RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAPKAPK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000162889

Ensembl transcript IDs: ENST00000294981.8, ENST00000367103.4, ENST00000479009.1, ENST00000493447.1

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGTTCCTAAGCCCCAGCAGGGCCGTCTCCCTCTGCAGCCCTGCCTaGCCCTGGCCCCTCAAATGCACGATCCCAGGCACAGATCTGCGC +
Preference number: 1 (lower is better)
Translates to: RFLSPSRAVSLCSPA*PWPLKCTIPGTDLR
Trigger: GCGCAGATCTGTGCCTGGGATCGTGCATTTGAGGGGCCAGGGGCAGGCAGGGCTGCAGAGGGAGACGGCCCTGCTGGGGCTTAGGAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR TCA 90 bp GGCTCCGAGAGAGGAAGTGCGTGGCATCCTCCTCCAAGGTGGCCTTaGGCTCCCAGAACGCGTGAGCCAGCGGGGACAACCCCAGGCTGT +
Preference number: 1 (lower is better)
Translates to: GSERGSAWHPPPRWP*APRTREPAGTTPGC
Trigger: ACAGCCTGGGGTTGTCCCCGCTGGCTCACGCGTTCTGGGAGCTCAAGGCCACCTTGGAGGAGGATGCCACGCACTTCCTCTCTCGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR CCA 90 bp TTCAGAATCTGGGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATaGGCAGGGCAGACCCAAGAAGGGAGAAGGTTCCTAAGCCCCAGC +
Preference number: 1 (lower is better)
Translates to: FRIWVGFPGTLAGSV*AGQTQEGRRFLSPS
Trigger: GCTGGGGCTTAGGAACCTTCTCCCTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR CCA 90 bp CACAGAGGGCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTTaGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAGGGAGAAGGT +
Preference number: 1 (lower is better)
Translates to: HRGPVSESGWASQAL*QAQYGQGRPKKGEG
Trigger: ACCTTCTCCCTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGCCCTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR GCA 90 bp CTGATGCCCCAGAACCCAGGACAAACACAGGAAATGCAAAAGCTCTaGCAACAGAAGCTGCCCAGGCTCACCTACATGAGCTGGGCGGTG +
Preference number: 1 (lower is better)
Translates to: LMPQNPGQTQEMQKL*QQKLPRLTYMSWAV
Trigger: CACCGCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATTTCCTGTGTTTGTCCTGGGTTCTGGGGCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR TCA 90 bp ACACACATACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTaGGGGCTCCGAGAGAGGAAGTGCGTGGCATCCTCCTCCAAGGTG +
Preference number: 1 (lower is better)
Translates to: THIHSLLFVWHTGDV*GLRERKCVASSSKV
Trigger: CACCTTGGAGGAGGATGCCACGCACTTCCTCTCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTATGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR TCA 90 bp CAAGGCAGAATTCAGTCACTGATGCAGTTCCAGGCTCCATGCAGCTaGGGAGGAGAGGAGGCAGATGTGGACAGTTCTGTCTCTTCGTTT +
Preference number: 1 (lower is better)
Translates to: QGRIQSLMQFQAPCS*GGEEADVDSSVSSF
Trigger: AAACGAAGAGACAGAACTGTCCACATCTGCCTCCTCTCCTCCTCAGCTGCATGGAGCCTGGAACTGCATCAGTGACTGAATTCTGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR CCA 90 bp TCTAACAAACCACAAGCCTTTGCAGTATCCAGAGAGGAAGGCGTCTaGTGGAGAGGAGTGGGGCAAGGACAACAAAAGAGGTTTCGTAAA +
Preference number: 1 (lower is better)
Translates to: SNKPQAFAVSREEGV*WRGVGQGQQKRFRK
Trigger: TTTACGAAACCTCTTTTGTTGTCCTTGCCCCACTCCTCTCCACCAGACGCCTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR CCA 90 bp AAGCCTTTGCAGTATCCAGAGAGGAAGGCGTCTGGTGGAGAGGAGTaGGGCAAGGACAACAAAAGAGGTTTCGTAAAAACTCTAAGTCAA +
Preference number: 1 (lower is better)
Translates to: KPLQYPERKASGGEE*GKDNKRGFVKTLSQ
Trigger: TTGACTTAGAGTTTTTACGAAACCTCTTTTGTTGTCCTTGCCCCACTCCTCTCCACCAGACGCCTTCCTCTCTGGATACTGCAAAGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR TCA 90 bp TGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTCCCCAGGCTCACCTACATaGGCTGGGCGGTGGCCCATG +
Preference number: 2 (lower is better)
Translates to: CRHPAPSPIHKDDPGRPSPGSPT*AGRWPM
Trigger: CATGGGCCACCGCCCAGCTCATGTAGGTGAGCCTGG...GGAGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR TCA 90 bp GCTGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTCCTCCAAGGTGGCCTTaGGCTCCCAGAACGCGTGAG +
Preference number: 2 (lower is better)
Translates to: AAGTQRLPPYTKTTLGAPPPRWP*APRTRE
Trigger: CTCACGCGTTCTGGGAGCTCAAGGCCACCTTGGAGG...AGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR TCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTGTTAGTGGTCCACGCTaGCAACGGCAGCCTCACCCC +
Preference number: 2 (lower is better)
Translates to: EPQPPGPELSSASSAAEGVSGPR*QRQPHP
Trigger: GGGGTGAGGCTGCCGTTGTCAGCGTGGACCACTAAC...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR-3UTR CCA 90 bp AGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTCTGGTCATCTCCTCCTaGGGGCACGGCAGCACCAGG +
Preference number: 2 (lower is better)
Translates to: SRSLQGPSFLPPLQQQRVLVISS*GHGSTR
Trigger: CCTGGTGCTGCCGTGCCCCCAGGAGGAGATGACCAG...AACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR-3UTR TCA 90 bp TGTCTGAGGGCTCCGAGAGAGGAAGTGCGTGGCATCCTCCTCCAAGGTGGCCTTAGCTCCCAGAACGCGTaGGCCAGCGGGGACAACCCC +
Preference number: 2 (lower is better)
Translates to: CLRAPREEVRGILLQGGLSSQNA*ASGDNP
Trigger: GGGGTTGTCCCCGCTGGCTCACGCGTTCTGGGAGCT...AAGGCCACCTTGGAGGAGGATGCCACGCACTTCCTCTCTCGGAGCCCTCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR GCA 90 bp GCTGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTCTCCGAGAGAGGAAGTaGGTGGCATCCTCCTCCAAG +
Preference number: 2 (lower is better)
Translates to: AAGTQRLPPYTKTTLGAPLRERK*VASSSK
Trigger: CTTGGAGGAGGATGCCACGCACTTCCTCTCTCGGAG...AGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR GCA 90 bp GCTGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTCCCTGGCCCCTCAAATaGACGATCCCAGGCACAGAT +
Preference number: 2 (lower is better)
Translates to: AAGTQRLPPYTKTTLGAPPWPLK*TIPGTD
Trigger: ATCTGTGCCTGGGATCGTGCATTTGAGGGGCCAGGG...AGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CCA 90 bp AGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGGCAGCAGAGAGCCTaGCTATGGCACTGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: SRSLQGPSFLPPLQQQRVGQQRA*LWHCCC
Trigger: ACAGCAGCAGTGCCATAGCCAGGCTCTCTGCTGCCC...AACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR-3UTR GCA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCGCCTGGCTATGGCACTaGTGCTGTTCCCTGAGAGCC +
Preference number: 2 (lower is better)
Translates to: GWEQREKTGWLVVHADNGAWLWH*CCSLRA
Trigger: GGCTCTCAGGGAACAGCAGCAGTGCCATAGCCAGGC...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR-3UTR CCA 90 bp CACTCCTCTCTGCCTCCCGGAACCCAGCTAATAGAGACAGGCCACAGAGGGCCTCAGCCTCTCCCACTCTaGGGTGGCCAGAACCAAGGC +
Preference number: 2 (lower is better)
Translates to: HSSLPPGTQLIETGHRGPQPLPL*GGQNQG
Trigger: GCCTTGGTTCTGGCCACCCCAGAGTGGGAGAGGCTG...AGGCCCTCTGTGGCCTGTCTCTATTAGCTGGGTTCCGGGAGGCAGAGAGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CCA 90 bp TGCCTGCCCCTGGCCCCTCAAATGCACGATCCCAGGCACAGATCTGCGCACTCAGAGGAAGGCGTCTGGTaGAGAGGAGTGGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: CLPLAPQMHDPRHRSAHSEEGVW*RGVGQG
Trigger: TCCTTGCCCCACTCCTCTCCACCAGACGCCTTCCTC...TGAGTGCGCAGATCTGTGCCTGGGATCGTGCATTTGAGGGGCCAGGGGCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CCA 90 bp GCTGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTGTTTCAGAATCTGGGTaGGCTTCCCAGGCACTTTGG +
Preference number: 2 (lower is better)
Translates to: AAGTQRLPPYTKTTLGAPVSESG*ASQALW
Trigger: CCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAAC...AGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CCA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCCAGAGAGCCTGGCTATaGCACTGCTGCTGTTCCCTG +
Preference number: 2 (lower is better)
Translates to: GWEQREKTGWLVVHADNGQRAWL*HCCCSL
Trigger: CAGGGAACAGCAGCAGTGCCATAGCCAGGCTCTCTG...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR-3UTR CCA 90 bp GGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCTCTGCCTCCCTCTCCCACTCTGGGGTaGCCAGAACCAAGGCAGAAT +
Preference number: 2 (lower is better)
Translates to: GPVFLIAVPVPGHSSLPPSPTLG*PEPRQN
Trigger: ATTCTGCCTTGGTTCTGGCCACCCCAGAGTGGGAGA...GGGAGGCAGAGAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CCA 90 bp GAAGCTGCCCAGGCTCACCTACATGAGCTGGGCGGTGGCCCATGGAGAAATGGCGCTTCCCAGGCACTTTaGCAGGCTCAGTATGGGCAG +
Preference number: 2 (lower is better)
Translates to: EAAQAHLHELGGGPWRNGASQAL*QAQYGQ
Trigger: CTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGC...GCCATTTCTCCATGGGCCACCGCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR CAA 90 bp CCACAGAGGGCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTaGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAGGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: PQRACFRIWVGFPGT*AGSVWAGQTQEGRR
Trigger: CCTTCTCCCTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGCCCTCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CCA 90 bp AGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGATGCAGAGAGAAGACGGGCTaGTTAGTGGTCCACGCTGAC +
Preference number: 2 (lower is better)
Translates to: SLQGPSFLPPLQQQRVGCREKTG*LVVHAD
Trigger: GTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCT...GCATCCAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR-3UTR CCA 90 bp TGCCTGCCCCTGGCCCCTCAAATGCACGATCCCAGGCACAGATCTGCGCACTCAAACCCCAGGCTGTTGTaGAGAAACAGGGAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: CLPLAPQMHDPRHRSAHSNPRLL*RNREGR
Trigger: TCTGCCCTCCCTGTTTCTCCACAACAGCCTGGGGTT...TGAGTGCGCAGATCTGTGCCTGGGATCGTGCATTTGAGGGGCCAGGGGCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR TCA 90 bp GCTGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTGATAAAATTGCAAAATaGGCACAGGTTCAAGAGCAC +
Preference number: 2 (lower is better)
Translates to: AAGTQRLPPYTKTTLGAPDKIAK*AQVQEH
Trigger: GTGCTCTTGAACCTGTGCTCATTTTGCAATTTTATC...AGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CCA 90 bp ACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAGGGAGAAGGTTCCTAAGAGAGGAAGGCGTCTaGTGGAGAGGAGTGGGGCAA +
Preference number: 2 (lower is better)
Translates to: TLAGSVWAGQTQEGRRFLREEGV*WRGVGQ
Trigger: TTGCCCCACTCCTCTCCACCAGACGCCTTCCTCTCT...TAGGAACCTTCTCCCTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR TCA 90 bp CACTCCTCTCTGCCTCCCGGAACCCAGCTAATAGAGACAGGCCACAGAGGGCCTCAGGGACAATCCCTATaGCAGTTTCCACAAATACCC +
Preference number: 2 (lower is better)
Translates to: HSSLPPGTQLIETGHRGPQGQSL*QFPQIP
Trigger: GGGTATTTGTGGAAACTGTCATAGGGATTGTCCCTG...AGGCCCTCTGTGGCCTGTCTCTATTAGCTGGGTTCCGGGAGGCAGAGAGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR TCA 90 bp CAGGAAATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCCACACTGGAGATGTCTaGGGGCTCCGAGAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: QEMQKLCQQKLPRLTYMSHTGDV*GLRERK
Trigger: CTTCCTCTCTCGGAGCCCTCAGACATCTCCAGTGTG...GCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR TCA 90 bp GCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGTGCAAAATGAGAAGATaGTACCAGATGGTCTTTAAG +
Preference number: 2 (lower is better)
Translates to: AAASRARAFFRLFSSRGLCKMRR*YQMVFK
Trigger: CTTAAAGACCATCTGGTATCATCTTCTCATTTTGCA...CAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR-3UTR GCA 90 bp CAGGAAATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCGGTTCAAGAGCACCTTaGTCACTTCTCTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: QEMQKLCQQKLPRLTYMSGSRAP*SLLSTA
Trigger: GGCTGTGGAGAGAAGTGAGCAAGGTGCTCTTGAACC...GCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR GCA 90 bp CAGGAAATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCTCCCAGGCACAGATCTaGGCACTCATACACACGTGT +
Preference number: 2 (lower is better)
Translates to: QEMQKLCQQKLPRLTYMSSQAQI*ALIHTC
Trigger: ACACGTGTGTATGAGTGCGCAGATCTGTGCCTGGGA...GCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR CAA 90 bp CCCTATGACAGTTTCCACAAATACCCTCTAACAAACCACAAGCCTTaGCAGTATCCAGAGAGGAAGGCGTCTGGTGGAGAGGAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PYDSFHKYPLTNHKP*QYPERKASGGEEWG
Trigger: GCCCCACTCCTCTCCACCAGACGCCTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTGTTAGAGGGTATTTGTGGAAACTGTCATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CCA 90 bp CATACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGATCTGGTGGAGAGGAGTaGGGCAAGGACAACAAAAGA +
Preference number: 2 (lower is better)
Translates to: HTLTPICLAHWRCLRAPRSGGEE*GKDNKR
Trigger: TCTTTTGTTGTCCTTGCCCCACTCCTCTCCACCAGA...TCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR TCA 90 bp ACCAGGAAGGGTACAGAGAGAGCCAGAAGACAGGTAGGAGAGACAGCAGAAGAGTCTAAGAAACAGCACTaGGTTTGGACAGGAACACAG +
Preference number: 2 (lower is better)
Translates to: TRKGTERARRQVGETAEESKKQH*VWTGTQ
Trigger: CTGTGTTCCTGTCCAAACTCAGTGCTGTTTCTTAGA...CTCTTCTGCTGTCTCTCCTACCTGTCTTCTGGCTCTCTCTGTACCCTTCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR-3UTR GCA 90 bp CATACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGACAAACCACAAGCCTTTaGAGTATCCAGAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: HTLTPICLAHWRCLRAPRQTTSL*SIQRGR
Trigger: CCTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTG...TCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR TCA 90 bp AAATACCCTCTAACAAACCACAAGCCTTTGCAGTATCCAGAGAGGAAGGCGTCTGCAGAATTCAGTCACTaGTGCAGTTCCAGGCTCCAT +
Preference number: 2 (lower is better)
Translates to: KYPLTNHKPLQYPERKASAEFSH*CSSRLH
Trigger: ATGGAGCCTGGAACTGCATCAGTGACTGAATTCTGC...AGACGCCTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTGTTAGAGGGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR CCA 72 bp TGGTCCACGCTGACAACGGCAGCCTCACCCCAGCGCTaGGCAGCAGAGAGCCTGGCTATGGCACTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: WSTLTTAASPQR*AAESLAMALLL
Trigger: CAGCAGCAGTGCCATAGCCAGGCTCTCTGCTGCCCAGCGCTGGGGTGAGGCTGCCGTTGTCAGCGTGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR GCA 72 bp AAACCTGGGTCCGGTCTGCCCCAACCAGTCACCAGCTaGGTGACCTTGAGCAGACTGCCCTCCGCCTCTGGG +
Preference number: 3 (lower is better)
Translates to: KPGSGLPQPVTS*VTLSRLPSASG
Trigger: CCCAGAGGCGGAGGGCAGTCTGCTCAAGGTCACGCAGCTGGTGACTGGTTGGGGCAGACCGGACCCAGGTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR-3UTR CAA 90 bp GGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCTCTGCCTCCCTCCTGTAGAGAGTTATaGCTTGTCCTCCCGTGGGCA +
Preference number: 3 (lower is better)
Translates to: GPVFLIAVPVPGHSSLPPSCREL*LVLPWA
Trigger: TGCCCACGGGAGGACAAGCAATAACTCTCTACAGGA...GGGAGGCAGAGAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CAA 90 bp TGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTCCTACACTCACTCCTATTaGTCTGGCACACTGGAGATG +
Preference number: 3 (lower is better)
Translates to: CRHPAPSPIHKDDPGRPSYTHSY*SGTLEM
Trigger: CATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTA...GGAGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR CCA 72 bp TGGGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATaGGCAGGGCAGACCCAAGAAGGGAGAAGGTTCCTA +
Preference number: 3 (lower is better)
Translates to: WVGFPGTLAGSV*AGQTQEGRRFL
Trigger: TAGGAACCTTCTCCCTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR CCA 72 bp GAGACAGGCCACAGAGGGCCTGTTTCAGAATCTGGGTaGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGG +
Preference number: 3 (lower is better)
Translates to: ETGHRGPVSESG*ASQALWQAQYG
Trigger: CCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGCCCTCTGTGGCCTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CAA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTGAAACAGCACTGAGTTaGGACAGGAACACAGAATCC +
Preference number: 3 (lower is better)
Translates to: EPQPPGPELSSASSAAEGETALS*DRNTES
Trigger: GGATTCTGTGTTCCTGTCCAAACTCAGTGCTGTTTC...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR-3UTR CAA 90 bp GGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAGGTTCAAGAGCACCTaGCTCACTTCTCTCCACAGC +
Preference number: 3 (lower is better)
Translates to: GGLPRHFGRLSMGRADPRRFKST*LTSLHS
Trigger: GCTGTGGAGAGAAGTGAGCAAGGTGCTCTTGAACCT...TCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CAA 90 bp AATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCTGGGCGACAACCCCAGGCTGTaGTGGAGAAACAGGGAGGGC +
Preference number: 3 (lower is better)
Translates to: NAKALPTEAAQAHLHELGDNPRL*WRNREG
Trigger: GCCCTCCCTGTTTCTCCACAACAGCCTGGGGTTGTC...GCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR CCA 72 bp CCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTTaGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAG +
Preference number: 3 (lower is better)
Translates to: PVSESGWASQAL*QAQYGQGRPKK
Trigger: CTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CAA 90 bp GCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGTAGAGAGTTATTGCTaGTCCTCCCGTGGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: ACFRIWVGFPGTLAGSVWVESYC*SSRGQE
Trigger: CTCCTGCCCACGGGAGGACAAGCAATAACTCTCTAC...CCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR-3UTR CAA 90 bp TGCCTGCCCCTGGCCCCTCAAATGCACGATCCCAGGCACAGATCTGCGCACTCAACAAACCACAAGCCTTaGCAGTATCCAGAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: CLPLAPQMHDPRHRSAHSTNHKP*QYPERK
Trigger: CTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTGT...TGAGTGCGCAGATCTGTGCCTGGGATCGTGCATTTGAGGGGCCAGGGGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR TCA 72 bp CACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTaGGGGCTCCGAGAGAGGAAGTGCGTGGCATCCTCC +
Preference number: 3 (lower is better)
Translates to: HSLLFVWHTGDV*GLRERKCVASS
Trigger: GGAGGATGCCACGCACTTCCTCTCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR TCA 72 bp AGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATaGGCTGGGCGGTGGCCCATGGAGAAATGGCTAAAA +
Preference number: 3 (lower is better)
Translates to: SSANRSCPGSPT*AGRWPMEKWLK
Trigger: TTTTAGCCATTTCTCCATGGGCCACCGCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR CCA 72 bp CACACACATACACTCACTCCTATTTGTCTGGCACACTaGAGATGTCTGAGGGCTCCGAGAGAGGAAGTGCGT +
Preference number: 3 (lower is better)
Translates to: HTHTLTPICLAH*RCLRAPREEVR
Trigger: ACGCACTTCCTCTCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTATGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
3UTR CCA 72 bp TGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCTaGGCGGTGGCCCATGGAGAAATGGCTAAAAATTTA +
Preference number: 3 (lower is better)
Translates to: CQQKLPRLTYMS*AVAHGEMAKNL
Trigger: TAAATTTTTAGCCATTTCTCCATGGGCCACCGCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp TGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTCCGGCGCGGTGGCTCAGTaGGCCAGAGCCGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: CRHPAPSPIHKDDPGRPSGAVAQ*ARAAAS
Trigger: GGAGGCTGCGGCTCTGGCCCACTGAGCCACCGCGCC...GGAGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp GGGGGCTGGGGGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCGCAGCTCCACCTCCCTaGGGGCCTTGGGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GGWGSSLPDRSASARSLLAAPPP*GPWGSP
Trigger: AGGACTGCCCCAAGGCCCGCAGGGAGGTGGAGCTGC...GAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACCCCCAGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGGCACCGGCGGGCTCTaGCCCTGGGAGTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: AAASRARAFFRLFSSRGLGTGGL*PWELDS
Trigger: GCTGTCCAACTCCCAGGGCCAGAGCCCGCCGGTGCC...CAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GGGGGCTGGGGGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCTTGCTTGTCCTCCCGTaGGCAGGAGGGCGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGWGSSLPDRSASARSLLLLVLP*AGGRGG
Trigger: GCCACCGCGCCCTCCTGCCCACGGGAGGACAAGCAA...GAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACCCCCAGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp CAGAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGAGTTGGACAGCATGGTaGCCGGGGACGCCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QSRSLQGPSFLPPLQQQRSWTAW*PGTPGH
Trigger: GTGCCCCGGCGTCCCCGGGCACCATGCTGTCCAACT...CCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp GCTGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTAGACAAGGGAGGCGCTaGAGGCACCCAGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: AAGTQRLPPYTKTTLGAPRQGRR*RHPAPS
Trigger: GGAAGGCGCTGGGTGCCTGCAGCGCCTCCCTTGTCT...AGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GCCAGCGGGGACAACCCCAGGCTGTTGTGGAGAAACAGGGAGGGCAGATGGGACGGGAGTTGGACAGCATaGTGCCCGGGGACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: ASGDNPRLLWRNREGRWDGSWTA*CPGTPG
Trigger: CCCCGGCGTCCCCGGGCACCATGCTGTCCAACTCCC...GTCCCATCTGCCCTCCCTGTTTCTCCACAACAGCCTGGGGTTGTCCCCGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GCCAGCGGGGACAACCCCAGGCTGTTGTGGAGAAACAGGGAGGGCAGATGGGACGGCACCGGCGGGCTCTaGCCCTGGGAGTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: ASGDNPRLLWRNREGRWDGTGGL*PWELDS
Trigger: GCTGTCCAACTCCCAGGGCCAGAGCCCGCCGGTGCC...GTCCCATCTGCCCTCCCTGTTTCTCCACAACAGCCTGGGGTTGTCCCCGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTACGATGTGCGGGCACTaGGAGGCCCGCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EPQPPGPELSSASSAAEGTMCGH*EARQCS
Trigger: GCTGCACTGGCGGGCCTCCCAGTGCCCGCACATCGT...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTGCCTCACCCCAGCGCTaGGCAGCAGAGAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: EPQPPGPELSSASSAAEGASPQR*AAESLA
Trigger: AGCCAGGCTCTCTGCTGCCCAGCGCTGGGGTGAGGC...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp CAGAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGTTGCTTGTCCTCCCGTaGGCAGGAGGGCGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: QSRSLQGPSFLPPLQQQRLLVLP*AGGRGG
Trigger: GCCACCGCGCCCTCCTGCCCACGGGAGGACAAGCAA...CCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp GGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCTCTGCCTCCCAGTTGGACAGCATGGTaGCCGGGGACGCCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GPVFLIAVPVPGHSSLPPSWTAW*PGTPGH
Trigger: GTGCCCCGGCGTCCCCGGGCACCATGCTGTCCAACT...GGGAGGCAGAGAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp TGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTCCGACTTGACGTGGAACTaGGGGAACTGCTGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: CRHPAPSPIHKDDPGRPSDLTWN*GNCCGG
Trigger: GCCCCCGCAGCAGTTCCCGCAGTTCCACGTCAAGTC...GGAGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTACGATCCGTACGATGTaGGGGCACTGGGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: EPQPPGPELSSASSAAEGTIRTM*GHWEAR
Trigger: GCGGGCCTCCCAGTGCCCGCACATCGTACGGATCGT...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCTCTGCCTCCCAAGTTCGCTCCGGGCTaGAGCCGGCTTCCCCGACCC +
Preference number: 4 (lower is better)
Translates to: GPVFLIAVPVPGHSSLPPKFAPG*SRLPRP
Trigger: GGGTCGGGGAAGCCGGCTCCAGCCCGGAGCGAACTT...GGGAGGCAGAGAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCTCTGCCTCCCACGATGTGCGGGCACTaGGAGGCCCGCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GPVFLIAVPVPGHSSLPPTMCGH*EARQCS
Trigger: GCTGCACTGGCGGGCCTCCCAGTGCCCGCACATCGT...GGGAGGCAGAGAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTCTGGTCATCTCCTCCTaGGGGCACGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: EPQPPGPELSSASSAAEGLVISS*GHGSTR
Trigger: CCTGGTGCTGCCGTGCCCCCAGGAGGAGATGACCAG...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp TGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTCCTCTGCAGGCCGGACTTaGCGTGGAACTGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: CRHPAPSPIHKDDPGRPSSAGRT*RGTAGT
Trigger: AGTTCCCGCAGTTCCACGTCAAGTCCGGCCTGCAGA...GGAGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp GGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAGCTCCCAGAACGCGTaGGCCAGCGGGGACAACCCC +
Preference number: 4 (lower is better)
Translates to: GGLPRHFGRLSMGRADPRSSQNA*ASGDNP
Trigger: GGGGTTGTCCCCGCTGGCTCACGCGTTCTGGGAGCT...TCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTGACTTGACGTGGAACTaGGGGAACTGCTGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: EPQPPGPELSSASSAAEGDLTWN*GNCCGG
Trigger: GCCCCCGCAGCAGTTCCCGCAGTTCCACGTCAAGTC...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCGCAGCTCCACCTCCCTaGGGGCCTTGGGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GWEQREKTGWLVVHADNGAAPPP*GPWGSP
Trigger: AGGACTGCCCCAAGGCCCGCAGGGAGGTGGAGCTGC...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp GCCAGCGGGGACAACCCCAGGCTGTTGTGGAGAAACAGGGAGGGCAGATGGGACACGATCCGTACGATGTaGGGGCACTGGGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: ASGDNPRLLWRNREGRWDTIRTM*GHWEAR
Trigger: GCGGGCCTCCCAGTGCCCGCACATCGTACGGATCGT...GTCCCATCTGCCCTCCCTGTTTCTCCACAACAGCCTGGGGTTGTCCCCGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCAAGTTCGCTCCGGGCTaGAGCCGGCTTCCCCGACCC +
Preference number: 4 (lower is better)
Translates to: GWEQREKTGWLVVHADNGKFAPG*SRLPRP
Trigger: GGGTCGGGGAAGCCGGCTCCAGCCCGGAGCGAACTT...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp AGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGCGGGCTCTGGCCCTaGGAGTTGGACAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: SRSLQGPSFLPPLQQQRVGGLWP*ELDSMV
Trigger: CACCATGCTGTCCAACTCCCAGGGCCAGAGCCCGCC...AACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp TGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTCCCCTCCCTGCGGGCCTTaGGGCAGTCCTGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: CRHPAPSPIHKDDPGRPSPPCGP*GSPEAF
Trigger: AAATGCTTCAGGACTGCCCCAAGGCCCGCAGGGAGG...GGAGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGCCTTCAGGACCCGGCTaGTGTGCAGTGGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: AAASRARAFFRLFSSRGLPSGPG*CAVGFE
Trigger: CTCAAACCCCACTGCACACCAGCCGGGTCCTGAAGG...CAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTGGGCAGCAGAGAGCCTaGCTATGGCACTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: EPQPPGPELSSASSAAEGGQQRA*LWHCCC
Trigger: ACAGCAGCAGTGCCATAGCCAGGCTCTCTGCTGCCC...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp GCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGCAAAACTTTGCCGTTaGTGCCCAGCCCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: AAASRARAFFRLFSSRGLAKLCR*CPAPGP
Trigger: AGGTCCTGGGGCTGGGCATCAACGGCAAAGTTTTGC...CAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp CAGAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGCATGAAGACACCCCTTaGCATCCTCCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QSRSLQGPSFLPPLQQQRHEDTP*HPPTAP
Trigger: AGGAGCGGTGGGAGGATGTCAAGGGGTGTCTTCATG...CCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp AGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGCCTGGCTATGGCACTaGTGCTGTTCCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SRSLQGPSFLPPLQQQRVAWLWH*CCSLRA
Trigger: GGCTCTCAGGGAACAGCAGCAGTGCCATAGCCAGGC...AACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTCCGGCTGGTGTGCAGTaGGGTTTGAGGGACCTTTGT +
Preference number: 4 (lower is better)
Translates to: EPQPPGPELSSASSAAEGPAGVQ*GLRDLC
Trigger: ACAAAGGTCCCTCAAACCCCACTGCACACCAGCCGG...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGCCTCTGCTCACAACCTaGTCAGCCAAGTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: AAASRARAFFRLFSSRGLPLLTT*SAKWPG
Trigger: ACCAGGCCACTTGGCTGACCAGGTTGTGAGCAGAGG...CAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp TGCCTGCCCCTGGCCCCTCAAATGCACGATCCCAGGCACAGATCTGCGCACTCACAGCCTCTCCCACTCTaGGGTGGCCAGAACCAAGGC +
Preference number: 4 (lower is better)
Translates to: CLPLAPQMHDPRHRSAHSQPLPL*GGQNQG
Trigger: GCCTTGGTTCTGGCCACCCCAGAGTGGGAGAGGCTG...TGAGTGCGCAGATCTGTGCCTGGGATCGTGCATTTGAGGGGCCAGGGGCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GGGGGCTGGGGGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCAACCCCAGGCTGTTGTaGAGAAACAGGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGWGSSLPDRSASARSLLNPRLL*RNREGR
Trigger: TCTGCCCTCCCTGTTTCTCCACAACAGCCTGGGGTT...GAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACCCCCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GAAGCTGCCCAGGCTCACCTACATGAGCTGGGCGGTGGCCCATGGAGAAATGGCCAAGGGAAGGGGGAGTaGGGGGCCATGGCACAGACA +
Preference number: 4 (lower is better)
Translates to: EAAQAHLHELGGGPWRNGQGKGE*GAMAQT
Trigger: TGTCTGTGCCATGGCCCCCCACTCCCCCTTCCCTTG...GCCATTTCTCCATGGGCCACCGCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCTCTGCAGGCCGGACTTaGCGTGGAACTGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: GWEQREKTGWLVVHADNGSAGRT*RGTAGT
Trigger: AGTTCCCGCAGTTCCACGTCAAGTCCGGCCTGCAGA...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp GCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGCGTTCTTCTTGATCTaGAGGCCGGACTTGACGTGG +
Preference number: 4 (lower is better)
Translates to: AAASRARAFFRLFSSRGLAFFLI*RPDLTW
Trigger: CCACGTCAAGTCCGGCCTGCAGATCAAGAAGAACGC...CAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCAACCTGGGTCCGGTCTaGCCCAACCAGTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GWEQREKTGWLVVHADNGNLGPV*PNQSPA
Trigger: AGCTGGTGACTGGTTGGGGCAGACCGGACCCAGGTT...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp TGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTCCCCTGTAGAGAGTTATTaGTTGTCCTCCCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CRHPAPSPIHKDDPGRPSPVESY*LSSRGQ
Trigger: CTGCCCACGGGAGGACAAGCAATAACTCTCTACAGG...GGAGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp GCCAGCGGGGACAACCCCAGGCTGTTGTGGAGAAACAGGGAGGGCAGATGGGACCCCTGGCCCCTCAAATaGACGATCCCAGGCACAGAT +
Preference number: 4 (lower is better)
Translates to: ASGDNPRLLWRNREGRWDPWPLK*TIPGTD
Trigger: ATCTGTGCCTGGGATCGTGCATTTGAGGGGCCAGGG...GTCCCATCTGCCCTCCCTGTTTCTCCACAACAGCCTGGGGTTGTCCCCGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCAGGCCGGACTTGACGTaGAACTGCGGGAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GWEQREKTGWLVVHADNGRPDLT*NCGNCC
Trigger: GCAGCAGTTCCCGCAGTTCCACGTCAAGTCCGGCCT...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GAAGCTGCCCAGGCTCACCTACATGAGCTGGGCGGTGGCCCATGGAGAAATGGCAGGCCGGACTTGACGTaGAACTGCGGGAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: EAAQAHLHELGGGPWRNGRPDLT*NCGNCC
Trigger: GCAGCAGTTCCCGCAGTTCCACGTCAAGTCCGGCCT...GCCATTTCTCCATGGGCCACCGCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp AGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTTCATGCCCGGAGAGATaGCAAGGCCGTGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SRSLQGPSFLPPLQQQRVSCPER*QGRGWS
Trigger: ACTCCAACCACGGCCTTGCCATCTCTCCGGGCATGA...AACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp TGCCTGCCCCTGGCCCCTCAAATGCACGATCCCAGGCACAGATCTGCGCACTCACCTTCAGGACCCGGCTaGTGTGCAGTGGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: CLPLAPQMHDPRHRSAHSPSGPG*CAVGFE
Trigger: CTCAAACCCCACTGCACACCAGCCGGGTCCTGAAGG...TGAGTGCGCAGATCTGTGCCTGGGATCGTGCATTTGAGGGGCCAGGGGCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp AGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTCAGAGAGCCTGGCTATaGCACTGCTGCTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SRSLQGPSFLPPLQQQRVQRAWL*HCCCSL
Trigger: CAGGGAACAGCAGCAGTGCCATAGCCAGGCTCTCTG...AACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGACCCACAAGGGGTAGCTaGCTGATGCCCCAGAACCCA +
Preference number: 4 (lower is better)
Translates to: GGLPRHFGRLSMGRADPRPTRGS*LMPQNP
Trigger: TGGGTTCTGGGGCATCAGCCAGCTACCCCTTGTGGG...TCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp TGCCTGCCCCTGGCCCCTCAAATGCACGATCCCAGGCACAGATCTGCGCACTCACACACTGGAGATGTCTaGGGGCTCCGAGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CLPLAPQMHDPRHRSAHSHTGDV*GLRERK
Trigger: CTTCCTCTCTCGGAGCCCTCAGACATCTCCAGTGTG...TGAGTGCGCAGATCTGTGCCTGGGATCGTGCATTTGAGGGGCCAGGGGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp GCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGGGGTCCAGTCTTCCTaGTCGCAGTGCCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: ACFRIWVGFPGTLAGSVWGVQSS*SQCQCP
Trigger: CGGGCACTGGCACTGCGATCAGGAAGACTGGACCCC...CCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp AGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGATGCACTGGCCCATTCGGATaGGAGTCTTCATGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: SLQGPSFLPPLQQQRVGCTGPFG*ESSCPE
Trigger: CTCCGGGCATGAAGACTCGCATCCGAATGGGCCAGT...GCATCCAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp CAGAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGCCTGTAGAGAGTTATTaGTTGTCCTCCCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QSRSLQGPSFLPPLQQQRPVESY*LSSRGQ
Trigger: CTGCCCACGGGAGGACAAGCAATAACTCTCTACAGG...CCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp GCTGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTGAAATGCAAAAGCTCTaGCAACAGAAGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AAGTQRLPPYTKTTLGAPEMQKL*QQKLPR
Trigger: CCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATTTC...AGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp GCCACAGAGGGCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTTGGCAGGACAGCCTACCCCAGCTaGTCCTCATCTGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ATEGLFQNLGGLPRHFGRTAYPS*SSSVLG
Trigger: CCCCAGCACAGATGAGGAGCAGCTGGGGTAGGCTGT...CCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGCCCTCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GGGGGCTGGGGGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCGTGATGGTCATTCTCTaGGTGGGCTCTGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: GGWGSSLPDRSASARSLLVMVIL*VGSVFS
Trigger: GCTGAAAACAGAGCCCACCCAGAGAATGACCATCAC...GAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACCCCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GAAGCTGCCCAGGCTCACCTACATGAGCTGGGCGGTGGCCCATGGAGAAATGGCCCGGCTGGTGTGCAGTaGGGTTTGAGGGACCTTTGT +
Preference number: 4 (lower is better)
Translates to: EAAQAHLHELGGGPWRNGPAGVQ*GLRDLC
Trigger: ACAAAGGTCCCTCAAACCCCACTGCACACCAGCCGG...GCCATTTCTCCATGGGCCACCGCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp TGTCTGAGGGCTCCGAGAGAGGAAGTGCGTGGCATCCTCCTCCAAGGTGGCCTTGAGGAAGGCGTCTGGTaGAGAGGAGTGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: CLRAPREEVRGILLQGGLEEGVW*RGVGQG
Trigger: TCCTTGCCCCACTCCTCTCCACCAGACGCCTTCCTC...AAGGCCACCTTGGAGGAGGATGCCACGCACTTCCTCTCTCGGAGCCCTCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp TGTCTGAGGGCTCCGAGAGAGGAAGTGCGTGGCATCCTCCTCCAAGGTGGCCTTGCAAAACTTTGCCGTTaGTGCCCAGCCCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: CLRAPREEVRGILLQGGLAKLCR*CPAPGP
Trigger: AGGTCCTGGGGCTGGGCATCAACGGCAAAGTTTTGC...AAGGCCACCTTGGAGGAGGATGCCACGCACTTCCTCTCTCGGAGCCCTCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTCGTCCAAACATTCCATaGCAATCAGCAGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: EPQPPGPELSSASSAAEGRPNIP*QSAGTS
Trigger: GGAAGTGCCTGCTGATTGTCATGGAATGTTTGGACG...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp ACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAGGGAGAAGGTTCCTACCAGGCTCACCTACATaGGCTGGGCGGTGGCCCATG +
Preference number: 4 (lower is better)
Translates to: TLAGSVWAGQTQEGRRFLPGSPT*AGRWPM
Trigger: CATGGGCCACCGCCCAGCTCATGTAGGTGAGCCTGG...TAGGAACCTTCTCCCTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp TGTCTGAGGGCTCCGAGAGAGGAAGTGCGTGGCATCCTCCTCCAAGGTGGCCTTGGATGCGAGTCTTCATaGCCGGAGAGATGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: CLRAPREEVRGILLQGGLGCESS*PERWQG
Trigger: GCCTTGCCATCTCTCCGGGCATGAAGACTCGCATCC...AAGGCCACCTTGGAGGAGGATGCCACGCACTTCCTCTCTCGGAGCCCTCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GCTGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTCTGACCATTCTGGGTTaGGAAATTCATACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: AAGTQRLPPYTKTTLGAPLTILG*EIHTGP
Trigger: TGGGCCAGTATGAATTTCCCAACCCAGAATGGTCAG...AGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp AGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGATGCACCTGGTCAGCCAAGTaGCCTGGTCGCTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SLQGPSFLPPLQQQRVGCTWSAK*PGRCSC
Trigger: ACAAGAACAGCGACCAGGCCACTTGGCTGACCAGGT...GCATCCAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGATCTCCCACTCTGGGGTaGCCAGAACCAAGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GGLPRHFGRLSMGRADPRSPTLG*PEPRQN
Trigger: ATTCTGCCTTGGTTCTGGCCACCCCAGAGTGGGAGA...TCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp CACTCCTCTCTGCCTCCCGGAACCCAGCTAATAGAGACAGGCCACAGAGGGCCTAGAGAGGAAGGCGTCTaGTGGAGAGGAGTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: HSSLPPGTQLIETGHRGPREEGV*WRGVGQ
Trigger: TTGCCCCACTCCTCTCCACCAGACGCCTTCCTCTCT...AGGCCCTCTGTGGCCTGTCTCTATTAGCTGGGTTCCGGGAGGCAGAGAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GCCAGCGGGGACAACCCCAGGCTGTTGTGGAGAAACAGGGAGGGCAGATGGGACGTTTCAGAATCTGGGTaGGCTTCCCAGGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: ASGDNPRLLWRNREGRWDVSESG*ASQALW
Trigger: CCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAAC...GTCCCATCTGCCCTCCCTGTTTCTCCACAACAGCCTGGGGTTGTCCCCGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTCCTGGGTCCTCTTGTTaGAGATCTGCAAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: EPQPPGPELSSASSAAEGPGSSC*RSAKLC
Trigger: GCAAAGTTTTGCAGATCTTCAACAAGAGGACCCAGG...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp GGCCAGGAGTCAGGAAACCTGGGTCCGGTCTGCCCCAACCAGTCACCAGCTGCGATGCTTCTCTTTCTGTaGATGCCTGGTCTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GQESGNLGPVCPNQSPAAMLLFL*MPGLLD
Trigger: ATCGAGGAGACCAGGCATTCACAGAAAGAGAAGCAT...CGCAGCTGGTGACTGGTTGGGGCAGACCGGACCCAGGTTTCCTGACTCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp GGCCAGGAGTCAGGAAACCTGGGTCCGGTCTGCCCCAACCAGTCACCAGCTGCGCCCGATGGGCAATGTTaGTTGAATGCAGATACTGGA +
Preference number: 4 (lower is better)
Translates to: GQESGNLGPVCPNQSPAAPDGQC*LNADTG
Trigger: TCCAGTATCTGCATTCAATCAACATTGCCCATCGGG...CGCAGCTGGTGACTGGTTGGGGCAGACCGGACCCAGGTTTCCTGACTCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCCAGGCACTTCCTCCCTaGGTACAGATTCTCGTACAC +
Preference number: 4 (lower is better)
Translates to: GWEQREKTGWLVVHADNGQALPP*VQILVH
Trigger: GTGTACGAGAATCTGTACGCAGGGAGGAAGTGCCTG...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp GGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAGGCAGGCACTTCCTCCCTaGGTACAGATTCTCGTACAC +
Preference number: 4 (lower is better)
Translates to: GLPRHFGRLSMGRADPRRQALPP*VQILVH
Trigger: GTGTACGAGAATCTGTACGCAGGGAGGAAGTGCCTG...CCTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp GGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGATCCCAGGCACAGATCTaGGCACTCATACACACGTGT +
Preference number: 4 (lower is better)
Translates to: GGLPRHFGRLSMGRADPRSQAQI*ALIHTC
Trigger: ACACGTGTGTATGAGTGCGCAGATCTGTGCCTGGGA...TCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp CAGAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGAATGCAGATACTGGATaGCCTCACCGATGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QSRSLQGPSFLPPLQQQRNADTG*PHRCSS
Trigger: TGAAGAGCATCGGTGAGGCCATCCAGTATCTGCATT...CCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp CAGAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGGCTTGACATCCCGATaGGCAATGTTGATTGAATGC +
Preference number: 4 (lower is better)
Translates to: QSRSLQGPSFLPPLQQQRGLTSR*AMLIEC
Trigger: GCATTCAATCAACATTGCCCATCGGGATGTCAAGCC...CCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp CAGAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGAAGAGTTGTGGCTGGTaGTTTCCTTGGCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: QSRSLQGPSFLPPLQQQRKSCGW*FPWQSQ
Trigger: TTGGCTTTGCCAAGGAAACCACCAGCCACAACTCTT...CCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp AGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGATGCTGGACCCAGCACTTCTaGAGCCACATAGTACGGTGT +
Preference number: 4 (lower is better)
Translates to: SLQGPSFLPPLQQQRVGCWTQHF*SHIVRC
Trigger: ACACCGTACTATGTGGCTCCAGAAGTGCTGGGTCCA...GCATCCAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp TGCCTGCCCCTGGCCCCTCAAATGCACGATCCCAGGCACAGATCTGCGCACTCATGGACCCAGCACTTCTaGAGCCACATAGTACGGTGT +
Preference number: 4 (lower is better)
Translates to: CLPLAPQMHDPRHRSAHSWTQHF*SHIVRC
Trigger: ACACCGTACTATGTGGCTCCAGAAGTGCTGGGTCCA...TGAGTGCGCAGATCTGTGCCTGGGATCGTGCATTTGAGGGGCCAGGGGCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTCTGACCATTCTGGGTTaGGAAATTCATACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: EPQPPGPELSSASSAAEGLTILG*EIHTGP
Trigger: TGGGCCAGTATGAATTTCCCAACCCAGAATGGTCAG...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp CACTCCTCTCTGCCTCCCGGAACCCAGCTAATAGAGACAGGCCACAGAGGGCCTGCCTGTTTCAGAATCTaGGTGGGCTTCCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: HSSLPPGTQLIETGHRGPACFRI*VGFPGT
Trigger: AGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGC...AGGCCCTCTGTGGCCTGTCTCTATTAGCTGGGTTCCGGGAGGCAGAGAGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTCACCGATGCTCTTCATaGTTTCGGATGCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: EPQPPGPELSSASSAAEGHRCSS*FRMLLF
Trigger: AAAGAGAAGCATCCGAAATCATGAAGAGCATCGGTG...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp TGTCTGAGGGCTCCGAGAGAGGAAGTGCGTGGCATCCTCCTCCAAGGTGGCCTTGTGTGCAGTGGGGTTTaGGGGACCTTTGTTGATTGC +
Preference number: 4 (lower is better)
Translates to: CLRAPREEVRGILLQGGLVCSGV*GTFVDC
Trigger: GCAATCAACAAAGGTCCCTCAAACCCCACTGCACAC...AAGGCCACCTTGGAGGAGGATGCCACGCACTTCCTCTCTCGGAGCCCTCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp GCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGTCTAAGAAACAGCACTaGGTTTGGACAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: AAASRARAFFRLFSSRGLSKKQH*VWTGTQ
Trigger: CTGTGTTCCTGTCCAAACTCAGTGCTGTTTCTTAGA...CAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp ACCAGGAAGGGTACAGAGAGAGCCAGAAGACAGGTAGGAGAGACAGCAGAAGAGGTTAGTGGTCCACGCTaGCAACGGCAGCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: TRKGTERARRQVGETAEEVSGPR*QRQPHP
Trigger: GGGGTGAGGCTGCCGTTGTCAGCGTGGACCACTAAC...CTCTTCTGCTGTCTCTCCTACCTGTCTTCTGGCTCTCTCTGTACCCTTCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp GGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAGGGCAGAATTCAGTCACTaGTGCAGTTCCAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GLPRHFGRLSMGRADPRRAEFSH*CSSRLH
Trigger: ATGGAGCCTGGAACTGCATCAGTGACTGAATTCTGC...CCTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp CAGGAAATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCCCTCCAAGGTGGCCTTaGGCTCCCAGAACGCGTGAG +
Preference number: 4 (lower is better)
Translates to: QEMQKLCQQKLPRLTYMSPPRWP*APRTRE
Trigger: CTCACGCGTTCTGGGAGCTCAAGGCCACCTTGGAGG...GCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCGAACACAGAATCCTCTaGTCACAACCTGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GWEQREKTGWLVVHADNGEHRIL*SQPGQP
Trigger: TGGCTGACCAGGTTGTGAGCAGAGGATTCTGTGTTC...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp AGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTTGGTCTCCTCGATCCTaGATTCGGCTAAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SRSLQGPSFLPPLQQQRVWSPRS*IRLKSS
Trigger: AGAACTCTTTAGCCGAATCCAGGATCGAGGAGACCA...AACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp AGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTATTGAATGCAGATACTaGATGGCCTCACCGATGCTC +
Preference number: 4 (lower is better)
Translates to: SRSLQGPSFLPPLQQQRVIECRY*MASPML
Trigger: GAGCATCGGTGAGGCCATCCAGTATCTGCATTCAAT...AACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCTCTGCCTCCCGGCTTGACATCCCGATaGGCAATGTTGATTGAATGC +
Preference number: 4 (lower is better)
Translates to: GPVFLIAVPVPGHSSLPPGLTSR*AMLIEC
Trigger: GCATTCAATCAACATTGCCCATCGGGATGTCAAGCC...GGGAGGCAGAGAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp AGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTTCAAAGAGTTGTGGCTaGTGGTTTCCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SRSLQGPSFLPPLQQQRVSKSCG*WFPWQS
Trigger: GCTTTGCCAAGGAAACCACCAGCCACAACTCTTTGA...AACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAGTGGTCAAAGAGTTGTaGCTGGTGGTTTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GGLPRHFGRLSMGRADPRVVKEL*LVVSLA
Trigger: TGCCAAGGAAACCACCAGCCACAACTCTTTGACCAC...TCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTGTGTATAACAAGGAGTaGTCAAAGAGTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EPQPPGPELSSASSAAEGVYNKE*SKSCGW
Trigger: CCAGCCACAACTCTTTGACCACTCCTTGTTATACAC...ACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp AGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTTTGGGAAATTCATACTaGCCCATTCGGATGCGAGTC +
Preference number: 4 (lower is better)
Translates to: SRSLQGPSFLPPLQQQRVLGNSY*PIRMRV
Trigger: GACTCGCATCCGAATGGGCCAGTATGAATTTCCCAA...AACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR CAA 72 bp GCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTaGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAA +
Preference number: 4 (lower is better)
Translates to: ACFRIWVGFPGT*AGSVWAGQTQE
Trigger: TTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp GGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAATGCTTCTCTTTCTGTaGATGCCTGGTCTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GGLPRHFGRLSMGRADPRMLLFL*MPGLLD
Trigger: ATCGAGGAGACCAGGCATTCACAGAAAGAGAAGCAT...TCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp AATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCTGGGCTGGTCATCTCCTCCTTaGCATCCTCCCACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: NAKALPTEAAQAHLHELGWSSPP*HPPTAP
Trigger: AGGAGCGGTGGGAGGATGTCAAGGAGGAGATGACCA...GCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp TACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGAGACAAGGGGTAGCTGGCTaGTGCCCCAGAACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: YTHSYLSGTLEMSEGSERQGVAG*CPRTQD
Trigger: GTCCTGGGTTCTGGGGCATCAGCCAGCTACCCCTTG...TCTCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp AGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGATGCTTCTCTTTCTGTGAATaGCTGGTCTCCTCGATCCTG +
Preference number: 4 (lower is better)
Translates to: SLQGPSFLPPLQQQRVGCFSFCE*LVSSIL
Trigger: CAGGATCGAGGAGACCAGGCATTCACAGAAAGAGAA...GCATCCAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGATGGTCTCCTCGATCCTaGATTCGGCTAAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: GGLPRHFGRLSMGRADPRWSPRS*IRLKSS
Trigger: AGAACTCTTTAGCCGAATCCAGGATCGAGGAGACCA...TCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCTCTGCCTCCCTGGCGTTGGGCCTTTTaGAGGTGTATAAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: GPVFLIAVPVPGHSSLPPWRWAF*RCIRDS
Trigger: AGAATCTCTTATACACCTCCAAAAGGCCCAACGCCA...GGGAGGCAGAGAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCTGGTCATTCTCTGGGTaGGCTCTGTTTTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: GWEQREKTGWLVVHADNGWSFSG*ALFSAD
Trigger: ATCTGCTGAAAACAGAGCCCACCCAGAGAATGACCA...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GCCACAGAGGGCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTTGGCAGGTCTGGTGGAGAGGAGTaGGGCAAGGACAACAAAAGA +
Preference number: 4 (lower is better)
Translates to: ATEGLFQNLGGLPRHFGRSGGEE*GKDNKR
Trigger: TCTTTTGTTGTCCTTGCCCCACTCCTCTCCACCAGA...CCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGCCCTCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp ACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAGGGAGAAGGTTCCTAGAGAGAGGAAGTGCGTaGCATCCTCCTCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TLAGSVWAGQTQEGRRFLERGSA*HPPPRW
Trigger: CCACCTTGGAGGAGGATGCCACGCACTTCCTCTCTC...TAGGAACCTTCTCCCTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp TACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGAGAAGCCCTGCCTGCCCCTaGCCCCTCAAATGCACGATC +
Preference number: 4 (lower is better)
Translates to: YTHSYLSGTLEMSEGSERSPACP*PLKCTI
Trigger: GATCGTGCATTTGAGGGGCCAGGGGCAGGCAGGGCT...TCTCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp AATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCTGGGCGCTTCCCAGGCACTTTaGCAGGCTCAGTATGGGCAG +
Preference number: 4 (lower is better)
Translates to: NAKALPTEAAQAHLHELGASQAL*QAQYGQ
Trigger: CTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGC...GCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp AATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCTGGGCCTCACCTACATGAGCTaGGCGGTGGCCCATGGAGAA +
Preference number: 4 (lower is better)
Translates to: NAKALPTEAAQAHLHELGLTYMS*AVAHGE
Trigger: TTCTCCATGGGCCACCGCCCAGCTCATGTAGGTGAG...GCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp CACTCCTCTCTGCCTCCCGGAACCCAGCTAATAGAGACAGGCCACAGAGGGCCTCCCGATGGGCAATGTTaGTTGAATGCAGATACTGGA +
Preference number: 4 (lower is better)
Translates to: HSSLPPGTQLIETGHRGPPDGQC*LNADTG
Trigger: TCCAGTATCTGCATTCAATCAACATTGCCCATCGGG...AGGCCCTCTGTGGCCTGTCTCTATTAGCTGGGTTCCGGGAGGCAGAGAGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp GCCACAGAGGGCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTTGGCAGGCAGGGACAATCCCTATaGCAGTTTCCACAAATACCC +
Preference number: 4 (lower is better)
Translates to: ATEGLFQNLGGLPRHFGRQGQSL*QFPQIP
Trigger: GGGTATTTGTGGAAACTGTCATAGGGATTGTCCCTG...CCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGCCCTCTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp CAGAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGCTTCATGATTTCGGATaGTTCTCTTTCTGTGAATGC +
Preference number: 4 (lower is better)
Translates to: QSRSLQGPSFLPPLQQQRLHDFG*FSFCEC
Trigger: GCATTCACAGAAAGAGAAGCATCCGAAATCATGAAG...CCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp ACCAGGAAGGGTACAGAGAGAGCCAGAAGACAGGTAGGAGAGACAGCAGAAGAGGGATGCGAGTCTTCATaGCCGGAGAGATGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TRKGTERARRQVGETAEEGCESS*PERWQG
Trigger: GCCTTGCCATCTCTCCGGGCATGAAGACTCGCATCC...CTCTTCTGCTGTCTCTCCTACCTGTCTTCTGGCTCTCTCTGTACCCTTCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GCCACAGAGGGCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTTGGCAGGATTGAATGCAGATACTaGATGGCCTCACCGATGCTC +
Preference number: 4 (lower is better)
Translates to: ATEGLFQNLGGLPRHFGRIECRY*MASPML
Trigger: GAGCATCGGTGAGGCCATCCAGTATCTGCATTCAAT...CCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGCCCTCTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCTGGCGTTGGGCCTTTTaGAGGTGTATAAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: GWEQREKTGWLVVHADNGWRWAF*RCIRDS
Trigger: AGAATCTCTTATACACCTCCAAAAGGCCCAACGCCA...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAGGGTGTATAACAAGGAGTaGTCAAAGAGTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLPRHFGRLSMGRADPRRVYNKE*SKSCGW
Trigger: CCAGCCACAACTCTTTGACCACTCCTTGTTATACAC...CCTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGAGGCGCGGTGGCTCAGTaGGCCAGAGCCGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGGAVAQ*ARAAAS
Trigger: GGAGGCTGCGGCTCTGGCCCACTGAGCCACCGCGCC...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp GGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCTCTGCCTCCCCTCTTGTTGAAGATCTaGAAAACTTTGCCGTTGATG +
Preference number: 4 (lower is better)
Translates to: GPVFLIAVPVPGHSSLPPLLLKI*KTLPLM
Trigger: CATCAACGGCAAAGTTTTGCAGATCTTCAACAAGAG...GGGAGGCAGAGAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp CATACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGACTCCGAGAGAGGAAGTaGGTGGCATCCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: HTLTPICLAHWRCLRAPRLRERK*VASSSK
Trigger: CTTGGAGGAGGATGCCACGCACTTCCTCTCTCGGAG...TCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGAGGGAGTTGGACAGCATaGTGCCCGGGGACGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGGSWTA*CPGTPG
Trigger: CCCCGGCGTCCCCGGGCACCATGCTGTCCAACTCCC...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp GGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGATCAGCAGCAGAGGGTTaGATGCATCTTCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: GGLPRHFGRLSMGRADPRSAAEG*MHLQSF
Trigger: AAAAGATTGAAGATGCATCCAACCCTCTGCTGCTGA...TCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp CACTCCTCTCTGCCTCCCGGAACCCAGCTAATAGAGACAGGCCACAGAGGGCCTACAACAATCGAGTGCTaGACACACCATCTGAGACAA +
Preference number: 4 (lower is better)
Translates to: HSSLPPGTQLIETGHRGPTTIEC*THHLRQ
Trigger: TTGTCTCAGATGGTGTGTCCAGCACTCGATTGTTGT...AGGCCCTCTGTGGCCTGTCTCTATTAGCTGGGTTCCGGGAGGCAGAGAGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp AATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCTGGGCCGTCCAAACATTCCATaGCAATCAGCAGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: NAKALPTEAAQAHLHELGRPNIP*QSAGTS
Trigger: GGAAGTGCCTGCTGATTGTCATGGAATGTTTGGACG...GCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp ACCAGGAAGGGTACAGAGAGAGCCAGAAGACAGGTAGGAGAGACAGCAGAAGAGGTGTGCAGTGGGGTTTaGGGGACCTTTGTTGATTGC +
Preference number: 4 (lower is better)
Translates to: TRKGTERARRQVGETAEEVCSGV*GTFVDC
Trigger: GCAATCAACAAAGGTCCCTCAAACCCCACTGCACAC...CTCTTCTGCTGTCTCTCCTACCTGTCTTCTGGCTCTCTCTGTACCCTTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp AAATACCCTCTAACAAACCACAAGCCTTTGCAGTATCCAGAGAGGAAGGCGTCTCACCGGCCCCGAAGCTaGGTTGTTTGGGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: KYPLTNHKPLQYPERKASHRPRS*VVWGDG
Trigger: GCCATCACCCCAAACAACTCAGCTTCGGGGCCGGTG...AGACGCCTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTGTTAGAGGGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCCTCTTGTTGAAGATCTaGAAAACTTTGCCGTTGATG +
Preference number: 4 (lower is better)
Translates to: GWEQREKTGWLVVHADNGLLLKI*KTLPLM
Trigger: CATCAACGGCAAAGTTTTGCAGATCTTCAACAAGAG...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp CACTCCTCTCTGCCTCCCGGAACCCAGCTAATAGAGACAGGCCACAGAGGGCCTTTTACAACAATCGAGTaGTGGACACACCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: HSSLPPGTQLIETGHRGPFTTIE*WTHHLR
Trigger: TCTCAGATGGTGTGTCCAGCACTCGATTGTTGTAAA...AGGCCCTCTGTGGCCTGTCTCTATTAGCTGGGTTCCGGGAGGCAGAGAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp GCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGAATGCAGATACTGGATaGCCTCACCGATGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ACFRIWVGFPGTLAGSVWNADTG*PHRCSS
Trigger: TGAAGAGCATCGGTGAGGCCATCCAGTATCTGCATT...CCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp CATACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGATTGGCAGGCTCAGTATaGGCAGGGCAGACCCAAGAA +
Preference number: 4 (lower is better)
Translates to: HTLTPICLAHWRCLRAPRLAGSV*AGQTQE
Trigger: TTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAA...TCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp AGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGATGCTGCAAAATGAGAAGATaGTACCAGATGGTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: SLQGPSFLPPLQQQRVGCCKMRR*YQMVFK
Trigger: CTTAAAGACCATCTGGTATCATCTTCTCATTTTGCA...GCATCCAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp GCCACAGAGGGCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTTGGCAGGGATAAAATTGCAAAATaGGCACAGGTTCAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: ATEGLFQNLGGLPRHFGRDKIAK*AQVQEH
Trigger: GTGCTCTTGAACCTGTGCTCATTTTGCAATTTTATC...CCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGCCCTCTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp CACTCCTCTCTGCCTCCCGGAACCCAGCTAATAGAGACAGGCCACAGAGGGCCTCTTCATGATTTCGGATaGTTCTCTTTCTGTGAATGC +
Preference number: 4 (lower is better)
Translates to: HSSLPPGTQLIETGHRGPLHDFG*FSFCEC
Trigger: GCATTCACAGAAAGAGAAGCATCCGAAATCATGAAG...AGGCCCTCTGTGGCCTGTCTCTATTAGCTGGGTTCCGGGAGGCAGAGAGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp AATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCTGGGCTGGTCATTCTCTGGGTaGGCTCTGTTTTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: NAKALPTEAAQAHLHELGWSFSG*ALFSAD
Trigger: ATCTGCTGAAAACAGAGCCCACCCAGAGAATGACCA...GCCCAGCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp GCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGGCAATGTTGATTGAATaGAGATACTGGATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ACFRIWVGFPGTLAGSVWAMLIE*RYWMAS
Trigger: TGAGGCCATCCAGTATCTGCATTCAATCAACATTGC...CCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp AAATACCCTCTAACAAACCACAAGCCTTTGCAGTATCCAGAGAGGAAGGCGTCTACTGGCCCATTCGGATaGGAGTCTTCATGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: KYPLTNHKPLQYPERKASTGPFG*ESSCPE
Trigger: CTCCGGGCATGAAGACTCGCATCCGAATGGGCCAGT...AGACGCCTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTGTTAGAGGGTATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp TACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGAGACATTCAGTAGATGAGTaGCTCAGAGGACCTAGGACC +
Preference number: 4 (lower is better)
Translates to: YTHSYLSGTLEMSEGSERHSVDE*LRGPRT
Trigger: GGTCCTAGGTCCTCTGAGGCACTCATCTACTGAATG...TCTCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp CAGGAAATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCTTGGGAAATTCATACTaGCCCATTCGGATGCGAGTC +
Preference number: 4 (lower is better)
Translates to: QEMQKLCQQKLPRLTYMSLGNSY*PIRMRV
Trigger: GACTCGCATCCGAATGGGCCAGTATGAATTTCCCAA...GCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp CAGGAAATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCCACCGATGCTCTTCATaGTTTCGGATGCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QEMQKLCQQKLPRLTYMSHRCSS*FRMLLF
Trigger: AAAGAGAAGCATCCGAAATCATGAAGAGCATCGGTG...GCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp CATACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGATTCTCTTTCTGTGAATaGCTGGTCTCCTCGATCCTG +
Preference number: 4 (lower is better)
Translates to: HTLTPICLAHWRCLRAPRFSFCE*LVSSIL
Trigger: CAGGATCGAGGAGACCAGGCATTCACAGAAAGAGAA...TCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGACCTCCCTGCGGGCCTTaGGGCAGTCCTGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGPPCGP*GSPEAF
Trigger: AAATGCTTCAGGACTGCCCCAAGGCCCGCAGGGAGG...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp TACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGAGAAAGAGTTGTGGCTGGTaGTTTCCTTGGCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: YTHSYLSGTLEMSEGSERKSCGW*FPWQSQ
Trigger: TTGGCTTTGCCAAGGAAACCACCAGCCACAACTCTT...TCTCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp CATACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGATCAAAGAGTTGTGGCTaGTGGTTTCCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: HTLTPICLAHWRCLRAPRSKSCG*WFPWQS
Trigger: GCTTTGCCAAGGAAACCACCAGCCACAACTCTTTGA...TCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR GCA 90 bp ACCAGGAAGGGTACAGAGAGAGCCAGAAGACAGGTAGGAGAGACAGCAGAAGAGGCAATGTTGATTGAATaGAGATACTGGATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TRKGTERARRQVGETAEEAMLIE*RYWMAS
Trigger: TGAGGCCATCCAGTATCTGCATTCAATCAACATTGC...CTCTTCTGCTGTCTCTCCTACCTGTCTTCTGGCTCTCTCTGTACCCTTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
3UTR CAA 72 bp ATAAAATTGCAAAATGAGCACAGGTTCAAGAGCACCTaGCTCACTTCTCTCCACAGCCTCCCAACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: IKLQNEHRFKST*LTSLHSLPTSQ
Trigger: CTGGGAGGTTGGGAGGCTGTGGAGAGAAGTGAGCAAGGTGCTCTTGAACCTGTGCTCATTTTGCAATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR TCA 90 bp TATGACAGTTTCCACAAATACCCTCTAACAAACCACAAGCCTTTGCAGTATCCATGCAAAGACTCCCCCTaGCCCACCAGGCCACACAAT +
Preference number: 4 (lower is better)
Translates to: YDSFHKYPLTNHKPLQYPCKDSP*PTRPHN
Trigger: ATTGTGTGGCCTGGTGGGTCAGGGGGAGTCTTTGCA...TGGATACTGCAAAGGCTTGTGGTTTGTTAGAGGGTATTTGTGGAAACTGTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp TATGACAGTTTCCACAAATACCCTCTAACAAACCACAAGCCTTTGCAGTATCCATCATGCCCGGAGAGATaGCAAGGCCGTGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: YDSFHKYPLTNHKPLQYPSCPER*QGRGWS
Trigger: ACTCCAACCACGGCCTTGCCATCTCTCCGGGCATGA...TGGATACTGCAAAGGCTTGTGGTTTGTTAGAGGGTATTTGTGGAAACTGTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGAAGAGAGAAGACGGGCTaGTTAGTGGTCCACGCTGAC +
Preference number: 4 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGREKTG*LVVHAD
Trigger: GTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCT...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR GCA 90 bp AAATACCCTCTAACAAACCACAAGCCTTTGCAGTATCCAGAGAGGAAGGCGTCTCAAACCACAAGCCTTTaGAGTATCCAGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: KYPLTNHKPLQYPERKASQTTSL*SIQRGR
Trigger: CCTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTG...AGACGCCTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTGTTAGAGGGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGAGTGGTCAAAGAGTTGTaGCTGGTGGTTTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGVVKEL*LVVSLA
Trigger: TGCCAAGGAAACCACCAGCCACAACTCTTTGACCAC...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CCA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGAGTGATGGTCATTCTCTaGGTGGGCTCTGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGVMVIL*VGSVFS
Trigger: GCTGAAAACAGAGCCCACCCAGAGAATGACCATCAC...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGATCAGCAGATTCCGAATaGGCATCTTCACTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGSADSE*ASSLPL
Trigger: CAGAGGAAGTGAAGATGCTCATTCGGAATCTGCTGA...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR TCA 90 bp TATGACAGTTTCCACAAATACCCTCTAACAAACCACAAGCCTTTGCAGTATCCATCAGCAGATTCCGAATaGGCATCTTCACTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: YDSFHKYPLTNHKPLQYPSADSE*ASSLPL
Trigger: CAGAGGAAGTGAAGATGCTCATTCGGAATCTGCTGA...TGGATACTGCAAAGGCTTGTGGTTTGTTAGAGGGTATTTGTGGAAACTGTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CCA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGATCAGCAGCAGAGGGTTaGATGCATCTTCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGSAAEG*MHLQSF
Trigger: AAAAGATTGAAGATGCATCCAACCCTCTGCTGCTGA...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp AGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTCTCTGGCCCTGGGAGTaGGACAGCATGGTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: SRSLQGPSFLPPLQQQRVLWPWE*DSMVPG
Trigger: CCCGGGCACCATGCTGTCCAACTCCCAGGGCCAGAG...AACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp CAGAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGATCTGCAGGCCGGACTaGACGTGGAACTGCGGGAAC +
Preference number: 5 (lower is better)
Translates to: QSRSLQGPSFLPPLQQQRICRPD*TWNCGN
Trigger: GTTCCCGCAGTTCCACGTCAAGTCCGGCCTGCAGAT...CCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS CCA 90 bp CCAGGTTCAAAGAGGGGGTGCATGGAGGCAGGCTGCCGGAGCAACTaGCCCCAAGGACCATTACGGCTGTACCACTTGAGAGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: PGSKRGCMEAGCRSN*PQGPLRLYHLRGPA
Trigger: TGCAGGGCCTCTCAAGTGGTACAGCCGTAATGGTCCTTGGGGCCAGTTGCTCCGGCAGCCTGCCTCCATGCACCCCCTCTTTGAACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479009.1
CDS-3UTR CAA 90 bp GCTGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTAAGATCTGCAAAACTTaGCCGTTGATGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: AAGTQRLPPYTKTTLGAPKICKT*PLMPSP
Trigger: GGGGCTGGGCATCAACGGCAAAGTTTTGCAGATCTT...AGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp TGCAGGCACCCAGCGCCTTCCCCCATACACAAAGACGACCCTGGGCGCCCCTCCTGGCTGGTGGTTTCCTaGGCAAAGCCAAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: CRHPAPSPIHKDDPGRPSWLVVS*AKPKSV
Trigger: CACTGACTTTGGCTTTGCCAAGGAAACCACCAGCCA...GGAGGGGCGCCCAGGGTCGTCTTTGTGTATGGGGGAAGGCGCTGGGTGCCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp GCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGTAGAGAGTTATTGCTaGTCCTCCCGTGGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: AAASRARAFFRLFSSRGLVESYC*SSRGQE
Trigger: CTCCTGCCCACGGGAGGACAAGCAATAACTCTCTAC...CAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp ACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAGGGAGAAGGTTCCTACTCTGGCCCTGGGAGTaGGACAGCATGGTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: TLAGSVWAGQTQEGRRFLLWPWE*DSMVPG
Trigger: CCCGGGCACCATGCTGTCCAACTCCCAGGGCCAGAG...TAGGAACCTTCTCCCTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp CAGAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGAAGATCTGCAAAACTTaGCCGTTGATGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: QSRSLQGPSFLPPLQQQRKICKT*PLMPSP
Trigger: GGGGCTGGGCATCAACGGCAAAGTTTTGCAGATCTT...CCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp GGGGGCTGGGGGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCAGTTTCAGGATGGCGTaGGGCCTTTTGGAGGTGTAT +
Preference number: 5 (lower is better)
Translates to: GGWGSSLPDRSASARSLLSFRMA*GLLEVY
Trigger: ATACACCTCCAAAAGGCCCAACGCCATCCTGAAACT...GAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACCCCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp GGGGGCTGGGGGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCTCTGACCATTCTGGGTaGGGAAATTCATACTGGCCC +
Preference number: 5 (lower is better)
Translates to: GGWGSSLPDRSASARSLLSDHSG*GNSYWP
Trigger: GGGCCAGTATGAATTTCCCAACCCAGAATGGTCAGA...GAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACCCCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp CAGAGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGTCCCGATGGGCAATGTaGATTGAATGCAGATACTGG +
Preference number: 5 (lower is better)
Translates to: QSRSLQGPSFLPPLQQQRSRWAM*IECRYW
Trigger: CCAGTATCTGCATTCAATCAACATTGCCCATCGGGA...CCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp GGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCTCTGCCTCCCAAGAGATTCTCAGGCTaGACATCCCGATGGGCAATG +
Preference number: 5 (lower is better)
Translates to: GPVFLIAVPVPGHSSLPPKRFSG*TSRWAM
Trigger: CATTGCCCATCGGGATGTCAAGCCTGAGAATCTCTT...GGGAGGCAGAGAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp GCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGATGGCGTTGGGCCTTTaGGAGGTGTATAAGAGATTC +
Preference number: 5 (lower is better)
Translates to: AAASRARAFFRLFSSRGLMALGL*EVYKRF
Trigger: GAATCTCTTATACACCTCCAAAAGGCCCAACGCCAT...CAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp AGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGATGCTCCTGTAGAGAGTTATaGCTTGTCCTCCCGTGGGCA +
Preference number: 5 (lower is better)
Translates to: SLQGPSFLPPLQQQRVGCSCREL*LVLPWA
Trigger: TGCCCACGGGAGGACAAGCAATAACTCTCTACAGGA...GCATCCAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS TCA 90 bp CCAAGTGGCCTGGTCGCTGTTCTTGTCATGAAGACACCCCTGGGATaGGAGAGGCAGAATCAAGCTCTCCCCTACCAGCACCACGCCTCA +
Preference number: 5 (lower is better)
Translates to: PSGLVAVLVMKTPLG*ERQNQALPYQHHAS
Trigger: TGAGGCGTGGTGCTGGTAGGGGAGAGCTTGATTCTGCCTCTCTCATCCCAGGGGTGTCTTCATGACAAGAACAGCGACCAGGCCACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479009.1
CDS-3UTR CAA 90 bp GGGTGGGAGCAGAGAGAGAAGACGGGCTGGTTAGTGGTCCACGCTGACAACGGCTCTGACCATTCTGGGTaGGGAAATTCATACTGGCCC +
Preference number: 5 (lower is better)
Translates to: GWEQREKTGWLVVHADNGSDHSG*GNSYWP
Trigger: GGGCCAGTATGAATTTCCCAACCCAGAATGGTCAGA...GCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCTCTGCTCCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS TCA 90 bp GCTCACAACCTGGTCAGCCAAGTGGCCTGGTCGCTGTTCTTGTCATaGAGACACCCCTGGGATGAGAGAGGCAGAATCAAGCTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: AHNLVSQVAWSLFLS*RHPWDERGRIKLSP
Trigger: AGGGGAGAGCTTGATTCTGCCTCTCTCATCCCAGGGGTGTCTTCATGACAAGAACAGCGACCAGGCCACTTGGCTGACCAGGTTGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479009.1
CDS-3UTR CAA 90 bp GGTCCAGTCTTCCTGATCGCAGTGCCAGTGCCCGGTCACTCCTCTCTGCCTCCCTCCTGGGTCCTCTTGTaGAAGATCTGCAAAACTTTG +
Preference number: 5 (lower is better)
Translates to: GPVFLIAVPVPGHSSLPPSWVLL*KICKTL
Trigger: CAAAGTTTTGCAGATCTTCAACAAGAGGACCCAGGA...GGGAGGCAGAGAGGAGTGACCGGGCACTGGCACTGCGATCAGGAAGACTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp AGCCGCAGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTTTCTCCTGGGTCCTCTaGTTGAAGATCTGCAAAACT +
Preference number: 5 (lower is better)
Translates to: SRSLQGPSFLPPLQQQRVFSWVL*LKICKT
Trigger: AGTTTTGCAGATCTTCAACAAGAGGACCCAGGAGAA...AACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCTGCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp AGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGATGCGAAACAGCACTGAGTTaGGACAGGAACACAGAATCC +
Preference number: 5 (lower is better)
Translates to: SLQGPSFLPPLQQQRVGCETALS*DRNTES
Trigger: GGATTCTGTGTTCCTGTCCAAACTCAGTGCTGTTTC...GCATCCAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp TACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGAGAATCTGCAGGCCGGACTaGACGTGGAACTGCGGGAAC +
Preference number: 5 (lower is better)
Translates to: YTHSYLSGTLEMSEGSERICRPD*TWNCGN
Trigger: GTTCCCGCAGTTCCACGTCAAGTCCGGCCTGCAGAT...TCTCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp AGCCTCCAGGGCCCGAGCTTTCTTCCGCCTCTTCAGCAGCAGAGGGTTGGATGCTTCAGCAGCAGAGGGTaGGATGCATCTTCAATCTTT +
Preference number: 5 (lower is better)
Translates to: SLQGPSFLPPLQQQRVGCFSSRG*DASSIF
Trigger: AAAGATTGAAGATGCATCCAACCCTCTGCTGCTGAA...GCATCCAACCCTCTGCTGCTGAAGAGGCGGAAGAAAGCTCGGGCCCTGGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp TGTCTGAGGGCTCCGAGAGAGGAAGTGCGTGGCATCCTCCTCCAAGGTGGCCTTACAAACCACAAGCCTTaGCAGTATCCAGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: CLRAPREEVRGILLQGGLTNHKP*QYPERK
Trigger: CTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTGT...AAGGCCACCTTGGAGGAGGATGCCACGCACTTCCTCTCTCGGAGCCCTCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp CATACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGAGACAACCCCAGGCTGTaGTGGAGAAACAGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: HTLTPICLAHWRCLRAPRDNPRL*WRNREG
Trigger: GCCCTCCCTGTTTCTCCACAACAGCCTGGGGTTGTC...TCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS GCA 90 bp CTTCTGACCATTCTGGGTTGGGAAATTCATACTGGCCCATTCGGATaGGAGTCTTCATGCCCGGAGAGATGGCAAGGCCGTGGTTGGAGT +
Preference number: 5 (lower is better)
Translates to: LLTILGWEIHTGPFG*ESSCPERWQGRGWS
Trigger: ACTCCAACCACGGCCTTGCCATCTCTCCGGGCATGAAGACTCGCATCCGAATGGGCCAGTATGAATTTCCCAACCCAGAATGGTCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS-3UTR CAA 90 bp CACTCCTCTCTGCCTCCCGGAACCCAGCTAATAGAGACAGGCCACAGAGGGCCTTTCTCCTGGGTCCTCTaGTTGAAGATCTGCAAAACT +
Preference number: 5 (lower is better)
Translates to: HSSLPPGTQLIETGHRGPFSWVL*LKICKT
Trigger: AGTTTTGCAGATCTTCAACAAGAGGACCCAGGAGAA...AGGCCCTCTGTGGCCTGTCTCTATTAGCTGGGTTCCGGGAGGCAGAGAGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS GCA 90 bp TCCACCGTCCAAACATTCCATGACAATCAGCAGGCACTTCCTCCCTaGGTACAGATTCTCGTACACATCCACGATCCGTACGATGTGCGG +
Preference number: 5 (lower is better)
Translates to: STVQTFHDNQQALPP*VQILVHIHDPYDVR
Trigger: CCGCACATCGTACGGATCGTGGATGTGTACGAGAATCTGTACGCAGGGAGGAAGTGCCTGCTGATTGTCATGGAATGTTTGGACGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS-3UTR CAA 90 bp GCCTGTTTCAGAATCTGGGTGGGCTTCCCAGGCACTTTGGCAGGCTCAGTATGGTCCCGATGGGCAATGTaGATTGAATGCAGATACTGG +
Preference number: 5 (lower is better)
Translates to: ACFRIWVGFPGTLAGSVWSRWAM*IECRYW
Trigger: CCAGTATCTGCATTCAATCAACATTGCCCATCGGGA...CCATACTGAGCCTGCCAAAGTGCCTGGGAAGCCCACCCAGATTCTGAAACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp CAGGAAATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCAGGTTCAAGAGCACCTaGCTCACTTCTCTCCACAGC +
Preference number: 5 (lower is better)
Translates to: QEMQKLCQQKLPRLTYMSRFKST*LTSLHS
Trigger: GCTGTGGAGAGAAGTGAGCAAGGTGCTCTTGAACCT...GCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp TACACTCACTCCTATTTGTCTGGCACACTGGAGATGTCTGAGGGCTCCGAGAGATCCTGTAGAGAGTTATaGCTTGTCCTCCCGTGGGCA +
Preference number: 5 (lower is better)
Translates to: YTHSYLSGTLEMSEGSERSCREL*LVLPWA
Trigger: TGCCCACGGGAGGACAAGCAATAACTCTCTACAGGA...TCTCTCGGAGCCCTCAGACATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp AAATACCCTCTAACAAACCACAAGCCTTTGCAGTATCCAGAGAGGAAGGCGTCTCTGGTCATCTCCTCCTaGACATCCTCCCACCGCTCC +
Preference number: 5 (lower is better)
Translates to: KYPLTNHKPLQYPERKASLVISS*TSSHRS
Trigger: GGAGCGGTGGGAGGATGTCAAGGAGGAGATGACCAG...AGACGCCTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTGTTAGAGGGTATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp ACTTTGGCAGGCTCAGTATGGGCAGGGCAGACCCAAGAAGGGAGAAGGTTCCTATACACTCACTCCTATTaGTCTGGCACACTGGAGATG +
Preference number: 5 (lower is better)
Translates to: TLAGSVWAGQTQEGRRFLYTHSY*SGTLEM
Trigger: CATCTCCAGTGTGCCAGACAAATAGGAGTGAGTGTA...TAGGAACCTTCTCCCTTCTTGGGTCTGCCCTGCCCATACTGAGCCTGCCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS GCA 90 bp ATTCTAAGAAACAGCACTGAGTTTGGACAGGAACACAGAATCCTCTaGTCACAACCTGGTCAGCCAAGTGGCCTGGTCGCTGTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: ILRNSTEFGQEHRIL*SQPGQPSGLVAVLV
Trigger: GACAAGAACAGCGACCAGGCCACTTGGCTGACCAGGTTGTGAGCAGAGGATTCTGTGTTCCTGTCCAAACTCAGTGCTGTTTCTTAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp CAGGAAATGCAAAAGCTCTGCCAACAGAAGCTGCCCAGGCTCACCTACATGAGCTTCAGCAGCAGAGGGTaGGATGCATCTTCAATCTTT +
Preference number: 5 (lower is better)
Translates to: QEMQKLCQQKLPRLTYMSFSSRG*DASSIF
Trigger: AAAGATTGAAGATGCATCCAACCCTCTGCTGCTGAA...GCTCATGTAGGTGAGCCTGGGCAGCTTCTGTTGGCAGAGCTTTTGCATTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp AAATACCCTCTAACAAACCACAAGCCTTTGCAGTATCCAGAGAGGAAGGCGTCTGTAGAGAGTTATTGCTaGTCCTCCCGTGGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: KYPLTNHKPLQYPERKASVESYC*SSRGQE
Trigger: CTCCTGCCCACGGGAGGACAAGCAATAACTCTCTAC...AGACGCCTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTGTTAGAGGGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS CCA 90 bp ATTTCGGATGCTTCTCTTTCTGTGAATGCCTGGTCTCCTCGATCCTaGATTCGGCTAAAGAGTTCTCCACCGTCCAAACATTCCATGACA +
Preference number: 5 (lower is better)
Translates to: ISDASLSVNAWSPRS*IRLKSSPPSKHSMT
Trigger: TGTCATGGAATGTTTGGACGGTGGAGAACTCTTTAGCCGAATCCAGGATCGAGGAGACCAGGCATTCACAGAAAGAGAAGCATCCGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS GCA 90 bp AAGAGATTCTCAGGCTTGACATCCCGATGGGCAATGTTGATTGAATaGAGATACTGGATGGCCTCACCGATGCTCTTCATGATTTCGGAT +
Preference number: 5 (lower is better)
Translates to: KRFSGLTSRWAMLIE*RYWMASPMLFMISD
Trigger: ATCCGAAATCATGAAGAGCATCGGTGAGGCCATCCAGTATCTGCATTCAATCAACATTGCCCATCGGGATGTCAAGCCTGAGAATCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS-3UTR CAA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGAATGATGGCGTTCTTCTaGATCTGCAGGCCGGACTTG +
Preference number: 5 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGMMAFF*ICRPDL
Trigger: CAAGTCCGGCCTGCAGATCAAGAAGAACGCCATCAT...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp AAATACCCTCTAACAAACCACAAGCCTTTGCAGTATCCAGAGAGGAAGGCGTCTATGGCGTTGGGCCTTTaGGAGGTGTATAAGAGATTC +
Preference number: 5 (lower is better)
Translates to: KYPLTNHKPLQYPERKASMALGL*EVYKRF
Trigger: GAATCTCTTATACACCTCCAAAAGGCCCAACGCCAT...AGACGCCTTCCTCTCTGGATACTGCAAAGGCTTGTGGTTTGTTAGAGGGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367103.4
CDS-3UTR CAA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGATGGCTGGTGGTTTCCTaGGCAAAGCCAAAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGWLVVS*AKPKSV
Trigger: CACTGACTTTGGCTTTGCCAAGGAAACCACCAGCCA...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGAAAGAGATTCTCAGGCTaGACATCCCGATGGGCAATG +
Preference number: 5 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGKRFSG*TSRWAM
Trigger: CATTGCCCATCGGGATGTCAAGCCTGAGAATCTCTT...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGAAGTTTCAGGATGGCGTaGGGCCTTTTGGAGGTGTAT +
Preference number: 5 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGSFRMA*GLLEVY
Trigger: ATACACCTCCAAAAGGCCCAACGCCATCCTGAAACT...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS-3UTR CAA 90 bp CCCATTAGAGACCCAGGGAATAAAAGGATTCTAAGAAACAGCACTGAGTTTGGATCCTGGGTCCTCTTGTaGAAGATCTGCAAAACTTTG +
Preference number: 5 (lower is better)
Translates to: PIRDPGNKRILRNSTEFGSWVLL*KICKTL
Trigger: CAAAGTTTTGCAGATCTTCAACAAGAGGACCCAGGA...TCCAAACTCAGTGCTGTTTCTTAGAATCCTTTTATTCCCTGGGTCTCTAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS CCA 72 bp TCGTACACATCCACGATCCGTACGATGTGCGGGCACTaGGAGGCCCGCCAGTGCAGCTCCACCTCCCTGCGG +
Preference number: 6 (lower is better)
Translates to: SYTSTIRTMCGH*EARQCSSTSLR
Trigger: CCGCAGGGAGGTGGAGCTGCACTGGCGGGCCTCCCAGTGCCCGCACATCGTACGGATCGTGGATGTGTACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS TCA 72 bp CCTTGGCCCTGCCTCCAGCCCTCCACACAGGCAAAATaGAGCAGGACGCACCCCGCAGGCGTGGGCATAGGT +
Preference number: 6 (lower is better)
Translates to: PWPCLQPSTQAK*SRTHPAGVGIG
Trigger: ACCTATGCCCACGCCTGCGGGGTGCGTCCTGCTTCATTTTGCCTGTGTGGAGGGCTGGAGGCAGGGCCAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479009.1
CDS TCA 72 bp CCTGGAGCCCCTCTCACCCAGTGGTGCCCCTCACCTTaGCATCCTCCCACCGCTCCTTGTCCTCCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: PGAPLTQWCPSP*HPPTAPCPPSG
Trigger: TCCTGAAGGAGGACAAGGAGCGGTGGGAGGATGTCAAGGTGAGGGGCACCACTGGGTGAGAGGGGCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479009.1
CDS CAA 72 bp TCGATGATGGCGTTCTTCTTGATCTGCAGGCCGGACTaGACGTGGAACTGCGGGAACTGCTGCGGGGGCGGC +
Preference number: 6 (lower is better)
Translates to: SMMAFFLICRPD*TWNCGNCCGGG
Trigger: GCCGCCCCCGCAGCAGTTCCCGCAGTTCCACGTCAAGTCCGGCCTGCAGATCAAGAAGAACGCCATCATCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS GCA 72 bp TACAGATTCTCGTACACATCCACGATCCGTACGATGTaGGGGCACTGGGAGGCCCGCCAGTGCAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: YRFSYTSTIRTM*GHWEARQCSST
Trigger: GGTGGAGCTGCACTGGCGGGCCTCCCAGTGCCCGCACATCGTACGGATCGTGGATGTGTACGAGAATCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS GCA 72 bp AAACCAGGTTCAAAGAGGGGGTGCATGGAGGCAGGCTaGCGGAGCAACTGGCCCCAAGGACCATTACGGCTG +
Preference number: 6 (lower is better)
Translates to: KPGSKRGCMEAG*RSNWPQGPLRL
Trigger: CAGCCGTAATGGTCCTTGGGGCCAGTTGCTCCGGCAGCCTGCCTCCATGCACCCCCTCTTTGAACCTGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479009.1
CDS CCA 72 bp AAGAGGGGGTGCATGGAGGCAGGCTGCCGGAGCAACTaGCCCCAAGGACCATTACGGCTGTACCACTTGAGA +
Preference number: 6 (lower is better)
Translates to: KRGCMEAGCRSN*PQGPLRLYHLR
Trigger: TCTCAAGTGGTACAGCCGTAATGGTCCTTGGGGCCAGTTGCTCCGGCAGCCTGCCTCCATGCACCCCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479009.1
CDS CCA 72 bp CCTCCCACCGCTCCTTGTCCTCCTTCAGGACCCGGCTaGTGTGCAGTGGGGTTTGAGGGACCTTTGTTGATT +
Preference number: 6 (lower is better)
Translates to: PPTAPCPPSGPG*CAVGFEGPLLI
Trigger: AATCAACAAAGGTCCCTCAAACCCCACTGCACACCAGCCGGGTCCTGAAGGAGGACAAGGAGCGGTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294981.8
ENST00000367103.4
ENST00000479009.1
CDS TCA 72 bp CTGGTCGCTGTTCTTGTCATGAAGACACCCCTGGGATaGGAGAGGCAGAATCAAGCTCTCCCCTACCAGCAC +
Preference number: 6 (lower is better)
Translates to: LVAVLVMKTPLG*ERQNQALPYQH
Trigger: GTGCTGGTAGGGGAGAGCTTGATTCTGCCTCTCTCATCCCAGGGGTGTCTTCATGACAAGAACAGCGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479009.1
CDS TCA 72 bp CTGGTCAGCCAAGTGGCCTGGTCGCTGTTCTTGTCATaGAGACACCCCTGGGATGAGAGAGGCAGAATCAAG +
Preference number: 6 (lower is better)
Translates to: LVSQVAWSLFLS*RHPWDERGRIK
Trigger: CTTGATTCTGCCTCTCTCATCCCAGGGGTGTCTTCATGACAAGAACAGCGACCAGGCCACTTGGCTGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479009.1
CDS CAA 72 bp TTCTCCTGGGTCCTCTTGTTGAAGATCTGCAAAACTTaGCCGTTGATGCCCAGCCCCAGGACCTGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: FSWVLLLKICKT*PLMPSPRTWLV
Trigger: CACCAGCCAGGTCCTGGGGCTGGGCATCAACGGCAAAGTTTTGCAGATCTTCAACAAGAGGACCCAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS GCA 72 bp ATTCTGGGTTGGGAAATTCATACTGGCCCATTCGGATaGGAGTCTTCATGCCCGGAGAGATGGCAAGGCCGT +
Preference number: 6 (lower is better)
Translates to: ILGWEIHTGPFG*ESSCPERWQGR
Trigger: ACGGCCTTGCCATCTCTCCGGGCATGAAGACTCGCATCCGAATGGGCCAGTATGAATTTCCCAACCCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS GCA 72 bp AACAGCACTGAGTTTGGACAGGAACACAGAATCCTCTaGTCACAACCTGGTCAGCCAAGTGGCCTGGTCGCT +
Preference number: 6 (lower is better)
Translates to: NSTEFGQEHRIL*SQPGQPSGLVA
Trigger: AGCGACCAGGCCACTTGGCTGACCAGGTTGTGAGCAGAGGATTCTGTGTTCCTGTCCAAACTCAGTGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS CCA 72 bp ACACAGAATCCTCTGCTCACAACCTGGTCAGCCAAGTaGCCTGGTCGCTGTTCTTGTCATGAAGACACCCCT +
Preference number: 6 (lower is better)
Translates to: TQNPLLTTWSAK*PGRCSCHEDTP
Trigger: AGGGGTGTCTTCATGACAAGAACAGCGACCAGGCCACTTGGCTGACCAGGTTGTGAGCAGAGGATTCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000479009.1
CDS CCA 72 bp GTTTGGACAGGAACACAGAATCCTCTGCTCACAACCTaGTCAGCCAAGTGGCCTGGTCGCTGTTCTTGTCAT +
Preference number: 6 (lower is better)
Translates to: VWTGTQNPLLTT*SAKWPGRCSCH
Trigger: ATGACAAGAACAGCGACCAGGCCACTTGGCTGACCAGGTTGTGAGCAGAGGATTCTGTGTTCCTGTCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294981.8
CDS CCA 72 bp GCTTCTCTTTCTGTGAATGCCTGGTCTCCTCGATCCTaGATTCGGCTAAAGAGTTCTCCACCGTCCAAACTG +
Preference number: 6 (lower is better)
Translates to: ASLSVNAWSPRS*IRLKSSPPSKL
Trigger: CAGTTTGGACGGTGGAGAACTCTTTAGCCGAATCCAGGATCGAGGAGACCAGGCATTCACAGAAAGAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493447.1
CDS GCA 72 bp CAAACATTCCATGACAATCAGCAGGCACTTCCTCCCTaGGTACAGATTCTCGTACACATCCACGATCCGTAC +
Preference number: 6 (lower is better)
Translates to: QTFHDNQQALPP*VQILVHIHDPY
Trigger: GTACGGATCGTGGATGTGTACGAGAATCTGTACGCAGGGAGGAAGTGCCTGCTGATTGTCATGGAATGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS CCA 72 bp GCTTCTCTTTCTGTGAATGCCTGGTCTCCTCGATCCTaGATTCGGCTAAAGAGTTCTCCACCGTCCAAACAT +
Preference number: 6 (lower is better)
Translates to: ASLSVNAWSPRS*IRLKSSPPSKH
Trigger: ATGTTTGGACGGTGGAGAACTCTTTAGCCGAATCCAGGATCGAGGAGACCAGGCATTCACAGAAAGAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS CAA 72 bp AGCATTTTGAGGGCGAATTTCTCCTGGGTCCTCTTGTaGAAGATCTGCAAAACTTTGCCGTTGATGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SILRANFSWVLL*KICKTLPLMPS
Trigger: GCTGGGCATCAACGGCAAAGTTTTGCAGATCTTCAACAAGAGGACCCAGGAGAAATTCGCCCTCAAAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS CAA 72 bp CCAAAGTCAGTGAGTTTCAGGATGGCGTTGGGCCTTTaGGAGGTGTATAAGAGATTCTCAGGCTTGACATCC +
Preference number: 6 (lower is better)
Translates to: PKSVSFRMALGL*EVYKRFSGLTS
Trigger: GGATGTCAAGCCTGAGAATCTCTTATACACCTCCAAAAGGCCCAACGCCATCCTGAAACTCACTGACTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4
CDS CCA 72 bp ACATCCCGATGGGCAATGTTGATTGAATGCAGATACTaGATGGCCTCACCGATGCTCTTCATGATTTCGGAT +
Preference number: 6 (lower is better)
Translates to: TSRWAMLIECRY*MASPMLFMISD
Trigger: ATCCGAAATCATGAAGAGCATCGGTGAGGCCATCCAGTATCTGCATTCAATCAACATTGCCCATCGGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294981.8
ENST00000367103.4