RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAPKAPK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000114738

Ensembl transcript IDs: ENST00000357955.6, ENST00000430409.5, ENST00000446044.5, ENST00000451680.1, ENST00000457064.1, ENST00000486712.5, ENST00000497283.1, ENST00000621469.5

Found 368 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGCGCTGAGTGCCATCTGGGCTGGGGCTGCAGCAAGGCAGGGCTaGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGG +
Preference number: 1 (lower is better)
Translates to: RALSAIWAGAAARQG*TAQGGRQTGSSSLR
Trigger: CCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCTGCCTTGCTGCAGCCCCAGCCCAGATGGCACTCAGCGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR GCA 90 bp GGGAAGCCCAGCCACAACTCCCAGTGGCCTAGAAAGCTAAGGCCATaGACCAGGGCAGGACAGCACAGAGGCCTCACTCGGGCCAACCTA +
Preference number: 1 (lower is better)
Translates to: GKPSHNSQWPRKLRP*TRAGQHRGLTRANL
Trigger: TAGGTTGGCCCGAGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCACTGGGAGTTGTGGCTGGGCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR CCA 90 bp CTCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTaGAAGATGGGAAGCCCAGCCACAACTCCCAGTGGCCTAGAAAGC +
Preference number: 1 (lower is better)
Translates to: LKARPICPSHREMSL*KMGSPATTPSGLES
Trigger: GCTTTCTAGGCCACTGGGAGTTGTGGCTGGGCTTCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR TCA 90 bp CCTAGGCCCTGCCCATCTCTAGGGCTTGAGCCTGGGCCAGAGATCTaGAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCCGAGT +
Preference number: 1 (lower is better)
Translates to: PRPCPSLGLEPGPEI*RRFRVRVLHPEVPS
Trigger: ACTCGGAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAGGCTCAAGCCCTAGAGATGGGCAGGGCCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR TCA 90 bp GAGGGCCAGCCAGTGTGTGAGAAATCAGCCTCCCCAAGGCAGAGGTaGACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATT +
Preference number: 1 (lower is better)
Translates to: EGQPVCEKSASPRQR*TLNRPSSLTRSLSI
Trigger: AATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR GCA 90 bp CCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTaGCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGAAGCCCA +
Preference number: 1 (lower is better)
Translates to: PWQPMANAFLKARPI*PSHREMSLWKMGSP
Trigger: TGGGCTTCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR CCA 90 bp GGAGATGTCTCTGTGGAAGATGGGAAGCCCAGCCACAACTCCCAGTaGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGA +
Preference number: 1 (lower is better)
Translates to: GDVSVEDGKPSHNSQ*PRKLRPCTRAGQHR
Trigger: TCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCACTGGGAGTTGTGGCTGGGCTTCCCATCTTCCACAGAGACATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR CCA 90 bp TCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTaGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: SLTRSLSIHRQQRGP*SPWQPMANAFLKAR
Trigger: CCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR CCA 90 bp CCCCTCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTaGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAA +
Preference number: 1 (lower is better)
Translates to: PLLPYSLTQHSQAAT*SLVTMATNGQCLSQ
Trigger: TTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR TCA 90 bp GGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCCTCAGGGGAGAGCGCTaGGTGCCATCTGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GVGLVSSDQPGKALSALLLRGER*VPSGLG
Trigger: CCCCAGCCCAGATGGCACTCAGCGCTCTCCCCTGAG...GAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR CCA 90 bp GATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCAGGCCCAAGCCAGGACCAGACGAGTGCCATCTGGGCTaGGGCTGCAGCAAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: DQPGKALSALLRPKPGPDECHLG*GCSKAG
Trigger: CCCTGCCTTGCTGCAGCCCCAGCCCAGATGGCACTC...GTCTGGTCCTGGCTTGGGCCTGAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR CCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCGACCCTGGGCCCTCCTaGCCAGGGCCTGAGCACATT +
Preference number: 2 (lower is better)
Translates to: GPWSPWQPMANAFLKARPDPGPS*PGPEHI
Trigger: AATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTC...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR TCA 90 bp GGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCGGGCCAGCCAGTGTGTaGGAAATCAGCCTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: GVGLVSSDQPGKALSALLGPASV*EISLPK
Trigger: CTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCC...GAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR CCA 90 bp TACCATGGTGGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCGCTGAGTGCCATCTaGGCTGGGGCTGCAGCAAGG +
Preference number: 2 (lower is better)
Translates to: YHGGVGLVSSDQPGKALSALSAI*AGAAAR
Trigger: CCTTGCTGCAGCCCCAGCCCAGATGGCACTCAGCGC...AGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCCACCATGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR CCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCGACCCTGGGCCCTCCTaGCCAGGGCCTGAGCACATT +
Preference number: 2 (lower is better)
Translates to: WSPWQPMANAFLKARPICDPGPS*PGPEHI
Trigger: AATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTC...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR TCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCGTCTGTTATGCAGGCTaGGAGGCCAGGCTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: GPWSPWQPMANAFLKARPVCYAG*EARLLQ
Trigger: TTGGAGGAGCCTGGCCTCTCAGCCTGCATAACAGAC...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR TCA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCCCTGGGCCAGAGATCTaGAGGAGGTTTAGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGPGPEI*RRFRVR
Trigger: CCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAGG...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR TCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCCCTGGGCCAGAGATCTaGAGGAGGTTTAGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: GPWSPWQPMANAFLKARPPGPEI*RRFRVR
Trigger: CCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAGG...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR TCA 90 bp GGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCCAGGACCAGACATTCTaGGCATGGCTCAGTCGCCTT +
Preference number: 2 (lower is better)
Translates to: GVGLVSSDQPGKALSALLQDQTF*AWLSRL
Trigger: AAGGCGACTGAGCCATGCTCAGAATGTCTGGTCCTG...GAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR CCA 90 bp CCTGACTTCAACAGAGAGGGGCTTTCCTGCCTGAGATCTGGTGAGCAGATGGGTGAGTGCCATCTGGGCTaGGGCTGCAGCAAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: PDFNREGLSCLRSGEQMGECHLG*GCSKAG
Trigger: CCCTGCCTTGCTGCAGCCCCAGCCCAGATGGCACTC...ACCCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCTCTCTGTTGAAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR TCA 90 bp TACCATGGTGGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGTCTGTTATGCAGGCTaGGAGGCCAGGCTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: YHGGVGLVSSDQPGKALSVCYAG*EARLLQ
Trigger: TTGGAGGAGCCTGGCCTCTCAGCCTGCATAACAGAC...AGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCCACCATGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR TCA 90 bp GATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCAGGCCCAAGCCAGGACCAGACCTTTTGTTAAAAGAATaGCCCTGGGCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: DQPGKALSALLRPKPGPDLLLKE*PWALLA
Trigger: GGCCAGGAGGGCCCAGGGTCATTCTTTTAACAAAAG...GTCTGGTCCTGGCTTGGGCCTGAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR TCA 90 bp TGGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGAGGCCTCACTCCTGGGCCAGAGATCTaGAGGAGGTTTAGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: WPRKLRPCTRAGQHRGLTPGPEI*RRFRVR
Trigger: CCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAGG...AGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR GCA 90 bp CCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGGCAACCAATGGCCAATaGCTTTCTCAAGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PKAEVNPQSPLLPYSLTQATNGQ*LSQGQA
Trigger: GGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGC...CTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR CCA 90 bp CAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCCGAGTGGACCCTGGGCCCTCCTaGCCAGGGCCTGAGCACATT +
Preference number: 2 (lower is better)
Translates to: QRSEGGLGSGSSILKFRVDPGPS*PGPEHI
Trigger: AATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTC...CACTCGGAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR CCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCAGGGAGATGTCTCTGTaGAAGATGGGAAGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: GPWSPWQPMANAFLKARPREMSL*KMGSPA
Trigger: GGCTGGGCTTCCCATCTTCCACAGAGACATCTCCCT...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR TCA 90 bp TCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCAGTCTGTTATGCAGGCTaGGAGGCCAGGCTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: SSLTRSLSIHRQQRGPWSVCYAG*EARLLQ
Trigger: TTGGAGGAGCCTGGCCTCTCAGCCTGCATAACAGAC...TGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR TCA 90 bp CCCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCACTTTTGTTAAAAGAATaGCCCTGGGCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: PQGRGEPSIAPPPLLAHSLLLKE*PWALLA
Trigger: GGCCAGGAGGGCCCAGGGTCATTCTTTTAACAAAAG...TGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR GCA 90 bp ATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCAGAAAGCTAAGGCCATaGACCAGGGCAGGACAGCAC +
Preference number: 2 (lower is better)
Translates to: IAPPPLLAHSAFTGSNVVRKLRP*TRAGQH
Trigger: GTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCT...GACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR CCA 90 bp CCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGAGCCACAACTCCCAGTaGCCTAGAAAGCTAAGGCCA +
Preference number: 2 (lower is better)
Translates to: PKAEVNPQSPLLPYSLTQSHNSQ*PRKLRP
Trigger: TGGCCTTAGCTTTCTAGGCCACTGGGAGTTGTGGCT...CTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR CCA 90 bp AGGAGTGAGAATGAGAGGGCCAGCCAGTGTGTGAGAAATCAGCCTCCCCAAGGCTCACAGGCAGCAACGTaGTCCCTGGTCACCATGGCA +
Preference number: 2 (lower is better)
Translates to: RSENERASQCVRNQPPQGSQAAT*SLVTMA
Trigger: TGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGA...GCCTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCCTCTCATTCTCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR CCA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGGCGCTGAGTGCCATCTaGGCTGGGGCTGCAGCAAGG +
Preference number: 2 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQALSAI*AGAAAR
Trigger: CCTTGCTGCAGCCCCAGCCCAGATGGCACTCAGCGC...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR TCA 90 bp CTGGGCCAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCGTCTGTTATGCAGGCTaGGAGGCCAGGCTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: LGQRSEGGLGSGSSILKFVCYAG*EARLLQ
Trigger: TTGGAGGAGCCTGGCCTCTCAGCCTGCATAACAGAC...GAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR TCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCTCCTGGCCAGGGCCTaGGCACATTTCAGTCTGTTA +
Preference number: 2 (lower is better)
Translates to: WSPWQPMANAFLKARPICLLARA*AHFSLL
Trigger: TAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAG...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR TCA 90 bp ATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCTTTTGTTAAAAGAATaGCCCTGGGCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: IAPPPLLAHSAFTGSNVVLLLKE*PWALLA
Trigger: GGCCAGGAGGGCCCAGGGTCATTCTTTTAACAAAAG...GACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR TCA 90 bp TACCATGGTGGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTCTTTTGTTAAAAGAATaGCCCTGGGCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: YHGGVGLVSSDQPGKALSLLLKE*PWALLA
Trigger: GGCCAGGAGGGCCCAGGGTCATTCTTTTAACAAAAG...AGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCCACCATGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR GCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCAGAAAGCTAAGGCCATaGACCAGGGCAGGACAGCAC +
Preference number: 2 (lower is better)
Translates to: WSPWQPMANAFLKARPICRKLRP*TRAGQH
Trigger: GTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCT...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR GCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAAAGAAAGCTAAGGCCATaGACCAGGGCAGGACAGCAC +
Preference number: 2 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQRKLRP*TRAGQH
Trigger: GTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCT...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR GCA 90 bp AGGAGTGAGAATGAGAGGGCCAGCCAGTGTGTGAGAAATCAGCCTCCCCAAGGCGCAACCAATGGCCAATaGCTTTCTCAAGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: RSENERASQCVRNQPPQGATNGQ*LSQGQA
Trigger: GGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGC...GCCTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCCTCTCATTCTCACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR GCA 90 bp CCTGACTTCAACAGAGAGGGGCTTTCCTGCCTGAGATCTGGTGAGCAGATGGGTAGAAAGCTAAGGCCATaGACCAGGGCAGGACAGCAC +
Preference number: 2 (lower is better)
Translates to: PDFNREGLSCLRSGEQMGRKLRP*TRAGQH
Trigger: GTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCT...ACCCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCTCTCTGTTGAAGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR TCA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGCCTGGGCCAGAGATCTaGAGGAGGTTTAGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQPGPEI*RRFRVR
Trigger: CCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAGG...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR TCA 90 bp AACCCAGCAGTGTTGTCCTATCTGACATGGTCTAGGGTTTCCCAGCCAGTGAGAAGGGGCTTTCCTGCCTaGGATCTGGTGAGCAGATGG +
Preference number: 2 (lower is better)
Translates to: NPAVLSYLTWSRVSQPVRRGFPA*DLVSRW
Trigger: CCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCT...TCTCACTGGCTGGGAAACCCTAGACCATGTCAGATAGGACAACACTGCTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR CCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATCACCATGGCAACCAATaGCCAATGCCTTTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHHHGNQ*PMPFSR
Trigger: CCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTG...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR-3UTR CCA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGGGTCCCTGGTCACCATaGCAACCAATGGCCAATGCC +
Preference number: 2 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQGPWSP*QPMANA
Trigger: GGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR CCA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGTCACAGGCAGCAACGTaGTCCCTGGTCACCATGGCA +
Preference number: 2 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQSQAAT*SLVTMA
Trigger: TGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGA...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR CCA 90 bp AACCCAGCAGTGTTGTCCTATCTGACATGGTCTAGGGTTTCCCAGCCAGTGAGAACCCTAAGGCTACCATaGTGGGGTGGGGCTGGTAAG +
Preference number: 2 (lower is better)
Translates to: NPAVLSYLTWSRVSQPVRTLRLP*WGGAGK
Trigger: CTTACCAGCCCCACCCCACCATGGTAGCCTTAGGGT...TCTCACTGGCTGGGAAACCCTAGACCATGTCAGATAGGACAACACTGCTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR GCA 90 bp AATGGTGTTTATTACTATCTGGATGTAAAACCCAGCAGTGTTGTCCTATCTGACAAGGCCAGGCCCATCTaGCCATCCCACAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: NGVYYYLDVKPSSVVLSDKARPI*PSHREM
Trigger: CATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT...GTCAGATAGGACAACACTGCTGGGTTTTACATCCAGATAGTAATAAACACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR CCA 90 bp AATGGTGTTTATTACTATCTGGATGTAAAACCCAGCAGTGTTGTCCTATCTGACGGTCCCTGGTCACCATaGCAACCAATGGCCAATGCC +
Preference number: 2 (lower is better)
Translates to: NGVYYYLDVKPSSVVLSDGPWSP*QPMANA
Trigger: GGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC...GTCAGATAGGACAACACTGCTGGGTTTTACATCCAGATAGTAATAAACACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR-3UTR GCA 90 bp AATGGTGTTTATTACTATCTGGATGTAAAACCCAGCAGTGTTGTCCTATCTGACGCAACCAATGGCCAATaGCTTTCTCAAGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: NGVYYYLDVKPSSVVLSDATNGQ*LSQGQA
Trigger: GGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGC...GTCAGATAGGACAACACTGCTGGGTTTTACATCCAGATAGTAATAAACACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
3UTR GCA 72 bp AGCCACAACTCCCAGTGGCCTAGAAAGCTAAGGCCATaGACCAGGGCAGGACAGCACAGAGGCCTCACTCGG +
Preference number: 3 (lower is better)
Translates to: SHNSQWPRKLRP*TRAGQHRGLTR
Trigger: CCGAGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCACTGGGAGTTGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR CCA 72 bp AGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTaGAAGATGGGAAGCCCAGCCACAACTCCCAGTGGC +
Preference number: 3 (lower is better)
Translates to: RPICPSHREMSL*KMGSPATTPSG
Trigger: GCCACTGGGAGTTGTGGCTGGGCTTCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR TCA 72 bp TGCCCATCTCTAGGGCTTGAGCCTGGGCCAGAGATCTaGAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAA +
Preference number: 3 (lower is better)
Translates to: CPSLGLEPGPEI*RRFRVRVLHPE
Trigger: TTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAGGCTCAAGCCCTAGAGATGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR GCA 72 bp CCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTaGCCATCCCACAGGGAGATGTCTCTGTGGAAGATG +
Preference number: 3 (lower is better)
Translates to: PMANAFLKARPI*PSHREMSLWKM
Trigger: CATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR CCA 72 bp CGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTaGTCACCATGGCAACCAATGGCCAATGCCTTTCTC +
Preference number: 3 (lower is better)
Translates to: RSLSIHRQQRGP*SPWQPMANAFL
Trigger: GAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR CCA 72 bp CCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTaGTCCCTGGTCACCATGGCAACCAATGGCCAATGC +
Preference number: 3 (lower is better)
Translates to: PYSLTQHSQAAT*SLVTMATNGQC
Trigger: GCATTGGCCATTGGTTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
3UTR TCA 72 bp CTTCAACAGAGAGGGGCTTTCCTGCCTGAGATCTGGTaGGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTT +
Preference number: 3 (lower is better)
Translates to: LQQRGAFLPEIW*ADGCRESMLAF
Trigger: AAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCTCTCTGTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp AGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCCCCAGAAGCCTGCCAGTaGTGGTCTACCTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RAGLHREAGRPDPAASGPPEACQ*WSTSCR
Trigger: CCGGCAGGAGGTAGACCATCACTGGCAGGCTTCTGG...GGGCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp AGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCCACACCCATGGTGCTCTaGCATGGACAGGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RAGLHREAGRPDPAASGPTPMVL*HGQAWG
Trigger: CCCCCAGGCCTGTCCATGTCAGAGCACCATGGGTGT...GGGCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS-3UTR GCA 90 bp AGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCCAGGAAAGGCCCTCTCTaGCCTACTCAGGCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: RAGLHREAGRPDPAASGPRKGPL*PTQAQA
Trigger: GGCTTGGGCCTGAGTAGGGCAGAGAGGGCCTTTCCT...GGGCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCCGGCCCAGCACCTGCTTaGACAACTGGTAGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: RAGLHREAGRPDPAASGPGPAPA*TTGSRR
Trigger: CCGACGACTACCAGTTGTCCAAGCAGGTGCTGGGCC...GGGCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp GCAGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCCTGGGCCAGAGATCTaGAGGAGGTTTAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AGLDCTGRQADRIQQPQGPGPEI*RRFRVR
Trigger: CCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAGG...GCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp AGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCCGTAGTCGTCGGTCACTaGGTACTTCTTGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RAGLHREAGRPDPAASGPVVVGH*VLLGLP
Trigger: CGGGAGCCCAAGAAGTACGCAGTGACCGACGACTAC...GGGCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCCAGGATGCAGACAATATaGGGGCCGCCAGAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RAGLHREAGRPDPAASGPRMQTI*GPPEAC
Trigger: GCAGGCTTCTGGCGGCCCCCATATTGTCTGCATCCT...GGGCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GCAGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCTAAGGCTACCATGGTaGGGTGGGGCTGGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: AGLDCTGRQADRIQQPQGLRLPW*GGAGKL
Trigger: GAGCTTACCAGCCCCACCCCACCATGGTAGCCTTAG...GCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CCCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGGCGGTCGCGGGAGCTaGCGGCCGCAGAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: PQGRGEPSIAPPPLLAHSGGRGS*RPQKSQ
Trigger: CTGGGATTTCTGCGGCCGCCAGCTCCCGCGACCGCC...TGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621469.5
CDS-3UTR CCA 90 bp GGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCCTTCAGCGTCGCGATTaGTCAGCTCGCGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GVGLVSSDQPGKALSALLLQRRD*SARGAP
Trigger: CGGGGCCCCGCGAGCTGACCAATCGCGACGCTGAAG...GAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS-3UTR TCA 90 bp CCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCTCAGGGGAGAGCGCTaGGTGCCATCTGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PKAEVNPQSPLLPYSLTQLRGER*VPSGLG
Trigger: CCCCAGCCCAGATGGCACTCAGCGCTCTCCCCTGAG...CTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp GCAGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCAGGACCAGACATTCTaGGCATGGCTCAGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: AGLDCTGRQADRIQQPQGQDQTF*AWLSRL
Trigger: AAGGCGACTGAGCCATGCTCAGAATGTCTGGTCCTG...GCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCAGGCCCAAGCCAGGACCAGACGACCCTGGGCCCTCCTaGCCAGGGCCTGAGCACATT +
Preference number: 4 (lower is better)
Translates to: DQPGKALSALLRPKPGPDDPGPS*PGPEHI
Trigger: AATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTC...GTCTGGTCCTGGCTTGGGCCTGAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCGCGCTGAGTGCCATCTaGGCTGGGGCTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GVGLVSSDQPGKALSALLALSAI*AGAAAR
Trigger: CCTTGCTGCAGCCCCAGCCCAGATGGCACTCAGCGC...GAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp CCCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCACTAGTGGCACCTTGCTaGGGTACCGGCGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PQGRGEPSIAPPPLLAHSLVAPC*GTGEGQ
Trigger: CTGCCCCTCGCCGGTACCTCAGCAAGGTGCCACTAG...TGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357955.6
CDS-3UTR TCA 90 bp GATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCAGGCCCAAGCCAGGACCAGACTCCCCAAGGCAGAGGTaGACCCTCAATCGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: DQPGKALSALLRPKPGPDSPRQR*TLNRPS
Trigger: GGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGGA...GTCTGGTCCTGGCTTGGGCCTGAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp GGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCGGCAACGCACCTTGCTaGGGTACCGGCGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GHHGNQWPMPFSRPGPSAGNAPC*GTGEGQ
Trigger: CTGCCCCTCGCCGGTACCTCAGCAAGGTGCGTTGCC...GGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621469.5
CDS-3UTR GCA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGAGGGGAGAGCGCTGAGTaGCATCTGGGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KARPICPSHREMSLWKMGGESAE*HLGWGC
Trigger: GCAGCCCCAGCCCAGATGGCACTCAGCGCTCTCCCC...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGGACCCTGGGCCCTCCTaGCCAGGGCCTGAGCACATT +
Preference number: 4 (lower is better)
Translates to: PKAEVNPQSPLLPYSLTQDPGPS*PGPEHI
Trigger: AATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTC...CTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCCCAGAAGCCTGCCAGTaGTGGTCTACCTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GPWSPWQPMANAFLKARPPEACQ*WSTSCR
Trigger: CCGGCAGGAGGTAGACCATCACTGGCAGGCTTCTGG...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp GCAGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCAGGTCTTCAGGTCCTTaGTCTTCACCTGGTCGTAGT +
Preference number: 4 (lower is better)
Translates to: AGLDCTGRQADRIQQPQGRSSGP*SSPGRS
Trigger: ACTACGACCAGGTGAAGATCAAGGACCTGAAGACCT...GCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp CCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGTCCCCAAGGCAGAGGTaGACCCTCAATCGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PKAEVNPQSPLLPYSLTQSPRQR*TLNRPS
Trigger: GGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGGA...CTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR GCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCGGGGAGAGCGCTGAGTaGCATCTGGGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WSPWQPMANAFLKARPICGESAE*HLGWGC
Trigger: GCAGCCCCAGCCCAGATGGCACTCAGCGCTCTCCCC...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATGGGGAGAGCGCTGAGTaGCATCTGGGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHGESAE*HLGWGC
Trigger: GCAGCCCCAGCCCAGATGGCACTCAGCGCTCTCCCC...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp CCTGACTTCAACAGAGAGGGGCTTTCCTGCCTGAGATCTGGTGAGCAGATGGGTCCCGGGTCCACGCGCTaGTATTGGCCCTCCCCGACC +
Preference number: 4 (lower is better)
Translates to: PDFNREGLSCLRSGEQMGPGSTR*YWPSPT
Trigger: GGTCGGGGAGGGCCAATAGCAGCGCGTGGACCCGGG...ACCCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCTCTCTGTTGAAGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS-3UTR CCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCAGCACTCGGGCCGTGTaGAGTGGGGTCTGTGGCACT +
Preference number: 4 (lower is better)
Translates to: GPWSPWQPMANAFLKARPSTRAV*SGVCGT
Trigger: AGTGCCACAGACCCCACTCCACACGGCCCGAGTGCT...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GCAGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCACCATGGCAACCAATaGCCAATGCCTTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: AGLDCTGRQADRIQQPQGHHGNQ*PMPFSR
Trigger: CCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTG...GCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGAGCGCTGAGTGCCATCTaGGCTGGGGCTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: KARPICPSHREMSLWKMGALSAI*AGAAAR
Trigger: CCTTGCTGCAGCCCCAGCCCAGATGGCACTCAGCGC...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp TACCATGGTGGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTCCAGAAGCCTGCCAGTaGTGGTCTACCTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: YHGGVGLVSSDQPGKALSPEACQ*WSTSCR
Trigger: CCGGCAGGAGGTAGACCATCACTGGCAGGCTTCTGG...AGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCCACCATGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp GGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCCAGCTTCTCTCTCAGTaGAAGCCTGGTCGCCACGCT +
Preference number: 4 (lower is better)
Translates to: GVGLVSSDQPGKALSALLQLLSQ*KPGRHA
Trigger: AGCGTGGCGACCAGGCTTTCACTGAGAGAGAAGCTG...GAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp GGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCTCCTCCAAGGCCCCATaGGCTACTGGTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GVGLVSSDQPGKALSALLSSKAP*ATGCCS
Trigger: GCTGCAACAACCAGTAGCTCATGGGGCCTTGGAGGA...GAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCTCCCCAAGGCAGAGGTaGACCCTCAATCGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPSPRQR*TLNRPS
Trigger: GGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGGA...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp CCCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGGGCCAGCCAGTGTGTaGGAAATCAGCCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PQGRGEPSIAPPPLLAHSGPASV*EISLPK
Trigger: CTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCC...TGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp CCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGGGGGCTGGTAAGCTCTaGTCAGCCAGGAAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PKAEVNPQSPLLPYSLTQGAGKL*SARKGP
Trigger: AGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCC...CTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCGGGTTTCCCAGCCAGTaGGAGAGGGGCCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPGFPSQ*ERGQEG
Trigger: TCCTTCCTGGCCCCTCTCTCACTGGCTGGGAAACCC...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCAGGAAAGGCCCTCTCTaGCCTACTCAGGCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGRKGPL*PTQAQA
Trigger: GGCTTGGGCCTGAGTAGGGCAGAGAGGGCCTTTCCT...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAACTGTTTCACCATCCATaGCCCCCGCGGGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQLFHHP*PPRGAQ
Trigger: CTGAGCGCCCCGCGGGGGCCATGGATGGTGAAACAG...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCCCTCCTGCCGGGCCTTaGGGCTGTCATACAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPPPAGP*GCHTGA
Trigger: AGCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGG...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp ATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCTCATCCCCGGGGAGATaGCCTGGCCCGTGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: IAPPPLLAHSAFTGSNVVSSPGR*PGPCWS
Trigger: ACTCCAACACGGGCCAGGCCATCTCCCCGGGGATGA...GACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGATCATCCCCGGGGAGATaGCCTGGCCCGTGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: KARPICPSHREMSLWKMGSSPGR*PGPCWS
Trigger: ACTCCAACACGGGCCAGGCCATCTCCCCGGGGATGA...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCTTGGGGAAGCCGTACTaGCCCAGGCGAATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GPWSPWQPMANAFLKARPLGKPY*PRRILL
Trigger: GAGGAGGATTCGCCTGGGCCAGTACGGCTTCCCCAA...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCTTGGGGAAGCCGTACTaGCCCAGGCGAATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGLGKPY*PRRILL
Trigger: GAGGAGGATTCGCCTGGGCCAGTACGGCTTCCCCAA...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCTCGGGCCGTGTGGAGTaGGGTCTGTGGCACTACCAT +
Preference number: 4 (lower is better)
Translates to: GPWSPWQPMANAFLKARPSGRVE*GLWHYH
Trigger: ATGGTAGTGCCACAGACCCCACTCCACACGGCCCGA...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATGACCCTGGGCCCTCCTaGCCAGGGCCTGAGCACATT +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHDPGPS*PGPEHI
Trigger: AATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTC...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp TCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCAGAGTGCCATCTGGGCTaGGGCTGCAGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSLTRSLSIHRQQRGPWSECHLG*GCSKAG
Trigger: CCCTGCCTTGCTGCAGCCCCAGCCCAGATGGCACTC...TGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CCCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGGAATAGTGAGGGGATaGCTAGGCCCAGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: PQGRGEPSIAPPPLLAHSGIVRG*LGPGTP
Trigger: GGGAGTCCCTGGGCCTAGCCATCCCCTCACTATTCC...TGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAAAGAATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTTCCACGCGCTGCTATTaGCCCTCCCCGACCGCTCGG +
Preference number: 4 (lower is better)
Translates to: KRMTLGPPGQGLSTFQSVSTRCY*PSPTAR
Trigger: CCGAGCGGTCGGGGAGGGCCAATAGCAGCGCGTGGA...AACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCATTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS-3UTR TCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTCCCCAAGGCAGAGGTaGACCCTCAATCGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHSPRQR*TLNRPS
Trigger: GGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGGA...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp TCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGGGCCAGCCAGTGTGTaGGAAATCAGCCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: SRPGPSAHPTGRCLCGRWGPASV*EISLPK
Trigger: CTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCC...CCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCGGGCCAGCCAGTGTGTaGGAAATCAGCCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPGPASV*EISLPK
Trigger: CTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCC...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR GCA 90 bp CCCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGTAGTCGTCGGTCACTaGGTACTTCTTGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PQGRGEPSIAPPPLLAHSVVVGH*VLLGLP
Trigger: CGGGAGCCCAAGAAGTACGCAGTGACCGACGACTAC...TGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp GGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCTGGTCTTTGTCCTCCTaGAGCACTCGGGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: GHHGNQWPMPFSRPGPSAWSLSS*STRAVW
Trigger: CCACACGGCCCGAGTGCTGCAGGAGGACAAAGACCA...GGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp GATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCAGGCCCAAGCCAGGACCAGACAGAAAGCTAAGGCCATaGACCAGGGCAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: DQPGKALSALLRPKPGPDRKLRP*TRAGQH
Trigger: GTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCT...GTCTGGTCCTGGCTTGGGCCTGAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp TGGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGAGGCCTCACTAAGGCCAGGCCCATCTaGCCATCCCACAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: WPRKLRPCTRAGQHRGLTKARPI*PSHREM
Trigger: CATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT...AGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp AAAAGAATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTCTGTTTCACCATCCATaGCCCCCGCGGGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: KRMTLGPPGQGLSTFQSVLFHHP*PPRGAQ
Trigger: CTGAGCGCCCCGCGGGGGCCATGGATGGTGAAACAG...AACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCATTCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCTGTCCAGTGCGCCGATaGAAGCACTCCAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: GVGLVSSDQPGKALSALLCPVRR*KHSSTL
Trigger: CAAAGTGCTGGAGTGCTTCCATCGGCGCACTGGACA...GAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCTCCTGCCGGGCCTTaGGGCTGTCATACAGGAGCT +
Preference number: 4 (lower is better)
Translates to: WSPWQPMANAFLKARPICPPAGP*GCHTGA
Trigger: AGCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGG...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCTCATCCCCGGGGAGATaGCCTGGCCCGTGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: WSPWQPMANAFLKARPICSSPGR*PGPCWS
Trigger: ACTCCAACACGGGCCAGGCCATCTCCCCGGGGATGA...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGATCGGGCCGTGTGGAGTaGGGTCTGTGGCACTACCAT +
Preference number: 4 (lower is better)
Translates to: KARPICPSHREMSLWKMGSGRVE*GLWHYH
Trigger: ATGGTAGTGCCACAGACCCCACTCCACACGGCCCGA...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCGGTCCCTGGTCACCATaGCAACCAATGGCCAATGCC +
Preference number: 4 (lower is better)
Translates to: GPWSPWQPMANAFLKARPGPWSP*QPMANA
Trigger: GGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp CCCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGGTCCCTGGTCACCATaGCAACCAATGGCCAATGCC +
Preference number: 4 (lower is better)
Translates to: PQGRGEPSIAPPPLLAHSGPWSP*QPMANA
Trigger: GGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC...TGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCTCACAGGCAGCAACGTaGTCCCTGGTCACCATGGCA +
Preference number: 4 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGSQAAT*SLVTMA
Trigger: TGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGA...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp CTGGGCCAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCGAGTGCCATCTGGGCTaGGGCTGCAGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LGQRSEGGLGSGSSILKFECHLG*GCSKAG
Trigger: CCCTGCCTTGCTGCAGCCCCAGCCCAGATGGCACTC...GAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp TCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGGAATAGTGAGGGGATaGCTAGGCCCAGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: SRPGPSAHPTGRCLCGRWGIVRG*LGPGTP
Trigger: GGGAGTCCCTGGGCCTAGCCATCCCCTCACTATTCC...CCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCGCTTCTAGTGGCACCTaGCGGCAACGCACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPASSGT*RQRTLL
Trigger: CAGCAAGGTGCGTTGCCGCCAGGTGCCACTAGAAGC...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTACTCCCTGCCCCTCTaGGTAGCTTCAGCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHYSLPL*VASAPG
Trigger: ACCCGGGGCTGAAGCTACCCAGAGGGGCAGGGAGTA...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS-3UTR TCA 90 bp ATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTATGCAGCAGCTTCTCTCTCAGTaGAAGCCTGGTCGCCACGCT +
Preference number: 4 (lower is better)
Translates to: MTLGPPGQGLSTFQSVMQQLLSQ*KPGRHA
Trigger: AGCGTGGCGACCAGGCTTTCACTGAGAGAGAAGCTG...CTGCATAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp TGGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGAGGCCTCACTGTCTGTTATGCAGGCTaGGAGGCCAGGCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: WPRKLRPCTRAGQHRGLTVCYAG*EARLLQ
Trigger: TTGGAGGAGCCTGGCCTCTCAGCCTGCATAACAGAC...AGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp ATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTATGCAGGTCTGTTATGCAGGCTaGGAGGCCAGGCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: MTLGPPGQGLSTFQSVMQVCYAG*EARLLQ
Trigger: TTGGAGGAGCCTGGCCTCTCAGCCTGCATAACAGAC...CTGCATAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCCTCCTGGCCAGGGCCTaGGCACATTTCAGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: GPWSPWQPMANAFLKARPLLARA*AHFSLL
Trigger: TAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAG...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp GGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCCTTTTGTTAAAAGAATaGCCCTGGGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GVGLVSSDQPGKALSALLLLLKE*PWALLA
Trigger: GGCCAGGAGGGCCCAGGGTCATTCTTTTAACAAAAG...GAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp TACCATGGTGGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTCCTGGGCCAGAGATCTaGAGGAGGTTTAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: YHGGVGLVSSDQPGKALSPGPEI*RRFRVR
Trigger: CCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAGG...AGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCCACCATGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp AACCCAGCAGTGTTGTCCTATCTGACATGGTCTAGGGTTTCCCAGCCAGTGAGACTCAGGGGAGAGCGCTaGGTGCCATCTGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NPAVLSYLTWSRVSQPVRLRGER*VPSGLG
Trigger: CCCCAGCCCAGATGGCACTCAGCGCTCTCCCCTGAG...TCTCACTGGCTGGGAAACCCTAGACCATGTCAGATAGGACAACACTGCTGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCCTGCCTGAGATCTGGTaGGCAGATGGGTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPLPEIW*ADGCRE
Trigger: TTCCCTGCACCCATCTGCTCACCAGATCTCAGGCAG...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCAGGGGCTTTCCTGCCTaGGATCTGGTGAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPRGFPA*DLVSRW
Trigger: CCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCT...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp ATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTATGCAGAGGGGCTTTCCTGCCTaGGATCTGGTGAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: MTLGPPGQGLSTFQSVMQRGFPA*DLVSRW
Trigger: CCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCT...CTGCATAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp TACCATGGTGGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTAGGGGCTTTCCTGCCTaGGATCTGGTGAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: YHGGVGLVSSDQPGKALSRGFPA*DLVSRW
Trigger: CCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCT...AGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCCACCATGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAAGGGGCTGGTAAGCTCTaGTCAGCCAGGAAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQGAGKL*SARKGP
Trigger: AGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCC...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCGGGGCTGGTAAGCTCTaGTCAGCCAGGAAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: WSPWQPMANAFLKARPICGAGKL*SARKGP
Trigger: AGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCC...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp CTGGGCCAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCGGGTTTCCCAGCCAGTaGGAGAGGGGCCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LGQRSEGGLGSGSSILKFGFPSQ*ERGQEG
Trigger: TCCTTCCTGGCCCCTCTCTCACTGGCTGGGAAACCC...GAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp ATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTATGCAGGTAGTCGTCGGTCACTaGGTACTTCTTGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: MTLGPPGQGLSTFQSVMQVVVGH*VLLGLP
Trigger: CGGGAGCCCAAGAAGTACGCAGTGACCGACGACTAC...CTGCATAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp ATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCAGCACTCCAGCACTTTaGCGTTCACACCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: IAPPPLLAHSAFTGSNVVSTPAL*RSHPGP
Trigger: TGGGCCTGGGTGTGAACGGCAAAGTGCTGGAGTGCT...GACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCTGGTCTTTGTCCTCCTaGAGCACTCGGGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: WSPWQPMANAFLKARPICWSLSS*STRAVW
Trigger: CCACACGGCCCGAGTGCTGCAGGAGGACAAAGACCA...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCAGAAAGCTAAGGCCATaGACCAGGGCAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGRKLRP*TRAGQH
Trigger: GTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCT...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR GCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAAAAGGCCAGGCCCATCTaGCCATCCCACAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQKARPI*PSHREM
Trigger: CATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR GCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCAAGGCCAGGCCCATCTaGCCATCCCACAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: WSPWQPMANAFLKARPICKARPI*PSHREM
Trigger: CATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR GCA 90 bp TCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCAAAGGCCAGGCCCATCTaGCCATCCCACAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SSLTRSLSIHRQQRGPWSKARPI*PSHREM
Trigger: CATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT...TGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGAGGCCTCACTAGGATGCAGACAATATaGGGGCCGCCAGAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: WPRKLRPCTRAGQHRGLTRMQTI*GPPEAC
Trigger: GCAGGCTTCTGGCGGCCCCCATATTGTCTGCATCCT...AGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AGGAGTGAGAATGAGAGGGCCAGCCAGTGTGTGAGAAATCAGCCTCCCCAAGGCTTGGGGAAGCCGTACTaGCCCAGGCGAATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RSENERASQCVRNQPPQGLGKPY*PRRILL
Trigger: GAGGAGGATTCGCCTGGGCCAGTACGGCTTCCCCAA...GCCTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCCTCTCATTCTCACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCCTGACCACTCAGGATTaGGGAAGCCGTACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPLTTQD*GSRTGP
Trigger: TGGGCCAGTACGGCTTCCCCAATCCTGAGTGGTCAG...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp TCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGCTGACCACTCAGGATTaGGGAAGCCGTACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SRPGPSAHPTGRCLCGRWLTTQD*GSRTGP
Trigger: TGGGCCAGTACGGCTTCCCCAATCCTGAGTGGTCAG...CCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTCGGGCCGTGTGGAGTaGGGTCTGTGGCACTACCAT +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHSGRVE*GLWHYH
Trigger: ATGGTAGTGCCACAGACCCCACTCCACACGGCCCGA...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp TCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGGCCCCATGAGCTACTaGTTGTTGCAGCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SRPGPSAHPTGRCLCGRWGPMSY*LLQPCE
Trigger: CTCACAGGGCTGCAACAACCAGTAGCTCATGGGGCC...CCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCAGGGAGATGTCTCTGTaGAAGATGGGAAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGREMSL*KMGSPA
Trigger: GGCTGGGCTTCCCATCTTCCACAGAGACATCTCCCT...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp TACCATGGTGGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGGTCCCTGGTCACCATaGCAACCAATGGCCAATGCC +
Preference number: 4 (lower is better)
Translates to: YHGGVGLVSSDQPGKALSGPWSP*QPMANA
Trigger: GGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC...AGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCCACCATGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCCGAGTGGAGTGCCATCTGGGCTaGGGCTGCAGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QRSEGGLGSGSSILKFRVECHLG*GCSKAG
Trigger: CCCTGCCTTGCTGCAGCCCCAGCCCAGATGGCACTC...CACTCGGAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAAGGAATAGTGAGGGGATaGCTAGGCCCAGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQGIVRG*LGPGTP
Trigger: GGGAGTCCCTGGGCCTAGCCATCCCCTCACTATTCC...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp TCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGACCCTAAGGCTACCATaGTGGGGTGGGGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: SRPGPSAHPTGRCLCGRWTLRLP*WGGAGK
Trigger: CTTACCAGCCCCACCCCACCATGGTAGCCTTAGGGT...CCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp CCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGGCTCCTGAATCCTGCTaGACAACTCACCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: PKAEVNPQSPLLPYSLTQAPESC*TTHHLP
Trigger: TGGAAGGTGGTGAGTTGTTCAGCAGGATTCAGGAGC...CTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCTGGTCATCTCCTCCTTaGCTTCGTCCCAGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGWSSPP*LRPSGL
Trigger: AAGACCACTGGGACGAAGTCAAGGAGGAGATGACCA...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp TGGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGAGGCCTCACTCTCCTGGCCAGGGCCTaGGCACATTTCAGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: WPRKLRPCTRAGQHRGLTLLARA*AHFSLL
Trigger: TAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAG...AGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp CTGGGCCAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCGGGCCAGCCAGTGTGTaGGAAATCAGCCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LGQRSEGGLGSGSSILKFGPASV*EISLPK
Trigger: CTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCC...GAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGACAGGACCAGACATTCTaGGCATGGCTCAGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: KARPICPSHREMSLWKMGQDQTF*AWLSRL
Trigger: AAGGCGACTGAGCCATGCTCAGAATGTCTGGTCCTG...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGACACACTTCTGTCCAGTaGGCCGATGGAAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: KARPICPSHREMSLWKMGHTSVQ*ADGSTP
Trigger: TGGAGTGCTTCCATCGGCGCACTGGACAGAAGTGTG...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp GATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCAGGCCCAAGCCAGGACCAGACCAGCGCTTGCCATGGTaGATGTTCTCATACACATCC +
Preference number: 4 (lower is better)
Translates to: DQPGKALSALLRPKPGPDQRLPW*MFSYTS
Trigger: GGATGTGTATGAGAACATGCACCATGGCAAGCGCTG...GTCTGGTCCTGGCTTGGGCCTGAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp TGGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGAGGCCTCACTAGAAAGCTAAGGCCATaGACCAGGGCAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: WPRKLRPCTRAGQHRGLTRKLRP*TRAGQH
Trigger: GTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCT...AGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR GCA 90 bp TCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGAGAAAGCTAAGGCCATaGACCAGGGCAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: SRPGPSAHPTGRCLCGRWRKLRP*TRAGQH
Trigger: GTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCT...CCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR GCA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCGCAACCAATGGCCAATaGCTTTCTCAAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPATNGQ*LSQGQA
Trigger: GGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGC...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR GCA 90 bp GGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCGCAACCAATGGCCAATaGCTTTCTCAAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GHHGNQWPMPFSRPGPSAATNGQ*LSQGQA
Trigger: GGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGC...GGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGCTGTTTCACCATCCATaGCCCCCGCGGGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQLFHHP*PPRGAQ
Trigger: CTGAGCGCCCCGCGGGGGCCATGGATGGTGAAACAG...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGATGTCCAGTGCGCCGATaGAAGCACTCCAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: KARPICPSHREMSLWKMGCPVRR*KHSSTL
Trigger: CAAAGTGCTGGAGTGCTTCCATCGGCGCACTGGACA...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCTGTGCAGAAACTGGATaGCAGTGCCAATATCCCGCA +
Preference number: 4 (lower is better)
Translates to: GVGLVSSDQPGKALSALLCAETG*QCQYPA
Trigger: TGCGGGATATTGGCACTGCCATCCAGTTTCTGCACA...GAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCAGGCCCAAGCCAGGACCAGACTGGCTGTGCAGAAACTaGATGGCAGTGCCAATATCC +
Preference number: 4 (lower is better)
Translates to: DQPGKALSALLRPKPGPDWLCRN*MAVPIS
Trigger: GGATATTGGCACTGCCATCCAGTTTCTGCACAGCCA...GTCTGGTCCTGGCTTGGGCCTGAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCGGCTTGACATCTCGGTaGGCAATGTTATGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGGLTSR*AMLWLC
Trigger: GCACAGCCATAACATTGCCCACCGAGATGTCAAGCC...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCGTCTGCAGGGCATTTTaGGTGGTCTCCTTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GVGLVSSDQPGKALSALLVCRAF*VVSLAK
Trigger: CTTTGCTAAGGAGACCACCCAAAATGCCCTGCAGAC...GAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATCTGACCACTCAGGATTaGGGAAGCCGTACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHLTTQD*GSRTGP
Trigger: TGGGCCAGTACGGCTTCCCCAATCCTGAGTGGTCAG...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGAGGCGGATCAGCTGCTTaGCATCCTCAGAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: KARPICPSHREMSLWKMGGGSAA*HPQRLL
Trigger: CAGAAGTCTCTGAGGATGCCAAGCAGCTGATCCGCC...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCTGGTCAGCCTCTCTGTaGGGTCTGTCTTCAACAGGA +
Preference number: 4 (lower is better)
Translates to: GPWSPWQPMANAFLKARPWSASL*GLSSTG
Trigger: TCCTGTTGAAGACAGACCCCACAGAGAGGCTGACCA...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCTGGTCAGCCTCTCTGTaGGGTCTGTCTTCAACAGGA +
Preference number: 4 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGWSASL*GLSSTG
Trigger: TCCTGTTGAAGACAGACCCCACAGAGAGGCTGACCA...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp CAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCCGAGTGAGCACTCGGGCCGTGTaGAGTGGGGTCTGTGGCACT +
Preference number: 4 (lower is better)
Translates to: QRSEGGLGSGSSILKFRVSTRAV*SGVCGT
Trigger: AGTGCCACAGACCCCACTCCACACGGCCCGAGTGCT...CACTCGGAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATGGCCCCATGAGCTACTaGTTGTTGCAGCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHGPMSY*LLQPCE
Trigger: CTCACAGGGCTGCAACAACCAGTAGCTCATGGGGCC...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp GGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCAGGGAGATGTCTCTGTaGAAGATGGGAAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GHHGNQWPMPFSRPGPSAREMSL*KMGSPA
Trigger: GGCTGGGCTTCCCATCTTCCACAGAGACATCTCCCT...GGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp GGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCCACCATGGCAACCAATaGCCAATGCCTTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GVGLVSSDQPGKALSALLHHGNQ*PMPFSR
Trigger: CCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTG...GAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AGGAGTGAGAATGAGAGGGCCAGCCAGTGTGTGAGAAATCAGCCTCCCCAAGGCGGTCCCTGGTCACCATaGCAACCAATGGCCAATGCC +
Preference number: 4 (lower is better)
Translates to: RSENERASQCVRNQPPQGGPWSP*QPMANA
Trigger: GGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC...GCCTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCCTCTCATTCTCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAATCACAGGCAGCAACGTaGTCCCTGGTCACCATGGCA +
Preference number: 4 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQSQAAT*SLVTMA
Trigger: TGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGA...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp AGGAGTGAGAATGAGAGGGCCAGCCAGTGTGTGAGAAATCAGCCTCCCCAAGGCCTAAGGCTACCATGGTaGGGTGGGGCTGGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: RSENERASQCVRNQPPQGLRLPW*GGAGKL
Trigger: GAGCTTACCAGCCCCACCCCACCATGGTAGCCTTAG...GCCTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCCTCTCATTCTCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATACCCTAAGGCTACCATaGTGGGGTGGGGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHTLRLP*WGGAGK
Trigger: CTTACCAGCCCCACCCCACCATGGTAGCCTTAGGGT...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp CCCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAATCCTCAGAGACTTCTaGCCACTCAGGATTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PQGRGEPSIAPPPLLAHSILRDF*PLRIGE
Trigger: TTCCCCAATCCTGAGTGGTCAGAAGTCTCTGAGGAT...TGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp CCTGACTTCAACAGAGAGGGGCTTTCCTGCCTGAGATCTGGTGAGCAGATGGGTGTCTGTTATGCAGGCTaGGAGGCCAGGCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PDFNREGLSCLRSGEQMGVCYAG*EARLLQ
Trigger: TTGGAGGAGCCTGGCCTCTCAGCCTGCATAACAGAC...ACCCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCTCTCTGTTGAAGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGACTTTTGTTAAAAGAATaGCCCTGGGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KARPICPSHREMSLWKMGLLLKE*PWALLA
Trigger: GGCCAGGAGGGCCCAGGGTCATTCTTTTAACAAAAG...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp AAAAGAATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTCTGCCTGAGATCTGGTaGGCAGATGGGTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: KRMTLGPPGQGLSTFQSVLPEIW*ADGCRE
Trigger: TTCCCTGCACCCATCTGCTCACCAGATCTCAGGCAG...AACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCATTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAACAGGACCAGACATTCTaGGCATGGCTCAGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQQDQTF*AWLSRL
Trigger: AAGGCGACTGAGCCATGCTCAGAATGTCTGGTCCTG...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp CTGGGCCAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCAGCACTCCAGCACTTTaGCGTTCACACCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGQRSEGGLGSGSSILKFSTPAL*RSHPGP
Trigger: TGGGCCTGGGTGTGAACGGCAAAGTGCTGGAGTGCT...GAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATCACACTTCTGTCCAGTaGGCCGATGGAAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHHTSVQ*ADGSTP
Trigger: TGGAGTGCTTCCATCGGCGCACTGGACAGAAGTGTG...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp TCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACACACTTCTGTCCAGTaGGCCGATGGAAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SSLTRSLSIHRQQRGPWSHTSVQ*ADGSTP
Trigger: TGGAGTGCTTCCATCGGCGCACTGGACAGAAGTGTG...TGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp TACCATGGTGGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTCATACACATCCAGGATaGAGACAATATGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: YHGGVGLVSSDQPGKALSHTHPG*RQYGGR
Trigger: GCGGCCCCCATATTGTCTGCATCCTGGATGTGTATG...AGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCCACCATGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp TGGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGAGGCCTCACTCATACACATCCAGGATaGAGACAATATGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: WPRKLRPCTRAGQHRGLTHTHPG*RQYGGR
Trigger: GCGGCCCCCATATTGTCTGCATCCTGGATGTGTATG...AGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCCAGCGCTTGCCATGGTaGATGTTCTCATACACATCC +
Preference number: 4 (lower is better)
Translates to: GPWSPWQPMANAFLKARPQRLPW*MFSYTS
Trigger: GGATGTGTATGAGAACATGCACCATGGCAAGCGCTG...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCGCAACCAATGGCCAATaGCTTTCTCAAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WSPWQPMANAFLKARPICATNGQ*LSQGQA
Trigger: GGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGC...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR GCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCAGTATTTCCTTTCACTaGTCAGGGCCCCAGACCCGG +
Preference number: 4 (lower is better)
Translates to: WSPWQPMANAFLKARPICSISFH*SGPQTR
Trigger: CCGGGTCTGGGGCCCTGAGCAGTGAAAGGAAATACT...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS-3UTR GCA 90 bp AGGAGTGAGAATGAGAGGGCCAGCCAGTGTGTGAGAAATCAGCCTCCCCAAGGCAAGGGACACCCATGGTaGTCTGACATGGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: RSENERASQCVRNQPPQGKGHPW*SDMDRP
Trigger: AGGCCTGTCCATGTCAGAGCACCATGGGTGTCCCTT...GCCTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCCTCTCATTCTCACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS-3UTR CCA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGCCTCCTGCCGGGCCTTaGGGCTGTCATACAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQPPAGP*GCHTGA
Trigger: AGCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGG...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAAAGAATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTAGGATGCAGACAATATaGGGGCCGCCAGAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KRMTLGPPGQGLSTFQSVRMQTI*GPPEAC
Trigger: GCAGGCTTCTGGCGGCCCCCATATTGTCTGCATCCT...AACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCATTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp TCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGGCTTGACATCTCGGTaGGCAATGTTATGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SRPGPSAHPTGRCLCGRWGLTSR*AMLWLC
Trigger: GCACAGCCATAACATTGCCCACCGAGATGTCAAGCC...CCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCCGAGTGTGGCCTGGCCCGTGTTaGAGTAGAAGGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: QRSEGGLGSGSSILKFRVWPGPC*SRRVGS
Trigger: GCTTCCCACCCTTCTACTCCAACACGGGCCAGGCCA...CACTCGGAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCGGCGGATCAGCTGCTTaGCATCCTCAGAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: WSPWQPMANAFLKARPICGGSAA*HPQRLL
Trigger: CAGAAGTCTCTGAGGATGCCAAGCAGCTGATCCGCC...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAAGGCGGATCAGCTGCTTaGCATCCTCAGAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQGGSAA*HPQRLL
Trigger: CAGAAGTCTCTGAGGATGCCAAGCAGCTGATCCGCC...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp ATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCTGGTCAGCCTCTCTGTaGGGTCTGTCTTCAACAGGA +
Preference number: 4 (lower is better)
Translates to: IAPPPLLAHSAFTGSNVVWSASL*GLSSTG
Trigger: TCCTGTTGAAGACAGACCCCACAGAGAGGCTGACCA...GACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp TACCATGGTGGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTGGCACTACCATCGATTaGTTGATCCAGGGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: YHGGVGLVSSDQPGKALSGTTID*LIQGWF
Trigger: GAACCACCCCTGGATCAACCAATCGATGGTAGTGCC...AGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCCACCATGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCGTGGAGTGGGGTCTGTaGCACTACCATCGATTGGTT +
Preference number: 4 (lower is better)
Translates to: GHHGNQWPMPFSRPGPSAVEWGL*HYHRLV
Trigger: AACCAATCGATGGTAGTGCCACAGACCCCACTCCAC...GGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGAGCACTCGGGCCGTGTaGAGTGGGGTCTGTGGCACT +
Preference number: 4 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQSTRAV*SGVCGT
Trigger: AGTGCCACAGACCCCACTCCACACGGCCCGAGTGCT...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGATTGACTTCGTCCCAGTaGTCTTTGTCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KARPICPSHREMSLWKMGLTSSQ*SLSSCS
Trigger: GCTGCAGGAGGACAAAGACCACTGGGACGAAGTCAA...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCAGCCACAACTCCCAGTaGCCTAGAAAGCTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPSHNSQ*PRKLRP
Trigger: TGGCCTTAGCTTTCTAGGCCACTGGGAGTTGTGGCT...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp GGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCAGCCACAACTCCCAGTaGCCTAGAAAGCTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GHHGNQWPMPFSRPGPSASHNSQ*PRKLRP
Trigger: TGGCCTTAGCTTTCTAGGCCACTGGGAGTTGTGGCT...GGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp ATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCAGCCACAACTCCCAGTaGCCTAGAAAGCTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: IAPPPLLAHSAFTGSNVVSHNSQ*PRKLRP
Trigger: TGGCCTTAGCTTTCTAGGCCACTGGGAGTTGTGGCT...GACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp TCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCAAGGGAGATGTCTCTGTaGAAGATGGGAAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SSLTRSLSIHRQQRGPWSREMSL*KMGSPA
Trigger: GGCTGGGCTTCCCATCTTCCACAGAGACATCTCCCT...TGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCTCAAAGGGACACCCATaGTGCTCTGACATGGACAGG +
Preference number: 4 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPSKGHP*CSDMDR
Trigger: CCTGTCCATGTCAGAGCACCATGGGTGTCCCTTTGA...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS-3UTR TCA 90 bp ATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTATGCAGATCCTCAGAGACTTCTaGCCACTCAGGATTGGGGAA +
Preference number: 4 (lower is better)
Translates to: MTLGPPGQGLSTFQSVMQILRDF*PLRIGE
Trigger: TTCCCCAATCCTGAGTGGTCAGAAGTCTCTGAGGAT...CTGCATAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp GGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCATCCTCAGAGACTTCTaGCCACTCAGGATTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GHHGNQWPMPFSRPGPSAILRDF*PLRIGE
Trigger: TTCCCCAATCCTGAGTGGTCAGAAGTCTCTGAGGAT...GGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGAATCCTCAGAGACTTCTaGCCACTCAGGATTGGGGAA +
Preference number: 4 (lower is better)
Translates to: KARPICPSHREMSLWKMGILRDF*PLRIGE
Trigger: TTCCCCAATCCTGAGTGGTCAGAAGTCTCTGAGGAT...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGAAGGTCTTCAGGTCCTTaGTCTTCACCTGGTCGTAGT +
Preference number: 4 (lower is better)
Translates to: KARPICPSHREMSLWKMGRSSGP*SSPGRS
Trigger: ACTACGACCAGGTGAAGATCAAGGACCTGAAGACCT...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp TGGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGAGGCCTCACTAGGTCTTCAGGTCCTTaGTCTTCACCTGGTCGTAGT +
Preference number: 4 (lower is better)
Translates to: WPRKLRPCTRAGQHRGLTRSSGP*SSPGRS
Trigger: ACTACGACCAGGTGAAGATCAAGGACCTGAAGACCT...AGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp CAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCCGAGTGTCCTCCAAGGCCCCATaGGCTACTGGTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QRSEGGLGSGSSILKFRVSSKAP*ATGCCS
Trigger: GCTGCAACAACCAGTAGCTCATGGGGCCTTGGAGGA...CACTCGGAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp TGGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGAGGCCTCACTCAGTGTTGTCCTATCTaGCATGGTCTAGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: WPRKLRPCTRAGQHRGLTQCCPI*HGLGFP
Trigger: GGGAAACCCTAGACCATGTCAGATAGGACAACACTG...AGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp ATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCAGCGCTTGCCATGGTaGATGTTCTCATACACATCC +
Preference number: 4 (lower is better)
Translates to: IAPPPLLAHSAFTGSNVVQRLPW*MFSYTS
Trigger: GGATGTGTATGAGAACATGCACCATGGCAAGCGCTG...GACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCGCAATGTTATGGCTGTaGAGAAACTGGATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GPWSPWQPMANAFLKARPAMLWL*RNWMAV
Trigger: CACTGCCATCCAGTTTCTGCACAGCCATAACATTGC...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp GATCAGCCAGGAAAGGCCCTCTCTGCCCTACTCAGGCCCAAGCCAGGACCAGACATTGTAACCTCTCCATaGCTCAGTTTTCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: DQPGKALSALLRPKPGPDIVTSP*LSFLTL
Trigger: CAGGGTGAGAAAACTGAGGCATGGAGAGGTTACAAT...GTCTGGTCCTGGCTTGGGCCTGAGTAGGGCAGAGAGGGCCTTTCCTGGCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS-3UTR CCA 90 bp AACCCAGCAGTGTTGTCCTATCTGACATGGTCTAGGGTTTCCCAGCCAGTGAGAGGCCCAGCACCTGCTTaGACAACTGGTAGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: NPAVLSYLTWSRVSQPVRGPAPA*TTGSRR
Trigger: CCGACGACTACCAGTTGTCCAAGCAGGTGCTGGGCC...TCTCACTGGCTGGGAAACCCTAGACCATGTCAGATAGGACAACACTGCTGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CCTGACTTCAACAGAGAGGGGCTTTCCTGCCTGAGATCTGGTGAGCAGATGGGTTGTCCAGTGCGCCGATaGAAGCACTCCAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: PDFNREGLSCLRSGEQMGCPVRR*KHSSTL
Trigger: CAAAGTGCTGGAGTGCTTCCATCGGCGCACTGGACA...ACCCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCTCTCTGTTGAAGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCAGACAGCGCTTGCCATaGTGCATGTTCTCATACACA +
Preference number: 4 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGRQRLP*CMFSYT
Trigger: TGTGTATGAGAACATGCACCATGGCAAGCGCTGTCT...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCTGTGCAGAAACTGGATaGCAGTGCCAATATCCCGCA +
Preference number: 4 (lower is better)
Translates to: GHHGNQWPMPFSRPGPSACAETG*QCQYPA
Trigger: TGCGGGATATTGGCACTGCCATCCAGTTTCTGCACA...GGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp TCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGTCTGCAGGGCATTTTaGGTGGTCTCCTTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SRPGPSAHPTGRCLCGRWVCRAF*VVSLAK
Trigger: CTTTGCTAAGGAGACCACCCAAAATGCCCTGCAGAC...CCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp ATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTATGCAGGTCTGCAGGGCATTTTaGGTGGTCTCCTTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: MTLGPPGQGLSTFQSVMQVCRAF*VVSLAK
Trigger: CTTTGCTAAGGAGACCACCCAAAATGCCCTGCAGAC...CTGCATAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCCGAGTGCTGACCACTCAGGATTaGGGAAGCCGTACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: QRSEGGLGSGSSILKFRVLTTQD*GSRTGP
Trigger: TGGGCCAGTACGGCTTCCCCAATCCTGAGTGGTCAG...CACTCGGAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp TCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCATGGTCAGCCTCTCTGTaGGGTCTGTCTTCAACAGGA +
Preference number: 4 (lower is better)
Translates to: SSLTRSLSIHRQQRGPWSWSASL*GLSSTG
Trigger: TCCTGTTGAAGACAGACCCCACAGAGAGGCTGACCA...TGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTTGACTTCGTCCCAGTaGTCTTTGTCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHLTSSQ*SLSSCS
Trigger: GCTGCAGGAGGACAAAGACCACTGGGACGAAGTCAA...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CTGGGCCAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCAGGGAGATGTCTCTGTaGAAGATGGGAAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGQRSEGGLGSGSSILKFREMSL*KMGSPA
Trigger: GGCTGGGCTTCCCATCTTCCACAGAGACATCTCCCT...GAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp TGGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGAGGCCTCACTCACCATGGCAACCAATaGCCAATGCCTTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: WPRKLRPCTRAGQHRGLTHHGNQ*PMPFSR
Trigger: CCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTG...AGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp CCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGTTGTCCTATCTGACATaGTCTAGGGTTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PKAEVNPQSPLLPYSLTQLSYLT*SRVSQP
Trigger: TGGCTGGGAAACCCTAGACCATGTCAGATAGGACAA...CTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCTTGTCCTATCTGACATaGTCTAGGGTTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGLSYLT*SRVSQP
Trigger: TGGCTGGGAAACCCTAGACCATGTCAGATAGGACAA...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAAAGGTCTTCAGGTCCTTaGTCTTCACCTGGTCGTAGT +
Preference number: 4 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQRSSGP*SSPGRS
Trigger: ACTACGACCAGGTGAAGATCAAGGACCTGAAGACCT...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp CAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCCGAGTGCTCCTGGCCAGGGCCTaGGCACATTTCAGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: QRSEGGLGSGSSILKFRVLLARA*AHFSLL
Trigger: TAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAG...CACTCGGAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR TCA 90 bp AACCCAGCAGTGTTGTCCTATCTGACATGGTCTAGGGTTTCCCAGCCAGTGAGACTGCCTGAGATCTGGTaGGCAGATGGGTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NPAVLSYLTWSRVSQPVRLPEIW*ADGCRE
Trigger: TTCCCTGCACCCATCTGCTCACCAGATCTCAGGCAG...TCTCACTGGCTGGGAAACCCTAGACCATGTCAGATAGGACAACACTGCTGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATCAGTGTTGTCCTATCTaGCATGGTCTAGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHQCCPI*HGLGFP
Trigger: GGGAAACCCTAGACCATGTCAGATAGGACAACACTG...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAACAGTGTTGTCCTATCTaGCATGGTCTAGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQQCCPI*HGLGFP
Trigger: GGGAAACCCTAGACCATGTCAGATAGGACAACACTG...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp AAAAGAATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTCATACACATCCAGGATaGAGACAATATGGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: KRMTLGPPGQGLSTFQSVHTHPG*RQYGGR
Trigger: GCGGCCCCCATATTGTCTGCATCCTGGATGTGTATG...AACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCATTCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCGAAACTGGATGGCAGTaGCAATATCCCGCATTATCT +
Preference number: 4 (lower is better)
Translates to: GPWSPWQPMANAFLKARPETGWQ*QYPALS
Trigger: AGATAATGCGGGATATTGGCACTGCCATCCAGTTTC...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp TCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGCAATGTTATGGCTGTaGAGAAACTGGATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SRPGPSAHPTGRCLCGRWAMLWL*RNWMAV
Trigger: CACTGCCATCCAGTTTCTGCACAGCCATAACATTGC...CCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp CCCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGGTGAGCTTAAGCACTaGGTCTTTCTCCTTAGATGT +
Preference number: 4 (lower is better)
Translates to: PQGRGEPSIAPPPLLAHSGELKH*VFLLRC
Trigger: ACATCTAAGGAGAAAGACGCAGTGCTTAAGCTCACC...TGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTGTGCAGAAACTGGATaGCAGTGCCAATATCCCGCA +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHCAETG*QCQYPA
Trigger: TGCGGGATATTGGCACTGCCATCCAGTTTCTGCACA...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAATGGCTGTGCAGAAACTaGATGGCAGTGCCAATATCC +
Preference number: 4 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQWLCRN*MAVPIS
Trigger: GGATATTGGCACTGCCATCCAGTTTCTGCACAGCCA...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CCTGACTTCAACAGAGAGGGGCTTTCCTGCCTGAGATCTGGTGAGCAGATGGGTGGCACTACCATCGATTaGTTGATCCAGGGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: PDFNREGLSCLRSGEQMGGTTID*LIQGWF
Trigger: GAACCACCCCTGGATCAACCAATCGATGGTAGTGCC...ACCCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCTCTCTGTTGAAGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CTGGGCCAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCGTGGAGTGGGGTCTGTaGCACTACCATCGATTGGTT +
Preference number: 4 (lower is better)
Translates to: LGQRSEGGLGSGSSILKFVEWGL*HYHRLV
Trigger: AACCAATCGATGGTAGTGCCACAGACCCCACTCCAC...GAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGGGCCCCATGAGCTACTaGTTGTTGCAGCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQGPMSY*LLQPCE
Trigger: CTCACAGGGCTGCAACAACCAGTAGCTCATGGGGCC...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAAAGAATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTAGCCACAACTCCCAGTaGCCTAGAAAGCTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KRMTLGPPGQGLSTFQSVSHNSQ*PRKLRP
Trigger: TGGCCTTAGCTTTCTAGGCCACTGGGAGTTGTGGCT...AACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCATTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGCTAAGGCTACCATGGTaGGGTGGGGCTGGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQLRLPW*GGAGKL
Trigger: GAGCTTACCAGCCCCACCCCACCATGGTAGCCTTAG...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp CAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCCGAGTGTGGTCATCTCCTCCTTaGCTTCGTCCCAGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: QRSEGGLGSGSSILKFRVWSSPP*LRPSGL
Trigger: AAGACCACTGGGACGAAGTCAAGGAGGAGATGACCA...CACTCGGAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGCTCCTGGCCAGGGCCTaGGCACATTTCAGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQLLARA*AHFSLL
Trigger: TAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAG...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp TGGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGAGGCCTCACTATCCCGCATTATCTCTaGAGCTTCTCTCTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: WPRKLRPCTRAGQHRGLTIPHYL*SFSLSE
Trigger: TTCACTGAGAGAGAAGCTGCAGAGATAATGCGGGAT...AGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp TGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCAGACAGCGCTTGCCATaGTGCATGTTCTCATACACA +
Preference number: 4 (lower is better)
Translates to: WSPWQPMANAFLKARPICRQRLP*CMFSYT
Trigger: TGTGTATGAGAACATGCACCATGGCAAGCGCTGTCT...GCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAAAGACAGCGCTTGCCATaGTGCATGTTCTCATACACA +
Preference number: 4 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQRQRLP*CMFSYT
Trigger: TGTGTATGAGAACATGCACCATGGCAAGCGCTGTCT...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AAAAGAATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTCACCATGGCAACCAATaGCCAATGCCTTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KRMTLGPPGQGLSTFQSVHHGNQ*PMPFSR
Trigger: CCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTG...AACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCATTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAATTGTCCTATCTGACATaGTCTAGGGTTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQLSYLT*SRVSQP
Trigger: TGGCTGGGAAACCCTAGACCATGTCAGATAGGACAA...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp AAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATATCCCGCATTATCTCTaGAGCTTCTCTCTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: KAEVNPQSPLLPYSLTQHIPHYL*SFSLSE
Trigger: TTCACTGAGAGAGAAGCTGCAGAGATAATGCGGGAT...ATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGGGCACTACCATCGATTaGTTGATCCAGGGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQGTTID*LIQGWF
Trigger: GAACCACCCCTGGATCAACCAATCGATGGTAGTGCC...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp CCTGACTTCAACAGAGAGGGGCTTTCCTGCCTGAGATCTGGTGAGCAGATGGGTATCCCGCATTATCTCTaGAGCTTCTCTCTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: PDFNREGLSCLRSGEQMGIPHYL*SFSLSE
Trigger: TTCACTGAGAGAGAAGCTGCAGAGATAATGCGGGAT...ACCCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCTCTCTGTTGAAGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp TACCATGGTGGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTTCAGTTTTCTCACCCTaGCATTTCCTAGCATTTGTT +
Preference number: 4 (lower is better)
Translates to: YHGGVGLVSSDQPGKALSSVFSP*HFLAFV
Trigger: AACAAATGCTAGGAAATGGCAGGGTGAGAAAACTGA...AGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCCACCATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS-3UTR GCA 90 bp CAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCCGAGTGGAAACTGGATGGCAGTaGCAATATCCCGCATTATCT +
Preference number: 4 (lower is better)
Translates to: QRSEGGLGSGSSILKFRVETGWQ*QYPALS
Trigger: AGATAATGCGGGATATTGGCACTGCCATCCAGTTTC...CACTCGGAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp CAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCCGAGTGGGTGAGCTTAAGCACTaGGTCTTTCTCCTTAGATGT +
Preference number: 4 (lower is better)
Translates to: QRSEGGLGSGSSILKFRVGELKH*VFLLRC
Trigger: ACATCTAAGGAGAAAGACGCAGTGCTTAAGCTCACC...CACTCGGAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AATGGTGTTTATTACTATCTGGATGTAAAACCCAGCAGTGTTGTCCTATCTGACGCGCTGAGTGCCATCTaGGCTGGGGCTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: NGVYYYLDVKPSSVVLSDALSAI*AGAAAR
Trigger: CCTTGCTGCAGCCCCAGCCCAGATGGCACTCAGCGC...GTCAGATAGGACAACACTGCTGGGTTTTACATCCAGATAGTAATAAACACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp AATGGTGTTTATTACTATCTGGATGTAAAACCCAGCAGTGTTGTCCTATCTGACGGGTTTCCCAGCCAGTaGGAGAGGGGCCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: NGVYYYLDVKPSSVVLSDGFPSQ*ERGQEG
Trigger: TCCTTCCTGGCCCCTCTCTCACTGGCTGGGAAACCC...GTCAGATAGGACAACACTGCTGGGTTTTACATCCAGATAGTAATAAACACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGGAAACTGGATGGCAGTaGCAATATCCCGCATTATCT +
Preference number: 4 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQETGWQ*QYPALS
Trigger: AGATAATGCGGGATATTGGCACTGCCATCCAGTTTC...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp AACCCAGCAGTGTTGTCCTATCTGACATGGTCTAGGGTTTCCCAGCCAGTGAGAGGTGAGCTTAAGCACTaGGTCTTTCTCCTTAGATGT +
Preference number: 4 (lower is better)
Translates to: NPAVLSYLTWSRVSQPVRGELKH*VFLLRC
Trigger: ACATCTAAGGAGAAAGACGCAGTGCTTAAGCTCACC...TCTCACTGGCTGGGAAACCCTAGACCATGTCAGATAGGACAACACTGCTGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GTCAGGGTCCTCCATCCTGAAGTTCCGAGTGACAAATTAAAACACAACAAAATATGGCCTGGCCCGTGTTaGAGTAGAAGGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VRVLHPEVPSDKLKHNKIWPGPC*SRRVGS
Trigger: GCTTCCCACCCTTCTACTCCAACACGGGCCAGGCCA...TATTTTGTTGTGTTTTAATTTGTCACTCGGAACTTCAGGATGGAGGACCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp GTCAGGGTCCTCCATCCTGAAGTTCCGAGTGACAAATTAAAACACAACAAAATACAGCTTCTCTCTCAGTaGAAGCCTGGTCGCCACGCT +
Preference number: 4 (lower is better)
Translates to: VRVLHPEVPSDKLKHNKIQLLSQ*KPGRHA
Trigger: AGCGTGGCGACCAGGCTTTCACTGAGAGAGAAGCTG...TATTTTGTTGTGTTTTAATTTGTCACTCGGAACTTCAGGATGGAGGACCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp GTCAGGGTCCTCCATCCTGAAGTTCCGAGTGACAAATTAAAACACAACAAAATATCCTCCAAGGCCCCATaGGCTACTGGTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VRVLHPEVPSDKLKHNKISSKAP*ATGCCS
Trigger: GCTGCAACAACCAGTAGCTCATGGGGCCTTGGAGGA...TATTTTGTTGTGTTTTAATTTGTCACTCGGAACTTCAGGATGGAGGACCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR GCA 90 bp AATGGTGTTTATTACTATCTGGATGTAAAACCCAGCAGTGTTGTCCTATCTGACTGGTCTTTGTCCTCCTaGAGCACTCGGGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: NGVYYYLDVKPSSVVLSDWSLSS*STRAVW
Trigger: CCACACGGCCCGAGTGCTGCAGGAGGACAAAGACCA...GTCAGATAGGACAACACTGCTGGGTTTTACATCCAGATAGTAATAAACACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR GCA 90 bp AATGGTGTTTATTACTATCTGGATGTAAAACCCAGCAGTGTTGTCCTATCTGACAGGAAAGGCCCTCTCTaGCCTACTCAGGCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: NGVYYYLDVKPSSVVLSDRKGPL*PTQAQA
Trigger: GGCTTGGGCCTGAGTAGGGCAGAGAGGGCCTTTCCT...GTCAGATAGGACAACACTGCTGGGTTTTACATCCAGATAGTAATAAACACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AATGGTGTTTATTACTATCTGGATGTAAAACCCAGCAGTGTTGTCCTATCTGACTGGCCTGGCCCGTGTTaGAGTAGAAGGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: NGVYYYLDVKPSSVVLSDWPGPC*SRRVGS
Trigger: GCTTCCCACCCTTCTACTCCAACACGGGCCAGGCCA...GTCAGATAGGACAACACTGCTGGGTTTTACATCCAGATAGTAATAAACACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp GTCAGGGTCCTCCATCCTGAAGTTCCGAGTGACAAATTAAAACACAACAAAATAGGCCCCATGAGCTACTaGTTGTTGCAGCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VRVLHPEVPSDKLKHNKIGPMSY*LLQPCE
Trigger: CTCACAGGGCTGCAACAACCAGTAGCTCATGGGGCC...TATTTTGTTGTGTTTTAATTTGTCACTCGGAACTTCAGGATGGAGGACCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR GCA 90 bp GTCAGGGTCCTCCATCCTGAAGTTCCGAGTGACAAATTAAAACACAACAAAATAGCAACCAATGGCCAATaGCTTTCTCAAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VRVLHPEVPSDKLKHNKIATNGQ*LSQGQA
Trigger: GGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGC...TATTTTGTTGTGTTTTAATTTGTCACTCGGAACTTCAGGATGGAGGACCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CCA 90 bp AATGGTGTTTATTACTATCTGGATGTAAAACCCAGCAGTGTTGTCCTATCTGACTCACAGGCAGCAACGTaGTCCCTGGTCACCATGGCA +
Preference number: 4 (lower is better)
Translates to: NGVYYYLDVKPSSVVLSDSQAAT*SLVTMA
Trigger: TGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGA...GTCAGATAGGACAACACTGCTGGGTTTTACATCCAGATAGTAATAAACACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp GTCAGGGTCCTCCATCCTGAAGTTCCGAGTGACAAATTAAAACACAACAAAATATGGTCATCTCCTCCTTaGCTTCGTCCCAGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: VRVLHPEVPSDKLKHNKIWSSPP*LRPSGL
Trigger: AAGACCACTGGGACGAAGTCAAGGAGGAGATGACCA...TATTTTGTTGTGTTTTAATTTGTCACTCGGAACTTCAGGATGGAGGACCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR TCA 90 bp GTCAGGGTCCTCCATCCTGAAGTTCCGAGTGACAAATTAAAACACAACAAAATACTTTTGTTAAAAGAATaGCCCTGGGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VRVLHPEVPSDKLKHNKILLLKE*PWALLA
Trigger: GGCCAGGAGGGCCCAGGGTCATTCTTTTAACAAAAG...TATTTTGTTGTGTTTTAATTTGTCACTCGGAACTTCAGGATGGAGGACCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR GCA 90 bp GTCAGGGTCCTCCATCCTGAAGTTCCGAGTGACAAATTAAAACACAACAAAATAGCAATGTTATGGCTGTaGAGAAACTGGATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VRVLHPEVPSDKLKHNKIAMLWL*RNWMAV
Trigger: CACTGCCATCCAGTTTCTGCACAGCCATAACATTGC...TATTTTGTTGTGTTTTAATTTGTCACTCGGAACTTCAGGATGGAGGACCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CCA 90 bp AATGGTGTTTATTACTATCTGGATGTAAAACCCAGCAGTGTTGTCCTATCTGACTGGCTGTGCAGAAACTaGATGGCAGTGCCAATATCC +
Preference number: 4 (lower is better)
Translates to: NGVYYYLDVKPSSVVLSDWLCRN*MAVPIS
Trigger: GGATATTGGCACTGCCATCCAGTTTCTGCACAGCCA...GTCAGATAGGACAACACTGCTGGGTTTTACATCCAGATAGTAATAAACACCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp AGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCCAAGCACTCCAGCACTTaGCCGTTCACACCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RAGLHREAGRPDPAASGPKHSST*PFTPRP
Trigger: GGGCCTGGGTGTGAACGGCAAAGTGCTGGAGTGCTT...GGGCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp AGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCCCTGGTCATCTCCTCCTaGACTTCGTCCCAGTGGTCT +
Preference number: 5 (lower is better)
Translates to: RAGLHREAGRPDPAASGPLVISS*TSSQWS
Trigger: AGACCACTGGGACGAAGTCAAGGAGGAGATGACCAG...GGGCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp ATCGCCCCTCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTTCAGCGTCGCGATaGGTCAGCTCGCGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: IAPPPLLAHSAFTGSNVVPSASR*VSSRGP
Trigger: GGGGCCCCGCGAGCTGACCAATCGCGACGCTGAAGG...GACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGAGGGGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS-3UTR CAA 90 bp GGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCGTCCACGCGCTGCTATaGGCCCTCCCCGACCGCTCG +
Preference number: 5 (lower is better)
Translates to: GHHGNQWPMPFSRPGPSAVHALL*ALPDRS
Trigger: CGAGCGGTCGGGGAGGGCCAATAGCAGCGCGTGGAC...GGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS-3UTR CAA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCACCTCCTGCCGGGCCTaGGGGCTGTCATACAGGAGC +
Preference number: 5 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGTSCRA*GLSYRS
Trigger: GCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGGT...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp GCAGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCTTGTTGAGGAGCCGGTaGTTAGAGGTCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: AGLDCTGRQADRIQQPQGLLRSR*LEVFRS
Trigger: GGACCTGAAGACCTCTAACAACCGGCTCCTCAACAA...GCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS GCA 90 bp GCCGGCTTGACCTCAGTGGACCCACTCATTTCTGGAACTGTCCTCTaGACCCCGCCCTGCCCTAAGTCCCGCTCCAGATCTCACCCCATG +
Preference number: 5 (lower is better)
Translates to: AGLTSVDPLISGTVL*TPPCPKSRSRSHPM
Trigger: CATGGGGTGAGATCTGGAGCGGGACTTAGGGCAGGGCGGGGTGCAGAGGACAGTTCCAGAAATGAGTGGGTCCACTGAGGTCAAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS-3UTR CAA 90 bp AGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCCCAGTAGGTTTTCAGGCTaGACATCTCGGTGGGCAATG +
Preference number: 5 (lower is better)
Translates to: RAGLHREAGRPDPAASGPSRFSG*TSRWAM
Trigger: CATTGCCCACCGAGATGTCAAGCCTGAAAACCTACT...GGGCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp GCAGGGCTGGACTGCACAGGGAGGCAGGCAGACCGGATCCAGCAGCCTCAGGGCACTACCATCGATTGGTaGATCCAGGGGTGGTTCATG +
Preference number: 5 (lower is better)
Translates to: AGLDCTGRQADRIQQPQGTTIDW*IQGWFM
Trigger: CATGAACCACCCCTGGATCAACCAATCGATGGTAGT...GCCCTGAGGCTGCTGGATCCGGTCTGCCTGCCTCCCTGTGCAGTCCAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCGCTTCTAGTGGCACCTaGCTGAGGTACCGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPASSGT*LRYRRG
Trigger: CCCTCGCCGGTACCTCAGCAAGGTGCCACTAGAAGC...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357955.6
CDS-3UTR CAA 90 bp CACAGAGGCCTCACTCGGGCCAACCTAGCTAAAGGTGCTGCTATGGCAGCAGGCAAGCACTCCAGCACTTaGCCGTTCACACCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: HRGLTRANLAKGAAMAAGKHSST*PFTPRP
Trigger: GGGCCTGGGTGTGAACGGCAAAGTGCTGGAGTGCTT...GCCTGCTGCCATAGCAGCACCTTTAGCTAGGTTGGCCCGAGTGAGGCCTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp AAAAGAATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTTGGCGGCAACGCACCTaGCTGAGGTACCGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: KRMTLGPPGQGLSTFQSVWRQRT*LRYRRG
Trigger: CCCTCGCCGGTACCTCAGCAAGGTGCGTTGCCGCCA...AACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCATTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621469.5
CDS TCA 90 bp CCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTATGCAGGCTaGGAGGCCAGGCTCCTCCAAGGCCCCATGAGCTACTGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PSWPGPEHISVCYAG*EARLLQGPMSYWLL
Trigger: CAACAACCAGTAGCTCATGGGGCCTTGGAGGAGCCTGGCCTCTCAGCCTGCATAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS GCA 90 bp GGGCACACTTCTGTCCAGTGCGCCGATGGAAGCACTCCAGCACTTTaGCGTTCACACCCAGGCCCAGCACCTGCTTGGACAACTGGTAGT +
Preference number: 5 (lower is better)
Translates to: GHTSVQCADGSTPAL*RSHPGPAPAWTTGS
Trigger: ACTACCAGTTGTCCAAGCAGGTGCTGGGCCTGGGTGTGAACGGCAAAGTGCTGGAGTGCTTCCATCGGCGCACTGGACAGAAGTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000457064.1
ENST00000621469.5
CDS GCA 90 bp CCTTGGGGCTGTCATACAGGAGCTTCAGGGCACACTTCTGTCCAGTaGGCCGATGGAAGCACTCCAGCACTTTGCCGTTCACACCCAGGC +
Preference number: 5 (lower is better)
Translates to: PWGCHTGASGHTSVQ*ADGSTPALCRSHPG
Trigger: GCCTGGGTGTGAACGGCAAAGTGCTGGAGTGCTTCCATCGGCGCACTGGACAGAAGTGTGCCCTGAAGCTCCTGTATGACAGCCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000457064.1
ENST00000621469.5
CDS-3UTR CAA 90 bp ATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTATGCAGAAGCACTCCAGCACTTaGCCGTTCACACCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: MTLGPPGQGLSTFQSVMQKHSST*PFTPRP
Trigger: GGGCCTGGGTGTGAACGGCAAAGTGCTGGAGTGCTT...CTGCATAACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp TCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGTCTGACCACTCAGGATaGGGGAAGCCGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: SRPGPSAHPTGRCLCGRWSDHSG*GKPYWP
Trigger: GGGCCAGTACGGCTTCCCCAATCCTGAGTGGTCAGA...CCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CAA 90 bp AAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGGATCTGACCACTCAGGATaGGGGAAGCCGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: KARPICPSHREMSLWKMGSDHSG*GKPYWP
Trigger: GGGCCAGTACGGCTTCCCCAATCCTGAGTGGTCAGA...TCCCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CAA 90 bp CCCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCACCCATGAGCTACTGGTaGTTGCAGCCCTGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: PQGRGEPSIAPPPLLAHSPMSYW*LQPCEA
Trigger: TGCCTCACAGGGCTGCAACAACCAGTAGCTCATGGG...TGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CAA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCCTGCGTGTCAGGCACTaGTCAGGCAGTATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: GPWSPWQPMANAFLKARPLRVRH*SGSIRH
Trigger: GTGCCTGATACTGCCTGACAAGTGCCTGACACGCAG...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAATCTGACCACTCAGGATaGGGGAAGCCGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQSDHSG*GKPYWP
Trigger: GGGCCAGTACGGCTTCCCCAATCCTGAGTGGTCAGA...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CAA 90 bp GGTCCCTGGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCAGGCGGATCAGCTGCTaGGCATCCTCAGAGACTTCT +
Preference number: 5 (lower is better)
Translates to: GPWSPWQPMANAFLKARPRRISC*ASSETS
Trigger: AGAAGTCTCTGAGGATGCCAAGCAGCTGATCCGCCT...GGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACCAGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CAA 90 bp TACCATGGTGGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTCCCATGAGCTACTGGTaGTTGCAGCCCTGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: YHGGVGLVSSDQPGKALSPMSYW*LQPCEA
Trigger: TGCCTCACAGGGCTGCAACAACCAGTAGCTCATGGG...AGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCCACCATGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp TCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGCCCATGAGCTACTGGTaGTTGCAGCCCTGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: SRPGPSAHPTGRCLCGRWPMSYW*LQPCEA
Trigger: TGCCTCACAGGGCTGCAACAACCAGTAGCTCATGGG...CCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CAA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCCCCATGAGCTACTGGTaGTTGCAGCCCTGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPPMSYW*LQPCEA
Trigger: TGCCTCACAGGGCTGCAACAACCAGTAGCTCATGGG...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CAA 90 bp CATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCATCCCCTGCGTGTCAGGCACTaGTCAGGCAGTATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: HGNQWPMPFSRPGPSAHPLRVRH*SGSIRH
Trigger: GTGCCTGATACTGCCTGACAAGTGCCTGACACGCAG...GGGATGGGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp GGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCCTGCGTGTCAGGCACTaGTCAGGCAGTATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: GHHGNQWPMPFSRPGPSALRVRH*SGSIRH
Trigger: GTGCCTGATACTGCCTGACAAGTGCCTGACACGCAG...GGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp GGTCACCATGGCAACCAATGGCCAATGCCTTTCTCAAGGCCAGGCCCATCTGCCAGGCGGATCAGCTGCTaGGCATCCTCAGAGACTTCT +
Preference number: 5 (lower is better)
Translates to: GHHGNQWPMPFSRPGPSARRISC*ASSETS
Trigger: AGAAGTCTCTGAGGATGCCAAGCAGCTGATCCGCCT...GGCAGATGGGCCTGGCCTTGAGAAAGGCATTGGCCATTGGTTGCCATGGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CAA 90 bp TGGCCTAGAAAGCTAAGGCCATGCACCAGGGCAGGACAGCACAGAGGCCTCACTCTGGTCATCTCCTCGTaGATCCAGGGGTGGTTCATG +
Preference number: 5 (lower is better)
Translates to: WPRKLRPCTRAGQHRGLTLVISS*IQGWFM
Trigger: CATGAACCACCCCTGGATCAACGAGGAGATGACCAG...AGTGAGGCCTCTGTGCTGTCCTGCCCTGGTGCATGGCCTTAGCTTTCTAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451680.1
CDS-3UTR CAA 90 bp TCAAGGCCAGGCCCATCTGCCCATCCCACAGGGAGATGTCTCTGTGGAAGATGGATGAGGAGACAGCGCTaGCCATGGTGCATGTTCTCA +
Preference number: 5 (lower is better)
Translates to: SRPGPSAHPTGRCLCGRWMRRQR*PWCMFS
Trigger: TGAGAACATGCACCATGGCAAGCGCTGTCTCCTCAT...CCATCTTCCACAGAGACATCTCCCTGTGGGATGGGCAGATGGGCCTGGCCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp CCCAAGGCAGAGGTGAACCCTCAATCGCCCCTCCTCCCTTACTCGCTCACTCAGAGTAGGTTTTCAGGCTaGACATCTCGGTGGGCAATG +
Preference number: 5 (lower is better)
Translates to: PKAEVNPQSPLLPYSLTQSRFSG*TSRWAM
Trigger: CATTGCCCACCGAGATGTCAAGCCTGAAAACCTACT...CTGAGTGAGCGAGTAAGGGAGGAGGGGCGATTGAGGGTTCACCTCTGCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp TCCTCCCTTACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCAAGGCGGATCAGCTGCTaGGCATCCTCAGAGACTTCT +
Preference number: 5 (lower is better)
Translates to: SSLTRSLSIHRQQRGPWSRRISC*ASSETS
Trigger: AGAAGTCTCTGAGGATGCCAAGCAGCTGATCCGCCT...TGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGTAAGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CAA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAAATGAGCTACTGGTTGTaGCAGCCCTGTGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQMSYWL*QPCEAE
Trigger: CTCTGCCTCACAGGGCTGCAACAACCAGTAGCTCAT...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS GCA 90 bp GGAGACAGCGCTTGCCATGGTGCATGTTCTCATACACATCCAGGATaGAGACAATATGGGGGCCGCCAGAAGCCTGCCAGTGATGGTCTA +
Preference number: 5 (lower is better)
Translates to: GDSACHGACSHTHPG*RQYGGRQKPASDGL
Trigger: TAGACCATCACTGGCAGGCTTCTGGCGGCCCCCATATTGTCTGCATCCTGGATGTGTATGAGAACATGCACCATGGCAAGCGCTGTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000457064.1
ENST00000621469.5
CDS CCA 90 bp TGTCTCTGCTTGCTTTCTCAAATCTGTAGTCTCTTCTCCCCTGACTaGCAGGGCCGGCCAGAAACCAGTGCCAGCCAAGACTGGATGGTC +
Preference number: 5 (lower is better)
Translates to: CLCLLSQICSLFSPD*QGRPETSASQDWMV
Trigger: GACCATCCAGTCTTGGCTGGCACTGGTTTCTGGCCGGCCCTGCCAGTCAGGGGAGAAGAGACTACAGATTTGAGAAAGCAAGCAGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS-3UTR CAA 90 bp AGGAGTGAGAATGAGAGGGCCAGCCAGTGTGTGAGAAATCAGCCTCCCCAAGGCATGAGGAGACAGCGCTaGCCATGGTGCATGTTCTCA +
Preference number: 5 (lower is better)
Translates to: RSENERASQCVRNQPPQGMRRQR*PWCMFS
Trigger: TGAGAACATGCACCATGGCAAGCGCTGTCTCCTCAT...GCCTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCCTCTCATTCTCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGTCTGACCACTCAGGATaGGGGAAGCCGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQSDHSG*GKPYWP
Trigger: GGGCCAGTACGGCTTCCCCAATCCTGAGTGGTCAGA...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp CCTGACTTCAACAGAGAGGGGCTTTCCTGCCTGAGATCTGGTGAGCAGATGGGTAGGCGGATCAGCTGCTaGGCATCCTCAGAGACTTCT +
Preference number: 5 (lower is better)
Translates to: PDFNREGLSCLRSGEQMGRRISC*ASSETS
Trigger: AGAAGTCTCTGAGGATGCCAAGCAGCTGATCCGCCT...ACCCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCTCTCTGTTGAAGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp TACCATGGTGGGGTGGGGCTGGTAAGCTCTGATCAGCCAGGAAAGGCCCTCTCTACTACCATCGATTGGTaGATCCAGGGGTGGTTCATG +
Preference number: 5 (lower is better)
Translates to: YHGGVGLVSSDQPGKALSTTIDW*IQGWFM
Trigger: CATGAACCACCCCTGGATCAACCAATCGATGGTAGT...AGAGAGGGCCTTTCCTGGCTGATCAGAGCTTACCAGCCCCACCCCACCATGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp AAAAGAATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTCTGGTCATCTCCTCCTaGACTTCGTCCCAGTGGTCT +
Preference number: 5 (lower is better)
Translates to: KRMTLGPPGQGLSTFQSVLVISS*TSSQWS
Trigger: AGACCACTGGGACGAAGTCAAGGAGGAGATGACCAG...AACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCATTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp CTGGGCCAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCATGAGCTACTGGTTGTaGCAGCCCTGTGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LGQRSEGGLGSGSSILKFMSYWL*QPCEAE
Trigger: CTCTGCCTCACAGGGCTGCAACAACCAGTAGCTCAT...GAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CAA 90 bp AAAAGAATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTATGAGCTACTGGTTGTaGCAGCCCTGTGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: KRMTLGPPGQGLSTFQSVMSYWL*QPCEAE
Trigger: CTCTGCCTCACAGGGCTGCAACAACCAGTAGCTCAT...AACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCATTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS-3UTR CAA 90 bp CCTGACTTCAACAGAGAGGGGCTTTCCTGCCTGAGATCTGGTGAGCAGATGGGTATGAGGAGACAGCGCTaGCCATGGTGCATGTTCTCA +
Preference number: 5 (lower is better)
Translates to: PDFNREGLSCLRSGEQMGMRRQR*PWCMFS
Trigger: TGAGAACATGCACCATGGCAAGCGCTGTCTCCTCAT...ACCCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCTCTCTGTTGAAGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp AGGAGTGAGAATGAGAGGGCCAGCCAGTGTGTGAGAAATCAGCCTCCCCAAGGCAGTAGGTTTTCAGGCTaGACATCTCGGTGGGCAATG +
Preference number: 5 (lower is better)
Translates to: RSENERASQCVRNQPPQGSRFSG*TSRWAM
Trigger: CATTGCCCACCGAGATGTCAAGCCTGAAAACCTACT...GCCTTGGGGAGGCTGATTTCTCACACACTGGCTGGCCCTCTCATTCTCACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp ACTCGCTCACTCAGCATTCACAGGCAGCAACGTGGTCCCTGGTCACCATGGCAATGTCTGCAGGGCATTTaGGGTGGTCTCCTTAGCAAA +
Preference number: 5 (lower is better)
Translates to: TRSLSIHRQQRGPWSPWQCLQGI*GGLLSK
Trigger: TTTGCTAAGGAGACCACCCAAAATGCCCTGCAGACA...TTGCCATGGTGACCAGGGACCACGTTGCTGCCTGTGAATGCTGAGTGAGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp AAAAGAATGACCCTGGGCCCTCCTGGCCAGGGCCTGAGCACATTTCAGTCTGTTTTGTTGAGGAGCCGGTaGTTAGAGGTCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KRMTLGPPGQGLSTFQSVLLRSR*LEVFRS
Trigger: GGACCTGAAGACCTCTAACAACCGGCTCCTCAACAA...AACAGACTGAAATGTGCTCAGGCCCTGGCCAGGAGGGCCCAGGGTCATTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS TCA 90 bp AGGGCCGGCCAGAAACCAGTGCCAGCCAAGACTGGATGGTCTGCCTaGTTCGAAAAGTTGGGGCGTGCTTTCTCCTTCAACTCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: RAGQKPVPAKTGWSA*FEKLGRAFSFNSFK
Trigger: TTTGAAAGAGTTGAAGGAGAAAGCACGCCCCAACTTTTCGAATCAGGCAGACCATCCAGTCTTGGCTGGCACTGGTTTCTGGCCGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS-3UTR CAA 90 bp CCTGACTTCAACAGAGAGGGGCTTTCCTGCCTGAGATCTGGTGAGCAGATGGGTTGTCTGCAGGGCATTTaGGGTGGTCTCCTTAGCAAA +
Preference number: 5 (lower is better)
Translates to: PDFNREGLSCLRSGEQMGCLQGI*GGLLSK
Trigger: TTTGCTAAGGAGACCACCCAAAATGCCCTGCAGACA...ACCCATCTGCTCACCAGATCTCAGGCAGGAAAGCCCCTCTCTGTTGAAGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGCTGGTCATCTCCTCCTaGACTTCGTCCCAGTGGTCT +
Preference number: 5 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQLVISS*TSSQWS
Trigger: AGACCACTGGGACGAAGTCAAGGAGGAGATGACCAG...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp CTGAGATCTGGTGAGCAGATGGGTGCAGGGAAAGTATGCTGGCTTTTGTCACAGATGAGCTACTGGTTGTaGCAGCCCTGTGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LRSGEQMGAGKVCWLLSQMSYWL*QPCEAE
Trigger: CTCTGCCTCACAGGGCTGCAACAACCAGTAGCTCAT...CTGTGACAAAAGCCAGCATACTTTCCCTGCACCCATCTGCTCACCAGATCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS GCA 90 bp CCTTCCATGCATTCCATGATGATGAGGAGACAGCGCTTGCCATGGTaGATGTTCTCATACACATCCAGGATGCAGACAATATGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: PSMHSMMMRRQRLPW*MFSYTSRMQTIWGP
Trigger: CGGCCCCCATATTGTCTGCATCCTGGATGTGTATGAGAACATGCACCATGGCAAGCGCTGTCTCCTCATCATCATGGAATGCATGGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000621469.5
CDS-3UTR CAA 90 bp CAGAGATCTGAAGGAGGTTTAGGGTCAGGGTCCTCCATCCTGAAGTTCCGAGTGTGTCTGCAGGGCATTTaGGGTGGTCTCCTTAGCAAA +
Preference number: 5 (lower is better)
Translates to: QRSEGGLGSGSSILKFRVCLQGI*GGLLSK
Trigger: TTTGCTAAGGAGACCACCCAAAATGCCCTGCAGACA...CACTCGGAACTTCAGGATGGAGGACCCTGACCCTAAACCTCCTTCAGATCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000621469.5
CDS CCA 90 bp CCACCTTCCATGCATTCCATGATGATGAGGAGACAGCGCTTGCCATaGTGCATGTTCTCATACACATCCAGGATGCAGACAATATGGGGG +
Preference number: 5 (lower is better)
Translates to: PPSMHSMMMRRQRLP*CMFSYTSRMQTIWG
Trigger: CCCCCATATTGTCTGCATCCTGGATGTGTATGAGAACATGCACCATGGCAAGCGCTGTCTCCTCATCATCATGGAATGCATGGAAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000621469.5
CDS CCA 90 bp AACCAGTGCCAGCCAAGACTGGATGGTCTGCCTGATTCGAAAAGTTaGGGCGTGCTTTCTCCTTCAACTCTTTCAAAGAAAACGTTCTTG +
Preference number: 5 (lower is better)
Translates to: NQCQPRLDGLPDSKS*GVLSPSTLSKKTFL
Trigger: CAAGAACGTTTTCTTTGAAAGAGTTGAAGGAGAAAGCACGCCCCAACTTTTCGAATCAGGCAGACCATCCAGTCTTGGCTGGCACTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS-3UTR CAA 90 bp GTCAGGGTCCTCCATCCTGAAGTTCCGAGTGACAAATTAAAACACAACAAAATATTGTTGAGGAGCCGGTaGTTAGAGGTCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: VRVLHPEVPSDKLKHNKILLRSR*LEVFRS
Trigger: GGACCTGAAGACCTCTAACAACCGGCTCCTCAACAA...TATTTTGTTGTGTTTTAATTTGTCACTCGGAACTTCAGGATGGAGGACCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS TCA 72 bp GCGCTTCTAGTGGCACCTGGCGGCAACGCACCTTGCTaGGGTACCGGCGAGGGGCAGGAGAGGCGGTCGCGG +
Preference number: 6 (lower is better)
Translates to: ALLVAPGGNAPC*GTGEGQERRSR
Trigger: CCGCGACCGCCTCTCCTGCCCCTCGCCGGTACCTCAGCAAGGTGCGTTGCCGCCAGGTGCCACTAGAAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430409.5
ENST00000621469.5
CDS GCA 72 bp GAGGGGCGCACGGGAGAACAGGGGCTTCGTGCTAGCTaGCGGGCATTGGGAGGGCTTGACGGGCCAGAGGTG +
Preference number: 6 (lower is better)
Translates to: EGRTGEQGLRAS*RALGGLDGPEV
Trigger: CACCTCTGGCCCGTCAAGCCCTCCCAATGCCCGGCAGCTAGCACGAAGCCCCTGTTCTCCCGTGCGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486712.5
CDS CCA 72 bp CTGGGTAGCTTCAGCCCCGGGTCCACGCGCTGCTATTaGCCCTCCCCGACCGCTCGGCTCCACCTTCAGCGT +
Preference number: 6 (lower is better)
Translates to: LGSFSPGSTRCY*PSPTARLHLQR
Trigger: ACGCTGAAGGTGGAGCCGAGCGGTCGGGGAGGGCCAATAGCAGCGCGTGGACCCGGGGCTGAAGCTACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446044.5
ENST00000486712.5
CDS CCA 72 bp CCAACACACCCCAGCCTTGGAGCCTCTGAACTGGGCTaGGCTGCGAGCCCGGGGCAAGCTGGGAGTGCGGGA +
Preference number: 6 (lower is better)
Translates to: PTHPSLGASELG*AASPGQAGSAG
Trigger: TCCCGCACTCCCAGCTTGCCCCGGGCTCGCAGCCCAGCCCAGTTCAGAGGCTCCAAGGCTGGGGTGTGTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457064.1
CDS TCA 72 bp ATGCAGACAATATGGGGGCCGCCAGAAGCCTGCCAGTaGTGGTCTACCTCCTGCCGGGCCTTGGGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: MQTIWGPPEACQ*WSTSCRALGLS
Trigger: TGACAGCCCCAAGGCCCGGCAGGAGGTAGACCATCACTGGCAGGCTTCTGGCGGCCCCCATATTGTCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000457064.1
ENST00000621469.5
CDS GCA 72 bp TCTGTCCAGTGCGCCGATGGAAGCACTCCAGCACTTTaGCGTTCACACCCAGGCCCAGCACCTGCTTGGACA +
Preference number: 6 (lower is better)
Translates to: SVQCADGSTPAL*RSHPGPAPAWT
Trigger: TGTCCAAGCAGGTGCTGGGCCTGGGTGTGAACGGCAAAGTGCTGGAGTGCTTCCATCGGCGCACTGGACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000457064.1
ENST00000621469.5
CDS CCA 72 bp CTCCTGCAGCACTCGGGCCGTGTGGAGTGGGGTCTGTaGCACTACCATCGATTGGTTGATCCAGGGGTGGTT +
Preference number: 6 (lower is better)
Translates to: LLQHSGRVEWGL*HYHRLVDPGVV
Trigger: AACCACCCCTGGATCAACCAATCGATGGTAGTGCCACAGACCCCACTCCACACGGCCCGAGTGCTGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000621469.5
CDS CCA 72 bp TGGCAGGGCCGGCCAGAAACCAGTGCCAGCCAAGACTaGATGGTCTGCCTGATTCGAAAAGTTGGGGCGTGC +
Preference number: 6 (lower is better)
Translates to: WQGRPETSASQD*MVCLIRKVGAC
Trigger: GCACGCCCCAACTTTTCGAATCAGGCAGACCATCCAGTCTTGGCTGGCACTGGTTTCTGGCCGGCCCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS CAA 72 bp TTCTGTCCAGTGCGCCGATGGAAGCACTCCAGCACTTaGCCGTTCACACCCAGGCCCAGCACCTGCTTGGAC +
Preference number: 6 (lower is better)
Translates to: FCPVRRWKHSST*PFTPRPSTCLD
Trigger: GTCCAAGCAGGTGCTGGGCCTGGGTGTGAACGGCAAAGTGCTGGAGTGCTTCCATCGGCGCACTGGACAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000457064.1
ENST00000621469.5
CDS TCA 72 bp GAGGCGGATCAGCTGCTTGGCATCCTCAGAGACTTCTaGCCACTCAGGATTGGGGAAGCCGTACTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: EADQLLGILRDF*PLRIGEAVLAQ
Trigger: CTGGGCCAGTACGGCTTCCCCAATCCTGAGTGGTCAGAAGTCTCTGAGGATGCCAAGCAGCTGATCCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000451680.1
ENST00000621469.5
CDS GCA 72 bp ACCTCAGTGGACCCACTCATTTCTGGAACTGTCCTCTaGACCCCGCCCTGCCCTAAGTCCCGCTCCAGATCT +
Preference number: 6 (lower is better)
Translates to: TSVDPLISGTVL*TPPCPKSRSRS
Trigger: AGATCTGGAGCGGGACTTAGGGCAGGGCGGGGTGCAGAGGACAGTTCCAGAAATGAGTGGGTCCACTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS CCA 72 bp AGGAGCTTCAGGGCACACTTCTGTCCAGTGCGCCGATaGAAGCACTCCAGCACTTTGCCGTTCACACCCAGG +
Preference number: 6 (lower is better)
Translates to: RSFRAHFCPVRR*KHSSTLPFTPR
Trigger: CCTGGGTGTGAACGGCAAAGTGCTGGAGTGCTTCCATCGGCGCACTGGACAGAAGTGTGCCCTGAAGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000457064.1
ENST00000621469.5
CDS CCA 72 bp AAGCCTGCCAGTGATGGTCTACCTCCTGCCGGGCCTTaGGGCTGTCATACAGGAGCTTCAGGGCACACTTCT +
Preference number: 6 (lower is better)
Translates to: KPASDGLPPAGP*GCHTGASGHTS
Trigger: AGAAGTGTGCCCTGAAGCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGGTAGACCATCACTGGCAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000457064.1
ENST00000621469.5
CDS GCA 72 bp AAGTTCTTGGAAATCTGTCAAAGTATTTCCTTTCACTaGTCAGGGCCCCAGACCCGGCGACGGGGCCCGCGC +
Preference number: 6 (lower is better)
Translates to: KFLEICQSISFH*SGPQTRRRGPR
Trigger: GCGCGGGCCCCGTCGCCGGGTCTGGGGCCCTGAGCAGTGAAAGGAAATACTTTGACAGATTTCCAAGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446044.5
CDS CCA 72 bp GTCTTTGTCCTCCTGCAGCACTCGGGCCGTGTGGAGTaGGGTCTGTGGCACTACCATCGATTGGTTGATCCA +
Preference number: 6 (lower is better)
Translates to: VFVLLQHSGRVE*GLWHYHRLVDP
Trigger: TGGATCAACCAATCGATGGTAGTGCCACAGACCCCACTCCACACGGCCCGAGTGCTGCAGGAGGACAAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000621469.5
CDS GCA 72 bp TGTCATACAGGAGCTTCAGGGCACACTTCTGTCCAGTaGGCCGATGGAAGCACTCCAGCACTTTGCCGTTCA +
Preference number: 6 (lower is better)
Translates to: CHTGASGHTSVQ*ADGSTPALCRS
Trigger: TGAACGGCAAAGTGCTGGAGTGCTTCCATCGGCGCACTGGACAGAAGTGTGCCCTGAAGCTCCTGTATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000457064.1
ENST00000621469.5
CDS GCA 72 bp GCTTGCCATGGTGCATGTTCTCATACACATCCAGGATaGAGACAATATGGGGGCCGCCAGAAGCCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: ACHGACSHTHPG*RQYGGRQKPAS
Trigger: ACTGGCAGGCTTCTGGCGGCCCCCATATTGTCTGCATCCTGGATGTGTATGAGAACATGCACCATGGCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000457064.1
ENST00000621469.5
CDS CCA 72 bp TTGCTTTCTCAAATCTGTAGTCTCTTCTCCCCTGACTaGCAGGGCCGGCCAGAAACCAGTGCCAGCCAAGAC +
Preference number: 6 (lower is better)
Translates to: LLSQICSLFSPD*QGRPETSASQD
Trigger: GTCTTGGCTGGCACTGGTTTCTGGCCGGCCCTGCCAGTCAGGGGAGAAGAGACTACAGATTTGAGAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS CAA 72 bp CTTGTCTGGATCTTTCTGGCTGTGGTGACCGCCGGCTaGACCTCAGTGGACCCACTCATTTCTGGAACTGTC +
Preference number: 6 (lower is better)
Translates to: LVWIFLAVVTAG*TSVDPLISGTV
Trigger: GACAGTTCCAGAAATGAGTGGGTCCACTGAGGTCAAGCCGGCGGTCACCACAGCCAGAAAGATCCAGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS TCA 72 bp GCTTCTCTCTCAGTGAAAGCCTGGTCGCCACGCTCCTaGATCCTGCTGAACAACTCACCACCTTCCATGCAT +
Preference number: 6 (lower is better)
Translates to: ASLSVKAWSPRS*ILLNNSPPSMH
Trigger: ATGCATGGAAGGTGGTGAGTTGTTCAGCAGGATTCAGGAGCGTGGCGACCAGGCTTTCACTGAGAGAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000621469.5
CDS TCA 72 bp CAGAAACCAGTGCCAGCCAAGACTGGATGGTCTGCCTaGTTCGAAAAGTTGGGGCGTGCTTTCTCCTTCAAC +
Preference number: 6 (lower is better)
Translates to: QKPVPAKTGWSA*FEKLGRAFSFN
Trigger: GTTGAAGGAGAAAGCACGCCCCAACTTTTCGAATCAGGCAGACCATCCAGTCTTGGCTGGCACTGGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS CCA 72 bp CTCGGTGGGCAATGTTATGGCTGTGCAGAAACTGGATaGCAGTGCCAATATCCCGCATTATCTCTGCAGCTT +
Preference number: 6 (lower is better)
Translates to: LGGQCYGCAETG*QCQYPALSLQL
Trigger: AAGCTGCAGAGATAATGCGGGATATTGGCACTGCCATCCAGTTTCTGCACAGCCATAACATTGCCCACCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000621469.5
CDS CAA 72 bp CCTTCCATGCATTCCATGATGATGAGGAGACAGCGCTaGCCATGGTGCATGTTCTCATACACATCCAGGATG +
Preference number: 6 (lower is better)
Translates to: PSMHSMMMRRQR*PWCMFSYTSRM
Trigger: CATCCTGGATGTGTATGAGAACATGCACCATGGCAAGCGCTGTCTCCTCATCATCATGGAATGCATGGAAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000621469.5
CDS CCA 72 bp ATGCATTCCATGATGATGAGGAGACAGCGCTTGCCATaGTGCATGTTCTCATACACATCCAGGATGCAGACA +
Preference number: 6 (lower is better)
Translates to: MHSMMMRRQRLP*CMFSYTSRMQT
Trigger: TGTCTGCATCCTGGATGTGTATGAGAACATGCACCATGGCAAGCGCTGTCTCCTCATCATCATGGAATGCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000621469.5
CDS CAA 90 bp AACTCACCACCTTCCATGCATTCCATGATGATGAGGAGACAGCGCTaGCCATGGTGCATGTTCTCATACACATCCAGGATGCAGACAATA +
Preference number: 6 (lower is better)
Translates to: NSPPSMHSMMMRRQR*PWCMFSYTSRMQTI
Trigger: TATTGTCTGCATCCTGGATGTGTATGAGAACATGCACCATGGCAAGCGCTGTCTCCTCATCATCATGGAATGCATGGAAGGTGGTGAGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357955.6
ENST00000430409.5
ENST00000446044.5
ENST00000621469.5
CDS CCA 72 bp CAGCCAAGACTGGATGGTCTGCCTGATTCGAAAAGTTaGGGCGTGCTTTCTCCTTCAACTCTTTCAAAGAAA +
Preference number: 6 (lower is better)
Translates to: QPRLDGLPDSKS*GVLSPSTLSKK
Trigger: TTTCTTTGAAAGAGTTGAAGGAGAAAGCACGCCCCAACTTTTCGAATCAGGCAGACCATCCAGTCTTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS TCA 72 bp GGAACCCTTTGGTTTACACATAGACTGCATAATCACTaGCCTGTAGGAGATACTTTCAAAGGGACACCCATG +
Preference number: 6 (lower is better)
Translates to: GTLWFTHRLHNH*PVGDTFKGTPM
Trigger: CATGGGTGTCCCTTTGAAAGTATCTCCTACAGGTCAGTGATTATGCAGTCTATGTGTAAACCAAAGGGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS GCA 72 bp CAGCTGGGAGATCTAAGTTATATTGTAACCTCTCCATaGCTCAGTTTTCTCACCCTGCCATTTCCTAGCATT +
Preference number: 6 (lower is better)
Translates to: QLGDLSYIVTSP*LSFLTLPFPSI
Trigger: AATGCTAGGAAATGGCAGGGTGAGAAAACTGAGGCATGGAGAGGTTACAATATAACTTAGATCTCCCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446044.5
ENST00000486712.5
ENST00000497283.1
CDS CCA 72 bp ACAGTGCTGTCATATTCACACACACACAAAAATAGTTaGAAGGCCAAAACCCTTGGAACCCTTTGGTTTACA +
Preference number: 6 (lower is better)
Translates to: TVLSYSHTHKNS*KAKTLGTLWFT
Trigger: TGTAAACCAAAGGGTTCCAAGGGTTTTGGCCTTCCAACTATTTTTGTGTGTGTGTGAATATGACAGCACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS CAA 72 bp CACACACACACAAAAATAGTTGGAAGGCCAAAACCCTaGGAACCCTTTGGTTTACACATAGACTGCATAATC +
Preference number: 6 (lower is better)
Translates to: HTHTKIVGRPKP*EPFGLHIDCII
Trigger: GATTATGCAGTCTATGTGTAAACCAAAGGGTTCCAAGGGTTTTGGCCTTCCAACTATTTTTGTGTGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497283.1
CDS CAA 90 bp TGTCATATTCACACACACACAAAAATAGTTGGAAGGCCAAAACCCTaGGAACCCTTTGGTTTACACATAGACTGCATAATCACTGACCTG +
Preference number: 6 (lower is better)
Translates to: CHIHTHTKIVGRPKP*EPFGLHIDCIITDL
Trigger: CAGGTCAGTGATTATGCAGTCTATGTGTAAACCAAAGGGTTCCAAGGGTTTTGGCCTTCCAACTATTTTTGTGTGTGTGTGAATATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497283.1