RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAPK4 (Homo sapiens)

Ensembl gene IDs: ENSG00000141639

Ensembl transcript IDs: ENST00000400384.7, ENST00000540640.3, ENST00000586735.1, ENST00000587823.1, ENST00000588540.1, ENST00000592595.5

Found 781 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCTCGGGGTCGTCGGCGGGCGGGCTGGCGTGCTCTGGGCCGCCCTaGGTGCTCTTGACCCACTGCGCGATCTCCAGGAAGAGGCTGGCC +
Preference number: 1 (lower is better)
Translates to: RSGSSAGGLACSGPP*VLLTHCAISRKRLA
Trigger: GGCCAGCCTCTTCCTGGAGATCGCGCAGTGGGTCAAGAGCACGCAGGGCGGCCCAGAGCACGCCAGCCCGCCCGCCGACGACCCCGAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 90 bp GAGGCAGACAAGCGGCGCTCGGGGTCGTCGGCGGGCGGGCTGGCGTaGTCTGGGCCGCCCTGCGTGCTCTTGACCCACTGCGCGATCTCC +
Preference number: 1 (lower is better)
Translates to: EADKRRSGSSAGGLA*SGPPCVLLTHCAIS
Trigger: GGAGATCGCGCAGTGGGTCAAGAGCACGCAGGGCGGCCCAGAGCACGCCAGCCCGCCCGCCGACGACCCCGAGCGCCGCTTGTCTGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CCA 90 bp CAGCCAGTGGCGCCGAACCCGCGCGCGGGTCGCGCTGTACCTCGCTaGCGTCCTGGCACCGGTCAGGCCGCCACTCCAGGTCCGACGACA +
Preference number: 1 (lower is better)
Translates to: QPVAPNPRAGRAVPR*RPGTGQAATPGPTT
Trigger: TGTCGTCGGACCTGGAGTGGCGGCCTGACCGGTGCCAGGACGCCAGCGAGGTACAGCGCGACCCGCGCGCGGGTTCGGCGCCACTGGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR TCA 90 bp CGTCGGCGGGCGGGCTGGCGTGCTCTGGGCCGCCCTGCGTGCTCTTaGCCCACTGCGCGATCTCCAGGAAGAGGCTGGCCGGCTCGTCCT +
Preference number: 1 (lower is better)
Translates to: RRRAGWRALGRPACS*PTARSPGRGWPARP
Trigger: AGGACGAGCCGGCCAGCCTCTTCCTGGAGATCGCGCAGTGGGTCAAGAGCACGCAGGGCGGCCCAGAGCACGCCAGCCCGCCCGCCGACG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 90 bp AGGAAGCGCTCGGAGCTGCTGTGCGAGTCCTTGCGCGGGTCCACCTaGACGTCCTCAGCCAGTGGCGCCGAACCCGCGCGCGGGTCGCGC +
Preference number: 1 (lower is better)
Translates to: RKRSELLCESLRGST*TSSASGAEPARGSR
Trigger: GCGCGACCCGCGCGCGGGTTCGGCGCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCAGCTCCGAGCGCTTCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CCA 90 bp GCTGTGCGAGTCCTTGCGCGGGTCCACCTGCACGTCCTCAGCCAGTaGCGCCGAACCCGCGCGCGGGTCGCGCTGTACCTCGCTGGCGTC +
Preference number: 1 (lower is better)
Translates to: AVRVLARVHLHVLSQ*RRTRARVALYLAGV
Trigger: GACGCCAGCGAGGTACAGCGCGACCCGCGCGCGGGTTCGGCGCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CCA 90 bp AGACAAGCGGCGCTCGGGGTCGTCGGCGGGCGGGCTGGCGTGCTCTaGGCCGCCCTGCGTGCTCTTGACCCACTGCGCGATCTCCAGGAA +
Preference number: 1 (lower is better)
Translates to: RQAALGVVGGRAGVL*AALRALDPLRDLQE
Trigger: TTCCTGGAGATCGCGCAGTGGGTCAAGAGCACGCAGGGCGGCCCAGAGCACGCCAGCCCGCCCGCCGACGACCCCGAGCGCCGCTTGTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR TCA 90 bp CCGGCAGGTCCTCGGGCTTGGTGCAGAGCTTCAGGGCGCGGGAGATaGACACGTCCAGGTCGAACTGGGGGCTGGCGCCGCCGTCCACCG +
Preference number: 1 (lower is better)
Translates to: PAGPRAWCRASGRGR*TRPGRTGGWRRRPP
Trigger: CGGTGGACGGCGGCGCCAGCCCCCAGTTCGACCTGGACGTGTTCATCTCCCGCGCCCTGAAGCTCTGCACCAAGCCCGAGGACCTGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 90 bp AGTGCGACTGCTCTAGGAAGCGCTCGGAGCTGCTGTGCGAGTCCTTaGGCGGGTCCACCTGCACGTCCTCAGCCAGTGGCGCCGAACCCG +
Preference number: 1 (lower is better)
Translates to: SATALGSARSCCASP*AGPPARPQPVAPNP
Trigger: CGGGTTCGGCGCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCAGCTCCGAGCGCTTCCTAGAGCAGTCGCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 90 bp CGCGCTCCATGGACGAGTGCGACTGCTCTAGGAAGCGCTCGGAGCTaGTGTGCGAGTCCTTGCGCGGGTCCACCTGCACGTCCTCAGCCA +
Preference number: 1 (lower is better)
Translates to: RAPWTSATALGSARS*CASPCAGPPARPQP
Trigger: TGGCTGAGGACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCAGCTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCATGGAGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 90 bp CGGCCCCTCCGCCCTCACCACCTTTCTTTGGAGAAGGCCTCGGTCTaGACGAGGTCGCCAGGGTGCTCGGGGATGCACGCACCATTGAGG +
Preference number: 1 (lower is better)
Translates to: RPLRPHHLSLEKASV*TRSPGCSGMHAPLR
Trigger: CCTCAATGGTGCGTGCATCCCCGAGCACCCTGGCGACCTCGTGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGGGCGGAGGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CCA 90 bp TGTAGTCGCAGGAGCGCCCGTAGTCGGCCTCGAAGGCGCGCTCCATaGACGAGTGCGACTGCTCTAGGAAGCGCTCGGAGCTGCTGTGCG +
Preference number: 1 (lower is better)
Translates to: CSRRSARSRPRRRAP*TSATALGSARSCCA
Trigger: CGCACAGCAGCTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTCGAGGCCGACTACGGGCGCTCCTGCGACTACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR TCA 90 bp CGGTCTGCACGAGGTCGCCAGGGTGCTCGGGGATGCACGCACCATTaGGGTCGCCCAGTTTATTGTCCGGCAGGTCCTCGGGCTTGGTGC +
Preference number: 1 (lower is better)
Translates to: RSARGRQGARGCTHH*GRPVYCPAGPRAWC
Trigger: GCACCAAGCCCGAGGACCTGCCGGACAATAAACTGGGCGACCTCAATGGTGCGTGCATCCCCGAGCACCCTGGCGACCTCGTGCAGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 90 bp TCCATGGACGAGTGCGACTGCTCTAGGAAGCGCTCGGAGCTGCTGTaGGAGTCCTTGCGCGGGTCCACCTGCACGTCCTCAGCCAGTGGC +
Preference number: 1 (lower is better)
Translates to: SMDECDCSRKRSELL*ESLRGSTCTSSASG
Trigger: GCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCAGCTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCATGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 90 bp CACCTTTCTTTGGAGAAGGCCTCGGTCTGCACGAGGTCGCCAGGGTaGTCGGGGATGCACGCACCATTGAGGTCGCCCAGTTTATTGTCC +
Preference number: 1 (lower is better)
Translates to: HLSLEKASVCTRSPG*SGMHAPLRSPSLLS
Trigger: GGACAATAAACTGGGCGACCTCAATGGTGCGTGCATCCCCGAGCACCCTGGCGACCTCGTGCAGACCGAGGCCTTCTCCAAAGAAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 90 bp TGCAAGATTTCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAGACTaGTGTCTAAAGCCGTTTCTTCCCTGTGCACCACATGTGGTCTCC +
Preference number: 1 (lower is better)
Translates to: CKISRHPATQVGPAD*CLKPFLPCAPHVVS
Trigger: GGAGACCACATGTGGTGCACAGGGAAGAAACGGCTTTAGACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAAATCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR GCA 90 bp GGCCAGATGGTTTCGGAGCTACCTCTGCAAGATTTCTCGGCATCCTaGCACCCAGGTGGGGCCCGCAGACTGCTGTCTAAAGCCGTTTCT +
Preference number: 1 (lower is better)
Translates to: GQMVSELPLQDFSAS*HPGGARRLLSKAVS
Trigger: AGAAACGGCTTTAGACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCGAAACCATCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR GCA 90 bp CCAGGTGGGGCCCGCAGACTGCTGTCTAAAGCCGTTTCTTCCCTGTaGACCACATGTGGTCTCCCCTTTGCTAGGAAAGTGATCAACCCC +
Preference number: 1 (lower is better)
Translates to: PGGARRLLSKAVSSL*TTCGLPFARKVINP
Trigger: GGGGTTGATCACTTTCCTAGCAAAGGGGAGACCACATGTGGTGCACAGGGAAGAAACGGCTTTAGACAGCAGTCTGCGGGCCCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CCA 90 bp CAGGGAGGTTGGAGGGATTCTTGGAATTGGTGCCTTCAACCTCACTaGGGTAGGACGCCCAGTGGGGAAAGAGGGCTGTGTCTTTGCGTG +
Preference number: 1 (lower is better)
Translates to: QGGWRDSWNWCLQPH*GRTPSGERGLCLCV
Trigger: CACGCAAAGACACAGCCCTCTTTCCCCACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTCCAACCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR GCA 90 bp CCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATaGTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACCT +
Preference number: 1 (lower is better)
Translates to: PHASAEGLCLHTITP*SVGEHTGLHAPNSP
Trigger: AGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CCA 90 bp ATGCTACCGTGTGGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCTaGGACCAACCTGGAGGTCAGACTCAGAGCTTTATTTCACCTCTC +
Preference number: 1 (lower is better)
Translates to: MLPCGSRTPQAANLA*DQPGGQTQSFISPL
Trigger: GAGAGGTGAAATAAAGCTCTGAGTCTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCCACACGGTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR TCA 90 bp TTTCTTCCCTGTGCACCACATGTGGTCTCCCCTTTGCTAGGAAAGTaGTCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAG +
Preference number: 1 (lower is better)
Translates to: FLPCAPHVVSPLLGK*STPKPGSCSNPLPQ
Trigger: CTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATCACTTTCCTAGCAAAGGGGAGACCACATGTGGTGCACAGGGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR TCA 90 bp TGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTaGGCACACAGGTTTGCATGCACCAAACTCACCTTAGCCTACACT +
Preference number: 1 (lower is better)
Translates to: CRGPVSTHHYPMLCG*AHRFACTKLTLAYT
Trigger: AGTGTAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CCA 90 bp CTAATTGCCTTTCCTCAGCTGTCAGTTGAGGCTAGTTGGGCCAGATaGTTTCGGAGCTACCTCTGCAAGATTTCTCGGCATCCTGCCACC +
Preference number: 1 (lower is better)
Translates to: LIAFPQLSVEASWAR*FRSYLCKISRHPAT
Trigger: GGTGGCAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCGAAACCATCTGGCCCAACTAGCCTCAACTGACAGCTGAGGAAAGGCAATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CCA 90 bp CTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTaGGTGAGCACACAGGTTTGCATGCACCAAACTCACCTTAGCCTA +
Preference number: 1 (lower is better)
Translates to: LLQRACVYTPLPHAL*VSTQVCMHQTHLSL
Trigger: TAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR GCA 90 bp GTCTACACACCATTACCCCATGCTCTGTGGGTGAGCACACAGGTTTaGATGCACCAAACTCACCTTAGCCTACACTATGAGGGGCATTGC +
Preference number: 1 (lower is better)
Translates to: VYTPLPHALWVSTQV*MHQTHLSLHYEGHC
Trigger: GCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CCA 90 bp AAGGTAGTGTCTGTGCTCAAGCCTAGCCCTCTGCCGTGTGGGGTATaGGTCCGGTTTTCTATTGAACATGCTATTCATGCTACCGTGTGG +
Preference number: 1 (lower is better)
Translates to: KVVSVLKPSPLPCGV*VRFSIEHAIHATVW
Trigger: CCACACGGTAGCATGAATAGCATGTTCAATAGAAAACCGGACCCATACCCCACACGGCAGAGGGCTAGGCTTGAGCACAGACACTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR TCA 90 bp ATGAGGTCTCCATGCTGGTGCCTGACCCCTAAGAGCCCTTGCTGTTaGCACCTCTCTTTTCATATCTTCCTACCTTTCTGGATTCCTTGC +
Preference number: 1 (lower is better)
Translates to: MRSPCWCLTPKSPCC*HLSFHIFLPFWIPC
Trigger: GCAAGGAATCCAGAAAGGTAGGAAGATATGAAAAGAGAGGTGTCAACAGCAAGGGCTCTTAGGGGTCAGGCACCAGCATGGAGACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR TCA 90 bp CTAACACATTTGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAATaGGCAGTTCATGTAGAGAACATTAGGTCCCGAGGTAGGTCTGGA +
Preference number: 1 (lower is better)
Translates to: LTHLLYGRTSLLSSK*AVHVENIRSRGRSG
Trigger: TCCAGACCTACCTCGGGACCTAATGTTCTCTACATGAACTGCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CCA 90 bp TGTTGGGTCCCATGTGAAACCTTCTCTCCTAACACATTTGCTCTATaGCAGGACCTCACTGCTGTCCTCCAAATGAGCAGTTCATGTAGA +
Preference number: 1 (lower is better)
Translates to: CWVPCETFSPNTFAL*QDLTAVLQMSSSCR
Trigger: TCTACATGAACTGCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGAGAAGGTTTCACATGGGACCCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR TCA 90 bp TTTCAACGTACAAATTATAGTTTGCTGATTAGATTTAAGGTGCTGTaGTGTGAGGGTGAACGCAGCCCAAGACCAACTGGTGGAATCCTC +
Preference number: 1 (lower is better)
Translates to: FQRTNYSLLIRFKVL*CEGERSPRPTGGIL
Trigger: GAGGATTCCACCAGTTGGTCTTGGGCTGCGTTCACCCTCACATCACAGCACCTTAAATCTAATCAGCAAACTATAATTTGTACGTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR GCA 90 bp TCTGATCCCAGCAGTGAGCAAAACAAAGTCCCTGTAATCATGAGGTaGACACTTTGGATGGAAAGACAGCTGAACAAACAAATGGATGAT +
Preference number: 1 (lower is better)
Translates to: SDPSSEQNKVPVIMR*TLWMERQLNKQMDD
Trigger: ATCATCCATTTGTTTGTTCAGCTGTCTTTCCATCCAAAGTGTGCACCTCATGATTACAGGGACTTTGTTTTGCTCACTGCTGGGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR CCA 90 bp AGCAGTGAGCAAAACAAAGTCCCTGTAATCATGAGGTGCACACTTTaGATGGAAAGACAGCTGAACAAACAAATGGATGATATGTCTAGT +
Preference number: 1 (lower is better)
Translates to: SSEQNKVPVIMRCTL*MERQLNKQMDDMSS
Trigger: ACTAGACATATCATCCATTTGTTTGTTCAGCTGTCTTTCCATCCAAAGTGTGCACCTCATGATTACAGGGACTTTGTTTTGCTCACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR CAA 90 bp TCGTCGGCGGGCGGGCTGGCGTGCTCTGGGCCGCCCTGCGTGCTCTaGACCCACTGCGCGATCTCCAGGAAGAGGCTGGCCGGCTCGTCC +
Preference number: 2 (lower is better)
Translates to: SSAGGLACSGPPCVL*THCAISRKRLAGSS
Trigger: GGACGAGCCGGCCAGCCTCTTCCTGGAGATCGCGCAGTGGGTCAAGAGCACGCAGGGCGGCCCAGAGCACGCCAGCCCGCCCGCCGACGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR GCA 90 bp AAGAGGCTGGCCGGCTCGTCCTCGCGCGCCCCCGTGTCCGCCAGCCCCGTGGCCATGGACGAGTGCGACTaGTCTAGGAAGCGCTCGGAG +
Preference number: 2 (lower is better)
Translates to: KRLAGSSSRAPVSASPVAMDECD*SRKRSE
Trigger: CTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCAT...GGCCACGGGGCTGGCGGACACGGGGGCGCGCGAGGACGAGCCGGCCAGCCTCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CAA 90 bp GCTCTGTGGGGCCTGGAGCGGCCCCTCCGCCCTCACCACCTTTCTTaGGAGAAGGCCTCGGTCTGCACGAGGTCGCCAGGGTGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: ALWGLERPLRPHHLS*EKASVCTRSPGCSG
Trigger: CCCCGAGCACCCTGGCGACCTCGTGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGGGCGGAGGGGCCGCTCCAGGCCCCACAGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR CCA 90 bp CGGCCCCTCCGCCCTCACCACCTTTCTTTGGAGAAGGCCTCGGTCTGCACGAGGCACGTCCTCAGCCAGTaGCGCCGAACCCGCGCGCGG +
Preference number: 2 (lower is better)
Translates to: RPLRPHHLSLEKASVCTRHVLSQ*RRTRAR
Trigger: CCGCGCGCGGGTTCGGCGCCACTGGCTGAGGACGTG...CCTCGTGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGGGCGGAGGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CAA 90 bp GAGTGCGACTGCTCTAGGAAGCGCTCGGAGCTGCTGTGCGAGTCCTaGCGCGGGTCCACCTGCACGTCCTCAGCCAGTGGCGCCGAACCC +
Preference number: 2 (lower is better)
Translates to: ECDCSRKRSELLCES*RGSTCTSSASGAEP
Trigger: GGGTTCGGCGCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCAGCTCCGAGCGCTTCCTAGAGCAGTCGCACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR GCA 90 bp GCTTGTCCAGGTAGGACGGCGACCCCACCTTGTAGTCGCAGGAGCGCCCGTAGTCGCTCGGAGCTGCTGTaGGAGTCCTTGCGCGGGTCC +
Preference number: 2 (lower is better)
Translates to: ACPGRTATPPCSRRSARSRSELL*ESLRGS
Trigger: GGACCCGCGCAAGGACTCGCACAGCAGCTCCGAGCG...ACTACGGGCGCTCCTGCGACTACAAGGTGGGGTCGCCGTCCTACCTGGACAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CAA 90 bp CCAGGGTGCTCGGGGATGCACGCACCATTGAGGTCGCCCAGTTTATaGTCCGGCAGGTCCTCGGGCTTGGTGCAGAGCTTCAGGGCGCGG +
Preference number: 2 (lower is better)
Translates to: PGCSGMHAPLRSPSL*SGRSSGLVQSFRAR
Trigger: CCGCGCCCTGAAGCTCTGCACCAAGCCCGAGGACCTGCCGGACAATAAACTGGGCGACCTCAATGGTGCGTGCATCCCCGAGCACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CAA 90 bp TCGGTCTGCACGAGGTCGCCAGGGTGCTCGGGGATGCACGCACCATaGAGGTCGCCCAGTTTATTGTCCGGCAGGTCCTCGGGCTTGGTG +
Preference number: 2 (lower is better)
Translates to: SVCTRSPGCSGMHAP*RSPSLLSGRSSGLV
Trigger: CACCAAGCCCGAGGACCTGCCGGACAATAAACTGGGCGACCTCAATGGTGCGTGCATCCCCGAGCACCCTGGCGACCTCGTGCAGACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR GCA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGGGCGGCCGCCTCCTaGCAGCCCCGGCTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSRAAAS*QPRLSL
Trigger: CAGAGAAAGCCGGGGCTGGCAGGAGGCGGCCGCCCT...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
3UTR-3UTR GCA 90 bp GCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCACACAGGCGCGCCGGCCGCCTaGTTCCAGTGCGACAGGTCC +
Preference number: 2 (lower is better)
Translates to: AEGLCLHTITPCSVGEHTGAPAA*FQCDRS
Trigger: GGACCTGTCGCACTGGAAGCAGGCGGCCGGCGCGCC...TGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR CCA 90 bp TTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGGGGTCTCCTGCTCTGTaGGGCCTGGAGCGGCCCCTC +
Preference number: 2 (lower is better)
Translates to: FLSLLGSFTCSANPKAAEGSPAL*GLERPL
Trigger: GAGGGGCCGCTCCAGGCCCCACAGAGCAGGAGACCC...CTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
3UTR-3UTR CCA 90 bp TTGAGGTCGCCCAGTTTATTGTCCGGCAGGTCCTCGGGCTTGGTGCAGAGCTTCCGCGCTGTACCTCGCTaGCGTCCTGGCACCGGTCAG +
Preference number: 2 (lower is better)
Translates to: LRSPSLLSGRSSGLVQSFRAVPR*RPGTGQ
Trigger: CTGACCGGTGCCAGGACGCCAGCGAGGTACAGCGCG...GAAGCTCTGCACCAAGCCCGAGGACCTGCCGGACAATAAACTGGGCGACCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR CCA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCGGGCTGGCGTGCTCTaGGCCGCCCTGCGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: ASAEGLCLHTITPCSVGERAGVL*AALRAL
Trigger: AAGAGCACGCAGGGCGGCCCAGAGCACGCCAGCCCG...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CAA 90 bp GCACCATTGAGGTCGCCCAGTTTATTGTCCGGCAGGTCCTCGGGCTaGGTGCAGAGCTTCAGGGCGCGGGAGATGAACACGTCCAGGTCG +
Preference number: 2 (lower is better)
Translates to: APLRSPSLLSGRSSG*VQSFRAREMNTSRS
Trigger: CGACCTGGACGTGTTCATCTCCCGCGCCCTGAAGCTCTGCACCAAGCCCGAGGACCTGCCGGACAATAAACTGGGCGACCTCAATGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR GCA 90 bp CTGTCAGTGTCCCCACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTTCTCTGGGGGTCTCCTaGTCTGTGGGGCCTGGAGCG +
Preference number: 2 (lower is better)
Translates to: LSVSPPHASAEGLCLHTISLGVS*SVGPGA
Trigger: CGCTCCAGGCCCCACAGAGCAGGAGACCCCCAGAGA...AATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGTGGGGACACTGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp GGGGAAAGAGGGCTGTGTCTTTGCGTGTCAGGAAAGTGCATAGGGAGTGCTGAGAGGGCGGCCGCCTCCTaGCAGCCCCGGCTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: GERGLCLCVSGKCIGSAERAAAS*QPRLSL
Trigger: CAGAGAAAGCCGGGGCTGGCAGGAGGCGGCCGCCCT...CTCAGCACTCCCTATGCACTTTCCTGACACGCAAAGACACAGCCCTCTTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp TGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCAGTGGGGAAAGAGGGGGAAGCGCTCGGAGCTaGTGTGCGAGTCCTTGCGCG +
Preference number: 2 (lower is better)
Translates to: WNWCLQPHWGRTPSGERGGSARS*CASPCA
Trigger: CGCGCAAGGACTCGCACAGCAGCTCCGAGCGCTTCC...CCCTCTTTCCCCACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR CCA 90 bp CCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGATCCTGCCACCCAGGTaGGGCCCGCAGACTGCTGTC +
Preference number: 2 (lower is better)
Translates to: PHASAEGLCLHTITPCSVILPPR*GPQTAV
Trigger: GACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGAT...CACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTACCTCGCTGGCGTCCTaGCACCGGTCAGGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPTSLAS*HRSGRH
Trigger: GTGGCGGCCTGACCGGTGCCAGGACGCCAGCGAGGT...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR GCA 90 bp AGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGGGGGCCAGGAGACTTCTCTGGGGGTCTCCTaGTCTGTGGGGCCTGGAGCG +
Preference number: 2 (lower is better)
Translates to: SRGRHSMVDRPWPGGQETSLGVS*SVGPGA
Trigger: CGCTCCAGGCCCCACAGAGCAGGAGACCCCCAGAGA...AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp ACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTACGAGGTCGCCAGGGTaGTCGGGGATGCACGCACCA +
Preference number: 2 (lower is better)
Translates to: TPRFCRGPVSTHHYPMLCTRSPG*SGMHAP
Trigger: TGGTGCGTGCATCCCCGAGCACCCTGGCGACCTCGT...ACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR GCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGATTTCTCGGCATCCTaGCACCCAGGTGGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPDFSAS*HPGGAR
Trigger: GCGGGCCCCACCTGGGTGGCAGGATGCCGAGAAATC...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAAGCCCCGGCTTTCTCTaGGGGTCTCCTGCTCTGTGG +
Preference number: 2 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRSPGFL*GSPALW
Trigger: CCACAGAGCAGGAGACCCCCAGAGAAAGCCGGGGCT...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
3UTR-3UTR TCA 90 bp GCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCACACACTCCATGCTGGTGCCTaGCCCCTAAGAGCCCTTGCT +
Preference number: 2 (lower is better)
Translates to: AEGLCLHTITPCSVGEHTLHAGA*PLRALA
Trigger: AGCAAGGGCTCTTAGGGGTCAGGCACCAGCATGGAG...TGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCATCTCTGGGGGTCTCCTaGTCTGTGGGGCCTGGAGCG +
Preference number: 2 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPSLGVS*SVGPGA
Trigger: CGCTCCAGGCCCCACAGAGCAGGAGACCCCCAGAGA...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
3UTR-3UTR CCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCGGGTCTCCTGCTCTGTaGGGCCTGGAGCGGCCCCTC +
Preference number: 2 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSAGSPAL*GLERPL
Trigger: GAGGGGCCGCTCCAGGCCCCACAGAGCAGGAGACCC...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
3UTR-3UTR CCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCGGGTCTCCTGCTCTGTaGGGCCTGGAGCGGCCCCTC +
Preference number: 2 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTGSPAL*GLERPL
Trigger: GAGGGGCCGCTCCAGGCCCCACAGAGCAGGAGACCC...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
3UTR-3UTR CCA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGTGCCTTCAACCTCACTaGGGTAGGACGCCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: ASAEGLCLHTITPCSVGECLQPH*GRTPSG
Trigger: CCCACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCA...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp CGGAGCTACCTCTGCAAGATTTCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAGAAGATTTCCGACCATaGAGGGGTGAGGCAAATACA +
Preference number: 2 (lower is better)
Translates to: RSYLCKISRHPATQVGPAEDFRP*RGEANT
Trigger: TGTATTTGCCTCACCCCTGCATGGTCGGAAATCTTC...TGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp CATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACCTTAGCCTAGAGAAGGCCTCGGTCTaGACGAGGTCGCCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: HALWVSTQVCMHQTHLSLEKASV*TRSPGC
Trigger: GCACCCTGGCGACCTCGTGCAGACCGAGGCCTTCTC...TAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR CCA 90 bp GGGGAAAGAGGGCTGTGTCTTTGCGTGTCAGGAAAGTGCATAGGGAGTGCTGAGCGAAGGCGCGCTCCATaGACGAGTGCGACTGCTCTA +
Preference number: 2 (lower is better)
Translates to: GERGLCLCVSGKCIGSAERRRAP*TSATAL
Trigger: TAGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTCG...CTCAGCACTCCCTATGCACTTTCCTGACACGCAAAGACACAGCCCTCTTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR CCA 90 bp CGACCATGCAGGGGTGAGGCAAATACAGGGGTGCGACAGATGAGAACATTTAAGGCAGGTCCTCGGGCTTaGTGCAGAGCTTCAGGGCGC +
Preference number: 2 (lower is better)
Translates to: RPCRGEANTGVRQMRTFKAGPRA*CRASGR
Trigger: GCGCCCTGAAGCTCTGCACCAAGCCCGAGGACCTGC...CTTAAATGTTCTCATCTGTCGCACCCCTGTATTTGCCTCACCCCTGCATGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR CCA 90 bp AGGGGCGAGCCACGTGGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCTGCCTGGGACCAACCTaGAGGTCAGACTCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: RGEPRGHVVEDMRRWSLSCLGPT*RSDSEL
Trigger: AAGCTCTGAGTCTGACCTCCAGGTTGGTCCCAGGCA...GCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCCACGTGGCTCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR CCA 90 bp GGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCCCCAGGCCTCCCCTTGCTGCTAATCTTGCCTaGGACCAACCTGGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: GHVVEDMRRWSLSPRPPLAANLA*DQPGGQ
Trigger: CTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGC...AAGGGGAGGCCTGGGGCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR TCA 90 bp CCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGGGCATTGCTGCTTTaGGTCCCTTCCTTTGTCATG +
Preference number: 2 (lower is better)
Translates to: PHASAEGLCLHTITPCSVGALLL*VPSFVM
Trigger: CATGACAAAGGAAGGGACTCAAAGCAGCAATGCCCC...CACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp ACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGTCATGAGGTCTCCATaGTGGTGCCTGACCCCTAAG +
Preference number: 2 (lower is better)
Translates to: TPRFCRGPVSTHHYPMLCVMRSP*WCLTPK
Trigger: CTTAGGGGTCAGGCACCAGCATGGAGACCTCATGAC...ACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp AAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTTGAGTCCCTTCCTTGGTCCTCGGGCTTGGTaGAGAGCTTCAGGGCGCGGG +
Preference number: 2 (lower is better)
Translates to: KLTLAYTMRGIAALSPFLGPRAW*RASGRG
Trigger: CCCGCGCCCTGAAGCTCTGCACCAAGCCCGAGGACC...AAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR CCA 90 bp TCTCCTAACACATTTGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAATGAGCATCCTGCCACCCAGGTaGGGCCCGCAGACTGCTGTC +
Preference number: 2 (lower is better)
Translates to: SPNTFALWQDLTAVLQMSILPPR*GPQTAV
Trigger: GACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGAT...GCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CCA 90 bp AAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTTGAGTCCCTTCCTTTCTCCAGGAAGAGGCTaGCCGGCTCGTCCTCGCGCG +
Preference number: 2 (lower is better)
Translates to: KLTLAYTMRGIAALSPFLSPGRG*PARPRA
Trigger: CGCGCGAGGACGAGCCGGCCAGCCTCTTCCTGGAGA...AAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR TCA 90 bp CGACCATGCAGGGGTGAGGCAAATACAGGGGTGCGACAGATGAGAACATTTAAGTCAGGGCGCGGGAGATaGACACGTCCAGGTCGAACT +
Preference number: 2 (lower is better)
Translates to: RPCRGEANTGVRQMRTFKSGRGR*TRPGRT
Trigger: AGTTCGACCTGGACGTGTTCATCTCCCGCGCCCTGA...CTTAAATGTTCTCATCTGTCGCACCCCTGTATTTGCCTCACCCCTGCATGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR GCA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGATCCTTCACGTGTTCTaGCAACCCCAAGGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: ASAEGLCLHTITPCSVGEILHVF*QPQGSR
Trigger: TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGAT...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp CCATTACCCCATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACAGGTCTCCATGCTGGTaGCTGACCCCTAAGAGCCCT +
Preference number: 2 (lower is better)
Translates to: PLPHALWVSTQVCMHQTHRSPCW*LTPKSP
Trigger: AGGGCTCTTAGGGGTCAGGCACCAGCATGGAGACCT...GTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAGCCCCGGCTTTCTCTaGGGGTCTCCTGCTCTGTGG +
Preference number: 2 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSASPGFL*GSPALW
Trigger: CCACAGAGCAGGAGACCCCCAGAGAAAGCCGGGGCT...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
3UTR-3UTR CCA 90 bp CATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACCTTAGCCTATGCCTTCAACCTCACTaGGGTAGGACGCCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: HALWVSTQVCMHQTHLSLCLQPH*GRTPSG
Trigger: CCCACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCA...TAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CCA 90 bp AGGGGCGAGCCACGTGGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCCTGCCGTGTGGGGTATaGGTCCGGTTTTCTATTGAA +
Preference number: 2 (lower is better)
Translates to: RGEPRGHVVEDMRRWSLSLPCGV*VRFSIE
Trigger: TTCAATAGAAAACCGGACCCATACCCCACACGGCAG...GCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCCACGTGGCTCGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR TCA 90 bp ACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTAGATTTAAGGTGCTGTaGTGTGAGGGTGAACGCAGC +
Preference number: 2 (lower is better)
Translates to: TPRFCRGPVSTHHYPMLCRFKVL*CEGERS
Trigger: GCTGCGTTCACCCTCACATCACAGCACCTTAAATCT...ACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp CTGTCAGTGTCCCCACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTAGAGGGCTGTGTCTTTaGGTGTCAGGAAAGTGCATA +
Preference number: 2 (lower is better)
Translates to: LSVSPPHASAEGLCLHTIRGLCL*VSGKCI
Trigger: TATGCACTTTCCTGACACGCAAAGACACAGCCCTCT...AATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGTGGGGACACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp GCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCACACACACTATGAGGGGCATTaGTGCTTTGAGTCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: AEGLCLHTITPCSVGEHTHYEGH*CFESLP
Trigger: AGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTG...TGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CCA 90 bp GGGGAAAGAGGGCTGTGTCTTTGCGTGTCAGGAAAGTGCATAGGGAGTGCTGAGTGCTGGCAGGGAGGTTaGAGGGATTCTTGGAATTGG +
Preference number: 2 (lower is better)
Translates to: GERGLCLCVSGKCIGSAECWQGG*RDSWNW
Trigger: CCAATTCCAAGAATCCCTCCAACCTCCCTGCCAGCA...CTCAGCACTCCCTATGCACTTTCCTGACACGCAAAGACACAGCCCTCTTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CCA 90 bp CTGTCAGTGTCCCCACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTATCTTCCTACCTTTCTaGATTCCTTGCCCCCAAGGT +
Preference number: 2 (lower is better)
Translates to: LSVSPPHASAEGLCLHTIIFLPF*IPCPQG
Trigger: ACCTTGGGGGCAAGGAATCCAGAAAGGTAGGAAGAT...AATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGTGGGGACACTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CAA 90 bp TATTCATGCTACCGTGTGGAAGCCGGACCCCTCAGGCTGCTAATCTaGCCTGGGACCAACCTGGAGGTCAGACTCAGAGCTTTATTTCAC +
Preference number: 2 (lower is better)
Translates to: YSCYRVEAGPLRLLI*PGTNLEVRLRALFH
Trigger: GTGAAATAAAGCTCTGAGTCTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCCACACGGTAGCATGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR TCA 90 bp ACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTCTGCTGTCCTCCAAATaGGCAGTTCATGTAGAGAAC +
Preference number: 2 (lower is better)
Translates to: TPRFCRGPVSTHHYPMLCLLSSK*AVHVEN
Trigger: GTTCTCTACATGAACTGCTCATTTGGAGGACAGCAG...ACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp TCTCCTAACACATTTGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAATGAGCGCCGTTTCTTCCCTGTaGACCACATGTGGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: SPNTFALWQDLTAVLQMSAVSSL*TTCGLP
Trigger: GGGGAGACCACATGTGGTGCACAGGGAAGAAACGGC...GCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp TCCTTGCCCCCAAGGTCACGACGTGCTCTCCAACACATCTCTGTAGGGTCTGCTGATTCTTGGAATTGGTaGCTTCAACCTCACTGGGGT +
Preference number: 2 (lower is better)
Translates to: SLPPRSRRALQHISVGSADSWNW*LQPHWG
Trigger: ACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATC...AGCAGACCCTACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGGGGCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp TCTCAGACCAAGTTTCTAACAAAAAGCCAGAACGACCCCAGTAGAGGAAGACATTTGCGCGGGTCCACCTaGACGTCCTCAGCCAGTGGC +
Preference number: 2 (lower is better)
Translates to: SQTKFLTKSQNDPSRGRHLRGST*TSSASG
Trigger: GCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAA...ATGTCTTCCTCTACTGGGGTCGTTCTGGCTTTTTGTTAGAAACTTGGTCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR CCA 90 bp GGGGAAAGAGGGCTGTGTCTTTGCGTGTCAGGAAAGTGCATAGGGAGTGCTGAGATGGTAGAATGTTCCTaGGGACCAGATAGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: GERGLCLCVSGKCIGSAEMVECS*GPDRGC
Trigger: ACAGCCCCTATCTGGTCCCCAGGAACATTCTACCAT...CTCAGCACTCCCTATGCACTTTCCTGACACGCAAAGACACAGCCCTCTTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CAA 90 bp TGCACCAAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTaGAGTCCCTTCCTTTGTCATGAGGTCTCCATGCTGGTGCCTGAC +
Preference number: 2 (lower is better)
Translates to: CTKLTLAYTMRGIAA*SPFLCHEVSMLVPD
Trigger: GTCAGGCACCAGCATGGAGACCTCATGACAAAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTTGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR TCA 90 bp GCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCACACAGGAAAGTATGCTTGGTaGCTAGGAGAAACAAACTGG +
Preference number: 2 (lower is better)
Translates to: AEGLCLHTITPCSVGEHTGKYAW*LGETNW
Trigger: CCAGTTTGTTTCTCCTAGTCACCAAGCATACTTTCC...TGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR TCA 90 bp AAAGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCAGGCTGTTCTGACCTaGAACGAAGATTTCCGACCA +
Preference number: 2 (lower is better)
Translates to: KARTTPVEEDILWWTDPGQAVLT*NEDFRP
Trigger: TGGTCGGAAATCTTCGTTTCAGGTCAGAACAGCCTG...GCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp CTAGTTGGGCCAGATGGTTTCGGAGCTACCTCTGCAAGATTTCTCGGCATCCTGTTAAGCGAGTGTCTCTaGCTCTCTGGGCCTAATTGC +
Preference number: 2 (lower is better)
Translates to: LVGPDGFGATSARFLGILLSECL*LSGPNC
Trigger: GCAATTAGGCCCAGAGAGGCAGAGACACTCGCTTAA...CAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCGAAACCATCTGGCCCAACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp ACATGCTATTCATGCTACCGTGTGGAAGCCGGACCCCTCAGGCTGCTAATCTTGATAATAACAGCCACCTaGCAGGTGCTGACCATGTGC +
Preference number: 2 (lower is better)
Translates to: TCYSCYRVEAGPLRLLILIITAT*QVLTMC
Trigger: GCACATGGTCAGCACCTGGCAGGTGGCTGTTATTAT...CAAGATTAGCAGCCTGAGGGGTCCGGCTTCCACACGGTAGCATGAATAGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR TCA 90 bp GATGATCAAACTCAGGAAAGTATTGATGAAGGATGTTGGGTCCCATGTGAAACCCCGACCATGCAGGGGTaGGGCAAATACAGGGGTGCG +
Preference number: 2 (lower is better)
Translates to: DDQTQESIDEGCWVPCETPTMQG*GKYRGA
Trigger: CGCACCCCTGTATTTGCCTCACCCCTGCATGGTCGG...GGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR TCA 90 bp CGACCATGCAGGGGTGAGGCAAATACAGGGGTGCGACAGATGAGAACATTTAAGCAGGCTGTTCTGACCTaGAACGAAGATTTCCGACCA +
Preference number: 2 (lower is better)
Translates to: RPCRGEANTGVRQMRTFKQAVLT*NEDFRP
Trigger: TGGTCGGAAATCTTCGTTTCAGGTCAGAACAGCCTG...CTTAAATGTTCTCATCTGTCGCACCCCTGTATTTGCCTCACCCCTGCATGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR GCA 90 bp GATGATCAAACTCAGGAAAGTATTGATGAAGGATGTTGGGTCCCATGTGAAACCTGCTGTGCGAGTCCTTaGGCGGGTCCACCTGCACGT +
Preference number: 2 (lower is better)
Translates to: DDQTQESIDEGCWVPCETCCASP*AGPPAR
Trigger: ACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCA...GGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR CCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTAGGCAGTTTAAGAAATaGACATTCCTCTCGCTCCTC +
Preference number: 2 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKARQFKK*TFLSLL
Trigger: GAGGAGCGAGAGGAATGTCCATTTCTTAAACTGCCT...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
3UTR-3UTR CCA 90 bp GATGATCAAACTCAGGAAAGTATTGATGAAGGATGTTGGGTCCCATGTGAAACCATGGTGGACAGACCCTaGCCTGGGGGCCAGGAGACT +
Preference number: 2 (lower is better)
Translates to: DDQTQESIDEGCWVPCETMVDRP*PGGQET
Trigger: AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCAT...GGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CCA 90 bp CCATTACCCCATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACATCTTCCTACCTTTCTaGATTCCTTGCCCCCAAGGT +
Preference number: 2 (lower is better)
Translates to: PLPHALWVSTQVCMHQTHIFLPF*IPCPQG
Trigger: ACCTTGGGGGCAAGGAATCCAGAAAGGTAGGAAGAT...GTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR TCA 90 bp CCATTACCCCATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACGGAAAGTATGCTTGGTaGCTAGGAGAAACAAACTGG +
Preference number: 2 (lower is better)
Translates to: PLPHALWVSTQVCMHQTHGKYAW*LGETNW
Trigger: CCAGTTTGTTTCTCCTAGTCACCAAGCATACTTTCC...GTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CCA 90 bp GGTTGGAGGGATTCTTGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCCTAGGAGAAACAAACTaGTTCAGTTTCCAGTTTCAG +
Preference number: 2 (lower is better)
Translates to: GWRDSWNWCLQPHWGRTPLGETN*FSFQFQ
Trigger: CTGAAACTGGAAACTGAACCAGTTTGTTTCTCCTAG...GGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTCCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR TCA 90 bp AGACAGCTGAACAAACAAATGGATGATATGTCTAGTGGAGATAAGTGCAAGGAACCACCTGCCAGGTGCTaGCCATGTGCTTGGGGTGCT +
Preference number: 2 (lower is better)
Translates to: RQLNKQMDDMSSGDKCKEPPARC*PCAWGA
Trigger: AGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGG...TTCCTTGCACTTATCTCCACTAGACATATCATCCATTTGTTTGTTCAGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR CCA 90 bp CTGTCAGTGTCCCCACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTTTTGTCAAGGCTAAATaGATGATCAAACTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: LSVSPPHASAEGLCLHTIFVKAK*MIKLRK
Trigger: TTTCCTGAGTTTGATCATCCATTTAGCCTTGACAAA...AATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGTGGGGACACTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CCA 90 bp ACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTATGGCACATGAGGAGTaGTGTACATTTCTTTTTCTT +
Preference number: 2 (lower is better)
Translates to: TPRFCRGPVSTHHYPMLCMAHEE*CTFLFL
Trigger: AAGAAAAAGAAATGTACACCACTCCTCATGTGCCAT...ACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CCA 90 bp AGGGGCGAGCCACGTGGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCTTTTCATTTTACATTTaGGGATATTACTGCAGGACC +
Preference number: 2 (lower is better)
Translates to: RGEPRGHVVEDMRRWSLSFSFYI*GYYCRT
Trigger: GGTCCTGCAGTAATATCCCCAAATGTAAAATGAAAA...GCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCCACGTGGCTCGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR TCA 90 bp AGACAGCTGAACAAACAAATGGATGATATGTCTAGTGGAGATAAGTGCAAGGAAGGCAGCGAGGGCTCCTaGAGGCAAGAGCCAGTTGTT +
Preference number: 2 (lower is better)
Translates to: RQLNKQMDDMSSGDKCKEGSEGS*RQEPVV
Trigger: AACAACTGGCTCTTGCCTTCAGGAGCCCTCGCTGCC...TTCCTTGCACTTATCTCCACTAGACATATCATCCATTTGTTTGTTCAGCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR TCA 90 bp TCTCAGACCAAGTTTCTAACAAAAAGCCAGAACGACCCCAGTAGAGGAAGACATCAGGGGTGCGACAGATaGGAACATTTAAGTACTTGG +
Preference number: 2 (lower is better)
Translates to: SQTKFLTKSQNDPSRGRHQGCDR*EHLSTW
Trigger: CCAAGTACTTAAATGTTCTCATCTGTCGCACCCCTG...ATGTCTTCCTCTACTGGGGTCGTTCTGGCTTTTTGTTAGAAACTTGGTCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CCA 90 bp CCATTACCCCATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACTTTGTCAAGGCTAAATaGATGATCAAACTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: PLPHALWVSTQVCMHQTHFVKAK*MIKLRK
Trigger: TTTCCTGAGTTTGATCATCCATTTAGCCTTGACAAA...GTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR TCA 90 bp TTTGCCAGCAGTAGCTCAGCTCACCTCCTGAGAACCCTGTTGAAGGTATTTATTGGTCCGGTTTTCTATTaGACATGCTATTCATGCTAC +
Preference number: 2 (lower is better)
Translates to: FASSSSAHLLRTLLKVFIGPVFY*TCYSCY
Trigger: GTAGCATGAATAGCATGTTCAATAGAAAACCGGACC...AATAAATACCTTCAACAGGGTTCTCAGGAGGTGAGCTGAGCTACTGCTGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR GCA 90 bp GATGATCAAACTCAGGAAAGTATTGATGAAGGATGTTGGGTCCCATGTGAAACCGGAGCCAGGAAAGTATaGTTGGTGACTAGGAGAAAC +
Preference number: 2 (lower is better)
Translates to: DDQTQESIDEGCWVPCETGARKV*LVTRRN
Trigger: GTTTCTCCTAGTCACCAAGCATACTTTCCTGGCTCC...GGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CAA 90 bp CTGCTGTTTGTCAAGGCTAAATGGATGATCAAACTCAGGAAAGTATaGATGAAGGATGTTGGGTCCCATGTGAAACCTTCTCTCCTAACA +
Preference number: 2 (lower is better)
Translates to: LLFVKAKWMIKLRKV*MKDVGSHVKPSLLT
Trigger: TGTTAGGAGAGAAGGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATCCATTTAGCCTTGACAAACAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR TCA 90 bp CAGAATACAAGAAACATTGCTCTGAATAAAAGAACATCGAATGGTAATGGACAGCCTTTGCTAGGAAAGTaGTCAACCCCTAAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: QNTRNIALNKRTSNGNGQPLLGK*STPKPG
Trigger: CCCTGGCTTAGGGGTTGATCACTTTCCTAGCAAAGG...CTGTCCATTACCATTCGATGTTCTTTTATTCAGAGCAATGTTTCTTGTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR TCA 90 bp AGACAGCTGAACAAACAAATGGATGATATGTCTAGTGGAGATAAGTGCAAGGAAGTCCAAAAGCACTTTTaGGGAGTGGGTAATAATAAC +
Preference number: 2 (lower is better)
Translates to: RQLNKQMDDMSSGDKCKEVQKHF*GVGNNN
Trigger: GTTATTATTACCCACTCCTCAAAAGTGCTTTTGGAC...TTCCTTGCACTTATCTCCACTAGACATATCATCCATTTGTTTGTTCAGCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR GCA 72 bp AAGCGGCGCTCGGGGTCGTCGGCGGGCGGGCTGGCGTaGTCTGGGCCGCCCTGCGTGCTCTTGACCCACTGC +
Preference number: 3 (lower is better)
Translates to: KRRSGSSAGGLA*SGPPCVLLTHC
Trigger: GCAGTGGGTCAAGAGCACGCAGGGCGGCCCAGAGCACGCCAGCCCGCCCGCCGACGACCCCGAGCGCCGCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CCA 72 bp CCCGCGCGCGGGTCGCGCTGTACCTCGCTGGCGTCCTaGCACCGGTCAGGCCGCCACTCCAGGTCCGACGAC +
Preference number: 3 (lower is better)
Translates to: PARGSRCTSLAS*HRSGRHSRSDD
Trigger: GTCGTCGGACCTGGAGTGGCGGCCTGACCGGTGCCAGGACGCCAGCGAGGTACAGCGCGACCCGCGCGCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CCA 72 bp GCGCCGAACCCGCGCGCGGGTCGCGCTGTACCTCGCTaGCGTCCTGGCACCGGTCAGGCCGCCACTCCAGGT +
Preference number: 3 (lower is better)
Translates to: APNPRAGRAVPR*RPGTGQAATPG
Trigger: ACCTGGAGTGGCGGCCTGACCGGTGCCAGGACGCCAGCGAGGTACAGCGCGACCCGCGCGCGGGTTCGGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CCA 72 bp TTCAGGGCGCGGGAGATGAACACGTCCAGGTCGAACTaGGGGCTGGCGCCGCCGTCCACCGGGGCCGGGCGG +
Preference number: 3 (lower is better)
Translates to: FRAREMNTSRSN*GLAPPSTGAGR
Trigger: CCGCCCGGCCCCGGTGGACGGCGGCGCCAGCCCCCAGTTCGACCTGGACGTGTTCATCTCCCGCGCCCTGAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CCA 72 bp GTCCTTGCGCGGGTCCACCTGCACGTCCTCAGCCAGTaGCGCCGAACCCGCGCGCGGGTCGCGCTGTACCTC +
Preference number: 3 (lower is better)
Translates to: VLARVHLHVLSQ*RRTRARVALYL
Trigger: GAGGTACAGCGCGACCCGCGCGCGGGTTCGGCGCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAAGGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 72 bp TCGGAGCTGCTGTGCGAGTCCTTGCGCGGGTCCACCTaGACGTCCTCAGCCAGTGGCGCCGAACCCGCGCGC +
Preference number: 3 (lower is better)
Translates to: SELLCESLRGST*TSSASGAEPAR
Trigger: GCGCGCGGGTTCGGCGCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCAGCTCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 72 bp GCGTGCTCTGGGCCGCCCTGCGTGCTCTTGACCCACTaGGCGATCTCCAGGAAGAGGCTGGCCGGCTCGTCC +
Preference number: 3 (lower is better)
Translates to: ACSGPPCVLLTH*AISRKRLAGSS
Trigger: GGACGAGCCGGCCAGCCTCTTCCTGGAGATCGCGCAGTGGGTCAAGAGCACGCAGGGCGGCCCAGAGCACGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR TCA 72 bp CCTCGGGCTTGGTGCAGAGCTTCAGGGCGCGGGAGATaGACACGTCCAGGTCGAACTGGGGGCTGGCGCCGC +
Preference number: 3 (lower is better)
Translates to: PRAWCRASGRGR*TRPGRTGGWRR
Trigger: GCGGCGCCAGCCCCCAGTTCGACCTGGACGTGTTCATCTCCCGCGCCCTGAAGCTCTGCACCAAGCCCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR CAA 90 bp CGGCCCCTCCGCCCTCACCACCTTTCTTTGGAGAAGGCCTCGGTCTGCACGAGGCTGCTGTGCGAGTCCTaGCGCGGGTCCACCTGCACG +
Preference number: 3 (lower is better)
Translates to: RPLRPHHLSLEKASVCTRLLCES*RGSTCT
Trigger: CGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCAG...CCTCGTGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGGGCGGAGGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CCA 72 bp AGGAGCGCCCGTAGTCGGCCTCGAAGGCGCGCTCCATaGACGAGTGCGACTGCTCTAGGAAGCGCTCGGAGC +
Preference number: 3 (lower is better)
Translates to: RSARSRPRRRAP*TSATALGSARS
Trigger: GCTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTCGAGGCCGACTACGGGCGCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CCA 72 bp GCCTGGAGCGGCCCCTCCGCCCTCACCACCTTTCTTTaGAGAAGGCCTCGGTCTGCACGAGGTCGCCAGGGT +
Preference number: 3 (lower is better)
Translates to: AWSGPSALTTFL*RRPRSARGRQG
Trigger: ACCCTGGCGACCTCGTGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGGGCGGAGGGGCCGCTCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 72 bp TCGGCCTCGAAGGCGCGCTCCATGGACGAGTGCGACTaGTCTAGGAAGCGCTCGGAGCTGCTGTGCGAGTCC +
Preference number: 3 (lower is better)
Translates to: SASKARSMDECD*SRKRSELLCES
Trigger: GGACTCGCACAGCAGCTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTCGAGGCCGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR TCA 72 bp CGCCGGCCGCCTGCTTCCAGTGCGACAGGTCCAGGATaGGCTTGGGCTCCGAGTAGTGGTGCGGCTTGTTGT +
Preference number: 3 (lower is better)
Translates to: RRPPASSATGPG*AWAPSSGAACC
Trigger: ACAACAAGCCGCACCACTACTCGGAGCCCAAGCTCATCCTGGACCTGTCGCACTGGAAGCAGGCGGCCGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 72 bp GAGTGCGACTGCTCTAGGAAGCGCTCGGAGCTGCTGTaGGAGTCCTTGCGCGGGTCCACCTGCACGTCCTCA +
Preference number: 3 (lower is better)
Translates to: ECDCSRKRSELL*ESLRGSTCTSS
Trigger: TGAGGACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCAGCTCCGAGCGCTTCCTAGAGCAGTCGCACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 72 bp TGGACGAGTGCGACTGCTCTAGGAAGCGCTCGGAGCTaGTGTGCGAGTCCTTGCGCGGGTCCACCTGCACGT +
Preference number: 3 (lower is better)
Translates to: WTSATALGSARS*CASPCAGPPAR
Trigger: ACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCAGCTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR GCA 72 bp TTGGAGAAGGCCTCGGTCTGCACGAGGTCGCCAGGGTaGTCGGGGATGCACGCACCATTGAGGTCGCCCAGT +
Preference number: 3 (lower is better)
Translates to: LEKASVCTRSPG*SGMHAPLRSPS
Trigger: ACTGGGCGACCTCAATGGTGCGTGCATCCCCGAGCACCCTGGCGACCTCGTGCAGACCGAGGCCTTCTCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR-3UTR CAA 90 bp GGGAGGCAGCGAGGGCTCCTGAAGGCAAGAGCCAGTTGTTTTCCCTCTGTCTGCGTGCTGACCATGTGCTaGGGGTGCTCCTCACCCTCT +
Preference number: 3 (lower is better)
Translates to: GRQRGLLKARASCFPSVCVLTMC*GCSSPS
Trigger: AGAGGGTGAGGAGCACCCCAAGCACATGGTCAGCAC...GCAGACAGAGGGAAAACAACTGGCTCTTGCCTTCAGGAGCCCTCGCTGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR GCA 72 bp TCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAGACTaGTGTCTAAAGCCGTTTCTTCCCTGTGCACCACAT +
Preference number: 3 (lower is better)
Translates to: SRHPATQVGPAD*CLKPFLPCAPH
Trigger: ATGTGGTGCACAGGGAAGAAACGGCTTTAGACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGATGCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR GCA 72 bp TGCTGGCAGGGAGGTTGGAGGGATTCTTGGAATTGGTaGCTTCAACCTCACTGGGGTAGGACGCCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: CWQGGWRDSWNW*LQPHWGRTPSG
Trigger: CCCACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTCCAACCTCCCTGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CAA 90 bp TTCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAGACTGCTGTCTAAAGCCGTTTTCCTCAGCTGTCAGTaGAGGCTAGTTGGGCCAGAT +
Preference number: 3 (lower is better)
Translates to: FSASCHPGGARRLLSKAVFLSCQ*RLVGPD
Trigger: ATCTGGCCCAACTAGCCTCAACTGACAGCTGAGGAA...AACGGCTTTAGACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CAA 90 bp ACGTGGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCCCCAGGCCTCCCTCAGGCTGCTAATCTaGCCTGGGACCAACCTGGAG +
Preference number: 3 (lower is better)
Translates to: TWPCGRRHETLVSEPQASLRLLI*PGTNLE
Trigger: CTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAG...GGAGGCCTGGGGCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR CAA 90 bp CTTTCTGTCCCCGACCTCTTCCCCCGAGGAGGGTGGAAACTTTCTCCGCCCTCCTCTGTACAAGGGATTTaGCCAGCAGTAGCTCAGCTC +
Preference number: 3 (lower is better)
Translates to: LSVPDLFPRGGWKLSPPSSVQGI*PAVAQL
Trigger: GAGCTGAGCTACTGCTGGCAAAATCCCTTGTACAGA...GGAGGGCGGAGAAAGTTTCCACCCTCCTCGGGGGAAGAGGTCGGGGACAGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR CCA 72 bp CCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTaGCCTGGGGGCCAGGAGACTGGGATTTCAAGCTCG +
Preference number: 3 (lower is better)
Translates to: PSRGRHSMVDRP*PGGQETGISSS
Trigger: CGAGCTTGAAATCCCAGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CCA 72 bp AAAGCCAGAACGACCCCAGTAGAGGAAGACATTCTATaGTGGACAGACCCTGGCCTGGGGGCCAGGAGACTG +
Preference number: 3 (lower is better)
Translates to: KARTTPVEEDIL*WTDPGLGARRL
Trigger: CAGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CCA 72 bp GAGTGCTGGCAGGGAGGTTGGAGGGATTCTTGGAATTaGTGCCTTCAACCTCACTGGGGTAGGACGCCCAGT +
Preference number: 3 (lower is better)
Translates to: ECWQGGWRDSWN*CLQPHWGRTPS
Trigger: ACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTCCAACCTCCCTGCCAGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR TCA 72 bp CTCTCATGTAAGGGGACATTCGAGCAGAGACCAGAGTaGGTCAAGGGGCGAGCCACGTGGCCATGTGGTAGA +
Preference number: 3 (lower is better)
Translates to: LSCKGTFEQRPE*VKGRATWPCGR
Trigger: TCTACCACATGGCCACGTGGCTCGCCCCTTGACTCACTCTGGTCTCTGCTCGAATGTCCCCTTACATGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR GCA 72 bp GCCCGCAGACTGCTGTCTAAAGCCGTTTCTTCCCTGTaGACCACATGTGGTCTCCCCTTTGCTAGGAAAGTG +
Preference number: 3 (lower is better)
Translates to: ARRLLSKAVSSL*TTCGLPFARKV
Trigger: CACTTTCCTAGCAAAGGGGAGACCACATGTGGTGCACAGGGAAGAAACGGCTTTAGACAGCAGTCTGCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CCA 72 bp TGTGGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCTaGGACCAACCTGGAGGTCAGACTCAGAGCTTTATT +
Preference number: 3 (lower is better)
Translates to: CGSRTPQAANLA*DQPGGQTQSFI
Trigger: AATAAAGCTCTGAGTCTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR CAA 90 bp CTTTCTGTCCCCGACCTCTTCCCCCGAGGAGGGTGGAAACTTTCTCCGCCCTCCGGGTCCGGTTTTCTATaGAACATGCTATTCATGCTA +
Preference number: 3 (lower is better)
Translates to: LSVPDLFPRGGWKLSPPSGSGFL*NMLFML
Trigger: TAGCATGAATAGCATGTTCAATAGAAAACCGGACCC...GGAGGGCGGAGAAAGTTTCCACCCTCCTCGGGGGAAGAGGTCGGGGACAGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR TCA 72 bp TGTGCACCACATGTGGTCTCCCCTTTGCTAGGAAAGTaGTCAACCCCTAAGCCAGGGTCCTGTTCAAACCCG +
Preference number: 3 (lower is better)
Translates to: CAPHVVSPLLGK*STPKPGSCSNP
Trigger: CGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATCACTTTCCTAGCAAAGGGGAGACCACATGTGGTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR TCA 72 bp CCCTCTGCCGTGTGGGGTATGGGTCCGGTTTTCTATTaGACATGCTATTCATGCTACCGTGTGGAAGCCGGA +
Preference number: 3 (lower is better)
Translates to: PSAVWGMGPVFY*TCYSCYRVEAG
Trigger: TCCGGCTTCCACACGGTAGCATGAATAGCATGTTCAATAGAAAACCGGACCCATACCCCACACGGCAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR CCA 72 bp AGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTaGGTGAGCACACAGGTTTGCATGCACCAAACTCAC +
Preference number: 3 (lower is better)
Translates to: RACVYTPLPHAL*VSTQVCMHQTH
Trigger: GTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR GCA 72 bp GTAATAATAACAGCCACCTGCCAGGTGCTGACCATGTaGTTGGGGTGCTCCTCACCCTCTGTTTCCTTCCAT +
Preference number: 3 (lower is better)
Translates to: VIITATCQVLTM*LGCSSPSVSFH
Trigger: ATGGAAGGAAACAGAGGGTGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGTTATTATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR GCA 72 bp AGCACTTTTGAGGAGTGGGTAATAATAACAGCCACCTaGCAGGTGCTGACCATGTGCTTGGGGTGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: STFEEWVIITAT*QVLTMCLGCSS
Trigger: TGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGTTATTATTACCCACTCCTCAAAAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR CAA 90 bp GGGGAAAGAGGGCTGTGTCTTTGCGTGTCAGGAAAGTGCATAGGGAGTGCTGAGGCCAGGAAAGTATGCTaGGTGACTAGGAGAAACAAA +
Preference number: 3 (lower is better)
Translates to: GERGLCLCVSGKCIGSAEARKVC*VTRRNK
Trigger: TTTGTTTCTCCTAGTCACCAAGCATACTTTCCTGGC...CTCAGCACTCCCTATGCACTTTCCTGACACGCAAAGACACAGCCCTCTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR TCA 72 bp CCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTaGGCACACAGGTTTGCATGCACCAAACTCACCTTA +
Preference number: 3 (lower is better)
Translates to: PVSTHHYPMLCG*AHRFACTKLTL
Trigger: TAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CCA 72 bp TCTGTGCTCAAGCCTAGCCCTCTGCCGTGTGGGGTATaGGTCCGGTTTTCTATTGAACATGCTATTCATGCT +
Preference number: 3 (lower is better)
Translates to: SVLKPSPLPCGV*VRFSIEHAIHA
Trigger: AGCATGAATAGCATGTTCAATAGAAAACCGGACCCATACCCCACACGGCAGAGGGCTAGGCTTGAGCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR CAA 90 bp GGGGAAAGAGGGCTGTGTCTTTGCGTGTCAGGAAAGTGCATAGGGAGTGCTGAGAAACTCAGGAAAGTATaGATGAAGGATGTTGGGTCC +
Preference number: 3 (lower is better)
Translates to: GERGLCLCVSGKCIGSAEKLRKV*MKDVGS
Trigger: GGACCCAACATCCTTCATCAATACTTTCCTGAGTTT...CTCAGCACTCCCTATGCACTTTCCTGACACGCAAAGACACAGCCCTCTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR TCA 72 bp TTGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAATaGGCAGTTCATGTAGAGAACATTAGGTCCCGAGGT +
Preference number: 3 (lower is better)
Translates to: LLYGRTSLLSSK*AVHVENIRSRG
Trigger: ACCTCGGGACCTAATGTTCTCTACATGAACTGCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR TCA 72 bp TTACATTTGGGGATATTACTGCAGGACCCTCCTCTCTaGCTTAGCTGGCAAGGCTTTGTGTTCACACAGCCT +
Preference number: 3 (lower is better)
Translates to: LHLGILLQDPPL*LSWQGFVFTQP
Trigger: AGGCTGTGTGAACACAAAGCCTTGCCAGCTAAGTCAGAGAGGAGGGTCCTGCAGTAATATCCCCAAATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR CCA 72 bp CCATGTGAAACCTTCTCTCCTAACACATTTGCTCTATaGCAGGACCTCACTGCTGTCCTCCAAATGAGCAGT +
Preference number: 3 (lower is better)
Translates to: PCETFSPNTFAL*QDLTAVLQMSS
Trigger: ACTGCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGAGAAGGTTTCACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CAA 90 bp GATGATCAAACTCAGGAAAGTATTGATGAAGGATGTTGGGTCCCATGTGAAACCGAGGGATTCTTGGAATaGGTGCCTTCAACCTCACTG +
Preference number: 3 (lower is better)
Translates to: DDQTQESIDEGCWVPCETEGFLE*VPSTSL
Trigger: CAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTC...GGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR-3UTR CAA 90 bp AGACAGCTGAACAAACAAATGGATGATATGTCTAGTGGAGATAAGTGCAAGGAAGAAGGCAAGAGCCAGTaGTTTTCCCTCTGTCTGCAG +
Preference number: 3 (lower is better)
Translates to: RQLNKQMDDMSSGDKCKEEGKSQ*FSLCLQ
Trigger: CTGCAGACAGAGGGAAAACAACTGGCTCTTGCCTTC...TTCCTTGCACTTATCTCCACTAGACATATCATCCATTTGTTTGTTCAGCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR CAA 90 bp AAAGTATGCTTGGTGACTAGGAGAAACAAACTGGTTCAGTTTCCAGTTTCAGAAAAGAGGGCTGTGTCTTaGCGTGTCAGGAAAGTGCAT +
Preference number: 3 (lower is better)
Translates to: KVCLVTRRNKLVQFPVSEKRAVS*RVRKVH
Trigger: ATGCACTTTCCTGACACGCAAAGACACAGCCCTCTT...TTCTGAAACTGGAAACTGAACCAGTTTGTTTCTCCTAGTCACCAAGCATACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR GCA 72 bp AGCAGTGAGCAAAACAAAGTCCCTGTAATCATGAGGTaGACACTTTGGATGGAAAGACAGCTGAACAAACAA +
Preference number: 3 (lower is better)
Translates to: SSEQNKVPVIMR*TLWMERQLNKQ
Trigger: TTGTTTGTTCAGCTGTCTTTCCATCCAAAGTGTGCACCTCATGATTACAGGGACTTTGTTTTGCTCACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR-3UTR CAA 90 bp AGACAGCTGAACAAACAAATGGATGATATGTCTAGTGGAGATAAGTGCAAGGAAGGGAGGGAATATTTGTaGACATCCACTCTGTACAAG +
Preference number: 3 (lower is better)
Translates to: RQLNKQMDDMSSGDKCKEGREYL*TSTLYK
Trigger: CTTGTACAGAGTGGATGTCAACAAATATTCCCTCCC...TTCCTTGCACTTATCTCCACTAGACATATCATCCATTTGTTTGTTCAGCTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR TCA 72 bp TTGAGCAAGATCAAATTAACTAATAATTGGCAGAGCTaGGATCTGATCCCAGCAGTGAGCAAAACAAAGTCC +
Preference number: 3 (lower is better)
Translates to: LSKIKLTNNWQS*DLIPAVSKTKS
Trigger: GGACTTTGTTTTGCTCACTGCTGGGATCAGATCTCAGCTCTGCCAATTATTAGTTAATTTGATCTTGCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR CCA 72 bp GATGATCAAACTCAGGAAAGTATTGATGAAGGATGTTaGGTCCCATGTGAAACCTTCTCTCCTAACACATTT +
Preference number: 3 (lower is better)
Translates to: DDQTQESIDEGC*VPCETFSPNTF
Trigger: AAATGTGTTAGGAGAGAAGGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR TCA 72 bp TGTGTTGCAGGTTTCAACGTACAAATTATAGTTTGCTaGTTAGATTTAAGGTGCTGTGATGTGAGGGTGAAC +
Preference number: 3 (lower is better)
Translates to: CVAGFNVQIIVC*LDLRCCDVRVN
Trigger: GTTCACCCTCACATCACAGCACCTTAAATCTAATCAGCAAACTATAATTTGTACGTTGAAACCTGCAACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp ACACGTCCAGGTCGAACTGGGGGCTGGCGCCGCCGTCCACCGGGGCCGGGCGGCCGCGCTGTACCTCGCTaGCGTCCTGGCACCGGTCAG +
Preference number: 4 (lower is better)
Translates to: TRPGRTGGWRRRPPGPGGRAVPR*RPGTGQ
Trigger: CTGACCGGTGCCAGGACGCCAGCGAGGTACAGCGCG...GCCGCCCGGCCCCGGTGGACGGCGGCGCCAGCCCCCAGTTCGACCTGGACGTGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp ACACGTCCAGGTCGAACTGGGGGCTGGCGCCGCCGTCCACCGGGGCCGGGCGGCGGAGCGCGTGCTTCATaGTGCGGGCATCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TRPGRTGGWRRRPPGPGGGARAS*CGHRSG
Trigger: CCCTGAGCGATGCCCGCAGCATGAAGCACGCGCTCC...GCCGCCCGGCCCCGGTGGACGGCGGCGCCAGCCCCCAGTTCGACCTGGACGTGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp AAGAGGCTGGCCGGCTCGTCCTCGCGCGCCCCCGTGTCCGCCAGCCCCGTGGCCATCCTGCCACCCAGGTaGGGCCCGCAGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: KRLAGSSSRAPVSASPVAILPPR*GPQTAV
Trigger: GACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGAT...GGCCACGGGGCTGGCGGACACGGGGGCGCGCGAGGACGAGCCGGCCAGCCTCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp AGTGGCGCCGAACCCGCGCGCGGGTCGCGCTGTACCTCGCTGGCGTCCTGGCACGAGAAGGCCTCGGTCTaGACGAGGTCGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SGAEPARGSRCTSLASWHEKASV*TRSPGC
Trigger: GCACCCTGGCGACCTCGTGCAGACCGAGGCCTTCTC...GTGCCAGGACGCCAGCGAGGTACAGCGCGACCCGCGCGCGGGTTCGGCGCCACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp TTGCGCGGGTCCACCTGCACGTCCTCAGCCAGTGGCGCCGAACCCGCGCGCGGGCTGCTCCAGCAGGCGTaGCAGGTCGGTCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: LRGSTCTSSASGAEPARGLLQQA*QVGLHV
Trigger: TACATGGAGACCGACCTGGCACGCCTGCTGGAGCAG...CCCGCGCGCGGGTTCGGCGCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR TCA 90 bp ACACGTCCAGGTCGAACTGGGGGCTGGCGCCGCCGTCCACCGGGGCCGGGCGGCCAGGGATCCCATCAATaGATTCTGGAGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: TRPGRTGGWRRRPPGPGGQGSHQ*ILEASR
Trigger: CCTGGATGCCTCCAGAATTCATTGATGGGATCCCTG...GCCGCCCGGCCCCGGTGGACGGCGGCGCCAGCCCCCAGTTCGACCTGGACGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp AGTGGCGCCGAACCCGCGCGCGGGTCGCGCTGTACCTCGCTGGCGTCCTGGCACCAGGCCAGGATCCTCTaGAGCCTTTGGATGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGAEPARGSRCTSLASWHQARIL*SLWMWA
Trigger: TGCCCACATCCAAAGGCTCCAGAGGATCCTGGCCTG...GTGCCAGGACGCCAGCGAGGTACAGCGCGACCCGCGCGCGGGTTCGGCGCCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CAA 72 bp GGCCTGGAGCGGCCCCTCCGCCCTCACCACCTTTCTTaGGAGAAGGCCTCGGTCTGCACGAGGTCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLERPLRPHHLS*EKASVCTRSPG
Trigger: CCCTGGCGACCTCGTGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGGGCGGAGGGGCCGCTCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp AGTGGCGCCGAACCCGCGCGCGGGTCGCGCTGTACCTCGCTGGCGTCCTGGCACTTGAACAGCTCACCCTaGAGGTCAGTGCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SGAEPARGSRCTSLASWHLNSSP*RSVPLG
Trigger: TCCCAAGGGCACTGACCTGCAGGGTGAGCTGTTCAA...GTGCCAGGACGCCAGCGAGGTACAGCGCGACCCGCGCGCGGGTTCGGCGCCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp ACACGTCCAGGTCGAACTGGGGGCTGGCGCCGCCGTCCACCGGGGCCGGGCGGCCACTATGAGGGGCATTaGTGCTTTGAGTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TRPGRTGGWRRRPPGPGGHYEGH*CFESLP
Trigger: AGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTG...GCCGCCCGGCCCCGGTGGACGGCGGCGCCAGCCCCCAGTTCGACCTGGACGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp AAGAGGCTGGCCGGCTCGTCCTCGCGCGCCCCCGTGTCCGCCAGCCCCGTGGCCGAGGCTGCAGGAATGTaGCATCTTTCAGACCAAGTC +
Preference number: 4 (lower is better)
Translates to: KRLAGSSSRAPVSASPVAEAAGM*HLSDQV
Trigger: GACTTGGTCTGAAAGATGCCACATTCCTGCAGCCTC...GGCCACGGGGCTGGCGGACACGGGGGCGCGCGAGGACGAGCCGGCCAGCCTCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp AAGAGGCTGGCCGGCTCGTCCTCGCGCGCCCCCGTGTCCGCCAGCCCCGTGGCCCCCATCAATGAATTCTaGAGGCATCCAGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KRLAGSSSRAPVSASPVAPINEF*RHPGAS
Trigger: AGAAGCCCCTGGATGCCTCCAGAATTCATTGATGGG...GGCCACGGGGCTGGCGGACACGGGGGCGCGCGAGGACGAGCCGGCCAGCCTCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp CGGAGCTACCTCTGCAAGATTTCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAACGTCCAGGTCGAACTaGGGGCTGGCGCCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RSYLCKISRHPATQVGPATSRSN*GLAPPS
Trigger: GGACGGCGGCGCCAGCCCCCAGTTCGACCTGGACGT...TGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp ACACGTCCAGGTCGAACTGGGGGCTGGCGCCGCCGTCCACCGGGGCCGGGCGGCCTGCTGTCCTCCAAATaGGCAGTTCATGTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: TRPGRTGGWRRRPPGPGGLLSSK*AVHVEN
Trigger: GTTCTCTACATGAACTGCTCATTTGGAGGACAGCAG...GCCGCCCGGCCCCGGTGGACGGCGGCGCCAGCCCCCAGTTCGACCTGGACGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp CGCGCCACAGCAGCTTGTCCAGGTAGGACGGCGACCCCACCTTGTAGTCGCAGGTTGCGCGGGTCCACCTaGACGTCCTCAGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RATAACPGRTATPPCSRRLRGST*TSSASG
Trigger: GCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAA...CCTGCGACTACAAGGTGGGGTCGCCGTCCTACCTGGACAAGCTGCTGTGGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp CTTGTAGTCGCAGGAGCGCCCGTAGTCGGCCTCGAAGGCGCGCTCCATGGACGAGGAAGCGCTCGGAGCTaGTGTGCGAGTCCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: LVVAGAPVVGLEGALHGRGSARS*CASPCA
Trigger: CGCGCAAGGACTCGCACAGCAGCTCCGAGCGCTTCC...TCGTCCATGGAGCGCGCCTTCGAGGCCGACTACGGGCGCTCCTGCGACTACAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp TCGAAGGCGCGCTCCATGGACGAGTGCGACTGCTCTAGGAAGCGCTCGGAGCTGGGTCCTCGGGCTTGGTaGAGAGCTTCAGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: SKARSMDECDCSRKRSELGPRAW*RASGRG
Trigger: CCCGCGCCCTGAAGCTCTGCACCAAGCCCGAGGACC...CAGCTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp AAGAGGCTGGCCGGCTCGTCCTCGCGCGCCCCCGTGTCCGCCAGCCCCGTGGCCCTTTGGTGTAGTTATTaGGGGAAAGGAGCAGTCGTG +
Preference number: 4 (lower is better)
Translates to: KRLAGSSSRAPVSASPVALWCSY*GKGAVV
Trigger: CACGACTGCTCCTTTCCCCCAATAACTACACCAAAG...GGCCACGGGGCTGGCGGACACGGGGGCGCGCGAGGACGAGCCGGCCAGCCTCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp CGGAGCTACCTCTGCAAGATTTCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAGCTCTTCTGCCAGCGTaGCCTGCTCCAGCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: RSYLCKISRHPATQVGPAALLPA*PAPAGV
Trigger: CACGCCTGCTGGAGCAGGGCACGCTGGCAGAAGAGC...TGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGCACGTCCTCAGCCAGTaGCGCCGAACCCGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: FLSLLGSFTCSANPKAAEHVLSQ*RRTRAR
Trigger: CCGCGCGCGGGTTCGGCGCCACTGGCTGAGGACGTG...CTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp CTGTCAGTGTCCCCACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTCTGCTCTGTGGGGCCTaGAGCGGCCCCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LSVSPPHASAEGLCLHTILLCGA*SGPSAL
Trigger: GAGGGCGGAGGGGCCGCTCCAGGCCCCACAGAGCAG...AATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGTGGGGACACTGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGGCGGAAGGGGTGTTGTaGGGTGGGCTCGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LAPRILHVFCQPQGSREGAEGVL*GGLVLR
Trigger: CCTGAGGACGAGCCCACCTCACAACACCCCTTCCGC...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR TCA 90 bp GCTTGTCCAGGTAGGACGGCGACCCCACCTTGTAGTCGCAGGAGCGCCCGTAGTCCGACCATGCAGGGGTaGGGCAAATACAGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: ACPGRTATPPCSRRSARSPTMQG*GKYRGA
Trigger: CGCACCCCTGTATTTGCCTCACCCCTGCATGGTCGG...ACTACGGGCGCTCCTGCGACTACAAGGTGGGGTCGCCGTCCTACCTGGACAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGGCGCGCCGGCCGCCTaGTTCCAGTGCGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRGAPAA*FQCDRS
Trigger: GGACCTGTCGCACTGGAAGCAGGCGGCCGGCGCGCC...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGGAGAAGGCCTCGGTCTaGACGAGGTCGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LAPRILHVFCQPQGSREGEKASV*TRSPGC
Trigger: GCACCCTGGCGACCTCGTGCAGACCGAGGCCTTCTC...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp TTGAGGTCGCCCAGTTTATTGTCCGGCAGGTCCTCGGGCTTGGTGCAGAGCTTCAGGGCGGCCGCCTCCTaGCAGCCCCGGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LRSPSLLSGRSSGLVQSFRAAAS*QPRLSL
Trigger: CAGAGAAAGCCGGGGCTGGCAGGAGGCGGCCGCCCT...GAAGCTCTGCACCAAGCCCGAGGACCTGCCGGACAATAAACTGGGCGACCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCACGTCCAGGTCGAACTaGGGGCTGGCGCCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSTSRSN*GLAPPS
Trigger: GGACGGCGGCGCCAGCCCCCAGTTCGACCTGGACGT...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp CTGTCAGTGTCCCCACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTGGGTCTCCTGCTCTGTaGGGCCTGGAGCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LSVSPPHASAEGLCLHTIGSPAL*GLERPL
Trigger: GAGGGGCCGCTCCAGGCCCCACAGAGCAGGAGACCC...AATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGTGGGGACACTGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TTCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAGACTGCTGTCTAAAGCCGTTGGACAGACCCTGGCCTaGGGGCCAGGAGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: FSASCHPGGARRLLSKAVGQTLA*GPGDWD
Trigger: ATCCCAGTCTCCTGGCCCCCAGGCCAGGGTCTGTCC...AACGGCTTTAGACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CCGCGCGCGGGTCGCGCTGTACCTCGCTGGCGTCCTGGCACCGGTCAGGCCGCCTTATATATGAACTCCTaGTCAAGGCCAGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PRAGRAVPRWRPGTGQAALYMNS*SRPAAC
Trigger: ACAAGCTGCTGGCCTTGACCAGGAGTTCATATATAA...GGCGGCCTGACCGGTGCCAGGACGCCAGCGAGGTACAGCGCGACCCGCGCGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTGGCGCGCCGGCCGCCTaGTTCCAGTGCGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKAGAPAA*FQCDRS
Trigger: GGACCTGTCGCACTGGAAGCAGGCGGCCGGCGCGCC...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAAGGGCGGCCGCCTCCTaGCAGCCCCGGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAARAAAS*QPRLSL
Trigger: CAGAGAAAGCCGGGGCTGGCAGGAGGCGGCCGCCCT...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp CGCGCCACAGCAGCTTGTCCAGGTAGGACGGCGACCCCACCTTGTAGTCGCAGGAGGTCTCCATGCTGGTaGCTGACCCCTAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RATAACPGRTATPPCSRRRSPCW*LTPKSP
Trigger: AGGGCTCTTAGGGGTCAGGCACCAGCATGGAGACCT...CCTGCGACTACAAGGTGGGGTCGCCGTCCTACCTGGACAAGCTGCTGTGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp CTTGTAGTCGCAGGAGCGCCCGTAGTCGGCCTCGAAGGCGCGCTCCATGGACGACCGAAGCCCAGGGGTTaGAAGTCAACAAAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: LVVAGAPVVGLEGALHGRPKPRG*KSTKRP
Trigger: TGGGCGCTTTGTTGACTTCCAACCCCTGGGCTTCGG...TCGTCCATGGAGCGCGCCTTCGAGGCCGACTACGGGCGCTCCTGCGACTACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp ACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTACCTCGCTGGCGTCCTaGCACCGGTCAGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: TPRFCRGPVSTHHYPMLCTSLAS*HRSGRH
Trigger: GTGGCGGCCTGACCGGTGCCAGGACGCCAGCGAGGT...ACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGCGCGCTGTACCTCGCTaGCGTCCTGGCACCGGTCAG +
Preference number: 4 (lower is better)
Translates to: PHASAEGLCLHTITPCSVRAVPR*RPGTGQ
Trigger: CTGACCGGTGCCAGGACGCCAGCGAGGTACAGCGCG...CACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCACGGGCTGGCGTGCTCTaGGCCGCCCTGCGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAARAGVL*AALRAL
Trigger: AAGAGCACGCAGGGCGGCCCAGAGCACGCCAGCCCG...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGGGTCTCCTGCTCTGTaGGGCCTGGAGCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAAGSPAL*GLERPL
Trigger: GAGGGGCCGCTCCAGGCCCCACAGAGCAGGAGACCC...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR TCA 90 bp TCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGACGCCCTGCGTGCTCTTaGCCCACTGCGCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: SSRSSDPSRVLPTPRQQRRPACS*PTARSP
Trigger: TGGAGATCGCGCAGTGGGTCAAGAGCACGCAGGGCG...TCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp TTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGGCAGGGGAGCTCAGCTaGCAGGCCAGGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FLSLLGSFTCSANPKAAEAGELS*QARILW
Trigger: CCAGAGGATCCTGGCCTGGCAGCTGAGCTCCCCTGC...CTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGAAGCGCTCGGAGCTaGTGTGCGAGTCCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: PHASAEGLCLHTITPCSVGSARS*CASPCA
Trigger: CGCGCAAGGACTCGCACAGCAGCTCCGAGCGCTTCC...CACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGCGCTCCATGGACGAGTaGGACTGCTCTAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LAPRILHVFCQPQGSREGRSMDE*DCSRKR
Trigger: GCGCTTCCTAGAGCAGTCGCACTCGTCCATGGAGCG...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp AGTGATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGGCGCGCCGGCCGCCTaGTTCCAGTGCGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: SDQPLSQGPVQTRSHRLKGAPAA*FQCDRS
Trigger: GGACCTGTCGCACTGGAAGCAGGCGGCCGGCGCGCC...CTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp CCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGTGCTCTGGGCCGCCCTaGGTGCTCTTGACCCACTGC +
Preference number: 4 (lower is better)
Translates to: PHASAEGLCLHTITPCSVCSGPP*VLLTHC
Trigger: GCAGTGGGTCAAGAGCACGCAGGGCGGCCCAGAGCA...CACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGGTCCTCGGGCTTGGTaGAGAGCTTCAGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAAGPRAW*RASGRG
Trigger: CCCGCGCCCTGAAGCTCTGCACCAAGCCCGAGGACC...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp TTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGTCTCTGGGGGTCTCCTaGTCTGTGGGGCCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: FLSLLGSFTCSANPKAAESLGVS*SVGPGA
Trigger: CGCTCCAGGCCCCACAGAGCAGGAGACCCCCAGAGA...CTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp CGGCCCCTCCGCCCTCACCACCTTTCTTTGGAGAAGGCCTCGGTCTGCACGAGGGTCTCCATGTACTCCTaGACGATGTACGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: RPLRPHHLSLEKASVCTRVSMYS*TMYATL
Trigger: CAGCGTGGCGTACATCGTCCAGGAGTACATGGAGAC...CCTCGTGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGGGCGGAGGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGACGCGCTGTACCTCGCTaGCGTCCTGGCACCGGTCAG +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRRAVPR*RPGTGQ
Trigger: CTGACCGGTGCCAGGACGCCAGCGAGGTACAGCGCG...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp TGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCAGTGGGGAAAGAGGGGCAGGTCCTCGGGCTTaGTGCAGAGCTTCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: WNWCLQPHWGRTPSGERGAGPRA*CRASGR
Trigger: GCGCCCTGAAGCTCTGCACCAAGCCCGAGGACCTGC...CCCTCTTTCCCCACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCGCAGGTCCTCGGGCTTaGTGCAGAGCTTCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSAGPRA*CRASGR
Trigger: GCGCCCTGAAGCTCTGCACCAAGCCCGAGGACCTGC...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp AGTGATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGCTGCTCTGTGGGGCCTaGAGCGGCCCCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SDQPLSQGPVQTRSHRLKLLCGA*SGPSAL
Trigger: GAGGGCGGAGGGGCCGCTCCAGGCCCCACAGAGCAG...CTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp CGGCCCCTCCGCCCTCACCACCTTTCTTTGGAGAAGGCCTCGGTCTGCACGAGGATGAGGTCTCCATGCTaGTGCCTGACCCCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: RPLRPHHLSLEKASVCTRMRSPC*CLTPKS
Trigger: GCTCTTAGGGGTCAGGCACCAGCATGGAGACCTCAT...CCTCGTGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGGGCGGAGGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp AAGAGGCTGGCCGGCTCGTCCTCGCGCGCCCCCGTGTCCGCCAGCCCCGTGGCCATGGCACATGAGGAGTaGTGTACATTTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KRLAGSSSRAPVSASPVAMAHEE*CTFLFL
Trigger: AAGAAAAAGAAATGTACACCACTCCTCATGTGCCAT...GGCCACGGGGCTGGCGGACACGGGGGCGCGCGAGGACGAGCCGGCCAGCCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592595.5
3UTR CAA 72 bp AGGTCGCCCAGTTTATTGTCCGGCAGGTCCTCGGGCTaGGTGCAGAGCTTCAGGGCGCGGGAGATGAACACG +
Preference number: 4 (lower is better)
Translates to: RSPSLLSGRSSG*VQSFRAREMNT
Trigger: CGTGTTCATCTCCCGCGCCCTGAAGCTCTGCACCAAGCCCGAGGACCTGCCGGACAATAAACTGGGCGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR TCA 90 bp TTCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAGACTGCTGTCTAAAGCCGTTCCCATGCTCTGTGGGTaGGCACACAGGTTTGCATGC +
Preference number: 4 (lower is better)
Translates to: FSASCHPGGARRLLSKAVPMLCG*AHRFAC
Trigger: GCATGCAAACCTGTGTGCTCACCCACAGAGCATGGG...AACGGCTTTAGACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TCGAAGGCGCGCTCCATGGACGAGTGCGACTGCTCTAGGAAGCGCTCGGAGCTGTCAGTGATCTGGAGCTaGCCAGGTAACACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SKARSMDECDCSRKRSELSVIWS*PGNTGA
Trigger: TGCCCCTGTGTTACCTGGGCAGCTCCAGATCACTGA...CAGCTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTTCTGCCAGCGTGCCCTaGTCCAGCAGGCGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPSASVP*SSRRAR
Trigger: CCTGGCACGCCTGCTGGAGCAGGGCACGCTGGCAGA...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGATTGCGCGGGTCCACCTaGACGTCCTCAGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRLRGST*TSSASG
Trigger: GCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAA...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp GGGGAAAGAGGGCTGTGTCTTTGCGTGTCAGGAAAGTGCATAGGGAGTGCTGAGCGCTCGGAGCTGCTGTaGGAGTCCTTGCGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: GERGLCLCVSGKCIGSAERSELL*ESLRGS
Trigger: GGACCCGCGCAAGGACTCGCACAGCAGCTCCGAGCG...CTCAGCACTCCCTATGCACTTTCCTGACACGCAAAGACACAGCCCTCTTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCACACAACGAGGTCGCCAGGGTaGTCGGGGATGCACGCACCA +
Preference number: 4 (lower is better)
Translates to: AEGLCLHTITPCSVGEHTTRSPG*SGMHAP
Trigger: TGGTGCGTGCATCCCCGAGCACCCTGGCGACCTCGT...TGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAACGAGGTCGCCAGGGTaGTCGGGGATGCACGCACCA +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRTRSPG*SGMHAP
Trigger: TGGTGCGTGCATCCCCGAGCACCCTGGCGACCTCGT...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGACGAGGTCGCCAGGGTaGTCGGGGATGCACGCACCA +
Preference number: 4 (lower is better)
Translates to: ASAEGLCLHTITPCSVGETRSPG*SGMHAP
Trigger: TGGTGCGTGCATCCCCGAGCACCCTGGCGACCTCGT...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGGCCGTTTCTTCCCTGTaGACCACATGTGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LAPRILHVFCQPQGSREGAVSSL*TTCGLP
Trigger: GGGGAGACCACATGTGGTGCACAGGGAAGAAACGGC...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CGGCCCCTCCGCCCTCACCACCTTTCTTTGGAGAAGGCCTCGGTCTGCACGAGGCACACCATTACCCCATaGTCTGTGGGTGAGCACACA +
Preference number: 4 (lower is better)
Translates to: RPLRPHHLSLEKASVCTRHTITP*SVGEHT
Trigger: TGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTG...CCTCGTGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGGGCGGAGGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp GGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCTGGGACCAACCTGGAGGTCAGCCGAAGCCCAGGGGTTaGAAGTCAACAAAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: GSRTPQAANLAWDQPGGQPKPRG*KSTKRP
Trigger: TGGGCGCTTTGTTGACTTCCAACCCCTGGGCTTCGG...CTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGTTGGACAGCTGGCTCTaGTTAGCGGCCATCAGCACG +
Preference number: 4 (lower is better)
Translates to: LAPRILHVFCQPQGSREGLDSWL*LAAIST
Trigger: CGTGCTGATGGCCGCTAACCAGAGCCAGCTGTCCAA...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CCA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGTCCCAGTTGGACAGCTaGCTCTGGTTAGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: LAPRILHVFCQPQGSREGSQLDS*LWLAAI
Trigger: GATGGCCGCTAACCAGAGCCAGCTGTCCAACTGGGA...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTTCTCCAGGAAGAGGCTaGCCGGCTCGTCCTCGCGCG +
Preference number: 4 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKASPGRG*PARPRA
Trigger: CGCGCGAGGACGAGCCGGCCAGCCTCTTCCTGGAGA...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCACGGGCTGGCGTGCTCTaGGCCGCCCTGCGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPRAGVL*AALRAL
Trigger: AAGAGCACGCAGGGCGGCCCAGAGCACGCCAGCCCG...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAACGTCCAGGTCGAACTaGGGGCTGGCGCCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPTSRSN*GLAPPS
Trigger: GGACGGCGGCGCCAGCCCCCAGTTCGACCTGGACGT...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp AGTGATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGGGTCTCCTGCTCTGTaGGGCCTGGAGCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SDQPLSQGPVQTRSHRLKGSPAL*GLERPL
Trigger: GAGGGGCCGCTCCAGGCCCCACAGAGCAGGAGACCC...CTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp TTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGCCCCGGCTTTCTCTaGGGGTCTCCTGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: FLSLLGSFTCSANPKAAESPGFL*GSPALW
Trigger: CCACAGAGCAGGAGACCCCCAGAGAAAGCCGGGGCT...CTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGCCCCGGCTTTCTCTaGGGGTCTCCTGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSSPGFL*GSPALW
Trigger: CCACAGAGCAGGAGACCCCCAGAGAAAGCCGGGGCT...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR TCA 90 bp GGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCTGGGACCAACCTGGAGGTCAGACAGCACCAAACCATTaGCACCGAAGCCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GSRTPQAANLAWDQPGGQTAPNH*HRSPGV
Trigger: AACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGT...CTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp CGGAGCTACCTCTGCAAGATTTCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAGCACCTCGTACACTTTaGCGATGTTGTCGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RSYLCKISRHPATQVGPAAPRTL*RCCRGP
Trigger: TGGACCACGACAACATCGTCAAAGTGTACGAGGTGC...TGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGCCTCCCAGGTGCTGCTaGCAAAGGAAGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: FLSLLGSFTCSANPKAAEPPRCC*QRKASP
Trigger: GGGTGATGCCTTCCTTTGTCAGCAGCACCTGGGAGG...CTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR GCA 90 bp TGCTCAAGCCTAGCCCTCTGCCGTGTGGGGTATGGGTCCGGTTTTCTATTGAACGCAGGGGAGCTCAGCTaGCAGGCCAGGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CSSLALCRVGYGSGFLLNAGELS*QARILW
Trigger: CCAGAGGATCCTGGCCTGGCAGCTGAGCTCCCCTGC...GTTCAATAGAAAACCGGACCCATACCCCACACGGCAGAGGGCTAGGCTTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp TGCTCAAGCCTAGCCCTCTGCCGTGTGGGGTATGGGTCCGGTTTTCTATTGAACGGAGCGCGTGCTTCATaGTGCGGGCATCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: CSSLALCRVGYGSGFLLNGARAS*CGHRSG
Trigger: CCCTGAGCGATGCCCGCAGCATGAAGCACGCGCTCC...GTTCAATAGAAAACCGGACCCATACCCCACACGGCAGAGGGCTAGGCTTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp CCTCTTCCCCCGAGGAGGGTGGAAACTTTCTCCGCCCTCCTAGCAAACTTTTCTGCTCTTCTGCCAGCGTaGCCTGCTCCAGCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: PLPPRRVETFSALLANFSALLPA*PAPAGV
Trigger: CACGCCTGCTGGAGCAGGGCACGCTGGCAGAAGAGC...AGAAAAGTTTGCTAGGAGGGCGGAGAAAGTTTCCACCCTCCTCGGGGGAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGCATCTCAGCCAGGATaGAGCCGGCGGCCCACATGT +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAAASQPG*SRRPTC
Trigger: ACATGTGGGCCGCCGGCTGCATCCTGGCTGAGATGC...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp AAAGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCGCTCGGAGCTGCTGTaGGAGTCCTTGCGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: KARTTPVEEDILWWTDPGRSELL*ESLRGS
Trigger: GGACCCGCGCAAGGACTCGCACAGCAGCTCCGAGCG...GCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCCGCTCCATGGACGAGTaGGACTGCTCTAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSRSMDE*DCSRKR
Trigger: GCGCTTCCTAGAGCAGTCGCACTCGTCCATGGAGCG...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAGGTCCTCGGGCTTGGTaGAGAGCTTCAGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPGPRAW*RASGRG
Trigger: CCCGCGCCCTGAAGCTCTGCACCAAGCCCGAGGACC...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTTCTCTGGGGGTCTCCTaGTCTGTGGGGCCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKASLGVS*SVGPGA
Trigger: CGCTCCAGGCCCCACAGAGCAGGAGACCCCCAGAGA...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp CGGCCCCTCCGCCCTCACCACCTTTCTTTGGAGAAGGCCTCGGTCTGCACGAGGCTCTCTGGGCCTAATTaGCTTTCCTCAGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RPLRPHHLSLEKASVCTRLSGPN*LSSAVS
Trigger: ACTGACAGCTGAGGAAAGGCAATTAGGCCCAGAGAG...CCTCGTGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGGGCGGAGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp AATAACAGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGTGCTCCTCACCCTCCTGAGCTGTGCTAGTTaGGGGCGCAGGCTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: NNSHLPGADHVLGVLLTLLSCAS*GRRLSS
Trigger: AGACGACAGCCTGCGCCCCCAACTAGCACAGCTCAG...GAGGGTGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGTTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp TTGAGGTCGCCCAGTTTATTGTCCGGCAGGTCCTCGGGCTTGGTGCAGAGCTTCGCAGGTCAGTGCCCTTaGGACCGAGCACCTCGTACA +
Preference number: 4 (lower is better)
Translates to: LRSPSLLSGRSSGLVQSFAGQCP*DRAPRT
Trigger: TGTACGAGGTGCTCGGTCCCAAGGGCACTGACCTGC...GAAGCTCTGCACCAAGCCCGAGGACCTGCCGGACAATAAACTGGGCGACCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp CCATTACCCCATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACTCTCCAGGAAGAGGCTaGCCGGCTCGTCCTCGCGCG +
Preference number: 4 (lower is better)
Translates to: PLPHALWVSTQVCMHQTHSPGRG*PARPRA
Trigger: CGCGCGAGGACGAGCCGGCCAGCCTCTTCCTGGAGA...GTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCTGCTCTGTGGGGCCTaGAGCGGCCCCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTLLCGA*SGPSAL
Trigger: GAGGGCGGAGGGGCCGCTCCAGGCCCCACAGAGCAG...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGAGCCCCGGCTTTCTCTaGGGGTCTCCTGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ASAEGLCLHTITPCSVGESPGFL*GSPALW
Trigger: CCACAGAGCAGGAGACCCCCAGAGAAAGCCGGGGCT...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAATGGTGGACAGACCCTaGCCTGGGGGCCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAAMVDRP*PGGQET
Trigger: AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCAT...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGGGGGCCAGGAGACTATGGTGGACAGACCCTaGCCTGGGGGCCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: SRGRHSMVDRPWPGGQETMVDRP*PGGQET
Trigger: AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCAT...AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GCTTGTCCAGGTAGGACGGCGACCCCACCTTGTAGTCGCAGGAGCGCCCGTAGTTGCTGGCAGGGAGGTTaGAGGGATTCTTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: ACPGRTATPPCSRRSARSCWQGG*RDSWNW
Trigger: CCAATTCCAAGAATCCCTCCAACCTCCCTGCCAGCA...ACTACGGGCGCTCCTGCGACTACAAGGTGGGGTCGCCGTCCTACCTGGACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp GACCAACCTGGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCGGCGCCTCTGTCGGGTaGCGAGGGGAGAGGACGCTG +
Preference number: 4 (lower is better)
Translates to: DQPGGQTQSFISPLYTSTGASVG*RGERTL
Trigger: CAGCGTCCTCTCCCCTCGCCACCCGACAGAGGCGCC...GGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCCAGGTTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp AGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGTGCTCCTCACCCTCTGTTTCCCCACCCCACAGGACTaGAACTCTCCCCAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: SHLPGADHVLGVLLTLCFPTPQD*NSPQFD
Trigger: GTCAAACTGGGGAGAGTTCCAGTCCTGTGGGGTGGG...GAAACAGAGGGTGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp GGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCTGGGACCAACCTGGAGGTCAGGATGCTCTCCCAGGATaGCTGCTGTCATTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GSRTPQAANLAWDQPGGQDALPG*LLSLSL
Trigger: CAGGGACAATGACAGCAGCCATCCTGGGAGAGCATC...CTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp GGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCTGGGACCAACCTGGAGGTCAGTGCCTGGGACCAACCTaGAGGTCAGACTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GSRTPQAANLAWDQPGGQCLGPT*RSDSEL
Trigger: AAGCTCTGAGTCTGACCTCCAGGTTGGTCCCAGGCA...CTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR CAA 72 bp TACCGTGTGGAAGCCGGACCCCTCAGGCTGCTAATCTaGCCTGGGACCAACCTGGAGGTCAGACTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: YRVEAGPLRLLI*PGTNLEVRLRA
Trigger: AGCTCTGAGTCTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCCACACGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp AGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGGGGGCCAGGAGACTGCGACAGGTCCAGGATaGGCTTGGGCTCCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SRGRHSMVDRPWPGGQETATGPG*AWAPSS
Trigger: ACTACTCGGAGCCCAAGCTCATCCTGGACCTGTCGC...AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGTCAGGGCGCGGGAGATaGACACGTCCAGGTCGAACT +
Preference number: 4 (lower is better)
Translates to: ASAEGLCLHTITPCSVGESGRGR*TRPGRT
Trigger: AGTTCGACCTGGACGTGTTCATCTCCCGCGCCCTGA...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TTCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAGACTGCTGTCTAAAGCCGTTCCTTTGCTAGGAAAGTaGTCAACCCCTAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FSASCHPGGARRLLSKAVPLLGK*STPKPG
Trigger: CCCTGGCTTAGGGGTTGATCACTTTCCTAGCAAAGG...AACGGCTTTAGACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCACTCCATGCTGGTGCCTaGCCCCTAAGAGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAALHAGA*PLRALA
Trigger: AGCAAGGGCTCTTAGGGGTCAGGCACCAGCATGGAG...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGACCCATGCTCTGTGGGTaGGCACACAGGTTTGCATGC +
Preference number: 4 (lower is better)
Translates to: SSRSSDPSRVLPTPRQQRPMLCG*AHRFAC
Trigger: GCATGCAAACCTGTGTGCTCACCCACAGAGCATGGG...TCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGGGGGCCAGGAGACTATCTCTCGGAGCGCGTaGTTCATGCTGCGGGCATCG +
Preference number: 4 (lower is better)
Translates to: SRGRHSMVDRPWPGGQETISRSA*FMLRAS
Trigger: CGATGCCCGCAGCATGAAGCACGCGCTCCGAGAGAT...AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTGCATCTCAGCCAGGATaGAGCCGGCGGCCCACATGT +
Preference number: 4 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKAASQPG*SRRPTC
Trigger: ACATGTGGGCCGCCGGCTGCATCCTGGCTGAGATGC...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCACGCTCCATGGACGAGTaGGACTGCTCTAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAARSMDE*DCSRKR
Trigger: GCGCTTCCTAGAGCAGTCGCACTCGTCCATGGAGCG...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp CTAGTTGGGCCAGATGGTTTCGGAGCTACCTCTGCAAGATTTCTCGGCATCCTGGAGAAGGCCTCGGTCTaGACGAGGTCGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LVGPDGFGATSARFLGILEKASV*TRSPGC
Trigger: GCACCCTGGCGACCTCGTGCAGACCGAGGCCTTCTC...CAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCGAAACCATCTGGCCCAACTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AAAGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCTCTCTGGGGGTCTCCTaGTCTGTGGGGCCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: KARTTPVEEDILWWTDPGSLGVS*SVGPGA
Trigger: CGCTCCAGGCCCCACAGAGCAGGAGACCCCCAGAGA...GCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGATCCTTCACGTGTTCTaGCAACCCCAAGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LAPRILHVFCQPQGSREGILHVF*QPQGSR
Trigger: TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGAT...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGACCCACCCCACGCTTCTaGAGAGGGCCTGTGTCTACA +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRPTPRF*RGPVST
Trigger: TGTAGACACAGGCCCTCTGCAGAAGCGTGGGGTGGG...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GCTTGTCCAGGTAGGACGGCGACCCCACCTTGTAGTCGCAGGAGCGCCCGTAGTGACGAGAATGGCATATaGTCATGCTCGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ACPGRTATPPCSRRSARSDENGI*SCSLSC
Trigger: ACAGCTCAGCGAGCATGACCATATGCCATTCTCGTC...ACTACGGGCGCTCCTGCGACTACAAGGTGGGGTCGCCGTCCTACCTGGACAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp TTCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAGACTGCTGTCTAAAGCCGTTCTGCCACCAGCTCTCTaGAGACGAGAATGGCATATG +
Preference number: 4 (lower is better)
Translates to: FSASCHPGGARRLLSKAVLPPAL*RREWHM
Trigger: CATATGCCATTCTCGTCTCCAGAGAGCTGGTGGCAG...AACGGCTTTAGACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CTTTCTGTCCCCGACCTCTTCCCCCGAGGAGGGTGGAAACTTTCTCCGCCCTCCTTGACGATGTTGTCGTaGTCCAGGCGCCGAATGATC +
Preference number: 4 (lower is better)
Translates to: LSVPDLFPRGGWKLSPPSLTMLS*SRRRMI
Trigger: GATCATTCGGCGCCTGGACCACGACAACATCGTCAA...GGAGGGCGGAGAAAGTTTCCACCCTCCTCGGGGGAAGAGGTCGGGGACAGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp ACGTGGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCCCCAGGCCTCCAGCCCGCGGAGCAGCTaGTACATGAACAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: TWPCGRRHETLVSEPQASSPRSS*YMNSLA
Trigger: TGCCAAGCTGTTCATGTACCAGCTGCTCCGCGGGCT...GGAGGCCTGGGGCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp TCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGCTCACAGGGTACCTaGAACTGCACGTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SSRSSDPSRVLPTPRQQRGSQGT*NCTCPS
Trigger: ACTGGGACACGTGCAGTTCCAGGTACCCTGTGAGCC...TCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCACCTCGCTGGCGTCCTaGCACCGGTCAGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSATSLAS*HRSGRH
Trigger: GTGGCGGCCTGACCGGTGCCAGGACGCCAGCGAGGT...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp AAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTTGAGTCCCTTCCTTCACGTCCTCAGCCAGTaGCGCCGAACCCGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: KLTLAYTMRGIAALSPFLHVLSQ*RRTRAR
Trigger: CCGCGCGCGGGTTCGGCGCCACTGGCTGAGGACGTG...AAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCACGAAGGCGCGCTCCATaGACGAGTGCGACTGCTCTA +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAARRRAP*TSATAL
Trigger: TAGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTCG...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAGGACAGACCCTGGCCTaGGGGCCAGGAGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPGQTLA*GPGDWD
Trigger: ATCCCAGTCTCCTGGCCCCCAGGCCAGGGTCTGTCC...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGATGCCTTCAACCTCACTaGGGTAGGACGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRCLQPH*GRTPSG
Trigger: CCCACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCA...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TTGCGCGGGTCCACCTGCACGTCCTCAGCCAGTGGCGCCGAACCCGCGCGCGGGTTTGTCAAGGCTAAATaGATGATCAAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LRGSTCTSSASGAEPARGFVKAK*MIKLRK
Trigger: TTTCCTGAGTTTGATCATCCATTTAGCCTTGACAAA...CCCGCGCGCGGGTTCGGCGCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp GGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCCCCAGGCCTCCCCTTATTCATGCTACCGTGTaGAAGCCGGACCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GHVVEDMRRWSLSPRPPLIHATV*KPDPSG
Trigger: GCCTGAGGGGTCCGGCTTCCACACGGTAGCATGAAT...AAGGGGAGGCCTGGGGCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp GGGAGGCAGCGAGGGCTCCTGAAGGCAAGAGCCAGTTGTTTTCCCTCTGTCTGCAAGGGGCGAGCCACGTaGCCATGTGGTAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: GRQRGLLKARASCFPSVCKGRAT*PCGRRH
Trigger: ATGTCTTCTACCACATGGCCACGTGGCTCGCCCCTT...GCAGACAGAGGGAAAACAACTGGCTCTTGCCTTCAGGAGCCCTCGCTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp CCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGCGAAATCCCCAATCTTaGGCACGAGGTCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PHASAEGLCLHTITPCSVRNPQS*ARGPLC
Trigger: GCACAGAGGACCTCGTGCTCAAGATTGGGGATTTCG...CACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCAGTGGGGAAAGAGGGCGAAATCCCCAATCTTaGGCACGAGGTCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: WNWCLQPHWGRTPSGERGRNPQS*ARGPLC
Trigger: GCACAGAGGACCTCGTGCTCAAGATTGGGGATTTCG...CCCTCTTTCCCCACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp CATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACCTTAGCCTAGCGGAAGGGGTGTTGTaGGGTGGGCTCGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: HALWVSTQVCMHQTHLSLAEGVL*GGLVLR
Trigger: CCTGAGGACGAGCCCACCTCACAACACCCCTTCCGC...TAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS-3UTR TCA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGCAGGCTGTTCTGACCTaGAACGAAGATTTCCGACCA +
Preference number: 4 (lower is better)
Translates to: LAPRILHVFCQPQGSREGQAVLT*NEDFRP
Trigger: TGGTCGGAAATCTTCGTTTCAGGTCAGAACAGCCTG...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCTCCCTTCCTTTGTCATaGGGTCTCCATGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSSLPLS*GLHAGA
Trigger: GGCACCAGCATGGAGACCTCATGACAAAGGAAGGGA...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCTCAGTGATCTGGAGCTaGCCAGGTAACACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSSVIWS*PGNTGA
Trigger: TGCCCCTGTGTTACCTGGGCAGCTCCAGATCACTGA...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CTAGTTGGGCCAGATGGTTTCGGAGCTACCTCTGCAAGATTTCTCGGCATCCTGCACCCTGCAGGTCAGTaGCCTTGGGACCGAGCACCT +
Preference number: 4 (lower is better)
Translates to: LVGPDGFGATSARFLGILHPAGQ*PWDRAP
Trigger: AGGTGCTCGGTCCCAAGGGCACTGACCTGCAGGGTG...CAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCGAAACCATCTGGCCCAACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTCTGCTCCAGCAGGCGTaGCAGGTCGGTCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPLLQQA*QVGLHV
Trigger: TACATGGAGACCGACCTGGCACGCCTGCTGGAGCAG...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGATGAACAGCTTGGCATaGTCTTCTGCCAGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: FLSLLGSFTCSANPKAAEMNSLA*SSASVP
Trigger: GGGCACGCTGGCAGAAGAGCATGCCAAGCTGTTCAT...CTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TCCTTGCCCCCAAGGTCACGACGTGCTCTCCAACACATCTCTGTAGGGTCTGCTCTTCAGGGAGCAGCTTaGGCAGAGGCCTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: SLPPRSRRALQHISVGSALQGAA*AEASSP
Trigger: AGGTGAAGAGGCCTCTGCGCAAGCTGCTCCCTGAAG...AGCAGACCCTACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGGGGCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS-3UTR GCA 90 bp TTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGCAGGGTACCTGGAACTaGACGTGTCCCAGTTGGACA +
Preference number: 4 (lower is better)
Translates to: FLSLLGSFTCSANPKAAEQGTWN*TCPSWT
Trigger: TGTCCAACTGGGACACGTGCAGTTCCAGGTACCCTG...CTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR GCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCATGCTGTGCGAGTCCTTaGGCGGGTCCACCTGCACGT +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPCCASP*AGPPAR
Trigger: ACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCA...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCCGCTCGGAGCTGCTGTaGGAGTCCTTGCGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSARSELL*ESLRGS
Trigger: GGACCCGCGCAAGGACTCGCACAGCAGCTCCGAGCG...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp GCTTGTCCAGGTAGGACGGCGACCCCACCTTGTAGTCGCAGGAGCGCCCGTAGTAGAGGGCTGTGTCTTTaGGTGTCAGGAAAGTGCATA +
Preference number: 4 (lower is better)
Translates to: ACPGRTATPPCSRRSARSRGLCL*VSGKCI
Trigger: TATGCACTTTCCTGACACGCAAAGACACAGCCCTCT...ACTACGGGCGCTCCTGCGACTACAAGGTGGGGTCGCCGTCCTACCTGGACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR GCA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGAGGTCTCCATGCTGGTaGCTGACCCCTAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ASAEGLCLHTITPCSVGERSPCW*LTPKSP
Trigger: AGGGCTCTTAGGGGTCAGGCACCAGCATGGAGACCT...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCAGTGGGGAAAGAGGGGTCATGAGGTCTCCATaGTGGTGCCTGACCCCTAAG +
Preference number: 4 (lower is better)
Translates to: WNWCLQPHWGRTPSGERGVMRSP*WCLTPK
Trigger: CTTAGGGGTCAGGCACCAGCATGGAGACCTCATGAC...CCCTCTTTCCCCACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGGCACACAGGTTTGCATaGACCAAACTCACCTTAGCC +
Preference number: 4 (lower is better)
Translates to: LAPRILHVFCQPQGSREGAHRFA*TKLTLA
Trigger: GGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGC...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTCCCACCCCACGCTTCTaGAGAGGGCCTGTGTCTACA +
Preference number: 4 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKAPTPRF*RGPVST
Trigger: TGTAGACACAGGCCCTCTGCAGAAGCGTGGGGTGGG...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGGGGGCCAGGAGACTCAGGCCAGGATCCTCTaGAGCCTTTGGATGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SRGRHSMVDRPWPGGQETQARIL*SLWMWA
Trigger: TGCCCACATCCAAAGGCTCCAGAGGATCCTGGCCTG...AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTCTGAGCTGTGCTAGTTaGGGGCGCAGGCTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPLSCAS*GRRLSS
Trigger: AGACGACAGCCTGCGCCCCCAACTAGCACAGCTCAG...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGCTCTGGAGACGAGAATaGCATATGGTCATGCTCGCT +
Preference number: 4 (lower is better)
Translates to: LAPRILHVFCQPQGSREGLWRRE*HMVMLA
Trigger: AGCGAGCATGACCATATGCCATTCTCGTCTCCAGAG...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GGGAGGCAGCGAGGGCTCCTGAAGGCAAGAGCCAGTTGTTTTCCCTCTGTCTGCCTGCCACCAGCTCTCTaGAGACGAGAATGGCATATG +
Preference number: 4 (lower is better)
Translates to: GRQRGLLKARASCFPSVCLPPAL*RREWHM
Trigger: CATATGCCATTCTCGTCTCCAGAGAGCTGGTGGCAG...GCAGACAGAGGGAAAACAACTGGCTCTTGCCTTCAGGAGCCCTCGCTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp CTGTCAGTGTCCCCACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTGTGGGCTCAGTGATCTaGAGCTGCCCAGGTAACACA +
Preference number: 4 (lower is better)
Translates to: LSVSPPHASAEGLCLHTIVGSVI*SCPGNT
Trigger: TGTGTTACCTGGGCAGCTCCAGATCACTGAGCCCAC...AATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGTGGGGACACTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AGGGGCGAGCCACGTGGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCGTGGGCTCAGTGATCTaGAGCTGCCCAGGTAACACA +
Preference number: 4 (lower is better)
Translates to: RGEPRGHVVEDMRRWSLSVGSVI*SCPGNT
Trigger: TGTGTTACCTGGGCAGCTCCAGATCACTGAGCCCAC...GCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCCACGTGGCTCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGATCCCAGTTGGACAGCTaGCTCTGGTTAGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRSQLDS*LWLAAI
Trigger: GATGGCCGCTAACCAGAGCCAGCTGTCCAACTGGGA...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CCA 90 bp AAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTTGAGTCCCTTCCTTACCTCGCTGGCGTCCTaGCACCGGTCAGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: KLTLAYTMRGIAALSPFLTSLAS*HRSGRH
Trigger: GTGGCGGCCTGACCGGTGCCAGGACGCCAGCGAGGT...AAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTCGAAGGCGCGCTCCATaGACGAGTGCGACTGCTCTA +
Preference number: 4 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKARRRAP*TSATAL
Trigger: TAGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTCG...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCTCTCCAGGAAGAGGCTaGCCGGCTCGTCCTCGCGCG +
Preference number: 4 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSASPGRG*PARPRA
Trigger: CGCGCGAGGACGAGCCGGCCAGCCTCTTCCTGGAGA...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp AATAACAGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGTGCTCCTCACCCTCGAAGACATGAGACGTTaGTCTCTGAGCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: NNSHLPGADHVLGVLLTLEDMRR*SLSPRP
Trigger: AGGCCTGGGGCTCAGAGACCAACGTCTCATGTCTTC...GAGGGTGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp GGGGAAAGAGGGCTGTGTCTTTGCGTGTCAGGAAAGTGCATAGGGAGTGCTGAGCCATTGTGGGCTCAGTaGTCTGGAGCTGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GERGLCLCVSGKCIGSAEPLWAQ*SGAAQV
Trigger: TACCTGGGCAGCTCCAGATCACTGAGCCCACAATGG...CTCAGCACTCCCTATGCACTTTCCTGACACGCAAAGACACAGCCCTCTTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp ACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTACAGCACCAAACCATTaGCACCGAAGCCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: TPRFCRGPVSTHHYPMLCTAPNH*HRSPGV
Trigger: AACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGT...ACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp AGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGGGGGCCAGGAGACTACAGCACCAAACCATTaGCACCGAAGCCCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: SRGRHSMVDRPWPGGQETTAPNH*HRSPGV
Trigger: AACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGT...AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TTGAGGTCGCCCAGTTTATTGTCCGGCAGGTCCTCGGGCTTGGTGCAGAGCTTCGCACCTCGTACACTTTaGCGATGTTGTCGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LRSPSLLSGRSSGLVQSFAPRTL*RCCRGP
Trigger: TGGACCACGACAACATCGTCAAAGTGTACGAGGTGC...GAAGCTCTGCACCAAGCCCGAGGACCTGCCGGACAATAAACTGGGCGACCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR TCA 90 bp ACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTAGGAAGGCATCACCCTaGGCAGCTCGTCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: TPRFCRGPVSTHHYPMLCRKASP*AARPCL
Trigger: AAGACAAGGACGAGCTGCTCAGGGTGATGCCTTCCT...ACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS-3UTR TCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAGCGACAGGTCCAGGATaGGCTTGGGCTCCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPATGPG*AWAPSS
Trigger: ACTACTCGGAGCCCAAGCTCATCCTGGACCTGTCGC...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR TCA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGTCCCTTCCTTTGTCATaGGGTCTCCATGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: ASAEGLCLHTITPCSVGESLPLS*GLHAGA
Trigger: GGCACCAGCATGGAGACCTCATGACAAAGGAAGGGA...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp GGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCCCCAGGCCTCCCCTTGAACTCTCCCCAGTTTaGCTTGCAGAGAACGCTCAG +
Preference number: 4 (lower is better)
Translates to: GHVVEDMRRWSLSPRPPLELSPV*LAENAQ
Trigger: CTGAGCGTTCTCTGCAAGTCAAACTGGGGAGAGTTC...AAGGGGAGGCCTGGGGCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp GACCAACCTGGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCCCACCTGCCAGGTGCTaGCCATGTGCTTGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: DQPGGQTQSFISPLYTSTPPARC*PCAWGA
Trigger: AGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGG...GGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCCAGGTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp GGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCTGGGACCAACCTGGAGGTCAGCTGAGCTCCTTAAGATaGTCCAAAGCTCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GSRTPQAANLAWDQPGGQLSSLR*SKAQLC
Trigger: ACACAGCTGAGCTTTGGAGCATCTTAAGGAGCTCAG...CTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp GACCAACCTGGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCGCGCGTGCTTCATGCTaGGGGCATCGCTCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: DQPGGQTQSFISPLYTSTARASC*GHRSGQ
Trigger: TTGCCCTGAGCGATGCCCGCAGCATGAAGCACGCGC...GGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCCAGGTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAATCTCTCGGAGCGCGTaGTTCATGCTGCGGGCATCG +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPISRSA*FMLRAS
Trigger: CGATGCCCGCAGCATGAAGCACGCGCTCCGAGAGAT...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GACCAACCTGGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCCACCCTGCAGGTCAGTaGCCTTGGGACCGAGCACCT +
Preference number: 4 (lower is better)
Translates to: DQPGGQTQSFISPLYTSTHPAGQ*PWDRAP
Trigger: AGGTGCTCGGTCCCAAGGGCACTGACCTGCAGGGTG...GGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCCAGGTTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACTCTGCCAGCGTGCCCTaGTCCAGCAGGCGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANSASVP*SSRRAR
Trigger: CCTGGCACGCCTGCTGGAGCAGGGCACGCTGGCAGA...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp ACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTATGAACAGCTTGGCATaGTCTTCTGCCAGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: TPRFCRGPVSTHHYPMLCMNSLA*SSASVP
Trigger: GGGCACGCTGGCAGAAGAGCATGCCAAGCTGTTCAT...ACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CGACCATGCAGGGGTGAGGCAAATACAGGGGTGCGACAGATGAGAACATTTAAGGCATCTCAGCCAGGATaGAGCCGGCGGCCCACATGT +
Preference number: 4 (lower is better)
Translates to: RPCRGEANTGVRQMRTFKASQPG*SRRPTC
Trigger: ACATGTGGGCCGCCGGCTGCATCCTGGCTGAGATGC...CTTAAATGTTCTCATCTGTCGCACCCCTGTATTTGCCTCACCCCTGCATGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCACAGGGTACCTGGAACTaGACGTGTCCCAGTTGGACA +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAAQGTWN*TCPSWT
Trigger: TGTCCAACTGGGACACGTGCAGTTCCAGGTACCCTG...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR GCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCTTGCGCGGGTCCACCTaGACGTCCTCAGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTLRGST*TSSASG
Trigger: GCCACTGGCTGAGGACGTGCAGGTGGACCCGCGCAA...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCGGAAGCGCTCGGAGCTaGTGTGCGAGTCCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTGSARS*CASPCA
Trigger: CGCGCAAGGACTCGCACAGCAGCTCCGAGCGCTTCC...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGTGCTCTTGACCCACTaGGCGATCTCCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPVLLTH*AISRKR
Trigger: CCTCTTCCTGGAGATCGCGCAGTGGGTCAAGAGCAC...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCTGCTCTGGGCCGCCCTaGGTGCTCTTGACCCACTGC +
Preference number: 4 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSACSGPP*VLLTHC
Trigger: GCAGTGGGTCAAGAGCACGCAGGGCGGCCCAGAGCA...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCGATTTCTCGGCATCCTaGCACCCAGGTGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: FQARPHTKPVILSECLCLDFSAS*HPGGAR
Trigger: GCGGGCCCCACCTGGGTGGCAGGATGCCGAGAAATC...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGATGCGTGTCAGGAAAGTaGATAGGGAGTGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRCVSGK*IGSAEG
Trigger: CCCCTCAGCACTCCCTATGCACTTTCCTGACACGCA...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGACCCAAGGTCACGACGTaGTCTCCAACACATCTCTGT +
Preference number: 4 (lower is better)
Translates to: SSRSSDPSRVLPTPRQQRPKVTT*SPTHLC
Trigger: ACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGG...TCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCCACACCATTACCCCATaGTCTGTGGGTGAGCACACA +
Preference number: 4 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSHTITP*SVGEHT
Trigger: TGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTG...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGGGGGCCAGGAGACTGTGGGCTCAGTGATCTaGAGCTGCCCAGGTAACACA +
Preference number: 4 (lower is better)
Translates to: SRGRHSMVDRPWPGGQETVGSVI*SCPGNT
Trigger: TGTGTTACCTGGGCAGCTCCAGATCACTGAGCCCAC...AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGTCTCCATGTACTCCTaGACGATGTACGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAAVSMYS*TMYATL
Trigger: CAGCGTGGCGTACATCGTCCAGGAGTACATGGAGAC...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGAAAGGAGCAGTCGTaGGGAACGGTACCACTTTGT +
Preference number: 4 (lower is better)
Translates to: SSRSSDPSRVLPTPRQQRGKEQS*GTVPLC
Trigger: ACAAAGTGGTACCGTTCCCCACGACTGCTCCTTTCC...TCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp TTGAGGTCGCCCAGTTTATTGTCCGGCAGGTCCTCGGGCTTGGTGCAGAGCTTCGGAAAGGAGCAGTCGTaGGGAACGGTACCACTTTGT +
Preference number: 4 (lower is better)
Translates to: LRSPSLLSGRSSGLVQSFGKEQS*GTVPLC
Trigger: ACAAAGTGGTACCGTTCCCCACGACTGCTCCTTTCC...GAAGCTCTGCACCAAGCCCGAGGACCTGCCGGACAATAAACTGGGCGACCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCACTCAGGGCACGAGTATaGGCTCATGTAGGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAALRARV*AHVGVL
Trigger: CAACACCCCTACATGAGCCCATACTCGTGCCCTGAG...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CCA 90 bp TGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCAGTGGGGAAAGAGGGTGCTGGCAGGGAGGTTaGAGGGATTCTTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: WNWCLQPHWGRTPSGERGCWQGG*RDSWNW
Trigger: CCAATTCCAAGAATCCCTCCAACCTCCCTGCCAGCA...CCCTCTTTCCCCACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp ACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTCAGGGATCCCATCAATaGATTCTGGAGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: TPRFCRGPVSTHHYPMLCQGSHQ*ILEASR
Trigger: CCTGGATGCCTCCAGAATTCATTGATGGGATCCCTG...ACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTAGGAAGGCATCACCCTaGGCAGCTCGTCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKARKASP*AARPCL
Trigger: AAGACAAGGACGAGCTGCTCAGGGTGATGCCTTCCT...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR TCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCACGCCCTGCGTGCTCTTaGCCCACTGCGCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPRPACS*PTARSP
Trigger: TGGAGATCGCGCAGTGGGTCAAGAGCACGCAGGGCG...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR TCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGACCCCAGGCTGTTCTaGCCTGAAACGAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRDPRLF*PETKIS
Trigger: GGAAATCTTCGTTTCAGGTCAGAACAGCCTGGGGTC...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp CCATTACCCCATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACGCCTGGGAGAAGGGCTaGTTTTACCCACAGACCCCA +
Preference number: 4 (lower is better)
Translates to: PLPHALWVSTQVCMHQTHAWEKG*FYPQTP
Trigger: TGGGGTCTGTGGGTAAAATCAGCCCTTCTCCCAGGC...GTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGGGGCATTGCTGCTTTaGGTCCCTTCCTTTGTCATG +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAAGALLL*VPSFVM
Trigger: CATGACAAAGGAAGGGACTCAAAGCAGCAATGCCCC...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp ACGTGGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCCCCAGGCCTCCGAAGGCTCTGGAATGTaGCCCACAATGCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: TWPCGRRHETLVSEPQASEGSGM*PTMLVM
Trigger: CATCACAAGCATTGTGGGTCACATTCCAGAGCCTTC...GGAGGCCTGGGGCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGGTGTTCCAAGCAGTATaGAGGGATCCCATCAATGAA +
Preference number: 4 (lower is better)
Translates to: LAPRILHVFCQPQGSREGVFQAV*RDPINE
Trigger: TTCATTGATGGGATCCCTGCATACTGCTTGGAACAC...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGCTGTCGTCTTAACCTaGATTGGGAGGGCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAAAVVLT*IGRAVY
Trigger: GTAGACAGCCCTCCCAATGCAGGTTAAGACGACAGC...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTTGAGTCCCTTCCTTGGAGCGCGTGCTTCATaGTGCGGGCATCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KLTLAYTMRGIAALSPFLGARAS*CGHRSG
Trigger: CCCTGAGCGATGCCCGCAGCATGAAGCACGCGCTCC...AAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CCTCTTCCCCCGAGGAGGGTGGAAACTTTCTCCGCCCTCCTAGCAAACTTTTCTATGAACAGCTTGGCATaGTCTTCTGCCAGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: PLPPRRVETFSALLANFSMNSLA*SSASVP
Trigger: GGGCACGCTGGCAGAAGAGCATGCCAAGCTGTTCAT...AGAAAAGTTTGCTAGGAGGGCGGAGAAAGTTTCCACCCTCCTCGGGGGAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGTCTCCAGGATGAGTTaGATCTGCTCCAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRVSRMS*ICSSSW
Trigger: CCATGAGCTGGAGCAGATGCAACTCATCCTGGAGAC...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR GCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCTGCTGTGCGAGTCCTTaGGCGGGTCCACCTGCACGT +
Preference number: 4 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTCCASP*AGPPAR
Trigger: ACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCA...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCTGCTGTGCGAGTCCTTaGGCGGGTCCACCTGCACGT +
Preference number: 4 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSACCASP*AGPPAR
Trigger: ACGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCA...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAGTGCTCTTGACCCACTaGGCGATCTCCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPVLLTH*AISRKR
Trigger: CCTCTTCCTGGAGATCGCGCAGTGGGTCAAGAGCAC...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACTGCTCTGGGCCGCCCTaGGTGCTCTTGACCCACTGC +
Preference number: 4 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANCSGPP*VLLTHC
Trigger: GCAGTGGGTCAAGAGCACGCAGGGCGGCCCAGAGCA...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp TCTCAGACCAAGTTTCTAACAAAAAGCCAGAACGACCCCAGTAGAGGAAGACATAGGGCGGCCGCCTCCTaGCAGCCCCGGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SQTKFLTKSQNDPSRGRHRAAAS*QPRLSL
Trigger: CAGAGAAAGCCGGGGCTGGCAGGAGGCGGCCGCCCT...ATGTCTTCCTCTACTGGGGTCGTTCTGGCTTTTTGTTAGAAACTTGGTCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TCCTTGCCCCCAAGGTCACGACGTGCTCTCCAACACATCTCTGTAGGGTCTGCTATCCTTCACGTGTTCTaGCAACCCCAAGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SLPPRSRRALQHISVGSAILHVF*QPQGSR
Trigger: TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGAT...AGCAGACCCTACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGGGGCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGTGGGGCCCGCAGACTaGTGTCTAAAGCCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPVGPAD*CLKPFL
Trigger: AAGAAACGGCTTTAGACAGCAGTCTGCGGGCCCCAC...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACGATTTCTCGGCATCCTaGCACCCAGGTGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANDFSAS*HPGGAR
Trigger: GCGGGCCCCACCTGGGTGGCAGGATGCCGAGAAATC...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGTGCTCCTCACCCTCTGTTTCCTCCCCAGTTTGACTTaGAGAGAACGCTCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SHLPGADHVLGVLLTLCFLPSLT*RERSEE
Trigger: TTCTTCTGAGCGTTCTCTGCAAGTCAAACTGGGGAG...GAAACAGAGGGTGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp AGAAATCTCAGGACAAAGGTAGTGTCTGTGCTCAAGCCTAGCCCTCTGCCGTGTCAGCCTCTTCACAGCTaGTCCCACCCCACAGGACTG +
Preference number: 4 (lower is better)
Translates to: RNLRTKVVSVLKPSPLPCQPLHS*SHPTGL
Trigger: CAGTCCTGTGGGGTGGGAGCAGCTGTGAAGAGGCTG...ACACGGCAGAGGGCTAGGCTTGAGCACAGACACTACCTTTGTCCTGAGATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp ATGCTATTCATGCTACCGTGTGGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCACCATGTGCTTGGGGTaGTCCTCACCCTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: MLFMLPCGSRTPQAANLATMCLG*SSPSVS
Trigger: GGAAACAGAGGGTGAGGAGCACCCCAAGCACATGGT...GGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCCACACGGTAGCATGAATAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp GGTTGGAGGGATTCTTGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCATCCTCTGGAGCCTTTaGATGTGGGCAGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: GWRDSWNWCLQPHWGRTPILWSL*MWAASS
Trigger: AGAGGATGCTGCCCACATCCAAAGGCTCCAGAGGAT...GGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CTCCTGAAGGCAAGAGCCAGTTGTTTTCCCTCTGTCTGCAGTGCACCTCTGTACCAGGCCAGGATCCTCTaGAGCCTTTGGATGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLKARASCFPSVCSAPLYQARIL*SLWMWA
Trigger: TGCCCACATCCAAAGGCTCCAGAGGATCCTGGCCTG...GTACAGAGGTGCACTGCAGACAGAGGGAAAACAACTGGCTCTTGCCTTCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp TCGAAGGCGCGCTCCATGGACGAGTGCGACTGCTCTAGGAAGCGCTCGGAGCTGACAAGAGGCTCTTTCTaGCTGAAATGCAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SKARSMDECDCSRKRSELTRGSF*LKCKSC
Trigger: ACAACTCTTGCATTTCAGCCAGAAAGAGCCTCTTGT...CAGCTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp TCCTTGCCCCCAAGGTCACGACGTGCTCTCCAACACATCTCTGTAGGGTCTGCTTTGACGATGTTGTCGTaGTCCAGGCGCCGAATGATC +
Preference number: 4 (lower is better)
Translates to: SLPPRSRRALQHISVGSALTMLS*SRRRMI
Trigger: GATCATTCGGCGCCTGGACCACGACAACATCGTCAA...AGCAGACCCTACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGGGGCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp ACCCCTTCATCTAACTTCATTAACTCTATAGCAGGGGAGGCAGCGAGGGCTCCTGCAGGTCAGTGCCCTTaGGACCGAGCACCTCGTACA +
Preference number: 4 (lower is better)
Translates to: TPSSNFINSIAGEAARAPAGQCP*DRAPRT
Trigger: TGTACGAGGTGCTCGGTCCCAAGGGCACTGACCTGC...AGGAGCCCTCGCTGCCTCCCCTGCTATAGAGTTAATGAAGTTAGATGAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAATCTGCTCCAGCTCATaGGCCCCAGCAAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRICSSS*APAKSI
Trigger: AATGCTCTTTGCTGGGGCCCATGAGCTGGAGCAGAT...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CCA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCAGGGGTGTTGTGAGGTaGGCTCGTCCTCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: FQARPHTKPVILSECLCLRGVVR*ARPQGT
Trigger: CGTGCCCTGAGGACGAGCCCACCTCACAACACCCCT...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS-3UTR CCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCAGGGGTGTTGTGAGGTaGGCTCGTCCTCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTRGVVR*ARPQGT
Trigger: CGTGCCCTGAGGACGAGCCCACCTCACAACACCCCT...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAATCCTGCCACCCAGGTaGGGCCCGCAGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPILPPR*GPQTAV
Trigger: GACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGAT...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CGCGCCACAGCAGCTTGTCCAGGTAGGACGGCGACCCCACCTTGTAGTCGCAGGCTAGGAGAAACAAACTaGTTCAGTTTCCAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RATAACPGRTATPPCSRRLGETN*FSFQFQ
Trigger: CTGAAACTGGAAACTGAACCAGTTTGTTTCTCCTAG...CCTGCGACTACAAGGTGGGGTCGCCGTCCTACCTGGACAAGCTGCTGTGGCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp TTGAGGTCGCCCAGTTTATTGTCCGGCAGGTCCTCGGGCTTGGTGCAGAGCTTCATGGTAGAATGTTCCTaGGGACCAGATAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRSPSLLSGRSSGLVQSFMVECS*GPDRGC
Trigger: ACAGCCCCTATCTGGTCCCCAGGAACATTCTACCAT...GAAGCTCTGCACCAAGCCCGAGGACCTGCCGGACAATAAACTGGGCGACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CCA 90 bp CCCGCAGACTGCTGTCTAAAGCCGTTTCTTCCCTGTGCACCACATGTGGTCTCCCCTCTACCTGGAAACTaGCTGGACTTCCTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: PADCCLKPFLPCAPHVVSPLPGN*LDFLWV
Trigger: TACCCACAGGAAGTCCAGCCAGTTTCCAGGTAGAGG...GGAGACCACATGTGGTGCACAGGGAAGAAACGGCTTTAGACAGCAGTCTGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGACCCAAGACCAACTGGTaGAATCCTCTACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SSRSSDPSRVLPTPRQQRPKTNW*NPLPGN
Trigger: GTTTCCAGGTAGAGGATTCCACCAGTTGGTCTTGGG...TCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GGTTGGAGGGATTCTTGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCCAGCCCAAGACCAACTaGTGGAATCCTCTACCTGGA +
Preference number: 4 (lower is better)
Translates to: GWRDSWNWCLQPHWGRTPQPKTN*WNPLPG
Trigger: TCCAGGTAGAGGATTCCACCAGTTGGTCTTGGGCTG...GGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TGCTCAAGCCTAGCCCTCTGCCGTGTGGGGTATGGGTCCGGTTTTCTATTGAACGCTGCTAATCTTGCCTaGGACCAACCTGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CSSLALCRVGYGSGFLLNAANLA*DQPGGQ
Trigger: CTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGC...GTTCAATAGAAAACCGGACCCATACCCCACACGGCAGAGGGCTAGGCTTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR CAA 72 bp GCCCTCTGCCGTGTGGGGTATGGGTCCGGTTTTCTATaGAACATGCTATTCATGCTACCGTGTGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: ALCRVGYGSGFL*NMLFMLPCGSR
Trigger: CCGGCTTCCACACGGTAGCATGAATAGCATGTTCAATAGAAAACCGGACCCATACCCCACACGGCAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTACACCAAGTTACGCCTaGGGTTCCAAATGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPTPSYA*GSKCRG
Trigger: TCCCCTGCATTTGGAACCTCAGGCGTAACTTGGTGT...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp CCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGCAAGAGTTGTTTGCTaGGCTGAGCTCCTTAAGATG +
Preference number: 4 (lower is better)
Translates to: PHASAEGLCLHTITPCSVARVVC*AELLKM
Trigger: CATCTTAAGGAGCTCAGCTCAGCAAACAACTCTTGC...CACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGATGTTACCAACCCTTCTaGCAGATAACCCTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SSRSSDPSRVLPTPRQQRCYQPF*QITLVG
Trigger: TCCCACAAGGGTTATCTGTCAGAAGGGTTGGTAACA...TCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCTCAGGGCGCGGGAGATaGACACGTCCAGGTCGAACT +
Preference number: 4 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTSGRGR*TRPGRT
Trigger: AGTTCGACCTGGACGTGTTCATCTCCCGCGCCCTGA...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR TCA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCAGGCTGTTCTGACCTaGAACGAAGATTTCCGACCA +
Preference number: 4 (lower is better)
Translates to: ASAEGLCLHTITPCSVGEQAVLT*NEDFRP
Trigger: TGGTCGGAAATCTTCGTTTCAGGTCAGAACAGCCTG...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp CTGTCAGTGTCCCCACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTCTGCTGTCCTCCAAATaGGCAGTTCATGTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LSVSPPHASAEGLCLHTILLSSK*AVHVEN
Trigger: GTTCTCTACATGAACTGCTCATTTGGAGGACAGCAG...AATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGTGGGGACACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp CCCGCAGACTGCTGTCTAAAGCCGTTTCTTCCCTGTGCACCACATGTGGTCTCCAGATTTAAGGTGCTGTaGTGTGAGGGTGAACGCAGC +
Preference number: 4 (lower is better)
Translates to: PADCCLKPFLPCAPHVVSRFKVL*CEGERS
Trigger: GCTGCGTTCACCCTCACATCACAGCACCTTAAATCT...GGAGACCACATGTGGTGCACAGGGAAGAAACGGCTTTAGACAGCAGTCTGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GGTTGGAGGGATTCTTGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCTGCACCAAGAGAGGCTaGAGGAATGTGGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: GWRDSWNWCLQPHWGRTPCTKRG*RNVASF
Trigger: GAAAGATGCCACATTCCTGCAGCCTCTCTTGGTGCA...GGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCTGGGACCAACCTGGAGGTCAGTCTTTCTGGCTGAAATaGAAGAGTTGTTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GSRTPQAANLAWDQPGGQSFWLK*KSCLLS
Trigger: GCTCAGCAAACAACTCTTGCATTTCAGCCAGAAAGA...CTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGCTGTCGTCTTAACCTaGATTGGGAGGGCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPAVVLT*IGRAVY
Trigger: GTAGACAGCCCTCCCAATGCAGGTTAAGACGACAGC...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp ACGTGGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCCCCAGGCCTCCAATGGCATATGGTCATaGTCGCTGAGCTGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: TWPCGRRHETLVSEPQASNGIWS*SLSCAS
Trigger: ACTAGCACAGCTCAGCGAGCATGACCATATGCCATT...GGAGGCCTGGGGCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCCACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp ACATGCTATTCATGCTACCGTGTGGAAGCCGGACCCCTCAGGCTGCTAATCTTGTCAGTGATCTGGAGCTaGCCAGGTAACACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TCYSCYRVEAGPLRLLILSVIWS*PGNTGA
Trigger: TGCCCCTGTGTTACCTGGGCAGCTCCAGATCACTGA...CAAGATTAGCAGCCTGAGGGGTCCGGCTTCCACACGGTAGCATGAATAGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAGCGCGTGCTTCATGCTaGGGGCATCGCTCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPARASC*GHRSGQ
Trigger: TTGCCCTGAGCGATGCCCGCAGCATGAAGCACGCGC...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GGGGAAAGAGGGCTGTGTCTTTGCGTGTCAGGAAAGTGCATAGGGAGTGCTGAGCGATCTCATCCTCAATaGGGAAGGGGTGTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: GERGLCLCVSGKCIGSAERSHPQ*GRGVVR
Trigger: CCTCACAACACCCCTTCCGCATTGAGGATGAGATCG...CTCAGCACTCCCTATGCACTTTCCTGACACGCAAAGACACAGCCCTCTTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS-3UTR GCA 90 bp CGACCATGCAGGGGTGAGGCAAATACAGGGGTGCGACAGATGAGAACATTTAAGATGGACGAGTGCGACTaGTCTAGGAAGCGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: RPCRGEANTGVRQMRTFKMDECD*SRKRSE
Trigger: CTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCAT...CTTAAATGTTCTCATCTGTCGCACCCCTGTATTTGCCTCACCCCTGCATGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCACTCTCTGGGCCTAATTaGCTTTCCTCAGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAALSGPN*LSSAVS
Trigger: ACTGACAGCTGAGGAAAGGCAATTAGGCCCAGAGAG...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CCCGCAGACTGCTGTCTAAAGCCGTTTCTTCCCTGTGCACCACATGTGGTCTCCTTAAGCGAGTGTCTCTaGCTCTCTGGGCCTAATTGC +
Preference number: 4 (lower is better)
Translates to: PADCCLKPFLPCAPHVVSLSECL*LSGPNC
Trigger: GCAATTAGGCCCAGAGAGGCAGAGACACTCGCTTAA...GGAGACCACATGTGGTGCACAGGGAAGAAACGGCTTTAGACAGCAGTCTGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TCCTTGCCCCCAAGGTCACGACGTGCTCTCCAACACATCTCTGTAGGGTCTGCTTTAAGCGAGTGTCTCTaGCTCTCTGGGCCTAATTGC +
Preference number: 4 (lower is better)
Translates to: SLPPRSRRALQHISVGSALSECL*LSGPNC
Trigger: GCAATTAGGCCCAGAGAGGCAGAGACACTCGCTTAA...AGCAGACCCTACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGGGGCAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CTGTCAGTGTCCCCACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTGAAGATTTCCGACCATaGAGGGGTGAGGCAAATACA +
Preference number: 4 (lower is better)
Translates to: LSVSPPHASAEGLCLHTIEDFRP*RGEANT
Trigger: TGTATTTGCCTCACCCCTGCATGGTCGGAAATCTTC...AATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGTGGGGACACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AGAAATCTCAGGACAAAGGTAGTGTCTGTGCTCAAGCCTAGCCCTCTGCCGTGTCTCTCCCAGGATGGCTaGTGTCATTGTCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RNLRTKVVSVLKPSPLPCLSQDG*CHCPCS
Trigger: GGAGCAGGGACAATGACAGCAGCCATCCTGGGAGAG...ACACGGCAGAGGGCTAGGCTTGAGCACAGACACTACCTTTGTCCTGAGATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp AGGGGCGAGCCACGTGGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCTGTTTTCCCTCTGTCTaGAGTGCACCTCTGTACAAG +
Preference number: 4 (lower is better)
Translates to: RGEPRGHVVEDMRRWSLSCFPSV*SAPLYK
Trigger: CTTGTACAGAGGTGCACTGCAGACAGAGGGAAAACA...GCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCCACGTGGCTCGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp GAGGAGTGGGTAATAATAACAGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGTGGAGCCTTTGGATGTaGGCAGCATCCTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: EEWVIITATCQVLTMCLGWSLWM*AASSFT
Trigger: GGTGAAAGAGGATGCTGCCCACATCCAAAGGCTCCA...CCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGTTATTATTACCCACTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTCTGCCACCAGCTCTCTaGAGACGAGAATGGCATATG +
Preference number: 4 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPLPPAL*RREWHM
Trigger: CATATGCCATTCTCGTCTCCAGAGAGCTGGTGGCAG...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTGGAAAGGAGCAGTCGTaGGGAACGGTACCACTTTGT +
Preference number: 4 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKAGKEQS*GTVPLC
Trigger: ACAAAGTGGTACCGTTCCCCACGACTGCTCCTTTCC...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCCGAAGGCGCGCTCCATaGACGAGTGCGACTGCTCTA +
Preference number: 4 (lower is better)
Translates to: FQARPHTKPVILSECLCLRRRAP*TSATAL
Trigger: TAGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTCG...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TTCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAGACTGCTGTCTAAAGCCGTTGAACATTTAAGTACTTaGGGAGCCAGGAAAGTATGC +
Preference number: 4 (lower is better)
Translates to: FSASCHPGGARRLLSKAVEHLST*GARKVC
Trigger: GCATACTTTCCTGGCTCCCCAAGTACTTAAATGTTC...AACGGCTTTAGACAGCAGTCTGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCTGCCTTCAACCTCACTaGGGTAGGACGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTCLQPH*GRTPSG
Trigger: CCCACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCA...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAATCTTCCTACCTTTCTaGATTCCTTGCCCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SSRSSDPSRVLPTPRQQRIFLPF*IPCPQG
Trigger: ACCTTGGGGGCAAGGAATCCAGAAAGGTAGGAAGAT...TCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CCATTACCCCATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACATGAGGTCTCCATGCTaGTGCCTGACCCCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: PLPHALWVSTQVCMHQTHMRSPC*CLTPKS
Trigger: GCTCTTAGGGGTCAGGCACCAGCATGGAGACCTCAT...GTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TCCTTGCCCCCAAGGTCACGACGTGCTCTCCAACACATCTCTGTAGGGTCTGCTTCCTGTGGGTATCTTTaGGAGTGTTGGGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SLPPRSRRALQHISVGSASCGYL*ECWGKR
Trigger: TCTCTTCCCCCAACACTCCCAAAGATACCCACAGGA...AGCAGACCCTACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGGGGCAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCCCAAGACCAACTGGTaGAATCCTCTACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: ASAEGLCLHTITPCSVGEPKTNW*NPLPGN
Trigger: GTTTCCAGGTAGAGGATTCCACCAGTTGGTCTTGGG...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAACACCAAGTTACGCCTaGGGTTCCAAATGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPTPSYA*GSKCRG
Trigger: TCCCCTGCATTTGGAACCTCAGGCGTAACTTGGTGT...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp CTCCTGAAGGCAAGAGCCAGTTGTTTTCCCTCTGTCTGCAGTGCACCTCTGTACCAGGGATCCCATCAATaGATTCTGGAGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LLKARASCFPSVCSAPLYQGSHQ*ILEASR
Trigger: CCTGGATGCCTCCAGAATTCATTGATGGGATCCCTG...GTACAGAGGTGCACTGCAGACAGAGGGAAAACAACTGGCTCTTGCCTTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGCAAGAGTTGTTTGCTaGGCTGAGCTCCTTAAGATG +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRARVVC*AELLKM
Trigger: CATCTTAAGGAGCTCAGCTCAGCAAACAACTCTTGC...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCATTGTGGGCTCAGTaGTCTGGAGCTGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTPLWAQ*SGAAQV
Trigger: TACCTGGGCAGCTCCAGATCACTGAGCCCACAATGG...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAGCGACAGGTCCAGGATaGGCTTGGGCTCCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPATGPG*AWAPSS
Trigger: ACTACTCGGAGCCCAAGCTCATCCTGGACCTGTCGC...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR TCA 90 bp TCTCAGACCAAGTTTCTAACAAAAAGCCAGAACGACCCCAGTAGAGGAAGACATCGCCCTGCGTGCTCTTaGCCCACTGCGCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: SQTKFLTKSQNDPSRGRHRPACS*PTARSP
Trigger: TGGAGATCGCGCAGTGGGTCAAGAGCACGCAGGGCG...ATGTCTTCCTCTACTGGGGTCGTTCTGGCTTTTTGTTAGAAACTTGGTCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp CTAGTTGGGCCAGATGGTTTCGGAGCTACCTCTGCAAGATTTCTCGGCATCCTGGGATGCACGCACCATTaGGGTCGCCCAGTTTATTGT +
Preference number: 4 (lower is better)
Translates to: LVGPDGFGATSARFLGILGCTHH*GRPVYC
Trigger: ACAATAAACTGGGCGACCTCAATGGTGCGTGCATCC...CAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCGAAACCATCTGGCCCAACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TCCTTGCCCCCAAGGTCACGACGTGCTCTCCAACACATCTCTGTAGGGTCTGCTCAGGGGTGCGACAGATaGGAACATTTAAGTACTTGG +
Preference number: 4 (lower is better)
Translates to: SLPPRSRRALQHISVGSAQGCDR*EHLSTW
Trigger: CCAAGTACTTAAATGTTCTCATCTGTCGCACCCCTG...AGCAGACCCTACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGGGGCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCGCCTGGGAGAAGGGCTaGTTTTACCCACAGACCCCA +
Preference number: 4 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSAAWEKG*FYPQTP
Trigger: TGGGGTCTGTGGGTAAAATCAGCCCTTCTCCCAGGC...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCTCCATGCTGGTGCCTaGCCCCTAAGAGCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANLHAGA*PLRALA
Trigger: AGCAAGGGCTCTTAGGGGTCAGGCACCAGCATGGAG...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp GGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCCTCAAAAAGGGCAGCGAGGGCTCCTaGAGGCAAGAGCCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GGQTQSFISPLYTSTLKKGSEGS*RQEPVV
Trigger: AACAACTGGCTCTTGCCTTCAGGAGCCCTCGCTGCC...CTTTTTGAGGGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCGTGTTCCAAGCAGTATaGAGGGATCCCATCAATGAA +
Preference number: 4 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSVFQAV*RDPINE
Trigger: TTCATTGATGGGATCCCTGCATACTGCTTGGAACAC...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AATAACAGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGTGCTCCTCACCCTCGTGTTCCAAGCAGTATaGAGGGATCCCATCAATGAA +
Preference number: 4 (lower is better)
Translates to: NNSHLPGADHVLGVLLTLVFQAV*RDPINE
Trigger: TTCATTGATGGGATCCCTGCATACTGCTTGGAACAC...GAGGGTGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp TCCTTGCCCCCAAGGTCACGACGTGCTCTCCAACACATCTCTGTAGGGTCTGCTAATGGCATATGGTCATaGTCGCTGAGCTGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: SLPPRSRRALQHISVGSANGIWS*SLSCAS
Trigger: ACTAGCACAGCTCAGCGAGCATGACCATATGCCATT...AGCAGACCCTACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGGGGCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AGTGATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGCATAGACACTGGCGATaGAGTCACCCTTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SDQPLSQGPVQTRSHRLKHRHWR*SHPSQP
Trigger: TGGCTGAGAAGGGTGACTGCATCGCCAGTGTCTATG...CTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CCCAGCAGTGAGCAAAACAAAGTCCCTGTAATCATGAGGTGCACACTTTGGATGATCTCTCGGAGCGCGTaGTTCATGCTGCGGGCATCG +
Preference number: 4 (lower is better)
Translates to: PSSEQNKVPVIMRCTLWMISRSA*FMLRAS
Trigger: CGATGCCCGCAGCATGAAGCACGCGCTCCGAGAGAT...CATCCAAAGTGTGCACCTCATGATTACAGGGACTTTGTTTTGCTCACTGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp CCATTACCCCATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACGTCTCCAGGATGAGTTaGATCTGCTCCAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PLPHALWVSTQVCMHQTHVSRMS*ICSSSW
Trigger: CCATGAGCTGGAGCAGATGCAACTCATCCTGGAGAC...GTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS-3UTR GCA 90 bp CCCGCAGACTGCTGTCTAAAGCCGTTTCTTCCCTGTGCACCACATGTGGTCTCCGATTCTTGGAATTGGTaGCTTCAACCTCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: PADCCLKPFLPCAPHVVSDSWNW*LQPHWG
Trigger: ACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATC...GGAGACCACATGTGGTGCACAGGGAAGAAACGGCTTTAGACAGCAGTCTGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGATATGAGGGGCATTGCTaGTTTGAGTCCCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRYEGHC*FESLPL
Trigger: CAAAGGAAGGGACTCAAAGCAGCAATGCCCCTCATA...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTGCACACAGGTTTGCATaGACCAAACTCACCTTAGCC +
Preference number: 4 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKAAHRFA*TKLTLA
Trigger: GGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGC...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GGTTGGAGGGATTCTTGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCGTGAGCACACAGGTTTaGATGCACCAAACTCACCTT +
Preference number: 4 (lower is better)
Translates to: GWRDSWNWCLQPHWGRTPVSTQV*MHQTHL
Trigger: AAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCAC...GGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GAGGAGTGGGTAATAATAACAGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGATAATAACAGCCACCTaGCAGGTGCTGACCATGTGC +
Preference number: 4 (lower is better)
Translates to: EEWVIITATCQVLTMCLGIITAT*QVLTMC
Trigger: GCACATGGTCAGCACCTGGCAGGTGGCTGTTATTAT...CCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGTTATTATTACCCACTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp AAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTTGAGTCCCTTCCTTCTGAGCTGTGCTAGTTaGGGGCGCAGGCTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: KLTLAYTMRGIAALSPFLLSCAS*GRRLSS
Trigger: AGACGACAGCCTGCGCCCCCAACTAGCACAGCTCAG...AAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp ATGCTATTCATGCTACCGTGTGGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCCATACCCATAGACACTaGCGATGCAGTCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: MLFMLPCGSRTPQAANLAHTHRH*RCSHPS
Trigger: AGAAGGGTGACTGCATCGCCAGTGTCTATGGGTATG...GGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCCACACGGTAGCATGAATAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp AAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTTGAGTCCCTTCCTTGCAGGTCAGTGCCCTTaGGACCGAGCACCTCGTACA +
Preference number: 4 (lower is better)
Translates to: KLTLAYTMRGIAALSPFLAGQCP*DRAPRT
Trigger: TGTACGAGGTGCTCGGTCCCAAGGGCACTGACCTGC...AAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAGCCCGCGGAGCAGCTaGTACATGAACAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSASPRSS*YMNSLA
Trigger: TGCCAAGCTGTTCATGTACCAGCTGCTCCGCGGGCT...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCACACACTTTGGTGTAGTTATTaGGGGAAAGGAGCAGTCGTG +
Preference number: 4 (lower is better)
Translates to: AEGLCLHTITPCSVGEHTLWCSY*GKGAVV
Trigger: CACGACTGCTCCTTTCCCCCAATAACTACACCAAAG...TGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCACTTTGGTGTAGTTATTaGGGGAAAGGAGCAGTCGTG +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAALWCSY*GKGAVV
Trigger: CACGACTGCTCCTTTCCCCCAATAACTACACCAAAG...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp TTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGTCTCCAGAAAGTCGATaGCTTCACTGTTCACTTCAG +
Preference number: 4 (lower is better)
Translates to: FLSLLGSFTCSANPKAAESPESR*LHCSLQ
Trigger: CTGAAGTGAACAGTGAAGCCATCGACTTTCTGGAGA...CTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCACTCACCACCTTTCTTTaGAGAAGGCCTCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPLTTFL*RRPRSA
Trigger: TGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAG...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGGCAGTTTAAGAAATaGACATTCCTCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSRQFKK*TFLSLL
Trigger: GAGGAGCGAGAGGAATGTCCATTTCTTAAACTGCCT...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp CCCGCAGACTGCTGTCTAAAGCCGTTTCTTCCCTGTGCACCACATGTGGTCTCCAACACATTTGCTCTATaGCAGGACCTCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PADCCLKPFLPCAPHVVSNTFAL*QDLTAV
Trigger: GACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTT...GGAGACCACATGTGGTGCACAGGGAAGAAACGGCTTTAGACAGCAGTCTGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CCCAGCAGTGAGCAAAACAAAGTCCCTGTAATCATGAGGTGCACACTTTGGATGTTCCCCCGAGGAGGGTaGAAACTTTCTCCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PSSEQNKVPVIMRCTLWMFPRGG*KLSPPS
Trigger: GGAGGGCGGAGAAAGTTTCCACCCTCCTCGGGGGAA...CATCCAAAGTGTGCACCTCATGATTACAGGGACTTTGTTTTGCTCACTGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp GGTTGGAGGGATTCTTGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCTTAGATTCCAAAACCTaGGCCAGTCTGGTAAGCACT +
Preference number: 4 (lower is better)
Translates to: GWRDSWNWCLQPHWGRTPLDSKT*ASLVST
Trigger: AGTGCTTACCAGACTGGCTCAGGTTTTGGAATCTAA...GGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp GGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCCTCAAAAAGCCATTGTGGGCTCAGTaGTCTGGAGCTGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GGQTQSFISPLYTSTLKKPLWAQ*SGAAQV
Trigger: TACCTGGGCAGCTCCAGATCACTGAGCCCACAATGG...CTTTTTGAGGGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp CGACCATGCAGGGGTGAGGCAAATACAGGGGTGCGACAGATGAGAACATTTAAGGGATGCACGCACCATTaGGGTCGCCCAGTTTATTGT +
Preference number: 4 (lower is better)
Translates to: RPCRGEANTGVRQMRTFKGCTHH*GRPVYC
Trigger: ACAATAAACTGGGCGACCTCAATGGTGCGTGCATCC...CTTAAATGTTCTCATCTGTCGCACCCCTGTATTTGCCTCACCCCTGCATGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp CGACCATGCAGGGGTGAGGCAAATACAGGGGTGCGACAGATGAGAACATTTAAGCCTTTGCTAGGAAAGTaGTCAACCCCTAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RPCRGEANTGVRQMRTFKPLLGK*STPKPG
Trigger: CCCTGGCTTAGGGGTTGATCACTTTCCTAGCAAAGG...CTTAAATGTTCTCATCTGTCGCACCCCTGTATTTGCCTCACCCCTGCATGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGGAAAGTATGCTTGGTaGCTAGGAGAAACAAACTGG +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAAGKYAW*LGETNW
Trigger: CCAGTTTGTTTCTCCTAGTCACCAAGCATACTTTCC...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp AGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGGGGGCCAGGAGACTGGAAAGTATGCTTGGTaGCTAGGAGAAACAAACTGG +
Preference number: 4 (lower is better)
Translates to: SRGRHSMVDRPWPGGQETGKYAW*LGETNW
Trigger: CCAGTTTGTTTCTCCTAGTCACCAAGCATACTTTCC...AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp CATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACCTTAGCCTAGGGGCATTGCTGCTTTaGGTCCCTTCCTTTGTCATG +
Preference number: 4 (lower is better)
Translates to: HALWVSTQVCMHQTHLSLGALLL*VPSFVM
Trigger: CATGACAAAGGAAGGGACTCAAAGCAGCAATGCCCC...TAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGGGACAAAATGGCACATaGGGAGTGGTGTACATTTCT +
Preference number: 4 (lower is better)
Translates to: ASAEGLCLHTITPCSVGEGQNGT*GVVYIS
Trigger: AGAAATGTACACCACTCCTCATGTGCCATTTTGTCC...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp AATAACAGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGTGCTCCTCACCCTCATGAAATTCAGGAACTaGCCACCAGTCAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: NNSHLPGADHVLGVLLTLMKFRN*PPVRRK
Trigger: TTTTCTCCTGACTGGTGGTCAGTTCCTGAATTTCAT...GAGGGTGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp TCCGGTTTTCTATTGAACATGCTATTCATGCTACCGTGTGGAAGCCGGACCCCTCAGGACCCTCCTCTCTaGCTTAGCTGGCAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SGFLLNMLFMLPCGSRTPQDPPL*LSWQGF
Trigger: AAAGCCTTGCCAGCTAAGTCAGAGAGGAGGGTCCTG...AGGGGTCCGGCTTCCACACGGTAGCATGAATAGCATGTTCAATAGAAAACCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp CCTCTTCCCCCGAGGAGGGTGGAAACTTTCTCCGCCCTCCTAGCAAACTTTTCTAATAATTGGCAGAGCTaGGATCTGATCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PLPPRRVETFSALLANFSNNWQS*DLIPAV
Trigger: CACTGCTGGGATCAGATCTCAGCTCTGCCAATTATT...AGAAAAGTTTGCTAGGAGGGCGGAGAAAGTTTCCACCCTCCTCGGGGGAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCATGCACCAAGAGAGGCTaGAGGAATGTGGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPCTKRG*RNVASF
Trigger: GAAAGATGCCACATTCCTGCAGCCTCTCTTGGTGCA...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTCTGAGCTCCTTAAGATaGTCCAAAGCTCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKALSSLR*SKAQLC
Trigger: ACACAGCTGAGCTTTGGAGCATCTTAAGGAGCTCAG...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCTCTTTCTGGCTGAAATaGAAGAGTTGTTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSSFWLK*KSCLLS
Trigger: GCTCAGCAAACAACTCTTGCATTTCAGCCAGAAAGA...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTAATGGCATATGGTCATaGTCGCTGAGCTGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPNGIWS*SLSCAS
Trigger: ACTAGCACAGCTCAGCGAGCATGACCATATGCCATT...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GACCAACCTGGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCCATAGACACTGGCGATaGAGTCACCCTTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: DQPGGQTQSFISPLYTSTHRHWR*SHPSQP
Trigger: TGGCTGAGAAGGGTGACTGCATCGCCAGTGTCTATG...GGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCCAGGTTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCTTGAACAGCTCACCCTaGAGGTCAGTGCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSALNSSP*RSVPLG
Trigger: TCCCAAGGGCACTGACCTGCAGGGTGAGCTGTTCAA...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTCTGATCAACGATCCTTaGCAACCCGAAATCCCCAAT +
Preference number: 4 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKALINDP*QPEIPN
Trigger: ATTGGGGATTTCGGGTTGGCAAGGATCGTTGATCAG...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TGCTCAAGCCTAGCCCTCTGCCGTGTGGGGTATGGGTCCGGTTTTCTATTGAACCTGATCAACGATCCTTaGCAACCCGAAATCCCCAAT +
Preference number: 4 (lower is better)
Translates to: CSSLALCRVGYGSGFLLNLINDP*QPEIPN
Trigger: ATTGGGGATTTCGGGTTGGCAAGGATCGTTGATCAG...GTTCAATAGAAAACCGGACCCATACCCCACACGGCAGAGGGCTAGGCTTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCACTTCAGGGAGCAGCTTaGGCAGAGGCCTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPLQGAA*AEASSP
Trigger: AGGTGAAGAGGCCTCTGCGCAAGCTGCTCCCTGAAG...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR GCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAATGGACGAGTGCGACTaGTCTAGGAAGCGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPMDECD*SRKRSE
Trigger: CTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCAT...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAGTGCTCTTGACCCACTaGGCGATCTCCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPVLLTH*AISRKR
Trigger: CCTCTTCCTGGAGATCGCGCAGTGGGTCAAGAGCAC...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAGCCGTTTCTTCCCTGTaGACCACATGTGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPAVSSL*TTCGLP
Trigger: GGGGAGACCACATGTGGTGCACAGGGAAGAAACGGC...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTAGAGGGCTGTGTCTTTaGGTGTCAGGAAAGTGCATA +
Preference number: 4 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPRGLCL*VSGKCI
Trigger: TATGCACTTTCCTGACACGCAAAGACACAGCCCTCT...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCGTCATGAGGTCTCCATaGTGGTGCCTGACCCCTAAG +
Preference number: 4 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTVMRSP*WCLTPK
Trigger: CTTAGGGGTCAGGCACCAGCATGGAGACCTCATGAC...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AGTGATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGAGGCTGCAGGAATGTaGCATCTTTCAGACCAAGTC +
Preference number: 4 (lower is better)
Translates to: SDQPLSQGPVQTRSHRLKEAAGM*HLSDQV
Trigger: GACTTGGTCTGAAAGATGCCACATTCCTGCAGCCTC...CTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACCTTAGCCTATGGAGCCTTTGGATGTaGGCAGCATCCTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: HALWVSTQVCMHQTHLSLWSLWM*AASSFT
Trigger: GGTGAAAGAGGATGCTGCCCACATCCAAAGGCTCCA...TAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp ACGTGGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCCCCAGGCCTCCACAAGAGGCTCTTTCTaGCTGAAATGCAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: TWPCGRRHETLVSEPQASTRGSF*LKCKSC
Trigger: ACAACTCTTGCATTTCAGCCAGAAAGAGCCTCTTGT...GGAGGCCTGGGGCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCCACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp AAAGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCGACGAGAATGGCATATaGTCATGCTCGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: KARTTPVEEDILWWTDPGDENGI*SCSLSC
Trigger: ACAGCTCAGCGAGCATGACCATATGCCATTCTCGTC...GCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTTGAGTCCCTTCCTTCCGAAGCCCAGGGGTTaGAAGTCAACAAAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: KLTLAYTMRGIAALSPFLPKPRG*KSTKRP
Trigger: TGGGCGCTTTGTTGACTTCCAACCCCTGGGCTTCGG...AAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TCCGGTTTTCTATTGAACATGCTATTCATGCTACCGTGTGGAAGCCGGACCCCTGTCTCCATGTACTCCTaGACGATGTACGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: SGFLLNMLFMLPCGSRTPVSMYS*TMYATL
Trigger: CAGCGTGGCGTACATCGTCCAGGAGTACATGGAGAC...AGGGGTCCGGCTTCCACACGGTAGCATGAATAGCATGTTCAATAGAAAACCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACTTGGACAGCTGGCTCTaGTTAGCGGCCATCAGCACG +
Preference number: 4 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANLDSWL*LAAIST
Trigger: CGTGCTGATGGCCGCTAACCAGAGCCAGCTGTCCAA...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAGGCTCACAGGGTACCTaGAACTGCACGTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPGSQGT*NCTCPS
Trigger: ACTGGGACACGTGCAGTTCCAGGTACCCTGTGAGCC...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CCA 90 bp TCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAATTGATGAAGGATGTTaGGTCCCATGTGAAACCTTC +
Preference number: 4 (lower is better)
Translates to: SSRSSDPSRVLPTPRQQRIDEGC*VPCETF
Trigger: GAAGGTTTCACATGGGACCCAACATCCTTCATCAAT...TCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CGACCATGCAGGGGTGAGGCAAATACAGGGGTGCGACAGATGAGAACATTTAAGTTACCCCATGCTCTGTaGGTGAGCACACAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: RPCRGEANTGVRQMRTFKLPHAL*VSTQVC
Trigger: GCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAA...CTTAAATGTTCTCATCTGTCGCACCCCTGTATTTGCCTCACCCCTGCATGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GGGGAAAGAGGGCTGTGTCTTTGCGTGTCAGGAAAGTGCATAGGGAGTGCTGAGTACCTGGAAACTGGCTaGACTTCCTGTGGGTATCTT +
Preference number: 4 (lower is better)
Translates to: GERGLCLCVSGKCIGSAEYLETG*TSCGYL
Trigger: AAGATACCCACAGGAAGTCCAGCCAGTTTCCAGGTA...CTCAGCACTCCCTATGCACTTTCCTGACACGCAAAGACACAGCCCTCTTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CTTTCTGTCCCCGACCTCTTCCCCCGAGGAGGGTGGAAACTTTCTCCGCCCTCCAATCGGGTGAATGAATaGAGTAAAAACGTTGAGCTA +
Preference number: 4 (lower is better)
Translates to: LSVPDLFPRGGWKLSPPSNRVNE*SKNVEL
Trigger: TAGCTCAACGTTTTTACTCCATTCATTCACCCGATT...GGAGGGCGGAGAAAGTTTCCACCCTCCTCGGGGGAAGAGGTCGGGGACAGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp CCTCTTCCCCCGAGGAGGGTGGAAACTTTCTCCGCCCTCCTAGCAAACTTTTCTTTAGATTCCAAAACCTaGGCCAGTCTGGTAAGCACT +
Preference number: 4 (lower is better)
Translates to: PLPPRRVETFSALLANFSLDSKT*ASLVST
Trigger: AGTGCTTACCAGACTGGCTCAGGTTTTGGAATCTAA...AGAAAAGTTTGCTAGGAGGGCGGAGAAAGTTTCCACCCTCCTCGGGGGAAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp AGGGGCGAGCCACGTGGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCAGAAACTCTCCCCTTTaGATACTTTGTTACAAGAGG +
Preference number: 4 (lower is better)
Translates to: RGEPRGHVVEDMRRWSLSRNSPL*ILCYKR
Trigger: CCTCTTGTAACAAAGTATTCAAAGGGGAGAGTTTCT...GCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCCACGTGGCTCGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp TTGAGGTCGCCCAGTTTATTGTCCGGCAGGTCCTCGGGCTTGGTGCAGAGCTTCAGAAACTCTCCCCTTTaGATACTTTGTTACAAGAGG +
Preference number: 4 (lower is better)
Translates to: LRSPSLLSGRSSGLVQSFRNSPL*ILCYKR
Trigger: CCTCTTGTAACAAAGTATTCAAAGGGGAGAGTTTCT...GAAGCTCTGCACCAAGCCCGAGGACCTGCCGGACAATAAACTGGGCGACCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR TCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCGGATGCACGCACCATTaGGGTCGCCCAGTTTATTGT +
Preference number: 4 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTGCTHH*GRPVYC
Trigger: ACAATAAACTGGGCGACCTCAATGGTGCGTGCATCC...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR TCA 90 bp AGTGATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGCAGGGGTGCGACAGATaGGAACATTTAAGTACTTGG +
Preference number: 4 (lower is better)
Translates to: SDQPLSQGPVQTRSHRLKQGCDR*EHLSTW
Trigger: CCAAGTACTTAAATGTTCTCATCTGTCGCACCCCTG...CTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCGACCCCAGGCTGTTCTaGCCTGAAACGAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: FQARPHTKPVILSECLCLDPRLF*PETKIS
Trigger: GGAAATCTTCGTTTCAGGTCAGAACAGCCTGGGGTC...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp CATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACCTTAGCCTAAGATTTAAGGTGCTGTaGTGTGAGGGTGAACGCAGC +
Preference number: 4 (lower is better)
Translates to: HALWVSTQVCMHQTHLSLRFKVL*CEGERS
Trigger: GCTGCGTTCACCCTCACATCACAGCACCTTAAATCT...TAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGGACAAAATGGCACATaGGGAGTGGTGTACATTTCT +
Preference number: 4 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPGQNGT*GVVYIS
Trigger: AGAAATGTACACCACTCCTCATGTGCCATTTTGTCC...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp ACATGCTATTCATGCTACCGTGTGGAAGCCGGACCCCTCAGGCTGCTAATCTTGCAAAAGGAACTTCCCTaGCTTCTCCCTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: TCYSCYRVEAGPLRLLILQKELP*LLPSQK
Trigger: CTTCTGAGAAGGGAGAAGTCAGGGAAGTTCCTTTTG...CAAGATTAGCAGCCTGAGGGGTCCGGCTTCCACACGGTAGCATGAATAGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp ATGCTATTCATGCTACCGTGTGGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCGGAGGGAATATTTGTTaGCATCCACTCTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: MLFMLPCGSRTPQAANLAGGNIC*HPLCTR
Trigger: CCTTGTACAGAGTGGATGTCAACAAATATTCCCTCC...GGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCCACACGGTAGCATGAATAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp AGAAATCTCAGGACAAAGGTAGTGTCTGTGCTCAAGCCTAGCCCTCTGCCGTGTATCCAGGTACATAACTaGGAGCACATTAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RNLRTKVVSVLKPSPLPCIQVHN*EHIREG
Trigger: CCCCTCCCTAATGTGCTCTCAGTTATGTACCTGGAT...ACACGGCAGAGGGCTAGGCTTGAGCACAGACACTACCTTTGTCCTGAGATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp GAGGAGTGGGTAATAATAACAGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGTTTATTGAGAAATTATaGTGTGCCAGGCACCGTGCC +
Preference number: 4 (lower is better)
Translates to: EEWVIITATCQVLTMCLGFIEKL*CARHRA
Trigger: GGCACGGTGCCTGGCACATCATAATTTCTCAATAAA...CCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGTTATTATTACCCACTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGATCTTTCTGGCTGAAATaGAAGAGTTGTTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRSFWLK*KSCLLS
Trigger: GCTCAGCAAACAACTCTTGCATTTCAGCCAGAAAGA...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCCATAGACACTGGCGATaGAGTCACCCTTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FQARPHTKPVILSECLCLHRHWR*SHPSQP
Trigger: TGGCTGAGAAGGGTGACTGCATCGCCAGTGTCTATG...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GATGATCAAACTCAGGAAAGTATTGATGAAGGATGTTGGGTCCCATGTGAAACCGCGCGTGCTTCATGCTaGGGGCATCGCTCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: DDQTQESIDEGCWVPCETARASC*GHRSGQ
Trigger: TTGCCCTGAGCGATGCCCGCAGCATGAAGCACGCGC...GGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GATGATCAAACTCAGGAAAGTATTGATGAAGGATGTTGGGTCCCATGTGAAACCCACCCTGCAGGTCAGTaGCCTTGGGACCGAGCACCT +
Preference number: 4 (lower is better)
Translates to: DDQTQESIDEGCWVPCETHPAGQ*PWDRAP
Trigger: AGGTGCTCGGTCCCAAGGGCACTGACCTGCAGGGTG...GGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TATGCCCATGAAATTCAGGAACTGACCACCAGTCAGGAGAAAATTAGCTCGAAGCTGCTCCAGCAGGCGTaGCAGGTCGGTCTCCATGTA +
Preference number: 4 (lower is better)
Translates to: YAHEIQELTTSQEKISSKLLQQA*QVGLHV
Trigger: TACATGGAGACCGACCTGGCACGCCTGCTGGAGCAG...CTTCGAGCTAATTTTCTCCTGACTGGTGGTCAGTTCCTGAATTTCATGGGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp AGACAGCTGAACAAACAAATGGATGATATGTCTAGTGGAGATAAGTGCAAGGAATCTGCCAGCGTGCCCTaGTCCAGCAGGCGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RQLNKQMDDMSSGDKCKESASVP*SSRRAR
Trigger: CCTGGCACGCCTGCTGGAGCAGGGCACGCTGGCAGA...TTCCTTGCACTTATCTCCACTAGACATATCATCCATTTGTTTGTTCAGCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAAGGATGAGTTGCATCTaGTCCAGCTCATGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPRMSCI*SSSWAP
Trigger: TGGGGCCCATGAGCTGGAGCAGATGCAACTCATCCT...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR GCA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACAGGATGAGTTGCATCTaGTCCAGCTCATGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANRMSCI*SSSWAP
Trigger: TGGGGCCCATGAGCTGGAGCAGATGCAACTCATCCT...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR GCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCCGATCTCATCCTCAATaGGGAAGGGGTGTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSARSHPQ*GRGVVR
Trigger: CCTCACAACACCCCTTCCGCATTGAGGATGAGATCG...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR GCA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACGTGGGGCCCGCAGACTaGTGTCTAAAGCCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANVGPAD*CLKPFL
Trigger: AAGAAACGGCTTTAGACAGCAGTCTGCGGGCCCCAC...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CCATTACCCCATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACGGAGCCAGGAAAGTATaGTTGGTGACTAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: PLPHALWVSTQVCMHQTHGARKV*LVTRRN
Trigger: GTTTCTCCTAGTCACCAAGCATACTTTCCTGGCTCC...GTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCATGCGTGTCAGGAAAGTaGATAGGGAGTGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPCVSGK*IGSAEG
Trigger: CCCCTCAGCACTCCCTATGCACTTTCCTGACACGCA...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCATCTCTGTAGGGTCTaGTGTTTGTCAAGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: ASAEGLCLHTITPCSVGEHLCRV*CLSRLN
Trigger: ATTTAGCCTTGACAAACAGCAGACCCTACAGAGATG...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCCCCAAGGTCACGACGTaGTCTCCAACACATCTCTGT +
Preference number: 4 (lower is better)
Translates to: FQARPHTKPVILSECLCLPKVTT*SPTHLC
Trigger: ACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGG...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCATCCTCTGGAGCCTTTaGATGTGGGCAGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTILWSL*MWAASS
Trigger: AGAGGATGCTGCCCACATCCAAAGGCTCCAGAGGAT...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GGGGAAAGAGGGCTGTGTCTTTGCGTGTCAGGAAAGTGCATAGGGAGTGCTGAGCGTCTTAACCTGCATTaGGAGGGCTGTCTACTAATT +
Preference number: 4 (lower is better)
Translates to: GERGLCLCVSGKCIGSAERLNLH*EGCLLI
Trigger: AATTAGTAGACAGCCCTCCCAATGCAGGTTAAGACG...CTCAGCACTCCCTATGCACTTTCCTGACACGCAAAGACACAGCCCTCTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp ACCCCTTCATCTAACTTCATTAACTCTATAGCAGGGGAGGCAGCGAGGGCTCCTCTCTGGAGACGAGAATaGCATATGGTCATGCTCGCT +
Preference number: 4 (lower is better)
Translates to: TPSSNFINSIAGEAARAPLWRRE*HMVMLA
Trigger: AGCGAGCATGACCATATGCCATTCTCGTCTCCAGAG...AGGAGCCCTCGCTGCCTCCCCTGCTATAGAGTTAATGAAGTTAGATGAAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp CGACCATGCAGGGGTGAGGCAAATACAGGGGTGCGACAGATGAGAACATTTAAGCATACCCATAGACACTaGCGATGCAGTCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: RPCRGEANTGVRQMRTFKHTHRH*RCSHPS
Trigger: AGAAGGGTGACTGCATCGCCAGTGTCTATGGGTATG...CTTAAATGTTCTCATCTGTCGCACCCCTGTATTTGCCTCACCCCTGCATGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CCATTACCCCATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACTACCTGGAAACTGGCTaGACTTCCTGTGGGTATCTT +
Preference number: 4 (lower is better)
Translates to: PLPHALWVSTQVCMHQTHYLETG*TSCGYL
Trigger: AAGATACCCACAGGAAGTCCAGCCAGTTTCCAGGTA...GTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCCCTCTACCTGGAAACTaGCTGGACTTCCTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSAPLPGN*LDFLWV
Trigger: TACCCACAGGAAGTCCAGCCAGTTTCCAGGTAGAGG...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AGAAATCTCAGGACAAAGGTAGTGTCTGTGCTCAAGCCTAGCCCTCTGCCGTGTCTGCCGTGTGGGGTATaGGTCCGGTTTTCTATTGAA +
Preference number: 4 (lower is better)
Translates to: RNLRTKVVSVLKPSPLPCLPCGV*VRFSIE
Trigger: TTCAATAGAAAACCGGACCCATACCCCACACGGCAG...ACACGGCAGAGGGCTAGGCTTGAGCACAGACACTACCTTTGTCCTGAGATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
3UTR CAA 72 bp CTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTaGAGTCCCTTCCTTTGTCATGAGGTCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LTLAYTMRGIAA*SPFLCHEVSML
Trigger: CAGCATGGAGACCTCATGACAAAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp AGGGTGGAAACTTTCTCCGCCCTCCTAGCAAACTTTTCTCTCAGCTCCCTTATTACACCAAGTTACGCCTaGGGTTCCAAATGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RVETFSALLANFSLSSLITPSYA*GSKCRG
Trigger: TCCCCTGCATTTGGAACCTCAGGCGTAACTTGGTGT...AATAAGGGAGCTGAGAGAAAAGTTTGCTAGGAGGGCGGAGAAAGTTTCCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp AAAGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCTTAGATTCCAAAACCTaGGCCAGTCTGGTAAGCACT +
Preference number: 4 (lower is better)
Translates to: KARTTPVEEDILWWTDPGLDSKT*ASLVST
Trigger: AGTGCTTACCAGACTGGCTCAGGTTTTGGAATCTAA...GCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp AGGGTGGAAACTTTCTCCGCCCTCCTAGCAAACTTTTCTCTCAGCTCCCTTATTGCACCTCGTACACTTTaGCGATGTTGTCGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RVETFSALLANFSLSSLIAPRTL*RCCRGP
Trigger: TGGACCACGACAACATCGTCAAAGTGTACGAGGTGC...AATAAGGGAGCTGAGAGAAAAGTTTGCTAGGAGGGCGGAGAAAGTTTCCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp GATGATCAAACTCAGGAAAGTATTGATGAAGGATGTTGGGTCCCATGTGAAACCTCAGGGCGCGGGAGATaGACACGTCCAGGTCGAACT +
Preference number: 4 (lower is better)
Translates to: DDQTQESIDEGCWVPCETSGRGR*TRPGRT
Trigger: AGTTCGACCTGGACGTGTTCATCTCCCGCGCCCTGA...GGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCTTTGCTAGGAAAGTaGTCAACCCCTAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANPLLGK*STPKPG
Trigger: CCCTGGCTTAGGGGTTGATCACTTTCCTAGCAAAGG...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR TCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCTGTTACCAACCCTTCTaGCAGATAACCCGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSACYQPF*QITRGR
Trigger: TCTGCCTCGGGTTATCTGTCAGAAGGGTTGGTAACA...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540640.3
CDS-3UTR GCA 90 bp CCCAGCAGTGAGCAAAACAAAGTCCCTGTAATCATGAGGTGCACACTTTGGATGGCTGTCGTCTTAACCTaGATTGGGAGGGCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: PSSEQNKVPVIMRCTLWMAVVLT*IGRAVY
Trigger: GTAGACAGCCCTCCCAATGCAGGTTAAGACGACAGC...CATCCAAAGTGTGCACCTCATGATTACAGGGACTTTGTTTTGCTCACTGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAATCCTTCACGTGTTCTaGCAACCCCAAGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPILHVF*QPQGSR
Trigger: TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGAT...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR GCA 90 bp TCTCCTAACACATTTGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAATGAGCCACTATGAGGGGCATTaGTGCTTTGAGTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPNTFALWQDLTAVLQMSHYEGH*CFESLP
Trigger: AGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTG...GCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GGGGAAAGAGGGCTGTGTCTTTGCGTGTCAGGAAAGTGCATAGGGAGTGCTGAGACAAGAGGCTCTTTCTaGCTGAAATGCAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: GERGLCLCVSGKCIGSAETRGSF*LKCKSC
Trigger: ACAACTCTTGCATTTCAGCCAGAAAGAGCCTCTTGT...CTCAGCACTCCCTATGCACTTTCCTGACACGCAAAGACACAGCCCTCTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TCCGGTTTTCTATTGAACATGCTATTCATGCTACCGTGTGGAAGCCGGACCCCTGACGAGAATGGCATATaGTCATGCTCGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SGFLLNMLFMLPCGSRTPDENGI*SCSLSC
Trigger: ACAGCTCAGCGAGCATGACCATATGCCATTCTCGTC...AGGGGTCCGGCTTCCACACGGTAGCATGAATAGCATGTTCAATAGAAAACCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACTTGACGATGTTGTCGTaGTCCAGGCGCCGAATGATC +
Preference number: 4 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANLTMLS*SRRRMI
Trigger: GATCATTCGGCGCCTGGACCACGACAACATCGTCAA...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CCATTACCCCATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACTCTCCAGAAAGTCGATaGCTTCACTGTTCACTTCAG +
Preference number: 4 (lower is better)
Translates to: PLPHALWVSTQVCMHQTHSPESR*LHCSLQ
Trigger: CTGAAGTGAACAGTGAAGCCATCGACTTTCTGGAGA...GTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS-3UTR CCA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCTCACCACCTTTCTTTaGAGAAGGCCTCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANLTTFL*RRPRSA
Trigger: TGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAG...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGTTTAAGAAATaGACATTCCTCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPRQFKK*TFLSLL
Trigger: GAGGAGCGAGAGGAATGTCCATTTCTTAAACTGCCT...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CCA 90 bp AAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTTGAGTCCCTTCCTTTTACCCCATGCTCTGTaGGTGAGCACACAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: KLTLAYTMRGIAALSPFLLPHAL*VSTQVC
Trigger: GCAAACCTGTGTGCTCACCCACAGAGCATGGGGTAA...AAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TCTCCTAACACATTTGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAATGAGCATGGTAGAATGTTCCTaGGGACCAGATAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPNTFALWQDLTAVLQMSMVECS*GPDRGC
Trigger: ACAGCCCCTATCTGGTCCCCAGGAACATTCTACCAT...GCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACCTTAGCCTACCTCTGAGGACAAAATaGCACATGAGGAGTGGTGTA +
Preference number: 4 (lower is better)
Translates to: HALWVSTQVCMHQTHLSLPLRTK*HMRSGV
Trigger: TACACCACTCCTCATGTGCCATTTTGTCCTCAGAGG...TAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CAA 72 bp GTTGGGTCCCATGTGAAACCTTCTCTCCTAACACATTaGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: VGSHVKPSLLTH*LYGRTSLLSSK
Trigger: TTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGAGAAGGTTTCACATGGGACCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TATGCCCATGAAATTCAGGAACTGACCACCAGTCAGGAGAAAATTAGCTCGAAGCGAAATCCCCAATCTTaGGCACGAGGTCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: YAHEIQELTTSQEKISSKRNPQS*ARGPLC
Trigger: GCACAGAGGACCTCGTGCTCAAGATTGGGGATTTCG...CTTCGAGCTAATTTTCTCCTGACTGGTGGTCAGTTCCTGAATTTCATGGGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCTGTTACCAACCCTTCTaGCAGATAACCCTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTCYQPF*QITLVG
Trigger: TCCCACAAGGGTTATCTGTCAGAAGGGTTGGTAACA...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCATCAAGGCTAAATGGATaGTCAAACTCAGGAAAGTAT +
Preference number: 4 (lower is better)
Translates to: TFLSLLGSFTCSANPKAASRLNG*SNSGKY
Trigger: ATACTTTCCTGAGTTTGATCATCCATTTAGCCTTGA...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGATCAAGGCTAAATGGATaGTCAAACTCAGGAAAGTAT +
Preference number: 4 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRSRLNG*SNSGKY
Trigger: ATACTTTCCTGAGTTTGATCATCCATTTAGCCTTGA...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AGGGTGGAAACTTTCTCCGCCCTCCTAGCAAACTTTTCTCTCAGCTCCCTTATTTGCACCAAGAGAGGCTaGAGGAATGTGGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: RVETFSALLANFSLSSLICTKRG*RNVASF
Trigger: GAAAGATGCCACATTCCTGCAGCCTCTCTTGGTGCA...AATAAGGGAGCTGAGAGAAAAGTTTGCTAGGAGGGCGGAGAAAGTTTCCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp TCTCCTAACACATTTGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAATGAGCCTGAGCTCCTTAAGATaGTCCAAAGCTCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SPNTFALWQDLTAVLQMSLSSLR*SKAQLC
Trigger: ACACAGCTGAGCTTTGGAGCATCTTAAGGAGCTCAG...GCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CCCGCAGACTGCTGTCTAAAGCCGTTTCTTCCCTGTGCACCACATGTGGTCTCCTCTACCATAGTGGACTaGAAAGTAAAAGATGCAGAA +
Preference number: 4 (lower is better)
Translates to: PADCCLKPFLPCAPHVVSSTIVD*KVKDAE
Trigger: TTCTGCATCTTTTACTTTGCAGTCCACTATGGTAGA...GGAGACCACATGTGGTGCACAGGGAAGAAACGGCTTTAGACAGCAGTCTGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCGGAGCCAGGAAAGTATaGTTGGTGACTAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: FQARPHTKPVILSECLCLGARKV*LVTRRN
Trigger: GTTTCTCCTAGTCACCAAGCATACTTTCCTGGCTCC...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TCTCCTAACACATTTGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAATGAGCGATTCTTGGAATTGGTaGCTTCAACCTCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: SPNTFALWQDLTAVLQMSDSWNW*LQPHWG
Trigger: ACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATC...GCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TCTCCTAACACATTTGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAATGAGCGTGAGCACACAGGTTTaGATGCACCAAACTCACCTT +
Preference number: 4 (lower is better)
Translates to: SPNTFALWQDLTAVLQMSVSTQV*MHQTHL
Trigger: AAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCAC...GCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AGGGTGGAAACTTTCTCCGCCCTCCTAGCAAACTTTTCTCTCAGCTCCCTTATTCCCATCAATGAATTCTaGAGGCATCCAGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RVETFSALLANFSLSSLIPINEF*RHPGAS
Trigger: AGAAGCCCCTGGATGCCTCCAGAATTCATTGATGGG...AATAAGGGAGCTGAGAGAAAAGTTTGCTAGGAGGGCGGAGAAAGTTTCCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp ACCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTTTAAAGCTGGCATCTTaGAAAGAAAACCCAGTATCA +
Preference number: 4 (lower is better)
Translates to: TPRFCRGPVSTHHYPMLCLKLAS*KENPVS
Trigger: TGATACTGGGTTTTCTTTCCAAGATGCCAGCTTTAA...ACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTTGAGTCCCTTCCTTCTCTGGAGACGAGAATaGCATATGGTCATGCTCGCT +
Preference number: 4 (lower is better)
Translates to: KLTLAYTMRGIAALSPFLLWRRE*HMVMLA
Trigger: AGCGAGCATGACCATATGCCATTCTCGTCTCCAGAG...AAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACCTTAGCCTAAGGCAGTTTAAGAAATaGACATTCCTCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: HALWVSTQVCMHQTHLSLRQFKK*TFLSLL
Trigger: GAGGAGCGAGAGGAATGTCCATTTCTTAAACTGCCT...TAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCCCTCTGAGGACAAAATaGCACATGAGGAGTGGTGTA +
Preference number: 4 (lower is better)
Translates to: FQARPHTKPVILSECLCLPLRTK*HMRSGV
Trigger: TACACCACTCCTCATGTGCCATTTTGTCCTCAGAGG...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CTAGTTGGGCCAGATGGTTTCGGAGCTACCTCTGCAAGATTTCTCGGCATCCTGTTATATATGAACTCCTaGTCAAGGCCAGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LVGPDGFGATSARFLGILLYMNS*SRPAAC
Trigger: ACAAGCTGCTGGCCTTGACCAGGAGTTCATATATAA...CAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCGAAACCATCTGGCCCAACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp GGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCCTCAAAAAGCACAAGCACCTTTCATaGGCTCTACACCAAGTTACG +
Preference number: 4 (lower is better)
Translates to: GGQTQSFISPLYTSTLKKHKHLS*ALHQVT
Trigger: CGTAACTTGGTGTAGAGCTCATGAAAGGTGCTTGTG...CTTTTTGAGGGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACTATGAGGGGCATTGCTaGTTTGAGTCCCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANYEGHC*FESLPL
Trigger: CAAAGGAAGGGACTCAAAGCAGCAATGCCCCTCATA...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp CCCAGCAGTGAGCAAAACAAAGTCCCTGTAATCATGAGGTGCACACTTTGGATGATTTGGGGATATTACTaGAGGACCCTCCTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: PSSEQNKVPVIMRCTLWMIWGYY*RTLLSD
Trigger: GTCAGAGAGGAGGGTCCTGCAGTAATATCCCCAAAT...CATCCAAAGTGTGCACCTCATGATTACAGGGACTTTGTTTTGCTCACTGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp CAGAATACAAGAAACATTGCTCTGAATAAAAGAACATCGAATGGTAATGGACAGGCAGGTCCTCGGGCTTaGTGCAGAGCTTCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: QNTRNIALNKRTSNGNGQAGPRA*CRASGR
Trigger: GCGCCCTGAAGCTCTGCACCAAGCCCGAGGACCTGC...CTGTCCATTACCATTCGATGTTCTTTTATTCAGAGCAATGTTTCTTGTATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCACTAGGAGAAACAAACTaGTTCAGTTTCCAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPLGETN*FSFQFQ
Trigger: CTGAAACTGGAAACTGAACCAGTTTGTTTCTCCTAG...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACAACACATTTGCTCTATaGCAGGACCTCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANNTFAL*QDLTAV
Trigger: GACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTT...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TCCTTGCCCCCAAGGTCACGACGTGCTCTCCAACACATCTCTGTAGGGTCTGCTTTTGTCAAGGCTAAATaGATGATCAAACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SLPPRSRRALQHISVGSAFVKAK*MIKLRK
Trigger: TTTCCTGAGTTTGATCATCCATTTAGCCTTGACAAA...AGCAGACCCTACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGGGGCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAATCTTCCTACCTTTCTaGATTCCTTGCCCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPIFLPF*IPCPQG
Trigger: ACCTTGGGGGCAAGGAATCCAGAAAGGTAGGAAGAT...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TCTCAGACCAAGTTTCTAACAAAAAGCCAGAACGACCCCAGTAGAGGAAGACATCAGCCCAAGACCAACTaGTGGAATCCTCTACCTGGA +
Preference number: 4 (lower is better)
Translates to: SQTKFLTKSQNDPSRGRHQPKTN*WNPLPG
Trigger: TCCAGGTAGAGGATTCCACCAGTTGGTCTTGGGCTG...ATGTCTTCCTCTACTGGGGTCGTTCTGGCTTTTTGTTAGAAACTTGGTCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTATGGCACATGAGGAGTaGTGTACATTTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKAMAHEE*CTFLFL
Trigger: AAGAAAAAGAAATGTACACCACTCCTCATGTGCCAT...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TTTGCCAGCAGTAGCTCAGCTCACCTCCTGAGAACCCTGTTGAAGGTATTTATTGCAAGAGTTGTTTGCTaGGCTGAGCTCCTTAAGATG +
Preference number: 4 (lower is better)
Translates to: FASSSSAHLLRTLLKVFIARVVC*AELLKM
Trigger: CATCTTAAGGAGCTCAGCTCAGCAAACAACTCTTGC...AATAAATACCTTCAACAGGGTTCTCAGGAGGTGAGCTGAGCTACTGCTGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp GACCAACCTGGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCTCACTTACAATCGGGTaGATGAATGGAGTAAAAACG +
Preference number: 4 (lower is better)
Translates to: DQPGGQTQSFISPLYTSTSLTIG*MNGVKT
Trigger: CGTTTTTACTCCATTCATTCACCCGATTGTAAGTGA...GGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCCAGGTTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp AAAGTATGCTTGGTGACTAGGAGAAACAAACTGGTTCAGTTTCCAGTTTCAGAAATGGACGAGTGCGACTaGTCTAGGAAGCGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: KVCLVTRRNKLVQFPVSEMDECD*SRKRSE
Trigger: CTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCAT...TTCTGAAACTGGAAACTGAACCAGTTTGTTTCTCCTAGTCACCAAGCATACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCATTAAAGCTGGCATCTTaGAAAGAAAACCCAGTATCA +
Preference number: 4 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPLKLAS*KENPVS
Trigger: TGATACTGGGTTTTCTTTCCAAGATGCCAGCTTTAA...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp GGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCCTCAAAAAGCGTCTTAACCTGCATTaGGAGGGCTGTCTACTAATT +
Preference number: 4 (lower is better)
Translates to: GGQTQSFISPLYTSTLKKRLNLH*EGCLLI
Trigger: AATTAGTAGACAGCCCTCCCAATGCAGGTTAAGACG...CTTTTTGAGGGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp TCTCCTAACACATTTGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAATGAGCGAACATTTAAGTACTTaGGGAGCCAGGAAAGTATGC +
Preference number: 4 (lower is better)
Translates to: SPNTFALWQDLTAVLQMSEHLST*GARKVC
Trigger: GCATACTTTCCTGGCTCCCCAAGTACTTAAATGTTC...GCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCATTGATGAAGGATGTTaGGTCCCATGTGAAACCTTC +
Preference number: 4 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSAIDEGC*VPCETF
Trigger: GAAGGTTTCACATGGGACCCAACATCCTTCATCAAT...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp TCTCAGACCAAGTTTCTAACAAAAAGCCAGAACGACCCCAGTAGAGGAAGACATTCCTGTGGGTATCTTTaGGAGTGTTGGGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SQTKFLTKSQNDPSRGRHSCGYL*ECWGKR
Trigger: TCTCTTCCCCCAACACTCCCAAAGATACCCACAGGA...ATGTCTTCCTCTACTGGGGTCGTTCTGGCTTTTTGTTAGAAACTTGGTCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TCTCAGACCAAGTTTCTAACAAAAAGCCAGAACGACCCCAGTAGAGGAAGACATCACAAGCACCTTTCATaGGCTCTACACCAAGTTACG +
Preference number: 4 (lower is better)
Translates to: SQTKFLTKSQNDPSRGRHHKHLS*ALHQVT
Trigger: CGTAACTTGGTGTAGAGCTCATGAAAGGTGCTTGTG...ATGTCTTCCTCTACTGGGGTCGTTCTGGCTTTTTGTTAGAAACTTGGTCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCAGAAACTCTCCCCTTTaGATACTTTGTTACAAGAGG +
Preference number: 4 (lower is better)
Translates to: FQARPHTKPVILSECLCLRNSPL*ILCYKR
Trigger: CCTCTTGTAACAAAGTATTCAAAGGGGAGAGTTTCT...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AGACAGCTGAACAAACAAATGGATGATATGTCTAGTGGAGATAAGTGCAAGGAATTGAACAGCTCACCCTaGAGGTCAGTGCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RQLNKQMDDMSSGDKCKELNSSP*RSVPLG
Trigger: TCCCAAGGGCACTGACCTGCAGGGTGAGCTGTTCAA...TTCCTTGCACTTATCTCCACTAGACATATCATCCATTTGTTTGTTCAGCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp TCTCAGACCAAGTTTCTAACAAAAAGCCAGAACGACCCCAGTAGAGGAAGACATGAAGATTTCCGACCATaGAGGGGTGAGGCAAATACA +
Preference number: 4 (lower is better)
Translates to: SQTKFLTKSQNDPSRGRHEDFRP*RGEANT
Trigger: TGTATTTGCCTCACCCCTGCATGGTCGGAAATCTTC...ATGTCTTCCTCTACTGGGGTCGTTCTGGCTTTTTGTTAGAAACTTGGTCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp GGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCCTCAAAAAGCCTGTAATCATGAGGTaGACACTTTGGATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: GGQTQSFISPLYTSTLKKPVIMR*TLWMER
Trigger: TCTTTCCATCCAAAGTGTGCACCTCATGATTACAGG...CTTTTTGAGGGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp GACCAACCTGGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCTTAAAGCTGGCATCTTaGAAAGAAAACCCAGTATCA +
Preference number: 4 (lower is better)
Translates to: DQPGGQTQSFISPLYTSTLKLAS*KENPVS
Trigger: TGATACTGGGTTTTCTTTCCAAGATGCCAGCTTTAA...GGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCCAGGTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp AAAGTATGCTTGGTGACTAGGAGAAACAAACTGGTTCAGTTTCCAGTTTCAGAACTCAGGGCACGAGTATaGGCTCATGTAGGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: KVCLVTRRNKLVQFPVSELRARV*AHVGVL
Trigger: CAACACCCCTACATGAGCCCATACTCGTGCCCTGAG...TTCTGAAACTGGAAACTGAACCAGTTTGTTTCTCCTAGTCACCAAGCATACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS-3UTR CCA 90 bp AGACAGCTGAACAAACAAATGGATGATATGTCTAGTGGAGATAAGTGCAAGGAAATCCTCTGGAGCCTTTaGATGTGGGCAGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: RQLNKQMDDMSSGDKCKEILWSL*MWAASS
Trigger: AGAGGATGCTGCCCACATCCAAAGGCTCCAGAGGAT...TTCCTTGCACTTATCTCCACTAGACATATCATCCATTTGTTTGTTCAGCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp CAGAATACAAGAAACATTGCTCTGAATAAAAGAACATCGAATGGTAATGGACAGAGCCCGCGGAGCAGCTaGTACATGAACAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QNTRNIALNKRTSNGNGQSPRSS*YMNSLA
Trigger: TGCCAAGCTGTTCATGTACCAGCTGCTCCGCGGGCT...CTGTCCATTACCATTCGATGTTCTTTTATTCAGAGCAATGTTTCTTGTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AAAGTATGCTTGGTGACTAGGAGAAACAAACTGGTTCAGTTTCCAGTTTCAGAAATCTGCTCCAGCTCATaGGCCCCAGCAAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: KVCLVTRRNKLVQFPVSEICSSS*APAKSI
Trigger: AATGCTCTTTGCTGGGGCCCATGAGCTGGAGCAGAT...TTCTGAAACTGGAAACTGAACCAGTTTGTTTCTCCTAGTCACCAAGCATACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS-3UTR TCA 90 bp TATGCCCATGAAATTCAGGAACTGACCACCAGTCAGGAGAAAATTAGCTCGAAGGGTCCGGTTTTCTATTaGACATGCTATTCATGCTAC +
Preference number: 4 (lower is better)
Translates to: YAHEIQELTTSQEKISSKGPVFY*TCYSCY
Trigger: GTAGCATGAATAGCATGTTCAATAGAAAACCGGACC...CTTCGAGCTAATTTTCTCCTGACTGGTGGTCAGTTCCTGAATTTCATGGGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp AAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTTGAGTCCCTTCCTTTCTACCATAGTGGACTaGAAAGTAAAAGATGCAGAA +
Preference number: 4 (lower is better)
Translates to: KLTLAYTMRGIAALSPFLSTIVD*KVKDAE
Trigger: TTCTGCATCTTTTACTTTGCAGTCCACTATGGTAGA...AAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp AGACAGCTGAACAAACAAATGGATGATATGTCTAGTGGAGATAAGTGCAAGGAAGAGGCTGCAGGAATGTaGCATCTTTCAGACCAAGTC +
Preference number: 4 (lower is better)
Translates to: RQLNKQMDDMSSGDKCKEEAAGM*HLSDQV
Trigger: GACTTGGTCTGAAAGATGCCACATTCCTGCAGCCTC...TTCCTTGCACTTATCTCCACTAGACATATCATCCATTTGTTTGTTCAGCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp AAAGTATGCTTGGTGACTAGGAGAAACAAACTGGTTCAGTTTCCAGTTTCAGAACATACCCATAGACACTaGCGATGCAGTCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: KVCLVTRRNKLVQFPVSEHTHRH*RCSHPS
Trigger: AGAAGGGTGACTGCATCGCCAGTGTCTATGGGTATG...TTCTGAAACTGGAAACTGAACCAGTTTGTTTCTCCTAGTCACCAAGCATACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
3UTR CAA 72 bp GAACATTTAAGTACTTGGGGAGCCAGGAAAGTATGCTaGGTGACTAGGAGAAACAAACTGGTTCAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: EHLSTWGARKVC*VTRRNKLVQFP
Trigger: TGGAAACTGAACCAGTTTGTTTCTCCTAGTCACCAAGCATACTTTCCTGGCTCCCCAAGTACTTAAATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR TCA 90 bp TATGCCCATGAAATTCAGGAACTGACCACCAGTCAGGAGAAAATTAGCTCGAAGGTCCAAAAGCACTTTTaGGGAGTGGGTAATAATAAC +
Preference number: 4 (lower is better)
Translates to: YAHEIQELTTSQEKISSKVQKHF*GVGNNN
Trigger: GTTATTATTACCCACTCCTCAAAAGTGCTTTTGGAC...CTTCGAGCTAATTTTCTCCTGACTGGTGGTCAGTTCCTGAATTTCATGGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR GCA 90 bp GATGATCAAACTCAGGAAAGTATTGATGAAGGATGTTGGGTCCCATGTGAAACCCATCTCTGTAGGGTCTaGTGTTTGTCAAGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: DDQTQESIDEGCWVPCETHLCRV*CLSRLN
Trigger: ATTTAGCCTTGACAAACAGCAGACCCTACAGAGATG...GGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CCA 90 bp CAGAATACAAGAAACATTGCTCTGAATAAAAGAACATCGAATGGTAATGGACAGCTCACCACCTTTCTTTaGAGAAGGCCTCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QNTRNIALNKRTSNGNGQLTTFL*RRPRSA
Trigger: TGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAG...CTGTCCATTACCATTCGATGTTCTTTTATTCAGAGCAATGTTTCTTGTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp TATGCCCATGAAATTCAGGAACTGACCACCAGTCAGGAGAAAATTAGCTCGAAGTCTACCATAGTGGACTaGAAAGTAAAAGATGCAGAA +
Preference number: 4 (lower is better)
Translates to: YAHEIQELTTSQEKISSKSTIVD*KVKDAE
Trigger: TTCTGCATCTTTTACTTTGCAGTCCACTATGGTAGA...CTTCGAGCTAATTTTCTCCTGACTGGTGGTCAGTTCCTGAATTTCATGGGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CCA 90 bp CAGAATACAAGAAACATTGCTCTGAATAAAAGAACATCGAATGGTAATGGACAGCCCATCAATGAATTCTaGAGGCATCCAGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QNTRNIALNKRTSNGNGQPINEF*RHPGAS
Trigger: AGAAGCCCCTGGATGCCTCCAGAATTCATTGATGGG...CTGTCCATTACCATTCGATGTTCTTTTATTCAGAGCAATGTTTCTTGTATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR GCA 90 bp AGACAGCTGAACAAACAAATGGATGATATGTCTAGTGGAGATAAGTGCAAGGAAAGCTCGAAGTTTCATTaGCATGTAGAAATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RQLNKQMDDMSSGDKCKESSKFH*HVEISG
Trigger: TCCTGAGATTTCTACATGGCAATGAAACTTCGAGCT...TTCCTTGCACTTATCTCCACTAGACATATCATCCATTTGTTTGTTCAGCTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR TCA 90 bp CAGAATACAAGAAACATTGCTCTGAATAAAAGAACATCGAATGGTAATGGACAGAATAACAGTTATATATaGACTCCTGGTCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QNTRNIALNKRTSNGNGQNNSYI*TPGQGQ
Trigger: CTGGCCTTGACCAGGAGTTCATATATAACTGTTATT...CTGTCCATTACCATTCGATGTTCTTTTATTCAGAGCAATGTTTCTTGTATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS CCA 90 bp GGCGCCGAACCCGCGCGCGGGTCGCGCTGTACCTCGCTGGCGTCCTaGCACCGGTCAGGCCGCCACTCCAGGTCCGACGACAGGCTCACA +
Preference number: 5 (lower is better)
Translates to: GAEPARGSRCTSLAS*HRSGRHSRSDDRLT
Trigger: TGTGAGCCTGTCGTCGGACCTGGAGTGGCGGCCTGACCGGTGCCAGGACGCCAGCGAGGTACAGCGCGACCCGCGCGCGGGTTCGGCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CAA 90 bp CCGCGCGCGGGTCGCGCTGTACCTCGCTGGCGTCCTGGCACCGGTCAGGCCGCCAGCACCTCGTACACTTaGACGATGTTGTCGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PRAGRAVPRWRPGTGQAASTSYT*TMLSWS
Trigger: GGACCACGACAACATCGTCAAAGTGTACGAGGTGCT...GGCGGCCTGACCGGTGCCAGGACGCCAGCGAGGTACAGCGCGACCCGCGCGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CAA 90 bp AAGAGGCTGGCCGGCTCGTCCTCGCGCGCCCCCGTGTCCGCCAGCCCCGTGGCCAGGTTGGAGGGATTCTaGGAATTGGTGCCTTCAACC +
Preference number: 5 (lower is better)
Translates to: KRLAGSSSRAPVSASPVARLEGF*ELVPST
Trigger: GGTTGAAGGCACCAATTCCAAGAATCCCTCCAACCT...GGCCACGGGGCTGGCGGACACGGGGGCGCGCGAGGACGAGCCGGCCAGCCTCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CAA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGCTGCTGTGCGAGTCCTaGCGCGGGTCCACCTGCACG +
Preference number: 5 (lower is better)
Translates to: LAPRILHVFCQPQGSREGLLCES*RGSTCT
Trigger: CGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCAG...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS TCA 90 bp CCTTCCGGCAGGCCCGGCTGTCCACGGCCGACAGCACCAAACCATTaGCACCGAAGCCCAGGGGTTGGAAGTCAACAAAGCGCCCACCGA +
Preference number: 5 (lower is better)
Translates to: PSGRPGCPRPTAPNH*HRSPGVGSQQSAHR
Trigger: TCGGTGGGCGCTTTGTTGACTTCCAACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGTCGGCCGTGGACAGCCGGGCCTGCCGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CCA 90 bp GGGGAGCTCAGCTGCCAGGCCAGGATCCTCTGGAGCCTTTGGATGTaGGCAGCATCCTCTTTCACCAGCTCATCCACGCCACCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: GELSCQARILWSLWM*AASSFTSSSTPPRP
Trigger: TGGGCGAGGTGGCGTGGATGAGCTGGTGAAAGAGGATGCTGCCCACATCCAAAGGCTCCAGAGGATCCTGGCCTGGCAGCTGAGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS-3UTR CAA 90 bp GGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCTGGGACCAACCTGGAGGTCAGTGCAGGTCAGTGCCCTaGGGACCGAGCACCTCGTAC +
Preference number: 5 (lower is better)
Translates to: GSRTPQAANLAWDQPGGQCRSVP*GPSTSY
Trigger: GTACGAGGTGCTCGGTCCCAAGGGCACTGACCTGCA...CTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp CCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGCAGGTCCTCGGGCTaGGTGCAGAGCTTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: PHASAEGLCLHTITPCSVGRSSG*VQSFRA
Trigger: CGCCCTGAAGCTCTGCACCAAGCCCGAGGACCTGCC...CACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCGGCAGGTCCTCGGGCTaGGTGCAGAGCTTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSGRSSG*VQSFRA
Trigger: CGCCCTGAAGCTCTGCACCAAGCCCGAGGACCTGCC...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CAA 90 bp CGGCCCCTCCGCCCTCACCACCTTTCTTTGGAGAAGGCCTCGGTCTGCACGAGGCCTCACCACCTTTCTTaGGAGAAGGCCTCGGTCTGC +
Preference number: 5 (lower is better)
Translates to: RPLRPHHLSLEKASVCTRPHHLS*EKASVC
Trigger: GCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGG...CCTCGTGCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGGGCGGAGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CAA 90 bp GCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCACACACTGCTGTGCGAGTCCTaGCGCGGGTCCACCTGCACG +
Preference number: 5 (lower is better)
Translates to: AEGLCLHTITPCSVGEHTLLCES*RGSTCT
Trigger: CGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCAG...TGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp GGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCTGGGACCAACCTGGAGGTCAGGACAGCACCAAACCATaGACACCGAAGCCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: GSRTPQAANLAWDQPGGQDSTKP*TPKPRG
Trigger: ACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGTC...CTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp TCGAAGGCGCGCTCCATGGACGAGTGCGACTGCTCTAGGAAGCGCTCGGAGCTGCCGAAATCCCCAATCTaGAGCACGAGGTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SKARSMDECDCSRKRSELPKSPI*STRSSV
Trigger: CACAGAGGACCTCGTGCTCAAGATTGGGGATTTCGG...CAGCTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CAA 90 bp CGGAGCTACCTCTGCAAGATTTCTCGGCATCCTGCCACCCAGGTGGGGCCCGCAGGTCTCCAGGATGAGTaGCATCTGCTCCAGCTCATG +
Preference number: 5 (lower is better)
Translates to: RSYLCKISRHPATQVGPAGLQDE*HLLQLM
Trigger: CATGAGCTGGAGCAGATGCAACTCATCCTGGAGACC...TGCGGGCCCCACCTGGGTGGCAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS-3UTR CAA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTCTGCTGTGCGAGTCCTaGCGCGGGTCCACCTGCACG +
Preference number: 5 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPLLCES*RGSTCT
Trigger: CGTGCAGGTGGACCCGCGCAAGGACTCGCACAGCAG...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp CTTTCTGTCCCCGACCTCTTCCCCCGAGGAGGGTGGAAACTTTCTCCGCCCTCCCTCAGGCTGCTAATCTaGCCTGGGACCAACCTGGAG +
Preference number: 5 (lower is better)
Translates to: LSVPDLFPRGGWKLSPPSLRLLI*PGTNLE
Trigger: CTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAG...GGAGGGCGGAGAAAGTTTCCACCCTCCTCGGGGGAAGAGGTCGGGGACAGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp GGAAGCCGGACCCCTCAGGCTGCTAATCTTGCCTGGGACCAACCTGGAGGTCAGAGAAGACATGAGACGTaGGTCTCTGAGCCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GSRTPQAANLAWDQPGGQRRHET*VSEPQA
Trigger: GGCCTGGGGCTCAGAGACCAACGTCTCATGTCTTCT...CTGACCTCCAGGTTGGTCCCAGGCAAGATTAGCAGCCTGAGGGGTCCGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp TTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGCGCCGAATGATCTaGATCTCTCGGAGCGCGTGC +
Preference number: 5 (lower is better)
Translates to: FLSLLGSFTCSANPKAAERRRMI*ISRSAC
Trigger: GCACGCGCTCCGAGAGATCAAGATCATTCGGCGCCT...CTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS GCA 90 bp TTGTCGTGGTCCAGGCGCCGAATGATCTTGATCTCTCGGAGCGCGTaGTTCATGCTGCGGGCATCGCTCAGGGCAATCTTCTTCACAGCG +
Preference number: 5 (lower is better)
Translates to: LSWSRRRMILISRSA*FMLRASLRAIFFTA
Trigger: CGCTGTGAAGAAGATTGCCCTGAGCGATGCCCGCAGCATGAAGCACGCGCTCCGAGAGATCAAGATCATTCGGCGCCTGGACCACGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CCA 90 bp CTGGCGATGCAGTCACCCTTCTCAGCCATTGTGGGCTCAGTGATCTaGAGCTGCCCAGGTAACACAGGGGCAGTCAGGAAAGGCCAAGTC +
Preference number: 5 (lower is better)
Translates to: LAMQSPFSAIVGSVI*SCPGNTGAVRKGQV
Trigger: GACTTGGCCTTTCCTGACTGCCCCTGTGTTACCTGGGCAGCTCCAGATCACTGAGCCCACAATGGCTGAGAAGGGTGACTGCATCGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CCA 90 bp GTGCCCTTGGGACCGAGCACCTCGTACACTTTGACGATGTTGTCGTaGTCCAGGCGCCGAATGATCTTGATCTCTCGGAGCGCGTGCTTC +
Preference number: 5 (lower is better)
Translates to: VPLGPSTSYTLTMLS*SRRRMILISRSACF
Trigger: GAAGCACGCGCTCCGAGAGATCAAGATCATTCGGCGCCTGGACCACGACAACATCGTCAAAGTGTACGAGGTGCTCGGTCCCAAGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CCA 90 bp AGGCTCACAGGGTACCTGGAACTGCACGTGTCCCAGTTGGACAGCTaGCTCTGGTTAGCGGCCATCAGCACGATGTCGTCGATCTCATCC +
Preference number: 5 (lower is better)
Translates to: RLTGYLELHVSQLDS*LWLAAISTMSSISS
Trigger: GGATGAGATCGACGACATCGTGCTGATGGCCGCTAACCAGAGCCAGCTGTCCAACTGGGACACGTGCAGTTCCAGGTACCCTGTGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CAA 90 bp GCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCACACAACCGAAGCCCAGGGGTaGGAAGTCAACAAAGCGCCC +
Preference number: 5 (lower is better)
Translates to: AEGLCLHTITPCSVGEHTTEAQG*EVNKAP
Trigger: GGGCGCTTTGTTGACTTCCAACCCCTGGGCTTCGGT...TGTGTGCTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGTACGCCACGCTGAACTaGAACAGCTCACCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FLSLLGSFTCSANPKAAEYATLN*NSSPCR
Trigger: CCTGCAGGGTGAGCTGTTCAAGTTCAGCGTGGCGTA...CTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp GGCCATGTGGTAGAAGACATGAGACGTTGGTCTCTGAGCCCCAGGCCTCCCCTTTACGCCACGCTGAACTaGAACAGCTCACCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GHVVEDMRRWSLSPRPPLYATLN*NSSPCR
Trigger: CCTGCAGGGTGAGCTGTTCAAGTTCAGCGTGGCGTA...AAGGGGAGGCCTGGGGCTCAGAGACCAACGTCTCATGTCTTCTACCACATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp CTTTCTGTCCCCGACCTCTTCCCCCGAGGAGGGTGGAAACTTTCTCCGCCCTCCGCTGATCAACGATCCTaGCCAACCCGAAATCCCCAA +
Preference number: 5 (lower is better)
Translates to: LSVPDLFPRGGWKLSPPSADQRS*PTRNPQ
Trigger: TTGGGGATTTCGGGTTGGCAAGGATCGTTGATCAGC...GGAGGGCGGAGAAAGTTTCCACCCTCCTCGGGGGAAGAGGTCGGGGACAGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp TTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGCCTCACCACCTTTCTTaGGAGAAGGCCTCGGTCTGC +
Preference number: 5 (lower is better)
Translates to: FLSLLGSFTCSANPKAAEPHHLS*EKASVC
Trigger: GCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGG...CTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CAA 90 bp TCGAAGGCGCGCTCCATGGACGAGTGCGACTGCTCTAGGAAGCGCTCGGAGCTGGAGGGATTCTTGGAATaGGTGCCTTCAACCTCACTG +
Preference number: 5 (lower is better)
Translates to: SKARSMDECDCSRKRSELEGFLE*VPSTSL
Trigger: CAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTC...CAGCTCCGAGCGCTTCCTAGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592595.5
CDS-3UTR CAA 90 bp GCCACCTGCCAGGTGCTGACCATGTGCTTGGGGTGCTCCTCACCCTCTGTTTCCGAAGGCAAGAGCCAGTaGTTTTCCCTCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: ATCQVLTMCLGCSSPSVSEGKSQ*FSLCLQ
Trigger: CTGCAGACAGAGGGAAAACAACTGGCTCTTGCCTTC...GGAAACAGAGGGTGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS TCA 90 bp GCCACCAGCTCTCTGGAGACGAGAATGGCATATGGTCATGCTCGCTaGGCTGTGCTAGTTGGGGGCGCAGGCTGTCGTCTTAACCTGCAT +
Preference number: 5 (lower is better)
Translates to: ATSSLETRMAYGHAR*AVLVGGAGCRLNLH
Trigger: ATGCAGGTTAAGACGACAGCCTGCGCCCCCAACTAGCACAGCTCAGCGAGCATGACCATATGCCATTCTCGTCTCCAGAGAGCTGGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS TCA 90 bp GGTAGGAGGAGAGGTGGCCCTTCCTGGAGCAACACACTCTCACCGTaGGTCAAGCTGTCATCGTGCTCCTCAGGACCTCCGCATACTCTT +
Preference number: 5 (lower is better)
Translates to: GRRRGGPSWSNTLSP*VKLSSCSSGPPHTL
Trigger: AAGAGTATGCGGAGGTCCTGAGGAGCACGATGACAGCTTGACTCACGGTGAGAGTGTGTTGCTCCAGGAAGGGCCACCTCTCCTCCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587823.1
CDS GCA 90 bp TACTCCTGGACGATGTACGCCACGCTGAACTTGAACAGCTCACCCTaGAGGTCAGTGCCCTTGGGACCGAGCACCTCGTACACTTTGACG +
Preference number: 5 (lower is better)
Translates to: YSWTMYATLNLNSSP*RSVPLGPSTSYTLT
Trigger: CGTCAAAGTGTACGAGGTGCTCGGTCCCAAGGGCACTGACCTGCAGGGTGAGCTGTTCAAGTTCAGCGTGGCGTACATCGTCCAGGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CCA 90 bp CGATGTCGTCGATCTCATCCTCAATGCGGAAGGGGTGTTGTGAGGTaGGCTCGTCCTCAGGGCACGAGTATGGGCTCATGTAGGGGTGTT +
Preference number: 5 (lower is better)
Translates to: RCRRSHPQCGRGVVR*ARPQGTSMGSCRGV
Trigger: AACACCCCTACATGAGCCCATACTCGTGCCCTGAGGACGAGCCCACCTCACAACACCCCTTCCGCATTGAGGATGAGATCGACGACATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CAA 90 bp AGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGGGGGCCAGGAGACTGATCCTCTGGAGCCTTaGGATGTGGGCAGCATCCTC +
Preference number: 5 (lower is better)
Translates to: SRGRHSMVDRPWPGGQETDPLEP*DVGSIL
Trigger: GAGGATGCTGCCCACATCCAAAGGCTCCAGAGGATC...AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TCCTTGCCCCCAAGGTCACGACGTGCTCTCCAACACATCTCTGTAGGGTCTGCTTACGCCACGCTGAACTaGAACAGCTCACCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SLPPRSRRALQHISVGSAYATLN*NSSPCR
Trigger: CCTGCAGGGTGAGCTGTTCAAGTTCAGCGTGGCGTA...AGCAGACCCTACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGGGGCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp GGTTGGAGGGATTCTTGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCGCTCATGTAGGGGTGTaGCAGCCCCATCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GWRDSWNWCLQPHWGRTPAHVGV*QPHLSC
Trigger: ACAGCTGAGATGGGGCTGCAACACCCCTACATGAGC...GGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS-3UTR CAA 90 bp AGTGATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGAGGTCGCCCAGTTTATaGTCCGGCAGGTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: SDQPLSQGPVQTRSHRLKRSPSL*SGRSSG
Trigger: GCCCGAGGACCTGCCGGACAATAAACTGGGCGACCT...CTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CAA 90 bp AAAGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCAGGTCGCCCAGTTTATaGTCCGGCAGGTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: KARTTPVEEDILWWTDPGRSPSL*SGRSSG
Trigger: GCCCGAGGACCTGCCGGACAATAAACTGGGCGACCT...GCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGATGCACGCACCATaGAGGTCGCCCAGTTTATTG +
Preference number: 5 (lower is better)
Translates to: SSRSSDPSRVLPTPRQQRGMHAP*RSPSLL
Trigger: CAATAAACTGGGCGACCTCAATGGTGCGTGCATCCC...TCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CAA 90 bp GCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGGGTGAGCCTCACCACCTTTCTTaGGAGAAGGCCTCGGTCTGC +
Preference number: 5 (lower is better)
Translates to: ASAEGLCLHTITPCSVGEPHHLS*EKASVC
Trigger: GCAGACCGAGGCCTTCTCCAAAGAAAGGTGGTGAGG...CTCACCCACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS TCA 90 bp GCTCGTCCTTGTCTTCCTCCCGGATTACAGGGATGGTCTCCAGGATaGGTTGCATCTGCTCCAGCTCATGGGCCCCAGCAAAGAGCATTC +
Preference number: 5 (lower is better)
Translates to: ARPCLPPGLQGWSPG*VASAPAHGPQQRAF
Trigger: GAATGCTCTTTGCTGGGGCCCATGAGCTGGAGCAGATGCAACTCATCCTGGAGACCATCCCTGTAATCCGGGAGGAAGACAAGGACGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS GCA 90 bp CACGCCACCTCGCCCAAGACTGTATTCCACTGCACCAAGAGAGGCTaGAGGAATGTGGCATCTTTCAGACCAAGTCTCCTTCCCGAGGCA +
Preference number: 5 (lower is better)
Translates to: HATSPKTVFHCTKRG*RNVASFRPSLLPEA
Trigger: TGCCTCGGGAAGGAGACTTGGTCTGAAAGATGCCACATTCCTGCAGCCTCTCTTGGTGCAGTGGAATACAGTCTTGGGCGAGGTGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS GCA 90 bp TCCTTGTCTTCCTCCCGGATTACAGGGATGGTCTCCAGGATGAGTTaGATCTGCTCCAGCTCATGGGCCCCAGCAAAGAGCATTCTCCCC +
Preference number: 5 (lower is better)
Translates to: SLSSSRITGMVSRMS*ICSSSWAPAKSILP
Trigger: GGGGAGAATGCTCTTTGCTGGGGCCCATGAGCTGGAGCAGATGCAACTCATCCTGGAGACCATCCCTGTAATCCGGGAGGAAGACAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS GCA 90 bp CACGCCACCTCGCCCAAGACTGTATTCCACTGCACCAAGAGAGGCTaGAGGAATGTGGCATCTTTCAGACCAAGTCTCCTTCCCGCCAGT +
Preference number: 5 (lower is better)
Translates to: HATSPKTVFHCTKRG*RNVASFRPSLLPAS
Trigger: ACTGGCGGGAAGGAGACTTGGTCTGAAAGATGCCACATTCCTGCAGCCTCTCTTGGTGCAGTGGAATACAGTCTTGGGCGAGGTGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS CCA 90 bp CGCCCAAGACTGTATTCCACTGCACCAAGAGAGGCTGCAGGAATGTaGCATCTTTCAGACCAAGTCTCCTTCCCGAGGCAGAGCCCGAGA +
Preference number: 5 (lower is better)
Translates to: RPRLYSTAPREAAGM*HLSDQVSFPRQSPR
Trigger: TCTCGGGCTCTGCCTCGGGAAGGAGACTTGGTCTGAAAGATGCCACATTCCTGCAGCCTCTCTTGGTGCAGTGGAATACAGTCTTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS CCA 90 bp ACAGGGTACCTGGAACTGCACGTGTCCCAGTTGGACAGCTGGCTCTaGTTAGCGGCCATCAGCACGATGTCGTCGATCTCATCCTCAATG +
Preference number: 5 (lower is better)
Translates to: TGYLELHVSQLDSWL*LAAISTMSSISSSM
Trigger: CATTGAGGATGAGATCGACGACATCGTGCTGATGGCCGCTAACCAGAGCCAGCTGTCCAACTGGGACACGTGCAGTTCCAGGTACCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CAA 90 bp GAGGAGTGGGTAATAATAACAGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGGATCCTCTGGAGCCTTaGGATGTGGGCAGCATCCTC +
Preference number: 5 (lower is better)
Translates to: EEWVIITATCQVLTMCLGDPLEP*DVGSIL
Trigger: GAGGATGCTGCCCACATCCAAAGGCTCCAGAGGATC...CCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGTTATTATTACCCACTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp CTCCTGAAGGCAAGAGCCAGTTGTTTTCCCTCTGTCTGCAGTGCACCTCTGTACAGGCGCCGAATGATCTaGATCTCTCGGAGCGCGTGC +
Preference number: 5 (lower is better)
Translates to: LLKARASCFPSVCSAPLYRRRMI*ISRSAC
Trigger: GCACGCGCTCCGAGAGATCAAGATCATTCGGCGCCT...GTACAGAGGTGCACTGCAGACAGAGGGAAAACAACTGGCTCTTGCCTTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp GGTTGGAGGGATTCTTGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCTACACTTTGACGATGTaGTCGTGGTCCAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: GWRDSWNWCLQPHWGRTPYTLTM*SWSRRR
Trigger: TCGGCGCCTGGACCACGACAACATCGTCAAAGTGTA...GGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCAGTGGGGAAAGAGGGAGCACCTCGTACACTTaGACGATGTTGTCGTGGTCC +
Preference number: 5 (lower is better)
Translates to: WNWCLQPHWGRTPSGERGSTSYT*TMLSWS
Trigger: GGACCACGACAACATCGTCAAAGTGTACGAGGTGCT...CCCTCTTTCCCCACTGGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCACTGAGCAGCTCGTCCTaGTCTTCCTCCCGGATTACA +
Preference number: 5 (lower is better)
Translates to: TFLSLLGSFTCSANPKAALSSSS*SSSRIT
Trigger: TGTAATCCGGGAGGAAGACAAGGACGAGCTGCTCAG...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CAA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAGGCAGGTCCTCGGGCTaGGTGCAGAGCTTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPGRSSG*VQSFRA
Trigger: CGCCCTGAAGCTCTGCACCAAGCCCGAGGACCTGCC...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CAA 90 bp CATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACCTTAGCCTAAGGTCGCCCAGTTTATaGTCCGGCAGGTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: HALWVSTQVCMHQTHLSLRSPSL*SGRSSG
Trigger: GCCCGAGGACCTGCCGGACAATAAACTGGGCGACCT...TAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp AGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGGGGGCCAGGAGACTGGGATGCACGCACCATaGAGGTCGCCCAGTTTATTG +
Preference number: 5 (lower is better)
Translates to: SRGRHSMVDRPWPGGQETGMHAP*RSPSLL
Trigger: CAATAAACTGGGCGACCTCAATGGTGCGTGCATCCC...AGTCTCCTGGCCCCCAGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGGGATGCACGCACCATaGAGGTCGCCCAGTTTATTG +
Preference number: 5 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRGMHAP*RSPSLL
Trigger: CAATAAACTGGGCGACCTCAATGGTGCGTGCATCCC...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CAA 90 bp CTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGAGGGGTCTCTCCTAACACATTaGCTCTATGGCAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: LAPRILHVFCQPQGSREGSLLTH*LYGRTS
Trigger: TGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGAGA...CCCCTCTCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS TCA 90 bp GCTTGGGGTGCTCCTCACCCTCTGTTTCCTTCCATTTGGTCATCATaGTGCTCTCCCAGGATGGCTGCTGTCATTGTCCCTGCTCCACAG +
Preference number: 5 (lower is better)
Translates to: AWGAPHPLFPSIWSS*CSPRMAAVIVPAPQ
Trigger: CTGTGGAGCAGGGACAATGACAGCAGCCATCCTGGGAGAGCATCATGATGACCAAATGGAAGGAAACAGAGGGTGAGGAGCACCCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAGATCCTCTGGAGCCTTaGGATGTGGGCAGCATCCTC +
Preference number: 5 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPDPLEP*DVGSIL
Trigger: GAGGATGCTGCCCACATCCAAAGGCTCCAGAGGATC...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp AGAAATCTCAGGACAAAGGTAGTGTCTGTGCTCAAGCCTAGCCCTCTGCCGTGTACCGAAGCCCAGGGGTaGGAAGTCAACAAAGCGCCC +
Preference number: 5 (lower is better)
Translates to: RNLRTKVVSVLKPSPLPCTEAQG*EVNKAP
Trigger: GGGCGCTTTGTTGACTTCCAACCCCTGGGCTTCGGT...ACACGGCAGAGGGCTAGGCTTGAGCACAGACACTACCTTTGTCCTGAGATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp CATGCTCTGTGGGTGAGCACACAGGTTTGCATGCACCAAACTCACCTTAGCCTAAGGCGCCGAATGATCTaGATCTCTCGGAGCGCGTGC +
Preference number: 5 (lower is better)
Translates to: HALWVSTQVCMHQTHLSLRRRMI*ISRSAC
Trigger: GCACGCGCTCCGAGAGATCAAGATCATTCGGCGCCT...TAGGCTAAGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACCCACAGAGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TGCTCAAGCCTAGCCCTCTGCCGTGTGGGGTATGGGTCCGGTTTTCTATTGAACTACACTTTGACGATGTaGTCGTGGTCCAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: CSSLALCRVGYGSGFLLNYTLTM*SWSRRR
Trigger: TCGGCGCCTGGACCACGACAACATCGTCAAAGTGTA...GTTCAATAGAAAACCGGACCCATACCCCACACGGCAGAGGGCTAGGCTTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCTGCAGGTCAGTGCCCTaGGGACCGAGCACCTCGTAC +
Preference number: 5 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSACRSVP*GPSTSY
Trigger: GTACGAGGTGCTCGGTCCCAAGGGCACTGACCTGCA...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp GACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCGGGAACGGTACCACTTaGTTACCAACCCTTCTGACA +
Preference number: 5 (lower is better)
Translates to: DIPLAPRILHVFCQPQGSGNGTT*LPTLLT
Trigger: TGTCAGAAGGGTTGGTAACAAAGTGGTACCGTTCCC...GCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CAA 90 bp GATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGCTCTGAGCAGCTCGTCCTaGTCTTCCTCCCGGATTACA +
Preference number: 5 (lower is better)
Translates to: DQPLSQGPVQTRSHRLKALSSSS*SSSRIT
Trigger: TGTAATCCGGGAGGAAGACAAGGACGAGCTGCTCAG...AGCCTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CAA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGAGGTGAGCACACAGGTTaGCATGCACCAAACTCACCT +
Preference number: 5 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRGEHTG*HAPNSP
Trigger: AGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACC...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TGCTCAAGCCTAGCCCTCTGCCGTGTGGGGTATGGGTCCGGTTTTCTATTGAACGGATGGCTGCTGTCATaGTCCCTGCTCCACAGAAGA +
Preference number: 5 (lower is better)
Translates to: CSSLALCRVGYGSGFLLNGWLLS*SLLHRR
Trigger: TCTTCTGTGGAGCAGGGACAATGACAGCAGCCATCC...GTTCAATAGAAAACCGGACCCATACCCCACACGGCAGAGGGCTAGGCTTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp AGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGTGCTCCTCACCCTCTGTTTCCATGAGGTGCACACTTaGGATGGAAAGACAGCTGAA +
Preference number: 5 (lower is better)
Translates to: SHLPGADHVLGVLLTLCFHEVHT*DGKTAE
Trigger: TTCAGCTGTCTTTCCATCCAAAGTGTGCACCTCATG...GAAACAGAGGGTGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS GCA 90 bp TTGGTCATCATGATGCTCTCCCAGGATGGCTGCTGTCATTGTCCCTaGTCCACAGAAGAGGATGCAGAGGCAGGGAGGGTAACGACACAA +
Preference number: 5 (lower is better)
Translates to: LVIMMLSQDGCCHCP*STEEDAEAGRVTTQ
Trigger: TTGTGTCGTTACCCTCCCTGCCTCTGCATCCTCTTCTGTGGAGCAGGGACAATGACAGCAGCCATCCTGGGAGAGCATCATGATGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS GCA 90 bp CACGCCACCTCGCCCAAGACTGTATTCCACTGCACCAAGAGAGGCTaGAGGAATGTGGCATCTTTCAGACCAAGTCTCCTTCCCTACTCA +
Preference number: 5 (lower is better)
Translates to: HATSPKTVFHCTKRG*RNVASFRPSLLPYS
Trigger: TGAGTAGGGAAGGAGACTTGGTCTGAAAGATGCCACATTCCTGCAGCCTCTCTTGGTGCAGTGGAATACAGTCTTGGGCGAGGTGGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586735.1
CDS CCA 90 bp CGCCCAAGACTGTATTCCACTGCACCAAGAGAGGCTGCAGGAATGTaGCATCTTTCAGACCAAGTCTCCTTCCCTACTCACAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: RPRLYSTAPREAAGM*HLSDQVSFPTHSSP
Trigger: AGGGCTGCTGTGAGTAGGGAAGGAGACTTGGTCTGAAAGATGCCACATTCCTGCAGCCTCTCTTGGTGCAGTGGAATACAGTCTTGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586735.1
CDS-3UTR CAA 90 bp AAAGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCCGAAATCCCCAATCTaGAGCACGAGGTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: KARTTPVEEDILWWTDPGPKSPI*STRSSV
Trigger: CACAGAGGACCTCGTGCTCAAGATTGGGGATTTCGG...GCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp CTCCTGAAGGCAAGAGCCAGTTGTTTTCCCTCTGTCTGCAGTGCACCTCTGTACCCGAAATCCCCAATCTaGAGCACGAGGTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LLKARASCFPSVCSAPLYPKSPI*STRSSV
Trigger: CACAGAGGACCTCGTGCTCAAGATTGGGGATTTCGG...GTACAGAGGTGCACTGCAGACAGAGGGAAAACAACTGGCTCTTGCCTTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp AGTGATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGGGTCTCCAGGATGAGTaGCATCTGCTCCAGCTCATG +
Preference number: 5 (lower is better)
Translates to: SDQPLSQGPVQTRSHRLKGLQDE*HLLQLM
Trigger: CATGAGCTGGAGCAGATGCAACTCATCCTGGAGACC...CTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CAA 90 bp GGTTGGAGGGATTCTTGGAATTGGTGCCTTCAACCTCACTGGGGTAGGACGCCCAAGAGGGCTGTGTCTTaGCGTGTCAGGAAAGTGCAT +
Preference number: 5 (lower is better)
Translates to: GWRDSWNWCLQPHWGRTPKRAVS*RVRKVH
Trigger: ATGCACTTTCCTGACACGCAAAGACACAGCCCTCTT...GGGCGTCCTACCCCAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS GCA 90 bp TTTCACCAGCTCATCCACGCCACCTCGCCCAAGACTGTATTCCACTaGACCAAGAGAGGCTGCAGGAATGTGGCATCTTTCAGACCAAGT +
Preference number: 5 (lower is better)
Translates to: FHQLIHATSPKTVFH*TKRGCRNVASFRPS
Trigger: ACTTGGTCTGAAAGATGCCACATTCCTGCAGCCTCTCTTGGTGCAGTGGAATACAGTCTTGGGCGAGGTGGCGTGGATGAGCTGGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400384.7
ENST00000586735.1
ENST00000588540.1
ENST00000592595.5
CDS-3UTR CAA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCGACAGCACCAAACCATaGACACCGAAGCCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: FQARPHTKPVILSECLCLDSTKP*TPKPRG
Trigger: ACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGTC...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCGACAGCACCAAACCATaGACACCGAAGCCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTDSTKP*TPKPRG
Trigger: ACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGTC...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp AGCCAGAACGACCCCAGTAGAGGAAGACATTCTATGGTGGACAGACCCTGGCCTGGGAACGGTACCACTTaGTTACCAACCCTTCTGACA +
Preference number: 5 (lower is better)
Translates to: SQNDPSRGRHSMVDRPWPGNGTT*LPTLLT
Trigger: TGTCAGAAGGGTTGGTAACAAAGTGGTACCGTTCCC...AGGCCAGGGTCTGTCCACCATAGAATGTCTTCCTCTACTGGGGTCGTTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACTTCAGGGAGCAGCTaGCGCAGAGGCCTCTTCACC +
Preference number: 5 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPTSGSS*RRGLFT
Trigger: GGTGAAGAGGCCTCTGCGCAAGCTGCTCCCTGAAGT...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CAA 90 bp TCCTTGCCCCCAAGGTCACGACGTGCTCTCCAACACATCTCTGTAGGGTCTGCTTCTCTCCTAACACATTaGCTCTATGGCAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: SLPPRSRRALQHISVGSASLLTH*LYGRTS
Trigger: TGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGAGA...AGCAGACCCTACAGAGATGTGTTGGAGAGCACGTCGTGACCTTGGGGGCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TGCTCAAGCCTAGCCCTCTGCCGTGTGGGGTATGGGTCCGGTTTTCTATTGAACTCTCCCCAGTTTGACTaGCAGAGAACGCTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: CSSLALCRVGYGSGFLLNSPQFD*QRTLRR
Trigger: TCTTCTGAGCGTTCTCTGCAAGTCAAACTGGGGAGA...GTTCAATAGAAAACCGGACCCATACCCCACACGGCAGAGGGCTAGGCTTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp CTCCTGAAGGCAAGAGCCAGTTGTTTTCCCTCTGTCTGCAGTGCACCTCTGTACGGAACTCTCCCCAGTTaGACTTGCAGAGAACGCTCA +
Preference number: 5 (lower is better)
Translates to: LLKARASCFPSVCSAPLYGTLPS*TCRERS
Trigger: TGAGCGTTCTCTGCAAGTCAAACTGGGGAGAGTTCC...GTACAGAGGTGCACTGCAGACAGAGGGAAAACAACTGGCTCTTGCCTTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp GGGAGGCAGCGAGGGCTCCTGAAGGCAAGAGCCAGTTGTTTTCCCTCTGTCTGCGGGTCCGGTTTTCTATaGAACATGCTATTCATGCTA +
Preference number: 5 (lower is better)
Translates to: GRQRGLLKARASCFPSVCGSGFL*NMLFML
Trigger: TAGCATGAATAGCATGTTCAATAGAAAACCGGACCC...GCAGACAGAGGGAAAACAACTGGCTCTTGCCTTCAGGAGCCCTCGCTGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS GCA 90 bp AACTCATTAGCGGGCCTTGTGGGAGTAATGCTGATCAACGATCCTTaGCAACCCGAAATCCCCAATCTTGAGCACGAGGTCCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: NSLAGLVGVMLINDP*QPEIPNLEHEVLCA
Trigger: AGCACAGAGGACCTCGTGCTCAAGATTGGGGATTTCGGGTTGGCAAGGATCGTTGATCAGCATTACTCCCACAAGGCCCGCTAATGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587823.1
CDS-3UTR CAA 90 bp CGACCATGCAGGGGTGAGGCAAATACAGGGGTGCGACAGATGAGAACATTTAAGGCTGATCAACGATCCTaGCCAACCCGAAATCCCCAA +
Preference number: 5 (lower is better)
Translates to: RPCRGEANTGVRQMRTFKADQRS*PTRNPQ
Trigger: TTGGGGATTTCGGGTTGGCAAGGATCGTTGATCAGC...CTTAAATGTTCTCATCTGTCGCACCCCTGTATTTGCCTCACCCCTGCATGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACGCTCATGTAGGGGTGTaGCAGCCCCATCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANAHVGV*QPHLSC
Trigger: ACAGCTGAGATGGGGCTGCAACACCCCTACATGAGC...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CAA 90 bp TTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCTGCACGTGTCCCAGTaGGACAGCTGGCTCTGGTTA +
Preference number: 5 (lower is better)
Translates to: FKKWTFLSLLGSFTCSANLHVSQ*DSWLWL
Trigger: TAACCAGAGCCAGCTGTCCAACTGGGACACGTGCAG...GTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS-3UTR CAA 90 bp ACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGCCAGGAAAGTATGCTaGGTGACTAGGAGAAACAAA +
Preference number: 5 (lower is better)
Translates to: TFLSLLGSFTCSANPKAAARKVC*VTRRNK
Trigger: TTTGTTTCTCCTAGTCACCAAGCATACTTTCCTGGC...TGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp AGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGTTGGAGGGATTCTaGGAATTGGTGCCTTCAACC +
Preference number: 5 (lower is better)
Translates to: RNGHSSRSSDPSRVLPTPRLEGF*ELVPST
Trigger: GGTTGAAGGCACCAATTCCAAGAATCCCTCCAACCT...TGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp CCCCACGCTTCTGCAGAGGGCCTGTGTCTACACACCATTACCCCATGCTCTGTGAAACTCAGGAAAGTATaGATGAAGGATGTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: PHASAEGLCLHTITPCSVKLRKV*MKDVGS
Trigger: GGACCCAACATCCTTCATCAATACTTTCCTGAGTTT...CACAGAGCATGGGGTAATGGTGTGTAGACACAGGCCCTCTGCAGAAGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp AGTGATCAACCCCTAAGCCAGGGTCCTGTTCAAACCCGCTCCCACAGGTTAAAGAGGGGCATTGCTGCTTaGAGTCCCTTCCTTTGTCAT +
Preference number: 5 (lower is better)
Translates to: SDQPLSQGPVQTRSHRLKRGIAA*SPFLCH
Trigger: ATGACAAAGGAAGGGACTCAAAGCAGCAATGCCCCT...CTTTAACCTGTGGGAGCGGGTTTGAACAGGACCCTGGCTTAGGGGTTGATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TTTGCCAGCAGTAGCTCAGCTCACCTCCTGAGAACCCTGTTGAAGGTATTTATTGTGCTGACCATGTGCTaGGGGTGCTCCTCACCCTCT +
Preference number: 5 (lower is better)
Translates to: FASSSSAHLLRTLLKVFIVLTMC*GCSSPS
Trigger: AGAGGGTGAGGAGCACCCCAAGCACATGGTCAGCAC...AATAAATACCTTCAACAGGGTTCTCAGGAGGTGAGCTGAGCTACTGCTGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS GCA 90 bp CAAAGCTCAGCTGTGTCACAGCCTCTTTCTGTGTTCCAAGCAGTATaGAGGGATCCCATCAATGAATTCTGGAGGCATCCAGGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: QSSAVSQPLSVFQAV*RDPINEFWRHPGAS
Trigger: AGAAGCCCCTGGATGCCTCCAGAATTCATTGATGGGATCCCTGCATACTGCTTGGAACACAGAAAGAGGCTGTGACACAGCTGAGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS GCA 90 bp GTAATAATAACAGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGTaGTCCTCACCCTCTGTTTCCTTCCATTTGGTCATCATGATGCTC +
Preference number: 5 (lower is better)
Translates to: VIITATCQVLTMCLG*SSPSVSFHLVIMML
Trigger: GAGCATCATGATGACCAAATGGAAGGAAACAGAGGGTGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGTTATTATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp GACCAACCTGGAGGTCAGACTCAGAGCTTTATTTCACCTCTCTACACCTCCACCGCTGAAATGCAAGAGTaGTTTGCTGAGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: DQPGGQTQSFISPLYTSTAEMQE*FAELSS
Trigger: GGAGCTCAGCTCAGCAAACAACTCTTGCATTTCAGC...GGTGGAGGTGTAGAGAGGTGAAATAAAGCTCTGAGTCTGACCTCCAGGTTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCGCTGATCAACGATCCTaGCCAACCCGAAATCCCCAA +
Preference number: 5 (lower is better)
Translates to: FQARPHTKPVILSECLCLADQRS*PTRNPQ
Trigger: TTGGGGATTTCGGGTTGGCAAGGATCGTTGATCAGC...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp CCCGCAGACTGCTGTCTAAAGCCGTTTCTTCCCTGTGCACCACATGTGGTCTCCAGAACATTTAAGTACTaGGGGAGCCAGGAAAGTATG +
Preference number: 5 (lower is better)
Translates to: PADCCLKPFLPCAPHVVSRTFKY*GSQESM
Trigger: CATACTTTCCTGGCTCCCCAAGTACTTAAATGTTCT...GGAGACCACATGTGGTGCACAGGGAAGAAACGGCTTTAGACAGCAGTCTGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp CGACCATGCAGGGGTGAGGCAAATACAGGGGTGCGACAGATGAGAACATTTAAGGAGGGATTCTTGGAATaGGTGCCTTCAACCTCACTG +
Preference number: 5 (lower is better)
Translates to: RPCRGEANTGVRQMRTFKEGFLE*VPSTSL
Trigger: CAGTGAGGTTGAAGGCACCAATTCCAAGAATCCCTC...CTTAAATGTTCTCATCTGTCGCACCCCTGTATTTGCCTCACCCCTGCATGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp AGAAATCTCAGGACAAAGGTAGTGTCTGTGCTCAAGCCTAGCCCTCTGCCGTGTTCTGTACAAGGGATTTaGCCAGCAGTAGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: RNLRTKVVSVLKPSPLPCSVQGI*PAVAQL
Trigger: GAGCTGAGCTACTGCTGGCAAAATCCCTTGTACAGA...ACACGGCAGAGGGCTAGGCTTGAGCACAGACACTACCTTTGTCCTGAGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp CTCCTGAAGGCAAGAGCCAGTTGTTTTCCCTCTGTCTGCAGTGCACCTCTGTACGAGGGGAGGGAATATTaGTTGACATCCACTCTGTAC +
Preference number: 5 (lower is better)
Translates to: LLKARASCFPSVCSAPLYEGREY*LTSTLY
Trigger: GTACAGAGTGGATGTCAACAAATATTCCCTCCCCTC...GTACAGAGGTGCACTGCAGACAGAGGGAAAACAACTGGCTCTTGCCTTCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS GCA 90 bp GATGCAATCAGTAGACTTGTGGGAGTAATGCTGATCAACGATCCTTaGCAACCCGAAATCCCCAATCTTGAGCACGAGGTCCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: DAISRLVGVMLINDP*QPEIPNLEHEVLCA
Trigger: AGCACAGAGGACCTCGTGCTCAAGATTGGGGATTTCGGGTTGGCAAGGATCGTTGATCAGCATTACTCCCACAAGTCTACTGATTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp CAGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCGCTGAAATGCAAGAGTaGTTTGCTGAGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: QFKKWTFLSLLGSFTCSAAEMQE*FAELSS
Trigger: GGAGCTCAGCTCAGCAAACAACTCTTGCATTTCAGC...GGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp ATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCCCAAGGCAGCAGATCCCCTTTGAATACTTaGTTACAAGAGGCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: IPLAPRILHVFCQPQGSRSPLNT*LQEALS
Trigger: AGAAAGAGCCTCTTGTAACAAAGTATTCAAAGGGGA...TCTGCTGCCTTGGGGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAACCGGGAACGGTACCACTTaGTTACCAACCCTTCTGACA +
Preference number: 5 (lower is better)
Translates to: LRNGHSSRSSDPSRVLPTGNGTT*LPTLLT
Trigger: TGTCAGAAGGGTTGGTAACAAAGTGGTACCGTTCCC...GGTTGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000540640.3
ENST00000592595.5
CDS-3UTR CAA 90 bp GATGATCAAACTCAGGAAAGTATTGATGAAGGATGTTGGGTCCCATGTGAAACCACTTCAGGGAGCAGCTaGCGCAGAGGCCTCTTCACC +
Preference number: 5 (lower is better)
Translates to: DDQTQESIDEGCWVPCETTSGSS*RRGLFT
Trigger: GGTGAAGAGGCCTCTGCGCAAGCTGCTCCCTGAAGT...GGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS-3UTR CAA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCATTCCTCAGCTGTCAGTaGAGGCTAGTTGGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPFLSCQ*RLVGPD
Trigger: ATCTGGCCCAACTAGCCTCAACTGACAGCTGAGGAA...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp AAACTCACCTTAGCCTACACTATGAGGGGCATTGCTGCTTTGAGTCCCTTCCTTTTCCTCAGCTGTCAGTaGAGGCTAGTTGGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: KLTLAYTMRGIAALSPFLFLSCQ*RLVGPD
Trigger: ATCTGGCCCAACTAGCCTCAACTGACAGCTGAGGAA...AAGGAAGGGACTCAAAGCAGCAATGCCCCTCATAGTGTAGGCTAAGGTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TCTCCTAACACATTTGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAATGAGCAGGGGCATTGCTGCTTaGAGTCCCTTCCTTTGTCAT +
Preference number: 5 (lower is better)
Translates to: SPNTFALWQDLTAVLQMSRGIAA*SPFLCH
Trigger: ATGACAAAGGAAGGGACTCAAAGCAGCAATGCCCCT...GCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp AGTTTAAGAAATGGACATTCCTCTCGCTCCTCGGATCCTTCACGTGTTCTGCCAGGTGAGCACACAGGTTaGCATGCACCAAACTCACCT +
Preference number: 5 (lower is better)
Translates to: SLRNGHSSRSSDPSRVLPGEHTG*HAPNSP
Trigger: AGGTGAGTTTGGTGCATGCAAACCTGTGTGCTCACC...TGGCAGAACACGTGAAGGATCCGAGGAGCGAGAGGAATGTCCATTTCTTAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS TCA 90 bp ACAGCCTCTTTCTGTGTTCCAAGCAGTATGCAGGGATCCCATCAATaGATTCTGGAGGCATCCAGGGGCTTCTTTCTACCTCTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: TASFCVPSSMQGSHQ*ILEASRGFFLPLLF
Trigger: AAACAGGAGAGGTAGAAAGAAGCCCCTGGATGCCTCCAGAATTCATTGATGGGATCCCTGCATACTGCTTGGAACACAGAAAGAGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CCA 90 bp CTTTCTGTGTTCCAAGCAGTATGCAGGGATCCCATCAATGAATTCTaGAGGCATCCAGGGGCTTCTTTCTACCTCTCCTGTTTCTACCAG +
Preference number: 5 (lower is better)
Translates to: LSVFQAVCRDPINEF*RHPGASFYLSCFYQ
Trigger: CTGGTAGAAACAGGAGAGGTAGAAAGAAGCCCCTGGATGCCTCCAGAATTCATTGATGGGATCCCTGCATACTGCTTGGAACACAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS-3UTR CAA 90 bp CCTCTTCCCCCGAGGAGGGTGGAAACTTTCTCCGCCCTCCTAGCAAACTTTTCTTCCCCTTTGAATACTTaGTTACAAGAGGCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: PLPPRRVETFSALLANFSSPLNT*LQEALS
Trigger: AGAAAGAGCCTCTTGTAACAAAGTATTCAAAGGGGA...AGAAAAGTTTGCTAGGAGGGCGGAGAAAGTTTCCACCCTCCTCGGGGGAAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp TTTGCCAGCAGTAGCTCAGCTCACCTCCTGAGAACCCTGTTGAAGGTATTTATTAGCACCTCGTACACTTaGACGATGTTGTCGTGGTCC +
Preference number: 5 (lower is better)
Translates to: FASSSSAHLLRTLLKVFISTSYT*TMLSWS
Trigger: GGACCACGACAACATCGTCAAAGTGTACGAGGTGCT...AATAAATACCTTCAACAGGGTTCTCAGGAGGTGAGCTGAGCTACTGCTGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS-3UTR CAA 90 bp AAAGTATGCTTGGTGACTAGGAGAAACAAACTGGTTCAGTTTCCAGTTTCAGAATGCAGGTCAGTGCCCTaGGGACCGAGCACCTCGTAC +
Preference number: 5 (lower is better)
Translates to: KVCLVTRRNKLVQFPVSECRSVP*GPSTSY
Trigger: GTACGAGGTGCTCGGTCCCAAGGGCACTGACCTGCA...TTCTGAAACTGGAAACTGAACCAGTTTGTTTCTCCTAGTCACCAAGCATACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp CTAGTTGGGCCAGATGGTTTCGGAGCTACCTCTGCAAGATTTCTCGGCATCCTGTCCCCTTTGAATACTTaGTTACAAGAGGCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: LVGPDGFGATSARFLGILSPLNT*LQEALS
Trigger: AGAAAGAGCCTCTTGTAACAAAGTATTCAAAGGGGA...CAGGATGCCGAGAAATCTTGCAGAGGTAGCTCCGAAACCATCTGGCCCAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp AAAGTATGCTTGGTGACTAGGAGAAACAAACTGGTTCAGTTTCCAGTTTCAGAAACCGAAGCCCAGGGGTaGGAAGTCAACAAAGCGCCC +
Preference number: 5 (lower is better)
Translates to: KVCLVTRRNKLVQFPVSETEAQG*EVNKAP
Trigger: GGGCGCTTTGTTGACTTCCAACCCCTGGGCTTCGGT...TTCTGAAACTGGAAACTGAACCAGTTTGTTTCTCCTAGTCACCAAGCATACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp GATGATCAAACTCAGGAAAGTATTGATGAAGGATGTTGGGTCCCATGTGAAACCTACACTTTGACGATGTaGTCGTGGTCCAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: DDQTQESIDEGCWVPCETYTLTM*SWSRRR
Trigger: TCGGCGCCTGGACCACGACAACATCGTCAAAGTGTA...GGTTTCACATGGGACCCAACATCCTTCATCAATACTTTCCTGAGTTTGATCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCGCCAGGAAAGTATGCTaGGTGACTAGGAGAAACAAA +
Preference number: 5 (lower is better)
Translates to: FQARPHTKPVILSECLCLARKVC*VTRRNK
Trigger: TTTGTTTCTCCTAGTCACCAAGCATACTTTCCTGGC...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TCTCCTAACACATTTGCTCTATGGCAGGACCTCACTGCTGTCCTCCAAATGAGCAGAACATTTAAGTACTaGGGGAGCCAGGAAAGTATG +
Preference number: 5 (lower is better)
Translates to: SPNTFALWQDLTAVLQMSRTFKY*GSQESM
Trigger: CATACTTTCCTGGCTCCCCAAGTACTTAAATGTTCT...GCTCATTTGGAGGACAGCAGTGAGGTCCTGCCATAGAGCAAATGTGTTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp TTTCAAGCTCGTCCTCACACTAAGCCTGTGATCTTAAGCGAGTGTCTCTGCCTCAAACTCAGGAAAGTATaGATGAAGGATGTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: FQARPHTKPVILSECLCLKLRKV*MKDVGS
Trigger: GGACCCAACATCCTTCATCAATACTTTCCTGAGTTT...GAGGCAGAGACACTCGCTTAAGATCACAGGCTTAGTGTGAGGACGAGCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS-3UTR CAA 90 bp AGGGTGGAAACTTTCTCCGCCCTCCTAGCAAACTTTTCTCTCAGCTCCCTTATTGGGAGGGAATATTTGTaGACATCCACTCTGTACAAG +
Preference number: 5 (lower is better)
Translates to: RVETFSALLANFSLSSLIGREYL*TSTLYK
Trigger: CTTGTACAGAGTGGATGTCAACAAATATTCCCTCCC...AATAAGGGAGCTGAGAGAAAAGTTTGCTAGGAGGGCGGAGAAAGTTTCCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS CCA 90 bp AAGAACAAAAGGAACTTCCCTGACTTCTCCCTTCTCAGAAGGCTCTaGAATGTGACCCACAATGCTTGTGATGCAATCAGTAGACTTGTG +
Preference number: 5 (lower is better)
Translates to: KNKRNFPDFSLLRRL*NVTHNACDAISRLV
Trigger: CACAAGTCTACTGATTGCATCACAAGCATTGTGGGTCACATTCCAGAGCCTTCTGAGAAGGGAGAAGTCAGGGAAGTTCCTTTTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS GCA 90 bp CCTAATGGGATAAATTCAGAAGAAAGCACACTCCAATCCTTCAGCTaGCTCTTCTCAACACAAACAACGAAGAACTCATTAGCGGGCCTT +
Preference number: 5 (lower is better)
Translates to: PNGINSEESTLQSFS*LFSTQTTKNSLAGL
Trigger: AAGGCCCGCTAATGAGTTCTTCGTTGTTTGTGTTGAGAAGAGGCAGCTGAAGGATTGGAGTGTGCTTTCTTCTGAATTTATCCCATTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587823.1
CDS-3UTR CAA 90 bp CAGAATACAAGAAACATTGCTCTGAATAAAAGAACATCGAATGGTAATGGACAGCTGCACGTGTCCCAGTaGGACAGCTGGCTCTGGTTA +
Preference number: 5 (lower is better)
Translates to: QNTRNIALNKRTSNGNGQLHVSQ*DSWLWL
Trigger: TAACCAGAGCCAGCTGTCCAACTGGGACACGTGCAG...CTGTCCATTACCATTCGATGTTCTTTTATTCAGAGCAATGTTTCTTGTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400384.7
CDS CAA 90 bp ACCTTCCGGCAGGCCCGGCTGTCCACGGCCGACAGCACCAAACCATaGACACCGAAGCCCAGGGGTTGGAAGTCAACAAAGCGCCCACCG +
Preference number: 6 (lower is better)
Translates to: TFRQARLSTADSTKP*TPKPRGWKSTKRPP
Trigger: CGGTGGGCGCTTTGTTGACTTCCAACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGTCGGCCGTGGACAGCCGGGCCTGCCGGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS TCA 72 bp AGGCCCGGCTGTCCACGGCCGACAGCACCAAACCATTaGCACCGAAGCCCAGGGGTTGGAAGTCAACAAAGC +
Preference number: 6 (lower is better)
Translates to: RPGCPRPTAPNH*HRSPGVGSQQS
Trigger: GCTTTGTTGACTTCCAACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGTCGGCCGTGGACAGCCGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CCA 72 bp GGGTACCTGGAACTGCACGTGTCCCAGTTGGACAGCTaGCTCTGGTTAGCGGCCATCAGCACGATGTCGTCG +
Preference number: 6 (lower is better)
Translates to: GYLELHVSQLDS*LWLAAISTMSS
Trigger: CGACGACATCGTGCTGATGGCCGCTAACCAGAGCCAGCTGTCCAACTGGGACACGTGCAGTTCCAGGTACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS CAA 72 bp CAGGCCCGGCTGTCCACGGCCGACAGCACCAAACCATaGACACCGAAGCCCAGGGGTTGGAAGTCAACAAAG +
Preference number: 6 (lower is better)
Translates to: QARLSTADSTKP*TPKPRGWKSTK
Trigger: CTTTGTTGACTTCCAACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGTCGGCCGTGGACAGCCGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 72 bp AGGCTCACAGGGTACCTGGAACTGCACGTGTCCCAGTaGGACAGCTGGCTCTGGTTAGCGGCCATCAGCACG +
Preference number: 6 (lower is better)
Translates to: RLTGYLELHVSQ*DSWLWLAAIST
Trigger: CGTGCTGATGGCCGCTAACCAGAGCCAGCTGTCCAACTGGGACACGTGCAGTTCCAGGTACCCTGTGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS TCA 72 bp AGAGGTGGCCCTTCCTGGAGCAACACACTCTCACCGTaGGTCAAGCTGTCATCGTGCTCCTCAGGACCTCCG +
Preference number: 6 (lower is better)
Translates to: RGGPSWSNTLSP*VKLSSCSSGPP
Trigger: CGGAGGTCCTGAGGAGCACGATGACAGCTTGACTCACGGTGAGAGTGTGTTGCTCCAGGAAGGGCCACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587823.1
CDS GCA 72 bp CACCAGCTCTCTGGAGACGAGAATGGCATATGGTCATaGTCGCTGAGCTGTGCTAGTTGGGGGCGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: HQLSGDENGIWS*SLSCASWGRRL
Trigger: CAGCCTGCGCCCCCAACTAGCACAGCTCAGCGAGCATGACCATATGCCATTCTCGTCTCCAGAGAGCTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS GCA 72 bp TCCAGGCGCCGAATGATCTTGATCTCTCGGAGCGCGTaGTTCATGCTGCGGGCATCGCTCAGGGCAATCTTC +
Preference number: 6 (lower is better)
Translates to: SRRRMILISRSA*FMLRASLRAIF
Trigger: GAAGATTGCCCTGAGCGATGCCCGCAGCATGAAGCACGCGCTCCGAGAGATCAAGATCATTCGGCGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS GCA 72 bp ACGATGTACGCCACGCTGAACTTGAACAGCTCACCCTaGAGGTCAGTGCCCTTGGGACCGAGCACCTCGTAC +
Preference number: 6 (lower is better)
Translates to: TMYATLNLNSSP*RSVPLGPSTSY
Trigger: GTACGAGGTGCTCGGTCCCAAGGGCACTGACCTGCAGGGTGAGCTGTTCAAGTTCAGCGTGGCGTACATCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS GCA 72 bp CGGCCATCAGCACGATGTCGTCGATCTCATCCTCAATaGGGAAGGGGTGTTGTGAGGTGGGCTCGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: RPSARCRRSHPQ*GRGVVRWARPQ
Trigger: CTGAGGACGAGCCCACCTCACAACACCCCTTCCGCATTGAGGATGAGATCGACGACATCGTGCTGATGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS CCA 72 bp CACTGCCACCAGCTCTCTGGAGACGAGAATGGCATATaGTCATGCTCGCTGAGCTGTGCTAGTTGGGGGCGC +
Preference number: 6 (lower is better)
Translates to: HCHQLSGDENGI*SCSLSCASWGR
Trigger: GCGCCCCCAACTAGCACAGCTCAGCGAGCATGACCATATGCCATTCTCGTCTCCAGAGAGCTGGTGGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 72 bp GGAGCTCAGCTGCCAGGCCAGGATCCTCTGGAGCCTTaGGATGTGGGCAGCATCCTCTTTCACCAGCTCATC +
Preference number: 6 (lower is better)
Translates to: GAQLPGQDPLEP*DVGSILFHQLI
Trigger: GATGAGCTGGTGAAAGAGGATGCTGCCCACATCCAAAGGCTCCAGAGGATCCTGGCCTGGCAGCTGAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 90 bp AGGTCAGTGCCCTTGGGACCGAGCACCTCGTACACTTTGACGATGTaGTCGTGGTCCAGGCGCCGAATGATCTTGATCTCTCGGAGCGCG +
Preference number: 6 (lower is better)
Translates to: RSVPLGPSTSYTLTM*SWSRRRMILISRSA
Trigger: CGCGCTCCGAGAGATCAAGATCATTCGGCGCCTGGACCACGACAACATCGTCAAAGTGTACGAGGTGCTCGGTCCCAAGGGCACTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 90 bp GTCCACGGCCGACAGCACCAAACCATTGACACCGAAGCCCAGGGGTaGGAAGTCAACAAAGCGCCCACCGAGGTCATACCCATAGACACT +
Preference number: 6 (lower is better)
Translates to: VHGRQHQTIDTEAQG*EVNKAPTEVIPIDT
Trigger: AGTGTCTATGGGTATGACCTCGGTGGGCGCTTTGTTGACTTCCAACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGTCGGCCGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 90 bp TCGTACACTTTGACGATGTTGTCGTGGTCCAGGCGCCGAATGATCTaGATCTCTCGGAGCGCGTGCTTCATGCTGCGGGCATCGCTCAGG +
Preference number: 6 (lower is better)
Translates to: SYTLTMLSWSRRRMI*ISRSACFMLRASLR
Trigger: CCTGAGCGATGCCCGCAGCATGAAGCACGCGCTCCGAGAGATCAAGATCATTCGGCGCCTGGACCACGACAACATCGTCAAAGTGTACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 90 bp TACGCCACGCTGAACTTGAACAGCTCACCCTGCAGGTCAGTGCCCTaGGGACCGAGCACCTCGTACACTTTGACGATGTTGTCGTGGTCC +
Preference number: 6 (lower is better)
Translates to: YATLNLNSSPCRSVP*GPSTSYTLTMLSWS
Trigger: GGACCACGACAACATCGTCAAAGTGTACGAGGTGCTCGGTCCCAAGGGCACTGACCTGCAGGGTGAGCTGTTCAAGTTCAGCGTGGCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS GCA 72 bp CTCCTTCCCTACTCACAGCAGCCCTTGCTTGCTCACTaGCGAATCCCTAATGGCTTGGAACAGAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: LLPYSQQPLLAH*RIPNGLEQSLG
Trigger: GCCCAGGCTCTGTTCCAAGCCATTAGGGATTCGGCAGTGAGCAAGCAAGGGCTGCTGTGAGTAGGGAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586735.1
CDS CCA 72 bp CTGGAACTGCACGTGTCCCAGTTGGACAGCTGGCTCTaGTTAGCGGCCATCAGCACGATGTCGTCGATCTCA +
Preference number: 6 (lower is better)
Translates to: LELHVSQLDSWL*LAAISTMSSIS
Trigger: TGAGATCGACGACATCGTGCTGATGGCCGCTAACCAGAGCCAGCTGTCCAACTGGGACACGTGCAGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS CAA 72 bp CGACAGCACCAAACCATTGACACCGAAGCCCAGGGGTaGGAAGTCAACAAAGCGCCCACCGAGGTCATACCC +
Preference number: 6 (lower is better)
Translates to: RQHQTIDTEAQG*EVNKAPTEVIP
Trigger: GGGTATGACCTCGGTGGGCGCTTTGTTGACTTCCAACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 72 bp TTGACGATGTTGTCGTGGTCCAGGCGCCGAATGATCTaGATCTCTCGGAGCGCGTGCTTCATGCTGCGGGCA +
Preference number: 6 (lower is better)
Translates to: LTMLSWSRRRMI*ISRSACFMLRA
Trigger: TGCCCGCAGCATGAAGCACGCGCTCCGAGAGATCAAGATCATTCGGCGCCTGGACCACGACAACATCGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 72 bp AGGTCAGTGCCCTTGGGACCGAGCACCTCGTACACTTaGACGATGTTGTCGTGGTCCAGGCGCCGAATGATC +
Preference number: 6 (lower is better)
Translates to: RSVPLGPSTSYT*TMLSWSRRRMI
Trigger: GATCATTCGGCGCCTGGACCACGACAACATCGTCAAAGTGTACGAGGTGCTCGGTCCCAAGGGCACTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 90 bp TCACCCTGCAGGTCAGTGCCCTTGGGACCGAGCACCTCGTACACTTaGACGATGTTGTCGTGGTCCAGGCGCCGAATGATCTTGATCTCT +
Preference number: 6 (lower is better)
Translates to: SPCRSVPLGPSTSYT*TMLSWSRRRMILIS
Trigger: AGAGATCAAGATCATTCGGCGCCTGGACCACGACAACATCGTCAAAGTGTACGAGGTGCTCGGTCCCAAGGGCACTGACCTGCAGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 90 bp GTCCTTGTCTTCCTCCCGGATTACAGGGATGGTCTCCAGGATGAGTaGCATCTGCTCCAGCTCATGGGCCCCAGCAAAGAGCATTCTCCC +
Preference number: 6 (lower is better)
Translates to: VLVFLPDYRDGLQDE*HLLQLMGPSKEHSP
Trigger: GGGAGAATGCTCTTTGCTGGGGCCCATGAGCTGGAGCAGATGCAACTCATCCTGGAGACCATCCCTGTAATCCGGGAGGAAGACAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS TCA 72 bp TCTCTGGAGACGAGAATGGCATATGGTCATGCTCGCTaGGCTGTGCTAGTTGGGGGCGCAGGCTGTCGTCTT +
Preference number: 6 (lower is better)
Translates to: SLETRMAYGHAR*AVLVGGAGCRL
Trigger: AAGACGACAGCCTGCGCCCCCAACTAGCACAGCTCAGCGAGCATGACCATATGCCATTCTCGTCTCCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS TCA 72 bp TGTCTTCCTCCCGGATTACAGGGATGGTCTCCAGGATaGGTTGCATCTGCTCCAGCTCATGGGCCCCAGCAA +
Preference number: 6 (lower is better)
Translates to: CLPPGLQGWSPG*VASAPAHGPQQ
Trigger: TTGCTGGGGCCCATGAGCTGGAGCAGATGCAACTCATCCTGGAGACCATCCCTGTAATCCGGGAGGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS GCA 72 bp ACAGCCACCTGCCAGGTGCTGACCATGTGCTTGGGGTaGTCCTCACCCTCTGTTTCCTTCCATTTGGTCATC +
Preference number: 6 (lower is better)
Translates to: TATCQVLTMCLG*SSPSVSFHLVI
Trigger: GATGACCAAATGGAAGGAAACAGAGGGTGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS CCA 72 bp CAGTCACCCTTCTCAGCCATTGTGGGCTCAGTGATCTaGAGCTGCCCAGGTAACACAGGGGCAGTCAGGAAA +
Preference number: 6 (lower is better)
Translates to: QSPFSAIVGSVI*SCPGNTGAVRK
Trigger: TTTCCTGACTGCCCCTGTGTTACCTGGGCAGCTCCAGATCACTGAGCCCACAATGGCTGAGAAGGGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CCA 72 bp CAACAAAGCGCCCACCGAGGTCATACCCATAGACACTaGCGATGCAGTCACCCTTCTCAGCCATTGTGGGCT +
Preference number: 6 (lower is better)
Translates to: QQSAHRGHTHRH*RCSHPSQPLWA
Trigger: AGCCCACAATGGCTGAGAAGGGTGACTGCATCGCCAGTGTCTATGGGTATGACCTCGGTGGGCGCTTTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CCA 72 bp GACAGCACCAAACCATTGACACCGAAGCCCAGGGGTTaGAAGTCAACAAAGCGCCCACCGAGGTCATACCCA +
Preference number: 6 (lower is better)
Translates to: DSTKPLTPKPRG*KSTKRPPRSYP
Trigger: TGGGTATGACCTCGGTGGGCGCTTTGTTGACTTCCAACCCCTGGGCTTCGGTGTCAATGGTTTGGTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CCA 72 bp GGACCGAGCACCTCGTACACTTTGACGATGTTGTCGTaGTCCAGGCGCCGAATGATCTTGATCTCTCGGAGC +
Preference number: 6 (lower is better)
Translates to: GPSTSYTLTMLS*SRRRMILISRS
Trigger: GCTCCGAGAGATCAAGATCATTCGGCGCCTGGACCACGACAACATCGTCAAAGTGTACGAGGTGCTCGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CCA 72 bp TTCCAACATGGTCCAGCCTCAAAGACGGATGGCCCATaGGGTCACAGTGCCCCACGAAGCTCAAAAGGACCA +
Preference number: 6 (lower is better)
Translates to: FQHGPASKTDGP*GHSAPRSSKGP
Trigger: TGGTCCTTTTGAGCTTCGTGGGGCACTGTGACCCCATGGGCCATCCGTCTTTGAGGCTGGACCATGTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586735.1
CDS CCA 72 bp CAGTGGTTTCCAACATGGTCCAGCCTCAAAGACGGATaGCCCATGGGGTCACAGTGCCCCACGAAGCTCAAA +
Preference number: 6 (lower is better)
Translates to: QWFPTWSSLKDG*PMGSQCPTKLK
Trigger: TTTGAGCTTCGTGGGGCACTGTGACCCCATGGGCCATCCGTCTTTGAGGCTGGACCATGTTGGAAACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586735.1
CDS CAA 72 bp TCCATGTACTCCTGGACGATGTACGCCACGCTGAACTaGAACAGCTCACCCTGCAGGTCAGTGCCCTTGGGA +
Preference number: 6 (lower is better)
Translates to: SMYSWTMYATLN*NSSPCRSVPLG
Trigger: TCCCAAGGGCACTGACCTGCAGGGTGAGCTGTTCAAGTTCAGCGTGGCGTACATCGTCCAGGAGTACATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 72 bp TTCCTCCCGGATTACAGGGATGGTCTCCAGGATGAGTaGCATCTGCTCCAGCTCATGGGCCCCAGCAAAGAG +
Preference number: 6 (lower is better)
Translates to: FLPDYRDGLQDE*HLLQLMGPSKE
Trigger: CTCTTTGCTGGGGCCCATGAGCTGGAGCAGATGCAACTCATCCTGGAGACCATCCCTGTAATCCGGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS CAA 90 bp CATCTTTCAGACCAAGTCTCCTTCCCTACTCACAGCAGCCCTTGCTaGCTCACTGCCGAATCCCTAATGGCTTGGAACAGAGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: HLSDQVSFPTHSSPC*LTAESLMAWNRAWA
Trigger: GGCCCAGGCTCTGTTCCAAGCCATTAGGGATTCGGCAGTGAGCAAGCAAGGGCTGCTGTGAGTAGGGAAGGAGACTTGGTCTGAAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586735.1
CDS TCA 72 bp CAAGCACCTTTCATGAGCTCTACACCAAGTTACGCCTaGGGTTCCAAATGCAGGGGAGCTCAGCTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: QAPFMSSTPSYA*GSKCRGAQLPG
Trigger: GCCTGGCAGCTGAGCTCCCCTGCATTTGGAACCTCAGGCGTAACTTGGTGTAGAGCTCATGAAAGGTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS GCA 72 bp CGGATTACAGGGATGGTCTCCAGGATGAGTTGCATCTaGTCCAGCTCATGGGCCCCAGCAAAGAGCATTCTC +
Preference number: 6 (lower is better)
Translates to: RITGMVSRMSCI*SSSWAPAKSIL
Trigger: GAGAATGCTCTTTGCTGGGGCCCATGAGCTGGAGCAGATGCAACTCATCCTGGAGACCATCCCTGTAATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000540640.3
CDS GCA 72 bp GCGGGCCTTGTGGGAGTAATGCTGATCAACGATCCTTaGCAACCCGAAATCCCCAATCTTGAGCACGAGGTC +
Preference number: 6 (lower is better)
Translates to: AGLVGVMLINDP*QPEIPNLEHEV
Trigger: GACCTCGTGCTCAAGATTGGGGATTTCGGGTTGGCAAGGATCGTTGATCAGCATTACTCCCACAAGGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587823.1
CDS CAA 72 bp CCCTTGGGACCGAGCACCTCGTACACTTTGACGATGTaGTCGTGGTCCAGGCGCCGAATGATCTTGATCTCT +
Preference number: 6 (lower is better)
Translates to: PLGPSTSYTLTM*SWSRRRMILIS
Trigger: AGAGATCAAGATCATTCGGCGCCTGGACCACGACAACATCGTCAAAGTGTACGAGGTGCTCGGTCCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 72 bp CTGAACTTGAACAGCTCACCCTGCAGGTCAGTGCCCTaGGGACCGAGCACCTCGTACACTTTGACGATGTTG +
Preference number: 6 (lower is better)
Translates to: LNLNSSPCRSVP*GPSTSYTLTML
Trigger: CAACATCGTCAAAGTGTACGAGGTGCTCGGTCCCAAGGGCACTGACCTGCAGGGTGAGCTGTTCAAGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 72 bp TGGGGGAAAGGAGCAGTCGTGGGGAACGGTACCACTTaGTTACCAACCCTTCTGACAGATAACCCGAGGCAG +
Preference number: 6 (lower is better)
Translates to: WGKGAVVGNGTT*LPTLLTDNPRQ
Trigger: CTGCCTCGGGTTATCTGTCAGAAGGGTTGGTAACAAAGTGGTACCGTTCCCCACGACTGCTCCTTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540640.3
CDS CAA 90 bp CTGACCATGTGCTTGGGGTGCTCCTCACCCTCTGTTTCCTTCCATTaGGTCATCATGATGCTCTCCCAGGATGGCTGCTGTCATTGTCCC +
Preference number: 6 (lower is better)
Translates to: LTMCLGCSSPSVSFH*VIMMLSQDGCCHCP
Trigger: GGGACAATGACAGCAGCCATCCTGGGAGAGCATCATGATGACCAAATGGAAGGAAACAGAGGGTGAGGAGCACCCCAAGCACATGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS CAA 90 bp GTGGCATCTTTCAGACCAAGTCTCCTTCCCTACTCACAGCAGCCCTaGCTTGCTCACTGCCGAATCCCTAATGGCTTGGAACAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: VASFRPSLLPYSQQP*LAHCRIPNGLEQSL
Trigger: CAGGCTCTGTTCCAAGCCATTAGGGATTCGGCAGTGAGCAAGCAAGGGCTGCTGTGAGTAGGGAAGGAGACTTGGTCTGAAAGATGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586735.1
CDS CAA 72 bp TGGGGGAAAGGAGCAGTCGTGGGGAACGGTACCACTTaGTTACCAACCCTTCTGACAGATAACCCTTGTGGG +
Preference number: 6 (lower is better)
Translates to: WGKGAVVGNGTT*LPTLLTDNPCG
Trigger: CCCACAAGGGTTATCTGTCAGAAGGGTTGGTAACAAAGTGGTACCGTTCCCCACGACTGCTCCTTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS CAA 72 bp TGCTTGGGGTGCTCCTCACCCTCTGTTTCCTTCCATTaGGTCATCATGATGCTCTCCCAGGATGGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: CLGCSSPSVSFH*VIMMLSQDGCC
Trigger: ACAGCAGCCATCCTGGGAGAGCATCATGATGACCAAATGGAAGGAAACAGAGGGTGAGGAGCACCCCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS CAA 72 bp GACCAAGTCTCCTTCCCTACTCACAGCAGCCCTTGCTaGCTCACTGCCGAATCCCTAATGGCTTGGAACAGA +
Preference number: 6 (lower is better)
Translates to: DQVSFPTHSSPC*LTAESLMAWNR
Trigger: TCTGTTCCAAGCCATTAGGGATTCGGCAGTGAGCAAGCAAGGGCTGCTGTGAGTAGGGAAGGAGACTTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586735.1
CDS CAA 90 bp TGTAGTTATTGGGGGAAAGGAGCAGTCGTGGGGAACGGTACCACTTaGTTACCAACCCTTCTGACAGATAACCCGAGGCAGAGCCCGAGA +
Preference number: 6 (lower is better)
Translates to: CSYWGKGAVVGNGTT*LPTLLTDNPRQSPR
Trigger: TCTCGGGCTCTGCCTCGGGTTATCTGTCAGAAGGGTTGGTAACAAAGTGGTACCGTTCCCCACGACTGCTCCTTTCCCCCAATAACTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540640.3
CDS CCA 72 bp CTAGTTGGGGGCGCAGGCTGTCGTCTTAACCTGCATTaGGAGGGCTGTCTACTAATTCCTGTGTTTCCTGAA +
Preference number: 6 (lower is better)
Translates to: LVGGAGCRLNLH*EGCLLIPVFPE
Trigger: TTCAGGAAACACAGGAATTAGTAGACAGCCCTCCCAATGCAGGTTAAGACGACAGCCTGCGCCCCCAACTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 72 bp TTCAGACCAAGTCTCCTTCCCTACTCACAGCAGCCCTaGCTTGCTCACTGCCGAATCCCTAATGGCTTGGAA +
Preference number: 6 (lower is better)
Translates to: FRPSLLPYSQQP*LAHCRIPNGLE
Trigger: TTCCAAGCCATTAGGGATTCGGCAGTGAGCAAGCAAGGGCTGCTGTGAGTAGGGAAGGAGACTTGGTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586735.1
CDS CAA 90 bp GAGTGGGTAATAATAACAGCCACCTGCCAGGTGCTGACCATGTGCTaGGGGTGCTCCTCACCCTCTGTTTCCTTCCATTTGGTCATCATG +
Preference number: 6 (lower is better)
Translates to: EWVIITATCQVLTMC*GCSSPSVSFHLVIM
Trigger: CATGATGACCAAATGGAAGGAAACAGAGGGTGAGGAGCACCCCAAGCACATGGTCAGCACCTGGCAGGTGGCTGTTATTATTACCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS GCA 72 bp TCGCCCAAGACTGTATTCCACTGCACCAAGAGAGGCTaGAGGAATGTGGCATCTTTCAGACCAAGTCTCCTT +
Preference number: 6 (lower is better)
Translates to: SPKTVFHCTKRG*RNVASFRPSLL
Trigger: AAGGAGACTTGGTCTGAAAGATGCCACATTCCTGCAGCCTCTCTTGGTGCAGTGGAATACAGTCTTGGGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400384.7
ENST00000586735.1
ENST00000588540.1
ENST00000592595.5
CDS GCA 72 bp TTCCATTTGGTCATCATGATGCTCTCCCAGGATGGCTaGTGTCATTGTCCCTGCTCCACAGAAGAGGATGCA +
Preference number: 6 (lower is better)
Translates to: FHLVIMMLSQDG*CHCPCSTEEDA
Trigger: TGCATCCTCTTCTGTGGAGCAGGGACAATGACAGCAGCCATCCTGGGAGAGCATCATGATGACCAAATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS CCA 72 bp TTCCTTCCATTTGGTCATCATGATGCTCTCCCAGGATaGCTGCTGTCATTGTCCCTGCTCCACAGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: FLPFGHHDALPG*LLSLSLLHRRG
Trigger: TCCTCTTCTGTGGAGCAGGGACAATGACAGCAGCCATCCTGGGAGAGCATCATGATGACCAAATGGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS CAA 72 bp AGCTGTCATCGTGCTCCTCAGGACCTCCGCATACTCTaGAGGTGGTTCCTGACCTTTCTTAAGCCTTACACA +
Preference number: 6 (lower is better)
Translates to: SCHRAPQDLRIL*RWFLTFLKPYT
Trigger: TGTGTAAGGCTTAAGAAAGGTCAGGAACCACCTCAAGAGTATGCGGAGGTCCTGAGGAGCACGATGACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587823.1
CDS CAA 72 bp CTGATTTCCATCGCTGATCTTCCAGCTGAGTGGCATTaGGTTAACACAGAACCTCTGAGCCCCAGGCTCAAC +
Preference number: 6 (lower is better)
Translates to: LISIADLPAEWH*VNTEPLSPRLN
Trigger: GTTGAGCCTGGGGCTCAGAGGTTCTGTGTTAACCAAATGCCACTCAGCTGGAAGATCAGCGATGGAAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586735.1
CDS GCA 72 bp GCTGTGTCACAGCCTCTTTCTGTGTTCCAAGCAGTATaGAGGGATCCCATCAATGAATTCTGGAGGCATCCA +
Preference number: 6 (lower is better)
Translates to: AVSQPLSVFQAV*RDPINEFWRHP
Trigger: TGGATGCCTCCAGAATTCATTGATGGGATCCCTGCATACTGCTTGGAACACAGAAAGAGGCTGTGACACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS GCA 72 bp AGTAGACTTGTGGGAGTAATGCTGATCAACGATCCTTaGCAACCCGAAATCCCCAATCTTGAGCACGAGGTC +
Preference number: 6 (lower is better)
Translates to: SRLVGVMLINDP*QPEIPNLEHEV
Trigger: GACCTCGTGCTCAAGATTGGGGATTTCGGGTTGGCAAGGATCGTTGATCAGCATTACTCCCACAAGTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS CCA 72 bp TTCCAAGCAGTATGCAGGGATCCCATCAATGAATTCTaGAGGCATCCAGGGGCTTCTTTCTACCTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: FQAVCRDPINEF*RHPGASFYLSC
Trigger: ACAGGAGAGGTAGAAAGAAGCCCCTGGATGCCTCCAGAATTCATTGATGGGATCCCTGCATACTGCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS CAA 90 bp TGTAGTTATTGGGGGAAAGGAGCAGTCGTGGGGAACGGTACCACTTaGTTACCAACCCTTCTGACAGATAACCCTTGTGGGAGTAATGCT +
Preference number: 6 (lower is better)
Translates to: CSYWGKGAVVGNGTT*LPTLLTDNPCGSNA
Trigger: AGCATTACTCCCACAAGGGTTATCTGTCAGAAGGGTTGGTAACAAAGTGGTACCGTTCCCCACGACTGCTCCTTTCCCCCAATAACTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400384.7
ENST00000592595.5
CDS TCA 72 bp TTCTGTGTTCCAAGCAGTATGCAGGGATCCCATCAATaGATTCTGGAGGCATCCAGGGGCTTCTTTCTACCT +
Preference number: 6 (lower is better)
Translates to: FCVPSSMQGSHQ*ILEASRGFFLP
Trigger: AGGTAGAAAGAAGCCCCTGGATGCCTCCAGAATTCATTGATGGGATCCCTGCATACTGCTTGGAACACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400384.7
ENST00000588540.1
ENST00000592595.5
CDS TCA 72 bp TCCCTGACTTCTCCCTTCTCAGAAGGCTCTGGAATGTaGCCCACAATGCTTGTGATGCAATCAGTAGACTTG +
Preference number: 6 (lower is better)
Translates to: SLTSPFSEGSGM*PTMLVMQSVDL
Trigger: CAAGTCTACTGATTGCATCACAAGCATTGTGGGTCACATTCCAGAGCCTTCTGAGAAGGGAGAAGTCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588540.1
CDS TCA 72 bp ACCATGCATTTAGCTGATGCTCTGCTGTCGCTGTCTTaGATTTCTTCATCATTTGTGAACAAGGAGCATGAA +
Preference number: 6 (lower is better)
Translates to: TMHLADALLSLS*ISSSFVNKEHE
Trigger: TTCATGCTCCTTGTTCACAAATGATGAAGAAATTCAAGACAGCGACAGCAGAGCATCAGCTAAATGCATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586735.1