigger: TGGCACCGTGCGCCTTTTCAACCCCTCTAACCTGCA...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGACCTTGCCCACTTTCTaGGGGTCCCTCACATCCCAA +
Preference number: 5 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWTLPTF*GSLTSQ
Trigger: TTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAGGT...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTGCTGATCATGCGGACTaGCCCATCACTGGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPADHAD*PITGCK
Trigger: TTTGCAGCCAGTGATGGGCAAGTCCGCATGATCAGC...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TGGCCCAGAACCCATTTCTTTATAAGCCTCTGCCTATGGCGCAGCAGGGCGGGTTCATCTTCTCCCTCCTaGTCACTGTCTGATGAGAGA +
Preference number: 5 (lower is better)
Translates to: WPRTHFFISLCLWRSRAGSSSPS*SLSDER
Trigger: TCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGA...ACCCGCCCTGCTGCGCCATAGGCAGAGGCTTATAAAGAAATGGGTTCTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp GTCCCCTCATCTTCTCCCTCCTTGTCACTGTCTGATGAGAGAGCCGGTCCAGGATCATCTTCTCCCTCCTaGTCACTGTCTGATGAGAGA +
Preference number: 5 (lower is better)
Translates to: VPSSSPSLSLSDERAGPGSSSPS*SLSDER
Trigger: TCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGA...TCCTGGACCGGCTCTCTCATCAGACAGTGACAAGGAGGGAGAAGATGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTGCCTTCTTGGTACTCTaGGCAAGGACGGGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCAFLVL*ARTGSA
Trigger: AGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGC...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTGCAGGTTCCAGATCTaGGGCAAAGACCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPCRFQI*GKDPFL
Trigger: GAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGCA...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCTGCAGGTTCCAGATCTaGGGCAAAGACCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFCRFQI*GKDPFL
Trigger: GAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGCA...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATGGCTGGAGCCTGCACTaGGAACTCACTGGTATCCAT +
Preference number: 5 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDGWSLH*ELTGIH
Trigger: ATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCC...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CAGTGCCTTCTTGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCATACTGCGGGATATCTaGGCCATGGAACTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: QCLLGTLGKDGQCWKFFFILRDI*AMELVV
Trigger: CACCACCAGTTCCATGGCCAAGATATCCCGCAGTAT...GAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCCGGTCAGGCAGTGGTTaGGGGATGTCCAGGACCAGG +
Preference number: 5 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFRSGSG*GMSRTR
Trigger: CCTGGTCCTGGACATCCCCAAACCACTGCCTGACCG...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGGCTGCTGACTGGCAGTaGCTGGGCACAGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWAADWQ*LGTGAA
Trigger: AGCAGCCCCTGTGCCCAGCAACTGCCAGTCAGCAGC...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGTTTCTAGTGTCTCCTTaGGCCCCAGCACCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLFLVSP*APAPPS
Trigger: GGAGGGAGGTGCTGGGGCCAAAGGAGACACTAGAAA...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS GCA 90 bp CTTCTCCAAGGTCACCTTGGAGCTGAGGTCCTCTCGTCGGTTTCCTaGCTTACTCCTGCGCAGTTTGATGGATGGAGATCTCAACAGATT +
Preference number: 5 (lower is better)
Translates to: LLQGHLGAEVLSSVS*LTPAQFDGWRSQQI
Trigger: AATCTGTTGAGATCTCCATCCATCAAACTGCGCAGGAGTAAGGCAGGAAACCGACGAGAGGACCTCAGCTCCAAGGTGACCTTGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000502292.5
ENST00000505061.5
ENST00000510535.1
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CAA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTATGACGAGAAACCCTTaGGGACAGTCCCCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: YILTYPLTSATYLSHLPLMTRNP*GQSPAQ
Trigger: CTGGGCCGGGGACTGTCCCAAAGGGTTTCTCGTCAT...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGTTCTCCAAGGTCACCTaGGAGCTGAGGTCCTCTCGT +
Preference number: 5 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLFSKVT*ELRSSR
Trigger: ACGAGAGGACCTCAGCTCCAAGGTGACCTTGGAGAA...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CCATGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGTTGTGTTTCCGGGGATaGAACAACACAACCACACAC +
Preference number: 5 (lower is better)
Translates to: PWWGCHSAPGRQYHLQWVLCFRG*NNTTTH
Trigger: GTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACAA...CACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CCATGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGGTTTTCCTGGAACTGTaGAGGATGTGGTGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: PWWGCHSAPGRQYHLQWVVFLEL*RMWCCL
Trigger: CAAACAGCACCACATCCTCAACAGTTCCAGGAAAAC...CACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGGTTTTCCTGGAACTGTaGAGGATGTGGTGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGVFLEL*RMWCCL
Trigger: CAAACAGCACCACATCCTCAACAGTTCCAGGAAAAC...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATCGACTGGACACCTTGTaGGAGGCCACCACAATGTTT +
Preference number: 5 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDRLDTL*EATTMF
Trigger: AAACATTGTGGTGGCCTCCAACAAGGTGTCCAGTCG...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCACCTTGCCCACTTTCTaGGGGTCCCTCACATCCCAA +
Preference number: 5 (lower is better)
Translates to: TLCMLHHRELIPAVISNGTLPTF*GSLTSQ
Trigger: TTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAGGT...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTACCTTGCCCACTTTCTaGGGGTCCCTCACATCCCAA +
Preference number: 5 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCTLPTF*GSLTSQ
Trigger: TTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAGGT...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGAGGGATGCATCAGCTTaGTCTCCTCCAGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLRDASA*SPPGSS
Trigger: AGAGCTGCCTGGAGGAGACAAAGCTGATGCATCCCT...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTAGGGATGCATCAGCTTaGTCTCCTCCAGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGRDASA*SPPGSS
Trigger: AGAGCTGCCTGGAGGAGACAAAGCTGATGCATCCCT...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCGCCTTCTTGGTACTCTaGGCAAGGACGGGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLAFLVL*ARTGSA
Trigger: AGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGC...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCAGGCTGGAGCCTGCACTaGGAACTCACTGGTATCCAT +
Preference number: 5 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSGWSLH*ELTGIH
Trigger: ATGGATACCAGTGAGTTCCAAGTGCAGGCTCCAGCC...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAATACTGCGGGATATCTaGGCCATGGAACTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEILRDI*AMELVV
Trigger: CACCACCAGTTCCATGGCCAAGATATCCCGCAGTAT...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACAAGTTTTCAGGGCCTaGGAAGAGGCTGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSQVFRA*EEAADW
Trigger: CCAGTCAGCAGCCTCTTCCAAGGCCCTGAAAACTTG...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp TGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGCAGGTTCCAGATTCCAGAACTCAGAGTTaGCGTTCCATACGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: CHSAPGRQYHLQWVQVPDSRTQS*RSIRRS
Trigger: GGAACGGCGTATGGAACGCAAACTCTGAGTTCTGGA...ATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCTGAGCTCCAGGTATaGGGGAAAACCACCCTGCTC +
Preference number: 5 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGSELQV*GKTTLL
Trigger: GAGCAGGGTGGTTTTCCCCAATACCTGGAGCTCAGA...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CCTATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGCTTTGTCACCTAGGTaGGAGTGCAATGGCGCGATC +
Preference number: 5 (lower is better)
Translates to: PMGYLVSARLWTPRIQNLALSPR*ECNGAI
Trigger: GATCGCGCCATTGCACTCCAACCTAGGTGACAAAGC...CAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS GCA 90 bp AACACAACCACACACCTTGGAGCTGAGGTCCTCTCGTCGGTTTCCTaGCTTACTCCTGCGCAGTTTGATGGATGGAGATCTCAACAGATT +
Preference number: 5 (lower is better)
Translates to: NTTTHLGAEVLSSVS*LTPAQFDGWRSQQI
Trigger: AATCTGTTGAGATCTCCATCCATCAAACTGCGCAGGAGTAAGGCAGGAAACCGACGAGAGGACCTCAGCTCCAAGGTGTGTGGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000627631.1
CDS-3UTR CAA 90 bp CCATGGTGGGGTTGTCACTCGGCTCCGGGTAGACAATACCATCTTCAATGGGTGGATCTCAACAGATTCTaGATCCGGCTGGTAATGGTT +
Preference number: 5 (lower is better)
Translates to: PWWGCHSAPGRQYHLQWVDLNRF*IRLVMV
Trigger: AACCATTACCAGCCGGATCAAGAATCTGTTGAGATC...CACCCATTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCCACCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CTTCCTCTTCTTCATCACCCTCAGCTGGCTCTTCAAGGTCTGAGGAGATGCCATAGGATGTGGTGCTGTTaGTGTTTCCGGGGATTGAAC +
Preference number: 5 (lower is better)
Translates to: LPLLHHPQLALQGLRRCHRMWCC*CFRGLN
Trigger: GTTCAATCCCCGGAAACACAAACAGCACCACATCCT...ATGGCATCTCCTCAGACCTTGAAGAGCCAGCTGAGGGTGATGAAGAAGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CCAGAGTACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAGGATGTGGTGCTGTTaGTGTTTCCGGGGATTGAAC +
Preference number: 5 (lower is better)
Translates to: PEYPVYAPPQGANPCSNFRMWCC*CFRGLN
Trigger: GTTCAATCCCCGGAAACACAAACAGCACCACATCCT...GAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGTACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAACATCAGTGAATAGGTaGTTCCGTAGCTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: GCSLESLEHSFTWDRLPETSVNR*FRSSPS
Trigger: GCTGGGAGAGCTACGGAACAACCTATTCACTGATGT...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CAA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGACATCAGTGAATAGGTaGTTCCGTAGCTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWTSVNR*FRSSPS
Trigger: GCTGGGAGAGCTACGGAACAACCTATTCACTGATGT...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCCACAGGCGGATGGTGTaGTCTGAGGAGCAGGTAATA +
Preference number: 5 (lower is better)
Translates to: TLCMLHHRELIPAVISNGHRRMV*SEEQVI
Trigger: TATTACCTGCTCCTCAGACAACACCATCCGCCTGTG...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCTGTACTTGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGCTGATCATGCGGACTaGCCCATCACTGGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: SVLATGIVKRYSETLTSLADHAD*PITGCK
Trigger: TTTGCAGCCAGTGATGGGCAAGTCCGCATGATCAGC...CAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CAGCAGCCAGCCAGATACTCTAGCAACCAACACTCAACAGCGTGCTGTGCAGGTAAAATGGAGAGATTCTaGTCAGAACAGCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: QQPARYSSNQHSTACCAGKMERF*SEQLVA
Trigger: TGCCACCAGCTGTTCTGACAAGAATCTCTCCATTTT...ACCTGCACAGCACGCTGTTGAGTGTTGGTTGCTAGAGTATCTGGCTGGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GTGGAATGTGCGGGCTCAGGTCCAAATACCAACTCAAGTCTCCTGATGGCTGGGAAAATGGAGAGATTCTaGTCAGAACAGCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: VECAGSGPNTNSSLLMAGKMERF*SEQLVA
Trigger: TGCCACCAGCTGTTCTGACAAGAATCTCTCCATTTT...CCCAGCCATCAGGAGACTTGAGTTGGTATTTGGACCTGAGCCCGCACATTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGTGCATTCCATGGGGTaGGGAGTCTTCTCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFVHSMG*GVFSGG
Trigger: ACCCCCTGAGAAGACTCCCAACCCCATGGAATGCAC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000456763.6
ENST00000457542.7
CDS-3UTR CAA 90 bp GGCTGTGGACACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTGGAGCATTCATTCACTaGGGACAGGCTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: GCGHQESRIWVHLVYCTPGAFIH*GQASRT
Trigger: AGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCC...AGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTGTCCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGGCTGGGAAGGCTGCTTaGCCTCTGAACACTGCTCCC +
Preference number: 5 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWAGKAA*PLNTAP
Trigger: GGGAGCAGTGTTCAGAGGCAAAGCAGCCTTCCCAGC...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CTCCTTCTACCTAAACCAGGTGTCCTATGGGCTATCTCGTATCAGCTAGGCTGTAGGATGTGGTGCTGTTaGTGTTTCCGGGGATTGAAC +
Preference number: 5 (lower is better)
Translates to: LLLPKPGVLWAISYQLGCRMWCC*CFRGLN
Trigger: GTTCAATCCCCGGAAACACAAACAGCACCACATCCT...ACAGCCTAGCTGATACGAGATAGCCCATAGGACACCTGGTTTAGGTAGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCAGGATGTGGTGCTGTTaGTGTTTCCGGGGATTGAAC +
Preference number: 5 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSRMWCC*CFRGLN
Trigger: GTTCAATCCCCGGAAACACAAACAGCACCACATCCT...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GCAGTAGGGCCCAGAAAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGACAGAAGATGTAGTCTaGGCTCACAGAGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: AVGPRKTFPQLFNCLTTWTEDVV*AHRDAV
Trigger: CACTGCATCTCTGTGAGCCAAGACTACATCTTCTGT...CCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TGCAACAGGAATCGTGAAGAGATACTCCGAGACTCTGACCTCTCTGGGACCTGCAAAATGGAGAGATTCTaGTCAGAACAGCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: CNRNREEILRDSDLSGTCKMERF*SEQLVA
Trigger: TGCCACCAGCTGTTCTGACAAGAATCTCTCCATTTT...GCAGGTCCCAGAGAGGTCAGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GGCTGCAGTTTGGAATCGCTGGAGCATTCATTCACTTGGGACAGGCTTCCAGAAGATCTCAACAGATTCTaGATCCGGCTGGTAATGGTT +
Preference number: 5 (lower is better)
Translates to: GCSLESLEHSFTWDRLPEDLNRF*IRLVMV
Trigger: AACCATTACCAGCCGGATCAAGAATCTGTTGAGATC...TTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCCAGCGATTCCAAACTGCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000505373.5
ENST00000512970.5
ENST00000514566.5
CDS-3UTR CAA 90 bp ACCCTGTGTATGCTCCACCACAGGGAGCTAATCCCTGCAGTAATTTCAAATGGCTTACTCCTGCGCAGTTaGATGGATGGAGATCTCAAC +
Preference number: 5 (lower is better)
Translates to: TLCMLHHRELIPAVISNGLLLRS*MDGDLN
Trigger: GTTGAGATCTCCATCCATCAAACTGCGCAGGAGTAA...GCCATTTGAAATTACTGCAGGGATTAGCTCCCTGTGGTGGAGCATACACAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCTTGTGTTTCCGGGGATaGAACAACACAACCACACAC +
Preference number: 5 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSLCFRG*NNTTTH
Trigger: GTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACAA...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp ATGGGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTTGTGTTTCCGGGGATaGAACAACACAACCACACAC +
Preference number: 5 (lower is better)
Translates to: MGYLVSARLWTPRIQNLGLCFRG*NNTTTH
Trigger: GTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACAA...ACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAAGGATGTGGTGCTGTTaGTGTTTCCGGGGATTGAAC +
Preference number: 5 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRIRMWCC*CFRGLN
Trigger: GTTCAATCCCCGGAAACACAAACAGCACCACATCCT...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCATCGAGATACCAGAATTaGATGTGTCGGTTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSSRYQN*MCRLPA
Trigger: TGCAGGCAACCGACACATCAAATTCTGGTATCTCGA...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp AAAACCTTTCCTCAACTCTTCAACTGCCTCACGACATGGTCCCACTCTACCTCCTTCACCTTTGAGGTCTaGCTGTCATCGAGATACCAG +
Preference number: 5 (lower is better)
Translates to: KTFPQLFNCLTTWSHSTSFTFEV*LSSRYQ
Trigger: CTGGTATCTCGATGACAGCAAGACCTCAAAGGTGAA...GGAGGTAGAGTGGGACCATGTCGTGAGGCAGTTGAAGAGTTGAGGAAAGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GGCTATCTCGTATCAGCTAGGCTGTGGACACCAAGAATCCAGAATCTGGGTTCATTCACCTTTGAGGTCTaGCTGTCATCGAGATACCAG +
Preference number: 5 (lower is better)
Translates to: GYLVSARLWTPRIQNLGSFTFEV*LSSRYQ
Trigger: CTGGTATCTCGATGACAGCAAGACCTCAAAGGTGAA...TGAACCCAGATTCTGGATTCTTGGTGTCCACAGCCTAGCTGATACGAGATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp CTTGCCCACTTTCTTGGGGTCCCTCACATCCCAAACATAAATGCTATGATCGTTTCCAGAACTCAGAGTTaGCGTTCCATACGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: LAHFLGVPHIPNINAMIVSRTQS*RSIRRS
Trigger: GGAACGGCGTATGGAACGCAAACTCTGAGTTCTGGA...AACGATCATAGCATTTATGTTTGGGATGTGAGGGACCCCAAGAAAGTGGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505373.5
CDS-3UTR CAA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAGGAGCATTCATTCACTaGGGACAGGCTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRIGAFIH*GQASRT
Trigger: AGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCC...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp CACCAAGAATCCAGAATCTGGGTTCACTTAGTGTACTGCACCCCTTTTCTGCTCGTTTTCCTGGAACTGTaGAGGATGTGGTGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: HQESRIWVHLVYCTPFLLVFLEL*RMWCCL
Trigger: CAAACAGCACCACATCCTCAACAGTTCCAGGAAAAC...GAGCAGAAAAGGGGTGCAGTACACTAAGTGAACCCAGATTCTGGATTCTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp GCAGGTTCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATATTCACCTTTGAGGTCTaGCTGTCATCGAGATACCAG +
Preference number: 5 (lower is better)
Translates to: AGSRSWAKTPSSCDNNRIFTFEV*LSSRYQ
Trigger: CTGGTATCTCGATGACAGCAAGACCTCAAAGGTGAA...TATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGGAGCATTCATTCACTaGGGACAGGCTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFGAFIH*GQASRT
Trigger: AGTTCTGGAAGCCTGTCCCAAGTGAATGAATGCTCC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCTTACTCCTGCGCAGTTaGATGGATGGAGATCTCAAC +
Preference number: 5 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFLLLRS*MDGDLN
Trigger: GTTGAGATCTCCATCCATCAAACTGCGCAGGAGTAA...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGTTTTCCTGGAACTGTaGAGGATGTGGTGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFVFLEL*RMWCCL
Trigger: CAAACAGCACCACATCCTCAACAGTTCCAGGAAAAC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TACATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCACCTTTGAGGTCTaGCTGTCATCGAGATACCAG +
Preference number: 5 (lower is better)
Translates to: YILTYPLTSATYLSHLPLFTFEV*LSSRYQ
Trigger: CTGGTATCTCGATGACAGCAAGACCTCAAAGGTGAA...AAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCGATCTCAACAGATTCTaGATCCGGCTGGTAATGGTT +
Preference number: 5 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFDLNRF*IRLVMV
Trigger: AACCATTACCAGCCGGATCAAGAATCTGTTGAGATC...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS-3UTR CAA 90 bp TCCAGATCTTGGGCAAAGACCCCTTCCTCTTGTGACAATAATCGGATAATATGGTCGAGATACCAGAATTaGATGTGTCGGTTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: SRSWAKTPSSCDNNRIIWSRYQN*MCRLPA
Trigger: TGCAGGCAACCGACACATCAAATTCTGGTATCTCGA...CCATATTATCCGATTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000512970.5
CDS-3UTR CAA 90 bp ATTCTAACTTATCCCCTCACCTCTGCCACTTACCTGTCCCATCTACCACTTTTCAAAATGGAGAGATTCTaGTCAGAACAGCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: ILTYPLTSATYLSHLPLFKMERF*SEQLVA
Trigger: TGCCACCAGCTGTTCTGACAAGAATCTCTCCATTTT...GAAAAGTGGTAGATGGGACAGGTAAGTGGCAGAGGTGAGGGGATAAGTTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000514566.5
CDS TCA 90 bp AGAACAGAGAGCGTCTATATTTCCCTTACCCAGCTTTCCCTAATGTaGACATCTTACATAACGATAGTGCAATTATCAAAACTAGGAAAT +
Preference number: 5 (lower is better)
Translates to: RTESVYISLTQLSLM*TSYITIVQLSKLGN
Trigger: ATTTCCTAGTTTTGATAATTGCACTATCGTTATGTAAGATGTTCACATTAGGGAAAGCTGGGTAAGGGAAATATAGACGCTCTCTGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503526.1
CDS CCA 72 bp GGAGGCCGCCGAGACCACCAGGGATTTCCGCAGGCCTaGACACCTGCGCTAGCGCCGGCGGGGACGCGGCGG +
Preference number: 6 (lower is better)
Translates to: GGRRDHQGFPQA*TPALAPAGTRR
Trigger: CCGCCGCGTCCCCGCCGGCGCTAGCGCAGGTGTCCAGGCCTGCGGAAATCCCTGGTGGTCTCGGCGGCCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510535.1
CDS CCA 72 bp CCACGCCCGCCAGAGGCGTTTAACTGGCGAGATGGATaGGATGGGCCCCAGTTGGTCTCGTGGACGATCTGG +
Preference number: 6 (lower is better)
Translates to: PRPPEAFNWRDG*DGPQLVSWTIW
Trigger: CCAGATCGTCCACGAGACCAACTGGGGCCCATCCCATCCATCTCGCCAGTTAAACGCCTCTGGCGGGCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510535.1
CDS GCA 72 bp CCTAGGACCGCAGCTCTCTGCGGAGGCCAGGACACCTaGCCTCTTTACAGTACTGCCAGCCCTCTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: PRTAALCGGQDT*PLYSTASPLPH
Trigger: GTGAGGAAGAGGGCTGGCAGTACTGTAAAGAGGGCAGGTGTCCTGGCCTCCGCAGAGAGCTGCGGTCCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507147.1
CDS CCA 72 bp AGAGATGCAGTGGGCCACTGTGGTCTGTGGGCAGAGTaGCTCAGCTCAGCAAGGCCACCTGCCCACTCAGTC +
Preference number: 6 (lower is better)
Translates to: RDAVGHCGLWAE*LSSARPPAHSV
Trigger: GACTGAGTGGGCAGGTGGCCTTGCTGAGCTGAGCCACTCTGCCCACAGACCACAGTGGCCCACTGCATCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502292.5
CDS CCA 72 bp TTGGCTCACAGAGATGCAGTGGGCCACTGTGGTCTGTaGGCAGAGTGGCTCAGCTCAGCAAGGCCACCTGCC +
Preference number: 6 (lower is better)
Translates to: LAHRDAVGHCGL*AEWLSSARPPA
Trigger: GGCAGGTGGCCTTGCTGAGCTGAGCCACTCTGCCCACAGACCACAGTGGCCCACTGCATCTCTGTGAGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502292.5
CDS GCA 72 bp CTGCGGAGGCCAGGACACCTGCCCTCTTTACAGTACTaGCAGCCCTCTTCCTCACTCACCTCTCCAGTGACC +
Preference number: 6 (lower is better)
Translates to: LRRPGHLPSLQY*QPSSSLTSPVT
Trigger: GGTCACTGGAGAGGTGAGTGAGGAAGAGGGCTGGCAGTACTGTAAAGAGGGCAGGTGTCCTGGCCTCCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507147.1
CDS GCA 72 bp CCTAGGAGAGTACAGGGGACGCCTCCAGCACCTCCTTaGTCTTTGGGCCTACTCCTCAGCCCAGACAGCATC +
Preference number: 6 (lower is better)
Translates to: PRRVQGTPPAPP*SLGLLLSPDSI
Trigger: GATGCTGTCTGGGCTGAGGAGTAGGCCCAAAGAGCAAGGAGGTGCTGGAGGCGTCCCCTGTACTCTCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502292.5
ENST00000505061.5
CDS CCA 72 bp GAGTACAGGGGACGCCTCCAGCACCTCCTTGCTCTTTaGGCCTACTCCTCAGCCCAGACAGCATCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: EYRGRLQHLLAL*AYSSAQTASGS
Trigger: TGAGCCAGATGCTGTCTGGGCTGAGGAGTAGGCCCAAAGAGCAAGGAGGTGCTGGAGGCGTCCCCTGTACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502292.5
ENST00000505061.5
CDS CAA 72 bp GCCCCCACACCCAACTGCCACAGACCCAGTGCCTTCTaGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: APTPNCHRPSAF*VLLARTGSAGS
Trigger: ACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGGTCTGTGGCAGTTGGGTGTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505061.5
CDS CAA 90 bp GCCCCCACACCCAACTGCCACAGACCCAGTGCCTTCTTGGTACTCTaGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCAGTCCCCTCA +
Preference number: 6 (lower is better)
Translates to: APTPNCHRPSAFLVL*ARTGSAGSSSSVPS
Trigger: TGAGGGGACTGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGGTCTGTGGCAGTTGGGTGTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505061.5
CDS CAA 90 bp GGCCTGTCTGCCCCCACACCCAACTGCCACAGACCCAGTGCCTTCTaGGTACTCTTGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: GLSAPTPNCHRPSAF*VLLARTGSAGSSSS
Trigger: TGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGGTCTGTGGCAGTTGGGTGTGGGGGCAGACAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505061.5
CDS CAA 90 bp CCGCCAGAGGCGTTTAACTGGCGAGATGGATGGGATGGGCCCCAGTaGGTCTCGTGGACGATCTGGTTCCCGTTAATGCCCAACTGTTCC +
Preference number: 6 (lower is better)
Translates to: PPEAFNWRDGWDGPQ*VSWTIWFPLMPNCS
Trigger: GGAACAGTTGGGCATTAACGGGAACCAGATCGTCCACGAGACCAACTGGGGCCCATCCCATCCATCTCGCCAGTTAAACGCCTCTGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510535.1
CDS GCA 72 bp AGGCCAAGGCCTAGGGACCAGTTCCCAGTAACAAGGTaGAATAGCTGTGGGGATGGGGGCACTGAGGGTGAA +
Preference number: 6 (lower is better)
Translates to: RPRPRDQFPVTR*NSCGDGGTEGE
Trigger: TTCACCCTCAGTGCCCCCATCCCCACAGCTATTGCACCTTGTTACTGGGAACTGGTCCCTAGGCCTTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505061.5
CDS CCA 72 bp GGATGGGATGGGCCCCAGTTGGTCTCGTGGACGATCTaGTTCCCGTTAATGCCCAACTGTTCCCATGGCAAC +
Preference number: 6 (lower is better)
Translates to: GWDGPQLVSWTI*FPLMPNCSHGN
Trigger: GTTGCCATGGGAACAGTTGGGCATTAACGGGAACCAGATCGTCCACGAGACCAACTGGGGCCCATCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510535.1
CDS CCA 72 bp TGGCGAGATGGATGGGATGGGCCCCAGTTGGTCTCGTaGACGATCTGGTTCCCGTTAATGCCCAACTGTTCC +
Preference number: 6 (lower is better)
Translates to: WRDGWDGPQLVS*TIWFPLMPNCS
Trigger: GGAACAGTTGGGCATTAACGGGAACCAGATCGTCCACGAGACCAACTGGGGCCCATCCCATCCATCTCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510535.1
CDS CAA 72 bp GCGTTTAACTGGCGAGATGGATGGGATGGGCCCCAGTaGGTCTCGTGGACGATCTGGTTCCCGTTAATGCCC +
Preference number: 6 (lower is better)
Translates to: AFNWRDGWDGPQ*VSWTIWFPLMP
Trigger: GGGCATTAACGGGAACCAGATCGTCCACGAGACCAACTGGGGCCCATCCCATCCATCTCGCCAGTTAAACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510535.1
CDS GCA 72 bp CACAGCCACAGAAGATGTAGTCTTGGCTCACAGAGATaGAGTGGGCCACTGTGGTCTGTGGGCAGAGTGGCT +
Preference number: 6 (lower is better)
Translates to: HSHRRCSLGSQR*SGPLWSVGRVA
Trigger: AGCCACTCTGCCCACAGACCACAGTGGCCCACTGCATCTCTGTGAGCCAAGACTACATCTTCTGTGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502292.5
CDS CAA 72 bp CTGGGGACGGAGGTACTTACCCTCAGCTCCACCCACTaGTCCAAAAGCCTTCGATCACTGAACTCGCACAGC +
Preference number: 6 (lower is better)
Translates to: LGTEVLTLSSTH*SKSLRSLNSHS
Trigger: GCTGTGCGAGTTCAGTGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAGGGTAAGTACCTCCGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502292.5
CDS GCA 72 bp GGTCACCTTGGAGCTGAGGTCCTCTCGTCGGTTTCCTaGCTTACTCCTGCGCAGTTTGATGGATGGAGATCT +
Preference number: 6 (lower is better)
Translates to: GHLGAEVLSSVS*LTPAQFDGWRS
Trigger: AGATCTCCATCCATCAAACTGCGCAGGAGTAAGGCAGGAAACCGACGAGAGGACCTCAGCTCCAAGGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000502292.5
ENST00000505061.5
ENST00000510535.1
ENST00000512970.5
ENST00000514566.5
CDS GCA 72 bp AGGGGGCCTCTGTACCTGAGTGGGCGGGTCTGTACTTaGAACAGGAATCGTGAAGAGATACTCCGAGACTCT +
Preference number: 6 (lower is better)
Translates to: RGPLYLSGRVCT*NRNREEILRDS
Trigger: AGAGTCTCGGAGTATCTCTTCACGATTCCTGTTGCAAGTACAGACCCGCCCACTCAGGTACAGAGGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506301.1
CDS CAA 72 bp CCCAACTGCCACAGACCCAGTGCCTTCTTGGTACTCTaGGCAAGGACGGGCAGTGCTGGAAGTTCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: PNCHRPSAFLVL*ARTGSAGSSSS
Trigger: TGAAGAAGAACTTCCAGCACTGCCCGTCCTTGCCAAGAGTACCAAGAAGGCACTGGGTCTGTGGCAGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505061.5
CDS CAA 72 bp CAAAGCTCCCTGAATGGTTCTGATGGGCAGCCGGCATaGAGAGCCACTACCACTCAGGTCTATTTCTGCCCC +
Preference number: 6 (lower is better)
Translates to: QSSLNGSDGQPA*RATTTQVYFCP
Trigger: GGGGCAGAAATAGACCTGAGTGGTAGTGGCTCTCAATGCCGGCTGCCCATCAGAACCATTCAGGGAGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507762.5
CDS TCA 72 bp CTTGGCTCACAGAGATGCAGTGGGCCACTGTGGTTGTaGAGCTGTCTATGTTCCTCAGCTCCACCCACTTGT +
Preference number: 6 (lower is better)
Translates to: LGSQRCSGPLWL*SCLCSSAPPTC
Trigger: ACAAGTGGGTGGAGCTGAGGAACATAGACAGCTTCACAACCACAGTGGCCCACTGCATCTCTGTGAGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456763.6
CDS GCA 72 bp ACACACCTTGGAGCTGAGGTCCTCTCGTCGGTTTCCTaGCTTACTCCTGCGCAGTTTGATGGATGGAGATCT +
Preference number: 6 (lower is better)
Translates to: THLGAEVLSSVS*LTPAQFDGWRS
Trigger: AGATCTCCATCCATCAAACTGCGCAGGAGTAAGGCAGGAAACCGACGAGAGGACCTCAGCTCCAAGGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000627631.1
CDS GCA 72 bp AGACAGCATCTGGCTCATCCAAAACTTCTGCATGACTaGTGGGAATGCAGAGAGAGGCCCAAGTGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: RQHLAHPKLLHD*WECRERPKWGR
Trigger: TCTGCCCCACTTGGGCCTCTCTCTGCATTCCCAGCAGTCATGCAGAAGTTTTGGATGAGCCAGATGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502292.5
ENST00000505061.5
CDS CAA 90 bp GGCCTTGGTGGCTACTCCCAGCTTCAGCACCTCACCTTTGAGGTCTaGCTGTCATCGAGATACCAGAATTTGATGTGTCGGTTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: GLGGYSQLQHLTFEV*LSSRYQNLMCRLPA
Trigger: TGCAGGCAACCGACACATCAAATTCTGGTATCTCGATGACAGCAAGACCTCAAAGGTGAGGTGCTGAAGCTGGGAGTAGCCACCAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502292.5
ENST00000505061.5
ENST00000515164.1
CDS CAA 90 bp GAAACCCTTCTGCCTAGCGAAGTCTGCAGCTTTTACCTCTGGGTATaGCTCTCACCATTTCCCTCATCCCCACCTTCTAGCCCTGCACAG +
Preference number: 6 (lower is better)
Translates to: ETLLPSEVCSFYLWV*LSPFPSSPPSSPAQ
Trigger: CTGTGCAGGGCTAGAAGGTGGGGATGAGGGAAATGGTGAGAGCAATACCCAGAGGTAAAAGCTGCAGACTTCGCTAGGCAGAAGGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510535.1
CDS CCA 72 bp TGCTCTTTGGGCCTACTCCTCAGCCCAGACAGCATCTaGCTCATCCAAAACTTCTGCATGACTGCTGGGAAT +
Preference number: 6 (lower is better)
Translates to: CSLGLLLSPDSI*LIQNFCMTAGN
Trigger: ATTCCCAGCAGTCATGCAGAAGTTTTGGATGAGCCAGATGCTGTCTGGGCTGAGGAGTAGGCCCAAAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502292.5
ENST00000505061.5
CDS CCA 72 bp ACCCTTCTGCCTAGCGAAGTCTGCAGCTTTTACCTCTaGGTATTGCTCTCACCATTTCCCTCATCCCCACCT +
Preference number: 6 (lower is better)
Translates to: TLLPSEVCSFYL*VLLSPFPSSPP
Trigger: AGGTGGGGATGAGGGAAATGGTGAGAGCAATACCCAGAGGTAAAAGCTGCAGACTTCGCTAGGCAGAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510535.1
CDS CAA 90 bp GAGCTGAGGTCCTCTCGTCGGTTTCCTGCCTTACTCCTGCGCAGTTaGATGGATGGAGATCTCAACAGATTCTTGATCCGGCTGGTAATG +
Preference number: 6 (lower is better)
Translates to: ELRSSRRFPALLLRS*MDGDLNRFLIRLVM
Trigger: CATTACCAGCCGGATCAAGAATCTGTTGAGATCTCCATCCATCAAACTGCGCAGGAGTAAGGCAGGAAACCGACGAGAGGACCTCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000502292.5
ENST00000505373.5
ENST00000510535.1
ENST00000512970.5
ENST00000514566.5
ENST00000627631.1
CDS CAA 90 bp AGGGCAGTGATGGTTTTCCTGGAACTGTTGAGGATGTGGTGCTGTTaGTGTTTCCGGGGATTGAACAACACAACCACACACCCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: RAVMVFLELLRMWCC*CFRGLNNTTTHPAG
Trigger: CCCAGCAGGGTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACAAACAGCACCACATCCTCAACAGTTCCAGGAAAACCATCACTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000502292.5
ENST00000505061.5
ENST00000507762.5
ENST00000510535.1
ENST00000512970.5
ENST00000514566.5
CDS CAA 72 bp CTGCGCAGTTTGATGGATGGAGATCTCAACAGATTCTaGATCCGGCTGGTAATGGTTGACCCTTCCACAGCC +
Preference number: 6 (lower is better)
Translates to: LRSLMDGDLNRF*IRLVMVDPSTA
Trigger: GGCTGTGGAAGGGTCAACCATTACCAGCCGGATCAAGAATCTGTTGAGATCTCCATCCATCAAACTGCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000502292.5
ENST00000505373.5
ENST00000510535.1
ENST00000512970.5
ENST00000514566.5
ENST00000627631.1
CDS CAA 72 bp TCCTCTCGTCGGTTTCCTGCCTTACTCCTGCGCAGTTaGATGGATGGAGATCTCAACAGATTCTTGATCCGG +
Preference number: 6 (lower is better)
Translates to: SSRRFPALLLRS*MDGDLNRFLIR
Trigger: CCGGATCAAGAATCTGTTGAGATCTCCATCCATCAAACTGCGCAGGAGTAAGGCAGGAAACCGACGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000502292.5
ENST00000505373.5
ENST00000510535.1
ENST00000512970.5
ENST00000514566.5
ENST00000627631.1
CDS CAA 72 bp GTTGTGAAGCTGTCTATGTTCCTCAGCTCCACCCACTaGTCCAAAAGCCTTCGATCACTGAACTCGCACAGC +
Preference number: 6 (lower is better)
Translates to: VVKLSMFLSSTH*SKSLRSLNSHS
Trigger: GCTGTGCGAGTTCAGTGATCGAAGGCTTTTGGACAAGTGGGTGGAGCTGAGGAACATAGACAGCTTCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456763.6
CDS CAA 72 bp CTGTTGAGGATGTGGTGCTGTTTGTGTTTCCGGGGATaGAACAACACAACCACACACCTTGGAGCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: LLRMWCCLCFRG*NNTTTHLGAEV
Trigger: GACCTCAGCTCCAAGGTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACAAACAGCACCACATCCTCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000627631.1
CDS CAA 72 bp GGCTACTCCCAGCTTCAGCACCTCACCTTTGAGGTCTaGCTGTCATCGAGATACCAGAATTTGATGTGTCGG +
Preference number: 6 (lower is better)
Translates to: GYSQLQHLTFEV*LSSRYQNLMCR
Trigger: CCGACACATCAAATTCTGGTATCTCGATGACAGCAAGACCTCAAAGGTGAGGTGCTGAAGCTGGGAGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502292.5
ENST00000505061.5
ENST00000515164.1
CDS CAA 90 bp GCCTTACTCCTGCGCAGTTTGATGGATGGAGATCTCAACAGATTCTaGATCCGGCTGGTAATGGTTGACCCTTCCACAGCCATTATGACG +
Preference number: 6 (lower is better)
Translates to: ALLLRSLMDGDLNRF*IRLVMVDPSTAIMT
Trigger: CGTCATAATGGCTGTGGAAGGGTCAACCATTACCAGCCGGATCAAGAATCTGTTGAGATCTCCATCCATCAAACTGCGCAGGAGTAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000502292.5
ENST00000505373.5
ENST00000510535.1
ENST00000512970.5
ENST00000514566.5
CDS CAA 90 bp AGGGCAGTGATGGTTTTCCTGGAACTGTTGAGGATGTGGTGCTGTTaGTGTTTCCGGGGATTGAACAACACAACCACACACCTTGGAGCT +
Preference number: 6 (lower is better)
Translates to: RAVMVFLELLRMWCC*CFRGLNNTTTHLGA
Trigger: AGCTCCAAGGTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACAAACAGCACCACATCCTCAACAGTTCCAGGAAAACCATCACTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505373.5
ENST00000627631.1
CDS CAA 90 bp AGGGCAGTGATGGTTTTCCTGGAACTGTTGAGGATGTGGTGCTGTTaGTGTTTCCGGGGATTGAACAACACAACCACACACCTGAGGAGA +
Preference number: 6 (lower is better)
Translates to: RAVMVFLELLRMWCC*CFRGLNNTTTHLRR
Trigger: TCTCCTCAGGTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACAAACAGCACCACATCCTCAACAGTTCCAGGAAAACCATCACTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507147.1
ENST00000515164.1
CDS TCA 72 bp ATGAGAAAGAGAGGAAGGTGCAGGCACCACTTACTGTaGAGCTGTCTATGTTCTGAGCGGAAGAGGAAAGCA +
Preference number: 6 (lower is better)
Translates to: MRKRGRCRHHLL*SCLCSERKRKA
Trigger: TGCTTTCCTCTTCCGCTCAGAACATAGACAGCTTCACAGTAAGTGGTGCCTGCACCTTCCTCTCTTTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502292.5
CDS CCA 72 bp TCGGTTTCCTGCCTTACTCCTGCGCAGTTTGATGGATaGAGATCTCAACAGATTCTTGATCCGGCTGGTAAT +
Preference number: 6 (lower is better)
Translates to: SVSCLTPAQFDG*RSQQILDPAGN
Trigger: ATTACCAGCCGGATCAAGAATCTGTTGAGATCTCCATCCATCAAACTGCGCAGGAGTAAGGCAGGAAACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000456763.6
ENST00000457542.7
ENST00000502292.5
ENST00000505373.5
ENST00000510535.1
ENST00000512970.5
ENST00000514566.5
ENST00000627631.1
CDS CCA 72 bp AAGCACGCTTCCTTCACCAGCAGGATCAGCACTCTCTaGGAACTTGTTACAAATGCACATTTCAGACTCCCA +
Preference number: 6 (lower is better)
Translates to: KHASFTSRISTL*ELVTNAHFRLP
Trigger: TGGGAGTCTGAAATGTGCATTTGTAACAAGTTCCCAGAGAGTGCTGATCCTGCTGGTGAAGGAAGCGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507762.5
CDS CAA 72 bp CTTCCTTCACCAGCAGGATCAGCACTCTCTGGGAACTaGTTACAAATGCACATTTCAGACTCCCATCCCAGA +
Preference number: 6 (lower is better)
Translates to: LPSPAGSALSGN*LQMHISDSHPR
Trigger: TCTGGGATGGGAGTCTGAAATGTGCATTTGTAACAAGTTCCCAGAGAGTGCTGATCCTGCTGGTGAAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507762.5
CDS TCA 72 bp AGCGTCTATATTTCCCTTACCCAGCTTTCCCTAATGTaGACATCTTACATAACGATAGTGCAATTATCAAAA +
Preference number: 6 (lower is better)
Translates to: SVYISLTQLSLM*TSYITIVQLSK
Trigger: TTTTGATAATTGCACTATCGTTATGTAAGATGTTCACATTAGGGAAAGCTGGGTAAGGGAAATATAGACGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503526.1