Pregenerated sensors for MAPK1IP1L (Homo sapiens)
Ensembl gene IDs: ENSG00000168175Ensembl transcript IDs: ENST00000395468.9, ENST00000553976.1, ENST00000556515.1, ENST00000622254.1
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCACAATGGACACCATGTTGCTGAGAGGGTTTGCGGAGGAAGGGTaGTTTCCAGATATCCTTAGTGAATGCAGGTCACATGCAAAGAGG | + |
|
Preference number: 1 (lower is better) Translates to: TTMDTMLLRGFAEEG*FPDILSECRSHAKR Trigger: CCTCTTTGCATGTGACCTGCATTCACTAAGGATATCTGGAAACCACCCTTCCTCCGCAAACCCTCTCAGCAACATGGTGTCCATTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR TCA 90 bp | GCTGGCAAAGAACCTGGATCAAGGACATATTGTCTACTGAATAAATaGCTCAGATGTTTTCGACAGCCAGAAGCTTGCCTGCCATTTACA | + |
|
Preference number: 1 (lower is better) Translates to: AGKEPGSRTYCLLNK*LRCFRQPEACLPFT Trigger: TGTAAATGGCAGGCAAGCTTCTGGCTGTCGAAAACATCTGAGTCATTTATTCAGTAGACAATATGTCCTTGATCCAGGTTCTTTGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR TCA 90 bp | GCAGCCATCTCACTTTTCACATTACTTTATCCCTCCATGGTTAACTaGCATTTTGATATTGATAATTCAAGCCAAGGCTACCTGCCTTGT | + |
|
Preference number: 1 (lower is better) Translates to: AAISLFTLLYPSMVN*HFDIDNSSQGYLPC Trigger: ACAAGGCAGGTAGCCTTGGCTTGAATTATCAATATCAAAATGTCAGTTAACCATGGAGGGATAAAGTAATGTGAAAAGTGAGATGGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR TCA 90 bp | ACCAGTTGCAAAGTCCTTGAAAACAAAGGGAGTACAATAGCAGTATaGTTTAGGGCACACTGGACAGTATGGGTCACTAGCAAAATTATT | + |
|
Preference number: 1 (lower is better) Translates to: TSCKVLENKGSTIAV*FRAHWTVWVTSKII Trigger: AATAATTTTGCTAGTGACCCATACTGTCCAGTGTGCCCTAAATCATACTGCTATTGTACTCCCTTTGTTTTCAAGGACTTTGCAACTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR TCA 90 bp | ATGAATGGGTATGCTAACAAATTCTGTAATGTTACTTATAGACTATaGGCCTCTCAAGGACAGGGATTCCCTTATAGCTGGCAAAGAACC | + |
|
Preference number: 1 (lower is better) Translates to: MNGYANKFCNVTYRL*ASQGQGFPYSWQRT Trigger: GGTTCTTTGCCAGCTATAAGGGAATCCCTGTCCTTGAGAGGCTCATAGTCTATAAGTAACATTACAGAATTTGTTAGCATACCCATTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR TCA 90 bp | AGAAAATTGAGACATTGGCACTTATTGTTTAGAAGTGTAGGCAATTaGCTGATATTCAACCCAGGCACAGTCTTGACAAAAACTCTGAGT | + |
|
Preference number: 1 (lower is better) Translates to: RKLRHWHLLFRSVGN*LIFNPGTVLTKTLS Trigger: ACTCAGAGTTTTTGTCAAGACTGTGCCTGGGTTGAATATCAGTCAATTGCCTACACTTCTAAACAATAAGTGCCAATGTCTCAATTTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATGCCAGCGAAATCTCCAAGTCAGTATCTGCTaGTCAGTGACAGGCAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: FIHCPTEIGSSKECQRNLQVSIC*SVTGSE Trigger: TTCACTGCCTGTCACTGATCAGCAGATACTGACTTG...GAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCAGTTGCTGAGAGGGTTTaGGGAGGAAGGGTGGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GKMVNSKFNNVTLTKCVAVAERV*GGRVVS Trigger: GGAAACCACCCTTCCTCCGCAAACCCTCTCAGCAAC...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCAGCTGAGGCAGGAGAATaGTGTGAACCTGGGAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: GKMVNSKFNNVTLTKCVAAEAGE*CEPGRW Trigger: CCATCTCCCAGGTTCACACCATTCTCCTGCCTCAGC...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCAGGCAGAAGAATCGTTTaGACCTGGAGGCAGAGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: GKMVNSKFNNVTLTKCVAGRRIV*TWRQRL Trigger: CAACCTCTGCCTCCAGGTTCAAACGATTCTTCTGCC...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATGCCAGCGAAATCTCAGTACAATAGCAGTATaGTTTAGGGCACACTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: FIHCPTEIGSSKECQRNLSTIAV*FRAHWT Trigger: TGTCCAGTGTGCCCTAAATCATACTGCTATTGTACT...GAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CCA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGCTACAGGGAACGCTCTaGGCAAAAGAGCTGCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: YCFIKIKVFPERHLQLSMLQGTL*AKELPQ Trigger: CTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAG...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR TCA 90 bp | ACTCAGATGTTTTCGACAGCCAGAAGCTTGCCTGCCATTTACAAAATACTGATTACAAGCCAAGGTCTTTaGAGTGCTCCACTTGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: TQMFSTARSLPAIYKILITSQGL*SAPLDS Trigger: AGAATCAAGTGGAGCACTTCAAAGACCTTGGCTTGT...AATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCGAAAACATCTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATGCCAGCGAAATCTCGCAACACAGTCACACTaGTTTAAACTTAGTTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: FIHCPTEIGSSKECQRNLATQSH*FKLSCR Trigger: TCTGCAACTAAGTTTAAAGCAGTGTGACTGTGTTGC...GAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATGCCAGCGAAATCTCCCCCCAAATACCAGTTaGAAAGTCCTTGAAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: FIHCPTEIGSSKECQRNLPPNTS*KVLENK Trigger: TTTGTTTTCAAGGACTTTGCAACTGGTATTTGGGGG...GAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATGAA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATGCCAGCGAAATCTCAGCCAGAAGCTTGCCTaGCATTTACAAAATACTGAT | + |
|
Preference number: 2 (lower is better) Translates to: FIHCPTEIGSSKECQRNLSQKLA*HLQNTD Trigger: ATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCT...GAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR TCA 90 bp | ACTCAGATGTTTTCGACAGCCAGAAGCTTGCCTGCCATTTACAAAATACTGATTAAAAGCATGAAAAGATaGGAAAGTGGCAGGATGGGA | + |
|
Preference number: 2 (lower is better) Translates to: TQMFSTARSLPAIYKILIKSMKR*ESGRMG Trigger: TCCCATCCTGCCACTTTCTCATCTTTTCATGCTTTT...AATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCGAAAACATCTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCACTAAAACGCCTGCTTTTCTTAACTCCACACCGAACCAACCTGAAATATGCACACTGGACAGTATaGGTCACTAGCAAAATTATT | + |
|
Preference number: 2 (lower is better) Translates to: SPLKRLLFLTPHRTNLKYAHWTV*VTSKII Trigger: AATAATTTTGCTAGTGACCCATACTGTCCAGTGTGC...ATATTTCAGGTTGGTTCGGTGTGGAGTTAAGAAAAGCAGGCGTTTTAGTGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCATTTGCGGAGGAAGGGTaGTTTCCAGATATCCTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: GKMVNSKFNNVTLTKCVAFAEEG*FPDILS Trigger: ACTAAGGATATCTGGAAACCACCCTTCCTCCGCAAA...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR TCA 90 bp | ACTCAGATGTTTTCGACAGCCAGAAGCTTGCCTGCCATTTACAAAATACTGATTGCTAACACCTGTCCTTaGAGAGAAGTGAAAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: TQMFSTARSLPAIYKILIANTCP*REVKEK Trigger: TTTTTCTTTCACTTCTCTTCAAGGACAGGTGTTAGC...AATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCGAAAACATCTGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCAGATATCCTTAGTGAATaGAGGTCACATGCAAAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: GKMVNSKFNNVTLTKCVADILSE*RSHAKR Trigger: CCTCTTTGCATGTGACCTGCATTCACTAAGGATATC...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CCA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGATACAAAAATGGGTGTaGTGGCGGGCACCTGTAATC | + |
|
Preference number: 2 (lower is better) Translates to: YCFIKIKVFPERHLQLSMIQKWV*WRAPVI Trigger: GATTACAGGTGCCCGCCACCACACCCATTTTTGTAT...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR TCA 90 bp | CTATCTTTGCAGCCATCTCACTTTTCACATTACTTTATCCCTCCATGGTTAACTCAACAAATACAGAACTaGACTGTTAGCCATAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LSLQPSHFSHYFIPPWLTQQIQN*TVSHKH Trigger: GTGCTTATGGCTAACAGTTCAGTTCTGTATTTGTTG...AGTTAACCATGGAGGGATAAAGTAATGTGAAAAGTGAGATGGCTGCAAAGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR TCA 90 bp | CTATCTTTGCAGCCATCTCACTTTTCACATTACTTTATCCCTCCATGGTTAACTGGGATGATTAAACACTaGATGTTCCTCTCAAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LSLQPSHFSHYFIPPWLTGMIKH*MFLSKV Trigger: TACCTTTGAGAGGAACATTCAGTGTTTAATCATCCC...AGTTAACCATGGAGGGATAAAGTAATGTGAAAAGTGAGATGGCTGCAAAGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CCA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGTATGTTTTAGACCCCTaGAGTGTGCCAGTTTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: YCFIKIKVFPERHLQLSMYVLDP*SVPVYH Trigger: GTGGTAAACTGGCACACTCCAGGGGTCTAAAACATA...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAGATGTTTTCGACAGCCAGAAGCTTGCCTGCCATTTACAAAATACTGATTAGTCAGAGCTGTAAATaGTGTCTTCAAAAGCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: TQMFSTARSLPAIYKILISQSCK*CLQKHE Trigger: TTCATGCTTTTGAAGACACCATTTACAGCTCTGACT...AATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCGAAAACATCTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCTGCTATCTCTTCTTCCTATGCAGTAGACAATaGCATAGCTTAACCAGACTC | + |
|
Preference number: 2 (lower is better) Translates to: PKSMDFIIIDSQTCYLFFLCSRQ*HSLTRL Trigger: GAGTCTGGTTAAGCTATGTCATTGTCTACTGCATAG...GAAGAAGAGATAGCAGGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR TCA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGAAGAAACAGCATTCCTaGACACCTCAACTATTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: YCFIKIKVFPERHLQLSMKKQHS*TPQLFP Trigger: TGGAAATAGTTGAGGTGTTCAGGAATGCTGTTTCTT...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR CAA 90 bp | GTCACTAGCAAAATTATTATACTTATAGGGAGTAATAATCCCAAATaGTGTTCATGGCCCTTCAAATCCTTTAGCAACAGATTTTCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: VTSKIIILIGSNNPK*CSWPFKSFSNRFSP Trigger: GGGAGAAAATCTGTTGCTAAAGGATTTGAAGGGCCATGAACACAATTTGGGATTATTACTCCCTATAAGTATAATAATTTTGCTAGTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR GCA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGTATTTTGGCCCAGAATaGCAACAAGAATTGAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: YCFIKIKVFPERHLQLSMYFGPE*QQELKK Trigger: TTTCTTCAATTCTTGTTGGCATTCTGGGCCAAAATA...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR CCA 72 bp | GACACCATGTTGCTGAGAGGGTTTGCGGAGGAAGGGTaGTTTCCAGATATCCTTAGTGAATGCAGGTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: DTMLLRGFAEEG*FPDILSECRSH Trigger: ATGTGACCTGCATTCACTAAGGATATCTGGAAACCACCCTTCCTCCGCAAACCCTCTCAGCAACATGGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR TCA 72 bp | AAGAAGAGAAAATCACCACAATGGACACCATGTTGCTaGGAGGGTTTGCGGAGGAAGGGTGGTTTCCAGATA | + |
|
Preference number: 3 (lower is better) Translates to: KKRKSPQWTPCC*EGLRRKGGFQI Trigger: TATCTGGAAACCACCCTTCCTCCGCAAACCCTCTCAGCAACATGGTGTCCATTGTGGTGATTTTCTCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR CCA 72 bp | GCATGCCACATGTCACCCTTTAAGATGCCCAAAGGCTaGTTACAATTTCCACCAGTAGTGATCCTAACACGT | + |
|
Preference number: 3 (lower is better) Translates to: ACHMSPFKMPKG*LQFPPVVILTR Trigger: ACGTGTTAGGATCACTACTGGTGGAAATTGTAACCAGCCTTTGGGCATCTTAAAGGGTGACATGTGGCATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR GCA 72 bp | ATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATaGCAGCGAAATCTCCTGTGGGAAAATGGTAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: IHCPTEIGSSKE*QRNLLWENGKL Trigger: GAGTTTACCATTTTCCCACAGGAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR TCA 72 bp | AAAGTCCTTGAAAACAAAGGGAGTACAATAGCAGTATaGTTTAGGGCACACTGGACAGTATGGGTCACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: KVLENKGSTIAV*FRAHWTVWVTS Trigger: GCTAGTGACCCATACTGTCCAGTGTGCCCTAAATCATACTGCTATTGTACTCCCTTTGTTTTCAAGGACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATGCCAGCGAAATCTCCTAGCATGTCTTGTTTaGAAAGCAACATTGTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FIHCPTEIGSSKECQRNLLACLV*KATLFP Trigger: AGGGAACAATGTTGCTTTCAAAACAAGACATGCTAG...GAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCACTAAAACGCCTGCTTTTCTTAACTCCACACCGAACCAACCTGAAATATGGGAATGAAAATTACTaGTTGCAGTTAAGCAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: SPLKRLLFLTPHRTNLKYGNENY*LQLSNS Trigger: GGAATTGCTTAACTGCAACAAGTAATTTTCATTCCC...ATATTTCAGGTTGGTTCGGTGTGGAGTTAAGAAAAGCAGGCGTTTTAGTGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR CCA 72 bp | TCCTTTTTGACAACAAATTTACAGTTAATTAGGCTCTaGACTTGCTCAGAGAAGCCCAGAATTGGGCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SFLTTNLQLIRL*TCSEKPRIGPK Trigger: TTTAGGCCCAATTCTGGGCTTCTCTGAGCAAGTCCAGAGCCTAATTAACTGTAAATTTGTTGTCAAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAACAGATTTTCTCCCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCACTAAGGGGGCTACTTaGACAACAGAGTTCAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: ATDFLPKSMDFIIIDSQTTKGAT*TTEFNS Trigger: ACTGTTGAACTCTGTTGTCAAAGTAGCCCCCTTAGT...GGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGGGAGAAAATCTGTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGAACCCAGGCACAGTCTaGACAAAAACTCTGAGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: YCFIKIKVFPERHLQLSMNPGTV*TKTLSR Trigger: TCTACTCAGAGTTTTTGTCAAGACTGTGCCTGGGTT...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR TCA 72 bp | TATGCTAACAAATTCTGTAATGTTACTTATAGACTATaGGCCTCTCAAGGACAGGGATTCCCTTATAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: YANKFCNVTYRL*ASQGQGFPYSW Trigger: CCAGCTATAAGGGAATCCCTGTCCTTGAGAGGCTCATAGTCTATAAGTAACATTACAGAATTTGTTAGCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR TCA 72 bp | AGTGAAGAGGCAAACTATCCTGTTACTTTGCACACTTaGATTGTTGCGCTGATCAACACTACAATCTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SEEANYPVTLHT*IVALINTTILK Trigger: TTTCAAGATTGTAGTGTTGATCAGCGCAACAATTCAAGTGTGCAAAGTAACAGGATAGTTTGCCTCTTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCATAAATCAGTTTCAGCCTAGCATGTCTTGTTTTGAAAGCAACATTGTTCCCAGTAATAATCCCAAATaGTGTTCATGGCCCTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SINQFQPSMSCFESNIVPSNNPK*CSWPFK Trigger: TTTGAAGGGCCATGAACACAATTTGGGATTATTACT...GGGAACAATGTTGCTTTCAAAACAAGACATGCTAGGCTGAAACTGATTTATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGTCAAAAGCTGTATATTaGAGAGTACCCCAGGTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YCFIKIKVFPERHLQLSMSKAVY*RVPQVA Trigger: TGCTACCTGGGGTACTCTCAAATATACAGCTTTTGA...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGAGACATTGGCACTTATaGTTTAGAAGTGTAGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: YCFIKIKVFPERHLQLSMRHWHL*FRSVGN Trigger: ATTGCCTACACTTCTAAACAATAAGTGCCAATGTCT...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR TCA 72 bp | TCACTTTTCACATTACTTTATCCCTCCATGGTTAACTaGCATTTTGATATTGATAATTCAAGCCAAGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SLFTLLYPSMVN*HFDIDNSSQGY Trigger: GTAGCCTTGGCTTGAATTATCAATATCAAAATGTCAGTTAACCATGGAGGGATAAAGTAATGTGAAAAGTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGAGACGCGGGCGCAGCCTaGCTGACGGCAGCTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGDAGAA*LTAARA Trigger: TGCTCTAGCTGCCGTCAGTCAGGCTGCGCCCGCGTC...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000395468.9 ENST00000622254.1 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGACTACAGGGAACGCTCTaGGCAAAAGAGCTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGLQGTL*AKELPQ Trigger: CTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAG...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000395468.9 ENST00000622254.1 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGAATCAGTGACAGGCAGTaGAAGTGCCTTTATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGISDRQ*KCLYPG Trigger: CCCTGGATAAAGGCACTTTCACTGCCTGTCACTGAT...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000395468.9 ENST00000622254.1 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGAGTATCTGCTGATCAGTaGCAGGCAGTGAAAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGVSADQ*QAVKVP Trigger: AGGCACTTTCACTGCCTGTCACTGATCAGCAGATAC...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000395468.9 ENST00000622254.1 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGATTGAAGTGCTCCACTTaGTTCTTGAGAACCGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGLKCST*FLRTGC Trigger: ACACCCGGTTCTCAAGAATCAAGTGGAGCACTTCAA...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGACAAGTCAGTATCTGCTaGTCAGTGACAGGCAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGQVSIC*SVTGSE Trigger: TTCACTGCCTGTCACTGATCAGCAGATACTGACTTG...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000395468.9 ENST00000622254.1 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGAAGAAGTGTAGGCAATTaGCTGATATTCAACCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGRSVGN*LIFNPG Trigger: GCCTGGGTTGAATATCAGTCAATTGCCTACACTTCT...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGATATGTTTTAGACCCCTaGAGTGTGCCAGTTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGYVLDP*SVPVYH Trigger: GTGGTAAACTGGCACACTCCAGGGGTCTAAAACATA...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000395468.9 ENST00000622254.1 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGACTAAAAATACAAAAATaGGTGTGGTGGCGGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGLKIQK*VWWRAP Trigger: AGGTGCCCGCCACCACACCCATTTTTGTATTTTTAG...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCAGACGCGGGCGCAGCCTaGCTGACGGCAGCTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKMVNSKFNNVTLTKCVADAGAA*LTAARA Trigger: TGCTCTAGCTGCCGTCAGTCAGGCTGCGCCCGCGTC...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGACTATGCAGTAGACAATaGCATAGCTTAACCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGLCSRQ*HSLTRL Trigger: GAGTCTGGTTAAGCTATGTCATTGTCTACTGCATAG...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000395468.9 ENST00000622254.1 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGAGTTACTTTGCACACTTaGATTGTTGCGCTGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGVTLHT*IVALIN Trigger: GTTGATCAGCGCAACAATTCAAGTGTGCAAAGTAAC...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGACAACAAATACAGAACTaGACTGTTAGCCATAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGQQIQN*TVSHKH Trigger: GTGCTTATGGCTAACAGTTCAGTTCTGTATTTGTTG...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000395468.9 ENST00000622254.1 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGAAAGAAACAGCATTCCTaGACACCTCAACTATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGKKQHS*TPQLFP Trigger: TGGAAATAGTTGAGGTGTTCAGGAATGCTGTTTCTT...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR GCA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGAGCAACACAGTCACACTaGTTTAAACTTAGTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GWLQGTLWAKELPQVFVGATQSH*FKLSCR Trigger: TCTGCAACTAAGTTTAAAGCAGTGTGACTGTGTTGC...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000395468.9 ENST00000622254.1 |
||
| CDS-3UTR GCA 90 bp | ACTCAGATGTTTTCGACAGCCAGAAGCTTGCCTGCCATTTACAAAATACTGATTCCTGGAGGCAGAGGTTaGAGCGAGCCAAGATCACGC | + |
|
Preference number: 4 (lower is better) Translates to: TQMFSTARSLPAIYKILIPGGRG*SEPRSR Trigger: GCGTGATCTTGGCTCGCTGCAACCTCTGCCTCCAGG...AATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCGAAAACATCTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAGATGTTTTCGACAGCCAGAAGCTTGCCTGCCATTTACAAAATACTGATTGGGAGTTCCAAGGAATaGCAGCGAAATCTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQMFSTARSLPAIYKILIGSSKE*QRNLLW Trigger: CCACAGGAGATTTCGCTGGCATTCCTTGGAACTCCC...AATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCGAAAACATCTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCACTACAGGGAACGCTCTaGGCAAAAGAGCTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKMVNSKFNNVTLTKCVALQGTL*AKELPQ Trigger: CTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAG...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | TTCATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATGCCAGCGAAATCTCAATCAAAGTCTTCCCTaGACGCCACCTACAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FIHCPTEIGSSKECQRNLNQSLP*TPPTTF Trigger: GAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATT...GAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | TTCATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATGCCAGCGAAATCTCGTTACTTATAGACTATaGGCCTCTCAAGGACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FIHCPTEIGSSKECQRNLVTYRL*ASQGQG Trigger: TCCCTGTCCTTGAGAGGCTCATAGTCTATAAGTAAC...GAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | ACTCAGATGTTTTCGACAGCCAGAAGCTTGCCTGCCATTTACAAAATACTGATTATCAGTGACAGGCAGTaGAAGTGCCTTTATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQMFSTARSLPAIYKILIISDRQ*KCLYPG Trigger: CCCTGGATAAAGGCACTTTCACTGCCTGTCACTGAT...AATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCGAAAACATCTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR GCA 90 bp | TTCATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATGCCAGCGAAATCTCCGACAGCCAGAAGCTTaGCTGCCATTTACAAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: FIHCPTEIGSSKECQRNLRQPEA*LPFTKY Trigger: GTATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCG...GAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CCA 90 bp | TTCATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATGCCAGCGAAATCTCTTTGCGGAGGAAGGGTaGTTTCCAGATATCCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIHCPTEIGSSKECQRNLFAEEG*FPDILS Trigger: ACTAAGGATATCTGGAAACCACCCTTCCTCCGCAAA...GAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCACTAAAACGCCTGCTTTTCTTAACTCCACACCGAACCAACCTGAAATATCACACCGAACCAACCTaGAATATTTTGGCCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLKRLLFLTPHRTNLKYHTEPT*NILAQN Trigger: ATTCTGGGCCAAAATATTTCAGGTTGGTTCGGTGTG...ATATTTCAGGTTGGTTCGGTGTGGAGTTAAGAAAAGCAGGCGTTTTAGTGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGTGGACACCATGTTGCTaGGAGGGTTTGCGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YCFIKIKVFPERHLQLSMWTPCC*EGLRRK Trigger: CTTCCTCCGCAAACCCTCTCAGCAACATGGTGTCCA...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR GCA 90 bp | GCAACAGATTTTCTCCCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCGTTGCTGAGAGGGTTTaGGGAGGAAGGGTGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ATDFLPKSMDFIIIDSQTVAERV*GGRVVS Trigger: GGAAACCACCCTTCCTCCGCAAACCCTCTCAGCAAC...GGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGGGAGAAAATCTGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCACTAAAACGCCTGCTTTTCTTAACTCCACACCGAACCAACCTGAAATATTATGTTTTAGACCCCTaGAGTGTGCCAGTTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPLKRLLFLTPHRTNLKYYVLDP*SVPVYH Trigger: GTGGTAAACTGGCACACTCCAGGGGTCTAAAACATA...ATATTTCAGGTTGGTTCGGTGTGGAGTTAAGAAAAGCAGGCGTTTTAGTGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CCA 90 bp | CCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCTGCTATCTCTTCTTCGCTGAGGCAGGAGAATaGTGTGAACCTGGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: PKSMDFIIIDSQTCYLFFAEAGE*CEPGRW Trigger: CCATCTCCCAGGTTCACACCATTCTCCTGCCTCAGC...GAAGAAGAGATAGCAGGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | CTATCTTTGCAGCCATCTCACTTTTCACATTACTTTATCCCTCCATGGTTAACTCAAGTCAGTATCTGCTaGTCAGTGACAGGCAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLQPSHFSHYFIPPWLTQVSIC*SVTGSE Trigger: TTCACTGCCTGTCACTGATCAGCAGATACTGACTTG...AGTTAACCATGGAGGGATAAAGTAATGTGAAAAGTGAGATGGCTGCAAAGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCACTAAAACGCCTGCTTTTCTTAACTCCACACCGAACCAACCTGAAATATCAGCGAAATCTCCTGTaGGAAAATGGTAAACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPLKRLLFLTPHRTNLKYQRNLL*ENGKLQ Trigger: TTGGAGTTTACCATTTTCCCACAGGAGATTTCGCTG...ATATTTCAGGTTGGTTCGGTGTGGAGTTAAGAAAAGCAGGCGTTTTAGTGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | TCCATAAATCAGTTTCAGCCTAGCATGTCTTGTTTTGAAAGCAACATTGTTCCCCTAAGGGGGCTACTTTaGCAACAGAGTTCAACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SINQFQPSMSCFESNIVPLRGLL*QQSSTV Trigger: TACTGTTGAACTCTGTTGTCAAAGTAGCCCCCTTAG...GGGAACAATGTTGCTTTCAAAACAAGACATGCTAGGCTGAAACTGATTTATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGGCTCCACTTGATTCTTaGGAACCGGGTGTGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: YCFIKIKVFPERHLQLSMAPLDS*EPGVND Trigger: GTCATTCACACCCGGTTCTCAAGAATCAAGTGGAGC...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | GCAACAGATTTTCTCCCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCGTATCTGCTGATCAGTaGCAGGCAGTGAAAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATDFLPKSMDFIIIDSQTVSADQ*QAVKVP Trigger: AGGCACTTTCACTGCCTGTCACTGATCAGCAGATAC...GGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGGGAGAAAATCTGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAGATGTTTTCGACAGCCAGAAGCTTGCCTGCCATTTACAAAATACTGATTTGTCACCCTTTAAGATaGCCAAAGGCTGGTTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: TQMFSTARSLPAIYKILICHPLR*PKAGYN Trigger: ATTGTAACCAGCCTTTGGGCATCTTAAAGGGTGACA...AATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCGAAAACATCTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CCA 90 bp | TTCATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATGCCAGCGAAATCTCAGTCAGAGCTGTAAATaGTGTCTTCAAAAGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FIHCPTEIGSSKECQRNLSQSCK*CLQKHE Trigger: TTCATGCTTTTGAAGACACCATTTACAGCTCTGACT...GAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCAGGATTCCCTTATAGCTaGCAAAGAACCTGGATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKMVNSKFNNVTLTKCVAGFPYS*QRTWIK Trigger: CTTGATCCAGGTTCTTTGCCAGCTATAAGGGAATCC...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | TCCATAAATCAGTTTCAGCCTAGCATGTCTTGTTTTGAAAGCAACATTGTTCCCCTATGCAGTAGACAATaGCATAGCTTAACCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SINQFQPSMSCFESNIVPLCSRQ*HSLTRL Trigger: GAGTCTGGTTAAGCTATGTCATTGTCTACTGCATAG...GGGAACAATGTTGCTTTCAAAACAAGACATGCTAGGCTGAAACTGATTTATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCAAGTACAATAGCAGTATaGTTTAGGGCACACTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GKMVNSKFNNVTLTKCVASTIAV*FRAHWT Trigger: TGTCCAGTGTGCCCTAAATCATACTGCTATTGTACT...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | ACTCAGATGTTTTCGACAGCCAGAAGCTTGCCTGCCATTTACAAAATACTGATTCAGTTGCAAAGTCCTTaGAAACAAAGGGAGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: TQMFSTARSLPAIYKILIQLQSP*KQREYN Trigger: ATTGTACTCCCTTTGTTTTCAAGGACTTTGCAACTG...AATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCGAAAACATCTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | CCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCTGCTATCTCTTCTTCAGAACCGGGTGTGAATaGCGACCTAAGGTCTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PKSMDFIIIDSQTCYLFFRTGCE*RPKVYV Trigger: AACATAGACCTTAGGTCGTCATTCACACCCGGTTCT...GAAGAAGAGATAGCAGGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCAAAAAGCATGAAAAGATaGGAAAGTGGCAGGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKMVNSKFNNVTLTKCVAKSMKR*ESGRMG Trigger: TCCCATCCTGCCACTTTCTCATCTTTTCATGCTTTT...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCAGGTGGTGGGACTGACTaGGGCAAAATATATACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKMVNSKFNNVTLTKCVAGGGTD*GKIYTF Trigger: AAAAGTATATATTTTGCCTCAGTCAGTCCCACCACC...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAGATGTTTTCGACAGCCAGAAGCTTGCCTGCCATTTACAAAATACTGATTGCAACACAGTCACACTaGTTTAAACTTAGTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQMFSTARSLPAIYKILIATQSH*FKLSCR Trigger: TCTGCAACTAAGTTTAAAGCAGTGTGACTGTGTTGC...AATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCGAAAACATCTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CCA 90 bp | CTATCTTTGCAGCCATCTCACTTTTCACATTACTTTATCCCTCCATGGTTAACTAAGATGCCCAAAGGCTaGTTACAATTTCCACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLQPSHFSHYFIPPWLTKMPKG*LQFPPV Trigger: TACTGGTGGAAATTGTAACCAGCCTTTGGGCATCTT...AGTTAACCATGGAGGGATAAAGTAATGTGAAAAGTGAGATGGCTGCAAAGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGACAAGCCAAGGTCTTTaGAGTGCTCCACTTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: YCFIKIKVFPERHLQLSMTSQGL*SAPLDS Trigger: AGAATCAAGTGGAGCACTTCAAAGACCTTGGCTTGT...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGTTGTGGTGGTGGGACTaGCTGAGGCAAAATATATAC | + |
|
Preference number: 4 (lower is better) Translates to: YCFIKIKVFPERHLQLSMLWWWD*LRQNIY Trigger: GTATATATTTTGCCTCAGTCAGTCCCACCACCACAA...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | GCAACAGATTTTCTCCCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCCATTCATTGCCCTACTaGAATTGGGAGTTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ATDFLPKSMDFIIIDSQTHSLPY*NWEFQG Trigger: TCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATG...GGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGGGAGAAAATCTGTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR GCA 90 bp | TCCATAAATCAGTTTCAGCCTAGCATGTCTTGTTTTGAAAGCAACATTGTTCCCCCCCCAAATACCAGTTaGAAAGTCCTTGAAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SINQFQPSMSCFESNIVPPPNTS*KVLENK Trigger: TTTGTTTTCAAGGACTTTGCAACTGGTATTTGGGGG...GGGAACAATGTTGCTTTCAAAACAAGACATGCTAGGCTGAAACTGATTTATGGA 39% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCACTAAAACGCCTGCTTTTCTTAACTCCACACCGAACCAACCTGAAATATTATTTTGGCCCAGAATaGCAACAAGAATTGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPLKRLLFLTPHRTNLKYYFGPE*QQELKK Trigger: TTTCTTCAATTCTTGTTGGCATTCTGGGCCAAAATA...ATATTTCAGGTTGGTTCGGTGTGGAGTTAAGAAAAGCAGGCGTTTTAGTGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CCA 90 bp | TCCATAAATCAGTTTCAGCCTAGCATGTCTTGTTTTGAAAGCAACATTGTTCCCGCACACTGGACAGTATaGGTCACTAGCAAAATTATT | + |
|
Preference number: 4 (lower is better) Translates to: SINQFQPSMSCFESNIVPAHWTV*VTSKII Trigger: AATAATTTTGCTAGTGACCCATACTGTCCAGTGTGC...GGGAACAATGTTGCTTTCAAAACAAGACATGCTAGGCTGAAACTGATTTATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCATGTCTACTGAATAAATaGCTCAGATGTTTTCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GKMVNSKFNNVTLTKCVACLLNK*LRCFRQ Trigger: CTGTCGAAAACATCTGAGTCATTTATTCAGTAGACA...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR GCA 90 bp | GCAACAGATTTTCTCCCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCAAGGAGAGCTATCTTTaGAGCCATCTCACTTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATDFLPKSMDFIIIDSQTKESYL*SHLTFH Trigger: GTGAAAAGTGAGATGGCTGCAAAGATAGCTCTCCTT...GGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGGGAGAAAATCTGTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR GCA 90 bp | CCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCTGCTATCTCTTCTTCGATATCCTTAGTGAATaGAGGTCACATGCAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKSMDFIIIDSQTCYLFFDILSE*RSHAKR Trigger: CCTCTTTGCATGTGACCTGCATTCACTAAGGATATC...GAAGAAGAGATAGCAGGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CCA 90 bp | CCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCTGCTATCTCTTCTTCAGCTGGCAAAGAACCTaGATCAAGGACATATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKSMDFIIIDSQTCYLFFSWQRT*IKDILS Trigger: AGACAATATGTCCTTGATCCAGGTTCTTTGCCAGCT...GAAGAAGAGATAGCAGGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR TCA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGGCTAACACCTGTCCTTaGAGAGAAGTGAAAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YCFIKIKVFPERHLQLSMANTCP*REVKEK Trigger: TTTTTCTTTCACTTCTCTTCAAGGACAGGTGTTAGC...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR GCA 90 bp | CCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCTGCTATCTCTTCTTCAGCCAGAAGCTTGCCTaGCATTTACAAAATACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKSMDFIIIDSQTCYLFFSQKLA*HLQNTD Trigger: ATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCT...GAAGAAGAGATAGCAGGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR GCA 90 bp | CCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCTGCTATCTCTTCTTCGCACACTTGAATTGTTaGGCTGATCAACACTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: PKSMDFIIIDSQTCYLFFAHLNC*ADQHYN Trigger: ATTGTAGTGTTGATCAGCGCAACAATTCAAGTGTGC...GAAGAAGAGATAGCAGGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| 3UTR CAA 72 bp | TTCTATAATCTGTATCCCCCTCAAGACCAAATATACTaGCTAACAAGCAGTCTTTTCCATAAATCAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FYNLYPPQDQIY*LTSSLFHKSVS Trigger: TGAAACTGATTTATGGAAAAGACTGCTTGTTAGCAAGTATATTTGGTCTTGAGGGGGATACAGATTATAGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGAACTAAGGGGGCTACTTaGACAACAGAGTTCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: GWLQGTLWAKELPQVFVGTKGAT*TTEFNS Trigger: ACTGTTGAACTCTGTTGTCAAAGTAGCCCCCTTAGT...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGATGTTACTTTGCACACTaGAATTGTTGCGCTGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: GWLQGTLWAKELPQVFVGCYFAH*NCCADQ Trigger: TTGATCAGCGCAACAATTCAAGTGTGCAAAGTAACA...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGAGGGAATGAAAATTACTaGTTGCAGTTAAGCAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: GWLQGTLWAKELPQVFVGGNENY*LQLSNS Trigger: GGAATTGCTTAACTGCAACAAGTAATTTTCATTCCC...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000395468.9 ENST00000622254.1 |
||
| CDS-3UTR CAA 90 bp | GGGTGGCTACAGGGAACGCTCTGGGCAAAAGAGCTGCCTCAGGTTTTTGTGGGACAAGACCAAATATACTaGCTAACAAGCAGTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GWLQGTLWAKELPQVFVGQDQIY*LTSSLF Trigger: GAAAAGACTGCTTGTTAGCAAGTATATTTGGTCTTG...TCCCACAAAAACCTGAGGCAGCTCTTTTGCCCAGAGCGTTCCCTGTAGCCACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CAA 90 bp | TCTCCACTAAAACGCCTGCTTTTCTTAACTCCACACCGAACCAACCTGAAATATACAATGGACACCATGTaGCTGAGAGGGTTTGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLKRLLFLTPHRTNLKYTMDTM*LRGFAE Trigger: CTCCGCAAACCCTCTCAGCAACATGGTGTCCATTGT...ATATTTCAGGTTGGTTCGGTGTGGAGTTAAGAAAAGCAGGCGTTTTAGTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCAAGGCAGAAGAATCGTTaGAACCTGGAGGCAGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GKMVNSKFNNVTLTKCVARQKNR*NLEAEV Trigger: AACCTCTGCCTCCAGGTTCAAACGATTCTTCTGCCT...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CAA 90 bp | ACTCAGATGTTTTCGACAGCCAGAAGCTTGCCTGCCATTTACAAAATACTGATTTCGACAGCCAGAAGCTaGCCTGCCATTTACAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: TQMFSTARSLPAIYKILISTARS*PAIYKI Trigger: TATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCGA...AATCAGTATTTTGTAAATGGCAGGCAAGCTTCTGGCTGTCGAAAACATCTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCAATTGCCCTACTGAAATaGGGAGTTCCAAGGAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: GKMVNSKFNNVTLTKCVAIALLK*GVPRNA Trigger: GGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAAT...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS GCA 90 bp | CCACCCCAAGATACAGAACATTTCTCACTCCAGAAAGTTTACTCATaGTCTTTTCCAATCAACTACCTTGCCTCATGGCAGTCAATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PPQDTEHFSLQKVYS*SFPINYLASWQSIF Trigger: AAAAATTGACTGCCATGAGGCAAGGTAGTTGATTGGAAAAGAGCATGAGTAAACTTTCTGGAGTGAGAAATGTTCTGTATCTTGGGGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556515.1 |
||
| CDS-3UTR CAA 90 bp | GGGAAAATGGTAAACTCCAAGTTTAATAATGTGACCCTCACTAAATGCGTAGCAAACCCAGGCACAGTCTaGACAAAAACTCTGAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GKMVNSKFNNVTLTKCVANPGTV*TKTLSR Trigger: TCTACTCAGAGTTTTTGTCAAGACTGTGCCTGGGTT...TGCTACGCATTTAGTGAGGGTCACATTATTAAACTTGGAGTTTACCATTTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CAA 90 bp | TTCATTCATTGCCCTACTGAAATTGGGAGTTCCAAGGAATGCCAGCGAAATCTCAGACATTGGCACTTATaGTTTAGAAGTGTAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FIHCPTEIGSSKECQRNLRHWHL*FRSVGN Trigger: ATTGCCTACACTTCTAAACAATAAGTGCCAATGTCT...GAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGGCAATGAATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CAA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGTTTGAAGTGCTCCACTaGATTCTTGAGAACCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YCFIKIKVFPERHLQLSMFEVLH*ILENRV Trigger: CACCCGGTTCTCAAGAATCAAGTGGAGCACTTCAAA...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CAA 90 bp | CTATCTTTGCAGCCATCTCACTTTTCACATTACTTTATCCCTCCATGGTTAACTCTAGCATGTCTTGTTTaGAAAGCAACATTGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLQPSHFSHYFIPPWLTLACLV*KATLFP Trigger: AGGGAACAATGTTGCTTTCAAAACAAGACATGCTAG...AGTTAACCATGGAGGGATAAAGTAATGTGAAAAGTGAGATGGCTGCAAAGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CAA 90 bp | CCAAAATCAATGGACTTCATAATTATAGATTCCCAAACCTGCTATCTCTTCTTCCCAGGCTTTCTAACCTaGGCATTTGATAAAGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PKSMDFIIIDSQTCYLFFPGFLT*AFDKAS Trigger: GCTAGCTTTATCAAATGCCAAGGTTAGAAAGCCTGG...GAAGAAGAGATAGCAGGTTTGGGAATCTATAATTATGAAGTCCATTGATTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS-3UTR CAA 90 bp | TATTGCTTTATTAAAATCAAAGTCTTCCCTGAACGCCACCTACAACTTTCTATGAGTAATAATCCCAAATaGTGTTCATGGCCCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: YCFIKIKVFPERHLQLSMSNNPK*CSWPFK Trigger: TTTGAAGGGCCATGAACACAATTTGGGATTATTACT...CATAGAAAGTTGTAGGTGGCGTTCAGGGAAGACTTTGATTTTAATAAAGCAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395468.9 |
||
| CDS TCA 72 bp | GAGGTCAAGAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCCGGCAATATCCGAGACCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: EVKRSRPSWLTR*NPVSGNIRDRS Trigger: ACTGCGGTCTCGGATATTGCCGGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCTTGACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556515.1 |
||
| CDS CCA 72 bp | AAGGCAGGCTCCTCAACTAAGATGTTAACCCCACACTaGGTTGTATGGGGGCCACCAGGCATTGGTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: KAGSSTKMLTPH*VVWGPPGIGGA Trigger: TGCTCCACCAATGCCTGGTGGCCCCCATACAACCCAGTGTGGGGTTAACATCTTAGTTGAGGAGCCTGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000553976.1 |
||