Pregenerated sensors for MAPK6-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000259438Ensembl transcript IDs: ENST00000561318.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCAGGGCAGGTAGTAGAGCAAACGGCCCCAGCTGTCTTCCTCCCTaGCCGCCCGCAGGCAAAGCCCCCAGGAGACGCCGGACGAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: ARAGSRANGPSCLPP*PPAGKAPRRRRTSR Trigger: GCGGCTCGTCCGGCGTCTCCTGGGGGCTTTGCCTGCGGGCGGGCAGGGAGGAAGACAGCTGGGGCCGTTTGCTCTACTACCTGCCCTGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS CCA 90 bp | CGGGCTGTCGCCTTCCAGCCAATCCATCTTAAGGTCCACCCTTCCTaGAGACTGAGGCCTCTTCCTCTCGGATTGCCCAGTGCCTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: RAVAFQPIHLKVHPS*RLRPLPLGLPSALH Trigger: GTGCAAGGCACTGGGCAATCCGAGAGGAAGAGGCCTCAGTCTCCAGGAAGGGTGGACCTTAAGATGGATTGGCTGGAAGGCGACAGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS GCA 90 bp | CCACCCTTCCTGGAGACTGAGGCCTCTTCCTCTCGGATTGCCCAGTaGCTTGCACGTAGTAGGTGCTTAGTAAACGCTGGCACTGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: PPFLETEASSSRIAQ*LARSRCLVNAGTGF Trigger: AAACCCAGTGCCAGCGTTTACTAAGCACCTACTACGTGCAAGGCACTGGGCAATCCGAGAGGAAGAGGCCTCAGTCTCCAGGAAGGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS GCA 90 bp | GAGGCCTCTTCCTCTCGGATTGCCCAGTGCCTTGCACGTAGTAGGTaGTTAGTAAACGCTGGCACTGGGTTTGGTCACTTTGTTCCCTTA | + |
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Preference number: 5 (lower is better) Translates to: EASSSRIAQCLARSR*LVNAGTGFGHFVPL Trigger: TAAGGGAACAAAGTGACCAAACCCAGTGCCAGCGTTTACTAAGCACCTACTACGTGCAAGGCACTGGGCAATCCGAGAGGAAGAGGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS TCA 90 bp | CCTTGGCGACCACTCCTGAAAGCCTTCCTCCATACTCTGGCAGAATaGATGACCTTAGTATTGGCCTCTAACGCGTCTGTCTTGTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: PWRPLLKAFLHTLAE*MTLVLASNASVLCS Trigger: CGAGCACAAGACAGACGCGTTAGAGGCCAATACTAAGGTCATTCATTCTGCCAGAGTATGGAGGAAGGCTTTCAGGAGTGGTCGCCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS GCA 72 bp | GGTAGTAGAGCAAACGGCCCCAGCTGTCTTCCTCCCTaGCCGCCCGCAGGCAAAGCCCCCAGGAGACGCCGG | + |
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Preference number: 6 (lower is better) Translates to: GSRANGPSCLPP*PPAGKAPRRRR Trigger: CCGGCGTCTCCTGGGGGCTTTGCCTGCGGGCGGGCAGGGAGGAAGACAGCTGGGGCCGTTTGCTCTACTACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS TCA 72 bp | GCCCTCCTGGTTATATCCGCTCCTCCGGGATCCAGCTaGAAGGCCACCTTGGCGACCACTCCTGAAAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: ALLVISAPPGSS*KATLATTPESL Trigger: AAGGCTTTCAGGAGTGGTCGCCAAGGTGGCCTTTCAGCTGGATCCCGGAGGAGCGGATATAACCAGGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS TCA 72 bp | AGCCAATCCATCTTAAGGTCCACCCTTCCTGGAGACTaGGGCCTCTTCCTCTCGGATTGCCCAGTGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SQSILRSTLPGD*GLFLSDCPVPC Trigger: GCAAGGCACTGGGCAATCCGAGAGGAAGAGGCCTCAGTCTCCAGGAAGGGTGGACCTTAAGATGGATTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS GCA 72 bp | CTGGAGACTGAGGCCTCTTCCTCTCGGATTGCCCAGTaGCTTGCACGTAGTAGGTGCTTAGTAAACGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LETEASSSRIAQ*LARSRCLVNAG Trigger: GCCAGCGTTTACTAAGCACCTACTACGTGCAAGGCACTGGGCAATCCGAGAGGAAGAGGCCTCAGTCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS CCA 72 bp | GAGTTCCTAAGCACAGAAGGCTGTGAAGTGCCCTCCTaGTTATATCCGCTCCTCCGGGATCCAGCTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: EFLSTEGCEVPS*LYPLLRDPAER Trigger: CCTTTCAGCTGGATCCCGGAGGAGCGGATATAACCAGGAGGGCACTTCACAGCCTTCTGTGCTTAGGAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS TCA 72 bp | GAAGTGCTGTATAGAGTTCCTAAGCACAGAAGGCTGTaGAGTGCCCTCCTGGTTATATCCGCTCCTCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: EVLYRVPKHRRL*SALLVISAPPG Trigger: TCCCGGAGGAGCGGATATAACCAGGAGGGCACTTCACAGCCTTCTGTGCTTAGGAACTCTATACAGCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS GCA 72 bp | TCCTCTCGGATTGCCCAGTGCCTTGCACGTAGTAGGTaGTTAGTAAACGCTGGCACTGGGTTTGGTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: SSRIAQCLARSR*LVNAGTGFGHF Trigger: AAAGTGACCAAACCCAGTGCCAGCGTTTACTAAGCACCTACTACGTGCAAGGCACTGGGCAATCCGAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS CAA 72 bp | ACAGTAACGAGATACTTGAGTCACCCTACGGGAACGTaGCCAGCTGAGGCCAAACAAGACAAGATTCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: TVTRYLSHPTGT*PAEAKQDKILP Trigger: AGGCAGAATCTTGTCTTGTTTGGCCTCAGCTGGCAACGTTCCCGTAGGGTGACTCAAGTATCTCGTTACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS TCA 72 bp | GAGATACTTGAGTCACCCTACGGGAACGTTGCCAGCTaGGGCCAAACAAGACAAGATTCTGCCTTCTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: EILESPYGNVAS*GQTRQDSAFLF Trigger: AAACAAGAAGGCAGAATCTTGTCTTGTTTGGCCTCAGCTGGCAACGTTCCCGTAGGGTGACTCAAGTATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS CAA 90 bp | GCCACTGTGCCGAGCCATCACATGTTTTGCTTTCCGTTGGTGATTTaGCTGTTTAAAGTGGCCCCCAAATCTATTGCTGAAGTGCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: ATVPSHHMFCFPLVI*LFKVAPKSIAEVLY Trigger: ATACAGCACTTCAGCAATAGATTTGGGGGCCACTTTAAACAGCAAAATCACCAACGGAAAGCAAAACATGTGATGGCTCGGCACAGTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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| CDS CAA 72 bp | CCGAGCCATCACATGTTTTGCTTTCCGTTGGTGATTTaGCTGTTTAAAGTGGCCCCCAAATCTATTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PSHHMFCFPLVI*LFKVAPKSIAE Trigger: TTCAGCAATAGATTTGGGGGCCACTTTAAACAGCAAAATCACCAACGGAAAGCAAAACATGTGATGGCTCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561318.1 |
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