RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAPKAPK5 (Homo sapiens)

Ensembl gene IDs: ENSG00000089022

Ensembl transcript IDs: ENST00000546394.1, ENST00000547067.1, ENST00000547305.1, ENST00000547915.1, ENST00000549875.1, ENST00000550735.7, ENST00000551404.6, ENST00000552111.5, ENST00000553053.5, ENST00000602983.1

Found 514 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGGCAGCACATTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTaGTCCAGCACTCCCTCGATGGTGAGTCTCTCCTCCGGTTTGACC +
Preference number: 1 (lower is better)
Translates to: EGSTLSRASVELSQG*SSTPSMVSLSSGLT
Trigger: GGTCAAACCGGAGGAGAGACTCACCATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAATGTGCTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
3UTR TCA 90 bp GGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTaGGAAAGGCCTGGCCCATATTCTGTCCAGGGTGATGCCCAACGA +
Preference number: 1 (lower is better)
Translates to: GRIQQLPQNRLSRHH*ERPGPYSVQGDAQR
Trigger: TCGTTGGGCATCACCCTGGACAGAATATGGGCCAGGCCTTTCTCAGTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 90 bp CCCCTAGTGAAGCTGTTGGCCAGAGCAATGACATCCACTACTGTCTaGACCGTCTCATTGACGTTACTGCCCCACATCTGGAACCGCTGG +
Preference number: 1 (lower is better)
Translates to: PLVKLLARAMTSTTV*TVSLTLLPHIWNRW
Trigger: CCAGCGGTTCCAGATGTGGGGCAGTAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAGCTTCACTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 90 bp CCGAGCTCATGGGCCATCAGGGCTGCAAACAACAGCACATCTTCATaGTGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCA +
Preference number: 1 (lower is better)
Translates to: PSSWAIRAANNSTSS*WKDSTAAAKPLEQA
Trigger: TGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAGATGTGCTGTTGTTTGCAGCCCTGATGGCCCATGAGCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 90 bp GTCTGGACCGTCTCATTGACGTTACTGCCCCACATCTGGAACCGCTaGTTGTTGACCACGACAAACATCTCCACGTACTTTTTGTGTGAC +
Preference number: 1 (lower is better)
Translates to: VWTVSLTLLPHIWNR*LLTTTNISTYFLCD
Trigger: GTCACACAAAAAGTACGTGGAGATGTTTGTCGTGGTCAACAACCAGCGGTTCCAGATGTGGGGCAGTAACGTCAATGAGACGGTCCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 90 bp TCCACTACTGTCTGGACCGTCTCATTGACGTTACTGCCCCACATCTaGAACCGCTGGTTGTTGACCACGACAAACATCTCCACGTACTTT +
Preference number: 1 (lower is better)
Translates to: STTVWTVSLTLLPHI*NRWLLTTTNISTYF
Trigger: AAAGTACGTGGAGATGTTTGTCGTGGTCAACAACCAGCGGTTCCAGATGTGGGGCAGTAACGTCAATGAGACGGTCCAGACAGTAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 90 bp CGGTTTGACCTTCAGGAGCTTCCTCACAACATCTTTGGCCATCTCTaGGATCTGACTCCACTCTTCCTCTGGGAACTCAAAACTGCCTGT +
Preference number: 1 (lower is better)
Translates to: RFDLQELPHNIFGHL*DLTPLFLWELKTAC
Trigger: ACAGGCAGTTTTGAGTTCCCAGAGGAAGAGTGGAGTCAGATCTCAGAGATGGCCAAAGATGTTGTGAGGAAGCTCCTGAAGGTCAAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
3UTR TCA 90 bp CTGACACTCCTTCTATGTAGCCTTCATAGTGGCAGTCATGTGAGATaGAAGGCGATTCTTGCCCCAGGAGGCCATTGTGGTAACTGTAGA +
Preference number: 1 (lower is better)
Translates to: LTLLLCSLHSGSHVR*KAILAPGGHCGNCR
Trigger: TCTACAGTTACCACAATGGCCTCCTGGGGCAAGAATCGCCTTTCATCTCACATGACTGCCACTATGAAGGCTACATAGAAGGAGTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 90 bp ACCTTCAGGAGCTTCCTCACAACATCTTTGGCCATCTCTGAGATCTaGCTCCACTCTTCCTCTGGGAACTCAAAACTGCCTGTCATGATC +
Preference number: 1 (lower is better)
Translates to: TFRSFLTTSLAISEI*LHSSSGNSKLPVMI
Trigger: GATCATGACAGGCAGTTTTGAGTTCCCAGAGGAAGAGTGGAGTCAGATCTCAGAGATGGCCAAAGATGTTGTGAGGAAGCTCCTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
3UTR GCA 90 bp ATGGGAGTATATAAAGGATCAGGATCAAAGTTCAGTTCCTCCAACTaGCCTAACATAAAAACAAAGTGTGGGGCCCGGGCACGGTGGCTC +
Preference number: 1 (lower is better)
Translates to: MGVYKGSGSKFSSSN*PNIKTKCGARARWL
Trigger: GAGCCACCGTGCCCGGGCCCCACACTTTGTTTTTATGTTAGGGCAGTTGGAGGAACTGAACTTTGATCCTGATCCTTTATATACTCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 90 bp TTGCCAGCTAGTAGACACCACAGGAGACTCACGCTTGATGTGCCATaGTGTATAACACATGTTCAAACCGTCTTGAAGAGTCCATGGGCT +
Preference number: 1 (lower is better)
Translates to: LPASRHHRRLTLDVP*CITHVQTVLKSPWA
Trigger: AGCCCATGGACTCTTCAAGACGGTTTGAACATGTGTTATACACCATGGCACATCAAGCGTGAGTCTCCTGTGGTGTCTACTAGCTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 90 bp ACAGGCAGTCACACACATACAGGGCATACTAACCAAATGTCACCCTaGAGATTCAGGGTGGAGGAATTACTCAGCACAGTGGAGGAGTTA +
Preference number: 1 (lower is better)
Translates to: TGSHTHTGHTNQMSP*RFRVEELLSTVEEL
Trigger: TAACTCCTCCACTGTGCTGAGTAATTCCTCCACCCTGAATCTTCAGGGTGACATTTGGTTAGTATGCCCTGTATGTGTGTGACTGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 90 bp GTGCTCATTTGGATGTGTCTGGACACAGCACTTACATTGAGGGCATaGATTCAGCTTGAAGTGACTGAAACACGGGCAACTGATGCTCAG +
Preference number: 1 (lower is better)
Translates to: VLIWMCLDTALTLRA*IQLEVTETRATDAQ
Trigger: CTGAGCATCAGTTGCCCGTGTTTCAGTCACTTCAAGCTGAATTCATGCCCTCAATGTAAGTGCTGTGTCCAGACACATCCAAATGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 90 bp CTCAGATCTACGCTGGCTCCCTTATTGGCAGTTCTTGCCCAACTCTaGTTCTTACAGAACTTCAAGCCGTGTTTCTCTTCCTGCTTCTCT +
Preference number: 1 (lower is better)
Translates to: LRSTLAPLLAVLAQL*FLQNFKPCFSSCFS
Trigger: AGAGAAGCAGGAAGAGAAACACGGCTTGAAGTTCTGTAAGAATCAGAGTTGGGCAAGAACTGCCAATAAGGGAGCCAGCGTAGATCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 90 bp TGGGGTTTTATCTGTGCAGGCGGAATTCAGGCAGACTTTGTTTGGTaGACAGTAAGTGCCATTGTGCACATCTCCTTCATCAGGAATGTC +
Preference number: 1 (lower is better)
Translates to: WGFICAGGIQADFVW*TVSAIVHISFIRNV
Trigger: GACATTCCTGATGAAGGAGATGTGCACAATGGCACTTACTGTGCACCAAACAAAGTCTGCCTGAATTCCGCCTGCACAGATAAAACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 90 bp CACTGGGGTTTTATCTGTGCAGGCGGAATTCAGGCAGACTTTGTTTaGTGCACAGTAAGTGCCATTGTGCACATCTCCTTCATCAGGAAT +
Preference number: 1 (lower is better)
Translates to: HWGFICAGGIQADFV*CTVSAIVHISFIRN
Trigger: ATTCCTGATGAAGGAGATGTGCACAATGGCACTTACTGTGCACCAAACAAAGTCTGCCTGAATTCCGCCTGCACAGATAAAACCCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 90 bp GGTACTAGCCCCAGCCTTAAGTTCCACTTCTGTGGAGCCCAAGTTTaGAACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCAT +
Preference number: 1 (lower is better)
Translates to: GTSPSLKFHFCGAQV*NFILASSKATWFFH
Trigger: ATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTTTCAAACTTGGGCTCCACAGAAGTGGAACTTAAGGCTGGGGCTAGTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 90 bp GCACATCTCCTTCATCAGGAATGTCAGTACTCATATAGGCATCCATaGTCCAACATGAGCCATCTCCCTGAGGGACCTGAATCATTGTAT +
Preference number: 1 (lower is better)
Translates to: AHLLHQECQYSYRHP*SNMSHLPEGPESLY
Trigger: ATACAATGATTCAGGTCCCTCAGGGAGATGGCTCATGTTGGAGCATGGATGCCTATATGAGTACTGACATTCCTGATGAAGGAGATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 90 bp CTGTGCAGGCGGAATTCAGGCAGACTTTGTTTGGTGCACAGTAAGTaGCATTGTGCACATCTCCTTCATCAGGAATGTCAGTACTCATAT +
Preference number: 1 (lower is better)
Translates to: LCRRNSGRLCLVHSK*HCAHLLHQECQYSY
Trigger: ATATGAGTACTGACATTCCTGATGAAGGAGATGTGCACAATGGCACTTACTGTGCACCAAACAAAGTCTGCCTGAATTCCGCCTGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 90 bp GTGTTTAGTACTCAGATCTACGCTGGCTCCCTTATTGGCAGTTCTTaGCCAACTCTGATTCTTACAGAACTTCAAGCCGTGTTTCTCTTC +
Preference number: 1 (lower is better)
Translates to: VFSTQIYAGSLIGSS*PTLILTELQAVFLF
Trigger: GAAGAGAAACACGGCTTGAAGTTCTGTAAGAATCAGAGTTGGGCAAGAACTGCCAATAAGGGAGCCAGCGTAGATCTGAGTACTAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 90 bp TTCATCAGGAATGTCAGTACTCATATAGGCATCCATGCTCCAACATaGGCCATCTCCCTGAGGGACCTGAATCATTGTATGTTGGAGATT +
Preference number: 1 (lower is better)
Translates to: FIRNVSTHIGIHAPT*AISLRDLNHCMLEI
Trigger: AATCTCCAACATACAATGATTCAGGTCCCTCAGGGAGATGGCTCATGTTGGAGCATGGATGCCTATATGAGTACTGACATTCCTGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 90 bp AAAGGACAAAGTTCTTTGTGGCCCACTGCCTCTTTCCCTCATTTCTaGAGTTTTCAGGGTACCATTTATCAGTTCAGCTCTCCTTTGTCA +
Preference number: 1 (lower is better)
Translates to: KGQSSLWPTASFPHF*SFQGTIYQFSSPLS
Trigger: TGACAAAGGAGAGCTGAACTGATAAATGGTACCCTGAAAACTGCAGAAATGAGGGAAAGAGGCAGTGGGCCACAAAGAACTTTGTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 90 bp ACGGTGAAATTTACACTTATGACAACATGGACCATCACTGCACTCTaGTTTCGCCTTCAGTATACAGTTTTCATCACAGCATGCATGATG +
Preference number: 1 (lower is better)
Translates to: TVKFTLMTTWTITAL*FRLQYTVFITACMM
Trigger: CATCATGCATGCTGTGATGAAAACTGTATACTGAAGGCGAAAGCAGAGTGCAGTGATGGTCCATGTTGTCATAAGTGTAAATTTCACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 90 bp ATCCCTTACGGTGAAATTTACACTTATGACAACATGGACCATCACTaGACTCTGCTTTCGCCTTCAGTATACAGTTTTCATCACAGCATG +
Preference number: 1 (lower is better)
Translates to: IPYGEIYTYDNMDHH*TLLSPSVYSFHHSM
Trigger: CATGCTGTGATGAAAACTGTATACTGAAGGCGAAAGCAGAGTGCAGTGATGGTCCATGTTGTCATAAGTGTAAATTTCACCGTAAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 90 bp ACAGCAAGGATATCCCTTACGGTGAAATTTACACTTATGACAACATaGACCATCACTGCACTCTGCTTTCGCCTTCAGTATACAGTTTTC +
Preference number: 1 (lower is better)
Translates to: TARISLTVKFTLMTT*TITALCFRLQYTVF
Trigger: GAAAACTGTATACTGAAGGCGAAAGCAGAGTGCAGTGATGGTCCATGTTGTCATAAGTGTAAATTTCACCGTAAGGGATATCCTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 90 bp CGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTaGGGCATAATGCAGATGTACCATTGCAAAATTCTGGGAGATCAC +
Preference number: 1 (lower is better)
Translates to: RKLYDILSHLAYACC*GIMQMYHCKILGDH
Trigger: GTGATCTCCCAGAATTTTGCAATGGTACATCTGCATTATGCCCCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 90 bp TTTGATATACTTGGCTTCATCTCCCTATTTCTAACCTTAGGAATCTaGTTCTTCCTCCTCTTCTTCCTCCTCCTCCTCTTCTTTTTCTTC +
Preference number: 1 (lower is better)
Translates to: FDILGFISLFLTLGI*FFLLFFLLLLFFFF
Trigger: GAAGAAAAAGAAGAGGAGGAGGAGGAAGAAGAGGAGGAAGAATCAGATTCCTAAGGTTAGAAATAGGGAGATGAAGCCAAGTATATCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 90 bp TCCTCAGGCAAATTATTCTTTATCCTCAGCTCAGGCCACACAACTTaGTATCCATTAATCTGCTCATTCTTTGAAACACAACATTCTGTC +
Preference number: 1 (lower is better)
Translates to: SSGKLFFILSSGHTT*YPLICSFFETQHSV
Trigger: GACAGAATGTTGTGTTTCAAAGAATGAGCAGATTAATGGATATCAAGTTGTGTGGCCTGAGCTGAGGATAAAGAATAATTTGCCTGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 90 bp TGTCAGCCTCTTTGGAATAATTATTTCATAGAAAGAGTAATAGATTaGTCCCAGGTGACAGTACATGCTTGGCACAAAAATCACCAAAAG +
Preference number: 1 (lower is better)
Translates to: CQPLWNNYFIERVID*SQVTVHAWHKNHQK
Trigger: CTTTTGGTGATTTTTGTGCCAAGCATGTACTGTCACCTGGGATCAATCTATTACTCTTTCTATGAAATAATTATTCCAAAGAGGCTGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 90 bp AGCAGAAGGTTAATAAATCATGTAGGCAAACAGGAGAGCATAACCTaGTGCTTTATAAGAATTATATTTACAGTGTTATGTTTCCACAGG +
Preference number: 1 (lower is better)
Translates to: SRRLINHVGKQESIT*CFIRIIFTVLCFHR
Trigger: CCTGTGGAAACATAACACTGTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGATTTATTAACCTTCTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp TCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGGTGTCCGGCTGTGGTGTTTaGAGTAAAAAGGAGGGTATC +
Preference number: 2 (lower is better)
Translates to: SRASVELSQGWSSTPSMVSGCGV*SKKEGI
Trigger: GATACCCTCCTTTTTACTCCAAACACCACAGCCGGA...CACCATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553053.5
3UTR-3UTR CCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACGGACAGTCCTTCCACTaGGCTATCTCCTCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHGQSFH*AISSLD
Trigger: GTCCAGGGAGGAGATAGCCCAGTGGAAGGACTGTCC...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp GCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGGTGAGTCTCTCCTCACAACATCTTTaGCCATCTCTGAGATCTGAC +
Preference number: 2 (lower is better)
Translates to: ASVELSQGWSSTPSMVSLSSQHL*PSLRSD
Trigger: GTCAGATCTCAGAGATGGCCAAAGATGTTGTGAGGA...GAGACTCACCATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
3UTR CAA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATaGACGTTACTGCCCCACATCTGGAACCGCTGGTTGTTGACCACG +
Preference number: 2 (lower is better)
Translates to: LLARAMTSTTVWTVS*TLLPHIWNRWLLTT
Trigger: CGTGGTCAACAACCAGCGGTTCCAGATGTGGGGCAGTAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAAGGCAGAGGTTGCAGTaGGCCAAGAGCAAGCCACTG +
Preference number: 2 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLRQRLQ*AKSKPL
Trigger: CAGTGGCTTGCTCTTGGCTCACTGCAACCTCTGCCT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp TTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGCAAAACTGCCTGTCATaGTCTTTCTTCGCATATCCT +
Preference number: 2 (lower is better)
Translates to: LSRASVELSQGWSSTPSMQNCLS*SFFAYP
Trigger: AGGATATGCGAAGAAAGATCATGACAGGCAGTTTTG...CATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553053.5
3UTR-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCAGAATCCCTACGCTTaGGGCCCCTGGGCCGTGGCT +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYQNPYA*GPWAVA
Trigger: AGCCACGGCCCAGGGGCCGCAAGCGTAGGGATTCTG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 90 bp TGGACCGTCTCATTGACGTTACTGCCCCACATCTGGAACCGCTGGTaGTTGACCACGACAAACATCTCCACGTACTTTTTGTGTGACCAC +
Preference number: 2 (lower is better)
Translates to: WTVSLTLLPHIWNRW*LTTTNISTYFLCDH
Trigger: GTGGTCACACAAAAAGTACGTGGAGATGTTTGTCGTGGTCAACAACCAGCGGTTCCAGATGTGGGGCAGTAACGTCAATGAGACGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 90 bp ATTCCAGCCAGCACCACCTCTGTGTTTATTCCCCTAGTGAAGCTGTaGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTG +
Preference number: 2 (lower is better)
Translates to: IPASTTSVFIPLVKL*ARAMTSTTVWTVSL
Trigger: CAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAGCTTCACTAGGGGAATAAACACAGAGGTGGTGCTGGCTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACGAGCTGGAGTCTACCTaGCAGCTTTTCTATGTACCA +
Preference number: 2 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHELEST*QLFYVP
Trigger: TGGTACATAGAAAAGCTGGCAGGTAGACTCCAGCTC...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTTCCTGCTTTTCTCTTaGGAATTAGGGGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHFLLFS*ELGGRR
Trigger: TCTCCTGCCCCCTAATTCCCAAGAGAAAAGCAGGAA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACAGCTTGGTGCTCATTTaGATGTGTCTGGACACAGCA +
Preference number: 2 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHSLVLI*MCLDTA
Trigger: TGCTGTGTCCAGACACATCCAAATGAGCACCAAGCT...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp GAGTCTCTCCTCCGGTTTGACCTTCAGGAGCTTCCTCACAACATCTTTGGCCATTCTTCGCATATCCTTTaGGATAGTCCGGCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: ESLLRFDLQELPHNIFGHSSHIL*DSPAVV
Trigger: CACCACAGCCGGACTATCCCAAAGGATATGCGAAGA...ATGGCCAAAGATGTTGTGAGGAAGCTCCTGAAGGTCAAACCGGAGGAGAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553053.5
3UTR CAA 90 bp ACCGTCTCATTGACGTTACTGCCCCACATCTGGAACCGCTGGTTGTaGACCACGACAAACATCTCCACGTACTTTTTGTGTGACCACAAG +
Preference number: 2 (lower is better)
Translates to: TVSLTLLPHIWNRWL*TTTNISTYFLCDHK
Trigger: CTTGTGGTCACACAAAAAGTACGTGGAGATGTTTGTCGTGGTCAACAACCAGCGGTTCCAGATGTGGGGCAGTAACGTCAATGAGACGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGAGGGGGCAGGAGAAATaGGGGCTCACCTCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWRGQEK*GLTSLF
Trigger: GAAGAGGGAGGTGAGCCCTCATTTCTCCTGCCCCCT...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACCTGGGAGACAGAGGTTaGAGTGAGCCGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: RVINKINAAQRMPTQNPDLGDRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCAACCTCTGTCTCCCAG...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACACATCCACTACTGTCTaGACCGTCTCATTGACGTTA +
Preference number: 2 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHTSTTV*TVSLTL
Trigger: TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGT...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACGGCAGACGTATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: RVINKINAAQRMPTQNPDGRRIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATACGTCTGCC...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAAACCAAATGTCACCCTaGAGATTCAGGGTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLNQMSP*RFRVEE
Trigger: TTCCTCCACCCTGAATCTTCAGGGTGACATTTGGTT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGCGATCTCCACTCACTaGAACCTCTGCCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYAISTH*NLCLPG
Trigger: ACCTGGGAGGCAGAGGTTGCAGTGAGTGGAGATCGC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTTAAAGAGTAATTCCTaGCAGGCACAGTGGTTTGCT +
Preference number: 2 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHLKSNS*QAQWFA
Trigger: AGCAAACCACTGTGCCTGGCAGGAATTACTCTTTAA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTCTTCCAAGGCCACTTaGTTTTTCCATAAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHSSKAT*FFHKAG
Trigger: TCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 90 bp TCACTGGGGTTTTATCTGTGCAGGCGGAATTCAGGCAGACTTTGTTaGGTGCACAGTAAGTGCCATTGTGCACATCTCCTTCATCAGGAA +
Preference number: 2 (lower is better)
Translates to: SLGFYLCRRNSGRLC*VHSKCHCAHLLHQE
Trigger: TTCCTGATGAAGGAGATGTGCACAATGGCACTTACTGTGCACCAAACAAAGTCTGCCTGAATTCCGCCTGCACAGATAAAACCCCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAACACAGCACTTACATTaGGGGCATGAATTCAGCTTG +
Preference number: 2 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLTQHLH*GHEFSL
Trigger: CAAGCTGAATTCATGCCCTCAATGTAAGTGCTGTGT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGAAGACCAAGCCATGCTaGGTCCCTTGGGAGCTACTG +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWKTKPC*VPWELL
Trigger: CAGTAGCTCCCAAGGGACTCAGCATGGCTTGGTCTT...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACGAGACCTTTCAAATATaGGATACGACTACAGAAAGG +
Preference number: 2 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHETFQI*DTTTER
Trigger: CCTTTCTGTAGTCGTATCTCATATTTGAAAGGTCTC...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACTCTGCTCTGCGAGCTaGAGTCTACCTGCCAGCTTT +
Preference number: 2 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKLCSAS*SLPASF
Trigger: AAAGCTGGCAGGTAGACTCCAGCTCGCAGAGCAGAG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACGCTCAAGTTTCACCATaGGAGTATATAAAGGATCAG +
Preference number: 2 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHAQVSP*EYIKDQ
Trigger: CTGATCCTTTATATACTCCCATGGTGAAACTTGAGC...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACAGTACTTTGAGAGGCTaGGGTGGATGGTCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: RVINKINAAQRMPTQNPDSTLRG*GGWSGV
Trigger: AACTCCTGACCATCCACCTCAGCCTCTCAAAGTACT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTGGTAGGAGAATGGTGTaGACCTGGGAGGCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: NFILASSKATWFFHKAGCGRRMV*TWEAEL
Trigger: AAGCTCTGCCTCCCAGGTTCACACCATTCTCCTACC...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAAGCACTTTTGGAGGCTaGGGTGGGCGGATCACGAGG +
Preference number: 2 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITSTFGG*GGRITR
Trigger: CCTCGTGATCCGCCCACCTCAGCCTCCAAAAGTGCT...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCTGGTCTTGAACTCTTaGCCTAAGGTGATCTGCCCG +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYLVLNS*PKVICP
Trigger: CGGGCAGATCACCTTAGGTCAAGAGTTCAAGACCAG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTATGTGGAGCCCAAGTTTaGAACTTTATCTTAGCCTCT +
Preference number: 2 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLCGAQV*NFILAS
Trigger: AGAGGCTAAGATAAAGTTTCAAACTTGGGCTCCACA...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGCTCTTCACCTTCAGATaGACCAGGTGCTTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWLFTFR*TRCFWP
Trigger: AGGCCAGAAGCACCTGGTTCATCTGAAGGTGAAGAG...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGGGAACCGCTGGTTGTTaGCCACGACAAACATCTCCA +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWGTAGC*PRQTSP
Trigger: TGGAGATGTTTGTCGTGGTCAACAACCAGCGGTTCC...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACTTTGAGAGGCTGAGGTaGATGGTCAGGAGTTCGAGA +
Preference number: 2 (lower is better)
Translates to: RVINKINAAQRMPTQNPDFERLR*MVRSSR
Trigger: TCTCGAACTCCTGACCATCCACCTCAGCCTCTCAAA...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACTTACTGCCCCACATCTaGAACCGCTGGTTGTTGACC +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYLLPHI*NRWLLT
Trigger: GGTCAACAACCAGCGGTTCCAGATGTGGGGCAGTAA...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 90 bp CCATCTTGCTTATGCCTGTTGTTGGGGCATAATGCAGATGTACCATaGCAAAATTCTGGGAGATCACAGGAACGACTAGAAGGACAGCAA +
Preference number: 2 (lower is better)
Translates to: PSCLCLLLGHNADVP*QNSGRSQERLEGQQ
Trigger: TTGCTGTCCTTCTAGTCGTTCCTGTGATCTCCCAGAATTTTGCAATGGTACATCTGCATTATGCCCCAACAACAGGCATAAGCAAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACAGGCGGAGGTTGCAGTaGGCGGAGATAGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYRRRLQ*AEIVPL
Trigger: CAGTGGCACTATCTCCGCTCACTGCAACCTCCGCCT...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAGAACTAAAATTGACCTaGAATGTCTGTGGAAGTCCT +
Preference number: 2 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLELKLT*NVCGSP
Trigger: AGGACTTCCACAGACATTTCAGGTCAATTTTAGTTC...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAGAAAGAGTAATAGATTaGTCCCAGGTGACAGTACAT +
Preference number: 2 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLERVID*SQVTVH
Trigger: ATGTACTGTCACCTGGGATCAATCTATTACTCTTTC...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACATATTCTGTCCAGGGTaGTGCCCAACGATCATGTGG +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYIFCPG*CPTIMW
Trigger: CCACATGATCGTTGGGCATCACCCTGGACAGAATAT...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACATGGGCCATCAGGGCTaGAAACAACAGCACATCTTC +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYMGHQG*KQQHIF
Trigger: GAAGATGTGCTGTTGTTTGCAGCCCTGATGGCCCAT...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACCTCTTCTTCCATCATaGAAGTTGGCTCCCCAAGCT +
Preference number: 2 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKPLLPS*KLAPQA
Trigger: AGCTTGGGGAGCCAACTTCCATGATGGAAGAAGAGG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 90 bp CTGAAACACGGGCAACTGATGCTCAGAGTCAAAGGGAGTATCACTTaGGATACCTTTTCCATCGCACCTAAAATTCAGCATACACTGAAG +
Preference number: 2 (lower is better)
Translates to: LKHGQLMLRVKGSIT*DTFSIAPKIQHTLK
Trigger: CTTCAGTGTATGCTGAATTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCATCAGTTGCCCGTGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAAATCTGCTCATTCTTTaGAACACAACATTCTGTCAG +
Preference number: 2 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLNLLIL*NTTFCQ
Trigger: CTGACAGAATGTTGTGTTTCAAAGAATGAGCAGATT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAATTTCCTTCAAACAGCTaGTCTCGGGGCCAAAACCAT +
Preference number: 2 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKFPSNS*SRGQNH
Trigger: ATGGTTTTGGCCCCGAGAGCAGCTGTTTGAAGGAAA...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTATTGCCGGTGAGATTTTaGCATCATGAAAAGTATTCA +
Preference number: 2 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLLPVRF*HHEKYS
Trigger: TGAATACTTTTCATGATGGCAAAATCTCACCGGCAA...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACATTCAAGCAATTCTCCTaGCTCAGCCTCCCGAGCAGC +
Preference number: 2 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITFKQFS*LSLPSS
Trigger: GCTGCTCGGGAGGCTGAGGCAGGAGAATTGCTTGAA...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGGGAAAAGAAGCCCTATaGACCCATTCCTTACGCAGT +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWGKEAL*THSLRS
Trigger: ACTGCGTAAGGAATGGGTGCATAGGGCTTCTTTTCC...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGTTCTTTGTGGCCCACTaGCTCTTTCCCTCATTTCTG +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWFFVAH*LFPSFL
Trigger: CAGAAATGAGGGAAAGAGGCAGTGGGCCACAAAGAA...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGTTCCATCATGGAAGTTaGCTCCCCAAGCTCAAGTGT +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWFHHGS*LPKLKC
Trigger: ACACTTGAGCTTGGGGAGCCAACTTCCATGATGGAA...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACCTGAAGATTCAGGGTaGAGGAATTACTCAGCACAG +
Preference number: 2 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKPEDSG*RNYSAQ
Trigger: CTGTGCTGAGTAATTCCTCCACCCTGAATCTTCAGG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAGCTGAGGTAGGAGAATaGTGTGAACCTGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITAEVGE*CEPGRQ
Trigger: CTGCCTCCCAGGTTCACACCATTCTCCTACCTCAGC...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGTTGCATTACAACAGCTaGGGCATCCTCCAGAGTGTT +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWLHYNS*GILQSV
Trigger: AACACTCTGGAGGATGCCCCAGCTGTTGTAATGCAA...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAAAAATTAGCGGGGCGTaGTGGCAGGCGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITKISGA*WQAPVI
Trigger: GATTACAGGCGCCTGCCACCACGCCCCGCTAATTTT...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGCAAGCAGTCTGCAATaGCAGCCACAAAAATGTCTT +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYASSLQ*QPQKCL
Trigger: AAGACATTTTTGTGGCTGTCATTGCAGACTGCTTGC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTGAATTCAGCTTGAAGTaGCTGAAACACGGGCAACTG +
Preference number: 2 (lower is better)
Translates to: NFILASSKATWFFHKAGCEFSLK*LKHGQL
Trigger: CAGTTGCCCGTGTTTCAGTCACTTCAAGCTGAATTC...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGACCTGCACAGATGTTaGCAGAAACAAAAGAACCTG +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYDLHRC*QKQKNL
Trigger: CAGGTTCTTTTGTTTCTGTCAACATCTGTGCAGGTC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACTTCCAGCAAGCAGTCTaGAATGACAGCCACAAAAAT +
Preference number: 2 (lower is better)
Translates to: RVINKINAAQRMPTQNPDFQQAV*NDSHKN
Trigger: ATTTTTGTGGCTGTCATTGCAGACTGCTTGCTGGAA...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGTTCAAGGTATGCTGTTaGATTACAACAGCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWFKVCC*ITTAGA
Trigger: TGCCCCAGCTGTTGTAATGCAACAGCATACCTTGAA...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGACCATCACTGCACTCTaGTTTCGCCTTCAGTATACA +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWTITAL*FRLQYT
Trigger: TGTATACTGAAGGCGAAAGCAGAGTGCAGTGATGGT...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGCAGACTTTGTTTGGTaGACAGTAAGTGCCATTGTG +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYADFVW*TVSAIV
Trigger: CACAATGGCACTTACTGTGCACCAAACAAAGTCTGC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCACAAACTTCCAGCTTaGTGCTCATTTGGATGTGTC +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYHKLPA*CSFGCV
Trigger: GACACATCCAAATGAGCACCAAGCTGGAAGTTTGTG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTACATAAAGCAGGATGTTaGCAGAGTCTTTTAATAATG +
Preference number: 2 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLHKAGC*QSLLIM
Trigger: CATTATTAAAAGACTCTGCCAACATCCTGCTTTATG...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCAGGCAGACTTTGTTTaGTGCACAGTAAGTGCCATT +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYQADFV*CTVSAI
Trigger: AATGGCACTTACTGTGCACCAAACAAAGTCTGCCTG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACGGCAGGAGAATCACTTaGACCTGGGAGACAGAGGTT +
Preference number: 2 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYGRRIT*TWETEV
Trigger: AACCTCTGTCTCCCAGGTTCAAGTGATTCTCCTGCC...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAATTCTTCTGTTGCCGGTaGGATTTTGCCATCATGAAA +
Preference number: 2 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKFFCCR*DFAIMK
Trigger: TTTCATGATGGCAAAATCTCACCGGCAACAGAAGAA...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACTTCCTGAGTGTGATTTaGAAGTCCACTGTGACATCT +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYFLSVI*KSTVTS
Trigger: AGATGTCACAGTGGACTTGCAAATCACACTCAGGAA...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGAAGGGAGTATCACTTTaGATACCTTTTCCATCGCAC +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWKGVSL*IPFPSH
Trigger: GTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTT...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGTCTTGAAGAGTCCATaGGCTCAATGCTGTAAGATT +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYVLKSP*AQCCKI
Trigger: AATCTTACAGCATTGAGCCCATGGACTCTTCAAGAC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACAGAATCCAGAGTCCTTaGTTCAACTGTTTACTAATC +
Preference number: 2 (lower is better)
Translates to: RVINKINAAQRMPTQNPDRIQSP*FNCLLI
Trigger: GATTAGTAAACAGTTGAATCAAGGACTCTGGATTCT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAAACACACAGGGCAATTaGAACCAGAATCCAGAGTCC +
Preference number: 2 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITNTQGN*NQNPES
Trigger: GGACTCTGGATTCTGGTTTCAATTGCCCTGTGTGTT...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGGTCAAAATAAAAGCTaGCTAACCAGGTGTCTAGTT +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYGQNKS*LTRCLV
Trigger: AACTAGACACCTGGTTAGTCAGCTTTTATTTTGACC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGATGCAGATGTACCATTaGAAAATTCTGGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWMQMYH*KILGDH
Trigger: GTGATCTCCCAGAATTTTGCAATGGTACATCTGCAT...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACGTAGTCCCAGCTACTTaGAAGTCTGAGGCACGAGAA +
Preference number: 2 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYVVPAT*KSEARE
Trigger: TTCTCGTGCCTCAGACTTCCAAGTAGCTGGGACTAC...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 90 bp AGGGTGGAGGAATTACTCAGCACAGTGGAGGAGTTAGAAAATAAGTaGCTGGTGAGATCAATTTTGATCGAAGAGAATGAGATGAGAAAA +
Preference number: 2 (lower is better)
Translates to: RVEELLSTVEELENK*LVRSILIEENEMRK
Trigger: TTTTCTCATCTCATTCTCTTCGATCAAAATTGATCTCACCAGCAACTTATTTTCTAACTCCTCCACTGTGCTGAGTAATTCCTCCACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTGGAATACTGAACCTCTaGCCTAAGATAGGAAAACTA +
Preference number: 2 (lower is better)
Translates to: NFILASSKATWFFHKAGCGILNL*PKIGKL
Trigger: TAGTTTTCCTATCTTAGGGCAGAGGTTCAGTATTCC...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACAGCAGAATTTACTGCTaGACTAGGAATACACAAACA +
Preference number: 2 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYSRIYC*TRNTQT
Trigger: TGTTTGTGTATTCCTAGTCCAGCAGTAAATTCTGCT...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGACTATTATTAAGTCCTaGACCCTAAATCTATACAGC +
Preference number: 2 (lower is better)
Translates to: GTRKLYDILSHLAYACCWTIIKS*TLNLYS
Trigger: GCTGTATAGATTTAGGGTGCAGGACTTAATAATAGT...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACGTACCCACCAAAAACTaGTTCACACACACACACACA +
Preference number: 2 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYVPTKN*FTHTHT
Trigger: TGTGTGTGTGTGTGTGAAGCAGTTTTTGGTGGGTAC...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACACGGTCCTTTTTCTACTaGTGGCAAGTGATTTTTGTA +
Preference number: 2 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITRSFFY*WQVIFV
Trigger: TACAAAAATCACTTGCCAGCAGTAGAAAAAGGACCG...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 90 bp CTTCGGTTTGGAACTAAAATTGACCTGAAATGTCTGTGGAAGTCCTaGAATTTGGTTTTGATGTCAATTTCCTTGGTGTATTTAGCAGTA +
Preference number: 2 (lower is better)
Translates to: LRFGTKIDLKCLWKS*NLVLMSISLVYLAV
Trigger: TACTGCTAAATACACCAAGGAAATTGACATCAAAACCAAATTCAAGGACTTCCACAGACATTTCAGGTCAATTTTAGTTCCAAACCGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR TCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACAAATTGAATAACAGATaGCTATCCTCTCCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYKLNNR*LSSPSA
Trigger: AGCAGAGGGAGAGGATAGTCATCTGTTATTCAATTT...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR GCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACACAGGAGAGCATAACCTaGTGCTTTATAAGAATTATA +
Preference number: 2 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITQESIT*CFIRII
Trigger: TATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTG...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 72 bp TTCTGCTGCTTCTGGCTTTATTTCTGGGGCCGGTGGTaGAGCCACTGCTGGAGGAGCTTCTGCCGGGGCAGC +
Preference number: 3 (lower is better)
Translates to: FCCFWLYFWGRW*SHCWRSFCRGS
Trigger: GCTGCCCCGGCAGAAGCTCCTCCAGCAGTGGCTCCACCACCGGCCCCAGAAATAAAGCCAGAAGCAGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 72 bp CACTTCTGCTGCTTCTGGCTTTATTTCTGGGGCCGGTaGTGGAGCCACTGCTGGAGGAGCTTCTGCCGGGGC +
Preference number: 3 (lower is better)
Translates to: HFCCFWLYFWGR*WSHCWRSFCRG
Trigger: GCCCCGGCAGAAGCTCCTCCAGCAGTGGCTCCACCACCGGCCCCAGAAATAAAGCCAGAAGCAGCAGAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 72 bp ACATTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTaGTCCAGCACTCCCTCGATGGTGAGTCTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: TLSRASVELSQG*SSTPSMVSLSS
Trigger: GGAGGAGAGACTCACCATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
3UTR-3UTR CAA 90 bp TTCCGCGTGAGCCTGCTGGATTCCTGCAACCACTGCCTTGTCCATCATCAGCTGAGTCTCTCCTCCGGTTaGACCTTCAGGAGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: FRVSLLDSCNHCLVHHQLSLSSG*TFRSFL
Trigger: GAGGAAGCTCCTGAAGGTCAAACCGGAGGAGAGACT...CAGCTGATGATGGACAAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACGCGGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553053.5
3UTR-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACCTTCCTGCTCCCTTGTaGCCAGCTAGTAGACACCAC +
Preference number: 3 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHLPAPL*PASRHH
Trigger: GTGGTGTCTACTAGCTGGCAACAAGGGAGCAGGAAG...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 72 bp GTCTGGACCGTCTCATTGACGTTACTGCCCCACATCTaGAACCGCTGGTTGTTGACCACGACAAACATCTCC +
Preference number: 3 (lower is better)
Translates to: VWTVSLTLLPHI*NRWLLTTTNIS
Trigger: GGAGATGTTTGTCGTGGTCAACAACCAGCGGTTCCAGATGTGGGGCAGTAACGTCAATGAGACGGTCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 72 bp ATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTaGGCAGGCACCACTGAGAAAGGCCTGGCCCATATT +
Preference number: 3 (lower is better)
Translates to: MMEGFNSCRKTA*AGTTEKGLAHI
Trigger: AATATGGGCCAGGCCTTTCTCAGTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 72 bp AAGCTGTTGGCCAGAGCAATGACATCCACTACTGTCTaGACCGTCTCATTGACGTTACTGCCCCACATCTGG +
Preference number: 3 (lower is better)
Translates to: KLLARAMTSTTV*TVSLTLLPHIW
Trigger: CCAGATGTGGGGCAGTAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACGGGCAACATCGTGTTTaGCACGATGGAAGAGCATCT +
Preference number: 3 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHGQHRV*HDGRAS
Trigger: AGATGCTCTTCCATCGTGCAAAACACGATGTTGCCC...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTGAGCGAGACTCTGTCTaGGTGGCAGCAGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: NFILASSKATWFFHKAGCERDSV*VAAGWG
Trigger: CCCCCACCCTGCTGCCACCAAGACAGAGTCTCGCTC...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTTTCAAGGTATGCTGTaGCATTACAACAGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHFQGML*HYNSWG
Trigger: GCCCCAGCTGTTGTAATGCAACAGCATACCTTGAAA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACGAGCTTGAGTCTAACTaGGGCAACATAGCAGGATCA +
Preference number: 3 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHELESN*GNIAGS
Trigger: TGATCCTGCTATGTTGCCCAAGTTAGACTCAAGCTC...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACCATGTTCAAACCGTCTaGAAGAGTCCATGGGCTCAA +
Preference number: 3 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHHVQTV*KSPWAQ
Trigger: TTGAGCCCATGGACTCTTCAAGACGGTTTGAACATG...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 72 bp TGGGCCATCAGGGCTGCAAACAACAGCACATCTTCATaGTGGAAGGATTCAACAGCTGCCGCAAAACCGCTT +
Preference number: 3 (lower is better)
Translates to: WAIRAANNSTSS*WKDSTAAAKPL
Trigger: AAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAGATGTGCTGTTGTTTGCAGCCCTGATGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTCACAAACTTCCAGCTaGGTGCTCATTTGGATGTGT +
Preference number: 3 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHSQTSS*VLIWMC
Trigger: ACACATCCAAATGAGCACCAAGCTGGAAGTTTGTGA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACCCTTATTGGCAGTTCTaGCCCAACTCTGATTCTTAC +
Preference number: 3 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHPYWQF*PNSDSY
Trigger: GTAAGAATCAGAGTTGGGCAAGAACTGCCAATAAGG...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 72 bp CTTCTATGTAGCCTTCATAGTGGCAGTCATGTGAGATaGAAGGCGATTCTTGCCCCAGGAGGCCATTGTGGT +
Preference number: 3 (lower is better)
Translates to: LLCSLHSGSHVR*KAILAPGGHCG
Trigger: ACCACAATGGCCTCCTGGGGCAAGAATCGCCTTTCATCTCACATGACTGCCACTATGAAGGCTACATAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 72 bp CACTCCTTCTATGTAGCCTTCATAGTGGCAGTCATGTaGGATGAAAGGCGATTCTTGCCCCAGGAGGCCATT +
Preference number: 3 (lower is better)
Translates to: HSFYVAFIVAVM*DERRFLPQEAI
Trigger: AATGGCCTCCTGGGGCAAGAATCGCCTTTCATCTCACATGACTGCCACTATGAAGGCTACATAGAAGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 72 bp GTCTCATTGACGTTACTGCCCCACATCTGGAACCGCTaGTTGTTGACCACGACAAACATCTCCACGTACTTT +
Preference number: 3 (lower is better)
Translates to: VSLTLLPHIWNR*LLTTTNISTYF
Trigger: AAAGTACGTGGAGATGTTTGTCGTGGTCAACAACCAGCGGTTCCAGATGTGGGGCAGTAACGTCAATGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACAAAGGGAGTATCACTTaGGATACCTTTTCCATCGCA +
Preference number: 3 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHKGSIT*DTFSIA
Trigger: TGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTT...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGCCGAGATCACACCATaGCACTCCAACCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYAEITP*HSNLGN
Trigger: GTTGCCCAGGTTGGAGTGCAATGGTGTGATCTCGGC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 72 bp ACGCTGGCTCCCTTATTGGCAGTTCTTGCCCAACTCTaGTTCTTACAGAACTTCAAGCCGTGTTTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: TLAPLLAVLAQL*FLQNFKPCFSS
Trigger: GGAAGAGAAACACGGCTTGAAGTTCTGTAAGAATCAGAGTTGGGCAAGAACTGCCAATAAGGGAGCCAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 72 bp CCCAGCCTTAAGTTCCACTTCTGTGGAGCCCAAGTTTaGAACTTTATCTTAGCCTCTTCCAAGGCCACTTGG +
Preference number: 3 (lower is better)
Translates to: PSLKFHFCGAQV*NFILASSKATW
Trigger: CCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTTTCAAACTTGGGCTCCACAGAAGTGGAACTTAAGGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 72 bp GTGATGCCCAACGATCATGTGGGCAACATCGTGTTTTaGACGATGGAAGAGCATCTCTTGTCTCCAGTGATT +
Preference number: 3 (lower is better)
Translates to: VMPNDHVGNIVF*TMEEHLLSPVI
Trigger: AATCACTGGAGACAAGAGATGCTCTTCCATCGTGCAAAACACGATGTTGCCCACATGATCGTTGGGCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 72 bp CTTCATCAGGAATGTCAGTACTCATATAGGCATCCATaGTCCAACATGAGCCATCTCCCTGAGGGACCTGAA +
Preference number: 3 (lower is better)
Translates to: LHQECQYSYRHP*SNMSHLPEGPE
Trigger: TTCAGGTCCCTCAGGGAGATGGCTCATGTTGGAGCATGGATGCCTATATGAGTACTGACATTCCTGATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 72 bp CCAGAGTGTTCACAAACTTCCAGCTTGGTGCTCATTTaGATGTGTCTGGACACAGCACTTACATTGAGGGCA +
Preference number: 3 (lower is better)
Translates to: PECSQTSSLVLI*MCLDTALTLRA
Trigger: TGCCCTCAATGTAAGTGCTGTGTCCAGACACATCCAAATGAGCACCAAGCTGGAAGTTTGTGAACACTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCCCCTAGTGAAGCTGTaGGCCAGAGCAATGACATCC +
Preference number: 3 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYPLVKL*ARAMTS
Trigger: GGATGTCATTGCTCTGGCCAACAGCTTCACTAGGGG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTACACGAAAATTGGTTaGTTATGGAAACCCATACTC +
Preference number: 3 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHYTKIG*LWKPIL
Trigger: GAGTATGGGTTTCCATAACAAACCAATTTTCGTGTA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCGGCATTTCACCATGTaGGCCAAGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYRHFTM*AKLVLN
Trigger: GTTCAAGACCAGCTTGGCCAACATGGTGAAATGCCG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACAATAGGCAGGCCCCTTaGTGTTCTCGAAGGAACTGG +
Preference number: 3 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYNRQAP*CSRRNW
Trigger: CCAGTTCCTTCGAGAACACAAAGGGGCCTGCCTATT...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 72 bp CACACACATACAGGGCATACTAACCAAATGTCACCCTaGAGATTCAGGGTGGAGGAATTACTCAGCACAGTG +
Preference number: 3 (lower is better)
Translates to: HTHTGHTNQMSP*RFRVEELLSTV
Trigger: CACTGTGCTGAGTAATTCCTCCACCCTGAATCTTCAGGGTGACATTTGGTTAGTATGCCCTGTATGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 72 bp TGGATGTGTCTGGACACAGCACTTACATTGAGGGCATaGATTCAGCTTGAAGTGACTGAAACACGGGCAACT +
Preference number: 3 (lower is better)
Translates to: WMCLDTALTLRA*IQLEVTETRAT
Trigger: AGTTGCCCGTGTTTCAGTCACTTCAAGCTGAATTCATGCCCTCAATGTAAGTGCTGTGTCCAGACACATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 72 bp GGATCTCTGAAAAGGACAAAGTTCTTTGTGGCCCACTaGCTCTTTCCCTCATTTCTGCAGTTTTCAGGGTAC +
Preference number: 3 (lower is better)
Translates to: GSLKRTKFFVAH*LFPSFLQFSGY
Trigger: GTACCCTGAAAACTGCAGAAATGAGGGAAAGAGGCAGTGGGCCACAAAGAACTTTGTCCTTTTCAGAGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 72 bp CGGAATTCAGGCAGACTTTGTTTGGTGCACAGTAAGTaGCATTGTGCACATCTCCTTCATCAGGAATGTCAG +
Preference number: 3 (lower is better)
Translates to: RNSGRLCLVHSK*HCAHLLHQECQ
Trigger: CTGACATTCCTGATGAAGGAGATGTGCACAATGGCACTTACTGTGCACCAAACAAAGTCTGCCTGAATTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 72 bp TTTATCTGTGCAGGCGGAATTCAGGCAGACTTTGTTTaGTGCACAGTAAGTGCCATTGTGCACATCTCCTTC +
Preference number: 3 (lower is better)
Translates to: FICAGGIQADFV*CTVSAIVHISF
Trigger: GAAGGAGATGTGCACAATGGCACTTACTGTGCACCAAACAAAGTCTGCCTGAATTCCGCCTGCACAGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTCTTCCATCATGGAAGTaGGCTCCCCAAGCTCAAGTG +
Preference number: 3 (lower is better)
Translates to: NFILASSKATWFFHKAGCLPSWK*APQAQV
Trigger: CACTTGAGCTTGGGGAGCCAACTTCCATGATGGAAG...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTCAGCTTGGTGCTCATTaGGATGTGTCTGGACACAGC +
Preference number: 3 (lower is better)
Translates to: NFILASSKATWFFHKAGCQLGAH*DVSGHS
Trigger: GCTGTGTCCAGACACATCCAAATGAGCACCAAGCTG...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAAGAAAGAGTAATAGATaGATCCCAGGTGACAGTACA +
Preference number: 3 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLRKSNR*IPGDST
Trigger: TGTACTGTCACCTGGGATCAATCTATTACTCTTTCT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 72 bp AATGTCAGTACTCATATAGGCATCCATGCTCCAACATaGGCCATCTCCCTGAGGGACCTGAATCATTGTATG +
Preference number: 3 (lower is better)
Translates to: NVSTHIGIHAPT*AISLRDLNHCM
Trigger: CATACAATGATTCAGGTCCCTCAGGGAGATGGCTCATGTTGGAGCATGGATGCCTATATGAGTACTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 72 bp CTTGGCTTCATCTCCCTATTTCTAACCTTAGGAATCTaGTTCTTCCTCCTCTTCTTCCTCCTCCTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: LGFISLFLTLGI*FFLLFFLLLLF
Trigger: GAAGAGGAGGAGGAGGAAGAAGAGGAGGAAGAATCAGATTCCTAAGGTTAGAAATAGGGAGATGAAGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 72 bp AGTAGACACCACAGGAGACTCACGCTTGATGTGCCATaGTGTATAACACATGTTCAAACCGTCTTGAAGAGT +
Preference number: 3 (lower is better)
Translates to: SRHHRRLTLDVP*CITHVQTVLKS
Trigger: ACTCTTCAAGACGGTTTGAACATGTGTTATACACCATGGCACATCAAGCGTGAGTCTCCTGTGGTGTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 72 bp TCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTTaGCAGAGTCTTTTAATAATGCCACCAGTGACATGG +
Preference number: 3 (lower is better)
Translates to: SKATWFFHKAGC*QSLLIMPPVTW
Trigger: CCATGTCACTGGTGGCATTATTAAAAGACTCTGCCAACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAGTTCCTGCTTTTCTCTaGGGAATTAGGGGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITVPAFL*GIRGQE
Trigger: CTCCTGCCCCCTAATTCCCAAGAGAAAAGCAGGAAC...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGGGTGACAGTACATGCTaGGCACAAAAATCACCAAAA +
Preference number: 3 (lower is better)
Translates to: GTRKLYDILSHLAYACCWGDSTC*AQKSPK
Trigger: TTTTGGTGATTTTTGTGCCAAGCATGTACTGTCACC...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 72 bp TTTACACTTATGACAACATGGACCATCACTGCACTCTaGTTTCGCCTTCAGTATACAGTTTTCATCACAGCA +
Preference number: 3 (lower is better)
Translates to: FTLMTTWTITAL*FRLQYTVFITA
Trigger: TGCTGTGATGAAAACTGTATACTGAAGGCGAAAGCAGAGTGCAGTGATGGTCCATGTTGTCATAAGTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 72 bp ATATCCCTTACGGTGAAATTTACACTTATGACAACATaGACCATCACTGCACTCTGCTTTCGCCTTCAGTAT +
Preference number: 3 (lower is better)
Translates to: ISLTVKFTLMTT*TITALCFRLQY
Trigger: ATACTGAAGGCGAAAGCAGAGTGCAGTGATGGTCCATGTTGTCATAAGTGTAAATTTCACCGTAAGGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGATGGAAGAGCATCTCTaGTCTCCAGTGATTGAAATT +
Preference number: 3 (lower is better)
Translates to: GTRKLYDILSHLAYACCWMEEHL*SPVIEI
Trigger: AATTTCAATCACTGGAGACAAGAGATGCTCTTCCAT...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCAGAATCCAGAGTCCTaGATTCAACTGTTTACTAAT +
Preference number: 3 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYQNPES*IQLFTN
Trigger: ATTAGTAAACAGTTGAATCAAGGACTCTGGATTCTG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACTGGAAGTCCTTGAATTaGGTTTTGATGTCAATTTCC +
Preference number: 3 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYWKSLN*VLMSIS
Trigger: GGAAATTGACATCAAAACCAAATTCAAGGACTTCCA...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACAAATTGTATGACATTTaGAGCCATCTTGCTTATGCC +
Preference number: 3 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYKLYDI*SHLAYA
Trigger: GGCATAAGCAAGATGGCTCAAAATGTCATACAATTT...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR GCA 72 bp GGTGAAATTTACACTTATGACAACATGGACCATCACTaGACTCTGCTTTCGCCTTCAGTATACAGTTTTCAT +
Preference number: 3 (lower is better)
Translates to: GEIYTYDNMDHH*TLLSPSVYSFH
Trigger: ATGAAAACTGTATACTGAAGGCGAAAGCAGAGTGCAGTGATGGTCCATGTTGTCATAAGTGTAAATTTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CCA 72 bp TATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTaGGGCATAATGCAGATGTACCATTGCAAAATTCTG +
Preference number: 3 (lower is better)
Translates to: YDILSHLAYACC*GIMQMYHCKIL
Trigger: CAGAATTTTGCAATGGTACATCTGCATTATGCCCCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 72 bp AAAGTGAAAGAATCCTTCCTTCTACATCAGTATATCTaGGTCAGAGCCACTAAAGCTATCTATTTCTACTTC +
Preference number: 3 (lower is better)
Translates to: KVKESFLLHQYI*VRATKAIYFYF
Trigger: GAAGTAGAAATAGATAGCTTTAGTGGCTCTGACTCAGATATACTGATGTAGAAGGAAGGATTCTTTCACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR TCA 72 bp AAATTATTCTTTATCCTCAGCTCAGGCCACACAACTTaGTATCCATTAATCTGCTCATTCTTTGAAACACAA +
Preference number: 3 (lower is better)
Translates to: KLFFILSSGHTT*YPLICSFFETQ
Trigger: TTGTGTTTCAAAGAATGAGCAGATTAATGGATATCAAGTTGTGTGGCCTGAGCTGAGGATAAAGAATAATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CAGCTGAGCAGAAGGCAGCACATTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGGAGGCGGCGGCCCCTaGGGACAGGTCTTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QLSRRQHIIQGLGGIEPGGGGGP*GQVFVL
Trigger: CAGCACAAAGACCTGTCCCCAGGGGCCGCCGCCTCC...CCCTGGCTCAATTCCACCGAGGCCCTGGATAATGTGCTGCCTTCTGCTCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CCA 90 bp TTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGCTCCGACATACTCAGTaGGGCCCCCACAGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LSRASVELSQGWSSTPSMLRHTQ*GPHSRE
Trigger: CTCCCGGCTGTGGGGGCCCCACTGAGTATGTCGGAG...CATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553053.5
3UTR CAA 72 bp GCAGAAGGCAGCACATTATCCAGGGCCTCGGTGGAATaGAGCCAGGGGTGGTCCAGCACTCCCTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: AEGSTLSRASVE*SQGWSSTPSMV
Trigger: CACCATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAATGTGCTGCCTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CCA 90 bp TTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGGAATTGAGCCAGGGGTaGTCCAGCACTCCCTCGATG +
Preference number: 4 (lower is better)
Translates to: LSRASVELSQGWSSTPSMELSQG*SSTPSM
Trigger: CATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTC...CATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553053.5
3UTR CAA 72 bp GCAGAATCCCTACGCTTGCGGCCCCTGGGCCGTGGCTaGTTAAATAGGCAGGCCCCTTTGTGTTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: AESLRLRPLGRG*LNRQAPLCSRR
Trigger: CCTTCGAGAACACAAAGGGGCCTGCCTATTTAACAAGCCACGGCCCAGGGGCCGCAAGCGTAGGGATTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGAGTGTAGGGCGTCGGTaGGGTAGGTATGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: LSRASVELSQGWSSTPSMSVGRR*GRYDAR
Trigger: TCTGGCATCATACCTACCTCACCGACGCCCTACACT...CATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR GCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACCGGTGGTGGAGCCACTaGTGGAGGAGCTTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHRWWSH*WRSFCR
Trigger: CCGGCAGAAGCTCCTCCAGCAGTGGCTCCACCACCG...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGGTGAGTCTCTCCTCCGGTTTGCCAGATTTCTCCTTCTaGTGCCTTCTTTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSQGWSSTPSMVSLSSGLPDFSF*CLLCAS
Trigger: GGAGGCGCAAAGAAGGCATCAGAAGGAGAAATCTGG...CAAACCGGAGGAGAGACTCACCATCGAGGGAGTGCTGGACCACCCCTGGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR TCA 90 bp CTAGGGACCACAAGTCACAGCTCTACAGTACAGCACAGGCCACTTCATAAAGGCGGGCCTCGGTGGAATTaGGCCAGGGGTGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGTTSHSSTVQHRPLHKGGPRWN*ARGGPA
Trigger: TGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCC...GCCTTTATGAAGTGGCCTGTGCTGTACTGTAGAGCTGTGACTTGTGGTCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR TCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACGCCGAGTGGTCGTGCTaGATACCCAGGTTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHAEWSC*IPRLCP
Trigger: CGGGCACAACCTGGGTATTCAGCACGACCACTCGGC...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAGGGCCTCGGTGGAATTaGGCCAGGGGTGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLGPRWN*ARGGPA
Trigger: TGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCC...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACGCCAACTGTTCCGCGTaGGCCTGCTGGATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHANCSA*ACWIPA
Trigger: TGCAGGAATCCAGCAGGCTCACGCGGAACAGTTGGC...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TTCCGCGTGAGCCTGCTGGATTCCTGCAACCACTGCCTTGTCCATCATCAGCTGTCACTGGGGCATCCTTaGTGGCTTTGTCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: FRVSLLDSCNHCLVHHQLSLGHP*WLCPCR
Trigger: GCGACATGGACAAAGCCATCAAGGATGCCCCAGTGA...CAGCTGATGATGGACAAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR TCA 90 bp GGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGGTGAGTCTCTCCTCAGGCCCAAAGCAGTTTaGCACAGATCATGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GGIEPGVVQHSLDGESLLRPKAV*HRSWRG
Trigger: TCCTCTCCATGATCTGTGTCAAACTGCTTTGGGCCT...GAGGAGAGACTCACCATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR GCA 90 bp GGGTGGTCCAGCACTCCCTCGATGGTGAGTCTCTCCTCCGGTTTGACCTTCAGGGATTCCTGCAACCACTaGCTTGTCCATCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: GWSSTPSMVSLSSGLTFRDSCNH*LVHHQL
Trigger: CAGCTGATGATGGACAAGGCAGTGGTTGCAGGAATC...CCTGAAGGTCAAACCGGAGGAGAGACTCACCATCGAGGGAGTGCTGGACCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CCA 90 bp TTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGTCTTCGCATATCCTTTaGGATAGTCCGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LSRASVELSQGWSSTPSMSSHIL*DSPAVV
Trigger: CACCACAGCCGGACTATCCCAAAGGATATGCGAAGA...CATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTATTCTGGGGCCGGTGGTaGAGCCACTGCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLFWGRW*SHCWRS
Trigger: GCTCCTCCAGCAGTGGCTCCACCACCGGCCCCAGAA...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGGTGAGTCTCCTACATAATAAGGGGTaGACTGGGGTGTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: ASVELSQGWSSTPSMVSLLHNKG*TGVSSS
Trigger: ACTTGATGACACCCCAGTTCACCCCTTATTATGTAG...GAGACTCACCATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR GCA 90 bp GTTCCGCGTGAGCCTGCTGGATTCCTGCAACCACTGCCTTGTCCATCATCAGCTAGCCTGCTGGATTCCTaGAACCACTGCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: VPREPAGFLQPLPCPSSASLLDS*NHCLVH
Trigger: ATGGACAAGGCAGTGGTTGCAGGAATCCAGCAGGCT...AGCTGATGATGGACAAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACGCGGAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAAGGGGAGGCAGGCTCCTaGGGTAGGGCGAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKGEAGS*GRARRG
Trigger: TCCCCGCCTCGCCCTACCCCAGGAGCCTGCCTCCCC...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AGCACATTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCCGGCTGTGGTGTTTaGAGTAAAAAGGAGGGTATC +
Preference number: 4 (lower is better)
Translates to: STLSRASVELSQGWSSTPSGCGV*SKKEGI
Trigger: GATACCCTCCTTTTTACTCCAAACACCACAGCCGGA...GGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAATGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR GCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTCACCCAGGCTGGAGTaGAATGGTGCGATCTCCACT +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHSPRLE*NGAIST
Trigger: AGTGGAGATCGCACCATTGCACTCCAGCCTGGGTGA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACGACAGGTCTTTGTGCTaGGCCCCACGCGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDDRSLC*APRGRL
Trigger: GAGGCGGCCGCGTGGGGCCCAGCACAAAGACCTGTC...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CAGCTGAGCAGAAGGCAGCACATTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTCACACAACTTCACTaGGGCATCCTTGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: QLSRRQHIIQGLGGIEPGVTQLH*GILDGF
Trigger: AAAGCCATCAAGGATGCCCCAGTGAAGTTGTGTGAC...CCCTGGCTCAATTCCACCGAGGCCCTGGATAATGTGCTGCCTTCTGCTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR TCA 90 bp GGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGGTGAGTCTCTCCTCCAAAACTGCCTGTCATaGTCTTTCTTCGCATATCCT +
Preference number: 4 (lower is better)
Translates to: GGIEPGVVQHSLDGESLLQNCLS*SFFAYP
Trigger: AGGATATGCGAAGAAAGATCATGACAGGCAGTTTTG...GAGGAGAGACTCACCATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR TCA 90 bp CCACAAGTCACAGCTCTACAGTACAGCACAGGCCACTTCATAAAGGCCCAAAGCGTCTCTCCTCCGGTTTaGCCTTCAGGAGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PQVTALQYSTGHFIKAQSVSPPV*PSGASS
Trigger: TGAGGAAGCTCCTGAAGGTCAAACCGGAGGAGAGAC...GCTTTGGGCCTTTATGAAGTGGCCTGTGCTGTACTGTAGAGCTGTGACTTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR TCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACAATGGGGTTGTTCACTaGGTGCAGGGGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHNGVVH*VQGFEA
Trigger: AGCCTCAAACCCCTGCACTCAGTGAACAACCCCATT...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTCTGGACCGTCTCATTaGCGTTACTGCCCCACATCT +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHSGPSH*RYCPTS
Trigger: AGATGTGGGGCAGTAACGTCAATGAGACGGTCCAGA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACCAGAATCCCTACGCTTaGGGCCCCTGGGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDQNPYA*GPWAVA
Trigger: AGCCACGGCCCAGGGGCCGCAAGCGTAGGGATTCTG...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACACTACCTCCACTTCCTaGAGTAACACAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHTTSTS*SNTVRG
Trigger: CCCCCTGACTGTGTTACTGCAGGAAGTGGAGGTAGT...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp TTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGCACCTTGGTCAATCTTaGCAAATCCAAAGTCACACA +
Preference number: 4 (lower is better)
Translates to: LSRASVELSQGWSSTPSMHLGQS*QIQSHT
Trigger: TGTGTGACTTTGGATTTGCCAAGATTGACCAAGGTG...CATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CCA 90 bp ACATTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGGTCATCAAGTCACCTTaGTCAATCTTGGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: TLSRASVELSQGWSSTPSVIKSP*SILANP
Trigger: TGGATTTGCCAAGATTGACCAAGGTGACTTGATGAC...CGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
3UTR CAA 72 bp AGAGCAATGACATCCACTACTGTCTGGACCGTCTCATaGACGTTACTGCCCCACATCTGGAACCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: RAMTSTTVWTVS*TLLPHIWNRWL
Trigger: CAACCAGCGGTTCCAGATGTGGGGCAGTAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACAGTACTTTGAGAGGCTaGGGTGGATGGTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHSTLRG*GGWSGV
Trigger: AACTCCTGACCATCCACCTCAGCCTCTCAAAGTACT...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACATATTCTGTCCAGGGTaGTGCCCAACGATCATGTGG +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHIFCPG*CPTIMW
Trigger: CCACATGATCGTTGGGCATCACCCTGGACAGAATAT...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACGTTACTTGGCTGGCTTaGTTCTCTGTAAAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHVTWLA*FSVKCR
Trigger: CCGGCACTTTACAGAGAAGCAAGCCAGCCAAGTAAC...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTTCCTGCTCCCTTGTTaGCAGCTAGTAGACACCACA +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHFLLPC*QLVDTT
Trigger: TGTGGTGTCTACTAGCTGGCAACAAGGGAGCAGGAA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACCTGGGGTTTTATCTGTaGAGGCGGAATTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHLGFYL*RRNSGR
Trigger: TCTGCCTGAATTCCGCCTGCACAGATAAAACCCCAG...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGCTCCGACATACTCAGTaGGGCCCCCACAGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWLRHTQ*GPHSRE
Trigger: CTCCCGGCTGTGGGGGCCCCACTGAGTATGTCGGAG...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACGGACAAAGTTCTTTGTaGCCCACTGCCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHGQSSL*PTASFP
Trigger: AGGGAAAGAGGCAGTGGGCCACAAAGAACTTTGTCC...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACCACATCTGGAACCGCTaGTTGTTGACCACGACAAAC +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHHIWNR*LLTTTN
Trigger: GTTTGTCGTGGTCAACAACCAGCGGTTCCAGATGTG...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACAGGGGGCAGGAGAAATaGGGGCTCACCTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDRGQEK*GLTSLF
Trigger: GAAGAGGGAGGTGAGCCCTCATTTCTCCTGCCCCCT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACGAATTCAGCTTGAAGTaGCTGAAACACGGGCAACTG +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHEFSLK*LKHGQL
Trigger: CAGTTGCCCGTGTTTCAGTCACTTCAAGCTGAATTC...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAGGCAGTCATGTGAGATaGAAGGCGATTCTTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLGSHVR*KAILAP
Trigger: TGGGGCAAGAATCGCCTTTCATCTCACATGACTGCC...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAGGGGACAGGTCTTTGTaGTGGGCCCCACGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITGDRSL*WAPRGR
Trigger: GCGGCCGCGTGGGGCCCAGCACAAAGACCTGTCCCC...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAATGAAAGGCGATTCTTaGCCCAGGAGGCCATTGTGG +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLMKGDS*PRRPLW
Trigger: CCACAATGGCCTCCTGGGGCAAGAATCGCCTTTCAT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTATTACTGCCCCACATCTaGAACCGCTGGTTGTTGACC +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLLLPHI*NRWLLT
Trigger: GGTCAACAACCAGCGGTTCCAGATGTGGGGCAGTAA...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTACACTTCTGCTGCTTCTaGCTTTATTTCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLHFCCF*LYFWGR
Trigger: CCGGCCCCAGAAATAAAGCCAGAAGCAGCAGAAGTG...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTATGGGGGAGAATACACTaGGCAATCACATCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLWGRIH*AITSRS
Trigger: ACTCCGAGATGTGATTGCTCAGTGTATTCTCCCCCA...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACGGCACGAGAATCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDGTRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGATTCTCGTGCC...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACCAAGAGCAAGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKPRASH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCTTGCTCTTGG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACGCGATCTCCACTCACTaGAACCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDAISTH*NLCLPG
Trigger: ACCTGGGAGGCAGAGGTTGCAGTGAGTGGAGATCGC...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAGGAGGCGGCGGCCCCTaGGGACAGGTCTTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITGGGGP*GQVFVL
Trigger: CAGCACAAAGACCTGTCCCCAGGGGCCGCCGCCTCC...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTCCTCACAACATCTTTaGCCATCTCTGAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHSSQHL*PSLRSD
Trigger: GTCAGATCTCAGAGATGGCCAAAGATGTTGTGAGGA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACGAATTGAGCCAGGGGTaGTCCAGCACTCCCTCGATG +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDELSQG*SSTPSM
Trigger: CATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTC...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTACCTCTTCTTCCATCATaGAAGTTGGCTCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLPLLPS*KLAPQA
Trigger: AGCTTGGGGAGCCAACTTCCATGATGGAAGAAGAGG...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGTATTTCTGGGGCCGGTaGTGGAGCCACTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWYFWGR*WSHCWR
Trigger: CCTCCAGCAGTGGCTCCACCACCGGCCCCAGAAATA...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 72 bp GGTGATGCCCAACGATCATGTGGGCAACATCGTGTTTaGCACGATGGAAGAGCATCTCTTGTCTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: GDAQRSCGQHRV*HDGRASLVSSD
Trigger: ATCACTGGAGACAAGAGATGCTCTTCCATCGTGCAAAACACGATGTTGCCCACATGATCGTTGGGCATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTAGGCGGAGGTTGCAGTaGGCGGAGATAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCRRRLQ*AEIVPL
Trigger: CAGTGGCACTATCTCCGCTCACTGCAACCTCCGCCT...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTCAGGCCACACAACTTaGTATCCATTAATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHSGHTT*YPLICS
Trigger: TGAGCAGATTAATGGATATCAAGTTGTGTGGCCTGA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTACACTGTCCTTTGGCTTaGTGCCAAGTAACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLHCPLA*CQVTSS
Trigger: AGAGGAAGTTACTTGGCACCAAGCCAAAGGACAGTG...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAAGCTTGGTGCTCATTTaGATGTGTCTGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLSLVLI*MCLDTA
Trigger: TGCTGTGTCCAGACACATCCAAATGAGCACCAAGCT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGTTGTGCCCGAGCTCATaGGCCATCAGGGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWLCPSS*AIRAAN
Trigger: GTTTGCAGCCCTGATGGCCCATGAGCTCGGGCACAA...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTGCCCTTCATTACAGTaGCAGTGCCCTAAATCATTA +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHCPSLQ*QCPKSL
Trigger: TAATGATTTAGGGCACTGCCACTGTAATGAAGGGCA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACTTCTGGCTTTATTTCTaGGGCCGGTGGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDFWLYF*GRWWSH
Trigger: GTGGCTCCACCACCGGCCCCAGAAATAAAGCCAGAA...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 72 bp TCCAGAGTGTTCACAAACTTCCAGCTTGGTGCTCATTaGGATGTGTCTGGACACAGCACTTACATTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SRVFTNFQLGAH*DVSGHSTYIEG
Trigger: GCCCTCAATGTAAGTGCTGTGTCCAGACACATCCAAATGAGCACCAAGCTGGAAGTTTGTGAACACTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 72 bp TTGACGTTACTGCCCCACATCTGGAACCGCTGGTTGTaGACCACGACAAACATCTCCACGTACTTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LTLLPHIWNRWL*TTTNISTYFLC
Trigger: ACACAAAAAGTACGTGGAGATGTTTGTCGTGGTCAACAACCAGCGGTTCCAGATGTGGGGCAGTAACGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 72 bp TCATTGACGTTACTGCCCCACATCTGGAACCGCTGGTaGTTGACCACGACAAACATCTCCACGTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: SLTLLPHIWNRW*LTTTNISTYFL
Trigger: CAAAAAGTACGTGGAGATGTTTGTCGTGGTCAACAACCAGCGGTTCCAGATGTGGGGCAGTAACGTCAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACAGTGCCGGTGCTGGCTaGTTCTGTGAAATAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDSAGAG*FCEIAL
Trigger: GAGAGCTATTTCACAGAATCAGCCAGCACCGGCACT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAAAGTGTAGGGCGTCGGTaGGGTAGGTATGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKSVGRR*GRYDAR
Trigger: TCTGGCATCATACCTACCTCACCGACGCCCTACACT...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAAAAGACCAAGCCATGCTaGGTCCCTTGGGAGCTACTG +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKKTKPC*VPWELL
Trigger: CAGTAGCTCCCAAGGGACTCAGCATGGCTTGGTCTT...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAATGTTCAAACCGTCTTaGAGAGTCCATGGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLMFKPS*RVHGLN
Trigger: ATTGAGCCCATGGACTCTTCAAGACGGTTTGAACAT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAATGCCGCAAAACCGCTTaGGCAGGCACCACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKCRKTA*AGTTEK
Trigger: TTTCTCAGTGGTGCCTGCTCAAGCGGTTTTGCGGCA...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTATCTCTTAGGAGTTTaGATTCCCGGTTATACTTCC +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHYLLGV*IPGYTS
Trigger: GGAAGTATAACCGGGAATGCAAACTCCTAAGAGATA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTATTGGTGCACAGTAAGTaGCATTGTGCACATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLLVHSK*HCAHLL
Trigger: AAGGAGATGTGCACAATGGCACTTACTGTGCACCAA...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAGCAGACTTTGTTTGGTaGACAGTAAGTGCCATTGTG +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLADFVW*TVSAIV
Trigger: CACAATGGCACTTACTGTGCACCAAACAAAGTCTGC...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GCTCTACAGTACAGCACAGGCCACTTCATAAAGGCCCAAAGCAGTTTGACACAGTCCTCACAACATCTTTaGCCATCTCTGAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: ALQYSTGHFIKAQSSLTQSSQHL*PSLRSD
Trigger: GTCAGATCTCAGAGATGGCCAAAGATGTTGTGAGGA...CTGTGTCAAACTGCTTTGGGCCTTTATGAAGTGGCCTGTGCTGTACTGTAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTACATTATTGGGATTCGTaGGACGTGGTTTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLHYWDS*DVVCSS
Trigger: AGAAGAGCAAACCACGTCCCACGAATCCCAATAATG...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCTCTGCTCTGCGAGCTaGAGTCTACCTGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYLCSAS*SLPASF
Trigger: AAAGCTGGCAGGTAGACTCCAGCTCGCAGAGCAGAG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACGTGACAGTACATGCTTaGCACAAAAATCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHVTVHA*HKNHQK
Trigger: CTTTTGGTGATTTTTGTGCCAAGCATGTACTGTCAC...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTGGACAGTCCTTCCACTaGGCTATCTCCTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCGQSFH*AISSLD
Trigger: GTCCAGGGAGGAGATAGCCCAGTGGAAGGACTGTCC...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACCACTGAGAAAGGCCTaGCCCATATTCTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKPLRKA*PIFCPG
Trigger: CCCTGGACAGAATATGGGCCAGGCCTTTCTCAGTGG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACTGGTGGAGCCACTGCTaGAGGAGCTTCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYWWSHC*RSFCRG
Trigger: GCCCCGGCAGAAGCTCCTCCAGCAGTGGCTCCACCA...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAAGCGCAAACCGTTCTTaGGTAGATTTCTTTACACAG +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLSANRS*VDFFTQ
Trigger: CTGTGTAAAGAAATCTACTCAAGAACGGTTTGCGCT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGCCAGATTTCTCCTTCTaGTGCCTTCTTTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWPDFSF*CLLCAS
Trigger: GGAGGCGCAAAGAAGGCATCAGAAGGAGAAATCTGG...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTGGCAGACGTATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCGRRIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATACGTCTGCC...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAAGGCAGGAGAATCACTTaGACCTGGGAGACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKGRRIT*TWETEV
Trigger: AACCTCTGTCTCCCAGGTTCAAGTGATTCTCCTGCC...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAAGGCAGAGCTTGCAGTaGGCCAAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITRQSLQ*AKIAPL
Trigger: CAGTGGCGCGATCTTGGCTCACTGCAAGCTCTGCCT...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACTGGTCTTGAACTCTTaGCCTAAGGTGATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKLVLNS*PKVICP
Trigger: CGGGCAGATCACCTTAGGTCAAGAGTTCAAGACCAG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACAATCTGCTCATTCTTTaGAACACAACATTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHNLLIL*NTTFCQ
Trigger: CTGACAGAATGTTGTGTTTCAAAGAATGAGCAGATT...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCTCTTCACCTTCAGATaGACCAGGTGCTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYLFTFR*TRCFWP
Trigger: AGGCCAGAAGCACCTGGTTCATCTGAAGGTGAAGAG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACCAGGAGACTCACGCTTaGTGTGCCATGGTGTATAAC +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDQETHA*CAMVYN
Trigger: GTTATACACCATGGCACATCAAGCGTGAGTCTCCTG...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGAGTGCCTGTAGATCATaGGGCTTCCTGCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWSACRS*GFLLPC
Trigger: ACAAGGGAGCAGGAAGCCTCATGATCTACAGGCACT...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGGAACCGCTGGTTGTTaGCCACGACAAACATCTCCA +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYGTAGC*PRQTSP
Trigger: TGGAGATGTTTGTCGTGGTCAACAACCAGCGGTTCC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACTGTTGGCCAGAGCAATaGCATCCACTACTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDCWPEQ*HPLLSG
Trigger: TCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACA...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTTTGAGCAGGCACCACTaGGAAAGGCCTGGCCCATAT +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCLSRHH*ERPGPY
Trigger: ATATGGGCCAGGCCTTTCTCAGTGGTGCCTGCTCAA...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTATCCATGCTCCAACATaGGCCATCTCCCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCIHAPT*AISLRD
Trigger: GTCCCTCAGGGAGATGGCTCATGTTGGAGCATGGAT...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAAAGCCTGCTGGATTCCTaGAACCACTGCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKSLLDS*NHCLVH
Trigger: ATGGACAAGGCAGTGGTTGCAGGAATCCAGCAGGCT...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGGGGTTGTTCACTGAGTaGAGGGGTTTGAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWGLFTE*RGLRLT
Trigger: AGTCAGCCTCAAACCCCTGCACTCAGTGAACAACCC...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACTCGTGGGACGTGGTTTaGTCTTCTATCACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDSWDVV*SSITCF
Trigger: GAAGCAGGTGATAGAAGAGCAAACCACGTCCCACGA...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGCTGGAGTGCAATGGTaGGATCTCCACTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYAGVQW*DLHSLQ
Trigger: TTGCAGTGAGTGGAGATCGCACCATTGCACTCCAGC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACCGAGATCACACCATTaGACTCCAACCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKPRSHH*TPTWAT
Trigger: TGTTGCCCAGGTTGGAGTGCAATGGTGTGATCTCGG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTCCGTGTTTCTCTTCCTaGTTCTCTCCTGGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCPCFSS*FSPGLR
Trigger: CCGAAGGCCAGGAGAGAAGCAGGAAGAGAAACACGG...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTCATTACAGTGGCAGTaGCCTAAATCATTACAAACT +
Preference number: 4 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHSLQWQ*PKSLQT
Trigger: AGTTTGTAATGATTTAGGGCACTGCCACTGTAATGA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACTCTTCGCATATCCTTTaGGATAGTCCGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDSSHIL*DSPAVV
Trigger: CACCACAGCCGGACTATCCCAAAGGATATGCGAAGA...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACTCCTCTTCCGCAGAATaGGGTTGTTCACTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDSSSAE*GCSLSA
Trigger: TGCACTCAGTGAACAACCCCATTCTGCGGAAGAGGA...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTGCTGAGGTAGGAGAATaGTGTGAACCTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCAEVGE*CEPGRQ
Trigger: CTGCCTCCCAGGTTCACACCATTCTCCTACCTCAGC...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAGTCTTGAAGAGTCCATaGGCTCAATGCTGTAAGATT +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLVLKSP*AQCCKI
Trigger: AATCTTACAGCATTGAGCCCATGGACTCTTCAAGAC...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTTGCTGGCTGATTCTGTaGAATAGCTCTCCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCCWLIL*NSSPPS
Trigger: GGAAGGGGGAGAGCTATTTCACAGAATCAGCCAGCA...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACAACACACAGGGCAATTaGAACCAGAATCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDNTQGN*NQNPES
Trigger: GGACTCTGGATTCTGGTTTCAATTGCCCTGTGTGTT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACAGCACTTTTGGAGGCTaGGGTGGGCGGATCACGAGG +
Preference number: 4 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYSTFGG*GGRITR
Trigger: CCTCGTGATCCGCCCACCTCAGCCTCCAAAAGTGCT...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAAGGCAGAGGTTGCAGTaGGCCAAGAGCAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITRQRLQ*AKSKPL
Trigger: CAGTGGCTTGCTCTTGGCTCACTGCAACCTCTGCCT...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACTTTGCAAGTCCACTGTaGCATCTATTAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDFASPL*HLLGPP
Trigger: AGGGGGACCTAATAGATGTCACAGTGGACTTGCAAA...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACCTATGTTTGGGTGTGTaGCACACATCATGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDLCLGV*HTSCAD
Trigger: GTCTGCACATGATGTGTGCCACACACCCAAACATAG...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACTTCCTGCTTTTCTCTTaGGAATTAGGGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDFLLFS*ELGGRR
Trigger: TCTCCTGCCCCCTAATTCCCAAGAGAAAAGCAGGAA...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGGTAGTCCCAGCTACTTaGAAGTCTGAGGCACGAGAA +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWVVPAT*KSEARE
Trigger: TTCTCGTGCCTCAGACTTCCAAGTAGCTGGGACTAC...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 72 bp TTTTATCTGTGCAGGCGGAATTCAGGCAGACTTTGTTaGGTGCACAGTAAGTGCCATTGTGCACATCTCCTT +
Preference number: 4 (lower is better)
Translates to: FYLCRRNSGRLC*VHSKCHCAHLL
Trigger: AAGGAGATGTGCACAATGGCACTTACTGTGCACCAAACAAAGTCTGCCTGAATTCCGCCTGCACAGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACAAATGGAAGTTTCCTTaGTGGCTTTGTCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDKWKFP*WLCPCR
Trigger: GCGACATGGACAAAGCCATCAAGGAAACTTCCATTT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACCAGCTCCCAGCTTCTaGGTCCAATTGATACTGTAT +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKPAPSF*VQLILY
Trigger: ATACAGTATCAATTGGACTCAGAAGCTGGGAGCTGG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGCAATGTTTAACAAGTaGCAGTGCCGCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYAMFNK*QCRRAK
Trigger: TTTGGCTCTGCGGCACTGTCACTTGTTAAACATTGC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAGTCTCTCCTCCGGTTTaGCCTTCAGGAGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITVSPPV*PSGASS
Trigger: TGAGGAAGCTCCTGAAGGTCAAACCGGAGGAGAGAC...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTCATGAGCCACCACGCTaGGCCTCATCTATGTTTCAA +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCHEPPR*ASSMFQ
Trigger: TTGAAACATAGATGAGGCTCAGCGTGGTGGCTCATG...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGCTCCAGTACCTGGGGTaGTACATAATAAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWLQYLG*YIIRGE
Trigger: TTCACCCCTTATTATGTAGCACCCCAGGTACTGGAG...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGGCAACATCGTGTTTTaGACGATGGAAGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYGNIVF*TMEEHL
Trigger: GAGATGCTCTTCCATCGTGCAAAACACGATGTTGCC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGAACATGGACCATCACTaGACTCTGCTTTCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWNMDHH*TLLSPS
Trigger: TGAAGGCGAAAGCAGAGTGCAGTGATGGTCCATGTT...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACTGTGGCCACTTCTGCTaGTTCTGGCTTTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYCGHFC*FWLYFW
Trigger: CCAGAAATAAAGCCAGAAGCAGCAGAAGTGGCCACA...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAATTCCATCATGGAAGTTaGCTCCCCAAGCTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKFHHGS*LPKLKC
Trigger: ACACTTGAGCTTGGGGAGCCAACTTCCATGATGGAA...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCCTGAAGATTCAGGGTaGAGGAATTACTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYPEDSG*RNYSAQ
Trigger: CTGTGCTGAGTAATTCCTCCACCCTGAATCTTCAGG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAAGCAGAATTTACTGCTaGACTAGGAATACACAAACA +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLSRIYC*TRNTQT
Trigger: TGTTTGTGTATTCCTAGTCCAGCAGTAAATTCTGCT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGTACTCAGATCTACGCTaGCTCCCTTATTGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWYSDLR*LPYWQF
Trigger: GAACTGCCAATAAGGGAGCCAGCGTAGATCTGAGTA...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACACATCCACTACTGTCTaGACCGTCTCATTGACGTTA +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDTSTTV*TVSLTL
Trigger: TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACACACTTATGACAACATaGACCATCACTGCACTCTGC +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDTLMTT*TITALC
Trigger: GCAGAGTGCAGTGATGGTCCATGTTGTCATAAGTGT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACCAGGCAGACTTTGTTTaGTGCACAGTAAGTGCCATT +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDQADFV*CTVSAI
Trigger: AATGGCACTTACTGTGCACCAAACAAAGTCTGCCTG...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 72 bp GGGCAACTGATGCTCAGAGTCAAAGGGAGTATCACTTaGGATACCTTTTCCATCGCACCTAAAATTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GQLMLRVKGSIT*DTFSIAPKIQH
Trigger: ATGCTGAATTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCATCAGTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACTACATAATAAGGGGTaGACTGGGGTGTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKLHNKG*TGVSSS
Trigger: ACTTGATGACACCCCAGTTCACCCCTTATTATGTAG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGGATCTACTTTATCTGTaGATCCACGACCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWDLLYL*IHDHSS
Trigger: GCTGGAATGGTCGTGGATTCACAGATAAAGTAGATC...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAAGCAAGCAGTCTGCAATaGCAGCCACAAAAATGTCTT +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKASSLQ*QPQKCL
Trigger: AAGACATTTTTGTGGCTGTCATTGCAGACTGCTTGC...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAAACACAGCACTTACATTaGGGGCATGAATTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKTQHLH*GHEFSL
Trigger: CAAGCTGAATTCATGCCCTCAATGTAAGTGCTGTGT...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGATAGTGGCAGTCATGTaGGATGAAAGGCGATTCTTG +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWIVAVM*DERRFL
Trigger: CAAGAATCGCCTTTCATCTCACATGACTGCCACTAT...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTGAGCTGGAGTCTACCTaGCAGCTTTTCTATGTACCA +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCELEST*QLFYVP
Trigger: TGGTACATAGAAAAGCTGGCAGGTAGACTCCAGCTC...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACAAACTTCCAGCTTGGTaGTCATTTGGATGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYKLPAW*SFGCVW
Trigger: CCAGACACATCCAAATGAGCACCAAGCTGGAAGTTT...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTACAGGAGAGCATAACCTaGTGCTTTATAAGAATTATA +
Preference number: 4 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLQESIT*CFIRII
Trigger: TATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTG...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACAGTCCATGGGCTCAATaGTGTAAGATTTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDSPWAQ*CKIFPP
Trigger: AGGAGGAAAAATCTTACAGCATTGAGCCCATGGACT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACTTCCTGAGTGTGATTTaGAAGTCCACTGTGACATCT +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDFLSVI*KSTVTS
Trigger: AGATGTCACAGTGGACTTGCAAATCACACTCAGGAA...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGAGCCATCTTGCTTATaGCTGTTGTTGGGGCATAAT +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYEPSCL*LLLGHN
Trigger: ATTATGCCCCAACAACAGGCATAAGCAAGATGGCTC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGTCATATAGGCATCCATaGTCCAACATGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWSYRHP*SNMSHL
Trigger: GAGATGGCTCATGTTGGAGCATGGATGCCTATATGA...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGTACACAGACTCTAACTaGACCACTAATTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWYTDSN*TTNSSS
Trigger: GGAGCTGGAATTAGTGGTCCAGTTAGAGTCTGTGTA...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACGTCATCAAGTCACCTTaGTCAATCTTGGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDVIKSP*SILANP
Trigger: TGGATTTGCCAAGATTGACCAAGGTGACTTGATGAC...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGCTGACTTTCAGATCCTaGATTCTCATGTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWLTFRS*ILMLAN
Trigger: GTTGGCCAACATGAGAATCCAGGATCTGAAAGTCAG...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACACAAACTTCCAGCTTaGTGCTCATTTGGATGTGTC +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKHKLPA*CSFGCV
Trigger: GACACATCCAAATGAGCACCAAGCTGGAAGTTTGTG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTTTGCATTACAACAGCTaGGGCATCCTCCAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCLHYNS*GILQSV
Trigger: AACACTCTGGAGGATGCCCCAGCTGTTGTAATGCAA...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACAAAATTAGCGGGGCGTaGTGGCAGGCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYKISGA*WQAPVI
Trigger: GATTACAGGCGCCTGCCACCACGCCCCGCTAATTTT...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGTCGTGTTTTGCACGATaGAAGAGCATCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWSCFAR*KSISCL
Trigger: GAGACAAGAGATGCTCTTCCATCGTGCAAAACACGA...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGGCTTATGCCTGTTGTTaGGGCATAATGCAGATGTAC +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWAYACC*GIMQMY
Trigger: GTACATCTGCATTATGCCCCAACAACAGGCATAAGC...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACAAAACTGCCTGTCATaGTCTTTCTTCGCATATCCT +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKQNCLS*SFFAYP
Trigger: AGGATATGCGAAGAAAGATCATGACAGGCAGTTTTG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGCTTACATTGAGGGCATaGATTCAGCTTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWLTLRA*IQLEVT
Trigger: AGTCACTTCAAGCTGAATTCATGCCCTCAATGTAAG...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACGGTCAAAATAAAAGCTaGCTAACCAGGTGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDGQNKS*LTRCLV
Trigger: AACTAGACACCTGGTTAGTCAGCTTTTATTTTGACC...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAAGTTCTTGCCCAACTCTaGTTCTTACAGAACTTCAAG +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKVLAQL*FLQNFK
Trigger: CTTGAAGTTCTGTAAGAATCAGAGTTGGGCAAGAAC...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACTCAAAATCTCTAACCTaGTACATGAAGGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDSKSLT*YMKVLV
Trigger: TACCAGGACCTTCATGTATCAGGTTAGAGATTTTGA...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAAAGAAACAAAAGAACCTaGCACTCCTTCTATGTAGCC +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKRNKRT*HSFYVA
Trigger: GGCTACATAGAAGGAGTGTCAGGTTCTTTTGTTTCT...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCTACATCAGTATATCTaGGTCAGAGCCACTAAAGCT +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYLHQYI*VRATKA
Trigger: AGCTTTAGTGGCTCTGACTCAGATATACTGATGTAG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACATGCTTCTCTGTAAAGTaGCGGTGCTGGCTGATTCTG +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITCFSVK*RCWLIL
Trigger: CAGAATCAGCCAGCACCGGCACTTTACAGAGAAGCA...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAGATTCCTGCAACCACTaGCTTGTCCATCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITDSCNH*LVHHQL
Trigger: CAGCTGATGATGGACAAGGCAGTGGTTGCAGGAATC...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACTTCCAGCAAGCAGTCTaGAATGACAGCCACAAAAAT +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYFQQAV*NDSHKN
Trigger: ATTTTTGTGGCTGTCATTGCAGACTGCTTGCTGGAA...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACAATAAACAAGATAAATaGAGCCCAGAGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDNKQDK*SPEDAN
Trigger: GTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACTTAAAGAGTAATTCCTaGCAGGCACAGTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYLKSNS*QAQWFA
Trigger: AGCAAACCACTGTGCCTGGCAGGAATTACTCTTTAA...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACATGTGCCCCTGAGACCTaGACAGATGTTGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITCAPET*TDVDRN
Trigger: GTTTCTGTCAACATCTGTGCAGGTCTCAGGGGCACA...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAATGGGCCATCAGGGCTaGAAACAACAGCACATCTTC +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITMGHQG*KQQHIF
Trigger: GAAGATGTGCTGTTGTTTGCAGCCCTGATGGCCCAT...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTACCATCACTGCACTCTaGTTTCGCCTTCAGTATACA +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCTITAL*FRLQYT
Trigger: TGTATACTGAAGGCGAAAGCAGAGTGCAGTGATGGT...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTTTCTGTGGCCACTTCTaGTGCTTCTGGCTTTATTTC +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCFCGHF*CFWLYF
Trigger: GAAATAAAGCCAGAAGCAGCAGAAGTGGCCACAGAA...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTGTCACACAACTTCACTaGGGCATCCAAAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCVTQLH*GIQRVI
Trigger: GATAACTCTTTGGATGCCCCAGTGAAGTTGTGTGAC...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACCCTGGATTCTCATGTTaGCCAACTGTTCCGCGTGAG +
Preference number: 4 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYPGFSC*PTVPRE
Trigger: CTCACGCGGAACAGTTGGCCAACATGAGAATCCAGG...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTTTTCCAAGGCAACATTaGAATCCTCGGCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCFPRQH*NPRLHS
Trigger: AGAATGGAGCCGAGGATTCCAATGTTGCCTTGGAAA...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACAAGGGAGTATCACTTTaGATACCTTTTCCATCGCAC +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYKGVSL*IPFPSH
Trigger: GTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTT...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAATCTTCCAAGGCCACTTaGTTTTTCCATAAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKSSKAT*FFHKAG
Trigger: TCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGA...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAGCAGGCAGAAATCACTaGGGTTTTATCTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITAGRNH*GFICAG
Trigger: GCCTGCACAGATAAAACCCCAGTGATTTCTGCCTGC...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 72 bp GATGTGCCATGGTGTATAACACATGTTCAAACCGTCTaGAAGAGTCCATGGGCTCAATGCTGTAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: DVPWCITHVQTV*KSPWAQCCKIF
Trigger: AAAAATCTTACAGCATTGAGCCCATGGACTCTTCAAGACGGTTTGAACATGTGTTATACACCATGGCACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACAACACTTCAATAATCTaGACTATGTTTGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDNTSII*TMFGCV
Trigger: CACACACCCAAACATAGTTCAGATTATTGAAGTGTT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGAGACCTTTCAAATATaGGATACGACTACAGAAAGG +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYETFQI*DTTTER
Trigger: CCTTTCTGTAGTCGTATCTCATATTTGAAAGGTCTC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGGAACTAAAATTGACCTaGAATGTCTGTGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWELKLT*NVCGSP
Trigger: AGGACTTCCACAGACATTTCAGGTCAATTTTAGTTC...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGAAAGAGTAATAGATTaGTCCCAGGTGACAGTACAT +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYERVID*SQVTVH
Trigger: ATGTACTGTCACCTGGGATCAATCTATTACTCTTTC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTATCTCTTGTCTCCAGTaGTTGAAATTCCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCISCLQ*LKFLSV
Trigger: CACACTCAGGAATTTCAATCACTGGAGACAAGAGAT...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACAATTGTATGACATTTTaGGCCATCTTGCTTATGCCT +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDNCMTF*AILLMP
Trigger: AGGCATAAGCAAGATGGCTCAAAATGTCATACAATT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACAAAAGACAAGGACATTaGTGTCCAAAGATGCATGTT +
Preference number: 4 (lower is better)
Translates to: RVINKINAAQRMPTQNPDKRQGH*CPKMHV
Trigger: AACATGCATCTTTGGACATCAATGTCCTTGTCTTTT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACTACTTCCAAGCCTCCTaGATTACTTCATTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYYFQAS*ITSFSF
Trigger: GAAACTGAATGAAGTAATGCAGGAGGCTTGGAAGTA...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCGGTCCTTTTTCTACTaGTGGCAAGTGATTTTTGTA +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYRSFFY*WQVIFV
Trigger: TACAAAAATCACTTGCCAGCAGTAGAAAAAGGACCG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACATTTCCTTCAAACAGCTaGTCTCGGGGCCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITFPSNS*SRGQNH
Trigger: ATGGTTTTGGCCCCGAGAGCAGCTGTTTGAAGGAAA...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGGGAATACTGAACCTCTaGCCTAAGATAGGAAAACTA +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWGILNL*PKIGKL
Trigger: TAGTTTTCCTATCTTAGGGCAGAGGTTCAGTATTCC...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAGGAAAAGAAGCCCTATaGACCCATTCCTTACGCAGT +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITGKEAL*THSLRS
Trigger: ACTGCGTAAGGAATGGGTGCATAGGGCTTCTTTTCC...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACAATCTGAACTATGTTTaGGTGTGTGGCACACATCAT +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYNLNYV*VCGTHH
Trigger: ATGATGTGTGCCACACACCCAAACATAGTTCAGATT...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTCACCTTGGTCAATCTTaGCAAATCCAAAGTCACACA +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCHLGQS*QIQSHT
Trigger: TGTGTGACTTTGGATTTGCCAAGATTGACCAAGGTG...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACGGGATTCGTGGGACGTaGTTTGCTCTTCTATCACCT +
Preference number: 4 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYGIRGT*FALLSP
Trigger: AGGTGATAGAAGAGCAAACCACGTCCCACGAATCCC...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACATGCCCAACGATCATGTaGGCAACATCGTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITCPTIM*ATSCFA
Trigger: TGCAAAACACGATGTTGCCCACATGATCGTTGGGCA...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGAGAATCCAGAGTCCTTaGTTCAACTGTTTACTAATC +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWRIQSP*FNCLLI
Trigger: GATTAGTAAACAGTTGAATCAAGGACTCTGGATTCT...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAGACCTGCACAGATGTTaGCAGAAACAAAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITDLHRC*QKQKNL
Trigger: CAGGTTCTTTTGTTTCTGTCAACATCTGTGCAGGTC...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAACACCGAACATATTGTaGCCCAGGACTGGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITTPNIL*PRTGRN
Trigger: ATTTCTACCAGTCCTGGGTCACAATATGTTCGGTGT...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACTGTCCTTTGGCTTGGTaGCAAGTAACTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYCPLAW*QVTSSS
Trigger: GGAAGAGGAAGTTACTTGGCACCAAGCCAAAGGACA...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAATTGCCGGTGAGATTTTaGCATCATGAAAAGTATTCA +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKLPVRF*HHEKYS
Trigger: TGAATACTTTTCATGATGGCAAAATCTCACCGGCAA...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCAAATTGGTCCCCTTTaGTGTTCATTGAATTGTAAC +
Preference number: 4 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYQIGPL*CSLNCN
Trigger: GTTACAATTCAATGAACAGCAAAGGGGACCAATTTG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACTCCGGCTGTGGTGTTTaGAGTAAAAAGGAGGGTATC +
Preference number: 4 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYSGCGV*SKKEGI
Trigger: GATACCCTCCTTTTTACTCCAAACACCACAGCCGGA...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACATGTTCTTCACGTCTaGAATGAGTCATATTGTGAT +
Preference number: 4 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKHVLHV*NESYCD
Trigger: ATCACAATATGACTCATTCCAGACGTGAAGAACATG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
3UTR CAA 72 bp TTCTACTTCACCAAACATCTCATTCCCACTCAGTACTaGAGGAGTTTGATATACTTGGCTTCATCTCCCTAT +
Preference number: 4 (lower is better)
Translates to: FYFTKHLIPTQY*RSLIYLASSPY
Trigger: ATAGGGAGATGAAGCCAAGTATATCAAACTCCTCAAGTACTGAGTGGGAATGAGATGTTTGGTGAAGTAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACGTGGCACACATCATGTaGAGACGTACCTCATTTCTA +
Preference number: 4 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYVAHIM*RRTSFL
Trigger: TAGAAATGAGGTACGTCTGCACATGATGTGTGCCAC...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACTTCAAGGTATGCTGTTaGATTACAACAGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYFKVCC*ITTAGA
Trigger: TGCCCCAGCTGTTGTAATGCAACAGCATACCTTGAA...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTTCACTTCCAGTTATGTaGAAATTTCGAGTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCSLPVM*KFRVAN
Trigger: GTTTGCTACTCGAAATTTGCACATAACTGGAAGTGA...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGCATAAAGCAGGATGTTaGCAGAGTCTTTTAATAATG +
Preference number: 4 (lower is better)
Translates to: GTRKLYDILSHLAYACCWHKAGC*QSLLIM
Trigger: CATTATTAAAAGACTCTGCCAACATCCTGCTTTATG...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACACCACAGTTTCCAAATTaGTCCCCTTTGCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITPQFPN*SPLLFI
Trigger: AATGAACAGCAAAGGGGACCAATTTGGAAACTGTGG...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACCTTCTTTTTCTTCTGTaGCCACTTCTGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYLLFLL*PLLLLL
Trigger: CAGAAGCAGCAGAAGTGGCCACAGAAGAAAAAGAAG...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACTGTGGAGCCCAAGTTTaGAACTTTATCTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYCGAQV*NFILAS
Trigger: AGAGGCTAAGATAAAGTTTCAAACTTGGGCTCCACA...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR TCA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACAACAGCACATCTTCATaGTGGAAGGATTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYNSTSS*WKDSTA
Trigger: AGCTGTTGAATCCTTCCATCATGAAGATGTGCTGTT...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTACTATTATTAAGTCCTaGACCCTAAATCTATACAGC +
Preference number: 4 (lower is better)
Translates to: NFILASSKATWFFHKAGCTIIKS*TLNLYS
Trigger: GCTGTATAGATTTAGGGTGCAGGACTTAATAATAGT...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR GCA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAATGCAGATGTACCATTaGAAAATTCTGGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITMQMYH*KILGDH
Trigger: GTGATCTCCCAGAATTTTGCAATGGTACATCTGCAT...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS CCA 90 bp GGCCTTGATGGCTTTGTCCATGTCGCTCTCCTCCGACATACTCAGTaGGGCCCCCACAGCCGGGAGAGGCGGAGGCTGCTCAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GLDGFVHVALLRHTQ*GPHSRERRRLLSSP
Trigger: AGGGCTGCTGAGCAGCCTCCGCCTCTCCCGGCTGTGGGGGCCCCACTGAGTATGTCGGAGGAGAGCGACATGGACAAAGCCATCAAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547305.1
CDS CCA 90 bp TTCCTTGATGGCTTTGTCCATGTCGCTCTCCTCCGACATACTCAGTaGGGCCCCCACAGCCGGGAGAGGCGGAGGCTGCTCAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: FLDGFVHVALLRHTQ*GPHSRERRRLLSSP
Trigger: AGGGCTGCTGAGCAGCCTCCGCCTCTCCCGGCTGTGGGGGCCCCACTGAGTATGTCGGAGGAGAGCGACATGGACAAAGCCATCAAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000546394.1
ENST00000550735.7
ENST00000551404.6
CDS CCA 90 bp ATCCTTGATGGCTTTGTCCATGTCGCTCTCCTCCGACATACTCAGTaGGGCCCCCACAGCCGGGAGAGGCGGAGGCTGCTCAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: ILDGFVHVALLRHTQ*GPHSRERRRLLSSP
Trigger: AGGGCTGCTGAGCAGCCTCCGCCTCTCCCGGCTGTGGGGGCCCCACTGAGTATGTCGGAGGAGAGCGACATGGACAAAGCCATCAAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CAA 90 bp ACATTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGAGGGCCTCGGTGGAATaGAGCCAGGGGTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TLSRASVELSQGWSSTPSRASVE*SQGWSS
Trigger: GCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCT...CGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CAA 90 bp TTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGATGCTTCTGATGCCTTCTTaGCGCCTCCAGTACCTGGGG +
Preference number: 5 (lower is better)
Translates to: LSRASVELSQGWSSTPSMLLMPS*RLQYLG
Trigger: CCCCAGGTACTGGAGGCGCAAAGAAGGCATCAGAAG...CATCGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CAA 90 bp AGCACATTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCGCATCCTTGATGGCTTaGTCCATGTCGCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: STLSRASVELSQGWSSTPASLMA*SMSLSS
Trigger: GGAGGAGAGCGACATGGACAAAGCCATCAAGGATGC...GGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAATGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CAA 90 bp CAGCTGAGCAGAAGGCAGCACATTATCCAGGGCCTCGGTGGAATTGAGCCAGGGAGTCTCTCCTCCGGTTaGACCTTCAGGAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: QLSRRQHIIQGLGGIEPGSLSSG*TFRSFL
Trigger: GAGGAAGCTCCTGAAGGTCAAACCGGAGGAGAGACT...CCCTGGCTCAATTCCACCGAGGCCCTGGATAATGTGCTGCCTTCTGCTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACCCCCTGGGCCGTGGCTaGTTAAATAGGCAGGCCCCT +
Preference number: 5 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHPLGRG*LNRQAP
Trigger: AGGGGCCTGCCTATTTAACAAGCCACGGCCCAGGGG...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp GGGTGGTCCAGCACTCCCTCGATGGTGAGTCTCTCCTCCGGTTTGACCTTCAGGTTCACTGGGGCATCCTaGATGGCTTTGTCCATGTCG +
Preference number: 5 (lower is better)
Translates to: GWSSTPSMVSLSSGLTFRFTGAS*MALSMS
Trigger: CGACATGGACAAAGCCATCAAGGATGCCCCAGTGAA...CCTGAAGGTCAAACCGGAGGAGAGACTCACCATCGAGGGAGTGCTGGACCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CAA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAAGGGCCTCGGTGGAATaGAGCCAGGGGTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLRASVE*SQGWSS
Trigger: GCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp ACATTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGAAGGCCCAAAGCAGTTaGACACAGATCATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TLSRASVELSQGWSSTPSKAQSS*TQIMER
Trigger: CCTCTCCATGATCTGTGTCAAACTGCTTTGGGCCTT...CGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS CCA 90 bp CCCCACTCAAAGCCACTACTGAGGGGAAGTGTAAAGAGGCACATATaGACATCAGCGGAAAGGCTGGCAGGCTGCTGCCCAAGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: PHSKPLLRGSVKRHI*TSAERLAGCCPRSL
Trigger: AAGGCTTCTTGGGCAGCAGCCTGCCAGCCTTTCCGCTGATGTCCATATGTGCCTCTTTACACTTCCCCTCAGTAGTGGCTTTGAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS GCA 90 bp TCCGGTTTGACCTTCAGGAGCCTGTGGAGAAAACGCCAACAGGGCTaGCATGCACAGTTGCTACCAAAAGGCCATAGGAAGTTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: SGLTFRSLWRKRQQG*HAQLLPKGHRKFLD
Trigger: GTCCAGGAACTTCCTATGGCCTTTTGGTAGCAACTGTGCATGGCAGCCCTGTTGGCGTTTTCTCCACAGGCTCCTGAAGGTCAAACCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552111.5
CDS CCA 90 bp CCAGGCCAACCAAAGGTCACACAACAACTAGCCCTTCTTCCCTGGTaGGGGGACAGAAATGCGAGTAAGAAATACCAGCAGGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: PGQPKVTQQLALLPW*GDRNASKKYQQEPH
Trigger: GTGGGGTTCCTGCTGGTATTTCTTACTCGCATTTCTGTCCCCCCACCAGGGAAGAAGGGCTAGTTGTTGTGTGACCTTTGGTTGGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACCCTGGGGACAGGTCTTaGTGCTGGGCCCCACGCGGC +
Preference number: 5 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYPGDRS*CWAPRG
Trigger: GCCGCGTGGGGCCCAGCACAAAGACCTGTCCCCAGG...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp ACATTATCCAGGGCCTCGGTGGAATTGAGCCAGGGGTGGTCCAGCACTCCCTCGTCACCTTGGTCAATCTaGGCAAATCCAAAGTCACAC +
Preference number: 5 (lower is better)
Translates to: TLSRASVELSQGWSSTPSSPWSI*ANPKSH
Trigger: GTGTGACTTTGGATTTGCCAAGATTGACCAAGGTGA...CGAGGGAGTGCTGGACCACCCCTGGCTCAATTCCACCGAGGCCCTGGATAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACAGGCTTCCTGCTCCCTaGTTGCCAGCTAGTAGACAC +
Preference number: 5 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHRLPAP*LPASRH
Trigger: GTGTCTACTAGCTGGCAACAAGGGAGCAGGAAGCCT...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS TCA 90 bp CTGACTTTCAGATCCTGGATTCTCATGTTGGCCAACTGTTCCGCGTaGGCCTGCTGGATTCCTGCAACCACTGCCTTGTCCATCATCAGC +
Preference number: 5 (lower is better)
Translates to: LTFRSWILMLANCSA*ACWIPATTALSIIS
Trigger: GCTGATGATGGACAAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACGCGGAACAGTTGGCCAACATGAGAATCCAGGATCTGAAAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000549875.1
ENST00000550735.7
ENST00000551404.6
ENST00000552111.5
CDS GCA 90 bp AGTGTAAAGAGGCACATATGGACATCAGCGGAAAGGCTGGCAGGCTaGTGCCCAAGAAGCCTTACAGACGGTATTGATTCACCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: SVKRHIWTSAERLAG*CPRSLTDGIDSPQP
Trigger: GGGCTGAGGTGAATCAATACCGTCTGTAAGGCTTCTTGGGCAGCAGCCTGCCAGCCTTTCCGCTGATGTCCATATGTGCCTCTTTACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS CCA 90 bp GGATACCTTTTCCATCGCACCTCCCTCTTCTTCCATCATGGAAGTTaGCTCCCCAAGCTCAAGTGTGCCTCCTGTGAGTTCCAGCAAGCA +
Preference number: 5 (lower is better)
Translates to: GYLFHRTSLFFHHGS*LPKLKCASCEFQQA
Trigger: TGCTTGCTGGAACTCACAGGAGGCACACTTGAGCTTGGGGAGCCAACTTCCATGATGGAAGAAGAGGGAGGTGCGATGGAAAAGGTATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547915.1
CDS-3UTR CAA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAAGGCACGAGAATCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLRHENR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGATTCTCGTGCCT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTGCAGAATCCCTACGCTaGCGGCCCCTGGGCCGTGGC +
Preference number: 5 (lower is better)
Translates to: NFILASSKATWFFHKAGCAESLR*RPLGRG
Trigger: GCCACGGCCCAGGGGCCGCAAGCGTAGGGATTCTGC...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS TCA 90 bp CATAGGAAGTTCCTGGACCTGGCTCTAAACAGTTCTGGTTACTTCTaGCTTCTGCAAGCCTGGGCTTTCCACCTGCAGAGCACAGATGGG +
Preference number: 5 (lower is better)
Translates to: HRKFLDLALNSSGYF*LLQAWAFHLQSTDG
Trigger: CCCATCTGTGCTCTGCAGGTGGAAAGCCCAGGCTTGCAGAAGTCAGAAGTAACCAGAACTGTTTAGAGCCAGGTCCAGGAACTTCCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552111.5
CDS TCA 90 bp AGTTCTGTAGACCATCCGGAAGCAAATGCTGGCGGCCTTGGGGAGTaGTCGAAACGTGTAGTAGTAGTAGTAGGGCTCTCTTCGTCCCAT +
Preference number: 5 (lower is better)
Translates to: SSVDHPEANAGGLGE*SKRVVVVVGLSSSH
Trigger: ATGGGACGAAGAGAGCCCTACTACTACTACTACACGTTTCGATCACTCCCCAAGGCCGCCAGCATTTGCTTCCGGATGGTCTACAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602983.1
CDS CCA 90 bp CTCTCCAAGTTCTGTAGACCATCCGGAAGCAAATGCTGGCGGCCTTaGGGAGTGATCGAAACGTGTAGTAGTAGTAGTAGGGCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LSKFCRPSGSKCWRP*GVIETCSSSSRALF
Trigger: GAAGAGAGCCCTACTACTACTACTACACGTTTCGATCACTCCCCAAGGCCGCCAGCATTTGCTTCCGGATGGTCTACAGAACTTGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602983.1
CDS-3UTR CAA 90 bp TTCCGCGTGAGCCTGCTGGATTCCTGCAACCACTGCCTTGTCCATCATCAGCTGTGTCATCAAGTCACCTaGGTCAATCTTGGCAAATCC +
Preference number: 5 (lower is better)
Translates to: FRVSLLDSCNHCLVHHQLCHQVT*VNLGKS
Trigger: GGATTTGCCAAGATTGACCAAGGTGACTTGATGACA...CAGCTGATGATGGACAAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACGCGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS-3UTR CAA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAAGTCTCTCCTCCGGTTaGACCTTCAGGAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLSLSSG*TFRSFL
Trigger: GAGGAAGCTCCTGAAGGTCAAACCGGAGGAGAGACT...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACTTCGTGGGACGTGGTTaGCTCTTCTATCACCTGCTT +
Preference number: 5 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHFVGRG*LFYHLL
Trigger: AAGCAGGTGATAGAAGAGCAAACCACGTCCCACGAA...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACGAGCGAGACTCTGTCTaGGTGGCAGCAGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYERDSV*VAAGWG
Trigger: CCCCCACCCTGCTGCCACCAAGACAGAGTCTCGCTC...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS GCA 90 bp ACTGTTCCGCGTGAGCCTGCTGGATTCCTGCAACCACTGCCTGAATaGAAACACTGCCGTCAGTTTTTCATATTCATTGCTGGGCACCTA +
Preference number: 5 (lower is better)
Translates to: TVPREPAGFLQPLPE*KHCRQFFIFIAGHL
Trigger: TAGGTGCCCAGCAATGAATATGAAAAACTGACGGCAGTGTTTGCATTCAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACGCGGAACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS GCA 90 bp GTTGGCCAACTGTTCCGCGTGAGCCTGCTGGATTCCTGCAACCACTaGCTGAATGCAAACACTGCCGTCAGTTTTTCATATTCATTGCTG +
Preference number: 5 (lower is better)
Translates to: VGQLFRVSLLDSCNH*LNANTAVSFSYSLL
Trigger: CAGCAATGAATATGAAAAACTGACGGCAGTGTTTGCATTCAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACGCGGAACAGTTGGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS-3UTR CAA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAGTTCCTGCTTTTCTCTaGGGAATTAGGGGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLVPAFL*GIRGQE
Trigger: CTCCTGCCCCCTAATTCCCAAGAGAAAAGCAGGAAC...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTACAGCTTGGTGCTCATTaGGATGTGTCTGGACACAGC +
Preference number: 5 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLQLGAH*DVSGHS
Trigger: GCTGTGTCCAGACACATCCAAATGAGCACCAAGCTG...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS GCA 90 bp CGTGAGCCTGCTGGATTCCTGCAACCACTGCCTGAATGCAAACACTaGCGTCAGTTTTTCATATTCATTGCTGGGCACCTAAAAAGCCAG +
Preference number: 5 (lower is better)
Translates to: REPAGFLQPLPECKH*RQFFIFIAGHLKSQ
Trigger: CTGGCTTTTTAGGTGCCCAGCAATGAATATGAAAAACTGACGGCAGTGTTTGCATTCAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS GCA 90 bp GATTCTCATGTTGGCCAACTGTTCCGCGTGAGCCTGCTGGATTCCTaGAACCACTGCCTGAATGCAAACACTGCCGTCAGTTTTTCATAT +
Preference number: 5 (lower is better)
Translates to: DSHVGQLFRVSLLDS*NHCLNANTAVSFSY
Trigger: ATATGAAAAACTGACGGCAGTGTTTGCATTCAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACGCGGAACAGTTGGCCAACATGAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS CCA 90 bp GCATCTCATTTATCTGCTGAGAATAGCCCCTCACCCGCCGATGAGTaGAGAGAGAACATAACGAAAGAAAGCTCTCACTCCAAAGGACCC +
Preference number: 5 (lower is better)
Translates to: ASHLSAENSPSPADE*RENITKESSHSKGP
Trigger: GGGTCCTTTGGAGTGAGAGCTTTCTTTCGTTATGTTCTCTCTCCACTCATCGGCGGGTGAGGGGCTATTCTCAGCAGATAAATGAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547915.1
CDS CCA 90 bp AAATTCCAACTCTCCAAGTTCTGTAGACCATCCGGAAGCAAATGCTaGCGGCCTTGGGGAGTGATCGAAACGTGTAGTAGTAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: KFQLSKFCRPSGSKC*RPWGVIETCSSSSR
Trigger: CCTACTACTACTACTACACGTTTCGATCACTCCCCAAGGCCGCCAGCATTTGCTTCCGGATGGTCTACAGAACTTGGAGAGTTGGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602983.1
CDS-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACCAGCGCAAACCGTTCTaGAGTAGATTTCTTTACACA +
Preference number: 5 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHQRKPF*SRFLYT
Trigger: TGTGTAAAGAAATCTACTCAAGAACGGTTTGCGCTG...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGCTTCTGATGCCTTCTTaGCGCCTCCAGTACCTGGGG +
Preference number: 5 (lower is better)
Translates to: GTRKLYDILSHLAYACCWLLMPS*RLQYLG
Trigger: CCCCAGGTACTGGAGGCGCAAAGAAGGCATCAGAAG...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS GCA 90 bp GATAAATTCCAACTCTCCAAGTTCTGTAGACCATCCGGAAGCAAATaGTGGCGGCCTTGGGGAGTGATCGAAACGTGTAGTAGTAGTAGT +
Preference number: 5 (lower is better)
Translates to: DKFQLSKFCRPSGSK*WRPWGVIETCSSSS
Trigger: ACTACTACTACTACACGTTTCGATCACTCCCCAAGGCCGCCAGCATTTGCTTCCGGATGGTCTACAGAACTTGGAGAGTTGGAATTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602983.1
CDS-3UTR CAA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAAGATGAAAGGCGATTCTaGCCCCAGGAGGCCATTGTG +
Preference number: 5 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKDERRF*PQEAIV
Trigger: CACAATGGCCTCCTGGGGCAAGAATCGCCTTTCATC...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGCCCCTAGTGAAGCTGTaGGCCAGAGCAATGACATCC +
Preference number: 5 (lower is better)
Translates to: GTRKLYDILSHLAYACCWPLVKL*ARAMTS
Trigger: GGATGTCATTGCTCTGGCCAACAGCTTCACTAGGGG...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS TCA 90 bp GAGAGATGGAGGGACGTGATGTCCAACTGGTTGAAAAATGTTGACTaGATGTGCAAAACTTCACCAGACAAGGGCTTTACTGCTAGTCCC +
Preference number: 5 (lower is better)
Translates to: ERWRDVMSNWLKNVD*MCKTSPDKGFTASP
Trigger: GGGACTAGCAGTAAAGCCCTTGTCTGGTGAAGTTTTGCACATTCAGTCAACATTTTTCAACCAGTTGGACATCACGTCCCTCCATCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547915.1
CDS-3UTR CAA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTAGTATCTCTTAGGAGTTaGCATTCCCGGTTATACTTC +
Preference number: 5 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLVSLRS*HSRLYF
Trigger: GAAGTATAACCGGGAATGCAAACTCCTAAGAGATAC...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACCAGAATCCAGAGTCCTaGATTCAACTGTTTACTAAT +
Preference number: 5 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHQNPES*IQLFTN
Trigger: ATTAGTAAACAGTTGAATCAAGGACTCTGGATTCTG...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACTTCCATCATGGAAGTaGGCTCCCCAAGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKLPSWK*APQAQV
Trigger: CACTTGAGCTTGGGGAGCCAACTTCCATGATGGAAG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp CTTCATGATGGAAGGATTCAACAGCTGCCGCAAAACCGCTTGAGCAGGCACCACAAAAAGACAAGGACATaGATGTCCAAAGATGCATGT +
Preference number: 5 (lower is better)
Translates to: LHDGRIQQLPQNRLSRHHKKTRT*MSKDAC
Trigger: ACATGCATCTTTGGACATCAATGTCCTTGTCTTTTT...GTGGTGCCTGCTCAAGCGGTTTTGCGGCAGCTGTTGAATCCTTCCATCATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS TCA 90 bp GACTCATGGGGAAACTGGACACTGTTAGCAAACACTTCAATAATCTaGACTATGTTTGGGTGTGTGGCACACATCATGTGCAGACGTACC +
Preference number: 5 (lower is better)
Translates to: DSWGNWTLLANTSII*TMFGCVAHIMCRRT
Trigger: GGTACGTCTGCACATGATGTGTGCCACACACCCAAACATAGTTCAGATTATTGAAGTGTTTGCTAACAGTGTCCAGTTTCCCCATGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546394.1
ENST00000550735.7
ENST00000551404.6
CDS CCA 90 bp GAATACACTGAGCAATCACATCTCGGAGTTTTTCCAAGGCAACATTaGAATCCTCGGCTCCATTCTCATGGTCGTGGATATAGACACTGT +
Preference number: 5 (lower is better)
Translates to: EYTEQSHLGVFPRQH*NPRLHSHGRGYRHC
Trigger: ACAGTGTCTATATCCACGACCATGAGAATGGAGCCGAGGATTCCAATGTTGCCTTGGAAAAACTCCGAGATGTGATTGCTCAGTGTATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000547067.1
ENST00000549875.1
ENST00000550735.7
ENST00000551404.6
ENST00000552111.5
CDS-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACTGTTACTTGGCTGGCTaGCTTCTCTGTAAAGTGCCG +
Preference number: 5 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYCYLAG*LLCKVP
Trigger: CGGCACTTTACAGAGAAGCAAGCCAGCCAAGTAACA...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGACACTGTCCTTTGGCTaGGTGCCAAGTAACTTCCTC +
Preference number: 5 (lower is better)
Translates to: GTRKLYDILSHLAYACCWTLSFG*VPSNFL
Trigger: GAGGAAGTTACTTGGCACCAAGCCAAAGGACAGTGT...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAAATCTGGAACCGCTGGTaGTTGACCACGACAAACATC +
Preference number: 5 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKIWNRW*LTTTNI
Trigger: GATGTTTGTCGTGGTCAACAACCAGCGGTTCCAGAT...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGGGGCAACATCGTGTTTaGCACGATGGAAGAGCATCT +
Preference number: 5 (lower is better)
Translates to: GTRKLYDILSHLAYACCWGQHRV*HDGRAS
Trigger: AGATGCTCTTCCATCGTGCAAAACACGATGTTGCCC...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTACAGTACTTGAGGAGTTaGATATACTTGGCTTCATCT +
Preference number: 5 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLQYLRS*IYLASS
Trigger: AGATGAAGCCAAGTATATCAAACTCCTCAAGTACTG...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS TCA 90 bp GAACTCAGAGTGCTCTTTTTGGCTGATAGTGGCTGCAGAATTAGTTaGAGGGTCATGAGGTTCTGGAAAAGCAGGTTGCTACCCAATATA +
Preference number: 5 (lower is better)
Translates to: ELRVLFLADSGCRIS*RVMRFWKSRLLPNI
Trigger: TATATTGGGTAGCAACCTGCTTTTCCAGAACCTCATGACCCTTCAACTAATTCTGCAGCCACTATCAGCCAAAAAGAGCACTCTGAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552111.5
CDS-3UTR CAA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACTGTCATCAAGTCACCTaGGTCAATCTTGGCAAATCC +
Preference number: 5 (lower is better)
Translates to: RVINKINAAQRMPTQNPDCHQVT*VNLGKS
Trigger: GGATTTGCCAAGATTGACCAAGGTGACTTGATGACA...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACTTTTCCAAGGCAACATaGGAATCCTCGGCTCCATTC +
Preference number: 5 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYFSKAT*ESSAPF
Trigger: GAATGGAGCCGAGGATTCCAATGTTGCCTTGGAAAA...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp CTGTTGGCCAGAGCAATGACATCCACTACTGTCTGGACCGTCTCATTGACGTTATGGAAGTCCTTGAATTaGGTTTTGATGTCAATTTCC +
Preference number: 5 (lower is better)
Translates to: LLARAMTSTTVWTVSLTLWKSLN*VLMSIS
Trigger: GGAAATTGACATCAAAACCAAATTCAAGGACTTCCA...TAACGTCAATGAGACGGTCCAGACAGTAGTGGATGTCATTGCTCTGGCCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACCCTTATTGGCAGTTCTaGCCCAACTCTGATTCTTAC +
Preference number: 5 (lower is better)
Translates to: RVINKINAAQRMPTQNPDPYWQF*PNSDSY
Trigger: GTAAGAATCAGAGTTGGGCAAGAACTGCCAATAAGG...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACATGTTCAAACCGTCTaGAAGAGTCCATGGGCTCAA +
Preference number: 5 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKHVQTV*KSPWAQ
Trigger: TTGAGCCCATGGACTCTTCAAGACGGTTTGAACATG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGTCAGGCAGACTTTGTTaGGTGCACAGTAAGTGCCAT +
Preference number: 5 (lower is better)
Translates to: GTRKLYDILSHLAYACCWSGRLC*VHSKCH
Trigger: ATGGCACTTACTGTGCACCAAACAAAGTCTGCCTGA...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS CCA 90 bp GAGCACAGATGGGATTCTAGTCTCCAACCACTTGTAGGGGTACTATaGCTTGAGGCAGTCCTTTGTATACTGGAAAAAGTGAGATTAAAA +
Preference number: 5 (lower is better)
Translates to: EHRWDSSLQPLVGVL*LEAVLCILEKVRLK
Trigger: TTTTAATCTCACTTTTTCCAGTATACAAAGGACTGCCTCAAGCCATAGTACCCCTACAAGTGGTTGGAGACTAGAATCCCATCTGTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552111.5
CDS-3UTR CAA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAGTTTCCTTGATGGCTTaGTCCATGTCGCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITVSLMA*SMSLSS
Trigger: GGAGGAGAGCGACATGGACAAAGCCATCAAGGAAAC...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAACTCAGGCCACACAACTaGATATCCATTAATCTGCTC +
Preference number: 5 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKLRPHN*ISINLL
Trigger: GAGCAGATTAATGGATATCAAGTTGTGTGGCCTGAG...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACCTTCCTGCTCCCTTGTaGCCAGCTAGTAGACACCAC +
Preference number: 5 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYLPAPL*PASRHH
Trigger: GTGGTGTCTACTAGCTGGCAACAAGGGAGCAGGAAG...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACGTCTGGACCGTCTCATaGACGTTACTGCCCCACATC +
Preference number: 5 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYVWTVS*TLLPHI
Trigger: GATGTGGGGCAGTAACGTCAATGAGACGGTCCAGAC...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACAAATAGGCAGGCCCCTTaGTGTTCTCGAAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITNRQAP*CSRRNW
Trigger: CCAGTTCCTTCGAGAACACAAAGGGGCCTGCCTATT...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS GCA 90 bp ACAGTGAGAAATAGCTGTCATGGAGTCTGGAACTCTGGAAGTTTGTaGTTTTATGAACAGTGTATAATCTCACTACGGGCAGACGAAATC +
Preference number: 5 (lower is better)
Translates to: TVRNSCHGVWNSGSL*FYEQCIISLRADEI
Trigger: GATTTCGTCTGCCCGTAGTGAGATTATACACTGTTCATAAAAGCACAAACTTCCAGAGTTCCAGACTCCATGACAGCTATTTCTCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS-3UTR CAA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACACTGAAGCTGTCATTATaGGGATTCGTGGGACGTGGT +
Preference number: 5 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITLKLSL*GFVGRG
Trigger: ACCACGTCCCACGAATCCCAATAATGACAGCTTCAG...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACAAAGGGAGTATCACTTaGGATACCTTTTCCATCGCA +
Preference number: 5 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYKGSIT*DTFSIA
Trigger: TGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTT...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTCTGTGGAGCCCAAGTTaGAAACTTTATCTTAGCCTC +
Preference number: 5 (lower is better)
Translates to: NFILASSKATWFFHKAGCLWSPS*KLYLSL
Trigger: GAGGCTAAGATAAAGTTTCAAACTTGGGCTCCACAG...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACTGGAACCGCTGGTTGTaGACCACGACAAACATCTCC +
Preference number: 5 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYWNRWL*TTTNIS
Trigger: GGAGATGTTTGTCGTGGTCAACAACCAGCGGTTCCA...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp AGGGTAATAAACAAGATAAATGCAGCCCAGAGGATGCCAACACAAAACCCAGACATGGAAGAGCATCTCTaGTCTCCAGTGATTGAAATT +
Preference number: 5 (lower is better)
Translates to: RVINKINAAQRMPTQNPDMEEHL*SPVIEI
Trigger: AATTTCAATCACTGGAGACAAGAGATGCTCTTCCAT...GTCTGGGTTTTGTGTTGGCATCCTCTGGGCTGCATTTATCTTGTTTATTACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS GCA 90 bp GTATCTCTTAGGAGTTTGCATTCCCGGTTATACTTCCAAGCCTCCTaGATTACTTCATTCAGTTTCTCATCTTCATTCTCTCCTATTGGT +
Preference number: 5 (lower is better)
Translates to: VSLRSLHSRLYFQAS*ITSFSFSSSFSPIG
Trigger: ACCAATAGGAGAGAATGAAGATGAGAAACTGAATGAAGTAATGCAGGAGGCTTGGAAGTATAACCGGGAATGCAAACTCCTAAGAGATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547915.1
CDS-3UTR CAA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTAAAATGGAAGTTTCCTaGATGGCTTTGTCCATGTCG +
Preference number: 5 (lower is better)
Translates to: NFILASSKATWFFHKAGCKMEVS*MALSMS
Trigger: CGACATGGACAAAGCCATCAAGGAAACTTCCATTTT...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACATTTCAAGGTATGCTGTaGCATTACAACAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITFQGML*HYNSWG
Trigger: GCCCCAGCTGTTGTAATGCAACAGCATACCTTGAAA...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTGGTGACAGTACATGCTaGGCACAAAAATCACCAAAA +
Preference number: 5 (lower is better)
Translates to: NFILASSKATWFFHKAGCGDSTC*AQKSPK
Trigger: TTTTGGTGATTTTTGTGCCAAGCATGTACTGTCACC...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACAGAAAGAGTAATAGATaGATCCCAGGTGACAGTACA +
Preference number: 5 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYRKSNR*IPGDST
Trigger: TGTACTGTCACCTGGGATCAATCTATTACTCTTTCT...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp AATGAGTCATATTGTGATTTTCACCTTCTCCTGAAGGTGTCCCACCTAGCTTACATTCCCACTCAGTACTaGAGGAGTTTGATATACTTG +
Preference number: 5 (lower is better)
Translates to: NESYCDFHLLLKVSHLAYIPTQY*RSLIYL
Trigger: CAAGTATATCAAACTCCTCAAGTACTGAGTGGGAAT...GTAAGCTAGGTGGGACACCTTCAGGAGAAGGTGAAAATCACAATATGACTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS TCA 90 bp TTTACACAGACTCTAACTGGACCACTAATTCCAGCTCCCAGCTTCTaGGTCCAATTGATACTGTATTCTTCTAAAATGGAAGTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: FTQTLTGPLIPAPSF*VQLILYSSKMEVSL
Trigger: CAAGGAAACTTCCATTTTAGAAGAATACAGTATCAATTGGACTCAGAAGCTGGGAGCTGGAATTAGTGGTCCAGTTAGAGTCTGTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546394.1
ENST00000550735.7
ENST00000551404.6
CDS-3UTR CAA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACATCACCTTGGTCAATCTaGGCAAATCCAAAGTCACAC +
Preference number: 5 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITSPWSI*ANPKSH
Trigger: GTGTGACTTTGGATTTGCCAAGATTGACCAAGGTGA...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp GGCACTCGTAAATTGTATGACATTTTGAGCCATCTTGCTTATGCCTGTTGTTGGTACACGAAAATTGGTTaGTTATGGAAACCCATACTC +
Preference number: 5 (lower is better)
Translates to: GTRKLYDILSHLAYACCWYTKIG*LWKPIL
Trigger: GAGTATGGGTTTCCATAACAAACCAATTTTCGTGTA...CCAACAACAGGCATAAGCAAGATGGCTCAAAATGTCATACAATTTACGAGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACGAGCTTGAGTCTAACTaGGGCAACATAGCAGGATCA +
Preference number: 5 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYELESN*GNIAGS
Trigger: TGATCCTGCTATGTTGCCCAAGTTAGACTCAAGCTC...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp GAAAATCTGTATGTGGATGTCCAAGTTTTCCCTCATTATCGTTGGTTCATAACATCTTGCTTATGCCTGTaGTTGGGGCATAATGCAGAT +
Preference number: 5 (lower is better)
Translates to: ENLYVDVQVFPHYRWFITSCLCL*LGHNAD
Trigger: ATCTGCATTATGCCCCAACAACAGGCATAAGCAAGA...TGTTATGAACCAACGATAATGAGGGAAAACTTGGACATCCACATACAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp TGCTCAGAGTCAAAGGGAGTATCACTTTGGATACCTTTTCCATCGCACCTAAAAAAATTGTATGACATTTaGAGCCATCTTGCTTATGCC +
Preference number: 5 (lower is better)
Translates to: CSESKGVSLWIPFPSHLKKLYDI*SHLAYA
Trigger: GGCATAAGCAAGATGGCTCAAAATGTCATACAATTT...TTTTAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACTATAGACACTGTCCTTaGGCTTGGTGCCAAGTAACT +
Preference number: 5 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYYRHCP*AWCQVT
Trigger: AGTTACTTGGCACCAAGCCAAAGGACAGTGTCTATA...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTTCCTTGAATTTGGTTTaGATGTCAATTTCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: NFILASSKATWFFHKAGCSLNLV*MSISLV
Trigger: CACCAAGGAAATTGACATCAAAACCAAATTCAAGGA...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACATTCCTGAGTGTGATTaGCAAGTCCACTGTGACATC +
Preference number: 5 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYIPECD*QVHCDI
Trigger: GATGTCACAGTGGACTTGCAAATCACACTCAGGAAT...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS-3UTR CAA 90 bp AACTTTATCTTAGCCTCTTCCAAGGCCACTTGGTTTTTCCATAAAGCAGGATGTCTTGTGAGGCTGATTTaGCACCATATCCATATAATT +
Preference number: 5 (lower is better)
Translates to: NFILASSKATWFFHKAGCLVRLI*HHIHII
Trigger: AATTATATGGATATGGTGCAAAATCAGCCTCACAAG...ACATCCTGCTTTATGGAAAAACCAAGTGGCCTTGGAAGAGGCTAAGATAAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS TCA 90 bp CTAAGCTCATTTCTTACTTTAGAAAGCTATCTGAGGTACACTACATaGGTTCTCTTAAAACCCAAGGAATCTAGGGAGATAGATAGGTCA +
Preference number: 5 (lower is better)
Translates to: LSSFLTLESYLRYTT*VLLKPKESREIDRS
Trigger: TGACCTATCTATCTCCCTAGATTCCTTGGGTTTTAAGAGAACTCATGTAGTGTACCTCAGATAGCTTTCTAAAGTAAGAAATGAGCTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547915.1
CDS-3UTR CAA 90 bp TCATGTAGGCAAACAGGAGAGCATAACCTGCTGCTTTATAAGAATTATATTTACAGGAGTTTGATATACTaGGCTTCATCTCCCTATTTC +
Preference number: 5 (lower is better)
Translates to: SCRQTGEHNLLLYKNYIYRSLIY*ASSPYF
Trigger: GAAATAGGGAGATGAAGCCAAGTATATCAAACTCCT...GTAAATATAATTCTTATAAAGCAGCAGGTTATGCTCTCCTGTTTGCCTACATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550735.7
CDS CCA 72 bp CGGCCGAGGGAGCAAAGGGCTCGGCACTCGGGCCCCTaGGCCTCGTGGCGACGGGCAGCAGCCGCCCCTCGG +
Preference number: 6 (lower is better)
Translates to: RPREQRARHSGP*ASWRRAAAAPR
Trigger: CCGAGGGGCGGCTGCTGCCCGTCGCCACGAGGCCCAGGGGCCCGAGTGCCGAGCCCTTTGCTCCCTCGGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546394.1
ENST00000547305.1
ENST00000550735.7
ENST00000553053.5
CDS CCA 72 bp GAGCAAAGGGCTCGGCACTCGGGCCCCTGGGCCTCGTaGCGACGGGCAGCAGCCGCCCCTCGGGACCGGTGG +
Preference number: 6 (lower is better)
Translates to: EQRARHSGPWAS*RRAAAAPRDRW
Trigger: CCACCGGTCCCGAGGGGCGGCTGCTGCCCGTCGCCACGAGGCCCAGGGGCCCGAGTGCCGAGCCCTTTGCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546394.1
ENST00000547305.1
ENST00000550735.7
ENST00000553053.5
CDS CCA 72 bp GGCTTTGTCCATGTCGCTCTCCTCCGACATACTCAGTaGGGCCCCCACAGCCGGGAGAGGCGGAGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: GFVHVALLRHTQ*GPHSRERRRLL
Trigger: GAGCAGCCTCCGCCTCTCCCGGCTGTGGGGGCCCCACTGAGTATGTCGGAGGAGAGCGACATGGACAAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000546394.1
ENST00000547305.1
ENST00000550735.7
ENST00000551404.6
ENST00000553053.5
CDS TCA 72 bp CAGCTCAGAGCCCTGACCATCTCACATGGCCAAGGCTaGGGCCACATGACCGAGGCCACAACCAGTCAAGTA +
Preference number: 6 (lower is better)
Translates to: QLRALTISHGQG*GHMTEATTSQV
Trigger: TACTTGACTGGTTGTGGCCTCGGTCATGTGGCCTCAGCCTTGGCCATGTGAGATGGTCAGGGCTCTGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS GCA 72 bp GTTGGCCAACTGTTCCGCGTGAGCCTGCTGGATTCCTaGAACCACTGCCTGAATGCAAACACTGCCGTCAGT +
Preference number: 6 (lower is better)
Translates to: VGQLFRVSLLDS*NHCLNANTAVS
Trigger: ACTGACGGCAGTGTTTGCATTCAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACGCGGAACAGTTGGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS TCA 72 bp AGATCCTGGATTCTCATGTTGGCCAACTGTTCCGCGTaGGCCTGCTGGATTCCTGCAACCACTGCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: RSWILMLANCSA*ACWIPATTALS
Trigger: GGACAAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACGCGGAACAGTTGGCCAACATGAGAATCCAGGATCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000549875.1
ENST00000550735.7
ENST00000551404.6
ENST00000552111.5
CDS CCA 72 bp AAGCCACTACTGAGGGGAAGTGTAAAGAGGCACATATaGACATCAGCGGAAAGGCTGGCAGGCTGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: KPLLRGSVKRHI*TSAERLAGCCP
Trigger: TGGGCAGCAGCCTGCCAGCCTTTCCGCTGATGTCCATATGTGCCTCTTTACACTTCCCCTCAGTAGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS TCA 72 bp GACCATCCGGAAGCAAATGCTGGCGGCCTTGGGGAGTaGTCGAAACGTGTAGTAGTAGTAGTAGGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: DHPEANAGGLGE*SKRVVVVVGLS
Trigger: AGAGAGCCCTACTACTACTACTACACGTTTCGATCACTCCCCAAGGCCGCCAGCATTTGCTTCCGGATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602983.1
CDS GCA 72 bp TGTGGAGAAAACGCCAACAGGGCTGCCATGCACAGTTaGTACCAAAAGGCCATAGGAAGTTCCTGGACCTGG +
Preference number: 6 (lower is better)
Translates to: CGENANRAAMHS*YQKAIGSSWTW
Trigger: CCAGGTCCAGGAACTTCCTATGGCCTTTTGGTAGCAACTGTGCATGGCAGCCCTGTTGGCGTTTTCTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552111.5
CDS GCA 72 bp ACCTTCAGGAGCCTGTGGAGAAAACGCCAACAGGGCTaGCATGCACAGTTGCTACCAAAAGGCCATAGGAAG +
Preference number: 6 (lower is better)
Translates to: TFRSLWRKRQQG*HAQLLPKGHRK
Trigger: CTTCCTATGGCCTTTTGGTAGCAACTGTGCATGGCAGCCCTGTTGGCGTTTTCTCCACAGGCTCCTGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552111.5
CDS CAA 72 bp CTGTGGAGAAAACGCCAACAGGGCTGCCATGCACAGTaGCTACCAAAAGGCCATAGGAAGTTCCTGGACCTG +
Preference number: 6 (lower is better)
Translates to: LWRKRQQGCHAQ*LPKGHRKFLDL
Trigger: CAGGTCCAGGAACTTCCTATGGCCTTTTGGTAGCAACTGTGCATGGCAGCCCTGTTGGCGTTTTCTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552111.5
CDS CAA 90 bp TTCAGGAGCCTGTGGAGAAAACGCCAACAGGGCTGCCATGCACAGTaGCTACCAAAAGGCCATAGGAAGTTCCTGGACCTGGCTCTAAAC +
Preference number: 6 (lower is better)
Translates to: FRSLWRKRQQGCHAQ*LPKGHRKFLDLALN
Trigger: GTTTAGAGCCAGGTCCAGGAACTTCCTATGGCCTTTTGGTAGCAACTGTGCATGGCAGCCCTGTTGGCGTTTTCTCCACAGGCTCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552111.5
CDS TCA 72 bp TGGAAGTTGGCTCCCCAAGCTCAAGTGTGCCTCCTGTaGGTTCCAGCAAGCAGTCTGCTTCACAATTTCTGC +
Preference number: 6 (lower is better)
Translates to: WKLAPQAQVCLL*VPASSLLHNFC
Trigger: GCAGAAATTGTGAAGCAGACTGCTTGCTGGAACTCACAGGAGGCACACTTGAGCTTGGGGAGCCAACTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547915.1
CDS TCA 72 bp AGAAGCCTTACAGACGGTATTGATTCACCTCAGCCCTaGCAGCTCAGAGCCCTGACCATCTCACATGGCCAA +
Preference number: 6 (lower is better)
Translates to: RSLTDGIDSPQP*QLRALTISHGQ
Trigger: TTGGCCATGTGAGATGGTCAGGGCTCTGAGCTGTCAGGGCTGAGGTGAATCAATACCGTCTGTAAGGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS GCA 72 bp AGGCACATATGGACATCAGCGGAAAGGCTGGCAGGCTaGTGCCCAAGAAGCCTTACAGACGGTATTGATTCA +
Preference number: 6 (lower is better)
Translates to: RHIWTSAERLAG*CPRSLTDGIDS
Trigger: TGAATCAATACCGTCTGTAAGGCTTCTTGGGCAGCAGCCTGCCAGCCTTTCCGCTGATGTCCATATGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS GCA 72 bp CAACTCTCCAAGTTCTGTAGACCATCCGGAAGCAAATaGTGGCGGCCTTGGGGAGTGATCGAAACGTGTAGT +
Preference number: 6 (lower is better)
Translates to: QLSKFCRPSGSK*WRPWGVIETCS
Trigger: ACTACACGTTTCGATCACTCCCCAAGGCCGCCAGCATTTGCTTCCGGATGGTCTACAGAACTTGGAGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602983.1
CDS CCA 72 bp ATACCTTTTCCATCGCACCTCCCTCTTCTTCCATCATaGAAGTTGGCTCCCCAAGCTCAAGTGTGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: IPFPSHLPLLPS*KLAPQAQVCLL
Trigger: CAGGAGGCACACTTGAGCTTGGGGAGCCAACTTCCATGATGGAAGAAGAGGGAGGTGCGATGGAAAAGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547915.1
CDS CCA 72 bp CTCTCCAAGTTCTGTAGACCATCCGGAAGCAAATGCTaGCGGCCTTGGGGAGTGATCGAAACGTGTAGTAGT +
Preference number: 6 (lower is better)
Translates to: LSKFCRPSGSKC*RPWGVIETCSS
Trigger: ACTACTACACGTTTCGATCACTCCCCAAGGCCGCCAGCATTTGCTTCCGGATGGTCTACAGAACTTGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602983.1
CDS GCA 72 bp CTGTTCCGCGTGAGCCTGCTGGATTCCTGCAACCACTaGCTGAATGCAAACACTGCCGTCAGTTTTTCATAT +
Preference number: 6 (lower is better)
Translates to: LFRVSLLDSCNH*LNANTAVSFSY
Trigger: ATATGAAAAACTGACGGCAGTGTTTGCATTCAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACGCGGAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS CCA 72 bp CCAAAGGTCACACAACAACTAGCCCTTCTTCCCTGGTaGGGGGACAGAAATGCGAGTAAGAAATACCAGCAG +
Preference number: 6 (lower is better)
Translates to: PKVTQQLALLPW*GDRNASKKYQQ
Trigger: CTGCTGGTATTTCTTACTCGCATTTCTGTCCCCCCACCAGGGAAGAAGGGCTAGTTGTTGTGTGACCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS CCA 72 bp TTCTGTAGACCATCCGGAAGCAAATGCTGGCGGCCTTaGGGAGTGATCGAAACGTGTAGTAGTAGTAGTAGG +
Preference number: 6 (lower is better)
Translates to: FCRPSGSKCWRP*GVIETCSSSSR
Trigger: CCTACTACTACTACTACACGTTTCGATCACTCCCCAAGGCCGCCAGCATTTGCTTCCGGATGGTCTACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602983.1
CDS CAA 90 bp GCTCTACAGTACAGCACAGGCCACTTCATAAAGGCCCAAAGCAGTTaGACACAGATCATGGAGAGGACTTGTTGTAAGTGTAGGGCGTCG +
Preference number: 6 (lower is better)
Translates to: ALQYSTGHFIKAQSS*TQIMERTCCKCRAS
Trigger: CGACGCCCTACACTTACAACAAGTCCTCTCCATGATCTGTGTCAAACTGCTTTGGGCCTTTATGAAGTGGCCTGTGCTGTACTGTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS CCA 72 bp TTATCTGCTGAGAATAGCCCCTCACCCGCCGATGAGTaGAGAGAGAACATAACGAAAGAAAGCTCTCACTCC +
Preference number: 6 (lower is better)
Translates to: LSAENSPSPADE*RENITKESSHS
Trigger: GGAGTGAGAGCTTTCTTTCGTTATGTTCTCTCTCCACTCATCGGCGGGTGAGGGGCTATTCTCAGCAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547915.1
CDS CAA 72 bp GGGCAACTGATGCTCAGAGTCAAAGGGAGTATCACTTaGGATACCTTTTCCATCGCACCTCCCTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: GQLMLRVKGSIT*DTFSIAPPSSS
Trigger: GGAAGAAGAGGGAGGTGCGATGGAAAAGGTATCCAAAGTGATACTCCCTTTGACTCTGAGCATCAGTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547915.1
CDS TCA 72 bp TCATGGAGAGGACTTGTTGTAAGTGTAGGGCGTCGGTaGGGTAGGTATGATGCCAGATTTCTCCTTCTGATG +
Preference number: 6 (lower is better)
Translates to: SWRGLVVSVGRR*GRYDARFLLLM
Trigger: CATCAGAAGGAGAAATCTGGCATCATACCTACCTCACCGACGCCCTACACTTACAACAAGTCCTCTCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS GCA 72 bp CGTGAGCCTGCTGGATTCCTGCAACCACTGCCTGAATaGAAACACTGCCGTCAGTTTTTCATATTCATTGCT +
Preference number: 6 (lower is better)
Translates to: REPAGFLQPLPE*KHCRQFFIFIA
Trigger: AGCAATGAATATGAAAAACTGACGGCAGTGTTTGCATTCAGGCAGTGGTTGCAGGAATCCAGCAGGCTCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS CCA 72 bp GAGCAATCACATCTCGGAGTTTTTCCAAGGCAACATTaGAATCCTCGGCTCCATTCTCATGGTCGTGGATAT +
Preference number: 6 (lower is better)
Translates to: EQSHLGVFPRQH*NPRLHSHGRGY
Trigger: ATATCCACGACCATGAGAATGGAGCCGAGGATTCCAATGTTGCCTTGGAAAAACTCCGAGATGTGATTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000547067.1
ENST00000549875.1
ENST00000550735.7
ENST00000551404.6
ENST00000552111.5
CDS CCA 72 bp GACACCTGGTCAACCAAAGACCAAAAAGTGGGAGAGTaGGCTACTTTCTCTCCCCTAAGCTCATTTCTTACT +
Preference number: 6 (lower is better)
Translates to: DTWSTKDQKVGE*ATFSPLSSFLT
Trigger: AGTAAGAAATGAGCTTAGGGGAGAGAAAGTAGCCCACTCTCCCACTTTTTGGTCTTTGGTTGACCAGGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547915.1
CDS TCA 72 bp CATGACCGAGGCCACAACCAGTCAAGTAATTTACAGTaGGAAATAGCTGTCATGGAGTCTGGAACTCTGGAA +
Preference number: 6 (lower is better)
Translates to: HDRGHNQSSNLQ*EIAVMESGTLE
Trigger: TTCCAGAGTTCCAGACTCCATGACAGCTATTTCTCACTGTAAATTACTTGACTGGTTGTGGCCTCGGTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS CCA 72 bp TGGGATTCTAGTCTCCAACCACTTGTAGGGGTACTATaGCTTGAGGCAGTCCTTTGTATACTGGAAAAAGTG +
Preference number: 6 (lower is better)
Translates to: WDSSLQPLVGVL*LEAVLCILEKV
Trigger: CACTTTTTCCAGTATACAAAGGACTGCCTCAAGCCATAGTACCCCTACAAGTGGTTGGAGACTAGAATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552111.5
CDS CAA 72 bp TACAGCACAGGCCACTTCATAAAGGCCCAAAGCAGTTaGACACAGATCATGGAGAGGACTTGTTGTAAGTGT +
Preference number: 6 (lower is better)
Translates to: YSTGHFIKAQSS*TQIMERTCCKC
Trigger: ACACTTACAACAAGTCCTCTCCATGATCTGTGTCAAACTGCTTTGGGCCTTTATGAAGTGGCCTGTGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553053.5
CDS TCA 72 bp ATGGAGGGACGTGATGTCCAACTGGTTGAAAAATGTTaGCTGAATGTGCAAAACTTCACCAGACAAGGGCTT +
Preference number: 6 (lower is better)
Translates to: MEGRDVQLVEKC*LNVQNFTRQGL
Trigger: AAGCCCTTGTCTGGTGAAGTTTTGCACATTCAGTCAACATTTTTCAACCAGTTGGACATCACGTCCCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547915.1
CDS TCA 72 bp GGAAACTGGACACTGTTAGCAAACACTTCAATAATCTaGACTATGTTTGGGTGTGTGGCACACATCATGTGC +
Preference number: 6 (lower is better)
Translates to: GNWTLLANTSII*TMFGCVAHIMC
Trigger: GCACATGATGTGTGCCACACACCCAAACATAGTTCAGATTATTGAAGTGTTTGCTAACAGTGTCCAGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546394.1
ENST00000550735.7
ENST00000551404.6
CDS CCA 72 bp ACTGTTAGCAAACACTTCAATAATCTGAACTATGTTTaGGTGTGTGGCACACATCATGTGCAGACGTACCTC +
Preference number: 6 (lower is better)
Translates to: TVSKHFNNLNYV*VCGTHHVQTYL
Trigger: GAGGTACGTCTGCACATGATGTGTGCCACACACCCAAACATAGTTCAGATTATTGAAGTGTTTGCTAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546394.1
ENST00000550735.7
ENST00000551404.6
CDS CCA 72 bp GCTTTAACTTCCAAAAGGAACTCAGAGTGCTCTTTTTaGCTGATAGTGGCTGCAGAATTAGTTGAAGGGTCA +
Preference number: 6 (lower is better)
Translates to: ALTSKRNSECSF*LIVAAELVEGS
Trigger: TGACCCTTCAACTAATTCTGCAGCCACTATCAGCCAAAAAGAGCACTCTGAGTTCCTTTTGGAAGTTAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552111.5
CDS CAA 72 bp ATAATAAGGGGTGAACTGGGGTGTCATCAAGTCACCTaGGTCAATCTTGGCAAATCCAAAGTCACACAACTT +
Preference number: 6 (lower is better)
Translates to: IIRGELGCHQVT*VNLGKSKVTQL
Trigger: AAGTTGTGTGACTTTGGATTTGCCAAGATTGACCAAGGTGACTTGATGACACCCCAGTTCACCCCTTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000549875.1
ENST00000550735.7
ENST00000551404.6
ENST00000553053.5
CDS CAA 72 bp TGGACGATCAAGAAGAATTTTCAGCGCAAACCGTTCTaGAGTAGATTTCTTTACACAGACTCTAACTGGACC +
Preference number: 6 (lower is better)
Translates to: WTIKKNFQRKPF*SRFLYTDSNWT
Trigger: GGTCCAGTTAGAGTCTGTGTAAAGAAATCTACTCAAGAACGGTTTGCGCTGAAAATTCTTCTTGATCGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546394.1
ENST00000550735.7
ENST00000551404.6
CDS CAA 90 bp TTTACAGTGAGAAATAGCTGTCATGGAGTCTGGAACTCTGGAAGTTaGTGCTTTTATGAACAGTGTATAATCTCACTACGGGCAGACGAA +
Preference number: 6 (lower is better)
Translates to: FTVRNSCHGVWNSGS*CFYEQCIISLRADE
Trigger: TTCGTCTGCCCGTAGTGAGATTATACACTGTTCATAAAAGCACAAACTTCCAGAGTTCCAGACTCCATGACAGCTATTTCTCACTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547067.1
CDS CAA 90 bp TCTAGCTTTTGGACGATCAAGAAGAATTTTCAGCGCAAACCGTTCTaGAGTAGATTTCTTTACACAGACTCTAACTGGACCACTAATTCC +
Preference number: 6 (lower is better)
Translates to: SSFWTIKKNFQRKPF*SRFLYTDSNWTTNS
Trigger: GGAATTAGTGGTCCAGTTAGAGTCTGTGTAAAGAAATCTACTCAAGAACGGTTTGCGCTGAAAATTCTTCTTGATCGTCCAAAAGCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546394.1
ENST00000550735.7
ENST00000551404.6
CDS TCA 72 bp ACTCTAACTGGACCACTAATTCCAGCTCCCAGCTTCTaGGTCCAATTGATACTGTATTCTTCTAAAATGGAA +
Preference number: 6 (lower is better)
Translates to: TLTGPLIPAPSF*VQLILYSSKME
Trigger: TTCCATTTTAGAAGAATACAGTATCAATTGGACTCAGAAGCTGGGAGCTGGAATTAGTGGTCCAGTTAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546394.1
ENST00000550735.7
ENST00000551404.6
CDS GCA 72 bp GCCCTTGTTGTCAAACTAAGAAAACACAAAATTGCATaGTTGCACCTGACACTGCCAATTAAGTCTAAACTA +
Preference number: 6 (lower is better)
Translates to: ALVVKLRKHKIA*LHLTLPIKSKL
Trigger: TAGTTTAGACTTAATTGGCAGTGTCAGGTGCAAGCATGCAATTTTGTGTTTTCTTAGTTTGACAACAAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547915.1
CDS TCA 72 bp TTTCTTACTTTAGAAAGCTATCTGAGGTACACTACATaGGTTCTCTTAAAACCCAAGGAATCTAGGGAGATA +
Preference number: 6 (lower is better)
Translates to: FLTLESYLRYTT*VLLKPKESREI
Trigger: TATCTCCCTAGATTCCTTGGGTTTTAAGAGAACTCATGTAGTGTACCTCAGATAGCTTTCTAAAGTAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547915.1