RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAPKAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000119487

Ensembl transcript IDs: ENST00000265960.8, ENST00000350766.7, ENST00000373496.3, ENST00000373498.5, ENST00000373503.7, ENST00000373511.6, ENST00000394060.7, ENST00000394063.5, ENST00000420643.5, ENST00000427078.5, ENST00000433483.1, ENST00000437973.2, ENST00000444226.1, ENST00000448439.1, ENST00000468896.1, ENST00000473837.5, ENST00000483937.5, ENST00000496063.1, ENST00000497932.5

Found 890 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATCTGGTGTGGCCAGAGGCGTGGTGTCAGGGGCATCTGATCCCTTaGCTGTTCCCACCCAGGGAGCCGGACGGCACGGACACAGGTCTC +
Preference number: 1 (lower is better)
Translates to: HLVWPEAWCQGHLIP*LFPPREPDGTDTGL
Trigger: GAGACCTGTGTCCGTGCCGTCCGGCTCCCTGGGTGGGAACAGGCAAGGGATCAGATGCCCCTGACACCACGCCTCTGGCCACACCAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR TCA 90 bp CGGCCCTGGCTGGGGACAGTAAGGACATCACCGCAGGAGGGACACTaGAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCAGAG +
Preference number: 1 (lower is better)
Translates to: RPWLGTVRTSPQEGH*RGCRGLQRHLVWPE
Trigger: CTCTGGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR TCA 90 bp GACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTaGGCTACGGAACAGATTGAGGCTGGAGGCCAGTGTCACTGCTGC +
Preference number: 1 (lower is better)
Translates to: DTGWTLGHLALAGRL*ATEQIEAGGQCHCC
Trigger: GCAGCAGTGACACTGGCCTCCAGCCTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR CCA 90 bp TGCAAGGAAATGTGTGGGCACGGCTCTGTACATCCTCGGGCAGGGTaGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGG +
Preference number: 1 (lower is better)
Translates to: CKEMCGHGSVHPRAG*QALKVAGRHVAPLG
Trigger: CCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCACACATTTCCTTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR CCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTaGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAG +
Preference number: 1 (lower is better)
Translates to: AGIEGGWAARGSSRG*SDPQASLIKATAKQ
Trigger: CTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR CCA 90 bp CACCCCACACTGTCCACGCAGCTCCTGGGCTCTGAGGTCAGAAGCTaGGGTGTGCTGAAGGGGAAAGTGACACGGCCTTGGACACACCAC +
Preference number: 1 (lower is better)
Translates to: HPTLSTQLLGSEVRS*GVLKGKVTRPWTHH
Trigger: GTGGTGTGTCCAAGGCCGTGTCACTTTCCCCTTCAGCACACCCCAGCTTCTGACCTCAGAGCCCAGGAGCTGCGTGGACAGTGTGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR TCA 90 bp GGCACGGACACAGGTCTCCCTCCGCTCACCCCTCTCCCTGAAACGTaGGAAACAGCAGCTTTCCGCCTGCTTGAAAAAGGAGGCAGGCGC +
Preference number: 1 (lower is better)
Translates to: GTDTGLPPLTPLPET*ETAAFRLLEKGGRR
Trigger: GCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTGCTGTTTCTCACGTTTCAGGGAGAGGGGTGAGCGGAGGGAGACCTGTGTCCGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR GCA 90 bp TACACTTGCTACTTAAGAAACGGAAAGACCATGTCTGGCTGGGAGTaGAGCGTGCCTGAGGACCAGCCACCGCCCCTCCTCCTGGCACCC +
Preference number: 1 (lower is better)
Translates to: YTCYLRNGKTMSGWE*SVPEDQPPPLLLAP
Trigger: GGGTGCCAGGAGGAGGGGCGGTGGCTGGTCCTCAGGCACGCTGCACTCCCAGCCAGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR GCA 90 bp GAAGCAGAGAACATGCAGGTGGAACTGCCAGCTGAAACCTACACTTaGTACTTAAGAAACGGAAAGACCATGTCTGGCTGGGAGTGCAGC +
Preference number: 1 (lower is better)
Translates to: EAENMQVELPAETYT*YLRNGKTMSGWECS
Trigger: GCTGCACTCCCAGCCAGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTCCACCTGCATGTTCTCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR TCA 90 bp CTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTGGAACTGCCAGCTaGAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTGG +
Preference number: 1 (lower is better)
Translates to: LPRQRSREHAGGTAS*NLHLLLKKRKDHVW
Trigger: CCAGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTCCACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR CCA 90 bp TTGTTGTTTGCTTTAAGAAATTTGATCAAGTTGCAAGGAAATGTGTaGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAA +
Preference number: 1 (lower is better)
Translates to: LLFALRNLIKLQGNV*ARLCTSSGRVAGIE
Trigger: TTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCACACATTTCCTTGCAACTTGATCAAATTTCTTAAAGCAAACAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR TCA 90 bp TCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: SSGRVAGIEGGWAARGSSPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR TCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR TCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR TCA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: TSGHRVDSRALGPGRQALPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
3UTR-3UTR TCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCCCCCGAGAGCCCACCTaGCCTGTGCCAGTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGPREPT*PVPVSQ
Trigger: CTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGG...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR CCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCGGCTCCTCTAGGGGGTaGTCTGACCCCCAAGCATCG +
Preference number: 2 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLGSSRG*SDPQAS
Trigger: CGATGCTTGGGGGTCAGACCACCCCCTAGAGGAGCC...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR GCA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGCCCCGAGAGCCCACCTaGCCTGTGCCAGTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVPREPT*PVPVSQ
Trigger: CTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGG...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR CAA 90 bp ATGTGTGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATaGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTG +
Preference number: 2 (lower is better)
Translates to: MCGHGSVHPRAGWQA*KVAGRHVAPLGGGL
Trigger: CAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCACACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR CAA 90 bp GCATCTGGTGTGGCCAGAGGCGTGGTGTCAGGGGCATCTGATCCCTaGCCTGTTCCCACCCAGGGAGCCGGACGGCACGGACACAGGTCT +
Preference number: 2 (lower is better)
Translates to: ASGVARGVVSGASDP*PVPTQGAGRHGHRS
Trigger: AGACCTGTGTCCGTGCCGTCCGGCTCCCTGGGTGGGAACAGGCAAGGGATCAGATGCCCCTGACACCACGCCTCTGGCCACACCAGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTACCCCGAGAGCCCACCTaGCCTGTGCCAGTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLPREPT*PVPVSQ
Trigger: CTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGG...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
3UTR-3UTR CCA 90 bp TCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTCAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 2 (lower is better)
Translates to: SSGRVAGIEGGWAARGSSQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR GCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCCCCCGAGAGCCCACCTaGCCTGTGCCAGTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPPREPT*PVPVSQ
Trigger: CTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGG...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
3UTR-3UTR CCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCCAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 2 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR CCA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGGGCTCCTCTAGGGGGTaGTCTGACCCCCAAGCATCG +
Preference number: 2 (lower is better)
Translates to: TSGHRVDSRALGPGRQALGSSRG*SDPQAS
Trigger: CGATGCTTGGGGGTCAGACCACCCCCTAGAGGAGCC...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR TCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCCTGGCAGGCAGGCTCTaGGCTACGGAACAGATTGAG +
Preference number: 2 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGLAGRL*ATEQIE
Trigger: CTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAG...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR TCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCCTGGCAGGCAGGCTCTaGGCTACGGAACAGATTGAG +
Preference number: 2 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLLAGRL*ATEQIE
Trigger: CTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAG...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
3UTR-3UTR CCA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGCAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 2 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR CCA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGCATCCTCGGGCAGGGTaGCAGGCATTGAAGGTGGCT +
Preference number: 2 (lower is better)
Translates to: TSGHRVDSRALGPGRQALHPRAG*QALKVA
Trigger: AGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATG...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR CCA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACGTGTGGCCAGAGGCGTaGTGTCAGGGGCATCTGATC +
Preference number: 2 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDVWPEA*CQGHLI
Trigger: GATCAGATGCCCCTGACACCACGCCTCTGGCCACAC...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTGCTTATCAAAGCCACTaGCAAGCAGACTTCCGTCCC +
Preference number: 2 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGAYQSH*QADFRP
Trigger: GGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGC...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR GCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCAGAGGCTGTCGAGGACTaGAGAGGCATCTGGTGTGGC +
Preference number: 2 (lower is better)
Translates to: SVKHRSPALAGDSKDITAEAVED*RGIWCG
Trigger: GCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTC...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCCAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 2 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACTGTCCACGCAGCTCCTaGGCTCTGAGGTCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDCPRSS*ALRSEA
Trigger: AGCTTCTGACCTCAGAGCCCAGGAGCTGCGTGGACA...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCACGGAAAGACCATGTCTaGCTGGGAGTGCAGCGTGCC +
Preference number: 2 (lower is better)
Translates to: SVKHRSPALAGDSKDITARKDHV*LGVQRA
Trigger: GGCACGCTGCACTCCCAGCCAGACATGGTCTTTCCG...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR TCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTACTGGCAGGCAGGCTCTaGGCTACGGAACAGATTGAG +
Preference number: 2 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLLAGRL*ATEQIE
Trigger: CTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAG...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
3UTR-3UTR TCA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACCCTCTCCCTGAAACGTaGGAAACAGCAGCTTTCCGC +
Preference number: 2 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDPLPET*ETAAFR
Trigger: GCGGAAAGCTGCTGTTTCTCACGTTTCAGGGAGAGG...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR TCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCAGCTCACCCCTCTCCCTaGAACGTGAGAAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: SVKHRSPALAGDSKDITAAHPSP*NVRNSS
Trigger: GCTGCTGTTTCTCACGTTTCAGGGAGAGGGGTGAGC...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR TCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGACTTGTGTTTGGACTTaGACAATGACACAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGTCVWT*TMTQLQ
Trigger: TTGCAGCTGTGTCATTGTTCAAGTCCAAACACAAGT...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR-3UTR GCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCGCTTATCAAAGCCACTaGCAAGCAGACTTCCGTCCC +
Preference number: 2 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLAYQSH*QADFRP
Trigger: GGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGC...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
3UTR-3UTR GCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCAGCTTATCAAAGCCACTaGCAAGCAGACTTCCGTCCC +
Preference number: 2 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAAAYQSH*QADFRP
Trigger: GGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGC...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR GCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGGGCCAGTGTCACTGCTaGCCGGATTTCTTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: CQADFRPMAMSPALPPRGGQCHC*PDFFSF
Trigger: GAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCC...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR-3UTR CCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCATCCTCGGGCAGGGTaGCAGGCATTGAAGGTGGCT +
Preference number: 2 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLHPRAG*QALKVA
Trigger: AGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATG...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR CCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCAAAGACCATGTCTGGCTaGGAGTGCAGCGTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: SVKHRSPALAGDSKDITAKTMSG*ECSVPE
Trigger: CTCAGGCACGCTGCACTCCCAGCCAGACATGGTCTT...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCAGAGGAATGGGGAATGTaGCCCCTTCCAAGGCAGCGA +
Preference number: 2 (lower is better)
Translates to: SVKHRSPALAGDSKDITAEEWGM*PLPRQR
Trigger: TCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR TCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTGGCAGGCAGGCTCTaGGCTACGGAACAGATTGAG +
Preference number: 2 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLLAGRL*ATEQIE
Trigger: CTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAG...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
3UTR-3UTR GCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCGCGAAGCAGAGAACATaGAGGTGGAACTGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAAKQRT*RWNCQL
Trigger: CAGCTGGCAGTTCCACCTGCATGTTCTCTGCTTCGC...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTGGCATTGAAGGTGGCTaGGCGGCACGTGGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGGIEGG*AARGSS
Trigger: AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCC...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTATGTCTGGCTGGGAGTaGAGCGTGCCTGAGGACCAG +
Preference number: 2 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGMSGWE*SVPEDQ
Trigger: CTGGTCCTCAGGCACGCTGCACTCCCAGCCAGACAT...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGTTGCAAGGAAATGTGTaGGCACGGCTCTGTACATCC +
Preference number: 2 (lower is better)
Translates to: TSGHRVDSRALGPGRQALLQGNV*ARLCTS
Trigger: GGATGTACAGAGCCGTGCCCACACATTTCCTTGCAA...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR CCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGTTGCAAGGAAATGTGTaGGCACGGCTCTGTACATCC +
Preference number: 2 (lower is better)
Translates to: CQADFRPMAMSPALPPRGLQGNV*ARLCTS
Trigger: GGATGTACAGAGCCGTGCCCACACATTTCCTTGCAA...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR TCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCTTGCAAGGAAATGTGTaGGCACGGCTCTGTACATCC +
Preference number: 2 (lower is better)
Translates to: AGGTLKRLSRTAEASGVALQGNV*ARLCTS
Trigger: GGATGTACAGAGCCGTGCCCACACATTTCCTTGCAA...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCGATTTCTTCTCCTTCTaGAAGCTGAAGCTCGTACGT +
Preference number: 2 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLDFFSF*KLKLVR
Trigger: ACGTACGAGCTTCAGCTTCCAGAAGGAGAAGAAATC...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR-3UTR TCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTCCCCGAGAGCCCACCTaGCCTGTGCCAGTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPPREPT*PVPVSQ
Trigger: CTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGG...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp ATTGAGGCTGGAGGCCAGTGTCACTGCTGCCCGGATTTCTTCTCCTTCTGGAAGGCTTATCAAAGCCACTaGCAAGCAGACTTCCGTCCC +
Preference number: 2 (lower is better)
Translates to: IEAGGQCHCCPDFFSFWKAYQSH*QADFRP
Trigger: GGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGC...CTTCCAGAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCCAGCCTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR-3UTR CCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGGCTCCTCTAGGGGGTaGTCTGACCCCCAAGCATCG +
Preference number: 2 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPGSSRG*SDPQAS
Trigger: CGATGCTTGGGGGTCAGACCACCCCCTAGAGGAGCC...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCATACCCTCGAAGCAAATaGACTCATTTAAACAAATGG +
Preference number: 2 (lower is better)
Translates to: SVKHRSPALAGDSKDITAYPRSK*THLNKW
Trigger: CCATTTGTTTAAATGAGTGCATTTGCTTCGAGGGTA...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTGGCTCCTCTAGGGGGTaGTCTGACCCCCAAGCATCG +
Preference number: 2 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSGSSRG*SDPQAS
Trigger: CGATGCTTGGGGGTCAGACCACCCCCTAGAGGAGCC...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTGGCATTGAAGGTGGCTaGGCGGCACGTGGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSGIEGG*AARGSS
Trigger: AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCC...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTGCTGGGAGTGCAGCGTaGCTGAGGACCAGCCACCGC +
Preference number: 2 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLAGSAA*LRTSHR
Trigger: GCGGTGGCTGGTCCTCAGGCACGCTGCACTCCCAGC...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR CAA 90 bp CTTCTGGAAGCTGAAGCTCGTACGTCTGTTCAGTTTTCTTTGTTTTaGAGCAAAGTAGTCAGCCCGGGCAGTGCTAGCTCGCGATTCCAG +
Preference number: 2 (lower is better)
Translates to: LLEAEARTSVQFSLF*SKVVSPGSASSRFQ
Trigger: CTGGAATCGCGAGCTAGCACTGCCCGGGCTGACTACTTTGCTCAAAAACAAAGAAAACTGAACAGACGTACGAGCTTCAGCTTCCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR-3UTR CCA 90 bp GGAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTGAACAAAGATCAGAATCAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 2 (lower is better)
Translates to: GMEDIRKGRSCWLNKDQNQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTATGTCTGGCTGGGAGTaGAGCGTGCCTGAGGACCAG +
Preference number: 2 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLMSGWE*SVPEDQ
Trigger: CTGGTCCTCAGGCACGCTGCACTCCCAGCCAGACAT...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp GGAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTGAACAAAGATCAGAATCAGCAGCTTTCCGCCTaGTTGAAAAAGGAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: GMEDIRKGRSCWLNKDQNQQLSA*LKKEAG
Trigger: GCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTGCTG...ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTGGCATTGAAGGTGGCTaGGCGGCACGTGGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFGIEGG*AARGSS
Trigger: AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCC...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTTCTGAGGTCAGAAGCTaGGGTGTGCTGAAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSSEVRS*GVLKGK
Trigger: TTTCCCCTTCAGCACACCCCAGCTTCTGACCTCAGA...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTCTCCGCCCCAAAGAATaGTCCATCATACCAACCATG +
Preference number: 2 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSLRPKE*SIIPTM
Trigger: CATGGTTGGTATGATGGACCATTCTTTGGGGCGGAG...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR TCA 90 bp GGAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTGAACAAAGATCAGAATGGTGGAACTGCCAGCTaGAACCTACACTTGCTACTT +
Preference number: 2 (lower is better)
Translates to: GMEDIRKGRSCWLNKDQNGGTAS*NLHLLL
Trigger: AAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTCCACC...ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR TCA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCATCCTTAACACAGCCTTaGCAGCCAGTGAAATTAGTG +
Preference number: 2 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPSLTQP*QPVKLV
Trigger: CACTAATTTCACTGGCTGTCAAGGCTGTGTTAAGGA...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
3UTR-3UTR CCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGACATCCTCGGGCAGGGTaGCAGGCATTGAAGGTGGCT +
Preference number: 2 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGHPRAG*QALKVA
Trigger: AGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATG...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CCA 90 bp GGAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTGAACAAAGATCAGAATTTGCAAGGAAATGTGTaGGCACGGCTCTGTACATCC +
Preference number: 2 (lower is better)
Translates to: GMEDIRKGRSCWLNKDQNLQGNV*ARLCTS
Trigger: GGATGTACAGAGCCGTGCCCACACATTTCCTTGCAA...ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR TCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATACTGGCAGGCAGGCTCTaGGCTACGGAACAGATTGAG +
Preference number: 2 (lower is better)
Translates to: AFPICLFNMGTDFKESNILAGRL*ATEQIE
Trigger: CTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAG...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTGCTTATCAAAGCCACTaGCAAGCAGACTTCCGTCCC +
Preference number: 2 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFAYQSH*QADFRP
Trigger: GGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGC...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCATAGCTTTTCCAATCTaGCTGTTCAATATGGGAACA +
Preference number: 2 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPIAFPI*LFNMGT
Trigger: TGTTCCCATATTGAACAGGCAGATTGGAAAAGCTAT...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTATAGCTTTTCCAATCTaGCTGTTCAATATGGGAACA +
Preference number: 2 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSIAFPI*LFNMGT
Trigger: TGTTCCCATATTGAACAGGCAGATTGGAAAAGCTAT...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp GGAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTGAACAAAGATCAGAATCACTCAGCTTTAAGATaGTGTTTTAGACACATCTCT +
Preference number: 2 (lower is better)
Translates to: GMEDIRKGRSCWLNKDQNHSALR*CFRHIS
Trigger: AGAGATGTGTCTAAAACAGCATCTTAAAGCTGAGTG...ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR GCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTATAGCTTTTCCAATCTaGCTGTTCAATATGGGAACA +
Preference number: 2 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLIAFPI*LFNMGT
Trigger: TGTTCCCATATTGAACAGGCAGATTGGAAAAGCTAT...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CAA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCTGGACTCTAGGGCACTaGGCCCTGGCAGGCAGGCTC +
Preference number: 3 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGWTLGH*ALAGRL
Trigger: GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
3UTR-3UTR CAA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCTGGACTCTAGGGCACTaGGCCCTGGCAGGCAGGCTC +
Preference number: 3 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLWTLGH*ALAGRL
Trigger: GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
3UTR-3UTR CAA 90 bp TCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTTGGACTCTAGGGCACTaGGCCCTGGCAGGCAGGCTC +
Preference number: 3 (lower is better)
Translates to: SSGRVAGIEGGWAARGSSWTLGH*ALAGRL
Trigger: GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA...AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR GCA 72 bp TGGCCAGAGGCGTGGTGTCAGGGGCATCTGATCCCTTaGCTGTTCCCACCCAGGGAGCCGGACGGCACGGAC +
Preference number: 3 (lower is better)
Translates to: WPEAWCQGHLIP*LFPPREPDGTD
Trigger: GTCCGTGCCGTCCGGCTCCCTGGGTGGGAACAGGCAAGGGATCAGATGCCCCTGACACCACGCCTCTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR CCA 72 bp ACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTaGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGAC +
Preference number: 3 (lower is better)
Translates to: TSSGRVAGIEGG*AARGSSRGWSD
Trigger: GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR CCA 72 bp ATGTGTGGGCACGGCTCTGTACATCCTCGGGCAGGGTaGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCT +
Preference number: 3 (lower is better)
Translates to: MCGHGSVHPRAG*QALKVAGRHVA
Trigger: AGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCACACAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR-3UTR CAA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCTTGAGCACAATTTCATaGACGGTAGCAGCGTCCGAT +
Preference number: 3 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLLSTIS*TVAASD
Trigger: ATCGGACGCTGCTACCGTCAATGAAATTGTGCTCAA...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR TCA 72 bp TGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTaGGCTACGGAACAGATTGAGGCTGGAGGCCAGTGT +
Preference number: 3 (lower is better)
Translates to: WTLGHLALAGRL*ATEQIEAGGQC
Trigger: ACACTGGCCTCCAGCCTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR-3UTR CAA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATTGGACTCTAGGGCACTaGGCCCTGGCAGGCAGGCTC +
Preference number: 3 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHWTLGH*ALAGRL
Trigger: GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR TCA 72 bp CTGGGGACAGTAAGGACATCACCGCAGGAGGGACACTaGAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTG +
Preference number: 3 (lower is better)
Translates to: LGTVRTSPQEGH*RGCRGLQRHLV
Trigger: CACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGCGGTGATGTCCTTACTGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CAA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCATGGACTCTAGGGCACTaGGCCCTGGCAGGCAGGCTC +
Preference number: 3 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPWTLGH*ALAGRL
Trigger: GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
3UTR TCA 72 bp ACAGGTCTCCCTCCGCTCACCCCTCTCCCTGAAACGTaGGAAACAGCAGCTTTCCGCCTGCTTGAAAAAGGA +
Preference number: 3 (lower is better)
Translates to: TGLPPLTPLPET*ETAAFRLLEKG
Trigger: TCCTTTTTCAAGCAGGCGGAAAGCTGCTGTTTCTCACGTTTCAGGGAGAGGGGTGAGCGGAGGGAGACCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR GCA 72 bp GCTACGGAACAGATTGAGGCTGGAGGCCAGTGTCACTaGTGCCCGGATTTCTTCTCCTTCTGGAAGCTGAAG +
Preference number: 3 (lower is better)
Translates to: ATEQIEAGGQCH*CPDFFSFWKLK
Trigger: CTTCAGCTTCCAGAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCCAGCCTCAATCTGTTCCGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR-3UTR CAA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCCGTTCTGTGGAGCACTaGTGTTTGGACTTGAACAAT +
Preference number: 3 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPRSVEH*CLDLNN
Trigger: ATTGTTCAAGTCCAAACACAAGTGCTCCACAGAACG...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR-3UTR CAA 90 bp GCTGGAGGCCAGTGTCACTGCTGCCCGGATTTCTTCTCCTTCTGGAAGCTGAAGCAGTTTTCTTTGTTTTaGAGCAAAGTAGTCAGCCCG +
Preference number: 3 (lower is better)
Translates to: AGGQCHCCPDFFSFWKLKQFSLF*SKVVSP
Trigger: CGGGCTGACTACTTTGCTCAAAAACAAAGAAAACTG...CTTCAGCTTCCAGAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR CCA 72 bp GGCCAGTGTCACTGCTGCCCGGATTTCTTCTCCTTCTaGAAGCTGAAGCTCGTACGTCTGTTCAGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: GQCHCCPDFFSF*KLKLVRLFSFL
Trigger: AAGAAAACTGAACAGACGTACGAGCTTCAGCTTCCAGAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR CCA 72 bp GCTTTAAGAAATTTGATCAAGTTGCAAGGAAATGTGTaGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCA +
Preference number: 3 (lower is better)
Translates to: ALRNLIKLQGNV*ARLCTSSGRVA
Trigger: TGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCACACATTTCCTTGCAACTTGATCAAATTTCTTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
3UTR TCA 72 bp CAGCGAAGCAGAGAACATGCAGGTGGAACTGCCAGCTaGAACCTACACTTGCTACTTAAGAAACGGAAAGAC +
Preference number: 3 (lower is better)
Translates to: QRSREHAGGTAS*NLHLLLKKRKD
Trigger: GTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTCCACCTGCATGTTCTCTGCTTCGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR-3UTR CAA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTCAGCTTTCCGCCTGCTaGAAAAAGGAGGCAGGCGCT +
Preference number: 3 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLQLSAC*KKEAGA
Trigger: AGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTG...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR TCA 72 bp CAGAGTGACAGAATTTCCCGTGATGGCAAAGGTTTCTaGCATCCAGTCCAGTACTCAAAACCCACAGCAGTT +
Preference number: 3 (lower is better)
Translates to: QSDRISRDGKGF*HPVQYSKPTAV
Trigger: AACTGCTGTGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
3UTR-3UTR CAA 90 bp AATTTCATTGACGGTAGCAGCGTCCGATTCAAAGTAGAGGTGTTTATAGTCGTGGTGGAGCACTTGTGTTaGGACTTGAACAATGACACA +
Preference number: 3 (lower is better)
Translates to: NFIDGSSVRFKVEVFIVVVEHLC*DLNNDT
Trigger: TGTGTCATTGTTCAAGTCCAAACACAAGTGCTCCAC...CACGACTATAAACACCTCTACTTTGAATCGGACGCTGCTACCGTCAATGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR TCA 72 bp GAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTaGACAAAGATCAGAATGAAAGAAGAATTCATCAGC +
Preference number: 3 (lower is better)
Translates to: EWKTLEKDAPVG*TKIRMKEEFIS
Trigger: GCTGATGAATTCTTCTTTCATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR GCA 72 bp GACCCCTTGTGCAAAGAAATACACTCAGCTTTAAGATaGTGTTTTAGACACATCTCTTCCTGTACAACAATT +
Preference number: 3 (lower is better)
Translates to: DPLCKEIHSALR*CFRHISSCTTI
Trigger: AATTGTTGTACAGGAAGAGATGTGTCTAAAACAGCATCTTAAAGCTGAGTGTATTTCTTTGCACAAGGGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR GCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGCCCTGCCCCGAGCTCTaGACTCTCGGGATCCACGGG +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGPCPEL*TLGIHG
Trigger: CCCGTGGATCCCGAGAGTGCAGAGCTCGGGGCAGGG...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGCCCCGAGAGCCCACCTaGCCTGTGCCAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGPREPT*PVPVSQ
Trigger: CTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGG...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR TCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGCCCGGGACACGTTCCTaGGGGGAGGGCCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGPGTRS*GEGPAP
Trigger: GGGAGCCGGGCCCTCCCCTCAGGAACGTGTCCCGGG...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR GCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGAGCCCGATCAGGTCCTaGACCCTGGCGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGSPIRS*TLALAI
Trigger: AATGGCCAGCGCCAGGGTGCAGGACCTGATCGGGCT...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGGCATTGAAGGTGGCTaGGCGGCACGTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGGIEGG*AARGSS
Trigger: AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCC...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR TCA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGTGTGGCCAGAGGCGTaGTGTCAGGGGCATCTGATC +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGVWPEA*CQGHLI
Trigger: GATCAGATGCCCCTGACACCACGCCTCTGGCCACAC...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCCCGGGACACGTTCCTaGGGGGAGGGCCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLPGTRS*GEGPAP
Trigger: GGGAGCCGGGCCCTCCCCTCAGGAACGTGTCCCGGG...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGCTGGCAGGCAGGCTCTaGGCTACGGAACAGATTGAG +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGLAGRL*ATEQIE
Trigger: CTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAG...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR TCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCAATGCAGGTCCTCAGTaGAACACCGGTCCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLNAGPQ*NTGPRP
Trigger: GGGCCGGGGACCGGTGTTTCACTGAGGACCTGCATT...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCGCTGGGAGTGCAGCGTaGCTGAGGACCAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLAGSAA*LRTSHR
Trigger: GCGGTGGCTGGTCCTCAGGCACGCTGCACTCCCAGC...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTACCGGTCCCCGGCCCTaGCTGGGGACAGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGTGPRP*LGTVRT
Trigger: TGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGT...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCGCTCACCCCTCTCCCTaGAACGTGAGAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGAHPSP*NVRNSS
Trigger: GCTGCTGTTTCTCACGTTTCAGGGAGAGGGGTGAGC...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAATGCAGGTCCTCAGTaGAACACCGGTCCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SSGRVAGIEGGWAARGSSNAGPQ*NTGPRP
Trigger: GGGCCGGGGACCGGTGTTTCACTGAGGACCTGCATT...AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGCCCCGAGAGCCCACCTaGCCTGTGCCAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWPREPT*PVPVSQ
Trigger: CTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGG...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR GCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCTGGGAGTGCAGCGTaGCTGAGGACCAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWAGSAA*LRTSHR
Trigger: GCGGTGGCTGGTCCTCAGGCACGCTGCACTCCCAGC...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCATGTCTGGCTGGGAGTaGAGCGTGCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLMSGWE*SVPEDQ
Trigger: CTGGTCCTCAGGCACGCTGCACTCCCAGCCAGACAT...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCGAAGCAGAGAACATaGAGGTGGAACTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGAKQRT*RWNCQL
Trigger: CAGCTGGCAGTTCCACCTGCATGTTCTCTGCTTCGC...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCGAGGCTGTCGAGGACTaGAGAGGCATCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLEAVED*RGIWCG
Trigger: GCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTC...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCCTGCACCCTGGCGCTaGCCATTGTCACCACGGTCA +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGPAPWR*PLSPRS
Trigger: TGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAGG...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCAACCGGTCCCCGGCCCTaGCTGGGGACAGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAATGPRP*LGTVRT
Trigger: TGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGT...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGGGCCGAGGCACGGTaGACAGCCACAGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLWAEAR*TATADS
Trigger: GCTGTCTGCTGTGGCTGTCCACCGTGCCTCGGCCCA...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR TCA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCTATACTGCCAGCAGATaGGCCCGATCAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGYTASR*ARSGPA
Trigger: TGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATA...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCCGCAGGAGGGACACTaGAGAGGCTGTCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDPQEGH*RGCRGL
Trigger: CAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGCGG...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCCCCTGCCCCGAGCTCTaGACTCTCGGGATCCACGGG +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAPCPEL*TLGIHG
Trigger: CCCGTGGATCCCGAGAGTGCAGAGCTCGGGGCAGGG...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCAGCCCGATCAGGTCCTaGACCCTGGCGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTSPIRS*TLALAI
Trigger: AATGGCCAGCGCCAGGGTGCAGGACCTGATCGGGCT...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCGGAGGCCAGTGTCACTaGTGCCCGGATTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLGGQCH*CPDFFS
Trigger: GGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCC...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR GCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCACCCCGAGAGCCCACCTaGCCTGTGCCAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SVKHRSPALAGDSKDITAPREPT*PVPVSQ
Trigger: CTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGG...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTATGTCTGGCTGGGAGTaGAGCGTGCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: SSGRVAGIEGGWAARGSSMSGWE*SVPEDQ
Trigger: CTGGTCCTCAGGCACGCTGCACTCCCAGCCAGACAT...AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCGGCAGCAGTCTGTCCTaGCTCGAGTGCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLGSSLS*LECRGR
Trigger: CCTCCCTCTGCACTCGAGCCAGGACAGACTGCTGCC...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCGGCTCCTCTAGGGGGTaGTCTGACCCCCAAGCATCG +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGGSSRG*SDPQAS
Trigger: CGATGCTTGGGGGTCAGACCACCCCCTAGAGGAGCC...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp TCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTCATCCTCGGGCAGGGTaGCAGGCATTGAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSGRVAGIEGGWAARGSSHPRAG*QALKVA
Trigger: AGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATG...AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCGGAAAGACCATGTCTaGCTGGGAGTGCAGCGTGCC +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGRKDHV*LGVQRA
Trigger: GGCACGCTGCACTCCCAGCCAGACATGGTCTTTCCG...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTGTGTGGCCAGAGGCGTaGTGTCAGGGGCATCTGATC +
Preference number: 4 (lower is better)
Translates to: SSGRVAGIEGGWAARGSSVWPEA*CQGHLI
Trigger: GATCAGATGCCCCTGACACCACGCCTCTGGCCACAC...AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGACCGGTCCCCGGCCCTaGCTGGGGACAGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWTGPRP*LGTVRT
Trigger: TGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGT...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATCCCGGGACACGTTCCTaGGGGGAGGGCCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHPGTRS*GEGPAP
Trigger: GGGAGCCGGGCCCTCCCCTCAGGAACGTGTCCCGGG...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCTATACTGCCAGCAGATaGGCCCGATCAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLYTASR*ARSGPA
Trigger: TGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATA...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGTGTCAGACCAGGAGATaGGTACTTTTCAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGCQTRR*VLFNQG
Trigger: GCCCTGGTTGAAAAGTACTCATCTCCTGGTCTGACA...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCAACCCCGTCTGCCCTTaGACTGTTCTCGCGGACCAG +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLNPVCP*TVLADQ
Trigger: CTGGTCCGCGAGAACAGTTCAAGGGCAGACGGGGTT...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR TCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTAGCTTTCCGCCTGCTTaGAAAAGGAGGCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGSFPPA*KRRQAL
Trigger: CAGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCT...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGCCGCAGGAGGGACACTaGAGAGGCTGTCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGPQEGH*RGCRGL
Trigger: CAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGCGG...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACAATGCAGGTCCTCAGTaGAACACCGGTCCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDNAGPQ*NTGPRP
Trigger: GGGCCGGGGACCGGTGTTTCACTGAGGACCTGCATT...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCCCTGCCCCGAGCTCTaGACTCTCGGGATCCACGGG +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLPCPEL*TLGIHG
Trigger: CCCGTGGATCCCGAGAGTGCAGAGCTCGGGGCAGGG...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGAGCCCGATCAGGTCCTaGACCCTGGCGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: TSGHRVDSRALGPGRQALSPIRS*TLALAI
Trigger: AATGGCCAGCGCCAGGGTGCAGGACCTGATCGGGCT...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR GCA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCCTTCGCTTGTATACTaGCAGCAGATGAGCCCGATC +
Preference number: 4 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGPSLVY*QQMSPI
Trigger: GATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGG...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR GCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCTCTGGCTCTCCAAAGTaGTGTCCAGGTCAACGGCGA +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLSGSPK*CPGQRR
Trigger: TCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGA...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACGAGGCTGTCGAGGACTaGAGAGGCATCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDEAVED*RGIWCG
Trigger: GCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTC...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGGCAGCAGTCTGTCCTaGCTCGAGTGCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWGSSLS*LECRGR
Trigger: CCTCCCTCTGCACTCGAGCCAGGACAGACTGCTGCC...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCTGTCACCACGGTCATTaGCAGCAGTCTGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLCHHGH*QQSVLA
Trigger: AGCCAGGACAGACTGCTGCCAATGACCGTGGTGACA...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCCAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAAQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGGGCATTGAAGGTGGCTaGGCGGCACGTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGGIEGG*AARGSS
Trigger: AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCC...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACATCCTCGGGCAGGGTaGCAGGCATTGAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAAHPRAG*QALKVA
Trigger: AGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATG...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCATCCTCGGGCAGGGTaGCAGGCATTGAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDHPRAG*QALKVA
Trigger: AGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATG...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTTGTCCACGCAGCTCCTaGGCTCTGAGGTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGCPRSS*ALRSEA
Trigger: AGCTTCTGACCTCAGAGCCCAGGAGCTGCGTGGACA...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTGAGGAATGGGGAATGTaGCCCCTTCCAAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGEEWGM*PLPRQR
Trigger: TCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCGTGTGGCCAGAGGCGTaGTGTCAGGGGCATCTGATC +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLVWPEA*CQGHLI
Trigger: GATCAGATGCCCCTGACACCACGCCTCTGGCCACAC...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCAGAGGCATCTGGTGTaGCCAGAGGCGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDQRHLV*PEAWCQ
Trigger: CTGACACCACGCCTCTGGCCACACCAGATGCCTCTG...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCCAGAGGCATCTGGTGTaGCCAGAGGCGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLQRHLV*PEAWCQ
Trigger: CTGACACCACGCCTCTGGCCACACCAGATGCCTCTG...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGCCAGGGCCAAAGTACTaGAGCCAAACTTATGAATGG +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGPGPKY*SQTYEW
Trigger: CCATTCATAAGTTTGGCTTCAGTACTTTGGCCCTGG...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTTTCTCCAGGCGGTACTaGGGGCCTGAAACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGFSRRY*GPETFW
Trigger: CCAGAAAGTTTCAGGCCCTCAGTACCGCCTGGAGAA...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCGCTGTACGTCGGTTGTaGATCGCAGTCTGTGGATCA +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLAVRRL*IAVCGS
Trigger: TGATCCACAGACTGCGATTCACAACCGACGTACAGC...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR TCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR TCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR TCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACAGCTTTCCGCCTGCTTaGAAAAGGAGGCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDSFPPA*KRRQAL
Trigger: CAGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCT...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACGCTCACCCCTCTCCCTaGAACGTGAGAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDAHPSP*NVRNSS
Trigger: GCTGCTGTTTCTCACGTTTCAGGGAGAGGGGTGAGC...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCAGCTCACCCCTCTCCCTaGAACGTGAGAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAAAHPSP*NVRNSS
Trigger: GCTGCTGTTTCTCACGTTTCAGGGAGAGGGGTGAGC...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCCCGCAGGAGGGACACTaGAGAGGCTGTCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAPQEGH*RGCRGL
Trigger: CAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGCGG...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACGGAGGCCAGTGTCACTaGTGCCCGGATTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDGGQCH*CPDFFS
Trigger: GGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCC...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR GCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCAGCAGCTTTCCGCCTaGTTGAAAAAGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGQQLSA*LKKEAG
Trigger: GCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTGCTG...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGAGGCTGTCGAGGACTaGAGAGGCATCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWEAVED*RGIWCG
Trigger: GCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTC...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTTGTCACCACGGTCATTaGCAGCAGTCTGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SSGRVAGIEGGWAARGSSCHHGH*QQSVLA
Trigger: AGCCAGGACAGACTGCTGCCAATGACCGTGGTGACA...AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCAGGTCAACGGCGACATTaGGCTCGCTCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAAGQRRH*ARSASP
Trigger: TGGAGAAGCAGAGCGAGCCCAATGTCGCCGTTGACC...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCAAAGACCATGTCTGGCTaGGAGTGCAGCGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAAKTMSG*ECSVPE
Trigger: CTCAGGCACGCTGCACTCCCAGCCAGACATGGTCTT...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGGACTGCAGAGGCATCTaGTGTGGCCAGAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGDCRGI*CGQRRG
Trigger: ACCACGCCTCTGGCCACACCAGATGCCTCTGCAGTC...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCAGAGAACGTTCTGTaGAGCACTTGTGTTTGGACT +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGAENVL*STCVWT
Trigger: AGTCCAAACACAAGTGCTCCACAGAACGTTCTCTGC...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR TCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGCTGGCAGGCAGGCTCTaGGCTACGGAACAGATTGAG +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGLAGRL*ATEQIE
Trigger: CTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAG...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR TCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCTCACCCCTCTCCCTaGAACGTGAGAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWAHPSP*NVRNSS
Trigger: GCTGCTGTTTCTCACGTTTCAGGGAGAGGGGTGAGC...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCAGCCCGATCAGGTCCTaGACCCTGGCGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPSPIRS*TLALAI
Trigger: AATGGCCAGCGCCAGGGTGCAGGACCTGATCGGGCT...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR GCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCCTTCGCTTGTATACTaGCAGCAGATGAGCCCGATC +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGPSLVY*QQMSPI
Trigger: GATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGG...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCGGCCAGTGTCACTGCTaGCCGGATTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTGQCHC*PDFFSF
Trigger: GAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCC...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR GCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCGGCCAGTGTCACTGCTaGCCGGATTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLGQCHC*PDFFSF
Trigger: GAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCC...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR GCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGGAGGCCAGTGTCACTaGTGCCCGGATTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWGGQCH*CPDFFS
Trigger: GGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCC...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR GCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCATGTCTGGCTGGGAGTaGAGCGTGCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAMSGWE*SVPEDQ
Trigger: CTGGTCCTCAGGCACGCTGCACTCCCAGCCAGACAT...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTGGCAGCAGTCTGTCCTaGCTCGAGTGCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPGSSLS*LECRGR
Trigger: CCTCCCTCTGCACTCGAGCCAGGACAGACTGCTGCC...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACTGTCACCACGGTCATTaGCAGCAGTCTGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDCHHGH*QQSVLA
Trigger: AGCCAGGACAGACTGCTGCCAATGACCGTGGTGACA...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCCCTGCACCCTGGCGCTaGCCATTGTCACCACGGTCA +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPPAPWR*PLSPRS
Trigger: TGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAGG...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGCAAAGAGTGACTCTTTaGATGTCAGACCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGQRVTL*MSDQEM
Trigger: CATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTG...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACAACTCCCATGCGCTCTaGCTCTCCAAAGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDNSHAL*LSKVLS
Trigger: GGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTT...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGATTTCTTCTCCTTCTaGAAGCTGAAGCTCGTACGT +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGDFFSF*KLKLVR
Trigger: ACGTACGAGCTTCAGCTTCCAGAAGGAGAAGAAATC...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR CCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCGGCTCCTCTAGGGGGTaGTCTGACCCCCAAGCATCG +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPGSSRG*SDPQAS
Trigger: CGATGCTTGGGGGTCAGACCACCCCCTAGAGGAGCC...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCACATCCTCGGGCAGGGTaGCAGGCATTGAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SVKHRSPALAGDSKDITAHPRAG*QALKVA
Trigger: AGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATG...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCTTGCAAGGAAATGTGTaGGCACGGCTCTGTACATCC +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLLQGNV*ARLCTS
Trigger: GGATGTACAGAGCCGTGCCCACACATTTCCTTGCAA...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCCTCCGCCCCAAAGAATaGTCCATCATACCAACCATG +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLLRPKE*SIIPTM
Trigger: CATGGTTGGTATGATGGACCATTCTTTGGGGCGGAG...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCCAGAGAACATGCAGGTaGAACTGCCAGCTGAAACCT +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLQRTCR*NCQLKP
Trigger: AGGTTTCAGCTGGCAGTTCCACCTGCATGTTCTCTG...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACGAGGAATGGGGAATGTaGCCCCTTCCAAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDEEWGM*PLPRQR
Trigger: TCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGAGGAATGGGGAATGTaGCCCCTTCCAAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWEEWGM*PLPRQR
Trigger: TCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCGACTGCAGAGGCATCTaGTGTGGCCAGAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVADCRGI*CGQRRG
Trigger: ACCACGCCTCTGGCCACACCAGATGCCTCTGCAGTC...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCGTGATGAGCGGAACCTaGGGCTTTTCTCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLVMSGT*GFSLQQ
Trigger: TTGCTGAAGAGAAAAGCCCCAGGTTCCGCTCATCAC...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR TCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCAGCTTCCCTGAATTTCTaGCCCACTGTCTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAAASLNF*PTVSRH
Trigger: ATGCCTGGAGACAGTGGGTCAGAAATTCAGGGAAGC...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTTGTCAGACCAGGAGATaGGTACTTTTCAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGCQTRR*VLFNQG
Trigger: GCCCTGGTTGAAAAGTACTCATCTCCTGGTCTGACA...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCATGCTGACTTTGAATaGCTTGTAATGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGHADFE*LVMVAA
Trigger: AGCAGCCACCATTACAAGTCATTCAAAGTCAGCATG...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCGCTGTACGTCGGTTGTaGATCGCAGTCTGTGGATCA +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGAVRRL*IAVCGS
Trigger: TGATCCACAGACTGCGATTCACAACCGACGTACAGC...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000444226.1
CDS-3UTR TCA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCTTAGTGCTGGCTTTCTaGTTCGTAACAGGGTCTATC +
Preference number: 4 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGLVLAF*FVTGSI
Trigger: GATAGACCCTGTTACGAATCAGAAAGCCAGCACTAA...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTGGTGGAACTGCCAGCTaGAACCTACACTTGCTACTT +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGGGTAS*NLHLLL
Trigger: AAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTCCACC...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGCAGGCAGAACTCCCATaGGCTCTGGCTCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWQAELP*ALALQS
Trigger: ACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTG...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACCAGGCAGAACTCCCATaGGCTCTGGCTCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDQAELP*ALALQS
Trigger: ACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTG...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGCGTGAGTTTAAATATTaGGTGACTGGGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGREFKY*VTGAFL
Trigger: GAGAAAAGCCCCAGTCACGCAATATTTAAACTCACG...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCACCCCGAGAGCCCACCTaGCCTGTGCCAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPPREPT*PVPVSQ
Trigger: CTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGG...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR GCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCCGAGAGCCCACCTaGCCTGTGCCAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSAPREPT*PVPVSQ
Trigger: CTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGG...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR GCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGCTGGGAGTGCAGCGTaGCTGAGGACCAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHAGSAA*LRTSHR
Trigger: GCGGTGGCTGGTCCTCAGGCACGCTGCACTCCCAGC...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTGAGGCTGTCGAGGACTaGAGAGGCATCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPEAVED*RGIWCG
Trigger: GCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTC...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGTGTCACCACGGTCATTaGCAGCAGTCTGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: TSGHRVDSRALGPGRQALCHHGH*QQSVLA
Trigger: AGCCAGGACAGACTGCTGCCAATGACCGTGGTGACA...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGAACTCCCATGCGCTCTaGCTCTCCAAAGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVNSHAL*LSKVLS
Trigger: GGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTT...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR CCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCCATCCTCGGGCAGGGTaGCAGGCATTGAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPHPRAG*QALKVA
Trigger: AGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATG...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCTCTGAGGTCAGAAGCTaGGGTGTGCTGAAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTSEVRS*GVLKGK
Trigger: TTTCCCCTTCAGCACACCCCAGCTTCTGACCTCAGA...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCCGGAAAGACCATGTCTaGCTGGGAGTGCAGCGTGCC +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPRKDHV*LGVQRA
Trigger: GGCACGCTGCACTCCCAGCCAGACATGGTCTTTCCG...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCGGAAAGACCATGTCTaGCTGGGAGTGCAGCGTGCC +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLRKDHV*LGVQRA
Trigger: GGCACGCTGCACTCCCAGCCAGACATGGTCTTTCCG...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCAGAGAACATGCAGGTaGAACTGCCAGCTGAAACCT +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGQRTCR*NCQLKP
Trigger: AGGTTTCAGCTGGCAGTTCCACCTGCATGTTCTCTG...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCGAGGAATGGGGAATGTaGCCCCTTCCAAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAEEWGM*PLPRQR
Trigger: TCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCAGAGGCATCTGGTGTaGCCAGAGGCGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLQRHLV*PEAWCQ
Trigger: CTGACACCACGCCTCTGGCCACACCAGATGCCTCTG...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCGACTGCAGAGGCATCTaGTGTGGCCAGAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLDCRGI*CGQRRG
Trigger: ACCACGCCTCTGGCCACACCAGATGCCTCTGCAGTC...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTACCGGTCCCCGGCCCTaGCTGGGGACAGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGTGPRP*LGTVRT
Trigger: TGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGT...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTACTGTCTCCAGGCATTaGAGGAGGATGAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGTVSRH*RRMNLL
Trigger: GAGAAGATTCATCCTCCTTCAATGCCTGGAGACAGT...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGGCTTCCCTGAATTTCTaGCCCACTGTCTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGASLNF*PTVSRH
Trigger: ATGCCTGGAGACAGTGGGTCAGAAATTCAGGGAAGC...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCTATACTGCCAGCAGATaGGCCCGATCAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAYTASR*ARSGPA
Trigger: TGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATA...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCTATTCGAACAAAGAGTaGCTCTTTGGATGTCAGACC +
Preference number: 4 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGYSNKE*LFGCQT
Trigger: GGTCTGACATCCAAAGAGTCACTCTTTGTTCGAATA...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCCATGCTGACTTTGAATaGCTTGTAATGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLHADFE*LVMVAA
Trigger: AGCAGCCACCATTACAAGTCATTCAAAGTCAGCATG...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCTGTACGTCGGTTGTaGATCGCAGTCTGTGGATCA +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWAVRRL*IAVCGS
Trigger: TGATCCACAGACTGCGATTCACAACCGACGTACAGC...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000444226.1
CDS-3UTR TCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCTCCTTCTGGAAGCTaGAGCTCGTACGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGSPSGS*SSYVCS
Trigger: TGAACAGACGTACGAGCTTCAGCTTCCAGAAGGAGA...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR TCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCGGTGGAACTGCCAGCTaGAACCTACACTTGCTACTT +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGGGTAS*NLHLLL
Trigger: AAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTCCACC...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCGGTGGAACTGCCAGCTaGAACCTACACTTGCTACTT +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLGGTAS*NLHLLL
Trigger: AAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTCCACC...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCAGCTTTCCGCCTGCTTaGAAAAGGAGGCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLSFPPA*KRRQAL
Trigger: CAGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCT...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GCTGGAGGCCAGTGTCACTGCTGCCCGGATTTCTTCTCCTTCTGGAAGCTGAAGAGCCCGATCAGGTCCTaGACCCTGGCGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: AGGQCHCCPDFFSFWKLKSPIRS*TLALAI
Trigger: AATGGCCAGCGCCAGGGTGCAGGACCTGATCGGGCT...CTTCAGCTTCCAGAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR GCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCATCTGGCTCTCCAAAGTaGTGTCCAGGTCAACGGCGA +
Preference number: 4 (lower is better)
Translates to: SVKHRSPALAGDSKDITASGSPK*CPGQRR
Trigger: TCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGA...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCTCTGGCTCTCCAAAGTaGTGTCCAGGTCAACGGCGA +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVASGSPK*CPGQRR
Trigger: TCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGA...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGCCAGTGTCACTGCTaGCCGGATTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLGQCHC*PDFFSF
Trigger: GAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCC...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR GCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCGGAGGCCAGTGTCACTaGTGCCCGGATTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPGGQCH*CPDFFS
Trigger: GGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCC...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR GCA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTTATCAAAGCCACTaGCAAGCAGACTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVAYQSH*QADFRP
Trigger: GGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGC...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR GCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTACAGCAGCTTTCCGCCTaGTTGAAAAAGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLQQLSA*LKKEAG
Trigger: GCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTGCTG...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCCTGCTTCCCAGAAATTaGAGGCTTCTCTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLLLPRN*RLLFER
Trigger: TCTCTCAAAGAGAAGCCTCCAATTTCTGGGAAGCAG...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCCTGCACCCTGGCGCTaGCCATTGTCACCACGGTCA +
Preference number: 4 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSPAPWR*PLSPRS
Trigger: TGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAGG...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCTGGAGGCCAGTGTCACTGCTGCCCGGATTTCTTCTCCTTCTGGAAGCTGAAGCCTGCACCCTGGCGCTaGCCATTGTCACCACGGTCA +
Preference number: 4 (lower is better)
Translates to: AGGQCHCCPDFFSFWKLKPAPWR*PLSPRS
Trigger: TGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAGG...CTTCAGCTTCCAGAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR CCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTGGTCAACGGCGACATTaGGCTCGCTCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPGQRRH*ARSASP
Trigger: TGGAGAAGCAGAGCGAGCCCAATGTCGCCGTTGACC...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCGGCATTGAAGGTGGCTaGGCGGCACGTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSGIEGG*AARGSS
Trigger: AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCC...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACTCCGCCCCAAAGAATaGTCCATCATACCAACCATG +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAALRPKE*SIIPTM
Trigger: CATGGTTGGTATGATGGACCATTCTTTGGGGCGGAG...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCCTCCGCCCCAAAGAATaGTCCATCATACCAACCATG +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLLRPKE*SIIPTM
Trigger: CATGGTTGGTATGATGGACCATTCTTTGGGGCGGAG...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTAAGACCATGTCTGGCTaGGAGTGCAGCGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPKTMSG*ECSVPE
Trigger: CTCAGGCACGCTGCACTCCCAGCCAGACATGGTCTT...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCAAGACCATGTCTGGCTaGGAGTGCAGCGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLKTMSG*ECSVPE
Trigger: CTCAGGCACGCTGCACTCCCAGCCAGACATGGTCTT...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCACCCGGGACACGTTCCTaGGGGGAGGGCCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPPGTRS*GEGPAP
Trigger: GGGAGCCGGGCCCTCCCCTCAGGAACGTGTCCCGGG...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTACGAGCTCACCTACCTaGAGCTGCTTCCACACTACG +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPTSSPT*SCFHTT
Trigger: CGTAGTGTGGAAGCAGCTTCAGGTAGGTGAGCTCGT...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373511.6
CDS-3UTR TCA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCTGTGACTGTCGAATATaGGCTAGAATGATAGTTGGA +
Preference number: 4 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGCDCRI*ARMIVG
Trigger: TCCAACTATCATTCTAGCTCATATTCGACAGTCACA...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCAACTGTCTCCAGGCATTaGAGGAGGATGAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAATVSRH*RRMNLL
Trigger: GAGAAGATTCATCCTCCTTCAATGCCTGGAGACAGT...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCTATACTGCCAGCAGATaGGCCCGATCAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLYTASR*ARSGPA
Trigger: TGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATA...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGAAGCCAAACTTATaGATGGGCTCATTGGAATCC +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGLKPNL*MGSLES
Trigger: GGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAG...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTTCTCCAGGCGGTACTaGGGGCCTGAAACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPFSRRY*GPETFW
Trigger: CCAGAAAGTTTCAGGCCCTCAGTACCGCCTGGAGAA...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCAACCCCGTCTGCCCTTaGACTGTTCTCGCGGACCAG +
Preference number: 4 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSNPVCP*TVLADQ
Trigger: CTGGTCCGCGAGAACAGTTCAAGGGCAGACGGGGTT...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR TCA 90 bp TCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTTTAGTGCTGGCTTTCTaGTTCGTAACAGGGTCTATC +
Preference number: 4 (lower is better)
Translates to: SSGRVAGIEGGWAARGSSLVLAF*FVTGSI
Trigger: GATAGACCCTGTTACGAATCAGAAAGCCAGCACTAA...AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCAGGTCGGAATCGATTaGGATGGGTTTCTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGQVGID*DGFLLN
Trigger: ATTAAGCAGAAACCCATCTCAATCGATTCCGACCTG...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGTCTCCTTCTGGAAGCTaGAGCTCGTACGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TSGHRVDSRALGPGRQALSPSGS*SSYVCS
Trigger: TGAACAGACGTACGAGCTTCAGCTTCCAGAAGGAGA...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR TCA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGGTGGAACTGCCAGCTaGAACCTACACTTGCTACTT +
Preference number: 4 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVGGTAS*NLHLLL
Trigger: AAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTCCACC...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCCCTCTCCCTGAAACGTaGGAAACAGCAGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPPLPET*ETAAFR
Trigger: GCGGAAAGCTGCTGTTTCTCACGTTTCAGGGAGAGG...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTCTCCCTGAAACGTaGGAAACAGCAGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPPLPET*ETAAFR
Trigger: GCGGAAAGCTGCTGTTTCTCACGTTTCAGGGAGAGG...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTGACGCTCCTGTTGGCTaGACAAAGATCAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGDAPVG*TKIRMK
Trigger: TTTCATTCTGATCTTTGTTCAGCCAACAGGAGCGTC...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCCCTGAGTCTCACCATTaGTTCCCTGAATTTCTGACC +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLPESHH*FPEFLT
Trigger: GGTCAGAAATTCAGGGAAGCAATGGTGAGACTCAGG...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR GCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACCTGAGTCTCACCATTaGTTCCCTGAATTTCTGACC +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAAPESHH*FPEFLT
Trigger: GGTCAGAAATTCAGGGAAGCAATGGTGAGACTCAGG...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR GCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGTACCTACATGACCCTTaGCATCAAATTTGGAATACT +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGYLHDP*HQIWNT
Trigger: AGTATTCCAAATTTGATGGCAAGGGTCATGTAGGTA...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCTCTGGCTCTCCAAAGTaGTGTCCAGGTCAACGGCGA +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLSGSPK*CPGQRR
Trigger: TCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGA...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCCAGGCAGAACTCCCATaGGCTCTGGCTCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPQAELP*ALALQS
Trigger: ACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTG...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGATAGCTTTTCCAATCTaGCTGTTCAATATGGGAACA +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGIAFPI*LFNMGT
Trigger: TGTTCCCATATTGAACAGGCAGATTGGAAAAGCTAT...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGTACCCTCGAAGCAAATaGACTCATTTAAACAAATGG +
Preference number: 4 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGYPRSK*THLNKW
Trigger: CCATTTGTTTAAATGAGTGCATTTGCTTCGAGGGTA...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAGCAGTCTGTCCTaGCTCGAGTGCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHGSSLS*LECRGR
Trigger: CCTCCCTCTGCACTCGAGCCAGGACAGACTGCTGCC...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTTGTCACCACGGTCATTaGCAGCAGTCTGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPCHHGH*QQSVLA
Trigger: AGCCAGGACAGACTGCTGCCAATGACCGTGGTGACA...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCTGCACCCTGGCGCTaGCCATTGTCACCACGGTCA +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVPAPWR*PLSPRS
Trigger: TGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAGG...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCAAAGAGTGACTCTTTaGATGTCAGACCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGQRVTL*MSDQEM
Trigger: CATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTG...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCGGGCCTGAAACTTTCTaGGATCCTTTTCTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTGPETF*DPFLRF
Trigger: GAAGCGAAGAAAAGGATCCCAGAAAGTTTCAGGCCC...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACGGGCCTGAAACTTTCTaGGATCCTTTTCTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDGPETF*DPFLRF
Trigger: GAAGCGAAGAAAAGGATCCCAGAAAGTTTCAGGCCC...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTAACTCCCATGCGCTCTaGCTCTCCAAAGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPNSHAL*LSKVLS
Trigger: GGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTT...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCGTGAATCGCAGTCTGTaGATCATGCTGACTTTGAAT +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLVNRSL*IMLTLN
Trigger: ATTCAAAGTCAGCATGATCCACAGACTGCGATTCAC...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR CCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTGGCTCCTCTAGGGGGTaGTCTGACCCCCAAGCATCG +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSAGSSRG*SDPQAS
Trigger: CGATGCTTGGGGGTCAGACCACCCCCTAGAGGAGCC...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCTCCTCTAGGGGGTaGTCTGACCCCCAAGCATCG +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHGSSRG*SDPQAS
Trigger: CGATGCTTGGGGGTCAGACCACCCCCTAGAGGAGCC...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCGGCTCCTCTAGGGGGTaGTCTGACCCCCAAGCATCG +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVGSSRG*SDPQAS
Trigger: CGATGCTTGGGGGTCAGACCACCCCCTAGAGGAGCC...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCATTGAAGGTGGCTaGGCGGCACGTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHGIEGG*AARGSS
Trigger: AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCC...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGCTCCGCCCCAAAGAATaGTCCATCATACCAACCATG +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGLRPKE*SIIPTM
Trigger: CATGGTTGGTATGATGGACCATTCTTTGGGGCGGAG...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCATCTGAGGTCAGAAGCTaGGGTGTGCTGAAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SVKHRSPALAGDSKDITASEVRS*GVLKGK
Trigger: TTTCCCCTTCAGCACACCCCAGCTTCTGACCTCAGA...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGCAGAGAACATGCAGGTaGAACTGCCAGCTGAAACCT +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWQRTCR*NCQLKP
Trigger: AGGTTTCAGCTGGCAGTTCCACCTGCATGTTCTCTG...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACGGCATTGAAGGAGGATaGATCTTCTCTAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDGIEGG*IFSRST
Trigger: TGTTGACCTAGAGAAGATTCATCCTCCTTCAATGCC...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCGGCATTGAAGGAGGATaGATCTTCTCTAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTGIEGG*IFSRST
Trigger: TGTTGACCTAGAGAAGATTCATCCTCCTTCAATGCC...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACACTGTCTCCAGGCATTaGAGGAGGATGAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDTVSRH*RRMNLL
Trigger: GAGAAGATTCATCCTCCTTCAATGCCTGGAGACAGT...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGCCAGGGCCAAAGTACTaGAGCCAAACTTATGAATGG +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGPGPKY*SQTYEW
Trigger: CCATTCATAAGTTTGGCTTCAGTACTTTGGCCCTGG...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCTGTCAGACCAGGAGATaGGTACTTTTCAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVACQTRR*VLFNQG
Trigger: GCCCTGGTTGAAAAGTACTCATCTCCTGGTCTGACA...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTATGTCAGACCAGGAGATaGGTACTTTTCAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLCQTRR*VLFNQG
Trigger: GCCCTGGTTGAAAAGTACTCATCTCCTGGTCTGACA...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCATAAGGGAGAATCCATaGGCAGCATTTATTCGAACA +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLIRENP*AAFIRT
Trigger: TGTTCGAATAAATGCTGCTCATGGATTCTCCCTTAT...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCGCGGTACTGAGGGCCTaGAACTTTCTGGGATCCTTT +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPAVLRA*NFLGSF
Trigger: AAAGGATCCCAGAAAGTTTCAGGCCCTCAGTACCGC...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCCATGCTGACTTTGAATaGCTTGTAATGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTHADFE*LVMVAA
Trigger: AGCAGCCACCATTACAAGTCATTCAAAGTCAGCATG...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR TCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCGCTGTACGTCGGTTGTaGATCGCAGTCTGTGGATCA +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLAVRRL*IAVCGS
Trigger: TGATCCACAGACTGCGATTCACAACCGACGTACAGC...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR TCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCTCTCCTTCTGGAAGCTaGAGCTCGTACGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVASPSGS*SSYVCS
Trigger: TGAACAGACGTACGAGCTTCAGCTTCCAGAAGGAGA...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGCAGTGCTAGCTCGCGATTCCAGGATGTAGTTAACCTTGAGCACAATTTCATTCCTGCCCTGTGCCAGTaGGCCAGGGGCTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GSASSRFQDVVNLEHNFIPALCQ*ARGWPP
Trigger: GGGAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGG...AATGAAATTGTGCTCAAGGTTAACTACATCCTGGAATCGCGAGCTAGCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR TCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGTGGAACTGCCAGCTaGAACCTACACTTGCTACTT +
Preference number: 4 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLGGTAS*NLHLLL
Trigger: AAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTCCACC...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCAGCTTTCCGCCTGCTTaGAAAAGGAGGCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSSFPPA*KRRQAL
Trigger: CAGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCT...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCACCGCAGGAGGGACACTaGAGAGGCTGTCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPPQEGH*RGCRGL
Trigger: CAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGCGG...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCGACGCTCCTGTTGGCTaGACAAAGATCAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLDAPVG*TKIRMK
Trigger: TTTCATTCTGATCTTTGTTCAGCCAACAGGAGCGTC...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGCCTGAGTCTCACCATTaGTTCCCTGAATTTCTGACC +
Preference number: 4 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVPESHH*FPEFLT
Trigger: GGTCAGAAATTCAGGGAAGCAATGGTGAGACTCAGG...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR GCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCGCTTATCAAAGCCACTaGCAAGCAGACTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLAYQSH*QADFRP
Trigger: GGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGC...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR GCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCGCTTATCAAAGCCACTaGCAAGCAGACTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPAYQSH*QADFRP
Trigger: GGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGC...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR GCA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCATAGCTTTTCCAATCTaGCTGTTCAATATGGGAACA +
Preference number: 4 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGIAFPI*LFNMGT
Trigger: TGTTCCCATATTGAACAGGCAGATTGGAAAAGCTAT...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCTACCCTCGAAGCAAATaGACTCATTTAAACAAATGG +
Preference number: 4 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGYPRSK*THLNKW
Trigger: CCATTTGTTTAAATGAGTGCATTTGCTTCGAGGGTA...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCATGTCTGGCTGGGAGTaGAGCGTGCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVMSGWE*SVPEDQ
Trigger: CTGGTCCTCAGGCACGCTGCACTCCCAGCCAGACAT...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCACTCAGCTTTAAGATaGTGTTTTAGACACATCTCT +
Preference number: 4 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGHSALR*CFRHIS
Trigger: AGAGATGTGTCTAAAACAGCATCTTAAAGCTGAGTG...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCAGTGACTTTAACTCCTaGGCTGATTGCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGSDFNS*ADCLEF
Trigger: AAATTCTAAGCAATCAGCCCAGGAGTTAAAGTCACT...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
CDS-3UTR CCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCCTGCTTCCCAGAAATTaGAGGCTTCTCTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTLLPRN*RLLFER
Trigger: TCTCTCAAAGAGAAGCCTCCAATTTCTGGGAAGCAG...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCCTGCTTCCCAGAAATTaGAGGCTTCTCTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLLLPRN*RLLFER
Trigger: TCTCTCAAAGAGAAGCCTCCAATTTCTGGGAAGCAG...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCAGACATCGATCTTCTTaGTTGCTGTTGTACCTACAT +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLRHRSS*LLLYLH
Trigger: ATGTAGGTACAACAGCAACCAAGAAGATCGATGTCT...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGGCAGCAGTCTGTCCTaGCTCGAGTGCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPGSSLS*LECRGR
Trigger: CCTCCCTCTGCACTCGAGCCAGGACAGACTGCTGCC...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCCAAAGAGTGACTCTTTaGATGTCAGACCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTQRVTL*MSDQEM
Trigger: CATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTG...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCCAAAGAGTGACTCTTTaGATGTCAGACCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGQRVTL*MSDQEM
Trigger: CATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTG...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCCAAAGAGTGACTCTTTaGATGTCAGACCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLQRVTL*MSDQEM
Trigger: CATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTG...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGGGGCCTGAAACTTTCTaGGATCCTTTTCTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGGPETF*DPFLRF
Trigger: GAAGCGAAGAAAAGGATCCCAGAAAGTTTCAGGCCC...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
58% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCGATTTCTTCTCCTTCTaGAAGCTGAAGCTCGTACGT +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTDFFSF*KLKLVR
Trigger: ACGTACGAGCTTCAGCTTCCAGAAGGAGAAGAAATC...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCACAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGGCTCCTCTAGGGGGTaGTCTGACCCCCAAGCATCG +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPGSSRG*SDPQAS
Trigger: CGATGCTTGGGGGTCAGACCACCCCCTAGAGGAGCC...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCACTCCGCCCCAAAGAATaGTCCATCATACCAACCATG +
Preference number: 4 (lower is better)
Translates to: SVKHRSPALAGDSKDITALRPKE*SIIPTM
Trigger: CATGGTTGGTATGATGGACCATTCTTTGGGGCGGAG...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCTCTGAGGTCAGAAGCTaGGGTGTGCTGAAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLSEVRS*GVLKGK
Trigger: TTTCCCCTTCAGCACACCCCAGCTTCTGACCTCAGA...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTTCTGAGGTCAGAAGCTaGGGTGTGCTGAAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPSEVRS*GVLKGK
Trigger: TTTCCCCTTCAGCACACCCCAGCTTCTGACCTCAGA...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCGTGTGGCCAGAGGCGTaGTGTCAGGGGCATCTGATC +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVVWPEA*CQGHLI
Trigger: GATCAGATGCCCCTGACACCACGCCTCTGGCCACAC...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCGACTGCAGAGGCATCTaGTGTGGCCAGAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVDCRGI*CGQRRG
Trigger: ACCACGCCTCTGGCCACACCAGATGCCTCTGCAGTC...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTTCTAGGTCAACATCATaGTCAATGAGAACCATCTCA +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGSRSTS*SMRTIS
Trigger: TGAGATGGTTCTCATTGATCATGATGTTGACCTAGA...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGGCATTGAAGGAGGATaGATCTTCTCTAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVGIEGG*IFSRST
Trigger: TGTTGACCTAGAGAAGATTCATCCTCCTTCAATGCC...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGGGCATTGAAGGAGGATaGATCTTCTCTAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: TSGHRVDSRALGPGRQALGIEGG*IFSRST
Trigger: TGTTGACCTAGAGAAGATTCATCCTCCTTCAATGCC...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCAAGTCGTTCTAATCTTTaGGCTGTGTTTGAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAASRSNL*AVFERL
Trigger: AAGACGCTCAAACACAGCTCAAAGATTAGAACGACT...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGCTGAAGCCAAACTTATaGATGGGCTCATTGGAATCC +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWLKPNL*MGSLES
Trigger: GGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAG...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGCTGAAGCCAAACTTATaGATGGGCTCATTGGAATCC +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGLKPNL*MGSLES
Trigger: GGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAG...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTACCAGGGCCAAAGTACTaGAGCCAAACTTATGAATGG +
Preference number: 4 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLPGPKY*SQTYEW
Trigger: CCATTCATAAGTTTGGCTTCAGTACTTTGGCCCTGG...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCTATTCGAACAAAGAGTaGCTCTTTGGATGTCAGACC +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTYSNKE*LFGCQT
Trigger: GGTCTGACATCCAAAGAGTCACTCTTTGTTCGAATA...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGCAGGTCGGAATCGATTaGGATGGGTTTCTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGQVGID*DGFLLN
Trigger: ATTAAGCAGAAACCCATCTCAATCGATTCCGACCTG...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCAAGCTTTCCGCCTGCTTaGAAAAGGAGGCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPSFPPA*KRRQAL
Trigger: CAGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCT...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCAGCTTTCCGCCTGCTTaGAAAAGGAGGCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVSFPPA*KRRQAL
Trigger: CAGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCT...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCCTCTCCCTGAAACGTaGGAAACAGCAGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSPLPET*ETAAFR
Trigger: GCGGAAAGCTGCTGTTTCTCACGTTTCAGGGAGAGG...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCAGCTCACCCCTCTCCCTaGAACGTGAGAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPAHPSP*NVRNSS
Trigger: GCTGCTGTTTCTCACGTTTCAGGGAGAGGGGTGAGC...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGACGCTCCTGTTGGCTaGACAAAGATCAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWDAPVG*TKIRMK
Trigger: TTTCATTCTGATCTTTGTTCAGCCAACAGGAGCGTC...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCCCCTGCCCCGAGCTCTaGACTCTCGGGATCCACGGG +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPPCPEL*TLGIHG
Trigger: CCCGTGGATCCCGAGAGTGCAGAGCTCGGGGCAGGG...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCCCTGAGTCTCACCATTaGTTCCCTGAATTTCTGACC +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAPESHH*FPEFLT
Trigger: GGTCAGAAATTCAGGGAAGCAATGGTGAGACTCAGG...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR GCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCAACAGATAATATCGACTaGTTCCCAGAAATTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAATDNID*FPEIGG
Trigger: GCCTCCAATTTCTGGGAAGCAGTCGATATTATCTGT...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCACAGATAATATCGACTaGTTCCCAGAAATTGGAGGC +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGTDNID*FPEIGG
Trigger: GCCTCCAATTTCTGGGAAGCAGTCGATATTATCTGT...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCGTGGCTATGTCAATTTaGGAATCCTCCTCAAAAACC +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGVAMSI*ESSSKT
Trigger: GGTTTTTGAGGAGGATTCGCAAATTGACATAGCCAC...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR GCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCCGTGAGTTTAAATATTaGGTGACTGGGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGREFKY*VTGAFL
Trigger: GAGAAAAGCCCCAGTCACGCAATATTTAAACTCACG...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTGGCCAGTGTCACTGCTaGCCGGATTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGGQCHC*PDFFSF
Trigger: GAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCC...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGAGGCCAGTGTCACTaGTGCCCGGATTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHGGQCH*CPDFFS
Trigger: GGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCC...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR GCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTGGAGGCCAGTGTCACTaGTGCCCGGATTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSAGGQCH*CPDFFS
Trigger: GGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCC...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR GCA 90 bp GAGGGCAGAGAACGTTCTGTGGAGCACTTGTGTTTGGACTTGAACAATGACACACCCCGAGAGCCCACCTaGCCTGTGCCAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EGRERSVEHLCLDLNNDTPREPT*PVPVSQ
Trigger: CTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGG...TGTGTCATTGTTCAAGTCCAAACACAAGTGCTCCACAGAACGTTCTCTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR GCA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCATAGCTTTTCCAATCTaGCTGTTCAATATGGGAACA +
Preference number: 4 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLIAFPI*LFNMGT
Trigger: TGTTCCCATATTGAACAGGCAGATTGGAAAAGCTAT...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCGCTGGGAGTGCAGCGTaGCTGAGGACCAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPAGSAA*LRTSHR
Trigger: GCGGTGGCTGGTCCTCAGGCACGCTGCACTCCCAGC...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAATGTCTGGCTGGGAGTaGAGCGTGCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPMSGWE*SVPEDQ
Trigger: CTGGTCCTCAGGCACGCTGCACTCCCAGCCAGACAT...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCAGCAGCTTTCCGCCTaGTTGAAAAAGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSQQLSA*LKKEAG
Trigger: GCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTGCTG...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGAGCCAAACTTATGAATaGGCTCATTGGAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWSQTYE*AHWNPA
Trigger: CGCTGGATTCCAATGAGCCCATTCATAAGTTTGGCT...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGAGCCAAACTTATGAATaGGCTCATTGGAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGSQTYE*AHWNPA
Trigger: CGCTGGATTCCAATGAGCCCATTCATAAGTTTGGCT...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGTCAACGGCGACATTaGGCTCGCTCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHGQRRH*ARSASP
Trigger: TGGAGAAGCAGAGCGAGCCCAATGTCGCCGTTGACC...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTGGTCAACGGCGACATTaGGCTCGCTCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSAGQRRH*ARSASP
Trigger: TGGAGAAGCAGAGCGAGCCCAATGTCGCCGTTGACC...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTGCATATCCTGTACTGTaGCTATGTCAATTTGCGAAT +
Preference number: 4 (lower is better)
Translates to: SSGRVAGIEGGWAARGSSAYPVL*LCQFAN
Trigger: ATTCGCAAATTGACATAGCCACAGTACAGGATATGC...AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCGTGAATCGCAGTCTGTaGATCATGCTGACTTTGAAT +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLVNRSL*IMLTLN
Trigger: ATTCAAAGTCAGCATGATCCACAGACTGCGATTCAC...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR CCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGGATTTCTTCTCCTTCTaGAAGCTGAAGCTCGTACGT +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGDFFSF*KLKLVR
Trigger: ACGTACGAGCTTCAGCTTCCAGAAGGAGAAGAAATC...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR CCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCACATCCTCGGGCAGGGTaGCAGGCATTGAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPHPRAG*QALKVA
Trigger: AGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATG...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCCTCCGCCCCAAAGAATaGTCCATCATACCAACCATG +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPLRPKE*SIIPTM
Trigger: CATGGTTGGTATGATGGACCATTCTTTGGGGCGGAG...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATTGTCCACGCAGCTCCTaGGCTCTGAGGTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHCPRSS*ALRSEA
Trigger: AGCTTCTGACCTCAGAGCCCAGGAGCTGCGTGGACA...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCTGTCCACGCAGCTCCTaGGCTCTGAGGTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVCPRSS*ALRSEA
Trigger: AGCTTCTGACCTCAGAGCCCAGGAGCTGCGTGGACA...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTTGTCCACGCAGCTCCTaGGCTCTGAGGTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSACPRSS*ALRSEA
Trigger: AGCTTCTGACCTCAGAGCCCAGGAGCTGCGTGGACA...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCAAAGACCATGTCTGGCTaGGAGTGCAGCGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPKTMSG*ECSVPE
Trigger: CTCAGGCACGCTGCACTCCCAGCCAGACATGGTCTT...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCACGGAAAGACCATGTCTaGCTGGGAGTGCAGCGTGCC +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPRKDHV*LGVQRA
Trigger: GGCACGCTGCACTCCCAGCCAGACATGGTCTTTCCG...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCAGAGAACATGCAGGTaGAACTGCCAGCTGAAACCT +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPQRTCR*NCQLKP
Trigger: AGGTTTCAGCTGGCAGTTCCACCTGCATGTTCTCTG...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCGAGGAATGGGGAATGTaGCCCCTTCCAAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVEEWGM*PLPRQR
Trigger: TCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCAGAGGAATGGGGAATGTaGCCCCTTCCAAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPEEWGM*PLPRQR
Trigger: TCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTGCTTCCCTGAATTTCTaGCCCACTGTCTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGASLNF*PTVSRH
Trigger: ATGCCTGGAGACAGTGGGTCAGAAATTCAGGGAAGC...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTCTTTGAGCTGTGTTTaGGCGTCTTCTAATACCAAA +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLSLSCV*ASSNTK
Trigger: TTTGGTATTAGAAGACGCTCAAACACAGCTCAAAGA...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCTTTGAGCTGTGTTTaGGCGTCTTCTAATACCAAA +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGSLSCV*ASSNTK
Trigger: TTTGGTATTAGAAGACGCTCAAACACAGCTCAAAGA...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATATACTGCCAGCAGATaGGCCCGATCAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPYTASR*ARSGPA
Trigger: TGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATA...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCCTGAAGCCAAACTTATaGATGGGCTCATTGGAATCC +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVALKPNL*MGSLES
Trigger: GGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAG...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACATAAGGGAGAATCCATaGGCAGCATTTATTCGAACA +
Preference number: 4 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDIRENP*AAFIRT
Trigger: TGTTCGAATAAATGCTGCTCATGGATTCTCCCTTAT...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCATAAGGGAGAATCCATaGGCAGCATTTATTCGAACA +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLIRENP*AAFIRT
Trigger: TGTTCGAATAAATGCTGCTCATGGATTCTCCCTTAT...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTTTCTCCAGGCGGTACTaGGGGCCTGAAACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSAFSRRY*GPETFW
Trigger: CCAGAAAGTTTCAGGCCCTCAGTACCGCCTGGAGAA...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCCATGCTGACTTTGAATaGCTTGTAATGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAHADFE*LVMVAA
Trigger: AGCAGCCACCATTACAAGTCATTCAAAGTCAGCATG...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR TCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTGCTGTACGTCGGTTGTaGATCGCAGTCTGTGGATCA +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGAVRRL*IAVCGS
Trigger: TGATCCACAGACTGCGATTCACAACCGACGTACAGC...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR TCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCAGTTTAAATATTGCGTaGCTGGGGCTTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTSLNIA*LGLFSS
Trigger: TGAAGAGAAAAGCCCCAGTCACGCAATATTTAAACT...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCACTGGCAGGCAGGCTCTaGGCTACGGAACAGATTGAG +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPLAGRL*ATEQIE
Trigger: CTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAG...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR TCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCGACGCTCCTGTTGGCTaGACAAAGATCAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVADAPVG*TKIRMK
Trigger: TTTCATTCTGATCTTTGTTCAGCCAACAGGAGCGTC...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCACCCTGCCCCGAGCTCTaGACTCTCGGGATCCACGGG +
Preference number: 4 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPPCPEL*TLGIHG
Trigger: CCCGTGGATCCCGAGAGTGCAGAGCTCGGGGCAGGG...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR GCA 90 bp TCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAACTCCTGGGCTGATTaGTTAGAATTTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SSGRVAGIEGGWAARGSSNSWAD*LEFLSF
Trigger: GAAAGAAAGAAATTCTAAGCAATCAGCCCAGGAGTT...AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
CDS-3UTR GCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTCCTTCGCTTGTATACTaGCAGCAGATGAGCCCGATC +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGPSLVY*QQMSPI
Trigger: GATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGG...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCACAGGCAGAACTCCCATaGGCTCTGGCTCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPQAELP*ALALQS
Trigger: ACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTG...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGTGGCTATGTCAATTTaGGAATCCTCCTCAAAAACC +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWVAMSI*ESSSKT
Trigger: GGTTTTTGAGGAGGATTCGCAAATTGACATAGCCAC...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR GCA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGCGTGAGTTTAAATATTaGGTGACTGGGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TSGHRVDSRALGPGRQALREFKY*VTGAFL
Trigger: GAGAAAAGCCCCAGTCACGCAATATTTAAACTCACG...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCAGGCCAGTGTCACTGCTaGCCGGATTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPGQCHC*PDFFSF
Trigger: GAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCC...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR GCA 90 bp GCTGGAGGCCAGTGTCACTGCTGCCCGGATTTCTTCTCCTTCTGGAAGCTGAAGGCTTATCAAAGCCACTaGCAAGCAGACTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: AGGQCHCCPDFFSFWKLKAYQSH*QADFRP
Trigger: GGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGC...CTTCAGCTTCCAGAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR GCA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTATAGCTTTTCCAATCTaGCTGTTCAATATGGGAACA +
Preference number: 4 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGIAFPI*LFNMGT
Trigger: TGTTCCCATATTGAACAGGCAGATTGGAAAAGCTAT...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGCGAAGCAGAGAACATaGAGGTGGAACTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHAKQRT*RWNCQL
Trigger: CAGCTGGCAGTTCCACCTGCATGTTCTCTGCTTCGC...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCAGCAGCTTTCCGCCTaGTTGAAAAAGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSAQQLSA*LKKEAG
Trigger: GCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTGCTG...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCTTCCCGTGTCATCACTaGTCACATGTGACTGTCGAA +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLFPCHH*SHVTVE
Trigger: TTCGACAGTCACATGTGACCAGTGATGACACGGGAA...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTTTCCCGTGTCATCACTaGTCACATGTGACTGTCGAA +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPFPCHH*SHVTVE
Trigger: TTCGACAGTCACATGTGACCAGTGATGACACGGGAA...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTACTGCTTCCCAGAAATTaGAGGCTTCTCTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLLLPRN*RLLFER
Trigger: TCTCTCAAAGAGAAGCCTCCAATTTCTGGGAAGCAG...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCCTGCTTCCCAGAAATTaGAGGCTTCTCTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVALLPRN*RLLFER
Trigger: TCTCTCAAAGAGAAGCCTCCAATTTCTGGGAAGCAG...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCAAGACATCGATCTTCTTaGTTGCTGTTGTACCTACAT +
Preference number: 4 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAARHRSS*LLLYLH
Trigger: ATGTAGGTACAACAGCAACCAAGAAGATCGATGTCT...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAAGCCAAACTTATGAATaGGCTCATTGGAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLSQTYE*AHWNPA
Trigger: CGCTGGATTCCAATGAGCCCATTCATAAGTTTGGCT...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCACAAAGAGTGACTCTTTaGATGTCAGACCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: SVKHRSPALAGDSKDITAQRVTL*MSDQEM
Trigger: CATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTG...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCGCATATCCTGTACTGTaGCTATGTCAATTTGCGAAT +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLAYPVL*LCQFAN
Trigger: ATTCGCAAATTGACATAGCCACAGTACAGGATATGC...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCGCATATCCTGTACTGTaGCTATGTCAATTTGCGAAT +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGAYPVL*LCQFAN
Trigger: ATTCGCAAATTGACATAGCCACAGTACAGGATATGC...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CCA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACGTGAATCGCAGTCTGTaGATCATGCTGACTTTGAAT +
Preference number: 4 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDVNRSL*IMLTLN
Trigger: ATTCAAAGTCAGCATGATCCACAGACTGCGATTCAC...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTTCTGAGGTCAGAAGCTaGGGTGTGCTGAAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGSEVRS*GVLKGK
Trigger: TTTCCCCTTCAGCACACCCCAGCTTCTGACCTCAGA...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCATGTCCACGCAGCTCCTaGGCTCTGAGGTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPCPRSS*ALRSEA
Trigger: AGCTTCTGACCTCAGAGCCCAGGAGCTGCGTGGACA...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGAAAGGACGCTCCTGTTaGCTGAACAAAGATCAGAAT +
Preference number: 4 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVKGRSC*LNKDQN
Trigger: ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTT...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGTCTAGGTCAACATCATaGTCAATGAGAACCATCTCA +
Preference number: 4 (lower is better)
Translates to: TSGHRVDSRALGPGRQALSRSTS*SMRTIS
Trigger: TGAGATGGTTCTCATTGATCATGATGTTGACCTAGA...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCGCTTCCCTGAATTTCTaGCCCACTGTCTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVASLNF*PTVSRH
Trigger: ATGCCTGGAGACAGTGGGTCAGAAATTCAGGGAAGC...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCATATACTGCCAGCAGATaGGCCCGATCAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPYTASR*ARSGPA
Trigger: TGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATA...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCTGAAGCCAAACTTATaGATGGGCTCATTGGAATCC +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPLKPNL*MGSLES
Trigger: GGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAG...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTATATTCGAACAAAGAGTaGCTCTTTGGATGTCAGACC +
Preference number: 4 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLYSNKE*LFGCQT
Trigger: GGTCTGACATCCAAAGAGTCACTCTTTGTTCGAATA...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTGCGGTACTGAGGGCCTaGAACTTTCTGGGATCCTTT +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSAAVLRA*NFLGSF
Trigger: AAAGGATCCCAGAAAGTTTCAGGCCCTCAGTACCGC...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCATTCTCCAGGCGGTACTaGGGGCCTGAAACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPFSRRY*GPETFW
Trigger: CCAGAAAGTTTCAGGCCCTCAGTACCGCCTGGAGAA...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCACCTCTCCCTGAAACGTaGGAAACAGCAGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPPLPET*ETAAFR
Trigger: GCGGAAAGCTGCTGTTTCTCACGTTTCAGGGAGAGG...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGAAGAATTCATCAGCATaGCCCCTTGTGCAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVKNSSA*PLVQRN
Trigger: ATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTT...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGAAGAATTCATCAGCATaGCCCCTTGTGCAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWKNSSA*PLVQRN
Trigger: ATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTT...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCAACTCCTGGGCTGATTaGTTAGAATTTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLNSWAD*LEFLSF
Trigger: GAAAGAAAGAAATTCTAAGCAATCAGCCCAGGAGTT...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
CDS-3UTR GCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCAACTCCTGGGCTGATTaGTTAGAATTTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGNSWAD*LEFLSF
Trigger: GAAAGAAAGAAATTCTAAGCAATCAGCCCAGGAGTT...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
CDS-3UTR GCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCAACAGATAATATCGACTaGTTCCCAGAAATTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SVKHRSPALAGDSKDITATDNID*FPEIGG
Trigger: GCCTCCAATTTCTGGGAAGCAGTCGATATTATCTGT...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTACCTACATGACCCTTaGCATCAAATTTGGAATACT +
Preference number: 4 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLYLHDP*HQIWNT
Trigger: AGTATTCCAAATTTGATGGCAAGGGTCATGTAGGTA...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCATCGATCTTCTTGGTTaGTGTTGTACCTACATGACC +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAIDLLG*CCTYMT
Trigger: GGTCATGTAGGTACAACAGCAACCAAGAAGATCGAT...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATCCTTCGCTTGTATACTaGCAGCAGATGAGCCCGATC +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHPSLVY*QQMSPI
Trigger: GATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGG...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCGTGGCTATGTCAATTTaGGAATCCTCCTCAAAAACC +
Preference number: 4 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAVAMSI*ESSSKT
Trigger: GGTTTTTGAGGAGGATTCGCAAATTGACATAGCCAC...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR GCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTACGTGAGTTTAAATATTaGGTGACTGGGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLREFKY*VTGAFL
Trigger: GAGAAAAGCCCCAGTCACGCAATATTTAAACTCACG...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCAGCTTATCAAAGCCACTaGCAAGCAGACTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPAYQSH*QADFRP
Trigger: GGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGC...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR GCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTGCTTATCAAAGCCACTaGCAAGCAGACTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSAAYQSH*QADFRP
Trigger: GGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGC...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR GCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTACCCTCGAAGCAAATaGACTCATTTAAACAAATGG +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGYPRSK*THLNKW
Trigger: CCATTTGTTTAAATGAGTGCATTTGCTTCGAGGGTA...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCACAGCAGCTTTCCGCCTaGTTGAAAAAGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPQQLSA*LKKEAG
Trigger: GCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTGCTG...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCCACTCAGCTTTAAGATaGTGTTTTAGACACATCTCT +
Preference number: 4 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGHSALR*CFRHIS
Trigger: AGAGATGTGTCTAAAACAGCATCTTAAAGCTGAGTG...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TTGAGCAAAGTAGTCAGCCCGGGCAGTGCTAGCTCGCGATTCCAGGATGTAGTTCAGACAGCCCCCTCTTaGTCTCTGCAAGGAGTGATG +
Preference number: 4 (lower is better)
Translates to: LSKVVSPGSASSRFQDVVQTAPS*SLQGVM
Trigger: CATCACTCCTTGCAGAGAGCAAGAGGGGGCTGTCTG...AACTACATCCTGGAATCGCGAGCTAGCACTGCCCGGGCTGACTACTTTGCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR CCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGAGACATCGATCTTCTTaGTTGCTGTTGTACCTACAT +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGRHRSS*LLLYLH
Trigger: ATGTAGGTACAACAGCAACCAAGAAGATCGATGTCT...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCCCTGCACCCTGGCGCTaGCCATTGTCACCACGGTCA +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPPAPWR*PLSPRS
Trigger: TGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAGG...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGGCATATCCTGTACTGTaGCTATGTCAATTTGCGAAT +
Preference number: 4 (lower is better)
Translates to: TSGHRVDSRALGPGRQALAYPVL*LCQFAN
Trigger: ATTCGCAAATTGACATAGCCACAGTACAGGATATGC...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACGCATATCCTGTACTGTaGCTATGTCAATTTGCGAAT +
Preference number: 4 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDAYPVL*LCQFAN
Trigger: ATTCGCAAATTGACATAGCCACAGTACAGGATATGC...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CCA 90 bp GGGAACAGAGGGCAGAGAACGTTCTGTGGAGCACTTGTGTTTGGACTTGAACAACAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GNRGQRTFCGALVFGLEQQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...TTGTTCAAGTCCAAACACAAGTGCTCCACAGAACGTTCTCTGCCCTCTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR CCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTACCGGTCCCCGGCCCTaGCTGGGGACAGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPTGPRP*LGTVRT
Trigger: TGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGT...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAAAAGGACGCTCCTGTTaGCTGAACAAAGATCAGAAT +
Preference number: 4 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLKGRSC*LNKDQN
Trigger: ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTT...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCAAAAGGACGCTCCTGTTaGCTGAACAAAGATCAGAAT +
Preference number: 4 (lower is better)
Translates to: SVKHRSPALAGDSKDITAKGRSC*LNKDQN
Trigger: ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTT...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCACAACATCATGATCAATaGGAACCATCTCACACATTC +
Preference number: 4 (lower is better)
Translates to: SVKHRSPALAGDSKDITAQHHDQ*EPSHTF
Trigger: GAATGTGTGAGATGGTTCTCATTGATCATGATGTTG...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCAGTCGTTCTAATCTTTaGGCTGTGTTTGAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPSRSNL*AVFERL
Trigger: AAGACGCTCAAACACAGCTCAAAGATTAGAACGACT...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCTGTCAGACCAGGAGATaGGTACTTTTCAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVCQTRR*VLFNQG
Trigger: GCCCTGGTTGAAAAGTACTCATCTCCTGGTCTGACA...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAAGTTTAAATATTGCGTaGCTGGGGCTTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLSLNIA*LGLFSS
Trigger: TGAAGAGAAAAGCCCCAGTCACGCAATATTTAAACT...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATCTCCTTCTGGAAGCTaGAGCTCGTACGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPSPSGS*SSYVCS
Trigger: TGAACAGACGTACGAGCTTCAGCTTCCAGAAGGAGA...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR TCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTAATGCAGGTCCTCAGTaGAACACCGGTCCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPNAGPQ*NTGPRP
Trigger: GGGCCGGGGACCGGTGTTTCACTGAGGACCTGCATT...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGAACTCCTGGGCTGATTaGTTAGAATTTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWNSWAD*LEFLSF
Trigger: GAAAGAAAGAAATTCTAAGCAATCAGCCCAGGAGTT...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
CDS-3UTR GCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTAGCCCGATCAGGTCCTaGACCCTGGCGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPSPIRS*TLALAI
Trigger: AATGGCCAGCGCCAGGGTGCAGGACCTGATCGGGCT...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCACCTTCGCTTGTATACTaGCAGCAGATGAGCCCGATC +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPPSLVY*QQMSPI
Trigger: GATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGG...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR GCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCGTGGCTATGTCAATTTaGGAATCCTCCTCAAAAACC +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPVAMSI*ESSSKT
Trigger: GGTTTTTGAGGAGGATTCGCAAATTGACATAGCCAC...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000497932.5
CDS-3UTR GCA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCGTGGCTATGTCAATTTaGGAATCCTCCTCAAAAACC +
Preference number: 4 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLVAMSI*ESSSKT
Trigger: GGTTTTTGAGGAGGATTCGCAAATTGACATAGCCAC...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000497932.5
CDS-3UTR GCA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCATTGAGATGGGTTTCTaGTTAATCCAAAACTTAGTG +
Preference number: 4 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTIEMGF*LIQNLV
Trigger: CACTAAGTTTTGGATTAAGCAGAAACCCATCTCAAT...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGATAGCTTTTCCAATCTaGCTGTTCAATATGGGAACA +
Preference number: 4 (lower is better)
Translates to: CQADFRPMAMSPALPPRGIAFPI*LFNMGT
Trigger: TGTTCCCATATTGAACAGGCAGATTGGAAAAGCTAT...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATAGCTTTTCCAATCTaGCTGTTCAATATGGGAACA +
Preference number: 4 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDIAFPI*LFNMGT
Trigger: TGTTCCCATATTGAACAGGCAGATTGGAAAAGCTAT...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGTACCCTCGAAGCAAATaGACTCATTTAAACAAATGG +
Preference number: 4 (lower is better)
Translates to: TSGHRVDSRALGPGRQALYPRSK*THLNKW
Trigger: CCATTTGTTTAAATGAGTGCATTTGCTTCGAGGGTA...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTGAACAAAGATCAGAATGCTGGGAGTGCAGCGTaGCTGAGGACCAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: GMEDIRKGRSCWLNKDQNAGSAA*LRTSHR
Trigger: GCGGTGGCTGGTCCTCAGGCACGCTGCACTCCCAGC...ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCTTCCCGTGTCATCACTaGTCACATGTGACTGTCGAA +
Preference number: 4 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSFPCHH*SHVTVE
Trigger: TTCGACAGTCACATGTGACCAGTGATGACACGGGAA...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CCA 90 bp CCCTGGCAGGCAGGCTCTGAGCTACGGAACAGATTGAGGCTGGAGGCCAGTGTCAGACATCGATCTTCTTaGTTGCTGTTGTACCTACAT +
Preference number: 4 (lower is better)
Translates to: PWQAGSELRNRLRLEASVRHRSS*LLLYLH
Trigger: ATGTAGGTACAACAGCAACCAAGAAGATCGATGTCT...GACACTGGCCTCCAGCCTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR CCA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCAGGCAGCAGTCTGTCCTaGCTCGAGTGCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPGSSLS*LECRGR
Trigger: CCTCCCTCTGCACTCGAGCCAGGACAGACTGCTGCC...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTCCTGCACCCTGGCGCTaGCCATTGTCACCACGGTCA +
Preference number: 4 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPPAPWR*PLSPRS
Trigger: TGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAGG...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAACCTGCACCCTGGCGCTaGCCATTGTCACCACGGTCA +
Preference number: 4 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQPAPWR*PLSPRS
Trigger: TGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAGG...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CCA 90 bp GAGGCTGGAGGCCAGTGTCACTGCTGCCCGGATTTCTTCTCCTTCTGGAAGCTGAGCCAAACTTATGAATaGGCTCATTGGAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: EAGGQCHCCPDFFSFWKLSQTYE*AHWNPA
Trigger: CGCTGGATTCCAATGAGCCCATTCATAAGTTTGGCT...CAGCTTCCAGAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCCAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR CCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCGTGAATCGCAGTCTGTaGATCATGCTGACTTTGAAT +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPVNRSL*IMLTLN
Trigger: ATTCAAAGTCAGCATGATCCACAGACTGCGATTCAC...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR CCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTTTGCAAGGAAATGTGTaGGCACGGCTCTGTACATCC +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSALQGNV*ARLCTS
Trigger: GGATGTACAGAGCCGTGCCCACACATTTCCTTGCAA...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCCGGAAAGACCATGTCTaGCTGGGAGTGCAGCGTGCC +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPRKDHV*LGVQRA
Trigger: GGCACGCTGCACTCCCAGCCAGACATGGTCTTTCCG...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATCAGAGAACATGCAGGTaGAACTGCCAGCTGAAACCT +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHQRTCR*NCQLKP
Trigger: AGGTTTCAGCTGGCAGTTCCACCTGCATGTTCTCTG...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
3UTR CAA 72 bp TCCCTGAAACGTGAGAAACAGCAGCTTTCCGCCTGCTaGAAAAAGGAGGCAGGCGCTGTAAGGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLKREKQQLSAC*KKEAGAVRRRG
Trigger: TCCTCTTCTCCTTACAGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTGCTGTTTCTCACGTTTCAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGACCCGGGACACGTTCCTaGGGGGAGGGCCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGPGTRS*GEGPAP
Trigger: GGGAGCCGGGCCCTCCCCTCAGGAACGTGTCCCGGG...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTGTGACTGTCGAATATaGGCTAGAATGATAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPCDCRI*ARMIVG
Trigger: TCCAACTATCATTCTAGCTCATATTCGACAGTCACA...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATACTGTCTCCAGGCATTaGAGGAGGATGAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHTVSRH*RRMNLL
Trigger: GAGAAGATTCATCCTCCTTCAATGCCTGGAGACAGT...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCACCAGGGCCAAAGTACTaGAGCCAAACTTATGAATGG +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPPGPKY*SQTYEW
Trigger: CCATTCATAAGTTTGGCTTCAGTACTTTGGCCCTGG...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATCCAGGGCCAAAGTACTaGAGCCAAACTTATGAATGG +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHPGPKY*SQTYEW
Trigger: CCATTCATAAGTTTGGCTTCAGTACTTTGGCCCTGG...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTTTAGTGCTGGCTTTCTaGTTCGTAACAGGGTCTATC +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGLVLAF*FVTGSI
Trigger: GATAGACCCTGTTACGAATCAGAAAGCCAGCACTAA...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCATCTCCTTCTGGAAGCTaGAGCTCGTACGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPSPSGS*SSYVCS
Trigger: TGAACAGACGTACGAGCTTCAGCTTCCAGAAGGAGA...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR GCA 90 bp ACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACAGCCCGATCAGGTCCTaGACCCTGGCGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: TEFPVMAKVSDIQSSTQNSPIRS*TLALAI
Trigger: AATGGCCAGCGCCAGGGTGCAGGACCTGATCGGGCT...GTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR GCA 90 bp GAGGCTGGAGGCCAGTGTCACTGCTGCCCGGATTTCTTCTCCTTCTGGAAGCTGGTGGCTATGTCAATTTaGGAATCCTCCTCAAAAACC +
Preference number: 4 (lower is better)
Translates to: EAGGQCHCCPDFFSFWKLVAMSI*ESSSKT
Trigger: GGTTTTTGAGGAGGATTCGCAAATTGACATAGCCAC...CAGCTTCCAGAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCCAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR GCA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATTGAGATGGGTTTCTaGTTAATCCAAAACTTAGTG +
Preference number: 4 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDIEMGF*LIQNLV
Trigger: CACTAAGTTTTGGATTAAGCAGAAACCCATCTCAAT...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTACACTCAGCTTTAAGATaGTGTTTTAGACACATCTCT +
Preference number: 4 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLHSALR*CFRHIS
Trigger: AGAGATGTGTCTAAAACAGCATCTTAAAGCTGAGTG...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTGGCAGCAGTCTGTCCTaGCTCGAGTGCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSGSSLS*LECRGR
Trigger: CCTCCCTCTGCACTCGAGCCAGGACAGACTGCTGCC...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTAGCCAAACTTATGAATaGGCTCATTGGAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGSQTYE*AHWNPA
Trigger: CGCTGGATTCCAATGAGCCCATTCATAAGTTTGGCT...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCAAAGAGTGACTCTTTaGATGTCAGACCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSQRVTL*MSDQEM
Trigger: CATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTG...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCGCATATCCTGTACTGTaGCTATGTCAATTTGCGAAT +
Preference number: 4 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPAYPVL*LCQFAN
Trigger: ATTCGCAAATTGACATAGCCACAGTACAGGATATGC...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCAGTGACTTTAACTCCTaGGCTGAAGCTGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVSDFNS*AEAAST
Trigger: TGTGGAAGCAGCTTCAGCCCAGGAGTTAAAGTCACT...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394063.5
CDS-3UTR TCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCACGAGCTCACCTACCTaGAGCTGCTTCCACACTACG +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPTSSPT*SCFHTT
Trigger: CGTAGTGTGGAAGCAGCTTCAGGTAGGTGAGCTCGT...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373511.6
CDS-3UTR TCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATCATGCTGACTTTGAATaGCTTGTAATGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHHADFE*LVMVAA
Trigger: AGCAGCCACCATTACAAGTCATTCAAAGTCAGCATG...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR TCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTTTAGTGCTGGCTTTCTaGTTCGTAACAGGGTCTATC +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSALVLAF*FVTGSI
Trigger: GATAGACCCTGTTACGAATCAGAAAGCCAGCACTAA...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR TCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATTTAGTGCTGGCTTTCTaGTTCGTAACAGGGTCTATC +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHLVLAF*FVTGSI
Trigger: GATAGACCCTGTTACGAATCAGAAAGCCAGCACTAA...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCACAGGTCGGAATCGATTaGGATGGGTTTCTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPQVGID*DGFLLN
Trigger: ATTAAGCAGAAACCCATCTCAATCGATTCCGACCTG...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGCTCACCCCTCTCCCTaGAACGTGAGAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPAHPSP*NVRNSS
Trigger: GCTGCTGTTTCTCACGTTTCAGGGAGAGGGGTGAGC...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCACAGATAATATCGACTaGTTCCCAGAAATTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSTDNID*FPEIGG
Trigger: GCCTCCAATTTCTGGGAAGCAGTCGATATTATCTGT...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTATCGATCTTCTTGGTTaGTGTTGTACCTACATGACC +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGIDLLG*CCTYMT
Trigger: GGTCATGTAGGTACAACAGCAACCAAGAAGATCGAT...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTCGTGAGTTTAAATATTaGGTGACTGGGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGREFKY*VTGAFL
Trigger: GAGAAAAGCCCCAGTCACGCAATATTTAAACTCACG...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGCAGTGCTAGCTCGCGATTCCAGGATGTAGTTAACCTTGAGCACAATTTCATTGGAGGCCAGTGTCACTaGTGCCCGGATTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GSASSRFQDVVNLEHNFIGGQCH*CPDFFS
Trigger: GGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCC...AATGAAATTGTGCTCAAGGTTAACTACATCCTGGAATCGCGAGCTAGCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR GCA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTTACCCTCGAAGCAAATaGACTCATTTAAACAAATGG +
Preference number: 4 (lower is better)
Translates to: QSHCQADFRPMAMSPALPYPRSK*THLNKW
Trigger: CCATTTGTTTAAATGAGTGCATTTGCTTCGAGGGTA...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCGCGAAGCAGAGAACATaGAGGTGGAACTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPAKQRT*RWNCQL
Trigger: CAGCTGGCAGTTCCACCTGCATGTTCTCTGCTTCGC...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTGAGGCTGTCGAGGACTaGAGAGGCATCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSEAVED*RGIWCG
Trigger: GCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTC...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTGTGAATCGCAGTCTGTaGATCATGCTGACTTTGAAT +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGVNRSL*IMLTLN
Trigger: ATTCAAAGTCAGCATGATCCACAGACTGCGATTCAC...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CCA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCGTGAATCGCAGTCTGTaGATCATGCTGACTTTGAAT +
Preference number: 4 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSVNRSL*IMLTLN
Trigger: ATTCAAAGTCAGCATGATCCACAGACTGCGATTCAC...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCGATTTCTTCTCCTTCTaGAAGCTGAAGCTCGTACGT +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVDFFSF*KLKLVR
Trigger: ACGTACGAGCTTCAGCTTCCAGAAGGAGAAGAAATC...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTCAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTTGTCCACGCAGCTCCTaGGCTCTGAGGTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPCPRSS*ALRSEA
Trigger: AGCTTCTGACCTCAGAGCCCAGGAGCTGCGTGGACA...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTCAGAGGCATCTGGTGTaGCCAGAGGCGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSQRHLV*PEAWCQ
Trigger: CTGACACCACGCCTCTGGCCACACCAGATGCCTCTG...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAACGAGCTCACCTACCTaGAGCTGCTTCCACACTACG +
Preference number: 4 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQTSSPT*SCFHTT
Trigger: CGTAGTGTGGAAGCAGCTTCAGGTAGGTGAGCTCGT...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTCAACATCATGATCAATaGGAACCATCTCACACATTC +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGQHHDQ*EPSHTF
Trigger: GAATGTGTGAGATGGTTCTCATTGATCATGATGTTG...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATTATTCGAACAAAGAGTaGCTCTTTGGATGTCAGACC +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHYSNKE*LFGCQT
Trigger: GGTCTGACATCCAAAGAGTCACTCTTTGTTCGAATA...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTGAACAAAGATCAGAATAACCCCGTCTGCCCTTaGACTGTTCTCGCGGACCAG +
Preference number: 4 (lower is better)
Translates to: GMEDIRKGRSCWLNKDQNNPVCP*TVLADQ
Trigger: CTGGTCCGCGAGAACAGTTCAAGGGCAGACGGGGTT...ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR TCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTCTGGCAGGCAGGCTCTaGGCTACGGAACAGATTGAG +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSLAGRL*ATEQIE
Trigger: CTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAG...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTCCTCTCCCTGAAACGTaGGAAACAGCAGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPPLPET*ETAAFR
Trigger: GCGGAAAGCTGCTGTTTCTCACGTTTCAGGGAGAGG...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTACTTGTGTTTGGACTTaGACAATGACACAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSATCVWT*TMTQLQ
Trigger: TTGCAGCTGTGTCATTGTTCAAGTCCAAACACAAGT...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR GCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCAATCGATCTTCTTGGTTaGTGTTGTACCTACATGACC +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPIDLLG*CCTYMT
Trigger: GGTCATGTAGGTACAACAGCAACCAAGAAGATCGAT...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp AAATGCCAAAACTGGTTGATGGGGATCCAGGGTGCTAAATCACACTGCAGAGGACCTTCGCTTGTATACTaGCAGCAGATGAGCCCGATC +
Preference number: 4 (lower is better)
Translates to: KCQNWLMGIQGAKSHCRGPSLVY*QQMSPI
Trigger: GATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGG...TCCTCTGCAGTGTGATTTAGCACCCTGGATCCCCATCAACCAGTTTTGGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR GCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGGCCAGTGTCACTGCTaGCCGGATTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPGQCHC*PDFFSF
Trigger: GAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCC...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTGGAGGCCAGTGTCACTaGTGCCCGGATTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSGGQCH*CPDFFS
Trigger: GGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCC...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAATGTCACCACGGTCATTaGCAGCAGTCTGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQCHHGH*QQSVLA
Trigger: AGCCAGGACAGACTGCTGCCAATGACCGTGGTGACA...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGTGAATCGCAGTCTGTaGATCATGCTGACTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHVNRSL*IMLTLN
Trigger: ATTCAAAGTCAGCATGATCCACAGACTGCGATTCAC...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGATTTCTTCTCCTTCTaGAAGCTGAAGCTCGTACGT +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPDFFSF*KLKLVR
Trigger: ACGTACGAGCTTCAGCTTCCAGAAGGAGAAGAAATC...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR CCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTAAGACCATGTCTGGCTaGGAGTGCAGCGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSKTMSG*ECSVPE
Trigger: CTCAGGCACGCTGCACTCCCAGCCAGACATGGTCTT...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTAAAGGACGCTCCTGTTaGCTGAACAAAGATCAGAAT +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSAKGRSC*LNKDQN
Trigger: ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTT...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCAGAACCTGAAACTTTCTaGGATCCTTTTCTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPEPETF*DPFLRF
Trigger: GAAGCGAAGAAAAGGATCCCAGAAAGTTTCAGGTTC...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350766.7
CDS-3UTR CCA 90 bp GAGGGCAGAGAACGTTCTGTGGAGCACTTGTGTTTGGACTTGAACAATGACACATGCAAAGTTAATCACTaGGCCGAGGCACGGTGGACA +
Preference number: 4 (lower is better)
Translates to: EGRERSVEHLCLDLNNDTCKVNH*AEARWT
Trigger: TGTCCACCGTGCCTCGGCCCAGTGATTAACTTTGCA...TGTGTCATTGTTCAAGTCCAAACACAAGTGCTCCACAGAACGTTCTCTGCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
3UTR CAA 72 bp AGGGGAACAGAGGGCAGAGAACGTTCTGTGGAGCACTaGTGTTTGGACTTGAACAATGACACAGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RGTEGRERSVEH*CLDLNNDTAAK
Trigger: CTTTGCAGCTGTGTCATTGTTCAAGTCCAAACACAAGTGCTCCACAGAACGTTCTCTGCCCTCTGTTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR TCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTTGTGACTGTCGAATATaGGCTAGAATGATAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSACDCRI*ARMIVG
Trigger: TCCAACTATCATTCTAGCTCATATTCGACAGTCACA...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATTCTTTGAGCTGTGTTTaGGCGTCTTCTAATACCAAA +
Preference number: 4 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHSLSCV*ASSNTK
Trigger: TTTGGTATTAGAAGACGCTCAAACACAGCTCAAAGA...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAAGTCGTTCTAATCTTTaGGCTGTGTTTGAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPSRSNL*AVFERL
Trigger: AAGACGCTCAAACACAGCTCAAAGATTAGAACGACT...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp ACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACTATACTGCCAGCAGATaGGCCCGATCAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TEFPVMAKVSDIQSSTQNYTASR*ARSGPA
Trigger: TGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATA...GTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCTGTCAGACCAGGAGATaGGTACTTTTCAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPCQTRR*VLFNQG
Trigger: GCCCTGGTTGAAAAGTACTCATCTCCTGGTCTGACA...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TTGAGCAAAGTAGTCAGCCCGGGCAGTGCTAGCTCGCGATTCCAGGATGTAGTTTATTCGAACAAAGAGTaGCTCTTTGGATGTCAGACC +
Preference number: 4 (lower is better)
Translates to: LSKVVSPGSASSRFQDVVYSNKE*LFGCQT
Trigger: GGTCTGACATCCAAAGAGTCACTCTTTGTTCGAATA...AACTACATCCTGGAATCGCGAGCTAGCACTGCCCGGGCTGACTACTTTGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR TCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCATAAGGGAGAATCCATaGGCAGCATTTATTCGAACA +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVIRENP*AAFIRT
Trigger: TGTTCGAATAAATGCTGCTCATGGATTCTCCCTTAT...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTAGTTTAAATATTGCGTaGCTGGGGCTTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSASLNIA*LGLFSS
Trigger: TGAAGAGAAAAGCCCCAGTCACGCAATATTTAAACT...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCAAGTTTAAATATTGCGTaGCTGGGGCTTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SDPQASLIKATAKQTSVPSLNIA*LGLFSS
Trigger: TGAAGAGAAAAGCCCCAGTCACGCAATATTTAAACT...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp AAATGCCAAAACTGGTTGATGGGGATCCAGGGTGCTAAATCACACTGCAGAGGAAATGCCAAAACTGGTTaGTGGGGATCCAGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: KCQNWLMGIQGAKSHCRGNAKTG*WGSRVL
Trigger: TAGCACCCTGGATCCCCATCAACCAGTTTTGGCATT...TCCTCTGCAGTGTGATTTAGCACCCTGGATCCCCATCAACCAGTTTTGGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR GCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTAACTCCTGGGCTGATTaGTTAGAATTTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGNSWAD*LEFLSF
Trigger: GAAAGAAAGAAATTCTAAGCAATCAGCCCAGGAGTT...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
CDS-3UTR GCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTCCTTCGCTTGTATACTaGCAGCAGATGAGCCCGATC +
Preference number: 4 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPPSLVY*QQMSPI
Trigger: GATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGG...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCAGTGACTTTAACTCCTaGGCTGATTGCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSSDFNS*ADCLEF
Trigger: AAATTCTAAGCAATCAGCCCAGGAGTTAAAGTCACT...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
CDS-3UTR CCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTAGACATCGATCTTCTTaGTTGCTGTTGTACCTACAT +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSARHRSS*LLLYLH
Trigger: ATGTAGGTACAACAGCAACCAAGAAGATCGATGTCT...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTGGCATTGAAGGTGGCTaGGCGGCACGTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLGIEGG*AARGSS
Trigger: AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCC...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCCAGAGAACATGCAGGTaGAACTGCCAGCTGAAACCT +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPQRTCR*NCQLKP
Trigger: AGGTTTCAGCTGGCAGTTCCACCTGCATGTTCTCTG...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTACCGGTCCCCGGCCCTaGCTGGGGACAGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFTGPRP*LGTVRT
Trigger: TGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGT...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAAAAGGACGCTCCTGTTaGCTGAACAAAGATCAGAAT +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPKGRSC*LNKDQN
Trigger: ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTT...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACGCTTCCCTGAATTTCTaGCCCACTGTCTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: TEFPVMAKVSDIQSSTQNASLNF*PTVSRH
Trigger: ATGCCTGGAGACAGTGGGTCAGAAATTCAGGGAAGC...GTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCATGTCAGACCAGGAGATaGGTACTTTTCAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPCQTRR*VLFNQG
Trigger: GCCCTGGTTGAAAAGTACTCATCTCCTGGTCTGACA...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTGCGGTACTGAGGGCCTaGAACTTTCTGGGATCCTTT +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSAVLRA*NFLGSF
Trigger: AAAGGATCCCAGAAAGTTTCAGGCCCTCAGTACCGC...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTGCTGTACGTCGGTTGTaGATCGCAGTCTGTGGATCA +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSAVRRL*IAVCGS
Trigger: TGATCCACAGACTGCGATTCACAACCGACGTACAGC...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR TCA 90 bp GGGAACAGAGGGCAGAGAACGTTCTGTGGAGCACTTGTGTTTGGACTTGAACAATTAGTGCTGGCTTTCTaGTTCGTAACAGGGTCTATC +
Preference number: 4 (lower is better)
Translates to: GNRGQRTFCGALVFGLEQLVLAF*FVTGSI
Trigger: GATAGACCCTGTTACGAATCAGAAAGCCAGCACTAA...TTGTTCAAGTCCAAACACAAGTGCTCCACAGAACGTTCTCTGCCCTCTGTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR TCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTTCTCCTTCTGGAAGCTaGAGCTCGTACGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPSPSGS*SSYVCS
Trigger: TGAACAGACGTACGAGCTTCAGCTTCCAGAAGGAGA...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAAAGAATTCATCAGCATaGCCCCTTGTGCAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: IAYQSHCQADFRPMAMSPKNSSA*PLVQRN
Trigger: ATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTT...TGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCTACCTACATGACCCTTaGCATCAAATTTGGAATACT +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVYLHDP*HQIWNT
Trigger: AGTATTCCAAATTTGATGGCAAGGGTCATGTAGGTA...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTATTGAGATGGGTTTCTaGTTAATCCAAAACTTAGTG +
Preference number: 4 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGIEMGF*LIQNLV
Trigger: CACTAAGTTTTGGATTAAGCAGAAACCCATCTCAAT...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCACTCAGCTTTAAGATaGTGTTTTAGACACATCTCT +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVHSALR*CFRHIS
Trigger: AGAGATGTGTCTAAAACAGCATCTTAAAGCTGAGTG...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTCAGACTTCCGTCCCATaGCAATGTCCCCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLQTSVP*QCPQRS
Trigger: GGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTG...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp AAATGCCAAAACTGGTTGATGGGGATCCAGGGTGCTAAATCACACTGCAGAGGAGGCATTGAAGGAGGATaGATCTTCTCTAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: KCQNWLMGIQGAKSHCRGGIEGG*IFSRST
Trigger: TGTTGACCTAGAGAAGATTCATCCTCCTTCAATGCC...TCCTCTGCAGTGTGATTTAGCACCCTGGATCCCCATCAACCAGTTTTGGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAACTGTCTCCAGGCATTaGAGGAGGATGAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQTVSRH*RRMNLL
Trigger: GAGAAGATTCATCCTCCTTCAATGCCTGGAGACAGT...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAACCAGGGCCAAAGTACTaGAGCCAAACTTATGAATGG +
Preference number: 4 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQPGPKY*SQTYEW
Trigger: CCATTCATAAGTTTGGCTTCAGTACTTTGGCCCTGG...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCTTAGTGCTGGCTTTCTaGTTCGTAACAGGGTCTATC +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPLVLAF*FVTGSI
Trigger: GATAGACCCTGTTACGAATCAGAAAGCCAGCACTAA...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GAGGGCAGAGAACGTTCTGTGGAGCACTTGTGTTTGGACTTGAACAATGACACACAGGTCGGAATCGATTaGGATGGGTTTCTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: EGRERSVEHLCLDLNNDTQVGID*DGFLLN
Trigger: ATTAAGCAGAAACCCATCTCAATCGATTCCGACCTG...TGTGTCATTGTTCAAGTCCAAACACAAGTGCTCCACAGAACGTTCTCTGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR TCA 90 bp CTTGAGCACAATTTCATTGACGGTAGCAGCGTCCGATTCAAAGTAGAGGTGTTTTCTCCTTCTGGAAGCTaGAGCTCGTACGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LEHNFIDGSSVRFKVEVFSPSGS*SSYVCS
Trigger: TGAACAGACGTACGAGCTTCAGCTTCCAGAAGGAGA...AAACACCTCTACTTTGAATCGGACGCTGCTACCGTCAATGAAATTGTGCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR TCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTCTGGCAGGCAGGCTCTaGGCTACGGAACAGATTGAG +
Preference number: 4 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLLAGRL*ATEQIE
Trigger: CTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAG...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATACCGCAGGAGGGACACTaGAGAGGCTGTCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNIPQEGH*RGCRGL
Trigger: CAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGCGG...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp AAATGCCAAAACTGGTTGATGGGGATCCAGGGTGCTAAATCACACTGCAGAGGATCCTTAACACAGCCTTaGCAGCCAGTGAAATTAGTG +
Preference number: 4 (lower is better)
Translates to: KCQNWLMGIQGAKSHCRGSLTQP*QPVKLV
Trigger: CACTAATTTCACTGGCTGTCAAGGCTGTGTTAAGGA...TCCTCTGCAGTGTGATTTAGCACCCTGGATCCCCATCAACCAGTTTTGGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCAGATGGCAAAGGTTTCTaGCATCCAGTCCAGTACTCA +
Preference number: 4 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPDGKGF*HPVQYS
Trigger: TGAGTACTGGACTGGATGTCAGAAACCTTTGCCATC...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR GCA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCACCTGAGTCTCACCATTaGTTCCCTGAATTTCTGACC +
Preference number: 4 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPPESHH*FPEFLT
Trigger: GGTCAGAAATTCAGGGAAGCAATGGTGAGACTCAGG...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR GCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATAAGCCCGATCAGGTCCTaGACCCTGGCGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNISPIRS*TLALAI
Trigger: AATGGCCAGCGCCAGGGTGCAGGACCTGATCGGGCT...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCATTGAGATGGGTTTCTaGTTAATCCAAAACTTAGTG +
Preference number: 4 (lower is better)
Translates to: WSDPQASLIKATAKQTSVIEMGF*LIQNLV
Trigger: CACTAAGTTTTGGATTAAGCAGAAACCCATCTCAAT...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTATTGAGATGGGTTTCTaGTTAATCCAAAACTTAGTG +
Preference number: 4 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSAIEMGF*LIQNLV
Trigger: CACTAAGTTTTGGATTAAGCAGAAACCCATCTCAAT...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR GCA 90 bp GGAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTGAACAAAGATCAGAATGCTTATCAAAGCCACTaGCAAGCAGACTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GMEDIRKGRSCWLNKDQNAYQSH*QADFRP
Trigger: GGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGC...ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAATTCCCGTGTCATCACTaGTCACATGTGACTGTCGAA +
Preference number: 4 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQFPCHH*SHVTVE
Trigger: TTCGACAGTCACATGTGACCAGTGATGACACGGGAA...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CCA 90 bp AAATGCCAAAACTGGTTGATGGGGATCCAGGGTGCTAAATCACACTGCAGAGGAAGCCAAACTTATGAATaGGCTCATTGGAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: KCQNWLMGIQGAKSHCRGSQTYE*AHWNPA
Trigger: CGCTGGATTCCAATGAGCCCATTCATAAGTTTGGCT...TCCTCTGCAGTGTGATTTAGCACCCTGGATCCCCATCAACCAGTTTTGGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCGATTTCTTCTCCTTCTaGAAGCTGAAGCTCGTACGT +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPDFFSF*KLKLVR
Trigger: ACGTACGAGCTTCAGCTTCCAGAAGGAGAAGAAATC...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGAGGCTCCTCTAGGGGGTaGTCTGACCCCCAAGCATCG +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGGSSRG*SDPQAS
Trigger: CGATGCTTGGGGGTCAGACCACCCCCTAGAGGAGCC...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGAGGCATTGAAGGTGGCTaGGCGGCACGTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGGIEGG*AARGSS
Trigger: AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCC...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTGTGTGGCCAGAGGCGTaGTGTCAGGGGCATCTGATC +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFVWPEA*CQGHLI
Trigger: GATCAGATGCCCCTGACACCACGCCTCTGGCCACAC...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTGACTGCAGAGGCATCTaGTGTGGCCAGAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFDCRGI*CGQRRG
Trigger: ACCACGCCTCTGGCCACACCAGATGCCTCTGCAGTC...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AAATGCCAAAACTGGTTGATGGGGATCCAGGGTGCTAAATCACACTGCAGAGGAGCACCTGAAACTTTCTaGGATCCTTTTCTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: KCQNWLMGIQGAKSHCRGAPETF*DPFLRF
Trigger: GAAGCGAAGAAAAGGATCCCAGAAAGTTTCAGGTGC...TCCTCTGCAGTGTGATTTAGCACCCTGGATCCCCATCAACCAGTTTTGGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCACTGAAGCCAAACTTATaGATGGGCTCATTGGAATCC +
Preference number: 4 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPLKPNL*MGSLES
Trigger: GGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAG...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGAAACCCCGTCTGCCCTTaGACTGTTCTCGCGGACCAG +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGNPVCP*TVLADQ
Trigger: CTGGTCCGCGAGAACAGTTCAAGGGCAGACGGGGTT...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR TCA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTCAGGTCGGAATCGATTaGGATGGGTTTCTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPQVGID*DGFLLN
Trigger: ATTAAGCAGAAACCCATCTCAATCGATTCCGACCTG...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp AAATGCCAAAACTGGTTGATGGGGATCCAGGGTGCTAAATCACACTGCAGAGGATTAGTCACAAGCACCTaGAACTTTCTGGGATCCTTT +
Preference number: 4 (lower is better)
Translates to: KCQNWLMGIQGAKSHCRGLVTST*NFLGSF
Trigger: AAAGGATCCCAGAAAGTTTCAGGTGCTTGTGACTAA...TCCTCTGCAGTGTGATTTAGCACCCTGGATCCCCATCAACCAGTTTTGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR GCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCACAGATAATATCGACTaGTTCCCAGAAATTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPTDNID*FPEIGG
Trigger: GCCTCCAATTTCTGGGAAGCAGTCGATATTATCTGT...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp AAATGCCAAAACTGGTTGATGGGGATCCAGGGTGCTAAATCACACTGCAGAGGAATCGATCTTCTTGGTTaGTGTTGTACCTACATGACC +
Preference number: 4 (lower is better)
Translates to: KCQNWLMGIQGAKSHCRGIDLLG*CCTYMT
Trigger: GGTCATGTAGGTACAACAGCAACCAAGAAGATCGAT...TCCTCTGCAGTGTGATTTAGCACCCTGGATCCCCATCAACCAGTTTTGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR GCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTCAGGCAGAACTCCCATaGGCTCTGGCTCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLQAELP*ALALQS
Trigger: ACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTG...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp TTGAGCAAAGTAGTCAGCCCGGGCAGTGCTAGCTCGCGATTCCAGGATGTAGTTATTGAGATGGGTTTCTaGTTAATCCAAAACTTAGTG +
Preference number: 4 (lower is better)
Translates to: LSKVVSPGSASSRFQDVVIEMGF*LIQNLV
Trigger: CACTAAGTTTTGGATTAAGCAGAAACCCATCTCAAT...AACTACATCCTGGAATCGCGAGCTAGCACTGCCCGGGCTGACTACTTTGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR GCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCCGTGAGTTTAAATATTaGGTGACTGGGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPREFKY*VTGAFL
Trigger: GAGAAAAGCCCCAGTCACGCAATATTTAAACTCACG...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATAGAGGCTGTCGAGGACTaGAGAGGCATCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNIEAVED*RGIWCG
Trigger: GCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTC...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAACTGCTTCCCAGAAATTaGAGGCTTCTCTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQLLPRN*RLLFER
Trigger: TCTCTCAAAGAGAAGCCTCCAATTTCTGGGAAGCAG...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTGGGCCTGAAACTTTCTaGGATCCTTTTCTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSGPETF*DPFLRF
Trigger: GAAGCGAAGAAAAGGATCCCAGAAAGTTTCAGGCCC...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTAACTCCCATGCGCTCTaGCTCTCCAAAGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLNSHAL*LSKVLS
Trigger: GGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTT...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATACGGAAAGACCATGTCTaGCTGGGAGTGCAGCGTGCC +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNIRKDHV*LGVQRA
Trigger: GGCACGCTGCACTCCCAGCCAGACATGGTCTTTCCG...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATAGTGTGGCCAGAGGCGTaGTGTCAGGGGCATCTGATC +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNIVWPEA*CQGHLI
Trigger: GATCAGATGCCCCTGACACCACGCCTCTGGCCACAC...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGACAGAGGCATCTGGTGTaGCCAGAGGCGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGQRHLV*PEAWCQ
Trigger: CTGACACCACGCCTCTGGCCACACCAGATGCCTCTG...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGAGACTGCAGAGGCATCTaGTGTGGCCAGAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGDCRGI*CGQRRG
Trigger: ACCACGCCTCTGGCCACACCAGATGCCTCTGCAGTC...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCCAACATCATGATCAATaGGAACCATCTCACACATTC +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPQHHDQ*EPSHTF
Trigger: GAATGTGTGAGATGGTTCTCATTGATCATGATGTTG...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCAAGTCGTTCTAATCTTTaGGCTGTGTTTGAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPSRSNL*AVFERL
Trigger: AAGACGCTCAAACACAGCTCAAAGATTAGAACGACT...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GGAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTGAACAAAGATCAGAATCCAGGGCCAAAGTACTaGAGCCAAACTTATGAATGG +
Preference number: 4 (lower is better)
Translates to: GMEDIRKGRSCWLNKDQNPGPKY*SQTYEW
Trigger: CCATTCATAAGTTTGGCTTCAGTACTTTGGCCCTGG...ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCATATTCGAACAAAGAGTaGCTCTTTGGATGTCAGACC +
Preference number: 4 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPYSNKE*LFGCQT
Trigger: GGTCTGACATCCAAAGAGTCACTCTTTGTTCGAATA...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCATAAGGGAGAATCCATaGGCAGCATTTATTCGAACA +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPIRENP*AAFIRT
Trigger: TGTTCGAATAAATGCTGCTCATGGATTCTCCCTTAT...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTCCTCTCCCTGAAACGTaGGAAACAGCAGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFPLPET*ETAAFR
Trigger: GCGGAAAGCTGCTGTTTCTCACGTTTCAGGGAGAGG...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTGACGCTCCTGTTGGCTaGACAAAGATCAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSDAPVG*TKIRMK
Trigger: TTTCATTCTGATCTTTGTTCAGCCAACAGGAGCGTC...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCAACAGATAATATCGACTaGTTCCCAGAAATTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPTDNID*FPEIGG
Trigger: GCCTCCAATTTCTGGGAAGCAGTCGATATTATCTGT...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR GCA 90 bp GGCAGTGCTAGCTCGCGATTCCAGGATGTAGTTAACCTTGAGCACAATTTCATTATCGATCTTCTTGGTTaGTGTTGTACCTACATGACC +
Preference number: 4 (lower is better)
Translates to: GSASSRFQDVVNLEHNFIIDLLG*CCTYMT
Trigger: GGTCATGTAGGTACAACAGCAACCAAGAAGATCGAT...AATGAAATTGTGCTCAAGGTTAACTACATCCTGGAATCGCGAGCTAGCACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR GCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTCCTTCGCTTGTATACTaGCAGCAGATGAGCCCGATC +
Preference number: 4 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLPSLVY*QQMSPI
Trigger: GATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGG...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTTCTGGCTCTCCAAAGTaGTGTCCAGGTCAACGGCGA +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFSGSPK*CPGQRR
Trigger: TCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGA...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTGGCCAGTGTCACTGCTaGCCGGATTTCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFGQCHC*PDFFSF
Trigger: GAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCC...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTGCGAAGCAGAGAACATaGAGGTGGAACTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFAKQRT*RWNCQL
Trigger: CAGCTGGCAGTTCCACCTGCATGTTCTCTGCTTCGC...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCAAAGAGTGACTCTTTaGATGTCAGACCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: TEFPVMAKVSDIQSSTQNQRVTL*MSDQEM
Trigger: CATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTG...GTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CCA 90 bp GGAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTGAACAAAGATCAGAATGGGCCTGAAACTTTCTaGGATCCTTTTCTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: GMEDIRKGRSCWLNKDQNGPETF*DPFLRF
Trigger: GAAGCGAAGAAAAGGATCCCAGAAAGTTTCAGGCCC...ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGAGGTCAACGGCGACATTaGGCTCGCTCTGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGGQRRH*ARSASP
Trigger: TGGAGAAGCAGAGCGAGCCCAATGTCGCCGTTGACC...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAACTCCCATGCGCTCTaGCTCTCCAAAGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFNSHAL*LSKVLS
Trigger: GGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTT...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATAAAGACCATGTCTGGCTaGGAGTGCAGCGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNIKTMSG*ECSVPE
Trigger: CTCAGGCACGCTGCACTCCCAGCCAGACATGGTCTT...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GGCAGTGCTAGCTCGCGATTCCAGGATGTAGTTAACCTTGAGCACAATTTCATTGAACCTGAAACTTTCTaGGATCCTTTTCTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: GSASSRFQDVVNLEHNFIEPETF*DPFLRF
Trigger: GAAGCGAAGAAAAGGATCCCAGAAAGTTTCAGGTTC...AATGAAATTGTGCTCAAGGTTAACTACATCCTGGAATCGCGAGCTAGCACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR TCA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAATGTGACTGTCGAATATaGGCTAGAATGATAGTTGGA +
Preference number: 4 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQCDCRI*ARMIVG
Trigger: TCCAACTATCATTCTAGCTCATATTCGACAGTCACA...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAACAACATCATGATCAATaGGAACCATCTCACACATTC +
Preference number: 4 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQQHHDQ*EPSHTF
Trigger: GAATGTGTGAGATGGTTCTCATTGATCATGATGTTG...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAATCTAGGTCAACATCATaGTCAATGAGAACCATCTCA +
Preference number: 4 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQSRSTS*SMRTIS
Trigger: TGAGATGGTTCTCATTGATCATGATGTTGACCTAGA...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAATCTTTGAGCTGTGTTTaGGCGTCTTCTAATACCAAA +
Preference number: 4 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQSLSCV*ASSNTK
Trigger: TTTGGTATTAGAAGACGCTCAAACACAGCTCAAAGA...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTAGTCGTTCTAATCTTTaGGCTGTGTTTGAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSSRSNL*AVFERL
Trigger: AAGACGCTCAAACACAGCTCAAAGATTAGAACGACT...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAATAAGGGAGAATCCATaGGCAGCATTTATTCGAACA +
Preference number: 4 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQIRENP*AAFIRT
Trigger: TGTTCGAATAAATGCTGCTCATGGATTCTCCCTTAT...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTGCGGTACTGAGGGCCTaGAACTTTCTGGGATCCTTT +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFAVLRA*NFLGSF
Trigger: AAAGGATCCCAGAAAGTTTCAGGCCCTCAGTACCGC...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATATTCTCCAGGCGGTACTaGGGGCCTGAAACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNIFSRRY*GPETFW
Trigger: CCAGAAAGTTTCAGGCCCTCAGTACCGCCTGGAGAA...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp AAATGCCAAAACTGGTTGATGGGGATCCAGGGTGCTAAATCACACTGCAGAGGAAACTCCTGGGCTGATTaGTTAGAATTTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KCQNWLMGIQGAKSHCRGNSWAD*LEFLSF
Trigger: GAAAGAAAGAAATTCTAAGCAATCAGCCCAGGAGTT...TCCTCTGCAGTGTGATTTAGCACCCTGGATCCCCATCAACCAGTTTTGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR GCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCTACCTACATGACCCTTaGCATCAAATTTGGAATACT +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPYLHDP*HQIWNT
Trigger: AGTATTCCAAATTTGATGGCAAGGGTCATGTAGGTA...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCCACTCAGCTTTAAGATaGTGTTTTAGACACATCTCT +
Preference number: 4 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPHSALR*CFRHIS
Trigger: AGAGATGTGTCTAAAACAGCATCTTAAAGCTGAGTG...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGATGTCACCACGGTCATTaGCAGCAGTCTGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGCHHGH*QQSVLA
Trigger: AGCCAGGACAGACTGCTGCCAATGACCGTGGTGACA...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTTTGCAAGGAAATGTGTaGGCACGGCTCTGTACATCC +
Preference number: 4 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLLQGNV*ARLCTS
Trigger: GGATGTACAGAGCCGTGCCCACACATTTCCTTGCAA...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACAATAAATGCCAAAACTaGTTGATGGGGATCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TEFPVMAKVSDIQSSTQNNKCQN*LMGIQG
Trigger: ACCCTGGATCCCCATCAACCAGTTTTGGCATTTATT...GTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTTCTTTGAGCTGTGTTTaGGCGTCTTCTAATACCAAA +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSSLSCV*ASSNTK
Trigger: TTTGGTATTAGAAGACGCTCAAACACAGCTCAAAGA...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATAGCGGTACTGAGGGCCTaGAACTTTCTGGGATCCTTT +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNIAVLRA*NFLGSF
Trigger: AAAGGATCCCAGAAAGTTTCAGGCCCTCAGTACCGC...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTTCTCCTTCTGGAAGCTaGAGCTCGTACGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFSPSGS*SSYVCS
Trigger: TGAACAGACGTACGAGCTTCAGCTTCCAGAAGGAGA...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GGAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTGAACAAAGATCAGAATACAGATAATATCGACTaGTTCCCAGAAATTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GMEDIRKGRSCWLNKDQNTDNID*FPEIGG
Trigger: GCCTCCAATTTCTGGGAAGCAGTCGATATTATCTGT...ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCAATGCATTCAAATAAATaGCAAAACTGGTTGATGGGG +
Preference number: 4 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPMHSNK*QNWLMG
Trigger: CCCCATCAACCAGTTTTGGCATTTATTTGAATGCAT...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTAGACATCGATCTTCTTaGTTGCTGTTGTACCTACAT +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSRHRSS*LLLYLH
Trigger: ATGTAGGTACAACAGCAACCAAGAAGATCGATGTCT...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACAGACATCGATCTTCTTaGTTGCTGTTGTACCTACAT +
Preference number: 4 (lower is better)
Translates to: TEFPVMAKVSDIQSSTQNRHRSS*LLLYLH
Trigger: ATGTAGGTACAACAGCAACCAAGAAGATCGATGTCT...GTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR TCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTCTGAAGCCAAACTTATaGATGGGCTCATTGGAATCC +
Preference number: 4 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLLKPNL*MGSLES
Trigger: GGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAG...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp ACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACTACCTACATGACCCTTaGCATCAAATTTGGAATACT +
Preference number: 4 (lower is better)
Translates to: TEFPVMAKVSDIQSSTQNYLHDP*HQIWNT
Trigger: AGTATTCCAAATTTGATGGCAAGGGTCATGTAGGTA...GTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CCA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTAGTGACTTTAACTCCTaGGCTGATTGCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSSDFNS*ADCLEF
Trigger: AAATTCTAAGCAATCAGCCCAGGAGTTAAAGTCACT...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
CDS-3UTR CCA 90 bp ACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACAGTGACTTTAACTCCTaGGCTGATTGCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: TEFPVMAKVSDIQSSTQNSDFNS*ADCLEF
Trigger: AAATTCTAAGCAATCAGCCCAGGAGTTAAAGTCACT...GTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGATTGCAAGGAAATGTGTaGGCACGGCTCTGTACATCC +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGLQGNV*ARLCTS
Trigger: GGATGTACAGAGCCGTGCCCACACATTTCCTTGCAA...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATATTCCCGTGTCATCACTaGTCACATGTGACTGTCGAA +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNIFPCHH*SHVTVE
Trigger: TTCGACAGTCACATGTGACCAGTGATGACACGGGAA...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTGATTTCTTCTCCTTCTaGAAGCTGAAGCTCGTACGT +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFDFFSF*KLKLVR
Trigger: ACGTACGAGCTTCAGCTTCCAGAAGGAGAAGAAATC...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTAAAGGACGCTCCTGTTaGCTGAACAAAGATCAGAAT +
Preference number: 4 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLKGRSC*LNKDQN
Trigger: ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTT...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTATAAGGGAGAATCCATaGGCAGCATTTATTCGAACA +
Preference number: 4 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLIRENP*AAFIRT
Trigger: TGTTCGAATAAATGCTGCTCATGGATTCTCCCTTAT...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGACAGGTCGGAATCGATTaGGATGGGTTTCTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGQVGID*DGFLLN
Trigger: ATTAAGCAGAAACCCATCTCAATCGATTCCGACCTG...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTAGTTTAAATATTGCGTaGCTGGGGCTTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLSLNIA*LGLFSS
Trigger: TGAAGAGAAAAGCCCCAGTCACGCAATATTTAAACT...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTAAGAATTCATCAGCATaGCCCCTTGTGCAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLKNSSA*PLVQRN
Trigger: ATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTT...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTATCGATCTTCTTGGTTaGTGTTGTACCTACATGACC +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFIDLLG*CCTYMT
Trigger: GGTCATGTAGGTACAACAGCAACCAAGAAGATCGAT...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGAAGCCAAACTTATGAATaGGCTCATTGGAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGSQTYE*AHWNPA
Trigger: CGCTGGATTCCAATGAGCCCATTCATAAGTTTGGCT...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR TCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTTCTAGGTCAACATCATaGTCAATGAGAACCATCTCA +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFSRSTS*SMRTIS
Trigger: TGAGATGGTTCTCATTGATCATGATGTTGACCTAGA...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATACAACATCATGATCAATaGGAACCATCTCACACATTC +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNIQHHDQ*EPSHTF
Trigger: GAATGTGTGAGATGGTTCTCATTGATCATGATGTTG...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGATCTAGGTCAACATCATaGTCAATGAGAACCATCTCA +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGSRSTS*SMRTIS
Trigger: TGAGATGGTTCTCATTGATCATGATGTTGACCTAGA...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR TCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGAAGTTTAAATATTGCGTaGCTGGGGCTTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGSLNIA*LGLFSS
Trigger: TGAAGAGAAAAGCCCCAGTCACGCAATATTTAAACT...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTTACCTACATGACCCTTaGCATCAAATTTGGAATACT +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFYLHDP*HQIWNT
Trigger: AGTATTCCAAATTTGATGGCAAGGGTCATGTAGGTA...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTTACCCTCGAAGCAAATaGACTCATTTAAACAAATGG +
Preference number: 4 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFYPRSK*THLNKW
Trigger: CCATTTGTTTAAATGAGTGCATTTGCTTCGAGGGTA...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATAAGACATCGATCTTCTTaGTTGCTGTTGTACCTACAT +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNIRHRSS*LLLYLH
Trigger: ATGTAGGTACAACAGCAACCAAGAAGATCGATGTCT...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR GCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATATACCTACATGACCCTTaGCATCAAATTTGGAATACT +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNIYLHDP*HQIWNT
Trigger: AGTATTCCAAATTTGATGGCAAGGGTCATGTAGGTA...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CCA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATAAGTGACTTTAACTCCTaGGCTGATTGCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: AFPICLFNMGTDFKESNISDFNS*ADCLEF
Trigger: AAATTCTAAGCAATCAGCCCAGGAGTTAAAGTCACT...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
CDS-3UTR CCA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGAAGTGACTTTAACTCCTaGGCTGATTGCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGSDFNS*ADCLEF
Trigger: AAATTCTAAGCAATCAGCCCAGGAGTTAAAGTCACT...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
CDS-3UTR CAA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTTGGACTCTAGGGCACTaGGCCCTGGCAGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGWTLGH*ALAGRL
Trigger: GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CAA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCTTGTCACCACGGTCATaGGCAGCAGTCTGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGLSPRS*AAVCPG
Trigger: GCCAGGACAGACTGCTGCCAATGACCGTGGTGACAA...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACTGGACTCTAGGGCACTaGGCCCTGGCAGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDWTLGH*ALAGRL
Trigger: GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CAA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTGGACTCTAGGGCACTaGGCCCTGGCAGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGWTLGH*ALAGRL
Trigger: GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CAA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCTTGTCACCACGGTCATaGGCAGCAGTCTGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLLSPRS*AAVCPG
Trigger: GCCAGGACAGACTGCTGCCAATGACCGTGGTGACAA...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS GCA 90 bp CTTCTTAAGGCAGCGCAGGCAGCACCGCAGCACCCTATCTGCTCCTaGCGCCATGTGTCAGCACTCGGCCTGAGGCAGTCCACGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LLKAAQAAPQHPICS*RHVSALGLRQSTGA
Trigger: TGCTCCCGTGGACTGCCTCAGGCCGAGTGCTGACACATGGCGGCAGGAGCAGATAGGGTGCTGCGGTGCTGCCTGCGCTGCCTTAAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483937.5
ENST00000496063.1
CDS-3UTR CAA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGCCCTGGCGCTGGCCATaGTCACCACGGTCATTGGCA +
Preference number: 5 (lower is better)
Translates to: TSGHRVDSRALGPGRQALPWRWP*SPRSLA
Trigger: TGCCAATGACCGTGGTGACAATGGCCAGCGCCAGGG...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCGCACTGACATTGTCATaGAGCTTCGGCTCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLALTLS*SFGSRP
Trigger: AGGACGGGAGCCGAAGCTCAATGACAATGTCAGTGC...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACAGGTCAACGGCGACATaGGGCTCGCTCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDRSTAT*GSLCFS
Trigger: GGAGAAGCAGAGCGAGCCCAATGTCGCCGTTGACCT...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS GCA 90 bp TCTCAGCTTCTTAAGGCAGCGCAGGCAGCACCGCAGCACCCTATCTaGTCCTGCCGCCATGTGTCAGCACTCGGCCTGAGGCAGTCCACG +
Preference number: 5 (lower is better)
Translates to: SQLLKAAQAAPQHPI*SCRHVSALGLRQST
Trigger: CGTGGACTGCCTCAGGCCGAGTGCTGACACATGGCGGCAGGAGCAGATAGGGTGCTGCGGTGCTGCCTGCGCTGCCTTAAGAAGCTGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483937.5
ENST00000496063.1
CDS-3UTR CAA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGTCTTCTTGGTTGCTGTaGTACCTACATGACCCTTGC +
Preference number: 5 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGSSWLL*YLHDPC
Trigger: GCAAGGGTCATGTAGGTACAACAGCAACCAAGAAGA...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTTGTCACCACGGTCATaGGCAGCAGTCTGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLLSPRS*AAVCPG
Trigger: GCCAGGACAGACTGCTGCCAATGACCGTGGTGACAA...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCCCCTGGCGCTGGCCATaGTCACCACGGTCATTGGCA +
Preference number: 5 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAPWRWP*SPRSLA
Trigger: TGCCAATGACCGTGGTGACAATGGCCAGCGCCAGGG...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTGGACTCTAGGGCACTaGGCCCTGGCAGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPWTLGH*ALAGRL
Trigger: GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR CAA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCCAGCTTTCCGCCTGCTaGAAAAAGGAGGCAGGCGCT +
Preference number: 5 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGQLSAC*KKEAGA
Trigger: AGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTG...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCACTGTCTCCAGGCATaGAAGGAGGATGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGHCLQA*KEDESS
Trigger: AGAAGATTCATCCTCCTTCAATGCCTGGAGACAGTG...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CAA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCGCACTGACATTGTCATaGAGCTTCGGCTCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGALTLS*SFGSRP
Trigger: AGGACGGGAGCCGAAGCTCAATGACAATGTCAGTGC...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCGCACTGACATTGTCATaGAGCTTCGGCTCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLALTLS*SFGSRP
Trigger: AGGACGGGAGCCGAAGCTCAATGACAATGTCAGTGC...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp GAGGCTGGAGGCCAGTGTCACTGCTGCCCGGATTTCTTCTCCTTCTGGAAGCTGTGGACTCTAGGGCACTaGGCCCTGGCAGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: EAGGQCHCCPDFFSFWKLWTLGH*ALAGRL
Trigger: GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA...CAGCTTCCAGAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCCAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR CAA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCGAAAGTGACACGGCCTaGGACACACCACTAGGTCTC +
Preference number: 5 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGESDTA*DTPLGL
Trigger: GAGACCTAGTGGTGTGTCCAAGGCCGTGTCACTTTC...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCAGAAAGTGACACGGCCTaGGACACACCACTAGGTCTC +
Preference number: 5 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAAESDTA*DTPLGL
Trigger: GAGACCTAGTGGTGTGTCCAAGGCCGTGTCACTTTC...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS TCA 90 bp AAGGGGAGTGAGTGGGTTGTGGGCAGAAGCAGCACTGTCTCCCTGTaGGCAGAGCACCAGGAGAAGAGGGCTGCTGCACACACGGTCCCT +
Preference number: 5 (lower is better)
Translates to: KGSEWVVGRSSTVSL*AEHQEKRAAAHTVP
Trigger: AGGGACCGTGTGTGCAGCAGCCCTCTTCTCCTGGTGCTCTGCTCACAGGGAGACAGTGCTGCTTCTGCCCACAACCCACTCACTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS GCA 90 bp TCTCGCGGACCAGGCAGAACTCCCATGCGCTCTGGCTCTCCAAAGTaGTGTCCAGGTCAACGGCGACATTGGGCTCGCTCTGCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SRGPGRTPMRSGSPK*CPGQRRHWARSASP
Trigger: TGGAGAAGCAGAGCGAGCCCAATGTCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTGGTCCGCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000473837.5
CDS GCA 90 bp CGAGGCGGCCAACGTACTGTTCTCGCGGACCAGGCAGAACTCCCATaGGCTCTGGCTCTCCAAAGTGCTGTCCAGGTCAACGGCGACATT +
Preference number: 5 (lower is better)
Translates to: RGGQRTVLADQAELP*ALALQSAVQVNGDI
Trigger: AATGTCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTGGTCCGCGAGAACAGTACGTTGGCCGCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS CCA 90 bp GATCAGGTCCTGCACCCTGGCGCTGGCCATTGTCACCACGGTCATTaGCAGCAGTCTGTCCTGGCTCGAGTGCAGAGGGAGGTAGACATC +
Preference number: 5 (lower is better)
Translates to: DQVLHPGAGHCHHGH*QQSVLARVQREVDI
Trigger: GATGTCTACCTCCCTCTGCACTCGAGCCAGGACAGACTGCTGCCAATGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAGGACCTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000420643.5
ENST00000427078.5
ENST00000448439.1
ENST00000468896.1
ENST00000473837.5
ENST00000497932.5
CDS CCA 90 bp GCCCTTGAACTGTTCTCGCGGACCAGGCAGAACTCCCATGCGCTCTaGCTCTCCAAAGTGCTGTCCAGGTCAACGGCGACATTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: ALELFSRTRQNSHAL*LSKVLSRSTATLGS
Trigger: CGAGCCCAATGTCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTGGTCCGCGAGAACAGTTCAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS CCA 90 bp GCCAACGTACTGTTCTCGCGGACCAGGCAGAACTCCCATGCGCTCTaGCTCTCCAAAGTGCTGTCCAGGTCAACGGCGACATTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: ANVLFSRTRQNSHAL*LSKVLSRSTATLGS
Trigger: CGAGCCCAATGTCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTGGTCCGCGAGAACAGTACGTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS-3UTR CAA 90 bp GGGCCCCCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGAGAATGATAGTTGGATaGTCCAAGAAGGCCATCCTT +
Preference number: 5 (lower is better)
Translates to: GPPTPSPRAHLPCASEPGRMIVG*SKKAIL
Trigger: AAGGATGGCCTTCTTGGACAATCCAACTATCATTCT...CCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGGGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CAA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCAGGTCAACGGCGACATaGGGCTCGCTCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLRSTAT*GSLCFS
Trigger: GGAGAAGCAGAGCGAGCCCAATGTCGCCGTTGACCT...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGAAAGTGACACGGCCTaGGACACACCACTAGGTCTC +
Preference number: 5 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWESDTA*DTPLGL
Trigger: GAGACCTAGTGGTGTGTCCAAGGCCGTGTCACTTTC...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCACAGCTTTCCGCCTGCTaGAAAAAGGAGGCAGGCGCT +
Preference number: 5 (lower is better)
Translates to: SVKHRSPALAGDSKDITAQLSAC*KKEAGA
Trigger: AGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTG...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCATCAGCATGACCCCTaGTGCAAAGAAATACACTCA +
Preference number: 5 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGHQHDP*CKEIHS
Trigger: TGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATG...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS GCA 90 bp CGTCCTTCGCTTGTATACTGCCAGCAGATGAGCCCGATCAGGTCCTaGACCCTGGCGCTGGCCATTGTCACCACGGTCATTGGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: RPSLVYCQQMSPIRS*TLALAIVTTVIGSS
Trigger: ACTGCTGCCAATGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000420643.5
ENST00000427078.5
ENST00000448439.1
ENST00000468896.1
ENST00000473837.5
ENST00000497932.5
CDS GCA 90 bp CTGACATTGTCATTGAGCTTCGGCTCCCGTCCTTCGCTTGTATACTaGCAGCAGATGAGCCCGATCAGGTCCTGCACCCTGGCGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LTLSLSFGSRPSLVY*QQMSPIRSCTLALA
Trigger: GGCCAGCGCCAGGGTGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGGACGGGAGCCGAAGCTCAATGACAATGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000420643.5
ENST00000427078.5
ENST00000468896.1
ENST00000473837.5
ENST00000497932.5
CDS GCA 90 bp TCAGTTTCTCTCTTGAGCTTCGGCTCCCGTCCTTCGCTTGTATACTaGCAGCAGATGAGCCCGATCAGGTCCTGCACCCTGGCGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SVSLLSFGSRPSLVY*QQMSPIRSCTLALA
Trigger: GGCCAGCGCCAGGGTGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGGACGGGAGCCGAAGCTCAAGAGAGAAACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448439.1
CDS CCA 90 bp CCAGAGATACTGTTCTCGCGGACCAGGCAGAACTCCCATGCGCTCTaGCTCTCCAAAGTGCTGTCCAGGTCAACGGCGACATTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: PEILFSRTRQNSHAL*LSKVLSRSTATLGS
Trigger: CGAGCCCAATGTCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTGGTCCGCGAGAACAGTATCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373511.6
CDS-3UTR CAA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCAGAATGATAGTTGGATaGTCCAAGAAGGCCATCCTT +
Preference number: 5 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGRMIVG*SKKAIL
Trigger: AAGGATGGCCTTCTTGGACAATCCAACTATCATTCT...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CAA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTTGTCACCACGGTCATaGGCAGCAGTCTGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPLSPRS*AAVCPG
Trigger: GCCAGGACAGACTGCTGCCAATGACCGTGGTGACAA...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCAGCACTGACATTGTCATaGAGCTTCGGCTCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: SVKHRSPALAGDSKDITAALTLS*SFGSRP
Trigger: AGGACGGGAGCCGAAGCTCAATGACAATGTCAGTGC...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCACAAAGAGTGACTCTTaGGATGTCAGACCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLTKSDS*DVRPGD
Trigger: ATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTGT...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTGGGTCTATCTCTACTTaGTCTCCAGAGATACCTAGC +
Preference number: 5 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGGSIST*SPEIPS
Trigger: GCTAGGTATCTCTGGAGACAAAGTAGAGATAGACCC...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CAA 90 bp CCGACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCAGTTTTCTTTGTTTTaGAGCAAAGTAGTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: PTPSPRAHLPCASEPGAGQFSLF*SKVVSP
Trigger: CGGGCTGACTACTTTGCTCAAAAACAAAGAAAACTG...GCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR CAA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCTGGACTCTAGGGCACTaGGCCCTGGCAGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: WSDPQASLIKATAKQTSVWTLGH*ALAGRL
Trigger: GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CAA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGAAAGTGACACGGCCTaGGACACACCACTAGGTCTC +
Preference number: 5 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLESDTA*DTPLGL
Trigger: GAGACCTAGTGGTGTGTCCAAGGCCGTGTCACTTTC...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCCAGCTTTCCGCCTGCTaGAAAAAGGAGGCAGGCGCT +
Preference number: 5 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPQLSAC*KKEAGA
Trigger: AGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTG...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACAAACCCCGTCTGCCCTaGAACCTGAAACTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDKPRLP*NLKLSG
Trigger: CCCAGAAAGTTTCAGGTTCAAGGGCAGACGGGGTTT...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350766.7
CDS-3UTR CAA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCGCAGACAGCCCCCTCTaGCTCTCTGCAAGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPADSPL*LSARSD
Trigger: ATCACTCCTTGCAGAGAGCAAGAGGGGGCTGTCTGC...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS GCA 90 bp CAGCACTGTCTCCCTGTGAGCAGAGCACCAGGAGAAGAGGGCTGCTaGACACACGGTCCCTGTAGCTCAGACTCCTTAAGGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: QHCLPVSRAPGEEGC*THGPCSSDSLRQRP
Trigger: AGGCCTTTGCCTTAAGGAGTCTGAGCTACAGGGACCGTGTGTGCAGCAGCCCTCTTCTCCTGGTGCTCTGCTCACAGGGAGACAGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS CCA 90 bp ATGCGCTCTGGCTCTCCAAAGTGCTGTCCAGGTCAACGGCGACATTaGGCTCGCTCTGCTTCTCCAGGCGGTACTGAGGGCCTGAAACTT +
Preference number: 5 (lower is better)
Translates to: MRSGSPKCCPGQRRH*ARSASPGGTEGLKL
Trigger: AAGTTTCAGGCCCTCAGTACCGCCTGGAGAAGCAGAGCGAGCCCAATGTCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGAGCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000473837.5
CDS-3UTR CAA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTGGCGCTGGCCATaGTCACCACGGTCATTGGCA +
Preference number: 5 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSAPWRWP*SPRSLA
Trigger: TGCCAATGACCGTGGTGACAATGGCCAGCGCCAGGG...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp ATTGAGGCTGGAGGCCAGTGTCACTGCTGCCCGGATTTCTTCTCCTTCTGGAAGCCCTGGCGCTGGCCATaGTCACCACGGTCATTGGCA +
Preference number: 5 (lower is better)
Translates to: IEAGGQCHCCPDFFSFWKPWRWP*SPRSLA
Trigger: TGCCAATGACCGTGGTGACAATGGCCAGCGCCAGGG...CTTCCAGAAGGAGAAGAAATCCGGGCAGCAGTGACACTGGCCTCCAGCCTCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR CAA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCAGGTCAACGGCGACATaGGGCTCGCTCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSRSTAT*GSLCFS
Trigger: GGAGAAGCAGAGCGAGCCCAATGTCGCCGTTGACCT...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCTGTGGCTATGTCAATTaGCGAATCCTCCTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLCGYVN*RILLKN
Trigger: GTTTTTGAGGAGGATTCGCAAATTGACATAGCCACA...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp GCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACGGGTCTATCTCTACTTaGTCTCCAGAGATACCTAGC +
Preference number: 5 (lower is better)
Translates to: AGIEGGWAARGSSRGWSDGSIST*SPEIPS
Trigger: GCTAGGTATCTCTGGAGACAAAGTAGAGATAGACCC...GTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CAA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTTGAGCACAATTTCATaGACGGTAGCAGCGTCCGAT +
Preference number: 5 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGLSTIS*TVAASD
Trigger: ATCGGACGCTGCTACCGTCAATGAAATTGTGCTCAA...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CAA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTTGAGCACAATTTCATaGACGGTAGCAGCGTCCGAT +
Preference number: 5 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLLSTIS*TVAASD
Trigger: ATCGGACGCTGCTACCGTCAATGAAATTGTGCTCAA...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR CAA 90 bp ACACCTTCCCCGAGAGCCCACCTGCCCTGTGCCAGTGAGCCAGGGGCTGGCCTCCAGTTTTCTTTGTTTTaGAGCAAAGTAGTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: TPSPRAHLPCASEPGAGLQFSLF*SKVVSP
Trigger: CGGGCTGACTACTTTGCTCAAAAACAAAGAAAACTG...GAGGCCAGCCCCTGGCTCACTGGCACAGGGCAGGTGGGCTCTCGGGGAAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR CAA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCGAAAGTGACACGGCCTaGGACACACCACTAGGTCTC +
Preference number: 5 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLESDTA*DTPLGL
Trigger: GAGACCTAGTGGTGTGTCCAAGGCCGTGTCACTTTC...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCATCAGCATGACCCCTaGTGCAAAGAAATACACTCA +
Preference number: 5 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGHQHDP*CKEIHS
Trigger: TGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATG...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS GCA 90 bp AAGCAGCACTGTCTCCCTGTGAGCAGAGCACCAGGAGAAGAGGGCTaGTGCACACACGGTCCCTGTAGCTCAGACTCCTTAAGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: KQHCLPVSRAPGEEG*CTHGPCSSDSLRQR
Trigger: CCTTTGCCTTAAGGAGTCTGAGCTACAGGGACCGTGTGTGCAGCAGCCCTCTTCTCCTGGTGCTCTGCTCACAGGGAGACAGTGCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS-3UTR CAA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGCACTGTCTCCAGGCATaGAAGGAGGATGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: TSGHRVDSRALGPGRQALHCLQA*KEDESS
Trigger: AGAAGATTCATCCTCCTTCAATGCCTGGAGACAGTG...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CAA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCCATCGATCTTCTTGGTaGCTGTTGTACCTACATGAC +
Preference number: 5 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGHRSSW*LLYLHD
Trigger: GTCATGTAGGTACAACAGCAACCAAGAAGATCGATG...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp CGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCAACAAAGAGTGACTCTTaGGATGTCAGACCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: RLCTSSGRVAGIEGGWAATKSDS*DVRPGD
Trigger: ATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTGT...TGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCACAAAGAGTGACTCTTaGGATGTCAGACCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGTKSDS*DVRPGD
Trigger: ATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTGT...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTTGTGGCTATGTCAATTaGCGAATCCTCCTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: GWQALKVAGRHVAPLGGGCGYVN*RILLKN
Trigger: GTTTTTGAGGAGGATTCGCAAATTGACATAGCCACA...ACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CAA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGGGTCTATCTCTACTTaGTCTCCAGAGATACCTAGC +
Preference number: 5 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWGSIST*SPEIPS
Trigger: GCTAGGTATCTCTGGAGACAAAGTAGAGATAGACCC...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CAA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGGGTCTATCTCTACTTaGTCTCCAGAGATACCTAGC +
Preference number: 5 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVGSIST*SPEIPS
Trigger: GCTAGGTATCTCTGGAGACAAAGTAGAGATAGACCC...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CAA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGGGGTCTATCTCTACTTaGTCTCCAGAGATACCTAGC +
Preference number: 5 (lower is better)
Translates to: TSGHRVDSRALGPGRQALGSIST*SPEIPS
Trigger: GCTAGGTATCTCTGGAGACAAAGTAGAGATAGACCC...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp TCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTCAGTTTTCTTTGTTTTaGAGCAAAGTAGTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: SSGRVAGIEGGWAARGSSQFSLF*SKVVSP
Trigger: CGGGCTGACTACTTTGCTCAAAAACAAAGAAAACTG...AGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CAA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCCATCAGCATGACCCCTaGTGCAAAGAAATACACTCA +
Preference number: 5 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGHQHDP*CKEIHS
Trigger: TGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATG...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCCATCAGCATGACCCCTaGTGCAAAGAAATACACTCA +
Preference number: 5 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLHQHDP*CKEIHS
Trigger: TGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATG...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGGCAAAAGGACGCTCCTGTaGGCTGAACAAAGATCAGAA +
Preference number: 5 (lower is better)
Translates to: CTSSGRVAGIEGGWAARGKRTLL*AEQRSE
Trigger: TTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTT...GCCACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCAAAAGGACGCTCCTGTaGGCTGAACAAAGATCAGAA +
Preference number: 5 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTKRTLL*AEQRSE
Trigger: TTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTT...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCGTGGAGCACTTGTGTTaGGACTTGAACAATGACACA +
Preference number: 5 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLVEHLC*DLNNDT
Trigger: TGTGTCATTGTTCAAGTCCAAACACAAGTGCTCCAC...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR CAA 90 bp GGACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCCCCTTGCCATCAAATTaGGAATACTCGTTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: GLQDTGWTLGHLALAGRLPLPSN*EYSLKG
Trigger: CCCTTTTAACGAGTATTCCAAATTTGATGGCAAGGG...GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTTTGTCACCACGGTCATaGGCAGCAGTCTGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSALSPRS*AAVCPG
Trigger: GCCAGGACAGACTGCTGCCAATGACCGTGGTGACAA...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp GGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCGCACTGACATTGTCATaGAGCTTCGGCTCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: GLTPKHRLSKPLPSRLPSALTLS*SFGSRP
Trigger: AGGACGGGAGCCGAAGCTCAATGACAATGTCAGTGC...GGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGACAAAGAGTGACTCTTaGGATGTCAGACCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVTKSDS*DVRPGD
Trigger: ATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTGT...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCATTGAGCACAATTTCATaGACGGTAGCAGCGTCCGAT +
Preference number: 5 (lower is better)
Translates to: SVKHRSPALAGDSKDITALSTIS*TVAASD
Trigger: ATCGGACGCTGCTACCGTCAATGAAATTGTGCTCAA...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp CAGGCATTGAAGGTGGCTGGGCGGCACGTGGCTCCTCTAGGGGGTGGTCTGACCCAGTTTTCTTTGTTTTaGAGCAAAGTAGTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: QALKVAGRHVAPLGGGLTQFSLF*SKVVSP
Trigger: CGGGCTGACTACTTTGCTCAAAAACAAAGAAAACTG...GGTCAGACCACCCCCTAGAGGAGCCACGTGCCGCCCAGCCACCTTCAATGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CAA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCAGCTTTCCGCCTGCTaGAAAAAGGAGGCAGGCGCT +
Preference number: 5 (lower is better)
Translates to: WSDPQASLIKATAKQTSVQLSAC*KKEAGA
Trigger: AGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTG...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TGGGCACGGCTCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGCATCAGCATGACCCCTaGTGCAAAGAAATACACTCA +
Preference number: 5 (lower is better)
Translates to: WARLCTSSGRVAGIEGGWHQHDP*CKEIHS
Trigger: TGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATG...CCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACAAAAGGACGCTCCTGTaGGCTGAACAAAGATCAGAA +
Preference number: 5 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDKRTLL*AEQRSE
Trigger: TTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTT...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp ACTTCAGGACACCGGGTGGACTCTAGGGCACTTGGCCCTGGCAGGCAGGCTCTGAAAAGGACGCTCCTGTaGGCTGAACAAAGATCAGAA +
Preference number: 5 (lower is better)
Translates to: TSGHRVDSRALGPGRQALKRTLL*AEQRSE
Trigger: TTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTT...CAGAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCACCCGGTGTCCTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS GCA 90 bp TTTGTCTCCAGAGATACTGTTCTCGCGGACCAGGCAGAACTCCCATaGGCTCTGGCTCTCCAAAGTGCTGTCCAGGTCAACGGCGACATT +
Preference number: 5 (lower is better)
Translates to: FVSRDTVLADQAELP*ALALQSAVQVNGDI
Trigger: AATGTCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTGGTCCGCGAGAACAGTATCTCTGGAGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373511.6
CDS GCA 90 bp GTCCTGGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTTaGTGTTGTACCTACATGACCCCGGTCTTCCCCCAGAGCTTCACT +
Preference number: 5 (lower is better)
Translates to: VLARVQREVDIDLLG*CCTYMTPVFPQSFT
Trigger: AGTGAAGCTCTGGGGGAAGACCGGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS CCA 90 bp GTCTGTCCTGGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTaGTTGCTGTTGTACCTACATGACCCCGGTCTTCCCCCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: VCPGSSAEGGRHRSS*LLLYLHDPGLPPEL
Trigger: AAGCTCTGGGGGAAGACCGGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCCAGGACAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS CCA 90 bp ACTTGTCACTGCCACTTCTCTATGCTAAGGGGAGTGAGTGGGTTGTaGGCAGAAGCAGCACTGTCTCCCTGTGAGCAGAGCACCAGGAGA +
Preference number: 5 (lower is better)
Translates to: TCHCHFSMLRGVSGL*AEAALSPCEQSTRR
Trigger: TCTCCTGGTGCTCTGCTCACAGGGAGACAGTGCTGCTTCTGCCCACAACCCACTCACTCCCCTTAGCATAGAGAAGTGGCAGTGACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS-3UTR CAA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGTTTCTCCTCTTCATATaGTTTCACGAGCTCACCTAC +
Preference number: 5 (lower is better)
Translates to: CQADFRPMAMSPALPPRGFLLFI*FHELTY
Trigger: GTAGGTGAGCTCGTGAAACAATATGAAGAGGAGAAA...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CAA 90 bp TGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAGGGGGAGAATGATAGTTGGATaGTCCAAGAAGGCCATCCTT +
Preference number: 5 (lower is better)
Translates to: CQADFRPMAMSPALPPRGRMIVG*SKKAIL
Trigger: AAGGATGGCCTTCTTGGACAATCCAACTATCATTCT...CCCCCTAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CAA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGCACTGACATTGTCATaGAGCTTCGGCTCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHALTLS*SFGSRP
Trigger: AGGACGGGAGCCGAAGCTCAATGACAATGTCAGTGC...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCACAAAGAGTGACTCTTaGGATGTCAGACCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: AGGTLKRLSRTAEASGVATKSDS*DVRPGD
Trigger: ATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTGT...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTAACAAAGAGTGACTCTTaGGATGTCAGACCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLTKSDS*DVRPGD
Trigger: ATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTGT...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp TGCAGGTCCTCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACTGTGGCTATGTCAATTaGCGAATCCTCCTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: CRSSVKHRSPALAGDSKDCGYVN*RILLKN
Trigger: GTTTTTGAGGAGGATTCGCAAATTGACATAGCCACA...GTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGAGGACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CAA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCTTGAGCACAATTTCATaGACGGTAGCAGCGTCCGAT +
Preference number: 5 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLLSTIS*TVAASD
Trigger: ATCGGACGCTGCTACCGTCAATGAAATTGTGCTCAA...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
ENST00000497932.5
CDS-3UTR CAA 90 bp TCTGTACATCCTCGGGCAGGGTGGCAGGCATTGAAGGTGGCTGGGCGGCACGTGCAGTTTTCTTTGTTTTaGAGCAAAGTAGTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: SVHPRAGWQALKVAGRHVQFSLF*SKVVSP
Trigger: CGGGCTGACTACTTTGCTCAAAAACAAAGAAAACTG...CACGTGCCGCCCAGCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS CCA 90 bp GTCTGTCCTGGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTaGTTGCTGTTGTACCTACATGACCCTCAGGTGACGTGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: VCPGSSAEGGRHRSS*LLLYLHDPQVTWLL
Trigger: AAGCAGCCACGTCACCTGAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCCAGGACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420643.5
CDS CCA 90 bp AGTTTTGCTTCACAGGCTCCCAGTGCACCAGTGTTTCCAGAGGCCTaGCTCTGGACATGCCGTTCAGAGATCTGCTTCACACAATGTGCC +
Preference number: 5 (lower is better)
Translates to: SFASQAPSAPVFPEA*LWTCRSEICFTQCA
Trigger: GGCACATTGTGTGAAGCAGATCTCTGAACGGCATGTCCAGAGCCAGGCCTCTGGAAACACTGGTGCACTGGGAGCCTGTGAAGCAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437973.2
CDS-3UTR CAA 90 bp GCAGGAGGGACACTGAAGAGGCTGTCGAGGACTGCAGAGGCATCTGGTGTGGCCTTTCTCCTCTTCATATaGTTTCACGAGCTCACCTAC +
Preference number: 5 (lower is better)
Translates to: AGGTLKRLSRTAEASGVAFLLFI*FHELTY
Trigger: GTAGGTGAGCTCGTGAAACAATATGAAGAGGAGAAA...GGCCACACCAGATGCCTCTGCAGTCCTCGACAGCCTCTTCAGTGTCCCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CAA 90 bp TCAGTGAAACACCGGTCCCCGGCCCTGGCTGGGGACAGTAAGGACATCACCGCACCCTTGCCATCAAATTaGGAATACTCGTTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: SVKHRSPALAGDSKDITAPLPSN*EYSLKG
Trigger: CCCTTTTAACGAGTATTCCAAATTTGATGGCAAGGG...TGCGGTGATGTCCTTACTGTCCCCAGCCAGGGCCGGGGACCGGTGTTTCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCATCGATCTTCTTGGTaGCTGTTGTACCTACATGAC +
Preference number: 5 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLHRSSW*LLYLHD
Trigger: GTCATGTAGGTACAACAGCAACCAAGAAGATCGATG...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp GCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCTATGTGGCTATGTCAATTaGCGAATCCTCCTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: ATAKQTSVPWQCPQRSLLCGYVN*RILLKN
Trigger: GTTTTTGAGGAGGATTCGCAAATTGACATAGCCACA...TAGGAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp AAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTCCATCAGCATGACCCCTaGTGCAAAGAAATACACTCA +
Preference number: 5 (lower is better)
Translates to: KATAKQTSVPWQCPQRSLHQHDP*CKEIHS
Trigger: TGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATG...GAGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp CAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCTAAAAGGACGCTCCTGTaGGCTGAACAAAGATCAGAA +
Preference number: 5 (lower is better)
Translates to: QSHCQADFRPMAMSPALPKRTLL*AEQRSE
Trigger: TTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTT...AGGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS GCA 90 bp ACCAGACCAGTGAGCGTTTCCAAACACATGACTTCTAAGCAAGTTTaGAACGGACAAAGCGGGCATGGAGCGAGGCGGCCAACGTACTGT +
Preference number: 5 (lower is better)
Translates to: TRPVSVSKHMTSKQV*NGQSGHGARRPTYC
Trigger: ACAGTACGTTGGCCGCCTCGCTCCATGCCCGCTTTGTCCGTTGCAAACTTGCTTAGAAGTCATGTGTTTGGAAACGCTCACTGGTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS-3UTR CAA 90 bp TCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCCCAGAATGATAGTTGGATaGTCCAAGAAGGCCATCCTT +
Preference number: 5 (lower is better)
Translates to: SKPLPSRLPSHGNVPSAPRMIVG*SKKAIL
Trigger: AAGGATGGCCTTCTTGGACAATCCAACTATCATTCT...GGGAGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CAA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTTCTTCTTGGTTGCTGTaGTACCTACATGACCCTTGC +
Preference number: 5 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGSSWLL*YLHDPC
Trigger: GCAAGGGTCATGTAGGTACAACAGCAACCAAGAAGA...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAACCCTGGCGCTGGCCATaGTCACCACGGTCATTGGCA +
Preference number: 5 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQPWRWP*SPRSLA
Trigger: TGCCAATGACCGTGGTGACAATGGCCAGCGCCAGGG...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CAA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTGGGTCTATCTCTACTTaGTCTCCAGAGATACCTAGC +
Preference number: 5 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGGSIST*SPEIPS
Trigger: GCTAGGTATCTCTGGAGACAAAGTAGAGATAGACCC...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CAA 90 bp GGGAACAGAGGGCAGAGAACGTTCTGTGGAGCACTTGTGTTTGGACTTGAACAAGCACTGACATTGTCATaGAGCTTCGGCTCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: GNRGQRTFCGALVFGLEQALTLS*SFGSRP
Trigger: AGGACGGGAGCCGAAGCTCAATGACAATGTCAGTGC...TTGTTCAAGTCCAAACACAAGTGCTCCACAGAACGTTCTCTGCCCTCTGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR CAA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTACAAAGAGTGACTCTTaGGATGTCAGACCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGTKSDS*DVRPGD
Trigger: ATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTGT...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp CTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATTTGAGCACAATTTCATaGACGGTAGCAGCGTCCGAT +
Preference number: 5 (lower is better)
Translates to: LTPKHRLSKPLPSRLPSHLSTIS*TVAASD
Trigger: ATCGGACGCTGCTACCGTCAATGAAATTGTGCTCAA...ATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CAA 90 bp CCCTGGCAGGCAGGCTCTGAGCTACGGAACAGATTGAGGCTGGAGGCCAGTGTCAATATCATGCTATGTTaGTCAGCTTACTCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: PWQAGSELRNRLRLEASVNIMLC*SAYSFL
Trigger: CAGAAAGGAGTAAGCTGACAAACATAGCATGATATT...GACACTGGCCTCCAGCCTCAATCTGTTCCGTAGCTCAGAGCCTGCCTGCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS TCA 90 bp AATGTGCCACTGCAAAGCAGTCTGCGTAGCCTAGGTGCAGAGGCATaGAATACAATGCGAATGTCGTCCTCAGCATCTCTCTGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: NVPLQSSLRSLGAEA*NTMRMSSSASLWES
Trigger: TGACTCCCAGAGAGATGCTGAGGACGACATTCGCATTGTATTTCATGCCTCTGCACCTAGGCTACGCAGACTGCTTTGCAGTGGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437973.2
CDS-3UTR CAA 90 bp TTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCATGGCAATGTCCCCAGCGCTCATCGATCTTCTTGGTaGCTGTTGTACCTACATGAC +
Preference number: 5 (lower is better)
Translates to: LSKPLPSRLPSHGNVPSAHRSSW*LLYLHD
Trigger: GTCATGTAGGTACAACAGCAACCAAGAAGATCGATG...AGCGCTGGGGACATTGCCATGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000497932.5
CDS-3UTR CAA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCATTGTCACCACGGTCATaGGCAGCAGTCTGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPLSPRS*AAVCPG
Trigger: GCCAGGACAGACTGCTGCCAATGACCGTGGTGACAA...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CAA 90 bp AAATGCCAAAACTGGTTGATGGGGATCCAGGGTGCTAAATCACACTGCAGAGGAGCACTGACATTGTCATaGAGCTTCGGCTCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: KCQNWLMGIQGAKSHCRGALTLS*SFGSRP
Trigger: AGGACGGGAGCCGAAGCTCAATGACAATGTCAGTGC...TCCTCTGCAGTGTGATTTAGCACCCTGGATCCCCATCAACCAGTTTTGGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CAA 90 bp GAGGAATGGGGAATGTGGCCCCTTCCAAGGCAGCGAAGCAGAGAACATGCAGGTTGTGGCTATGTCAATTaGCGAATCCTCCTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: EEWGMWPLPRQRSREHAGCGYVN*RILLKN
Trigger: GTTTTTGAGGAGGATTCGCAAATTGACATAGCCACA...ACCTGCATGTTCTCTGCTTCGCTGCCTTGGAAGGGGCCACATTCCCCATTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS-3UTR CAA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCGAAAGTGACACGGCCTaGGACACACCACTAGGTCTC +
Preference number: 5 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPESDTA*DTPLGL
Trigger: GAGACCTAGTGGTGTGTCCAAGGCCGTGTCACTTTC...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TGGTCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCAAAAGGACGCTCCTGTaGGCTGAACAAAGATCAGAA +
Preference number: 5 (lower is better)
Translates to: WSDPQASLIKATAKQTSVKRTLL*AEQRSE
Trigger: TTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTT...GACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS CCA 90 bp GTCTGTCCTGGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTaGTTGCTGTTGTACCTACATGACCCTGATAGTTTCCAAAGTAGG +
Preference number: 5 (lower is better)
Translates to: VCPGSSAEGGRHRSS*LLLYLHDPDSFQSR
Trigger: CCTACTTTGGAAACTATCAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCCAGGACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR CAA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCACCCTTGCCATCAAATTaGGAATACTCGTTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: SDPQASLIKATAKQTSVPPLPSN*EYSLKG
Trigger: CCCTTTTAACGAGTATTCCAAATTTGATGGCAAGGG...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTTTGTCACCACGGTCATaGGCAGCAGTCTGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSLSPRS*AAVCPG
Trigger: GCCAGGACAGACTGCTGCCAATGACCGTGGTGACAA...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GGAATGGAAGACATTAGAAAAGGACGCTCCTGTTGGCTGAACAAAGATCAGAATAGGTCAACGGCGACATaGGGCTCGCTCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GMEDIRKGRSCWLNKDQNRSTAT*GSLCFS
Trigger: GGAGAAGCAGAGCGAGCCCAATGTCGCCGTTGACCT...ATTCTGATCTTTGTTCAGCCAACAGGAGCGTCCTTTTCTAATGTCTTCCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp TCTGACCCCCAAGCATCGCTTATCAAAGCCACTGCCAAGCAGACTTCCGTCCCACAGTTTTCTTTGTTTTaGAGCAAAGTAGTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: SDPQASLIKATAKQTSVPQFSLF*SKVVSP
Trigger: CGGGCTGACTACTTTGCTCAAAAACAAAGAAAACTG...TGGGACGGAAGTCTGCTTGGCAGTGGCTTTGATAAGCGATGCTTGGGGGTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000444226.1
CDS-3UTR CAA 90 bp TTGAGCAAAGTAGTCAGCCCGGGCAGTGCTAGCTCGCGATTCCAGGATGTAGTTCGTTCTGTGGAGCACTaGTGTTTGGACTTGAACAAT +
Preference number: 5 (lower is better)
Translates to: LSKVVSPGSASSRFQDVVRSVEH*CLDLNN
Trigger: ATTGTTCAAGTCCAAACACAAGTGCTCCACAGAACG...AACTACATCCTGGAATCGCGAGCTAGCACTGCCCGGGCTGACTACTTTGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS GCA 90 bp CCACAGTGCACATTTTCAGTTAGTGTGTATTCCTCGCAGAGAAGGTaGAAACCTAGAAGTTTTGCTTCACAGGCTCCCAGTGCACCAGTG +
Preference number: 5 (lower is better)
Translates to: PQCTFSVSVYSSQRR*KPRSFASQAPSAPV
Trigger: CACTGGTGCACTGGGAGCCTGTGAAGCAAAACTTCTAGGTTTGCACCTTCTCTGCGAGGAATACACACTAACTGAAAATGTGCACTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437973.2
CDS CCA 90 bp GTCTGTCCTGGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTaGTTGCTGTTGTACCTACATGACCCTTGCCATCAAATTTGGAAT +
Preference number: 5 (lower is better)
Translates to: VCPGSSAEGGRHRSS*LLLYLHDPCHQIWN
Trigger: ATTCCAAATTTGATGGCAAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCCAGGACAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000427078.5
ENST00000448439.1
CDS CCA 90 bp GTCTGTCCTGGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTaGTTGCTGTTGTACCTACATGACCCTTTTCTGAGTTTGCAACAT +
Preference number: 5 (lower is better)
Translates to: VCPGSSAEGGRHRSS*LLLYLHDPFLSLQH
Trigger: ATGTTGCAAACTCAGAAAAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCCAGGACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468896.1
CDS-3UTR CAA 90 bp AGGAGAGGGGAACAGAGGGCAGAGAACGTTCTGTGGAGCACTTGTGTTTGGACTCAGTTTTCTTTGTTTTaGAGCAAAGTAGTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: RRGEQRAENVLWSTCVWTQFSLF*SKVVSP
Trigger: CGGGCTGACTACTTTGCTCAAAAACAAAGAAAACTG...AGTCCAAACACAAGTGCTCCACAGAACGTTCTCTGCCCTCTGTTCCCCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS-3UTR CAA 90 bp GGCCTTGGACACACCACTAGGTCTCTGTTCCTAACTTTTAGTAAGACACTACCCTCTTCTTGGTTGCTGTaGTACCTACATGACCCTTGC +
Preference number: 5 (lower is better)
Translates to: GLGHTTRSLFLTFSKTLPSSWLL*YLHDPC
Trigger: GCAAGGGTCATGTAGGTACAACAGCAACCAAGAAGA...GGGTAGTGTCTTACTAAAAGTTAGGAACAGAGACCTAGTGGTGTGTCCAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGATGGACTCTAGGGCACTaGGCCCTGGCAGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGWTLGH*ALAGRL
Trigger: GAGCCTGCCTGCCAGGGCCAAGTGCCCTAGAGTCCA...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAACCCAAAATGCCAAAACTGGTaGATGGGGATCCAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: EFPVMAKVSDIQSSTQNPKCQNW*MGIQGA
Trigger: AGCACCCTGGATCCCCATCAACCAGTTTTGGCATTT...TGGGTTTTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS TCA 90 bp TTTCTCTTCAGCAAGGTCACAGGCACAGAGCAGGTCGGAATCGATTaGGATGGGTTTCTGCTTAATCCAAAACTTAGTGCTGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: FLFSKVTGTEQVGID*DGFLLNPKLSAGFL
Trigger: CAGAAAGCCAGCACTAAGTTTTGGATTAAGCAGAAACCCATCTCAATCGATTCCGACCTGCTCTGTGCCTGTGACCTTGCTGAAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000420643.5
ENST00000483937.5
ENST00000496063.1
ENST00000497932.5
CDS-3UTR CAA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTCACTGTCTCCAGGCATaGAAGGAGGATGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPHCLQA*KEDESS
Trigger: AGAAGATTCATCCTCCTTCAATGCCTGGAGACAGTG...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CAA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAACACTGTCTCCAGGCATaGAAGGAGGATGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQHCLQA*KEDESS
Trigger: AGAAGATTCATCCTCCTTCAATGCCTGGAGACAGTG...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CAA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTTCTTCTTGGTTGCTGTaGTACCTACATGACCCTTGC +
Preference number: 5 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPSSWLL*YLHDPC
Trigger: GCAAGGGTCATGTAGGTACAACAGCAACCAAGAAGA...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAATCTTCTTGGTTGCTGTaGTACCTACATGACCCTTGC +
Preference number: 5 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQSSWLL*YLHDPC
Trigger: GCAAGGGTCATGTAGGTACAACAGCAACCAAGAAGA...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CAA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATACCCTGGCGCTGGCCATaGTCACCACGGTCATTGGCA +
Preference number: 5 (lower is better)
Translates to: AFPICLFNMGTDFKESNIPWRWP*SPRSLA
Trigger: TGCCAATGACCGTGGTGACAATGGCCAGCGCCAGGG...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp AATTTCATTGACGGTAGCAGCGTCCGATTCAAAGTAGAGGTGTTTATAGTCGTGAAACCCCGTCTGCCCTaGAACCTGAAACTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: NFIDGSSVRFKVEVFIVVKPRLP*NLKLSG
Trigger: CCCAGAAAGTTTCAGGTTCAAGGGCAGACGGGGTTT...CACGACTATAAACACCTCTACTTTGAATCGGACGCTGCTACCGTCAATGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS CCA 90 bp GGGAGAATCCATGAGCAGCATTTATTCGAACAAAGAGTGACTCTTTaGATGTCAGACCAGGAGATGAGTACTTTTCAACCAGGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GRIHEQHLFEQRVTL*MSDQEMSTFQPGPK
Trigger: CTTTGGCCCTGGTTGAAAAGTACTCATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTGTTCGAATAAATGCTGCTCATGGATTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000420643.5
ENST00000427078.5
ENST00000473837.5
ENST00000497932.5
CDS-3UTR CAA 90 bp AAATGCCAAAACTGGTTGATGGGGATCCAGGGTGCTAAATCACACTGCAGAGGACCCTTGCCATCAAATTaGGAATACTCGTTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: KCQNWLMGIQGAKSHCRGPLPSN*EYSLKG
Trigger: CCCTTTTAACGAGTATTCCAAATTTGATGGCAAGGG...TCCTCTGCAGTGTGATTTAGCACCCTGGATCCCCATCAACCAGTTTTGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CAA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTCATCGATCTTCTTGGTaGCTGTTGTACCTACATGAC +
Preference number: 5 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPHRSSW*LLYLHD
Trigger: GTCATGTAGGTACAACAGCAACCAAGAAGATCGATG...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAACATCGATCTTCTTGGTaGCTGTTGTACCTACATGAC +
Preference number: 5 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQHRSSW*LLYLHD
Trigger: GTCATGTAGGTACAACAGCAACCAAGAAGATCGATG...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CAA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAACAAAGAGTGACTCTTaGGATGTCAGACCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQTKSDS*DVRPGD
Trigger: ATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTGT...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CAA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTCAGCTTTCCGCCTGCTaGAAAAAGGAGGCAGGCGCT +
Preference number: 5 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFQLSAC*KKEAGA
Trigger: AGCGCCTGCCTCCTTTTTCAAGCAGGCGGAAAGCTG...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS TCA 90 bp TCACACATTCCCGTGTCATCACTGGTCACATGTGACTGTCGAATATaGGCTAGAATGATAGTTGGATTGTCCAAGAAGGCCATCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SHIPVSSLVTCDCRI*ARMIVGLSKKAILS
Trigger: AGAAAGGATGGCCTTCTTGGACAATCCAACTATCATTCTAGCTCATATTCGACAGTCACATGTGACCAGTGATGACACGGGAATGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373496.3
ENST00000373498.5
ENST00000373511.6
ENST00000394060.7
ENST00000433483.1
CDS TCA 90 bp GCATTGAAGGAGGATGAATCTTCTCTAGGTCAACATCATGATCAATaGGAACCATCTCACACATTCCCGTGTCATCACTGGTCACATGTG +
Preference number: 5 (lower is better)
Translates to: ALKEDESSLGQHHDQ*EPSHTFPCHHWSHV
Trigger: CACATGTGACCAGTGATGACACGGGAATGTGTGAGATGGTTCTCATTGATCATGATGTTGACCTAGAGAAGATTCATCCTCCTTCAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373496.3
ENST00000373498.5
ENST00000373511.6
ENST00000394060.7
ENST00000433483.1
CDS GCA 90 bp CAATCATTTCACTTTGGGATATACTTTGGCACGAAGACTGCAGTCTaGCTTGGAAAACAGTCACTTCAAATCTGCCTAGGGAAACCAGAC +
Preference number: 5 (lower is better)
Translates to: QSFHFGIYFGTKTAV*LGKQSLQICLGKPD
Trigger: GTCTGGTTTCCCTAGGCAGATTTGAAGTGACTGTTTTCCAAGGCAGACTGCAGTCTTCGTGCCAAAGTATATCCCAAAGTGAAATGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS-3UTR CAA 90 bp ATCCTCCGCCCCAAAGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTTTTCTCCTCTTCATATaGTTTCACGAGCTCACCTAC +
Preference number: 5 (lower is better)
Translates to: ILRPKEWSIIPTMIKSTPFLLFI*FHELTY
Trigger: GTAGGTGAGCTCGTGAAACAATATGAAGAGGAGAAA...AGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCTTTGGGGCGGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CAA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAATTTCTCCTCTTCATATaGTTTCACGAGCTCACCTAC +
Preference number: 5 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQFLLFI*FHELTY
Trigger: GTAGGTGAGCTCGTGAAACAATATGAAGAGGAGAAA...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CAA 90 bp GTGACAGAATTTCCCGTGATGGCAAAGGTTTCTGACATCCAGTCCAGTACTCAAAGAATGATAGTTGGATaGTCCAAGAAGGCCATCCTT +
Preference number: 5 (lower is better)
Translates to: VTEFPVMAKVSDIQSSTQRMIVG*SKKAIL
Trigger: AAGGATGGCCTTCTTGGACAATCCAACTATCATTCT...TTGAGTACTGGACTGGATGTCAGAAACCTTTGCCATCACGGGAAATTCTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS-3UTR CAA 90 bp GAACTGCCAGCTGAAACCTACACTTGCTACTTAAGAAACGGAAAGACCATGTCTCATCGATCTTCTTGGTaGCTGTTGTACCTACATGAC +
Preference number: 5 (lower is better)
Translates to: ELPAETYTCYLRNGKTMSHRSSW*LLYLHD
Trigger: GTCATGTAGGTACAACAGCAACCAAGAAGATCGATG...AGACATGGTCTTTCCGTTTCTTAAGTAGCAAGTGTAGGTTTCAGCTGGCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp CGTTCTGTGGAGCACTTGTGTTTGGACTTGAACAATGACACAGCTGCAAAGTTATCTTCTTGGTTGCTGTaGTACCTACATGACCCTGAT +
Preference number: 5 (lower is better)
Translates to: RSVEHLCLDLNNDTAAKLSSWLL*YLHDPD
Trigger: ATCAGGGTCATGTAGGTACAACAGCAACCAAGAAGA...TAACTTTGCAGCTGTGTCATTGTTCAAGTCCAAACACAAGTGCTCCACAGAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS CCA 90 bp GAAGTAATAGAGTCAGTACTCACATTCGAACAAAGAGTGACTCTTTaGATGTCAGACCAGGAGATGAGTACTTTTCAACCAGGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: EVIESVLTFEQRVTL*MSDQEMSTFQPGPK
Trigger: CTTTGGCCCTGGTTGAAAAGTACTCATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTGTTCGAATGTGAGTACTGACTCTATTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437973.2
CDS TCA 90 bp ATTGAGATGGGTTTCTGCTTAATCCAAAACTTAGTGCTGGCTTTCTaGTTCGTAACAGGGTCTATCTCTACTTTGTCTCCAGAGATACCC +
Preference number: 5 (lower is better)
Translates to: IEMGFCLIQNLVLAF*FVTGSISTLSPEIP
Trigger: GGGTATCTCTGGAGACAAAGTAGAGATAGACCCTGTTACGAATCAGAAAGCCAGCACTAAGTTTTGGATTAAGCAGAAACCCATCTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483937.5
ENST00000496063.1
CDS-3UTR CAA 90 bp ATGAAAGAAGAATTCATCAGCATGACCCCTTGTGCAAAGAAATACACTCAGCTTCACTGTCTCCAGGCATaGAAGGAGGATGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: MKEEFISMTPCAKKYTQLHCLQA*KEDESS
Trigger: AGAAGATTCATCCTCCTTCAATGCCTGGAGACAGTG...AAGCTGAGTGTATTTCTTTGCACAAGGGGTCATGCTGATGAATTCTTCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS TCA 90 bp ATTGAGATGGGTTTCTGCTTAATCCAAAACTTAGTGCTGGCTTTCTaGTTCGTAACAGGGTCTATCTCTACTTTGTCTCCAGAGATACCT +
Preference number: 5 (lower is better)
Translates to: IEMGFCLIQNLVLAF*FVTGSISTLSPEIP
Trigger: AGGTATCTCTGGAGACAAAGTAGAGATAGACCCTGTTACGAATCAGAAAGCCAGCACTAAGTTTTGGATTAAGCAGAAACCCATCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000420643.5
ENST00000497932.5
CDS TCA 90 bp ATTGAGATGGGTTTCTGCTTAATCCAAAACTTAGTGCTGGCTTTCTaGTTCGTAACAGGGTCTATCTCTACTTTGTCTCCAGAGATACTG +
Preference number: 5 (lower is better)
Translates to: IEMGFCLIQNLVLAF*FVTGSISTLSPEIL
Trigger: CAGTATCTCTGGAGACAAAGTAGAGATAGACCCTGTTACGAATCAGAAAGCCAGCACTAAGTTTTGGATTAAGCAGAAACCCATCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373511.6
CDS GCA 90 bp ACAAAATCAATCATTTCACTTTGGGATATACTTTGGCACGAAGACTaGAGTCTGCCTTGGAAAACAGTCACTTCAAATCTGCCTAGGGAA +
Preference number: 5 (lower is better)
Translates to: TKSIISLWDILWHED*SLPWKTVTSNLPRE
Trigger: TTCCCTAGGCAGATTTGAAGTGACTGTTTTCCAAGGCAGACTGCAGTCTTCGTGCCAAAGTATATCCCAAAGTGAAATGATTGATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS-3UTR CAA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTTTGAGCACAATTTCATaGACGGTAGCAGCGTCCGAT +
Preference number: 5 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFLSTIS*TVAASD
Trigger: ATCGGACGCTGCTACCGTCAATGAAATTGTGCTCAA...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTGGGTCTATCTCTACTTaGTCTCCAGAGATACTGTTC +
Preference number: 5 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFGSIST*SPEILF
Trigger: GAACAGTATCTCTGGAGACAAAGTAGAGATAGACCC...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373511.6
CDS-3UTR CAA 90 bp AGAAATCGAACCATAGCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTCCCTTGCCATCAAATTaGGAATACTCGTTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: RNRTIAFPICLFNMGTDFPLPSN*EYSLKG
Trigger: CCCTTTTAACGAGTATTCCAAATTTGATGGCAAGGG...AAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGCTATGGTTCGATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATATTTCTCCTCTTCATATaGTTTCACGAGCTCACCTAC +
Preference number: 5 (lower is better)
Translates to: AFPICLFNMGTDFKESNIFLLFI*FHELTY
Trigger: GTAGGTGAGCTCGTGAAACAATATGAAGAGGAGAAA...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373511.6
CDS-3UTR CAA 90 bp AGAATGGTCCATCATACCAACCATGATAAAGAGTACACCTGTTTATTAAAAGGACCCTTGCCATCAAATTaGGAATACTCGTTAAAAGGG +
Preference number: 5 (lower is better)
Translates to: RMVHHTNHDKEYTCLLKGPLPSN*EYSLKG
Trigger: CCCTTTTAACGAGTATTCCAAATTTGATGGCAAGGG...TCCTTTTAATAAACAGGTGTACTCTTTATCATGGTTGGTATGATGGACCATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
CDS-3UTR CAA 90 bp GCTTTTCCAATCTGCCTGTTCAATATGGGAACAGATTTTAAAGAGAGTAACATATGTGGCTATGTCAATTaGCGAATCCTCCTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: AFPICLFNMGTDFKESNICGYVN*RILLKN
Trigger: GTTTTTGAGGAGGATTCGCAAATTGACATAGCCACA...TATGTTACTCTCTTTAAAATCTGTTCCCATATTGAACAGGCAGATTGGAAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
CDS GCA 72 bp GCAGCGCAGGCAGCACCGCAGCACCCTATCTGCTCCTaGCGCCATGTGTCAGCACTCGGCCTGAGGCAGTCC +
Preference number: 6 (lower is better)
Translates to: AAQAAPQHPICS*RHVSALGLRQS
Trigger: GGACTGCCTCAGGCCGAGTGCTGACACATGGCGGCAGGAGCAGATAGGGTGCTGCGGTGCTGCCTGCGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483937.5
ENST00000496063.1
CDS GCA 72 bp CTTAAGGCAGCGCAGGCAGCACCGCAGCACCCTATCTaGTCCTGCCGCCATGTGTCAGCACTCGGCCTGAGG +
Preference number: 6 (lower is better)
Translates to: LKAAQAAPQHPI*SCRHVSALGLR
Trigger: CCTCAGGCCGAGTGCTGACACATGGCGGCAGGAGCAGATAGGGTGCTGCGGTGCTGCCTGCGCTGCCTTAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483937.5
ENST00000496063.1
CDS TCA 72 bp TCGGCTCCCGTCCTTCGCTTGTATACTGCCAGCAGATaGGCCCGATCAGGTCCTGCACCCTGGCGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: SAPVLRLYTASR*ARSGPAPWRWP
Trigger: TGGCCAGCGCCAGGGTGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGGACGGGAGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000420643.5
ENST00000427078.5
ENST00000448439.1
ENST00000468896.1
ENST00000473837.5
ENST00000497932.5
CDS CCA 72 bp CTGCACCCTGGCGCTGGCCATTGTCACCACGGTCATTaGCAGCAGTCTGTCCTGGCTCGAGTGCAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: LHPGAGHCHHGH*QQSVLARVQRE
Trigger: CTCCCTCTGCACTCGAGCCAGGACAGACTGCTGCCAATGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000420643.5
ENST00000427078.5
ENST00000448439.1
ENST00000468896.1
ENST00000473837.5
ENST00000497932.5
CDS CAA 72 bp CCTGCACCCTGGCGCTGGCCATTGTCACCACGGTCATaGGCAGCAGTCTGTCCTGGCTCGAGTGCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: PAPWRWPLSPRS*AAVCPGSSAEG
Trigger: TCCCTCTGCACTCGAGCCAGGACAGACTGCTGCCAATGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000420643.5
ENST00000427078.5
ENST00000448439.1
ENST00000468896.1
ENST00000473837.5
ENST00000497932.5
CDS CAA 72 bp GAGGCACGGTGGACAGCCACAGCAGACAGCCCCCTCTaGCTCTCTGCAAGGAGTGATGAGCGGAACCTGGGG +
Preference number: 6 (lower is better)
Translates to: EARWTATADSPL*LSARSDERNLG
Trigger: CCCCAGGTTCCGCTCATCACTCCTTGCAGAGAGCAAGAGGGGGCTGTCTGCTGTGGCTGTCCACCGTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS CCA 72 bp GGCTCTCCAAAGTGCTGTCCAGGTCAACGGCGACATTaGGCTCGCTCTGCTTCTCCAGGCGGTACTGAGGGC +
Preference number: 6 (lower is better)
Translates to: GSPKCCPGQRRH*ARSASPGGTEG
Trigger: GCCCTCAGTACCGCCTGGAGAAGCAGAGCGAGCCCAATGTCGCCGTTGACCTGGACAGCACTTTGGAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000473837.5
CDS CAA 90 bp CGATCAGGTCCTGCACCCTGGCGCTGGCCATTGTCACCACGGTCATaGGCAGCAGTCTGTCCTGGCTCGAGTGCAGAGGGAGGTAGACAT +
Preference number: 6 (lower is better)
Translates to: RSGPAPWRWPLSPRS*AAVCPGSSAEGGRH
Trigger: ATGTCTACCTCCCTCTGCACTCGAGCCAGGACAGACTGCTGCCAATGACCGTGGTGACAATGGCCAGCGCCAGGGTGCAGGACCTGATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000420643.5
ENST00000427078.5
ENST00000448439.1
ENST00000468896.1
ENST00000473837.5
ENST00000497932.5
CDS GCA 72 bp CCAGGCAGAACTCCCATGCGCTCTGGCTCTCCAAAGTaGTGTCCAGGTCAACGGCGACATTGGGCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: PGRTPMRSGSPK*CPGQRRHWARS
Trigger: AGAGCGAGCCCAATGTCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000473837.5
CDS CCA 72 bp CTGTTCTCGCGGACCAGGCAGAACTCCCATGCGCTCTaGCTCTCCAAAGTGCTGTCCAGGTCAACGGCGACA +
Preference number: 6 (lower is better)
Translates to: LFSRTRQNSHAL*LSKVLSRSTAT
Trigger: TGTCGCCGTTGACCTGGACAGCACTTTGGAGAGCCAGAGCGCATGGGAGTTCTGCCTGGTCCGCGAGAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265960.8
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000473837.5
CDS GCA 72 bp CTCTTGAGCTTCGGCTCCCGTCCTTCGCTTGTATACTaGCAGCAGATGAGCCCGATCAGGTCCTGCACCCTG +
Preference number: 6 (lower is better)
Translates to: LLSFGSRPSLVY*QQMSPIRSCTL
Trigger: CAGGGTGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGGACGGGAGCCGAAGCTCAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448439.1
CDS GCA 72 bp CTCCCTGTGAGCAGAGCACCAGGAGAAGAGGGCTGCTaGACACACGGTCCCTGTAGCTCAGACTCCTTAAGG +
Preference number: 6 (lower is better)
Translates to: LPVSRAPGEEGC*THGPCSSDSLR
Trigger: CCTTAAGGAGTCTGAGCTACAGGGACCGTGTGTGCAGCAGCCCTCTTCTCCTGGTGCTCTGCTCACAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS CCA 72 bp CACAGCTGCAAAGTTAATCACTGGGCCGAGGCACGGTaGACAGCCACAGCAGACAGCCCCCTCTTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: HSCKVNHWAEAR*TATADSPLLLS
Trigger: AGAGAGCAAGAGGGGGCTGTCTGCTGTGGCTGTCCACCGTGCCTCGGCCCAGTGATTAACTTTGCAGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS CAA 90 bp CCCACTTGTCACTGCCACTTCTCTATGCTAAGGGGAGTGAGTGGGTaGTGGGCAGAAGCAGCACTGTCTCCCTGTGAGCAGAGCACCAGG +
Preference number: 6 (lower is better)
Translates to: PTCHCHFSMLRGVSG*WAEAALSPCEQSTR
Trigger: CCTGGTGCTCTGCTCACAGGGAGACAGTGCTGCTTCTGCCCACAACCCACTCACTCCCCTTAGCATAGAGAAGTGGCAGTGACAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS CAA 90 bp GAGGCCCAGAATCCAGCCTGGAGGCAAACAGAGGCCTCTCTGTCCTaGGCTTCGGAGCCCTCGGTAGTCTTCTTGGTTACAAGGAGGAGT +
Preference number: 6 (lower is better)
Translates to: EAQNPAWRQTEASLS*ASEPSVVFLVTRRS
Trigger: ACTCCTCCTTGTAACCAAGAAGACTACCGAGGGCTCCGAAGCCAAGGACAGAGAGGCCTCTGTTTGCCTCCAGGCTGGATTCTGGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS GCA 72 bp TCATTGAGCTTCGGCTCCCGTCCTTCGCTTGTATACTaGCAGCAGATGAGCCCGATCAGGTCCTGCACCCTG +
Preference number: 6 (lower is better)
Translates to: SLSFGSRPSLVY*QQMSPIRSCTL
Trigger: CAGGGTGCAGGACCTGATCGGGCTCATCTGCTGGCAGTATACAAGCGAAGGACGGGAGCCGAAGCTCAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000420643.5
ENST00000427078.5
ENST00000437973.2
ENST00000468896.1
ENST00000473837.5
ENST00000497932.5
CDS CCA 72 bp TCACAGGCTCCCAGTGCACCAGTGTTTCCAGAGGCCTaGCTCTGGACATGCCGTTCAGAGATCTGCTTCACA +
Preference number: 6 (lower is better)
Translates to: SQAPSAPVFPEA*LWTCRSEICFT
Trigger: TGTGAAGCAGATCTCTGAACGGCATGTCCAGAGCCAGGCCTCTGGAAACACTGGTGCACTGGGAGCCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437973.2
CDS CCA 72 bp TGCCACTTCTCTATGCTAAGGGGAGTGAGTGGGTTGTaGGCAGAAGCAGCACTGTCTCCCTGTGAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: CHFSMLRGVSGL*AEAALSPCEQS
Trigger: GCTCTGCTCACAGGGAGACAGTGCTGCTTCTGCCCACAACCCACTCACTCCCCTTAGCATAGAGAAGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS CAA 90 bp TGTCCTGGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTaGCTGTTGTACCTACATGACCCCGGTCTTCCCCCAGAGCTTCAC +
Preference number: 6 (lower is better)
Translates to: CPGSSAEGGRHRSSW*LLYLHDPGLPPELH
Trigger: GTGAAGCTCTGGGGGAAGACCGGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCCAGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS CAA 90 bp ACAGAGGCCTCTCTGTCCTTGGCTTCGGAGCCCTCGGTAGTCTTCTaGGTTACAAGGAGGAGTTGGCTTGGTGGAGGAGAGATCAGTGAG +
Preference number: 6 (lower is better)
Translates to: TEASLSLASEPSVVF*VTRRSWLGGGEISE
Trigger: CTCACTGATCTCTCCTCCACCAAGCCAACTCCTCCTTGTAACCAAGAAGACTACCGAGGGCTCCGAAGCCAAGGACAGAGAGGCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS GCA 72 bp CGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTTaGTGTTGTACCTACATGACCCCGGTCTTCCCCCAG +
Preference number: 6 (lower is better)
Translates to: RVQREVDIDLLG*CCTYMTPVFPQ
Trigger: CTGGGGGAAGACCGGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS CCA 72 bp GGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTaGTTGCTGTTGTACCTACATGACCCCGGTCTTCCC +
Preference number: 6 (lower is better)
Translates to: GSSAEGGRHRSS*LLLYLHDPGLP
Trigger: GGGAAGACCGGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS CAA 72 bp GTGGAAGCCAGGCTAGTGGGGTTGCAAGTGCGGAGGTaGAGTAGTACCCCACTTGTCACTGCCACTTCTCTA +
Preference number: 6 (lower is better)
Translates to: VEARLVGLQVRR*SSTPLVTATSL
Trigger: TAGAGAAGTGGCAGTGACAAGTGGGGTACTACTCAACCTCCGCACTTGCAACCCCACTAGCCTGGCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS CAA 72 bp TCTCTGTCCTTGGCTTCGGAGCCCTCGGTAGTCTTCTaGGTTACAAGGAGGAGTTGGCTTGGTGGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: SLSLASEPSVVF*VTRRSWLGGGE
Trigger: CTCTCCTCCACCAAGCCAACTCCTCCTTGTAACCAAGAAGACTACCGAGGGCTCCGAAGCCAAGGACAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS CAA 72 bp AATCCAGCCTGGAGGCAAACAGAGGCCTCTCTGTCCTaGGCTTCGGAGCCCTCGGTAGTCTTCTTGGTTACA +
Preference number: 6 (lower is better)
Translates to: NPAWRQTEASLS*ASEPSVVFLVT
Trigger: TGTAACCAAGAAGACTACCGAGGGCTCCGAAGCCAAGGACAGAGAGGCCTCTGTTTGCCTCCAGGCTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS CAA 90 bp GGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTTGCTGTaGTACCTACATGACCCTCAGGTGACGTGGCTGCTTGAACTCCTG +
Preference number: 6 (lower is better)
Translates to: GSSAEGGRHRSSWLL*YLHDPQVTWLLELL
Trigger: CAGGAGTTCAAGCAGCCACGTCACCTGAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420643.5
CDS GCA 72 bp GTGAGCGTTTCCAAACACATGACTTCTAAGCAAGTTTaGAACGGACAAAGCGGGCATGGAGCGAGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: VSVSKHMTSKQV*NGQSGHGARRP
Trigger: TGGCCGCCTCGCTCCATGCCCGCTTTGTCCGTTGCAAACTTGCTTAGAAGTCATGTGTTTGGAAACGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS CCA 72 bp GAGCCCTCGGTAGTCTTCTTGGTTACAAGGAGGAGTTaGCTTGGTGGAGGAGAGATCAGTGAGGAAGCAGGT +
Preference number: 6 (lower is better)
Translates to: EPSVVFLVTRRS*LGGGEISEEAG
Trigger: ACCTGCTTCCTCACTGATCTCTCCTCCACCAAGCCAACTCCTCCTTGTAACCAAGAAGACTACCGAGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483937.5
CDS CAA 72 bp GCAGAGGGAGGTAGACATCGATCTTCTTGGTTGCTGTaGTACCTACATGACCCCGGTCTTCCCCCAGAGCTT +
Preference number: 6 (lower is better)
Translates to: AEGGRHRSSWLL*YLHDPGLPPEL
Trigger: AAGCTCTGGGGGAAGACCGGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS CAA 72 bp TCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTaGCTGTTGTACCTACATGACCCCGGTCTTCCCCCA +
Preference number: 6 (lower is better)
Translates to: SSAEGGRHRSSW*LLYLHDPGLPP
Trigger: TGGGGGAAGACCGGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS CAA 72 bp GCAGAGGGAGGTAGACATCGATCTTCTTGGTTGCTGTaGTACCTACATGACCCTCAGGTGACGTGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: AEGGRHRSSWLL*YLHDPQVTWLL
Trigger: AAGCAGCCACGTCACCTGAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420643.5
CDS CAA 90 bp CAGTTAGTGTGTATTCCTCGCAGAGAAGGTGCAAACCTAGAAGTTTaGCTTCACAGGCTCCCAGTGCACCAGTGTTTCCAGAGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: QLVCIPRREGANLEV*LHRLPVHQCFQRPG
Trigger: GCCAGGCCTCTGGAAACACTGGTGCACTGGGAGCCTGTGAAGCAAAACTTCTAGGTTTGCACCTTCTCTGCGAGGAATACACACTAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437973.2
CDS CAA 90 bp GAGAGGGGAACAGAGGGCAGAGAACGTTCTGTGGAGCACTTGTGTTaGGACTTGAACAATGACACAGCTGCAAAGTTAATCACTGGGCCG +
Preference number: 6 (lower is better)
Translates to: ERGTEGRERSVEHLC*DLNNDTAAKLITGP
Trigger: CGGCCCAGTGATTAACTTTGCAGCTGTGTCATTGTTCAAGTCCAAACACAAGTGCTCCACAGAACGTTCTCTGCCCTCTGTTCCCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS TCA 72 bp CTGCAAAGCAGTCTGCGTAGCCTAGGTGCAGAGGCATaGAATACAATGCGAATGTCGTCCTCAGCATCTCTC +
Preference number: 6 (lower is better)
Translates to: LQSSLRSLGAEA*NTMRMSSSASL
Trigger: GAGAGATGCTGAGGACGACATTCGCATTGTATTTCATGCCTCTGCACCTAGGCTACGCAGACTGCTTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437973.2
CDS CCA 72 bp GGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTaGTTGCTGTTGTACCTACATGACCCTTGCCATCAA +
Preference number: 6 (lower is better)
Translates to: GSSAEGGRHRSS*LLLYLHDPCHQ
Trigger: TTGATGGCAAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000427078.5
ENST00000448439.1
CDS CCA 72 bp GGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTaGTTGCTGTTGTACCTACATGACCCTTTTCTGAGT +
Preference number: 6 (lower is better)
Translates to: GSSAEGGRHRSS*LLLYLHDPFLS
Trigger: ACTCAGAAAAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468896.1
CDS CCA 72 bp GGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTaGTTGCTGTTGTACCTACATGACCCTGATAGTTTC +
Preference number: 6 (lower is better)
Translates to: GSSAEGGRHRSS*LLLYLHDPDSF
Trigger: GAAACTATCAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS CAA 72 bp TGTATTCCTCGCAGAGAAGGTGCAAACCTAGAAGTTTaGCTTCACAGGCTCCCAGTGCACCAGTGTTTCCAG +
Preference number: 6 (lower is better)
Translates to: CIPRREGANLEV*LHRLPVHQCFQ
Trigger: CTGGAAACACTGGTGCACTGGGAGCCTGTGAAGCAAAACTTCTAGGTTTGCACCTTCTCTGCGAGGAATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437973.2
CDS CAA 90 bp TGTCCTGGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTaGCTGTTGTACCTACATGACCCTGATAGTTTCCAAAGTAGGAGA +
Preference number: 6 (lower is better)
Translates to: CPGSSAEGGRHRSSW*LLYLHDPDSFQSRR
Trigger: TCTCCTACTTTGGAAACTATCAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCCAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS CAA 90 bp TGTCCTGGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTaGCTGTTGTACCTACATGACCCTTGCCATCAAATTTGGAATACT +
Preference number: 6 (lower is better)
Translates to: CPGSSAEGGRHRSSW*LLYLHDPCHQIWNT
Trigger: AGTATTCCAAATTTGATGGCAAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCCAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000427078.5
ENST00000448439.1
CDS CAA 90 bp TGTCCTGGCTCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTaGCTGTTGTACCTACATGACCCTTTTCTGAGTTTGCAACATTTC +
Preference number: 6 (lower is better)
Translates to: CPGSSAEGGRHRSSW*LLYLHDPFLSLQHF
Trigger: GAAATGTTGCAAACTCAGAAAAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGAGCCAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468896.1
CDS TCA 72 bp CCCGTGTCATCACTGGTCACATGTGACTGTCGAATATaGGCTAGAATGATAGTTGGATTGTCCAAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: PVSSLVTCDCRI*ARMIVGLSKKA
Trigger: GGCCTTCTTGGACAATCCAACTATCATTCTAGCTCATATTCGACAGTCACATGTGACCAGTGATGACACGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373496.3
ENST00000373498.5
ENST00000373511.6
ENST00000394060.7
ENST00000433483.1
CDS TCA 72 bp AGCAAGGTCACAGGCACAGAGCAGGTCGGAATCGATTaGGATGGGTTTCTGCTTAATCCAAAACTTAGTGCT +
Preference number: 6 (lower is better)
Translates to: SKVTGTEQVGID*DGFLLNPKLSA
Trigger: AGCACTAAGTTTTGGATTAAGCAGAAACCCATCTCAATCGATTCCGACCTGCTCTGTGCCTGTGACCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000420643.5
ENST00000483937.5
ENST00000496063.1
ENST00000497932.5
CDS GCA 72 bp CGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTTaGTGTTGTACCTACATGACCCTTGCCATCAAATTT +
Preference number: 6 (lower is better)
Translates to: RVQREVDIDLLG*CCTYMTLAIKF
Trigger: AAATTTGATGGCAAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000427078.5
ENST00000448439.1
CDS GCA 72 bp CTGCTAAGCATATCCTGTACTGTGGCTATGTCAATTTaGGAATCCTCCTCAAAAACCCCGTCTGCCCTTGAA +
Preference number: 6 (lower is better)
Translates to: LLSISCTVAMSI*ESSSKTPSALE
Trigger: TTCAAGGGCAGACGGGGTTTTTGAGGAGGATTCGCAAATTGACATAGCCACAGTACAGGATATGCTTAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000394063.5
ENST00000420643.5
ENST00000496063.1
ENST00000497932.5
CDS GCA 72 bp CGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTTaGTGTTGTACCTACATGACCCTGATAGTTTCCAAA +
Preference number: 6 (lower is better)
Translates to: RVQREVDIDLLG*CCTYMTLIVSK
Trigger: TTTGGAAACTATCAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS CAA 72 bp TCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTaGCTGTTGTACCTACATGACCCTTGCCATCAAATT +
Preference number: 6 (lower is better)
Translates to: SSAEGGRHRSSW*LLYLHDPCHQI
Trigger: AATTTGATGGCAAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000427078.5
ENST00000448439.1
CDS CAA 72 bp TCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTaGCTGTTGTACCTACATGACCCTTTTCTGAGTTTG +
Preference number: 6 (lower is better)
Translates to: SSAEGGRHRSSW*LLYLHDPFLSL
Trigger: CAAACTCAGAAAAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468896.1
CDS CAA 72 bp GCAGAGGGAGGTAGACATCGATCTTCTTGGTTGCTGTaGTACCTACATGACCCTGATAGTTTCCAAAGTAGG +
Preference number: 6 (lower is better)
Translates to: AEGGRHRSSWLL*YLHDPDSFQSR
Trigger: CCTACTTTGGAAACTATCAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS CAA 72 bp TCGAGTGCAGAGGGAGGTAGACATCGATCTTCTTGGTaGCTGTTGTACCTACATGACCCTGATAGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: SSAEGGRHRSSW*LLYLHDPDSFQ
Trigger: TTGGAAACTATCAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGCACTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS CAA 72 bp GCAGAGGGAGGTAGACATCGATCTTCTTGGTTGCTGTaGTACCTACATGACCCTTGCCATCAAATTTGGAAT +
Preference number: 6 (lower is better)
Translates to: AEGGRHRSSWLL*YLHDPCHQIWN
Trigger: ATTCCAAATTTGATGGCAAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000427078.5
ENST00000448439.1
CDS CAA 72 bp GCAGAGGGAGGTAGACATCGATCTTCTTGGTTGCTGTaGTACCTACATGACCCTTTTCTGAGTTTGCAACAT +
Preference number: 6 (lower is better)
Translates to: AEGGRHRSSWLL*YLHDPFLSLQH
Trigger: ATGTTGCAAACTCAGAAAAGGGTCATGTAGGTACAACAGCAACCAAGAAGATCGATGTCTACCTCCCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468896.1
CDS CAA 72 bp ACAGAGGGCAGAGAACGTTCTGTGGAGCACTTGTGTTaGGACTTGAACAATGACACAGCTGCAAAGTTAATC +
Preference number: 6 (lower is better)
Translates to: TEGRERSVEHLC*DLNNDTAAKLI
Trigger: GATTAACTTTGCAGCTGTGTCATTGTTCAAGTCCAAACACAAGTGCTCCACAGAACGTTCTCTGCCCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497932.5
CDS TCA 72 bp GAGGATGAATCTTCTCTAGGTCAACATCATGATCAATaGGAACCATCTCACACATTCCCGTGTCATCACTGG +
Preference number: 6 (lower is better)
Translates to: EDESSLGQHHDQ*EPSHTFPCHHW
Trigger: CCAGTGATGACACGGGAATGTGTGAGATGGTTCTCATTGATCATGATGTTGACCTAGAGAAGATTCATCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373496.3
ENST00000373498.5
ENST00000373511.6
ENST00000394060.7
ENST00000433483.1
CDS TCA 72 bp CAGGAGATGAGTACTTTTCAACCAGGGCCAAAGTACTaGAGCCAAACTTATGAATGGGCTCATTGGAATCCA +
Preference number: 6 (lower is better)
Translates to: QEMSTFQPGPKY*SQTYEWAHWNP
Trigger: TGGATTCCAATGAGCCCATTCATAAGTTTGGCTTCAGTACTTTGGCCCTGGTTGAAAAGTACTCATCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000420643.5
ENST00000427078.5
ENST00000437973.2
ENST00000473837.5
ENST00000497932.5
CDS CAA 72 bp AGAGTCAGTACTCACATTCGAACAAAGAGTGACTCTTaGGATGTCAGACCAGGAGATGAGTACTTTTCAACC +
Preference number: 6 (lower is better)
Translates to: RVSTHIRTKSDS*DVRPGDEYFST
Trigger: GGTTGAAAAGTACTCATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTGTTCGAATGTGAGTACTGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437973.2
CDS CAA 90 bp AGAAGTAATAGAGTCAGTACTCACATTCGAACAAAGAGTGACTCTTaGGATGTCAGACCAGGAGATGAGTACTTTTCAACCAGGGCCAAA +
Preference number: 6 (lower is better)
Translates to: RSNRVSTHIRTKSDS*DVRPGDEYFSTRAK
Trigger: TTTGGCCCTGGTTGAAAAGTACTCATCTCCTGGTCTGACATCCAAAGAGTCACTCTTTGTTCGAATGTGAGTACTGACTCTATTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437973.2
CDS TCA 72 bp GGTTTCTGCTTAATCCAAAACTTAGTGCTGGCTTTCTaGTTCGTAACAGGGTCTATCTCTACTTTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: GFCLIQNLVLAF*FVTGSISTLSP
Trigger: TGGAGACAAAGTAGAGATAGACCCTGTTACGAATCAGAAAGCCAGCACTAAGTTTTGGATTAAGCAGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394063.5
ENST00000420643.5
ENST00000483937.5
ENST00000496063.1
ENST00000497932.5
CDS TCA 72 bp CACAGCAGTTCAAACCCATTTTCCTTAACACAGCCTTaGCAGCCAGTGAAATTAGTGAATTTAGTCACAAGC +
Preference number: 6 (lower is better)
Translates to: HSSSNPFSLTQP*QPVKLVNLVTS
Trigger: GCTTGTGACTAAATTCACTAATTTCACTGGCTGTCAAGGCTGTGTTAAGGAAAATGGGTTTGAACTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394060.7
CDS GCA 72 bp ATCATTTCACTTTGGGATATACTTTGGCACGAAGACTaGAGTCTGCCTTGGAAAACAGTCACTTCAAATCTG +
Preference number: 6 (lower is better)
Translates to: IISLWDILWHED*SLPWKTVTSNL
Trigger: CAGATTTGAAGTGACTGTTTTCCAAGGCAGACTGCAGTCTTCGTGCCAAAGTATATCCCAAAGTGAAATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS CCA 72 bp AGCACAAAATCAATCATTTCACTTTGGGATATACTTTaGCACGAAGACTGCAGTCTGCCTTGGAAAACAGTC +
Preference number: 6 (lower is better)
Translates to: STKSIISLWDIL*HEDCSLPWKTV
Trigger: GACTGTTTTCCAAGGCAGACTGCAGTCTTCGTGCCAAAGTATATCCCAAAGTGAAATGATTGATTTTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473837.5
CDS CAA 72 bp CCAATTTCCTTAAAAGGCTATTTTCTCCTCTTCATATaGTTTCACGAGCTCACCTACCTGAAGCTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: PISLKGYFLLFI*FHELTYLKLLP
Trigger: TGGAAGCAGCTTCAGGTAGGTGAGCTCGTGAAACAATATGAAGAGGAGAAAATAGCCTTTTAAGGAAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373496.3
ENST00000373511.6
ENST00000394060.7
CDS GCA 72 bp TCAAATTTGGAATACTCGTTAAAAGGGTTATTCAGCTaGAGAGGGCACTGTTCTAGGCGTACAGATAATATC +
Preference number: 6 (lower is better)
Translates to: SNLEYSLKGLFS*RGHCSRRTDNI
Trigger: GATATTATCTGTACGCCTAGAACAGTGCCCTCTGCAGCTGAATAACCCTTTTAACGAGTATTCCAAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000265960.8
ENST00000350766.7
ENST00000373498.5
ENST00000373503.7
ENST00000373511.6
ENST00000394060.7
ENST00000394063.5
ENST00000427078.5
ENST00000448439.1