RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAPK14 (Homo sapiens)

Ensembl gene IDs: ENSG00000112062

Ensembl transcript IDs: ENST00000229794.9, ENST00000229795.7, ENST00000310795.8, ENST00000468133.5, ENST00000472333.1, ENST00000474429.5, ENST00000490379.1, ENST00000491957.5, ENST00000496250.5, ENST00000622903.4

Found 447 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCTGAAGCAACCAGAAGGTATGGGCCTTCTCTCCGTGCCACTGTaGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGTCACA +
Preference number: 1 (lower is better)
Translates to: GLKQPEGMGLLSVPL*DVVKSTPHRQGGVT
Trigger: TGTGACCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACAGTGGCACGGAGAGAAGGCCCATACCTTCTGGTTGCTTCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR CCA 90 bp CGTGCCACTGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTaGGGTCACAGGAGAAGCCAAAGTGGCAAAAGCATGACCGGGATT +
Preference number: 1 (lower is better)
Translates to: RATVGCCQVYAPPSR*GHRRSQSGKSMTGI
Trigger: AATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTGTGACCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACAGTGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR TCA 90 bp TGGTCCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGTCTaGAGCAACCAGAAGGTATGGGCCTTCTCTCCGTGCCACTGTGGG +
Preference number: 1 (lower is better)
Translates to: WSFLAVRITEGRCQV*SNQKVWAFSPCHCG
Trigger: CCCACAGTGGCACGGAGAGAAGGCCCATACCTTCTGGTTGCTTCAGACCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR GCA 90 bp CATATACGCATGTGCTCACATGCACACATGACCGCCTATGAAGGCTaGCTGATTACTCCGGGCCCACAAGCAGCTGTCCAACAGCCCTCT +
Preference number: 1 (lower is better)
Translates to: HIRMCSHAHMTAYEG*LITPGPQAAVQQPS
Trigger: AGAGGGCTGTTGGACAGCTGCTTGTGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCACATGCGTATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR TCA 90 bp CTAGTGCACAGAAGCCAGTTGGTCCTTTTTGGCTGTACGTATCACTaGGGGACGGTGTCAGGTCTGAAGCAACCAGAAGGTATGGGCCTT +
Preference number: 1 (lower is better)
Translates to: LVHRSQLVLFGCTYH*GTVSGLKQPEGMGL
Trigger: AAGGCCCATACCTTCTGGTTGCTTCAGACCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGGACCAACTGGCTTCTGTGCACTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR GCA 90 bp GTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACATaGACACACACTAACACGCACGCACACGCACGCACACCCCCTTCC +
Preference number: 1 (lower is better)
Translates to: VCSYCLTLPQRQTHT*THTNTHAHARTPPS
Trigger: GGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGCATGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
3UTR GCA 90 bp CTGACACCAGGGCCTCCTGAAGAGAGCAGGACAAGCAGCTGTGCATaGTCAAATAGCAAGACGTGCAAAACACATCCTCACTCTGCTAGA +
Preference number: 1 (lower is better)
Translates to: LTPGPPEESRTSSCA*SNSKTCKTHPHSAR
Trigger: TCTAGCAGAGTGAGGATGTGTTTTGCACGTCTTGCTATTTGAGCATGCACAGCTGCTTGTCCTGCTCTCTTCAGGAGGCCCTGGTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR GCA 90 bp GAGCTCTTCCAAGAGCTCCAGCTTAGAGTCCAGGCTTCCAGAGCATaGAGCCTCCTAACACGTATGTGGTCACATGTGCAAAGACCTTTA +
Preference number: 1 (lower is better)
Translates to: ELFQELQLRVQASRA*SLLTRMWSHVQRPL
Trigger: TAAAGGTCTTTGCACATGTGACCACATACGTGTTAGGAGGCTGCATGCTCTGGAAGCCTGGACTCTAAGCTGGAGCTCTTGGAAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR CCA 90 bp GAAACCAGGTGCTCAGGACTCCATCTCTTCTTGGTCAAGGGGTGGTaGCACAAAGCTGATGACTTCATCATAGGTCAGGCTTTTCCACTC +
Preference number: 1 (lower is better)
Translates to: ETRCSGLHLFLVKGW*HKADDFIIGQAFPL
Trigger: GAGTGGAAAAGCCTGACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310795.8
3UTR CCA 90 bp ACAGAAACCAGGTGCTCAGGACTCCATCTCTTCTTGGTCAAGGGGTaGTGGCACAAAGCTGATGACTTCATCATAGGTCAGGCTTTTCCA +
Preference number: 1 (lower is better)
Translates to: TETRCSGLHLFLVKG*WHKADDFIIGQAFP
Trigger: TGGAAAAGCCTGACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGGTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310795.8
3UTR TCA 90 bp GGGGTCCACCCTGTCCCTCTGGAGTACATGTATCACTGCACTGATTaGGAAATGGAAACACCTTGGCCCAAATACAAGATTCTGTCACAC +
Preference number: 1 (lower is better)
Translates to: GVHPVPLEYMYHCTD*EMETPWPKYKILSH
Trigger: GTGTGACAGAATCTTGTATTTGGGCCAAGGTGTTTCCATTTCTCAATCAGTGCAGTGATACATGTACTCCAGAGGGACAGGGTGGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR GCA 90 bp TTATTTTGTCAGGAAGATGATGAACGGTTCCAACTCACCTGCTTATaGTTGCCTCAAGCTACCCAGCCATCTTCCCAACTAGGCAAAGGG +
Preference number: 1 (lower is better)
Translates to: LFCQEDDERFQLTCL*LPQATQPSSQLGKG
Trigger: CCCTTTGCCTAGTTGGGAAGATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCGTTCATCATCTTCCTGACAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR GCA 90 bp ATCAGAACATCTGGGATCTATACTCAGCTCTGCCACGTGATTCAGTaGATGACATGGAAAAGTCACTGCCCTTCTGGGCTTTTGCTTCTT +
Preference number: 1 (lower is better)
Translates to: IRTSGIYTQLCHVIQ*MTWKSHCPSGLLLL
Trigger: AAGAAGCAAAAGCCCAGAAGGGCAGTGACTTTTCCATGTCATGCACTGAATCACGTGGCAGAGCTGAGTATAGATCCCAGATGTTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR CCA 90 bp ACCCTGTCCCTCTGGAGTACATGTATCACTGCACTGATTGAGAAATaGAAACACCTTGGCCCAAATACAAGATTCTGTCACACAGCCAAC +
Preference number: 1 (lower is better)
Translates to: TLSLWSTCITALIEK*KHLGPNTRFCHTAN
Trigger: GTTGGCTGTGTGACAGAATCTTGTATTTGGGCCAAGGTGTTTCCATTTCTCAATCAGTGCAGTGATACATGTACTCCAGAGGGACAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR CCA 90 bp CTTACAAACACACCCAGGTCAAAGTACAGATTGGTAGAAGGCAAGTaGCAGAGGCTCCCAACAGGGCAGATAATTACAAAGCATCAACTC +
Preference number: 1 (lower is better)
Translates to: LTNTPRSKYRLVEGK*QRLPTGQIITKHQL
Trigger: GAGTTGATGCTTTGTAATTATCTGCCCTGTTGGGAGCCTCTGCCACTTGCCTTCTACCAATCTGTACTTTGACCTGGGTGTGTTTGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR GCA 90 bp GAAGAGAGCAGGACAAGCAGCTGTGCATGCTCAAATAGCAAGACGTaGAAAACACATCCTCACTCTGCTAGAAATAAAGAGTACACAGGA +
Preference number: 1 (lower is better)
Translates to: EESRTSSCACSNSKT*KTHPHSARNKEYTG
Trigger: TCCTGTGTACTCTTTATTTCTAGCAGAGTGAGGATGTGTTTTGCACGTCTTGCTATTTGAGCATGCACAGCTGCTTGTCCTGCTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR GCA 90 bp TATTCTTTATTTTGTCAGGAAGATGATGAACGGTTCCAACTCACCTaGTTATGCTTGCCTCAAGCTACCCAGCCATCTTCCCAACTAGGC +
Preference number: 1 (lower is better)
Translates to: YSLFCQEDDERFQLT*LCLPQATQPSSQLG
Trigger: GCCTAGTTGGGAAGATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCGTTCATCATCTTCCTGACAAAATAAAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR GCA 90 bp AGTTTGGATCATGTTATCAGAACATCTGGGATCTATACTCAGCTCTaGCACGTGATTCAGTGCATGACATGGAAAAGTCACTGCCCTTCT +
Preference number: 1 (lower is better)
Translates to: SLDHVIRTSGIYTQL*HVIQCMTWKSHCPS
Trigger: AGAAGGGCAGTGACTTTTCCATGTCATGCACTGAATCACGTGGCAGAGCTGAGTATAGATCCCAGATGTTCTGATAACATGATCCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR TCA 90 bp ACACATCCTCACTCTGCTAGAAATAAAGAGTACACAGGAAGTACATaGCATCAAGAACCTGCTTCTGACTACTGGGGCAGATATTCAAGA +
Preference number: 1 (lower is better)
Translates to: THPHSARNKEYTGST*HQEPASDYWGRYSR
Trigger: TCTTGAATATCTGCCCCAGTAGTCAGAAGCAGGTTCTTGATGTCATGTACTTCCTGTGTACTCTTTATTTCTAGCAGAGTGAGGATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR TCA 90 bp CCTTGGCCCAAATACAAGATTCTGTCACACAGCCAACACTGGAAGTaGCTTTATACTTTCTTATTACACAAAAGGCTTAAATATATGAGT +
Preference number: 1 (lower is better)
Translates to: PWPKYKILSHSQHWK*LYTFLLHKRLKYMS
Trigger: ACTCATATATTTAAGCCTTTTGTGTAATAAGAAAGTATAAAGTCACTTCCAGTGTTGGCTGTGTGACAGAATCTTGTATTTGGGCCAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR GCA 90 bp CAGAAGCCAGTTGGTCCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGGAGCAAGGTGGAGGCTaGCCTGGAGCATCCACAACC +
Preference number: 2 (lower is better)
Translates to: QKPVGPFWLYVSLRDGVREQGGG*PGASTT
Trigger: GGTTGTGGATGCTCCAGGGCAGCCTCCACCTTGCTC...CCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGGACCAACTGGCTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR CAA 90 bp TTTTGTCAGGAAGATGATGAACGGTTCCAACTCACCTGCTTATGCTaGCCTCAAGCTACCCAGCCATCTTCCCAACTAGGCAAAGGGCCC +
Preference number: 2 (lower is better)
Translates to: FCQEDDERFQLTCLC*PQATQPSSQLGKGP
Trigger: GGGCCCTTTGCCTAGTTGGGAAGATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCGTTCATCATCTTCCTGACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR TCA 90 bp GGTGACATGGGATCTAAACTACCCAAGAAGTCTTCACTGGCAAACCTGCCTGACTTTGGAGAGTTCCCGTaGAAAGGCCTTCCCCTCACA +
Preference number: 2 (lower is better)
Translates to: GDMGSKLPKKSSLANLPDFGEFP*KGLPLT
Trigger: TGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAA...GTCAGGCAGGTTTGCCAGTGAAGACTTCTTGGGTAGTTTAGATCCCATGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CCA 90 bp AGTCAGCACACAAAGGGCATGTGTGCTTACAAACACACCCAGGTCAAAGTACAGTTGGTAGAAGGCAAGTaGCAGAGGCTCCCAACAGGG +
Preference number: 2 (lower is better)
Translates to: SQHTKGMCAYKHTQVKVQLVEGK*QRLPTG
Trigger: CCCTGTTGGGAGCCTCTGCCACTTGCCTTCTACCAA...CTGTACTTTGACCTGGGTGTGTTTGTAAGCACACATGCCCTTTGTGTGCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR CAA 90 bp GGGATCAACAGAACAGAAACCAGGTGCTCAGGACTCCATCTCTTCTaGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATAGGT +
Preference number: 2 (lower is better)
Translates to: GINRTETRCSGLHLF*VKGWWHKADDFIIG
Trigger: ACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGGTTTCTGTTCTGTTGATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
3UTR CAA 90 bp GCTCCCGTGATCTTAGTGTGTACCCAGATAGAGAATAAAACACACTaGTGCATGCAAGCAGGCACACATGCGTGCACGCACACACACACT +
Preference number: 2 (lower is better)
Translates to: APVILVCTQIENKTH*CMQAGTHACTHTHT
Trigger: AGTGTGTGTGTGCGTGCACGCATGTGTGCCTGCTTGCATGCACAAGTGTGTTTTATTCTCTATCTGGGTACACACTAAGATCACGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR TCA 90 bp CCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGTCTGAAGCAACCAGAAAAGTGGCAAAAGCATaGCCGGGATTGGGGACAATT +
Preference number: 2 (lower is better)
Translates to: PFWLYVSLRDGVRSEATRKVAKA*PGLGTI
Trigger: AATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTT...TCTGGTTGCTTCAGACCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR TCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGGGGGAGAGTCCCGGGTaGGAGGGAATCGCCATCAGT +
Preference number: 2 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVGESPG*EGIAIS
Trigger: ACTGATGGCGATTCCCTCTCACCCGGGACTCTCCCC...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CCA 90 bp GGTGACATGGGATCTAAACTACCCAAGAAGTCTTCACTGGCAAACCTGCCTGACCAGGAGAAGCCAAAGTaGCAAAAGCATGACCGGGAT +
Preference number: 2 (lower is better)
Translates to: GDMGSKLPKKSSLANLPDQEKPK*QKHDRD
Trigger: ATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTG...GTCAGGCAGGTTTGCCAGTGAAGACTTCTTGGGTAGTTTAGATCCCATGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CCA 90 bp GTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAACAGAAATTCTTGGTCAAGGGGTaGTGGCACAAAGCTGATGAC +
Preference number: 2 (lower is better)
Translates to: VPVKRPSPHSEVGSTEQKFLVKG*WHKADD
Trigger: GTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAA...TTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310795.8
3UTR CAA 90 bp CAAAGGGCATGTGTGCTTACAAACACACCCAGGTCAAAGTACAGATaGGTAGAAGGCAAGTGGCAGAGGCTCCCAACAGGGCAGATAATT +
Preference number: 2 (lower is better)
Translates to: QRACVLTNTPRSKYR*VEGKWQRLPTGQII
Trigger: AATTATCTGCCCTGTTGGGAGCCTCTGCCACTTGCCTTCTACCAATCTGTACTTTGACCTGGGTGTGTTTGTAAGCACACATGCCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR GCA 90 bp AGGCAAAGGGCCCCTTCAGTCATAAATGTTGGGAGGAGAATCCAGGAAGGCATAAAACACACTTGTGCATaGAAGCAGGCACACATGCGT +
Preference number: 2 (lower is better)
Translates to: RQRAPSVINVGRRIQEGIKHTCA*KQAHMR
Trigger: ACGCATGTGTGCCTGCTTGCATGCACAAGTGTGTTT...TATGCCTTCCTGGATTCTCCTCCCAACATTTATGACTGAAGGGGCCCTTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR GCA 90 bp AGGCAAAGGGCCCCTTCAGTCATAAATGTTGGGAGGAGAATCCAGGAAGGCATATTTCTTTTGTTCAACTaGCTGGCAGCAGATCGAGGG +
Preference number: 2 (lower is better)
Translates to: RQRAPSVINVGRRIQEGIFLLFN*LAADRG
Trigger: CCCTCGATCTGCTGCCAGGCAGTTGAACAAAAGAAA...TATGCCTTCCTGGATTCTCCTCCCAACATTTATGACTGAAGGGGCCCTTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR CCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGGCCCCACCGTCAAGGTaGGGTCACAGGAGAAGCCAA +
Preference number: 2 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVAPPSR*GHRRSQ
Trigger: TTGGCTTCTCCTGTGACCCCACCTTGACGGTGGGGC...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR TCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGCCTATGAAGGCTGCCTaGTTACTCCGGGCCCACAAG +
Preference number: 2 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVPMKAA*LLRAHK
Trigger: CTTGTGGGCCCGGAGTAATCAGGCAGCCTTCATAGG...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR TCA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTGGGGAGAGTCCCGGGTaGGAGGGAATCGCCATCAGT +
Preference number: 2 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPGESPG*EGIAIS
Trigger: ACTGATGGCGATTCCCTCTCACCCGGGACTCTCCCC...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR TCA 90 bp GTGCACGCACACACACACTCACACTGTCTTATACCTCACTCATCCGGGAAGTCACATTATGCATCCCACTaGCCAAATATCAACTGTCTG +
Preference number: 2 (lower is better)
Translates to: VHAHTHSHCLIPHSSGKSHYASH*PNINCL
Trigger: CAGACAGTTGATATTTGGTCAGTGGGATGCATAATG...TGACTTCCCGGATGAGTGAGGTATAAGACAGTGTGAGTGTGTGTGTGCGTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR CCA 90 bp AGGCAAAGGGCCCCTTCAGTCATAAATGTTGGGAGGAGAATCCAGGAAGGCATAGGGAAAAAGAAAAGCTaGGCTTTCATGGCTTCTCTC +
Preference number: 2 (lower is better)
Translates to: RQRAPSVINVGRRIQEGIGKKKS*AFMASL
Trigger: GAGAGAAGCCATGAAAGCCCAGCTTTTCTTTTTCCC...TATGCCTTCCTGGATTCTCCTCCCAACATTTATGACTGAAGGGGCCCTTTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR GCA 90 bp CTGGGATACTATTGTCTAATGGAGGCTCCCGTGATCTTAGTGTGTACCCAGATACACAAAGGGCATGTGTaGTTACAAACACACCCAGGT +
Preference number: 2 (lower is better)
Translates to: LGYYCLMEAPVILVCTQIHKGHV*LQTHPG
Trigger: ACCTGGGTGTGTTTGTAAGCACACATGCCCTTTGTG...TATCTGGGTACACACTAAGATCACGGGAGCCTCCATTAGACAATAGTATCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR GCA 90 bp AGGCAAAGGGCCCCTTCAGTCATAAATGTTGGGAGGAGAATCCAGGAAGGCATATTCTGTCTAAGTCCCTaGTTAGAAGCAAGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: RQRAPSVINVGRRIQEGIFCLSP*LEARKH
Trigger: GTGCTTTCTTGCTTCTAAGCAGGGACTTAGACAGAA...TATGCCTTCCTGGATTCTCCTCCCAACATTTATGACTGAAGGGGCCCTTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR CCA 90 bp ACACGTATGTGGTCACATGTGCAAAGACCTTTATTACAAAATATTCAGAGCAGTAGGTGGAGGCTGCCCTaGAGCATCCACAACCTCCTG +
Preference number: 2 (lower is better)
Translates to: TRMWSHVQRPLLQNIQSSRWRLP*SIHNLL
Trigger: CAGGAGGTTGTGGATGCTCCAGGGCAGCCTCCACCT...ACTGCTCTGAATATTTTGTAATAAAGGTCTTTGCACATGTGACCACATACGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR TCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGGCCTTCCCCTCACAGTaGAGTGGGATCAACAGAACA +
Preference number: 2 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVAFPSQ*SGINRT
Trigger: TGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGC...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR TCA 90 bp CACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACAGCCTTCCCCTCACAGTaGAGTGGGATCAACAGAACA +
Preference number: 2 (lower is better)
Translates to: HCDHSLFILSYPPTKTDTAFPSQ*SGINRT
Trigger: TGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGC...TGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
3UTR-3UTR GCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGGAATCGCCATCAGTCTaGCTCCTTCCTTCTTGCTCC +
Preference number: 2 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVESPSV*LLPSCS
Trigger: GGAGCAAGAAGGAAGGAGGCAGACTGATGGCGATTC...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CCA 90 bp CATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCTATACTCAGCGTGGGGTCTAGGGACTaGGTAGAAAGGTCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: HGIIVWIMLSEHLGSILSVGSRD*VERSLC
Trigger: ACAGAGGGACCTTTCTACCCAGTCCCTAGACCCCAC...GCTGAGTATAGATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR TCA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCAGCTCACATGCACACATaGCCGCCTATGAAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTAAHMHT*PPMKAA
Trigger: GGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGC...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CCA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTGAAAGAAGAGCAAGGTaGAGGCTGCCCTGGAGCATC +
Preference number: 2 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPERRAR*RLPWSI
Trigger: GATGCTCCAGGGCAGCCTCCACCTTGCTCTTCTTTC...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR TCA 90 bp AGACTCACATTCCCATGGCTTCTGTCTAAGTCCCTGCTTAGAAGCAAGAAAGCATCAACTCACAGACTCTaGGGAGATTTTCTTCAAAAG +
Preference number: 2 (lower is better)
Translates to: RLTFPWLLSKSLLRSKKASTHRL*GDFLQK
Trigger: CTTTTGAAGAAAATCTCCTCAGAGTCTGTGAGTTGA...TGCTTTCTTGCTTCTAAGCAGGGACTTAGACAGAAGCCATGGGAATGTGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR TCA 90 bp ACAGCCAGGGGATTGGCACCAATAAATACATTCGCAAAGTTCATCTTCGGCATCGTTTCTTGCAGACTCTaGGGAGATTTTCTTCAAAAG +
Preference number: 2 (lower is better)
Translates to: TARGLAPINTFAKFIFGIVSCRL*GDFLQK
Trigger: CTTTTGAAGAAAATCTCCTCAGAGTCTGCAAGAAAC...GATGCCGAAGATGAACTTTGCGAATGTATTTATTGGTGCCAATCCCCTGGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474429.5
3UTR-3UTR GCA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTGAATCGCCATCAGTCTaGCTCCTTCCTTCTTGCTCC +
Preference number: 2 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPESPSV*LLPSCS
Trigger: GGAGCAAGAAGGAAGGAGGCAGACTGATGGCGATTC...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR GCA 90 bp TCATCTTCGGCATCTGAGTCAAAGACTGAATATAGTTTCTTGCAGACTCTGAGGACAGCTCGGCCATTATaGATCCCACTGACCAAATAT +
Preference number: 2 (lower is better)
Translates to: SSSASESKTEYSFLQTLRTARPL*IPLTKY
Trigger: ATATTTGGTCAGTGGGATGCATAATGGCCGAGCTGT...CCTCAGAGTCTGCAAGAAACTATATTCAGTCTTTGACTCAGATGCCGAAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474429.5
3UTR-3UTR GCA 90 bp CTGGGTAGAAAGGTCCCTCTGTTGGGAACAAACATTTTACATAGGATATGTGAGACAGCTCGGCCATTATaGATCCCACTGACCAAATAT +
Preference number: 2 (lower is better)
Translates to: LGRKVPLLGTNILHRICETARPL*IPLTKY
Trigger: ATATTTGGTCAGTGGGATGCATAATGGCCGAGCTGT...CTCACATATCCTATGTAAAATGTTTGTTCCCAACAGAGGGACCTTTCTACCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR CCA 90 bp ACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACCCCCTCACAGTGAAGTaGGATCAACAGAACAGAAAC +
Preference number: 2 (lower is better)
Translates to: TVIIVCSYCLTLPQRQTHPLTVK*DQQNRN
Trigger: GTTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGG...GTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
3UTR-3UTR CCA 90 bp ACACGTATGTGGTCACATGTGCAAAGACCTTTATTACAAAATATTCAGAGCAGTCTCTCCGTGCCACTGTaGGATGTTGTCAAGTCTACG +
Preference number: 2 (lower is better)
Translates to: TRMWSHVQRPLLQNIQSSLSVPL*DVVKST
Trigger: CGTAGACTTGACAACATCCCACAGTGGCACGGAGAG...ACTGCTCTGAATATTTTGTAATAAAGGTCTTTGCACATGTGACCACATACGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CCA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTCTCTCCGTGCCACTGTaGGATGTTGTCAAGTCTACG +
Preference number: 2 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPLSVPL*DVVKST
Trigger: CGTAGACTTGACAACATCCCACAGTGGCACGGAGAG...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR TCA 90 bp TCATCTTCGGCATCTGAGTCAAAGACTGAATATAGTTTCTTGCAGACTCTGAGGCATTATGCATCCCACTaGCCAAATATCAACTGTCTG +
Preference number: 2 (lower is better)
Translates to: SSSASESKTEYSFLQTLRHYASH*PNINCL
Trigger: CAGACAGTTGATATTTGGTCAGTGGGATGCATAATG...CCTCAGAGTCTGCAAGAAACTATATTCAGTCTTTGACTCAGATGCCGAAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474429.5
3UTR-3UTR GCA 90 bp CACAGAGAGACCTCCATTATTAGGCTGTGCACTCATTGTTTCTTTCTTAAAAATCGGTTCCAACTCACCTaGTTATGCTTGCCTCAAGCT +
Preference number: 2 (lower is better)
Translates to: HRETSIIRLCTHCFFLKNRFQLT*LCLPQA
Trigger: AGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCG...ATTTTTAAGAAAGAAACAATGAGTGCACAGCCTAATAATGGAGGTCTCTCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR CCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGTCAGCTGAGGTGACATaGGATCTAAACTACCCAAGA +
Preference number: 2 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVSAEVT*DLNYPR
Trigger: TCTTGGGTAGTTTAGATCCCATGTCACCTCAGCTGA...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CCA 90 bp GGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCTATACTCAGCTCTAGACTCACATTCCCATaGCTTCTGTCTAAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: GIIVWIMLSEHLGSILSSRLTFP*LLSKSL
Trigger: CAGGGACTTAGACAGAAGCCATGGGAATGTGAGTCT...AGAGCTGAGTATAGATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR CCA 90 bp TGTGTAATCACATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCAAAGCTGGGCTTTCATaGCTTCTCTCATGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: CVITWDYSLDHVIRTSGIKAGLS*LLSCLW
Trigger: CCAGAGGCATGAGAGAAGCCATGAAAGCCCAGCTTT...GATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATGTGATTACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR TCA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCACAGCTCTTGTCTGCCTaGGCCAACTCTCAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTAQLLSA*ANSQKE
Trigger: TTCTTTCTGAGAGTTGGCTCAGGCAGACAAGAGCTG...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR TCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGTGCCATAATATCAGCTaGGGTGACATGGGATCTAAA +
Preference number: 2 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVCHNIS*GDMGSK
Trigger: TTTAGATCCCATGTCACCTCAGCTGATATTATGGCA...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR GCA 90 bp GCATCTGAGTCAAAGACTGAATATAGTTTCTTGCAGACTCTGAGGAGATTTTCTATTTCATCATCTGTGTaGCGAGCCAGTCCAAAATCC +
Preference number: 2 (lower is better)
Translates to: ASESKTEYSFLQTLRRFSISSSV*RASPKS
Trigger: GGATTTTGGACTGGCTCGGCACACAGATGATGAAAT...AGAAAATCTCCTCAGAGTCTGCAAGAAACTATATTCAGTCTTTGACTCAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474429.5
3UTR-3UTR GCA 90 bp TGTGTAATCACATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCTCATGGCTTCTCTCATaGCTCTGGCCCAAGAAAATG +
Preference number: 2 (lower is better)
Translates to: CVITWDYSLDHVIRTSGISWLLS*LWPKKM
Trigger: CATTTTCTTGGGCCAGAGGCATGAGAGAAGCCATGA...GATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATGTGATTACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR CCA 90 bp ACACGTATGTGGTCACATGTGCAAAGACCTTTATTACAAAATATTCAGAGCAGTCCAGTTGGTCCTTTTTaGCTGTACGTATCACTGAGG +
Preference number: 2 (lower is better)
Translates to: TRMWSHVQRPLLQNIQSSPVGPF*LYVSLR
Trigger: CCTCAGTGATACGTACAGCCAAAAAGGACCAACTGG...ACTGCTCTGAATATTTTGTAATAAAGGTCTTTGCACATGTGACCACATACGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CCA 90 bp CACAGAGAGACCTCCATTATTAGGCTGTGCACTCATTGTTTCTTTCTTAAAAATCTTCTCTCATGCCTCTaGCCCAAGAAAATGACCAAG +
Preference number: 2 (lower is better)
Translates to: HRETSIIRLCTHCFFLKNLLSCL*PKKMTK
Trigger: CTTGGTCATTTTCTTGGGCCAGAGGCATGAGAGAAG...ATTTTTAAGAAAGAAACAATGAGTGCACAGCCTAATAATGGAGGTCTCTCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR CCA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCACCCCTCACAGTGAAGTaGGATCAACAGAACAGAAAC +
Preference number: 2 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTAPLTVK*DQQNRN
Trigger: GTTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGG...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CCA 90 bp ACACGTATGTGGTCACATGTGCAAAGACCTTTATTACAAAATATTCAGAGCAGTCCTGCTTCTGACTACTaGGGCAGATATTCAAGAAAC +
Preference number: 2 (lower is better)
Translates to: TRMWSHVQRPLLQNIQSSPASDY*GRYSRN
Trigger: GTTTCTTGAATATCTGCCCCAGTAGTCAGAAGCAGG...ACTGCTCTGAATATTTTGTAATAAAGGTCTTTGCACATGTGACCACATACGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR TCA 90 bp ACACGTATGTGGTCACATGTGCAAAGACCTTTATTACAAAATATTCAGAGCAGTTGGATGGTGAGGATTTaGACTGCAATAAAGGAGATG +
Preference number: 2 (lower is better)
Translates to: TRMWSHVQRPLLQNIQSSWMVRI*TAIKEM
Trigger: CATCTCCTTTATTGCAGTTCAAATCCTCACCATCCA...ACTGCTCTGAATATTTTGTAATAAAGGTCTTTGCACATGTGACCACATACGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR TCA 90 bp TACATTCGCAAAGTTCATCTTCGGCATCTGAGTCAAAGACTGAATATAGTTTCTGGTTTTAGGTCCCTGTaGATTATGTCAGCTGAATGT +
Preference number: 2 (lower is better)
Translates to: YIRKVHLRHLSQRLNIVSGFRSL*IMSAEC
Trigger: ACATTCAGCTGACATAATTCACAGGGACCTAAAACC...AGAAACTATATTCAGTCTTTGACTCAGATGCCGAAGATGAACTTTGCGAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474429.5
3UTR-3UTR TCA 90 bp GCATCTGAGTCAAAGACTGAATATAGTTTCTTGCAGACTCTGAGGAGATTTTCTAAAATGAGCTTCAACTaGTCAATATGGTCTGTACCA +
Preference number: 2 (lower is better)
Translates to: ASESKTEYSFLQTLRRFSKMSFN*SIWSVP
Trigger: TGGTACAGACCATATTGATCAGTTGAAGCTCATTTT...AGAAAATCTCCTCAGAGTCTGCAAGAAACTATATTCAGTCTTTGACTCAGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474429.5
3UTR-3UTR TCA 90 bp TGTGTAATCACATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCAAACTAAATACATGGTaGAGCTCATGCTCTGAGAAC +
Preference number: 2 (lower is better)
Translates to: CVITWDYSLDHVIRTSGIKLNTW*SSCSEN
Trigger: GTTCTCAGAGCATGAGCTTCACCATGTATTTAGTTT...GATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATGTGATTACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR GCA 90 bp CACAGAGAGACCTCCATTATTAGGCTGTGCACTCATTGTTTCTTTCTTAAAAATGAAGGGGCAACAGTGTaGAGACAATGTACATTTTAT +
Preference number: 2 (lower is better)
Translates to: HRETSIIRLCTHCFFLKNEGATV*RQCTFY
Trigger: ATAAAATGTACATTGTCTGCACACTGTTGCCCCTTC...ATTTTTAAGAAAGAAACAATGAGTGCACAGCCTAATAATGGAGGTCTCTCTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR GCA 90 bp CATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCTATACTCAGCGCCCTTCTGGGCTTTTaGTTCTTTATCTTAAATAAG +
Preference number: 2 (lower is better)
Translates to: HGIIVWIMLSEHLGSILSALLGF*FFILNK
Trigger: CTTATTTAAGATAAAGAAGCAAAAGCCCAGAAGGGC...GCTGAGTATAGATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR TCA 90 bp TGTGTAATCACATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCAAAATGAGCTTCAACTaGTCAATATGGTCTGTACCA +
Preference number: 2 (lower is better)
Translates to: CVITWDYSLDHVIRTSGIKMSFN*SIWSVP
Trigger: TGGTACAGACCATATTGATCAGTTGAAGCTCATTTT...GATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATGTGATTACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR GCA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCACAGAACTTCAGCAGCTaGAGTCTTTTAACTATCTAC +
Preference number: 2 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTAQNFSS*SLLTIY
Trigger: GTAGATAGTTAAAAGACTGCAGCTGCTGAAGTTCTG...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR CAA 90 bp TTTGAGTTAAGTTCTGTATTCTGGTACTCAATTTCAGTAGAGCTGTaGAAATGTATAATGTGCCTCATTTCACAGAGAGACCTCCATTAT +
Preference number: 2 (lower is better)
Translates to: FELSSVFWYSISVEL*KCIMCLISQRDLHY
Trigger: ATAATGGAGGTCTCTCTGTGAAATGAGGCACATTATACATTTCAACAGCTCTACTGAAATTGAGTACCAGAATACAGAACTTAACTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR CAA 90 bp TGCTCACATGCACACATGACCGCCTATGAAGGCTGCCTGATTACTCCGGGCCCATGCCACTGTGGGATGTaGTCAAGTCTACGCCCCACC +
Preference number: 3 (lower is better)
Translates to: CSHAHMTAYEGCLITPGPCHCGM*SSLRPT
Trigger: GGTGGGGCGTAGACTTGACAACATCCCACAGTGGCA...TGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR CCA 72 bp CAACCAGAAGGTATGGGCCTTCTCTCCGTGCCACTGTaGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGT +
Preference number: 3 (lower is better)
Translates to: QPEGMGLLSVPL*DVVKSTPHRQG
Trigger: ACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACAGTGGCACGGAGAGAAGGCCCATACCTTCTGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR CCA 72 bp TTAGCAGGCTACACCAAACAGGTGGTGGGCCAGATTTaGCCCTCAGGCCACAGTCTGCTGAGCCCTGTCATT +
Preference number: 3 (lower is better)
Translates to: LAGYTKQVVGQI*PSGHSLLSPVI
Trigger: AATGACAGGGCTCAGCAGACTGTGGCCTGAGGGCCAAATCTGGCCCACCACCTGTTTGGTGTAGCCTGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR TCA 72 bp TTGGCTGTACGTATCACTGAGGGACGGTGTCAGGTCTaGAGCAACCAGAAGGTATGGGCCTTCTCTCCGTGC +
Preference number: 3 (lower is better)
Translates to: LAVRITEGRCQV*SNQKVWAFSPC
Trigger: GCACGGAGAGAAGGCCCATACCTTCTGGTTGCTTCAGACCTGACACCGTCCCTCAGTGATACGTACAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR TCA 72 bp TATACGCATGTGCTCACATGCACACATGACCGCCTATaGAGGCTGCCTGATTACTCCGGGCCCACAAGCAGC +
Preference number: 3 (lower is better)
Translates to: YTHVLTCTHDRL*RLPDYSGPTSS
Trigger: GCTGCTTGTGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCACATGCGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR GCA 72 bp ATGTGCTCACATGCACACATGACCGCCTATGAAGGCTaGCTGATTACTCCGGGCCCACAAGCAGCTGTCCAA +
Preference number: 3 (lower is better)
Translates to: MCSHAHMTAYEG*LITPGPQAAVQ
Trigger: TTGGACAGCTGCTTGTGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR CCA 72 bp GTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTaGGGTCACAGGAGAAGCCAAAGTGGCAAAAGCATG +
Preference number: 3 (lower is better)
Translates to: VGCCQVYAPPSR*GHRRSQSGKSM
Trigger: CATGCTTTTGCCACTTTGGCTTCTCCTGTGACCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR GCA 72 bp GGGCCTCCTGAAGAGAGCAGGACAAGCAGCTGTGCATaGTCAAATAGCAAGACGTGCAAAACACATCCTCAC +
Preference number: 3 (lower is better)
Translates to: GPPEESRTSSCA*SNSKTCKTHPH
Trigger: GTGAGGATGTGTTTTGCACGTCTTGCTATTTGAGCATGCACAGCTGCTTGTCCTGCTCTCTTCAGGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR GCA 72 bp CAAGAGCTCCAGCTTAGAGTCCAGGCTTCCAGAGCATaGAGCCTCCTAACACGTATGTGGTCACATGTGCAA +
Preference number: 3 (lower is better)
Translates to: QELQLRVQASRA*SLLTRMWSHVQ
Trigger: TTGCACATGTGACCACATACGTGTTAGGAGGCTGCATGCTCTGGAAGCCTGGACTCTAAGCTGGAGCTCTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR CCA 72 bp TCACAGGCTAGTGCACAGAAGCCAGTTGGTCCTTTTTaGCTGTACGTATCACTGAGGGACGGTGTCAGGTCT +
Preference number: 3 (lower is better)
Translates to: SQASAQKPVGPF*LYVSLRDGVRS
Trigger: AGACCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGGACCAACTGGCTTCTGTGCACTAGCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR CCA 72 bp AACTGCCTGGCAGCAGATCGAGGGAAAAAGAAAAGCTaGGCTTTCATGGCTTCTCTCATGCCTCTGGCCCAA +
Preference number: 3 (lower is better)
Translates to: NCLAADRGKKKS*AFMASLMPLAQ
Trigger: TTGGGCCAGAGGCATGAGAGAAGCCATGAAAGCCCAGCTTTTCTTTTTCCCTCGATCTGCTGCCAGGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR TCA 72 bp AGAAGCCAGTTGGTCCTTTTTGGCTGTACGTATCACTaGGGGACGGTGTCAGGTCTGAAGCAACCAGAAGGT +
Preference number: 3 (lower is better)
Translates to: RSQLVLFGCTYH*GTVSGLKQPEG
Trigger: ACCTTCTGGTTGCTTCAGACCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGGACCAACTGGCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR CCA 72 bp TGCTCAGGACTCCATCTCTTCTTGGTCAAGGGGTGGTaGCACAAAGCTGATGACTTCATCATAGGTCAGGCT +
Preference number: 3 (lower is better)
Translates to: CSGLHLFLVKGW*HKADDFIIGQA
Trigger: AGCCTGACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
3UTR CCA 72 bp GAACAGAAACCAGGTGCTCAGGACTCCATCTCTTCTTaGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCA +
Preference number: 3 (lower is better)
Translates to: EQKPGAQDSISS*SRGGGTKLMTS
Trigger: TGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGGTTTCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
3UTR-3UTR CAA 90 bp TGCTCACATGCACACATGACCGCCTATGAAGGCTGCCTGATTACTCCGGGCCCACATAGTTTGTTCATATaGTCTTACCCTCCCACAAAG +
Preference number: 3 (lower is better)
Translates to: CSHAHMTAYEGCLITPGPHSLFI*SYPPTK
Trigger: CTTTGTGGGAGGGTAAGACAATATGAACAAACTATG...TGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR GCA 72 bp CAGGAAGATGATGAACGGTTCCAACTCACCTGCTTATaGTTGCCTCAAGCTACCCAGCCATCTTCCCAACTA +
Preference number: 3 (lower is better)
Translates to: QEDDERFQLTCL*LPQATQPSSQL
Trigger: TAGTTGGGAAGATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCGTTCATCATCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR TCA 72 bp ATGTGCAAGGGCTTGGGCCGCTGTAATTCTCTTATCTaGGTCCAATACAAGCATCTTCTCCAGCAAGTCGAC +
Preference number: 3 (lower is better)
Translates to: MCKGLGRCNSLI*VQYKHLLQQVD
Trigger: GTCGACTTGCTGGAGAAGATGCTTGTATTGGACTCAGATAAGAGAATTACAGCGGCCCAAGCCCTTGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474429.5
3UTR GCA 72 bp TTTTGTCAGGAAGATGATGAACGGTTCCAACTCACCTaGTTATGCTTGCCTCAAGCTACCCAGCCATCTTCC +
Preference number: 3 (lower is better)
Translates to: FCQEDDERFQLT*LCLPQATQPSS
Trigger: GGAAGATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCGTTCATCATCTTCCTGACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR CCA 72 bp ACACCCAGGTCAAAGTACAGATTGGTAGAAGGCAAGTaGCAGAGGCTCCCAACAGGGCAGATAATTACAAAG +
Preference number: 3 (lower is better)
Translates to: TPRSKYRLVEGK*QRLPTGQIITK
Trigger: CTTTGTAATTATCTGCCCTGTTGGGAGCCTCTGCCACTTGCCTTCTACCAATCTGTACTTTGACCTGGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR CAA 90 bp CCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGTCTGAAGCAACCAGACATAGTTTGTTCATATaGTCTTACCCTCCCACAAAG +
Preference number: 3 (lower is better)
Translates to: PFWLYVSLRDGVRSEATRHSLFI*SYPPTK
Trigger: CTTTGTGGGAGGGTAAGACAATATGAACAAACTATG...TCTGGTTGCTTCAGACCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CAA 90 bp ACACGTATGTGGTCACATGTGCAAAGACCTTTATTACAAAATATTCAGAGCAGTTCCTTCTTGCTCCAGTaGACTCAGGGGGTCCACCCT +
Preference number: 3 (lower is better)
Translates to: TRMWSHVQRPLLQNIQSSSFLLQ*TQGVHP
Trigger: AGGGTGGACCCCCTGAGTCAACTGGAGCAAGAAGGA...ACTGCTCTGAATATTTTGTAATAAAGGTCTTTGCACATGTGACCACATACGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CAA 90 bp CTAATGGAGGCTCCCGTGATCTTAGTGTGTACCCAGATAGAGAATAAAACACACAGGTCAAAGTACAGATaGGTAGAAGGCAAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: LMEAPVILVCTQIENKTHRSKYR*VEGKWQ
Trigger: CTGCCACTTGCCTTCTACCAATCTGTACTTTGACCT...GTGTGTTTTATTCTCTATCTGGGTACACACTAAGATCACGGGAGCCTCCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR CCA 72 bp GTGGGGTCTAGGGACTGGGTAGAAAGGTCCCTCTGTTaGGAACAAACATTTTACATAGGATATGTGAGTATC +
Preference number: 3 (lower is better)
Translates to: VGSRDWVERSLC*EQTFYIGYVSI
Trigger: GATACTCACATATCCTATGTAAAATGTTTGTTCCCAACAGAGGGACCTTTCTACCCAGTCCCTAGACCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR TCA 72 bp CACTCTGCTAGAAATAAAGAGTACACAGGAAGTACATaGCATCAAGAACCTGCTTCTGACTACTGGGGCAGA +
Preference number: 3 (lower is better)
Translates to: HSARNKEYTGST*HQEPASDYWGR
Trigger: TCTGCCCCAGTAGTCAGAAGCAGGTTCTTGATGTCATGTACTTCCTGTGTACTCTTTATTTCTAGCAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR TCA 72 bp CCTGTCCCTCTGGAGTACATGTATCACTGCACTGATTaGGAAATGGAAACACCTTGGCCCAAATACAAGATT +
Preference number: 3 (lower is better)
Translates to: PVPLEYMYHCTD*EMETPWPKYKI
Trigger: AATCTTGTATTTGGGCCAAGGTGTTTCCATTTCTCAATCAGTGCAGTGATACATGTACTCCAGAGGGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR GCA 72 bp AGGACAAGCAGCTGTGCATGCTCAAATAGCAAGACGTaGAAAACACATCCTCACTCTGCTAGAAATAAAGAG +
Preference number: 3 (lower is better)
Translates to: RTSSCACSNSKT*KTHPHSARNKE
Trigger: CTCTTTATTTCTAGCAGAGTGAGGATGTGTTTTGCACGTCTTGCTATTTGAGCATGCACAGCTGCTTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR GCA 72 bp ATAAGACAGGCCCCAATGCTTAATACTTCGTTCATTTaGTCTTTGCTTTACCCATCCACAGCAAAGACCTGG +
Preference number: 3 (lower is better)
Translates to: IRQAPMLNTSFI*SLLYPSTAKTW
Trigger: CCAGGTCTTTGCTGTGGATGGGTAAAGCAAAGAGCAAATGAACGAAGTATTAAGCATTGGGGCCTGTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CAA 90 bp AGACTCACATTCCCATGGCTTCTGTCTAAGTCCCTGCTTAGAAGCAAGAAAGCAAGAAAGGTCCCTCTGTaGGGAACAAACATTTTACAT +
Preference number: 3 (lower is better)
Translates to: RLTFPWLLSKSLLRSKKARKVPL*GTNILH
Trigger: ATGTAAAATGTTTGTTCCCAACAGAGGGACCTTTCT...TGCTTTCTTGCTTCTAAGCAGGGACTTAGACAGAAGCCATGGGAATGTGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR CCA 72 bp CTCTGGAGTACATGTATCACTGCACTGATTGAGAAATaGAAACACCTTGGCCCAAATACAAGATTCTGTCAC +
Preference number: 3 (lower is better)
Translates to: LWSTCITALIEK*KHLGPNTRFCH
Trigger: GTGACAGAATCTTGTATTTGGGCCAAGGTGTTTCCATTTCTCAATCAGTGCAGTGATACATGTACTCCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CAA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCAGCCAGTTGGTCCTTTTaGGCTGTACGTATCACTGAG +
Preference number: 3 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTAASWSF*AVRITE
Trigger: CTCAGTGATACGTACAGCCAAAAAGGACCAACTGGC...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR-3UTR CAA 90 bp TTTAAGATAAACAGGTACTTGGGCCGTGTCACGAACATCAAATTAATCTTGTCTTTTACTGGGATACTATaGTCTAATGGAGGCTCCCGT +
Preference number: 3 (lower is better)
Translates to: FKINRYLGRVTNIKLILSFTGIL*SNGGSR
Trigger: ACGGGAGCCTCCATTAGACAATAGTATCCCAGTAAA...AGACAAGATTAATTTGATGTTCGTGACACGGCCCAAGTACCTGTTTATCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR TCA 72 bp ATAGGAGGAAAATTTATAACCACATTCCTGTGTATCTaGGGTATCAGGAGTGAAGCTGTTTCTTCTGAGTGG +
Preference number: 3 (lower is better)
Translates to: IGGKFITTFLCI*GIRSEAVSSEW
Trigger: CCACTCAGAAGAAACAGCTTCACTCCTGATACCTCAGATACACAGGAATGTGGTTATAAATTTTCCTCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR CCA 72 bp ATGAAACAAATTCAGAGTGGAGGTTCAGAAATACACTaGGCTTTGGGATCCTTTCAAGAAATGTACCGGATA +
Preference number: 3 (lower is better)
Translates to: MKQIQSGGSEIH*ALGSFQEMYRI
Trigger: TATCCGGTACATTTCTTGAAAGGATCCCAAAGCCCAGTGTATTTCTGAACCTCCACTCTGAATTTGTTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR-3UTR CAA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTCACTGTGATCATAGTTaGTTCATATTGTCTTACCCT +
Preference number: 3 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPHCDHS*FILSYP
Trigger: AGGGTAAGACAATATGAACAAACTATGATCACAGTG...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR TCA 72 bp GGACAGAGACACAAAGTTTACATTAATCTCTTGGAATaGATTAGAATCTCAAATCTCATTGCTTTACTGGGA +
Preference number: 3 (lower is better)
Translates to: GQRHKVYINLLE*IRISNLIALLG
Trigger: TCCCAGTAAAGCAATGAGATTTGAGATTCTAATTCATTCCAAGAGATTAATGTAAACTTTGTGTCTCTGTCC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR GCA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCGCAGCGGCTGGATGTaGCCCTGCGACTGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRRSGWM*PCDWGK
Trigger: CTTGCCCCAGTCGCAGGGGCACATCCAGCCGCTGCG...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACAAGAAGGTGGCCCTGTaGGGCCCCCGCCTGCACCCG +
Preference number: 4 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHKKVAL*GPRLHP
Trigger: CGGGTGCAGGCGGGGGCCCCACAGGGCCACCTTCTT...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp GCACACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGCCTTCTTGCTCCAGTTaGCTCAGGGGGTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: AHTLTRTHTHAHPLPPWRPSCSS*LRGSTL
Trigger: CAGGGTGGACCCCCTGAGTCAACTGGAGCAAGAAGG...CCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGAGGCCGACTCCGGGCTaGGTCGCAGTACTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRRPTPG*VAVLPF
Trigger: GAACGGGAGTACTGCGACGCAGCCCGGAGTCGGCCT...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR GCA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACTCCGGCGCTCAAGACTaGGCCCGCCGCGATCTCCCT +
Preference number: 4 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHSGAQD*ARRDLP
Trigger: AGGGAGATCGCGGCGGGCGCAGTCTTGAGCGCCGGA...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp GCACACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGGAGCAAGGTGGAGGCTaGCCTGGAGCATCCACAACC +
Preference number: 4 (lower is better)
Translates to: AHTLTRTHTHAHPLPPWREQGGG*PGASTT
Trigger: GGTTGTGGATGCTCCAGGGCAGCCTCCACCTTGCTC...CCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACGTCAGCCGCAGCGGCTaGATGTGCCCCTGCGACTGG +
Preference number: 4 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHVSRSG*MCPCDW
Trigger: CCAGTCGCAGGGGCACATCCAGCCGCTGCGGCTGAC...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GCACACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAGGTGGAGGCTGCCCTaGAGCATCCACAACCTCCTG +
Preference number: 4 (lower is better)
Translates to: AHTLTRTHTHAHPLPPWRRWRLP*SIHNLL
Trigger: CAGGAGGTTGTGGATGCTCCAGGGCAGCCTCCACCT...CCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp GCACACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGCCTATGAAGGCTGCCTaGTTACTCCGGGCCCACAAG +
Preference number: 4 (lower is better)
Translates to: AHTLTRTHTHAHPLPPWRPMKAA*LLRAHK
Trigger: CTTGTGGGCCCGGAGTAATCAGGCAGCCTTCATAGG...CCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TCTCCGTGCCACTGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGGAGCAAGGTGGAGGCTaGCCTGGAGCATCCACAACC +
Preference number: 4 (lower is better)
Translates to: SPCHCGMLSSLRPTVKVGEQGGG*PGASTT
Trigger: GGTTGTGGATGCTCCAGGGCAGCCTCCACCTTGCTC...CCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACAGTGGCACGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp GCACACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGGGACGGTGTCAGGTCTaGAGCAACCAGAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: AHTLTRTHTHAHPLPPWRGRCQV*SNQKVW
Trigger: CCATACCTTCTGGTTGCTTCAGACCTGACACCGTCC...CCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGTCACAGGAGAAGGGGGAGAGTCCCGGGTaGGAGGGAATCGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: CGMLSSLRPTVKVGSQEKGESPG*EGIAIS
Trigger: ACTGATGGCGATTCCCTCTCACCCGGGACTCTCCCC...CTTCTCCTGTGACCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TCTCCGTGCCACTGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGACCGCCTATGAAGGCTaGCTGATTACTCCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SPCHCGMLSSLRPTVKVGTAYEG*LITPGP
Trigger: TGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGT...CCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACAGTGGCACGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp CACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAAAGTGGTGGGCCAGATTTaGCCCTCAGGCCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: HTLTRTHTHAHPLPPWRKVVGQI*PSGHSL
Trigger: CAGACTGTGGCCTGAGGGCCAAATCTGGCCCACCAC...TTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp CACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAAAGCTCACATGCACACATaGCCGCCTATGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HTLTRTHTHAHPLPPWRKAHMHT*PPMKAA
Trigger: GGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGC...TTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAATCCGGCGCTCAAGACTaGGCCCGCCGCGATCTCCCT +
Preference number: 4 (lower is better)
Translates to: WRVPVKRPSPHSEVGSTESGAQD*ARRDLP
Trigger: AGGGAGATCGCGGCGGGCGCAGTCTTGAGCGCCGGA...TTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp CCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGTCTGAAGCAACCAGACGCAGCGGCTGGATGTaGCCCTGCGACTGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PFWLYVSLRDGVRSEATRRSGWM*PCDWGK
Trigger: CTTGCCCCAGTCGCAGGGGCACATCCAGCCGCTGCG...TCTGGTTGCTTCAGACCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp CACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAAAACCGCCTATGAAGGCTaGCTGATTACTCCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: HTLTRTHTHAHPLPPWRKTAYEG*LITPGP
Trigger: TGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGT...TTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GGTGACATGGGATCTAAACTACCCAAGAAGTCTTCACTGGCAAACCTGCCTGACAAGAAGGTGGCCCTGTaGGGCCCCCGCCTGCACCCG +
Preference number: 4 (lower is better)
Translates to: GDMGSKLPKKSSLANLPDKKVAL*GPRLHP
Trigger: CGGGTGCAGGCGGGGGCCCCACAGGGCCACCTTCTT...GTCAGGCAGGTTTGCCAGTGAAGACTTCTTGGGTAGTTTAGATCCCATGTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACGGCGCCAGAGCCCACTaGAGACAGGTTCTGGTAACG +
Preference number: 4 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHGARAH*RQVLVT
Trigger: CGTTACCAGAACCTGTCTCCAGTGGGCTCTGGCGCC...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp CCAGGTGCTCAGGACTCCATCTCTTCTTGGTCAAGGGGTGGTGGCACAAAGCTGGGCGCCAGAGCCCACTaGAGACAGGTTCTGGTAACG +
Preference number: 4 (lower is better)
Translates to: PGAQDSISSWSRGGGTKLGARAH*RQVLVT
Trigger: CGTTACCAGAACCTGTCTCCAGTGGGCTCTGGCGCC...CAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR CCA 90 bp TGCTCACATGCACACATGACCGCCTATGAAGGCTGCCTGATTACTCCGGGCCCAGCCCCACCGTCAAGGTaGGGTCACAGGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: CSHAHMTAYEGCLITPGPAPPSR*GHRRSQ
Trigger: TTGGCTTCTCCTGTGACCCCACCTTGACGGTGGGGC...TGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp TCTCCGTGCCACTGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGGCTACACCAAACAGGTaGTGGGCCAGATTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPCHCGMLSSLRPTVKVGATPNR*WARFGP
Trigger: AGGGCCAAATCTGGCCCACCACCTGTTTGGTGTAGC...CCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACAGTGGCACGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACCCGCTAAGGCTCCAGTaGTCGCGGTTCCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHPLRLQ*SRFQEP
Trigger: TGGCTCTTGGAACCGCGACCACTGGAGCCTTAGCGG...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp CAGAAGCCAGTTGGTCCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGGGGGAGAGTCCCGGGTaGGAGGGAATCGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: QKPVGPFWLYVSLRDGVRGESPG*EGIAIS
Trigger: ACTGATGGCGATTCCCTCTCACCCGGGACTCTCCCC...CCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGGACCAACTGGCTTCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGAGCAAAGTAGGCATGTaGAAGGGCTTGGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRSKVGM*KGLGRC
Trigger: ACAGCGGCCCAAGCCCTTGCACATGCCTACTTTGCT...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR GCA 90 bp CACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAAAAGCAAAGTAGGCATGTaGAAGGGCTTGGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: HTLTRTHTHAHPLPPWRKSKVGM*KGLGRC
Trigger: ACAGCGGCCCAAGCCCTTGCACATGCCTACTTTGCT...TTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR GCA 90 bp TCTCCGTGCCACTGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGCAGGCTTCCAGAGCATaGAGCCTCCTAACACGTATG +
Preference number: 4 (lower is better)
Translates to: SPCHCGMLSSLRPTVKVGQASRA*SLLTRM
Trigger: CATACGTGTTAGGAGGCTGCATGCTCTGGAAGCCTG...CCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACAGTGGCACGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GCACACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGCACCCCCTTCCACCATaGAGGAAATCTCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: AHTLTRTHTHAHPLPPWRHPLPP*RKSLQQ
Trigger: TTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTG...CCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGACACCAAACAGGTGGTaGGCCAGATTTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRTPNRW*ARFGPQ
Trigger: CTGAGGGCCAAATCTGGCCCACCACCTGTTTGGTGT...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGGCCTTCCCCTCACAGTaGAGTGGGATCAACAGAACA +
Preference number: 4 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRAFPSQ*SGINRT
Trigger: TGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGC...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp CACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAAAGCCTTCCCCTCACAGTaGAGTGGGATCAACAGAACA +
Preference number: 4 (lower is better)
Translates to: HTLTRTHTHAHPLPPWRKAFPSQ*SGINRT
Trigger: TGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGC...TTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp TCTCCGTGCCACTGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGCCTCTGCACCAAAGGTaGAGGGTAAGCAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: SPCHCGMLSSLRPTVKVGPLHQR*RVSREM
Trigger: CATTTCTCTGCTTACCCTTCACCTTTGGTGCAGAGG...CCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACAGTGGCACGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp GGTGACATGGGATCTAAACTACCCAAGAAGTCTTCACTGGCAAACCTGCCTGACAGGCCGACTCCGGGCTaGGTCGCAGTACTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: GDMGSKLPKKSSLANLPDRPTPG*VAVLPF
Trigger: GAACGGGAGTACTGCGACGCAGCCCGGAGTCGGCCT...GTCAGGCAGGTTTGCCAGTGAAGACTTCTTGGGTAGTTTAGATCCCATGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp GTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAACAGAAACCGCCGCGATCTCCCTaGACCTTCGCCCCTACAAGG +
Preference number: 4 (lower is better)
Translates to: VPVKRPSPHSEVGSTEQKPPRSP*TFAPTR
Trigger: CCTTGTAGGGGCGAAGGTGCAGGGAGATCGCGGCGG...TTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TGCTCACATGCACACATGACCGCCTATGAAGGCTGCCTGATTACTCCGGGCCCATGGGCCTTCTCTCCGTaGCACTGTGGGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: CSHAHMTAYEGCLITPGPWAFSP*HCGMLS
Trigger: TGACAACATCCCACAGTGGCACGGAGAGAAGGCCCA...TGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp TCTCCGTGCCACTGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGTCTGCCCCCATGAGATaGGTCACCAGATACACATCA +
Preference number: 4 (lower is better)
Translates to: SPCHCGMLSSLRPTVKVGSAPMR*VTRYTS
Trigger: TGATGTGTATCTGGTGACCCATCTCATGGGGGCAGA...CCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACAGTGGCACGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGTCACAGGAGAAGTTTGGAGAGTTCCCGTaGAAAGGCCTTCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: CGMLSSLRPTVKVGSQEKFGEFP*KGLPLT
Trigger: TGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAA...CTTCTCCTGTGACCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp GCACACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGACCAGTGGTATTGTCTaGCATCCTATACGGCATAAC +
Preference number: 4 (lower is better)
Translates to: AHTLTRTHTHAHPLPPWRTSGIV*HPIRHN
Trigger: GTTATGCCGTATAGGATGTCAGACAATACCACTGGT...CCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TCACAGGAGAAGCCAAAGTGGCAAAAGCATGACCGGGATTGGGGACAATTCATAAGGCCGACTCCGGGCTaGGTCGCAGTACTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: SQEKPKWQKHDRDWGQFIRPTPG*VAVLPF
Trigger: GAACGGGAGTACTGCGACGCAGCCCGGAGTCGGCCT...TATGAATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp CAGAAGCCAGTTGGTCCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGACAGCCCTCTCGACTTaGCCGGCTCAGAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: QKPVGPFWLYVSLRDGVRTALST*PAQNFS
Trigger: GCTGAAGTTCTGAGCCGGGCAAGTCGAGAGGGCTGT...CCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGGACCAACTGGCTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TCTCCGTGCCACTGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGACAAGCAGCTGTGCATaGTCAAATAGCAAGACGTGC +
Preference number: 4 (lower is better)
Translates to: SPCHCGMLSSLRPTVKVGTSSCA*SNSKTC
Trigger: GCACGTCTTGCTATTTGAGCATGCACAGCTGCTTGT...CCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACAGTGGCACGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGTCACAGGAGAAGGAATCGCCATCAGTCTaGCTCCTTCCTTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CGMLSSLRPTVKVGSQEKESPSV*LLPSCS
Trigger: GGAGCAAGAAGGAAGGAGGCAGACTGATGGCGATTC...CTTCTCCTGTGACCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGTTGGTCAAGGGGTGGTaGCACAAAGCTGATGACTTC +
Preference number: 4 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRLVKGW*HKADDF
Trigger: GAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAA...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp TGCTCACATGCACACATGACCGCCTATGAAGGCTGCCTGATTACTCCGGGCCCAGACTCCATCTCTTCTTaGTCAAGGGGTGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: CSHAHMTAYEGCLITPGPDSISS*SRGGGT
Trigger: TGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTC...TGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp CACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAAACACCCCCTTCCACCATaGAGGAAATCTCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: HTLTRTHTHAHPLPPWRKHPLPP*RKSLQQ
Trigger: TTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTG...TTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp TGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAAGCCCCACCGTCAAGGTaGGGTCACAGGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: WRVPVKRPSPHSEVGSTEAPPSR*GHRRSQ
Trigger: TTGGCTTCTCCTGTGACCCCACCTTGACGGTGGGGC...TTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACCTCTCCGTGCCACTGTaGGATGTTGTCAAGTCTACG +
Preference number: 4 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHLSVPL*DVVKST
Trigger: CGTAGACTTGACAACATCCCACAGTGGCACGGAGAG...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp CACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCCACCCTGTCCCTCTaGAGTACATGTATCACTGCA +
Preference number: 4 (lower is better)
Translates to: HTLTRTHTHAHPLPPWRKSTLSL*STCITA
Trigger: TGCAGTGATACATGTACTCCAGAGGGACAGGGTGGA...TTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GCACACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGCTCCTAACACGTATGTaGTCACATGTGCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: AHTLTRTHTHAHPLPPWRLLTRM*SHVQRP
Trigger: AGGTCTTTGCACATGTGACCACATACGTGTTAGGAG...CCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAAAACGTGGGCCTCTCCTaGGACATTTTCCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: WRVPVKRPSPHSEVGSTENVGLS*DIFQRQ
Trigger: CTGCCGCTGGAAAATGTCTCAGGAGAGGCCCACGTT...TTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp GCACACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGGGTTTTAGGTCCCTGTaGATTATGTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: AHTLTRTHTHAHPLPPWRGFRSL*IMSAEC
Trigger: ACATTCAGCTGACATAATTCACAGGGACCTAAAACC...CCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp TGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAAGCTCACATGCACACATaGCCGCCTATGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WRVPVKRPSPHSEVGSTEAHMHT*PPMKAA
Trigger: GGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGC...TTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGAATGTTGTTCAGATCTaGCCCCATGAGATGGGTCAC +
Preference number: 4 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRNVVQI*PHEMGH
Trigger: GTGACCCATCTCATGGGGGCAGATCTGAACAACATT...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp TCTCCGTGCCACTGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGCCTGCTTCTGACTACTaGGGCAGATATTCAAGAAAC +
Preference number: 4 (lower is better)
Translates to: SPCHCGMLSSLRPTVKVGPASDY*GRYSRN
Trigger: GTTTCTTGAATATCTGCCCCAGTAGTCAGAAGCAGG...CCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACAGTGGCACGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp AACGGTTCCAACTCACCTGCTTATGCTTGCCTCAAGCTACCCAGCCATCTTCCCTCAGATCTGCCCCCATaGGATGGGTCACCAGATACA +
Preference number: 4 (lower is better)
Translates to: NGSNSPAYACLKLPSHLPSDLPP*DGSPDT
Trigger: TGTATCTGGTGACCCATCTCATGGGGGCAGATCTGA...GGGAAGATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp TCACAGGAGAAGCCAAAGTGGCAAAAGCATGACCGGGATTGGGGACAATTCATAGACACCAGGGCCTCCTaGAGAGAGCAGGACAAGCAG +
Preference number: 4 (lower is better)
Translates to: SQEKPKWQKHDRDWGQFIDTRAS*REQDKQ
Trigger: CTGCTTGTCCTGCTCTCTTCAGGAGGCCCTGGTGTC...TATGAATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TCACAGGAGAAGCCAAAGTGGCAAAAGCATGACCGGGATTGGGGACAATTCATACCTTCTTGCTCCAGTTaGCTCAGGGGGTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: SQEKPKWQKHDRDWGQFIPSCSS*LRGSTL
Trigger: CAGGGTGGACCCCCTGAGTCAACTGGAGCAAGAAGG...TATGAATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGATTTCATCATCTGTGTaGCGAGCCAGTCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRISSSV*RASPKS
Trigger: GGATTTTGGACTGGCTCGGCACACAGATGATGAAAT...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR GCA 90 bp GCACACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGCAGAACTTCAGCAGCTaGAGTCTTTTAACTATCTAC +
Preference number: 4 (lower is better)
Translates to: AHTLTRTHTHAHPLPPWRQNFSS*SLLTIY
Trigger: GTAGATAGTTAAAAGACTGCAGCTGCTGAAGTTCTG...CCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGTCACAGGAGAAGGAGATGGGAGCATTATaGTCAGAAACCGAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: CGMLSSLRPTVKVGSQEKEMGAL*SETEEL
Trigger: GAGCTCTTCGGTTTCTGAGCATAATGCTCCCATCTC...CTTCTCCTGTGACCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp TGCTCACATGCACACATGACCGCCTATGAAGGCTGCCTGATTACTCCGGGCCCATGGACTGAAATGGTCTaGAGAGCTTCTTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: CSHAHMTAYEGCLITPGPWTEMV*RASSLP
Trigger: TGGCAGTGAAGAAGCTCTCCAGACCATTTCAGTCCA...TGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACTGGACTGAAATGGTCTaGAGAGCTTCTTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHWTEMV*RASSLP
Trigger: TGGCAGTGAAGAAGCTCTCCAGACCATTTCAGTCCA...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp AACCAGGTGCTCAGGACTCCATCTCTTCTTGGTCAAGGGGTGGTGGCACAAAGCTCTGCCCCCATGAGATaGGTCACCAGATACACATCA +
Preference number: 4 (lower is better)
Translates to: NQVLRTPSLLGQGVVAQSSAPMR*VTRYTS
Trigger: TGATGTGTATCTGGTGACCCATCTCATGGGGGCAGA...GCTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR CCA 90 bp GAACAGAAACCAGGTGCTCAGGACTCCATCTCTTCTTGGTCAAGGGGTGGTGGCTTGGTCAAGGGGTGGTaGCACAAAGCTGATGACTTC +
Preference number: 4 (lower is better)
Translates to: EQKPGAQDSISSWSRGGGLVKGW*HKADDF
Trigger: GAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAA...GCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGGTTTCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR CCA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCCTGCTTCTGACTACTaGGGCAGATATTCAAGAAAC +
Preference number: 4 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRPASDY*GRYSRN
Trigger: GTTTCTTGAATATCTGCCCCAGTAGTCAGAAGCAGG...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TCACAGGAGAAGCCAAAGTGGCAAAAGCATGACCGGGATTGGGGACAATTCATAAACGTGGGCCTCTCCTaGGACATTTTCCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SQEKPKWQKHDRDWGQFINVGLS*DIFQRQ
Trigger: CTGCCGCTGGAAAATGTCTCAGGAGAGGCCCACGTT...TATGAATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAATCAGATCTGCCCCCATaGGATGGGTCACCAGATACA +
Preference number: 4 (lower is better)
Translates to: WRVPVKRPSPHSEVGSTESDLPP*DGSPDT
Trigger: TGTATCTGGTGACCCATCTCATGGGGGCAGATCTGA...TTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCATTATGCATCCCACTaGCCAAATATCAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRHYASH*PNINCL
Trigger: CAGACAGTTGATATTTGGTCAGTGGGATGCATAATG...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp CACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATGCCATAATATCAGCTaGGGTGACATGGGATCTAAA +
Preference number: 4 (lower is better)
Translates to: HTLTRTHTHAHPLPPWRKCHNIS*GDMGSK
Trigger: TTTAGATCCCATGTCACCTCAGCTGATATTATGGCA...TTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACACAGCTCGGCCATTATaGATCCCACTGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHTARPL*IPLTKY
Trigger: ATATTTGGTCAGTGGGATGCATAATGGCCGAGCTGT...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR GCA 90 bp GTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAACAGAAAAGCAAAGTAGGCATGTaGAAGGGCTTGGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: VPVKRPSPHSEVGSTEQKSKVGM*KGLGRC
Trigger: ACAGCGGCCCAAGCCCTTGCACATGCCTACTTTGCT...TTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000310795.8
ENST00000468133.5
CDS-3UTR GCA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCACTTCACTGGCAAACCTaGCTGACACCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSLHWQT*LTPGPP
Trigger: AGGAGGCCCTGGTGTCAGGCAGGTTTGCCAGTGAAG...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TGCTCACATGCACACATGACCGCCTATGAAGGCTGCCTGATTACTCCGGGCCCAGGTGAGGATTTGAACTaGAATAAAGGAGATGAGGCC +
Preference number: 4 (lower is better)
Translates to: CSHAHMTAYEGCLITPGPGEDLN*NKGDEA
Trigger: GGCCTCATCTCCTTTATTGCAGTTCAAATCCTCACC...TGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAACAGAAACCTGCCGGTAGAACGTaGGCCTCTCCTGAGACATTT +
Preference number: 4 (lower is better)
Translates to: VPVKRPSPHSEVGSTEQKPAGRT*ASPETF
Trigger: AAATGTCTCAGGAGAGGCCCACGTTCTACCGGCAGG...TTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp AACGGTTCCAACTCACCTGCTTATGCTTGCCTCAAGCTACCCAGCCATCTTCCCTCTGCCCCCATGAGATaGGTCACCAGATACACATCA +
Preference number: 4 (lower is better)
Translates to: NGSNSPAYACLKLPSHLPSAPMR*VTRYTS
Trigger: TGATGTGTATCTGGTGACCCATCTCATGGGGGCAGA...GGGAAGATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp AGAACAGAAACCAGGTGCTCAGGACTCCATCTCTTCTTGGTCAAGGGGTGGTGGTTCTTGGTCAAGGGGTaGTGGCACAAAGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: RTETRCSGLHLFLVKGWWFLVKG*WHKADD
Trigger: GTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAA...CCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGGTTTCTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR CCA 90 bp TGCTCACATGCACACATGACCGCCTATGAAGGCTGCCTGATTACTCCGGGCCCATCAGCTGAGGTGACATaGGATCTAAACTACCCAAGA +
Preference number: 4 (lower is better)
Translates to: CSHAHMTAYEGCLITPGPSAEVT*DLNYPR
Trigger: TCTTGGGTAGTTTAGATCCCATGTCACCTCAGCTGA...TGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAACAGAAAACACCAAACAGGTGGTaGGCCAGATTTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VPVKRPSPHSEVGSTEQKTPNRW*ARFGPQ
Trigger: CTGAGGGCCAAATCTGGCCCACCACCTGTTTGGTGT...TTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGTCACAGGAGAAGTTCTTTTCGCATGAATaGTGGACTGAAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: CGMLSSLRPTVKVGSQEKFFSHE*WTEMVW
Trigger: CCAGACCATTTCAGTCCATCATTCATGCGAAAAGAA...CTTCTCCTGTGACCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACGGTTTTAGGTCCCTGTaGATTATGTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHGFRSL*IMSAEC
Trigger: ACATTCAGCTGACATAATTCACAGGGACCTAAAACC...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp CCAGGTGCTCAGGACTCCATCTCTTCTTGGTCAAGGGGTGGTGGCACAAAGCTGGGTTTTAGGTCCCTGTaGATTATGTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: PGAQDSISSWSRGGGTKLGFRSL*IMSAEC
Trigger: ACATTCAGCTGACATAATTCACAGGGACCTAAAACC...CAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR TCA 90 bp TGCTCACATGCACACATGACCGCCTATGAAGGCTGCCTGATTACTCCGGGCCCACATTATGCATCCCACTaGCCAAATATCAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: CSHAHMTAYEGCLITPGPHYASH*PNINCL
Trigger: CAGACAGTTGATATTTGGTCAGTGGGATGCATAATG...TGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACCATTATGCATCCCACTaGCCAAATATCAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHHYASH*PNINCL
Trigger: CAGACAGTTGATATTTGGTCAGTGGGATGCATAATG...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGGTTTCTTGCAGACTCTaGGGAGATTTTCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRVSCRL*GDFLQK
Trigger: CTTTTGAAGAAAATCTCCTCAGAGTCTGCAAGAAAC...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000468133.5
CDS-3UTR TCA 90 bp CTCTTCTTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATAGGTCAGGCCTTCCCCTCACAGTaGAGTGGGATCAACAGAACA +
Preference number: 4 (lower is better)
Translates to: LFLVKGWWHKADDFIIGQAFPSQ*SGINRT
Trigger: TGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGC...CTGACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR TCA 90 bp TGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAACAGCTCTTGTCTGCCTaGGCCAACTCTCAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: WRVPVKRPSPHSEVGSTEQLLSA*ANSQKE
Trigger: TTCTTTCTGAGAGTTGGCTCAGGCAGACAAGAGCTG...TTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGTCACAGGAGAAGTGCCATAATATCAGCTaGGGTGACATGGGATCTAAA +
Preference number: 4 (lower is better)
Translates to: CGMLSSLRPTVKVGSQEKCHNIS*GDMGSK
Trigger: TTTAGATCCCATGTCACCTCAGCTGATATTATGGCA...CTTCTCCTGTGACCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp CACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACCGCCGCGATCTCCCTaGACCTTCGCCCCTACAAGG +
Preference number: 4 (lower is better)
Translates to: HCDHSLFILSYPPTKTDTPPRSP*TFAPTR
Trigger: CCTTGTAGGGGCGAAGGTGCAGGGAGATCGCGGCGG...TGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp AACGGTTCCAACTCACCTGCTTATGCTTGCCTCAAGCTACCCAGCCATCTTCCCAAACACACTTGTGCATaGAAGCAGGCACACATGCGT +
Preference number: 4 (lower is better)
Translates to: NGSNSPAYACLKLPSHLPKHTCA*KQAHMR
Trigger: ACGCATGTGTGCCTGCTTGCATGCACAAGTGTGTTT...GGGAAGATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp AGAAACCAGGTGCTCAGGACTCCATCTCTTCTTGGTCAAGGGGTGGTGGCACAATGGACTGAAATGGTCTaGAGAGCTTCTTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: RNQVLRTPSLLGQGVVAQWTEMV*RASSLP
Trigger: TGGCAGTGAAGAAGCTCTCCAGACCATTTCAGTCCA...TTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR CCA 90 bp AACGGTTCCAACTCACCTGCTTATGCTTGCCTCAAGCTACCCAGCCATCTTCCCTGGACTGAAATGGTCTaGAGAGCTTCTTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: NGSNSPAYACLKLPSHLPWTEMV*RASSLP
Trigger: TGGCAGTGAAGAAGCTCTCCAGACCATTTCAGTCCA...GGGAAGATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp TTCTTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATAGGTCAGGCTGACTCCATCTCTTCTTaGTCAAGGGGTGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: FLVKGWWHKADDFIIGQADSISS*SRGGGT
Trigger: TGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTC...AGCCTGACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR CCA 90 bp CAGAAGCCAGTTGGTCCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGCCAGTTGGTCCTTTTTaGCTGTACGTATCACTGAGG +
Preference number: 4 (lower is better)
Translates to: QKPVGPFWLYVSLRDGVRPVGPF*LYVSLR
Trigger: CCTCAGTGATACGTACAGCCAAAAAGGACCAACTGG...CCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGGACCAACTGGCTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAGCTACACCAAACAGGTaGTGGGCCAGATTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSATPNR*WARFGP
Trigger: AGGGCCAAATCTGGCCCACCACCTGTTTGGTGTAGC...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
3UTR CAA 72 bp AGAACAGAAACCAGGTGCTCAGGACTCCATCTCTTCTaGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTC +
Preference number: 4 (lower is better)
Translates to: RTETRCSGLHLF*VKGWWHKADDF
Trigger: GAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGGTTTCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
3UTR CAA 72 bp GAAGATGATGAACGGTTCCAACTCACCTGCTTATGCTaGCCTCAAGCTACCCAGCCATCTTCCCAACTAGGC +
Preference number: 4 (lower is better)
Translates to: EDDERFQLTCLC*PQATQPSSQLG
Trigger: GCCTAGTTGGGAAGATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCGTTCATCATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp CTCCATCTCTTCTTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATATCAGATCTGCCCCCATaGGATGGGTCACCAGATACA +
Preference number: 4 (lower is better)
Translates to: LHLFLVKGWWHKADDFIISDLPP*DGSPDT
Trigger: TGTATCTGGTGACCCATCTCATGGGGGCAGATCTGA...TATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR TCA 90 bp CACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCATCTGTAAGCTTCTaGCATTTCACAATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: HTLTRTHTHAHPLPPWRKSSVSF*HFTMLF
Trigger: GAACAACATTGTGAAATGTCAGAAGCTTACAGATGA...TTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCATTTGGAGAGTTCCCGTaGAAAGGCCTTCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSFGEFP*KGLPLT
Trigger: TGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAA...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp CCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGTCTGAAGCAACCAGATCAAGAACCTGCTTCTaGCTACTGGGGCAGATATTC +
Preference number: 4 (lower is better)
Translates to: PFWLYVSLRDGVRSEATRSRTCF*LLGQIF
Trigger: GAATATCTGCCCCAGTAGTCAGAAGCAGGTTCTTGA...TCTGGTTGCTTCAGACCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAATCAAGAACCTGCTTCTaGCTACTGGGGCAGATATTC +
Preference number: 4 (lower is better)
Translates to: WRVPVKRPSPHSEVGSTESRTCF*LLGQIF
Trigger: GAATATCTGCCCCAGTAGTCAGAAGCAGGTTCTTGA...TTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp AAACCAGGTGCTCAGGACTCCATCTCTTCTTGGTCAAGGGGTGGTGGCACAAAGATTTCATCATCTGTGTaGCGAGCCAGTCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: KPGAQDSISSWSRGGGTKISSSV*RASPKS
Trigger: GGATTTTGGACTGGCTCGGCACACAGATGATGAAAT...CTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR GCA 90 bp TGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGTCACAGGAGAAGTCAAATAGCAAGACGTaGAAAACACATCCTCACTCT +
Preference number: 4 (lower is better)
Translates to: CGMLSSLRPTVKVGSQEKSNSKT*KTHPHS
Trigger: AGAGTGAGGATGTGTTTTGCACGTCTTGCTATTTGA...CTTCTCCTGTGACCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGCATGTGCAAGGGCTTaGGCCGCTGTAATTCTCTTA +
Preference number: 4 (lower is better)
Translates to: IWRVPVKRPSPHSEVGSTACARA*AAVILL
Trigger: TAAGAGAATTACAGCGGCCCAAGCCCTTGCACATGC...TGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp CTCTTCTTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATAGGTCAGGCATGTGCAAGGGCTTaGGCCGCTGTAATTCTCTTA +
Preference number: 4 (lower is better)
Translates to: LFLVKGWWHKADDFIIGQACARA*AAVILL
Trigger: TAAGAGAATTACAGCGGCCCAAGCCCTTGCACATGC...CTGACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR CCA 90 bp TGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAAATAAGGATCGGCCACTaGTTCATCATCAGGATCGTG +
Preference number: 4 (lower is better)
Translates to: WRVPVKRPSPHSEVGSTEIRIGH*FIIRIV
Trigger: CACGATCCTGATGATGAACCAGTGGCCGATCCTTAT...TTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp GGTGACATGGGATCTAAACTACCCAAGAAGTCTTCACTGGCAAACCTGCCTGACTTGGTCAAGGGGTGGTaGCACAAAGCTGATGACTTC +
Preference number: 4 (lower is better)
Translates to: GDMGSKLPKKSSLANLPDLVKGW*HKADDF
Trigger: GAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAA...GTCAGGCAGGTTTGCCAGTGAAGACTTCTTGGGTAGTTTAGATCCCATGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACATTCTTGGTCAAGGGGTaGTGGCACAAAGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: IWRVPVKRPSPHSEVGSTFLVKG*WHKADD
Trigger: GTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAA...TGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp CAGAAGCCAGTTGGTCCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGTTCTTTTCGCATGAATaGTGGACTGAAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QKPVGPFWLYVSLRDGVRFFSHE*WTEMVW
Trigger: CCAGACCATTTCAGTCCATCATTCATGCGAAAAGAA...CCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGGACCAACTGGCTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGTCACAGGAGAAGAAAATGAGCTTCAACTaGTCAATATGGTCTGTACCA +
Preference number: 4 (lower is better)
Translates to: CGMLSSLRPTVKVGSQEKKMSFN*SIWSVP
Trigger: TGGTACAGACCATATTGATCAGTTGAAGCTCATTTT...CTTCTCCTGTGACCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000229794.9
CDS-3UTR TCA 90 bp TCACAGGAGAAGCCAAAGTGGCAAAAGCATGACCGGGATTGGGGACAATTCATACAGCTCTTGTCTGCCTaGGCCAACTCTCAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SQEKPKWQKHDRDWGQFIQLLSA*ANSQKE
Trigger: TTCTTTCTGAGAGTTGGCTCAGGCAGACAAGAGCTG...TATGAATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TCACAGGAGAAGCCAAAGTGGCAAAAGCATGACCGGGATTGGGGACAATTCATACCTCTGCACCAAAGGTaGAGGGTAAGCAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: SQEKPKWQKHDRDWGQFIPLHQR*RVSREM
Trigger: CATTTCTCTGCTTACCCTTCACCTTTGGTGCAGAGG...TATGAATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGGACACCAGGGCCTCCTaGAGAGAGCAGGACAAGCAG +
Preference number: 4 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVDTRAS*REQDKQ
Trigger: CTGCTTGTCCTGCTCTCTTCAGGAGGCCCTGGTGTC...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp CCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGTCTGAAGCAACCAGAACCAGTGGTATTGTCTaGCATCCTATACGGCATAAC +
Preference number: 4 (lower is better)
Translates to: PFWLYVSLRDGVRSEATRTSGIV*HPIRHN
Trigger: GTTATGCCGTATAGGATGTCAGACAATACCACTGGT...TCTGGTTGCTTCAGACCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp GGTGACATGGGATCTAAACTACCCAAGAAGTCTTCACTGGCAAACCTGCCTGACAATGTTGTTCAGATCTaGCCCCATGAGATGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GDMGSKLPKKSSLANLPDNVVQI*PHEMGH
Trigger: GTGACCCATCTCATGGGGGCAGATCTGAACAACATT...GTCAGGCAGGTTTGCCAGTGAAGACTTCTTGGGTAGTTTAGATCCCATGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp GGACTCCATCTCTTCTTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCACAGCTCGGCCATTATaGATCCCACTGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: GLHLFLVKGWWHKADDFITARPL*IPLTKY
Trigger: ATATTTGGTCAGTGGGATGCATAATGGCCGAGCTGT...GATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR GCA 90 bp AGGCACACATGCGTGCACGCACACACACACTCACACTGTCTTATACCTCACTCAACAGCTCGGCCATTATaGATCCCACTGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: RHTCVHAHTHSHCLIPHSTARPL*IPLTKY
Trigger: ATATTTGGTCAGTGGGATGCATAATGGCCGAGCTGT...TGAGTGAGGTATAAGACAGTGTGAGTGTGTGTGTGCGTGCACGCATGTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp ATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACATGGACTGAAATGGTCTaGAGAGCTTCTTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: IWRVPVKRPSPHSEVGSTWTEMV*RASSLP
Trigger: TGGCAGTGAAGAAGCTCTCCAGACCATTTCAGTCCA...TGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp AGAAACCAGGTGCTCAGGACTCCATCTCTTCTTGGTCAAGGGGTGGTGGCACAAAATGATGGACTGAAATaGTCTGGAGAGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RNQVLRTPSLLGQGVVAQNDGLK*SGELLH
Trigger: GTGAAGAAGCTCTCCAGACCATTTCAGTCCATCATT...TTGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR CCA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCATCTGCCCCCATGAGATaGGTCACCAGATACACATCA +
Preference number: 4 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSSAPMR*VTRYTS
Trigger: TGATGTGTATCTGGTGACCCATCTCATGGGGGCAGA...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp ATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAATAAGGATCGGCCACTaGTTCATCATCAGGATCGTG +
Preference number: 4 (lower is better)
Translates to: IWRVPVKRPSPHSEVGSTIRIGH*FIIRIV
Trigger: CACGATCCTGATGATGAACCAGTGGCCGATCCTTAT...TGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp GTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAACAGAAAATAAGGATCGGCCACTaGTTCATCATCAGGATCGTG +
Preference number: 4 (lower is better)
Translates to: VPVKRPSPHSEVGSTEQKIRIGH*FIIRIV
Trigger: CACGATCCTGATGATGAACCAGTGGCCGATCCTTAT...TTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000310795.8
ENST00000468133.5
CDS-3UTR CCA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCATTCTTGGTCAAGGGGTaGTGGCACAAAGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSFLVKG*WHKADD
Trigger: GTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAA...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp GTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAACAGAAACCCCTCACAGTGAAGTaGGATCAACAGAACAGAAAC +
Preference number: 4 (lower is better)
Translates to: VPVKRPSPHSEVGSTEQKPLTVK*DQQNRN
Trigger: GTTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGG...TTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000310795.8
ENST00000468133.5
CDS-3UTR CCA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACAAGGTGGAGGCTGCCCTaGAGCATCCACAACCTCCTG +
Preference number: 4 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTRWRLP*SIHNLL
Trigger: CAGGAGGTTGTGGATGCTCCAGGGCAGCCTCCACCT...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp TGGCTTCTGTCTAAGTCCCTGCTTAGAAGCAAGAAAGCACTAGTTCCAAACTCTGTGGGGTCTAGGGACTaGGTAGAAAGGTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: WLLSKSLLRSKKALVPNSVGSRD*VERSLC
Trigger: ACAGAGGGACCTTTCTACCCAGTCCCTAGACCCCAC...AGAGTTTGGAACTAGTGCTTTCTTGCTTCTAAGCAGGGACTTAGACAGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp TTCTTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATAGGTCAGGCTCCAGATACACATCATTaGATTCCTCCAGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: FLVKGWWHKADDFIIGQAPDTHH*IPPETL
Trigger: CAAGGTCTCTGGAGGAATTCAATGATGTGTATCTGG...AGCCTGACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR TCA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAAAAGTGGCAAAAGCATaGCCGGGATTGGGGACAATT +
Preference number: 4 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSKVAKA*PGLGTI
Trigger: AATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTT...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACAGGCTGTACGTATCACTaGGGGACGGTGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTGCTYH*GTVSGL
Trigger: CAGACCTGACACCGTCCCTCAGTGATACGTACAGCC...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACCTATGAAGGCTGCCTaGTTACTCCGGGCCCACAAG +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTPMKAA*LLRAHK
Trigger: CTTGTGGGCCCGGAGTAATCAGGCAGCCTTCATAGG...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp AACGGTTCCAACTCACCTGCTTATGCTTGCCTCAAGCTACCCAGCCATCTTCCCAAACTAAATACATGGTaGAGCTCATGCTCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: NGSNSPAYACLKLPSHLPKLNTW*SSCSEN
Trigger: GTTCTCAGAGCATGAGCTTCACCATGTATTTAGTTT...GGGAAGATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR GCA 90 bp TTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATAGGTCAGGCTTTTAATGTTGTTCAGATCTaGCCCCATGAGATGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LVKGWWHKADDFIIGQAFNVVQI*PHEMGH
Trigger: GTGACCCATCTCATGGGGGCAGATCTGAACAACATT...AAAAGCCTGACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR GCA 90 bp ATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAATTTCATCATCTGTGTaGCGAGCCAGTCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: IWRVPVKRPSPHSEVGSTISSSV*RASPKS
Trigger: GGATTTTGGACTGGCTCGGCACACAGATGATGAAAT...TGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR GCA 90 bp GTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAACAGAAAACAGCTCGGCCATTATaGATCCCACTGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: VPVKRPSPHSEVGSTEQKTARPL*IPLTKY
Trigger: ATATTTGGTCAGTGGGATGCATAATGGCCGAGCTGT...TTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000310795.8
ENST00000468133.5
CDS-3UTR GCA 90 bp ATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAACAGCTCGGCCATTATaGATCCCACTGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: IWRVPVKRPSPHSEVGSTTARPL*IPLTKY
Trigger: ATATTTGGTCAGTGGGATGCATAATGGCCGAGCTGT...TGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR GCA 90 bp CACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACTTCACTGGCAAACCTaGCTGACACCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HCDHSLFILSYPPTKTDTLHWQT*LTPGPP
Trigger: AGGAGGCCCTGGTGTCAGGCAGGTTTGCCAGTGAAG...TGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACGTATGTGGTCACATGTaGAAAGACCTTTATTACAAA +
Preference number: 4 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHVCGHM*KDLYYK
Trigger: TTTGTAATAAAGGTCTTTGCACATGTGACCACATAC...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GCATCTGAGTCAAAGACTGAATATAGTTTCTTGCAGACTCTGAGGAGATTTTCTGGCGCCAGAGCCCACTaGAGACAGGTTCTGGTAACG +
Preference number: 4 (lower is better)
Translates to: ASESKTEYSFLQTLRRFSGARAH*RQVLVT
Trigger: CGTTACCAGAACCTGTCTCCAGTGGGCTCTGGCGCC...AGAAAATCTCCTCAGAGTCTGCAAGAAACTATATTCAGTCTTTGACTCAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS-3UTR CCA 90 bp CATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCTATACTCAGCGGCGCCAGAGCCCACTaGAGACAGGTTCTGGTAACG +
Preference number: 4 (lower is better)
Translates to: HGIIVWIMLSEHLGSILSGARAH*RQVLVT
Trigger: CGTTACCAGAACCTGTCTCCAGTGGGCTCTGGCGCC...GCTGAGTATAGATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp TTCTCTTATCTGAGTCCAATACAAGCATCTTCTCCAGCAAGTCGACAGCCAGGGTGGACTGAAATGGTCTaGAGAGCTTCTTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: FSYLSPIQASSPASRQPGWTEMV*RASSLP
Trigger: TGGCAGTGAAGAAGCTCTCCAGACCATTTCAGTCCA...CCCTGGCTGTCGACTTGCTGGAGAAGATGCTTGTATTGGACTCAGATAAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS-3UTR CCA 90 bp CAGAAGCCAGTTGGTCCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGGAAATGGAAACACCTTaGCCCAAATACAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: QKPVGPFWLYVSLRDGVREMETP*PKYKIL
Trigger: CAGAATCTTGTATTTGGGCCAAGGTGTTTCCATTTC...CCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGGACCAACTGGCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCACCAGATACACATCATTaGATTCCTCCAGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSPDTHH*IPPETL
Trigger: CAAGGTCTCTGGAGGAATTCAATGATGTGTATCTGG...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp AGTCAGCACACAAAGGGCATGTGTGCTTACAAACACACCCAGGTCAAAGTACAGCCAGATACACATCATTaGATTCCTCCAGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: SQHTKGMCAYKHTQVKVQPDTHH*IPPETL
Trigger: CAAGGTCTCTGGAGGAATTCAATGATGTGTATCTGG...CTGTACTTTGACCTGGGTGTGTTTGTAAGCACACATGCCCTTTGTGTGCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGGGACGGTGTCAGGTCTaGAGCAACCAGAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVGRCQV*SNQKVW
Trigger: CCATACCTTCTGGTTGCTTCAGACCTGACACCGTCC...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp CCTTTTTGGCTGTACGTATCACTGAGGGACGGTGTCAGGTCTGAAGCAACCAGAAAATTCAGCAAGTTATaGAAACGACACTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: PFWLYVSLRDGVRSEATRKFSKL*KRHFST
Trigger: GGTGGAGAAGTGTCGTTTTCATAACTTGCTGAATTT...TCTGGTTGCTTCAGACCTGACACCGTCCCTCAGTGATACGTACAGCCAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TTCTCTTATCTGAGTCCAATACAAGCATCTTCTCCAGCAAGTCGACAGCCAGGGACAGCTCGGCCATTATaGATCCCACTGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: FSYLSPIQASSPASRQPGTARPL*IPLTKY
Trigger: ATATTTGGTCAGTGGGATGCATAATGGCCGAGCTGT...CCCTGGCTGTCGACTTGCTGGAGAAGATGCTTGTATTGGACTCAGATAAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS-3UTR GCA 90 bp ACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACAGCAAAGTAGGCATGTaGAAGGGCTTGGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: TVIIVCSYCLTLPQRQTHSKVGM*KGLGRC
Trigger: ACAGCGGCCCAAGCCCTTGCACATGCCTACTTTGCT...GTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR GCA 90 bp CACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACATGGGCCTTCTCTCCGTaGCACTGTGGGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: HCDHSLFILSYPPTKTDTWAFSP*HCGMLS
Trigger: TGACAACATCCCACAGTGGCACGGAGAGAAGGCCCA...TGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAGGTGAGGATTTGAACTaGAATAAAGGAGATGAGGCC +
Preference number: 4 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSGEDLN*NKGDEA
Trigger: GGCCTCATCTCCTTTATTGCAGTTCAAATCCTCACC...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp CACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACCTGCCGGTAGAACGTaGGCCTCTCCTGAGACATTT +
Preference number: 4 (lower is better)
Translates to: HCDHSLFILSYPPTKTDTPAGRT*ASPETF
Trigger: AAATGTCTCAGGAGAGGCCCACGTTCTACCGGCAGG...TGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTGGCGCCAGAGCCCACTaGAGACAGGTTCTGGTAACG +
Preference number: 4 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPGARAH*RQVLVT
Trigger: CGTTACCAGAACCTGTCTCCAGTGGGCTCTGGCGCC...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAACAGAAAAATGATGGACTGAAATaGTCTGGAGAGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VPVKRPSPHSEVGSTEQKNDGLK*SGELLH
Trigger: GTGAAGAAGCTCTCCAGACCATTTCAGTCCATCATT...TTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000310795.8
ENST00000468133.5
CDS-3UTR CCA 90 bp ACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACGAAAGAAGAGCAAGGTaGAGGCTGCCCTGGAGCATC +
Preference number: 4 (lower is better)
Translates to: TVIIVCSYCLTLPQRQTHERRAR*RLPWSI
Trigger: GATGCTCCAGGGCAGCCTCCACCTTGCTCTTCTTTC...GTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACAAGCAACCAGAAGGTATaGGCCTTCTCTCCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTSNQKV*AFSPCH
Trigger: GTGGCACGGAGAGAAGGCCCATACCTTCTGGTTGCT...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACAAGCAACCAGAAGGTATaGGCCTTCTCTCCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTSNQKV*AFSPCH
Trigger: GTGGCACGGAGAGAAGGCCCATACCTTCTGGTTGCT...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ACACGTATGTGGTCACATGTGCAAAGACCTTTATTACAAAATATTCAGAGCAGTGTGGTGGGCCAGATTTaGCCCTCAGGCCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: TRMWSHVQRPLLQNIQSSVVGQI*PSGHSL
Trigger: CAGACTGTGGCCTGAGGGCCAAATCTGGCCCACCAC...ACTGCTCTGAATATTTTGTAATAAAGGTCTTTGCACATGTGACCACATACGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTCCGCTAAGGCTCCAGTaGTCGCGGTTCCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPPLRLQ*SRFQEP
Trigger: TGGCTCTTGGAACCGCGACCACTGGAGCCTTAGCGG...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229795.7
CDS-3UTR CCA 90 bp AGGCAAAGGGCCCCTTCAGTCATAAATGTTGGGAGGAGAATCCAGGAAGGCATATTCAGTCATAAATGTTaGGAGGAGAATCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RQRAPSVINVGRRIQEGIFSHKC*EENPGR
Trigger: CCTTCCTGGATTCTCCTCCCAACATTTATGACTGAA...TATGCCTTCCTGGATTCTCCTCCCAACATTTATGACTGAAGGGGCCCTTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp AGGCAAAGGGCCCCTTCAGTCATAAATGTTGGGAGGAGAATCCAGGAAGGCATAGGTTCAGAAATACACTaGGCTTTGGGATCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: RQRAPSVINVGRRIQEGIGSEIH*ALGSFQ
Trigger: TTGAAAGGATCCCAAAGCCCAGTGTATTTCTGAACC...TATGCCTTCCTGGATTCTCCTCCCAACATTTATGACTGAAGGGGCCCTTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp AGCAGATCGAGGGAAAAAGAAAAGCTGGGCTTTCATGGCTTCTCTCATGCCTCTGGCAGATGGTTGGGATaGAAGAGAAGACTAAGAAAG +
Preference number: 4 (lower is better)
Translates to: SRSREKEKLGFHGFSHASGRWLG*KRRLRK
Trigger: CTTTCTTAGTCTTCTCTTCCATCCCAACCATCTGCC...AGAGGCATGAGAGAAGCCATGAAAGCCCAGCTTTTCTTTTTCCCTCGATCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp TTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATAGGTCAGGCTTTTTTCTTTTCGCATGAATaGTGGACTGAAATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LVKGWWHKADDFIIGQAFFFSHE*WTEMVW
Trigger: CCAGACCATTTCAGTCCATCATTCATGCGAAAAGAA...AAAAGCCTGACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR TCA 90 bp ACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACTCAGATCTGCCCCCATaGGATGGGTCACCAGATACA +
Preference number: 4 (lower is better)
Translates to: TVIIVCSYCLTLPQRQTHSDLPP*DGSPDT
Trigger: TGTATCTGGTGACCCATCTCATGGGGGCAGATCTGA...GTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACATCAGATCTGCCCCCATaGGATGGGTCACCAGATACA +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTSDLPP*DGSPDT
Trigger: TGTATCTGGTGACCCATCTCATGGGGGCAGATCTGA...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp CATCTCTTCTTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATAGGTCATTATGCATCCCACTaGCCAAATATCAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: HLFLVKGWWHKADDFIIGHYASH*PNINCL
Trigger: CAGACAGTTGATATTTGGTCAGTGGGATGCATAATG...ACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR TCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGTTTGGAGAGTTCCCGTaGAAAGGCCTTCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVFGEFP*KGLPLT
Trigger: TGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAA...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTGGCTGTACGTATCACTaGGGGACGGTGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPGCTYH*GTVSGL
Trigger: CAGACCTGACACCGTCCCTCAGTGATACGTACAGCC...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACAACACATGACCGCCTATaGAGGCTGCCTGATTACTCC +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTTHDRL*RLPDYS
Trigger: GGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGT...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp GTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAACAGAAAAAATTCAGCAAGTTATaGAAACGACACTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: VPVKRPSPHSEVGSTEQKKFSKL*KRHFST
Trigger: GGTGGAGAAGTGTCGTTTTCATAACTTGCTGAATTT...TTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TCACAGGAGAAGCCAAAGTGGCAAAAGCATGACCGGGATTGGGGACAATTCATATATCACTGCACTGATTaGGAAATGGAAACACCTTGG +
Preference number: 4 (lower is better)
Translates to: SQEKPKWQKHDRDWGQFIYHCTD*EMETPW
Trigger: CCAAGGTGTTTCCATTTCTCAATCAGTGCAGTGATA...TATGAATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp AGGCAAAGGGCCCCTTCAGTCATAAATGTTGGGAGGAGAATCCAGGAAGGCATACTCTCAGGAAGGAAATaGATTTGCTTGGTCTCATTA +
Preference number: 4 (lower is better)
Translates to: RQRAPSVINVGRRIQEGILSGRK*ICLVSL
Trigger: TAATGAGACCAAGCAAATTCATTTCCTTCCTGAGAG...TATGCCTTCCTGGATTCTCCTCCCAACATTTATGACTGAAGGGGCCCTTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR GCA 90 bp ACACGTATGTGGTCACATGTGCAAAGACCTTTATTACAAAATATTCAGAGCAGTACAGCCCTCTCGACTTaGCCGGCTCAGAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: TRMWSHVQRPLLQNIQSSTALST*PAQNFS
Trigger: GCTGAAGTTCTGAGCCGGGCAAGTCGAGAGGGCTGT...ACTGCTCTGAATATTTTGTAATAAAGGTCTTTGCACATGTGACCACATACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACAGAATCGCCATCAGTCTaGCTCCTTCCTTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTESPSV*LLPSCS
Trigger: GGAGCAAGAAGGAAGGAGGCAGACTGATGGCGATTC...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp ACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACCAGGCTTCCAGAGCATaGAGCCTCCTAACACGTATG +
Preference number: 4 (lower is better)
Translates to: TVIIVCSYCLTLPQRQTHQASRA*SLLTRM
Trigger: CATACGTGTTAGGAGGCTGCATGCTCTGGAAGCCTG...GTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp AATCATAGCAAAAGTAAGCCAGACTCACATTCCCATGGCTTCTGTCTAAGTCCCTCATGGCTTCTCTCATaGCTCTGGCCCAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: NHSKSKPDSHSHGFCLSPSWLLS*LWPKKM
Trigger: CATTTTCTTGGGCCAGAGGCATGAGAGAAGCCATGA...GGGACTTAGACAGAAGCCATGGGAATGTGAGTCTGGCTTACTTTTGCTATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR GCA 90 bp TCAAATCTCATTGCTTTACTGGGATACTATTGTCTAATGGAGGCTCCCGTGATCCAACTCACCTGCTTATaGTTGCCTCAAGCTACCCAG +
Preference number: 4 (lower is better)
Translates to: SNLIALLGYYCLMEAPVIQLTCL*LPQATQ
Trigger: CTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTG...GATCACGGGAGCCTCCATTAGACAATAGTATCCCAGTAAAGCAATGAGATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACAGACTCCATCTCTTCTTaGTCAAGGGGTGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTDSISS*SRGGGT
Trigger: TGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTC...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACAGACTCCATCTCTTCTTaGTCAAGGGGTGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTDSISS*SRGGGT
Trigger: TGTGCCACCACCCCTTGACCAAGAAGAGATGGAGTC...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACTCTCCGTGCCACTGTaGGATGTTGTCAAGTCTACG +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTLSVPL*DVVKST
Trigger: CGTAGACTTGACAACATCCCACAGTGGCACGGAGAG...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp AGCAGATCGAGGGAAAAAGAAAAGCTGGGCTTTCATGGCTTCTCTCATGCCTCTATTCAGTGCATGACATaGAAAAGTCACTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SRSREKEKLGFHGFSHASIQCMT*KSHCPS
Trigger: AGAAGGGCAGTGACTTTTCCATGTCATGCACTGAAT...AGAGGCATGAGAGAAGCCATGAAAGCCCAGCTTTTCTTTTTCCCTCGATCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp CTCTTCTTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATAGGTCAGTCATCTGTAAGCTTCTaGCATTTCACAATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LFLVKGWWHKADDFIIGQSSVSF*HFTMLF
Trigger: GAACAACATTGTGAAATGTCAGAAGCTTACAGATGA...CTGACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR TCA 90 bp CTGGGATACTATTGTCTAATGGAGGCTCCCGTGATCTTAGTGTGTACCCAGATAGGTTTTAGGTCCCTGTaGATTATGTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: LGYYCLMEAPVILVCTQIGFRSL*IMSAEC
Trigger: ACATTCAGCTGACATAATTCACAGGGACCTAAAACC...TATCTGGGTACACACTAAGATCACGGGAGCCTCCATTAGACAATAGTATCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp ATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAAAAATGAGCTTCAACTaGTCAATATGGTCTGTACCA +
Preference number: 4 (lower is better)
Translates to: IWRVPVKRPSPHSEVGSTKMSFN*SIWSVP
Trigger: TGGTACAGACCATATTGATCAGTTGAAGCTCATTTT...TGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000468133.5
CDS-3UTR TCA 90 bp ACAGCCAGGGGATTGGCACCAATAAATACATTCGCAAAGTTCATCTTCGGCATCTTTAAGCCACATCATTaGATTCCTCCAGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: TARGLAPINTFAKFIFGIFKPHH*IPPETL
Trigger: CAAGGTCTCTGGAGGAATTCAATGATGTGGCTTAAA...GATGCCGAAGATGAACTTTGCGAATGTATTTATTGGTGCCAATCCCCTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS-3UTR GCA 90 bp TGGCTTCTGTCTAAGTCCCTGCTTAGAAGCAAGAAAGCACTAGTTCCAAACTCTATTTCATCATCTGTGTaGCGAGCCAGTCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: WLLSKSLLRSKKALVPNSISSSV*RASPKS
Trigger: GGATTTTGGACTGGCTCGGCACACAGATGATGAAAT...AGAGTTTGGAACTAGTGCTTTCTTGCTTCTAAGCAGGGACTTAGACAGAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR GCA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCACAGAACTTCAGCAGCTaGAGTCTTTTAACTATCTAC +
Preference number: 4 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSQNFSS*SLLTIY
Trigger: GTAGATAGTTAAAAGACTGCAGCTGCTGAAGTTCTG...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp CTAATGGAGGCTCCCGTGATCTTAGTGTGTACCCAGATAGAGAATAAAACACACACATGGAAAAGTCACTaGCCTTCTGGGCTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LMEAPVILVCTQIENKTHTWKSH*PSGLLL
Trigger: AAGCAAAAGCCCAGAAGGGCAGTGACTTTTCCATGT...GTGTGTTTTATTCTCTATCTGGGTACACACTAAGATCACGGGAGCCTCCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp ACAGCCAGGGGATTGGCACCAATAAATACATTCGCAAAGTTCATCTTCGGCATCAATGATGGACTGAAATaGTCTGGAGAGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: TARGLAPINTFAKFIFGINDGLK*SGELLH
Trigger: GTGAAGAAGCTCTCCAGACCATTTCAGTCCATCATT...GATGCCGAAGATGAACTTTGCGAATGTATTTATTGGTGCCAATCCCCTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS-3UTR CCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACATCTGCCCCCATGAGATaGGTCACCAGATACACATCA +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTSAPMR*VTRYTS
Trigger: TGATGTGTATCTGGTGACCCATCTCATGGGGGCAGA...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGGCATGTGCAAGGGCTTaGGCCGCTGTAATTCTCTTA +
Preference number: 4 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVACARA*AAVILL
Trigger: TAAGAGAATTACAGCGGCCCAAGCCCTTGCACATGC...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp CACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACAGCATGTGCAAGGGCTTaGGCCGCTGTAATTCTCTTA +
Preference number: 4 (lower is better)
Translates to: HCDHSLFILSYPPTKTDTACARA*AAVILL
Trigger: TAAGAGAATTACAGCGGCCCAAGCCCTTGCACATGC...TGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACATTGGTCAAGGGGTGGTaGCACAAAGCTGATGACTTC +
Preference number: 4 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTLVKGW*HKADDF
Trigger: GAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAA...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGTTCTTGGTCAAGGGGTaGTGGCACAAAGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVFLVKG*WHKADD
Trigger: GTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAA...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ACACGTATGTGGTCACATGTGCAAAGACCTTTATTACAAAATATTCAGAGCAGTGAAAGAAGAGCAAGGTaGAGGCTGCCCTGGAGCATC +
Preference number: 4 (lower is better)
Translates to: TRMWSHVQRPLLQNIQSSERRAR*RLPWSI
Trigger: GATGCTCCAGGGCAGCCTCCACCTTGCTCTTCTTTC...ACTGCTCTGAATATTTTGTAATAAAGGTCTTTGCACATGTGACCACATACGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGCAGGAGAAGCCAAAGTaGCAAAAGCATGACCGGGAT +
Preference number: 4 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVQEKPK*QKHDRD
Trigger: ATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTG...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp CACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACATCCACCCTGTCCCTCTaGAGTACATGTATCACTGCA +
Preference number: 4 (lower is better)
Translates to: HCDHSLFILSYPPTKTDTSTLSL*STCITA
Trigger: TGCAGTGATACATGTACTCCAGAGGGACAGGGTGGA...TGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp TGTGTAATCACATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCTTGGTAGAAGGCAAGTaGCAGAGGCTCCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: CVITWDYSLDHVIRTSGILVEGK*QRLPTG
Trigger: CCCTGTTGGGAGCCTCTGCCACTTGCCTTCTACCAA...GATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATGTGATTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp CATCTCTTCTTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATAGGTAAAATGAGCTTCAACTaGTCAATATGGTCTGTACCA +
Preference number: 4 (lower is better)
Translates to: HLFLVKGWWHKADDFIIGKMSFN*SIWSVP
Trigger: TGGTACAGACCATATTGATCAGTTGAAGCTCATTTT...ACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR TCA 90 bp ACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACAAAGTGGCAAAAGCATaGCCGGGATTGGGGACAATT +
Preference number: 4 (lower is better)
Translates to: TVIIVCSYCLTLPQRQTHKVAKA*PGLGTI
Trigger: AATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTT...GTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTACACATGACCGCCTATaGAGGCTGCCTGATTACTCC +
Preference number: 4 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPTHDRL*RLPDYS
Trigger: GGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGT...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp TGGCTTCTGTCTAAGTCCCTGCTTAGAAGCAAGAAAGCACTAGTTCCAAACTCTGTGAAGCTCATGCTCTaGGAACAAACACTAGAAACA +
Preference number: 4 (lower is better)
Translates to: WLLSKSLLRSKKALVPNSVKLML*EQTLET
Trigger: TGTTTCTAGTGTTTGTTCTCAGAGCATGAGCTTCAC...AGAGTTTGGAACTAGTGCTTTCTTGCTTCTAAGCAGGGACTTAGACAGAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp AGACTCACATTCCCATGGCTTCTGTCTAAGTCCCTGCTTAGAAGCAAGAAAGCAAATACCTCTTTAGGTTaGCATTGTGGTAACACTGAC +
Preference number: 4 (lower is better)
Translates to: RLTFPWLLSKSLLRSKKANTSLG*HCGNTD
Trigger: GTCAGTGTTACCACAATGTCAACCTAAAGAGGTATT...TGCTTTCTTGCTTCTAAGCAGGGACTTAGACAGAAGCCATGGGAATGTGAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR GCA 90 bp GGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCTATACTCAGCTCTCGGTTCCAACTCACCTaGTTATGCTTGCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: GIIVWIMLSEHLGSILSSRFQLT*LCLPQA
Trigger: AGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCG...AGAGCTGAGTATAGATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR GCA 90 bp CTGGGTAGAAAGGTCCCTCTGTTGGGAACAAACATTTTACATAGGATATGTGAGTGCCACGTGATTCAGTaGATGACATGGAAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LGRKVPLLGTNILHRICECHVIQ*MTWKSH
Trigger: GTGACTTTTCCATGTCATGCACTGAATCACGTGGCA...CTCACATATCCTATGTAAAATGTTTGTTCCCAACAGAGGGACCTTTCTACCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACAATAAGGATCGGCCACTaGTTCATCATCAGGATCGTG +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTIRIGH*FIIRIV
Trigger: CACGATCCTGATGATGAACCAGTGGCCGATCCTTAT...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACCCCTCACAGTGAAGTaGGATCAACAGAACAGAAAC +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTPLTVK*DQQNRN
Trigger: GTTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGG...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp CACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACCCCTCACAGTGAAGTaGGATCAACAGAACAGAAAC +
Preference number: 4 (lower is better)
Translates to: HCDHSLFILSYPPTKTDTPLTVK*DQQNRN
Trigger: GTTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGG...TGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACATGCACAGAAGCCAGTTaGTCCTTTTTGGCTGTACGT +
Preference number: 4 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTCTEAS*SFLAVR
Trigger: ACGTACAGCCAAAAAGGACCAACTGGCTTCTGTGCA...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp AGTCAGCACACAAAGGGCATGTGTGCTTACAAACACACCCAGGTCAAAGTACAGGAAAGGTCCCTCTGTTaGGAACAAACATTTTACATA +
Preference number: 4 (lower is better)
Translates to: SQHTKGMCAYKHTQVKVQERSLC*EQTFYI
Trigger: TATGTAAAATGTTTGTTCCCAACAGAGGGACCTTTC...CTGTACTTTGACCTGGGTGTGTTTGTAAGCACACATGCCCTTTGTGTGCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp CATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCTATACTCAGCAAAGCTGGGCTTTCATaGCTTCTCTCATGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HGIIVWIMLSEHLGSILSKAGLS*LLSCLW
Trigger: CCAGAGGCATGAGAGAAGCCATGAAAGCCCAGCTTT...GCTGAGTATAGATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp CTGGGTAGAAAGGTCCCTCTGTTGGGAACAAACATTTTACATAGGATATGTGAGTTTTGTTCAACTGCCTaGCAGCAGATCGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LGRKVPLLGTNILHRICEFCSTA*QQIEGK
Trigger: TTTTCCCTCGATCTGCTGCCAGGCAGTTGAACAAAA...CTCACATATCCTATGTAAAATGTTTGTTCCCAACAGAGGGACCTTTCTACCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp AATCATAGCAAAAGTAAGCCAGACTCACATTCCCATGGCTTCTGTCTAAGTCCCAAGTCACTGCCCTTCTaGGCTTTTGCTTCTTTATCT +
Preference number: 4 (lower is better)
Translates to: NHSKSKPDSHSHGFCLSPKSLPF*AFASLS
Trigger: AGATAAAGAAGCAAAAGCCCAGAAGGGCAGTGACTT...GGGACTTAGACAGAAGCCATGGGAATGTGAGTCTGGCTTACTTTTGCTATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR CAA 72 bp CAAATTCAGAGTGGAGGTTCAGAAATACACTGGGCTTaGGGATCCTTTCAAGAAATGTACCGGATACATACC +
Preference number: 4 (lower is better)
Translates to: QIQSGGSEIHWA*GSFQEMYRIHT
Trigger: GGTATGTATCCGGTACATTTCTTGAAAGGATCCCAAAGCCCAGTGTATTTCTGAACCTCCACTCTGAATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp CACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACCAGATACACATCATTaGATTCCTCCAGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: HCDHSLFILSYPPTKTDTPDTHH*IPPETL
Trigger: CAAGGTCTCTGGAGGAATTCAATGATGTGTATCTGG...TGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACCAGATACACATCATTaGATTCCTCCAGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTPDTHH*IPPETL
Trigger: CAAGGTCTCTGGAGGAATTCAATGATGTGTATCTGG...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp ACAGCCAGGGGATTGGCACCAATAAATACATTCGCAAAGTTCATCTTCGGCATCAAAATGAGCTTCAACTaGTCAATATGGTCTGTACCA +
Preference number: 4 (lower is better)
Translates to: TARGLAPINTFAKFIFGIKMSFN*SIWSVP
Trigger: TGGTACAGACCATATTGATCAGTTGAAGCTCATTTT...GATGCCGAAGATGAACTTTGCGAATGTATTTATTGGTGCCAATCCCCTGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS-3UTR TCA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACAAATAGCACTAGGGGCTaGAGAGAGGTGATATCACTT +
Preference number: 4 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTNSTRG*REVISL
Trigger: AAGTGATATCACCTCTCTTCAGCCCCTAGTGCTATT...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp AATCATAGCAAAAGTAAGCCAGACTCACATTCCCATGGCTTCTGTCTAAGTCCCTCAACTCACAGACTCTaGGGAGATTTTCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: NHSKSKPDSHSHGFCLSPSTHRL*GDFLQK
Trigger: CTTTTGAAGAAAATCTCCTCAGAGTCTGTGAGTTGA...GGGACTTAGACAGAAGCCATGGGAATGTGAGTCTGGCTTACTTTTGCTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR GCA 90 bp TCACAGGAGAAGCCAAAGTGGCAAAAGCATGACCGGGATTGGGGACAATTCATAGTATGTGGTCACATGTaGAAAGACCTTTATTACAAA +
Preference number: 4 (lower is better)
Translates to: SQEKPKWQKHDRDWGQFIVCGHM*KDLYYK
Trigger: TTTGTAATAAAGGTCTTTGCACATGTGACCACATAC...TATGAATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp CATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCTATACTCAGCTTTCTTTTGTTCAACTaGCTGGCAGCAGATCGAGGG +
Preference number: 4 (lower is better)
Translates to: HGIIVWIMLSEHLGSILSFLLFN*LAADRG
Trigger: CCCTCGATCTGCTGCCAGGCAGTTGAACAAAAGAAA...GCTGAGTATAGATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR GCA 90 bp TGTGTAATCACATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCTCACCTGCTTATGCTTaGCTCAAGCTACCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: CVITWDYSLDHVIRTSGISPAYA*LKLPSH
Trigger: ATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGA...GATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATGTGATTACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACATCAGCTGAGGTGACATaGGATCTAAACTACCCAAGA +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTSAEVT*DLNYPR
Trigger: TCTTGGGTAGTTTAGATCCCATGTCACCTCAGCTGA...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACCTCCTAACACGTATGTaGTCACATGTGCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: TVIIVCSYCLTLPQRQTHLLTRM*SHVQRP
Trigger: AGGTCTTTGCACATGTGACCACATACGTGTTAGGAG...GTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp AATCATAGCAAAAGTAAGCCAGACTCACATTCCCATGGCTTCTGTCTAAGTCCCTGTTATCAGAACATCTaGGATCTATACTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NHSKSKPDSHSHGFCLSPCYQNI*DLYSAL
Trigger: CAGAGCTGAGTATAGATCCCAGATGTTCTGATAACA...GGGACTTAGACAGAAGCCATGGGAATGTGAGTCTGGCTTACTTTTGCTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGGGTTTTAGGTCCCTGTaGATTATGTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVGFRSL*IMSAEC
Trigger: ACATTCAGCTGACATAATTCACAGGGACCTAAAACC...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR TCA 90 bp CTAATGGAGGCTCCCGTGATCTTAGTGTGTACCCAGATAGAGAATAAAACACACAAAATGAGCTTCAACTaGTCAATATGGTCTGTACCA +
Preference number: 4 (lower is better)
Translates to: LMEAPVILVCTQIENKTHKMSFN*SIWSVP
Trigger: TGGTACAGACCATATTGATCAGTTGAAGCTCATTTT...GTGTGTTTTATTCTCTATCTGGGTACACACTAAGATCACGGGAGCCTCCATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp CACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACATACACAGGAAGTACATaGCATCAAGAACCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HCDHSLFILSYPPTKTDTYTGST*HQEPAS
Trigger: AGAAGCAGGTTCTTGATGTCATGTACTTCCTGTGTA...TGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TGTGTAATCACATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCAATGTTGTTCAGATCTaGCCCCATGAGATGGGTCAC +
Preference number: 4 (lower is better)
Translates to: CVITWDYSLDHVIRTSGINVVQI*PHEMGH
Trigger: GTGACCCATCTCATGGGGGCAGATCTGAACAACATT...GATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATGTGATTACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR GCA 90 bp CACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACTGAATATAGTTTCTTaGCTCATGGCTTGGCATCCT +
Preference number: 4 (lower is better)
Translates to: HCDHSLFILSYPPTKTDTLNIVS*LMAWHP
Trigger: AGGATGCCAAGCCATGAGGCAAGAAACTATATTCAG...TGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229795.7
CDS-3UTR GCA 90 bp TTTAAGATAAACAGGTACTTGGGCCGTGTCACGAACATCAAATTAATCTTGTCTCACAAAGGGCATGTGTaGTTACAAACACACCCAGGT +
Preference number: 4 (lower is better)
Translates to: FKINRYLGRVTNIKLILSHKGHV*LQTHPG
Trigger: ACCTGGGTGTGTTTGTAAGCACACATGCCCTTTGTG...AGACAAGATTAATTTGATGTTCGTGACACGGCCCAAGTACCTGTTTATCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR GCA 90 bp TGGCTTCTGTCTAAGTCCCTGCTTAGAAGCAAGAAAGCACTAGTTCCAAACTCTGCCCTTCTGGGCTTTTaGTTCTTTATCTTAAATAAG +
Preference number: 4 (lower is better)
Translates to: WLLSKSLLRSKKALVPNSALLGF*FFILNK
Trigger: CTTATTTAAGATAAAGAAGCAAAAGCCCAGAAGGGC...AGAGTTTGGAACTAGTGCTTTCTTGCTTCTAAGCAGGGACTTAGACAGAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACAAATGATGGACTGAAATaGTCTGGAGAGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTNDGLK*SGELLH
Trigger: GTGAAGAAGCTCTCCAGACCATTTCAGTCCATCATT...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CCA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCACAGGAGAAGCCAAAGTaGCAAAAGCATGACCGGGAT +
Preference number: 4 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTAQEKPK*QKHDRD
Trigger: ATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTG...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTCCAGTTGGTCCTTTTTaGCTGTACGTATCACTGAGG +
Preference number: 4 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPPVGPF*LYVSLR
Trigger: CCTCAGTGATACGTACAGCCAAAAAGGACCAACTGG...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ACACGTATGTGGTCACATGTGCAAAGACCTTTATTACAAAATATTCAGAGCAGTTGCACAGAAGCCAGTTaGTCCTTTTTGGCTGTACGT +
Preference number: 4 (lower is better)
Translates to: TRMWSHVQRPLLQNIQSSCTEAS*SFLAVR
Trigger: ACGTACAGCCAAAAAGGACCAACTGGCTTCTGTGCA...ACTGCTCTGAATATTTTGTAATAAAGGTCTTTGCACATGTGACCACATACGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGTCCTGGGAAAAGCCCTaGTCTTTTCCCATGATAATT +
Preference number: 4 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVSWEKP*SFPMII
Trigger: AATTATCATGGGAAAAGACCAGGGCTTTTCCCAGGA...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACATCCTGGGAAAAGCCCTaGTCTTTTCCCATGATAATT +
Preference number: 4 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTSWEKP*SFPMII
Trigger: AATTATCATGGGAAAAGACCAGGGCTTTTCCCAGGA...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp TGTGTAATCACATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCAGACTCACATTCCCATaGCTTCTGTCTAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: CVITWDYSLDHVIRTSGIRLTFP*LLSKSL
Trigger: CAGGGACTTAGACAGAAGCCATGGGAATGTGAGTCT...GATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATGTGATTACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp TTTAAGATAAACAGGTACTTGGGCCGTGTCACGAACATCAAATTAATCTTGTCTCTTCTCTCATGCCTCTaGCCCAAGAAAATGACCAAG +
Preference number: 4 (lower is better)
Translates to: FKINRYLGRVTNIKLILSLLSCL*PKKMTK
Trigger: CTTGGTCATTTTCTTGGGCCAGAGGCATGAGAGAAG...AGACAAGATTAATTTGATGTTCGTGACACGGCCCAAGTACCTGTTTATCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp TGGCTTCTGTCTAAGTCCCTGCTTAGAAGCAAGAAAGCACTAGTTCCAAACTCTAAATACACTGGGCTTTaGGATCCTTTCAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: WLLSKSLLRSKKALVPNSKYTGL*DPFKKC
Trigger: ACATTTCTTGAAAGGATCCCAAAGCCCAGTGTATTT...AGAGTTTGGAACTAGTGCTTTCTTGCTTCTAAGCAGGGACTTAGACAGAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp GCATCTGAGTCAAAGACTGAATATAGTTTCTTGCAGACTCTGAGGAGATTTTCTGGTTTTAGGTCCCTGTaGATTATGTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: ASESKTEYSFLQTLRRFSGFRSL*IMSAEC
Trigger: ACATTCAGCTGACATAATTCACAGGGACCTAAAACC...AGAAAATCTCCTCAGAGTCTGCAAGAAACTATATTCAGTCTTTGACTCAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS-3UTR TCA 90 bp GCATCTGAGTCAAAGACTGAATATAGTTTCTTGCAGACTCTGAGGAGATTTTCTCATTATGCATCCCACTaGCCAAATATCAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: ASESKTEYSFLQTLRRFSHYASH*PNINCL
Trigger: CAGACAGTTGATATTTGGTCAGTGGGATGCATAATG...AGAAAATCTCCTCAGAGTCTGCAAGAAACTATATTCAGTCTTTGACTCAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS-3UTR TCA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACAGTTTCTTGCAGACTCTaGGGAGATTTTCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTVSCRL*GDFLQK
Trigger: CTTTTGAAGAAAATCTCCTCAGAGTCTGCAAGAAAC...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000468133.5
CDS-3UTR TCA 90 bp TTTAAGATAAACAGGTACTTGGGCCGTGTCACGAACATCAAATTAATCTTGTCTACATTCCTGTGTATCTaGGGTATCAGGAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: FKINRYLGRVTNIKLILSTFLCI*GIRSEA
Trigger: AGCTTCACTCCTGATACCTCAGATACACAGGAATGT...AGACAAGATTAATTTGATGTTCGTGACACGGCCCAAGTACCTGTTTATCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp TTTAAGATAAACAGGTACTTGGGCCGTGTCACGAACATCAAATTAATCTTGTCTGCACTATTTATTAATTaGGCTCCTCCCTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: FKINRYLGRVTNIKLILSALFIN*APPSAL
Trigger: AAGGGCAGAGGGAGGAGCTCAATTAATAAATAGTGC...AGACAAGATTAATTTGATGTTCGTGACACGGCCCAAGTACCTGTTTATCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR GCA 90 bp TACATTCGCAAAGTTCATCTTCGGCATCTGAGTCAAAGACTGAATATAGTTTCTATTTCATCATCTGTGTaGCGAGCCAGTCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: YIRKVHLRHLSQRLNIVSISSSV*RASPKS
Trigger: GGATTTTGGACTGGCTCGGCACACAGATGATGAAAT...AGAAACTATATTCAGTCTTTGACTCAGATGCCGAAGATGAACTTTGCGAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS-3UTR GCA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCAGAGATGGGAGCATTATaGTCAGAAACCGAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTAEMGAL*SETEEL
Trigger: GAGCTCTTCGGTTTCTGAGCATAATGCTCCCATCTC...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TTTAAGATAAACAGGTACTTGGGCCGTGTCACGAACATCAAATTAATCTTGTCTATCTATACTCAGCTCTaGCACGTGATTCAGTGCATG +
Preference number: 4 (lower is better)
Translates to: FKINRYLGRVTNIKLILSIYTQL*HVIQCM
Trigger: CATGCACTGAATCACGTGGCAGAGCTGAGTATAGAT...AGACAAGATTAATTTGATGTTCGTGACACGGCCCAAGTACCTGTTTATCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
3UTR CAA 72 bp TCCCATACATCATGCGCTTTTAAGATAAACAGGTACTaGGGCCGTGTCACGAACATCAAATTAATCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SHTSCAFKINRY*GRVTNIKLILS
Trigger: AGACAAGATTAATTTGATGTTCGTGACACGGCCCAAGTACCTGTTTATCTTAAAAGCGCATGATGTATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACATCATCTGTAAGCTTCTaGCATTTCACAATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTSSVSF*HFTMLF
Trigger: GAACAACATTGTGAAATGTCAGAAGCTTACAGATGA...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACATCATCTGTAAGCTTCTaGCATTTCACAATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTSSVSF*HFTMLF
Trigger: GAACAACATTGTGAAATGTCAGAAGCTTACAGATGA...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR TCA 90 bp TGTGTAATCACATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCCATTATGCATCCCACTaGCCAAATATCAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: CVITWDYSLDHVIRTSGIHYASH*PNINCL
Trigger: CAGACAGTTGATATTTGGTCAGTGGGATGCATAATG...GATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATGTGATTACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp GCATCTGAGTCAAAGACTGAATATAGTTTCTTGCAGACTCTGAGGAGATTTTCTGTTTCTTGCAGACTCTaGGGAGATTTTCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: ASESKTEYSFLQTLRRFSVSCRL*GDFLQK
Trigger: CTTTTGAAGAAAATCTCCTCAGAGTCTGCAAGAAAC...AGAAAATCTCCTCAGAGTCTGCAAGAAACTATATTCAGTCTTTGACTCAGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS-3UTR TCA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCAAATAGCACTAGGGGCTaGAGAGAGGTGATATCACTT +
Preference number: 4 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTANSTRG*REVISL
Trigger: AAGTGATATCACCTCTCTTCAGCCCCTAGTGCTATT...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp TCAAATCTCATTGCTTTACTGGGATACTATTGTCTAATGGAGGCTCCCGTGATCTTGAAATGTATAATGTaGCTCATTTCACAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SNLIALLGYYCLMEAPVILKCIM*LISQRD
Trigger: GTCTCTCTGTGAAATGAGGCACATTATACATTTCAA...GATCACGGGAGCCTCCATTAGACAATAGTATCCCAGTAAAGCAATGAGATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp TTTAAGATAAACAGGTACTTGGGCCGTGTCACGAACATCAAATTAATCTTGTCTAATGATGGACTGAAATaGTCTGGAGAGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: FKINRYLGRVTNIKLILSNDGLK*SGELLH
Trigger: GTGAAGAAGCTCTCCAGACCATTTCAGTCCATCATT...AGACAAGATTAATTTGATGTTCGTGACACGGCCCAAGTACCTGTTTATCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CCA 90 bp ACACGTATGTGGTCACATGTGCAAAGACCTTTATTACAAAATATTCAGAGCAGTTCTTGCCTCATGGCTTaGCATCCTGTTAATGAGATA +
Preference number: 4 (lower is better)
Translates to: TRMWSHVQRPLLQNIQSSSCLMA*HPVNEI
Trigger: TATCTCATTAACAGGATGCCAAGCCATGAGGCAAGA...ACTGCTCTGAATATTTTGTAATAAAGGTCTTTGCACATGTGACCACATACGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229795.7
CDS-3UTR TCA 90 bp GGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCTATACTCAGCTCTTCATCTGTAAGCTTCTaGCATTTCACAATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: GIIVWIMLSEHLGSILSSSSVSF*HFTMLF
Trigger: GAACAACATTGTGAAATGTCAGAAGCTTACAGATGA...AGAGCTGAGTATAGATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR TCA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCATATCACTGCACTGATTaGGAAATGGAAACACCTTGG +
Preference number: 4 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTAYHCTD*EMETPW
Trigger: CCAAGGTGTTTCCATTTCTCAATCAGTGCAGTGATA...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTTCAAATAGCAAGACGTaGAAAACACATCCTCACTCT +
Preference number: 4 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPSNSKT*KTHPHS
Trigger: AGAGTGAGGATGTGTTTTGCACGTCTTGCTATTTGA...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CCA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCAGAAATGGAAACACCTTaGCCCAAATACAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTAEMETP*PKYKIL
Trigger: CAGAATCTTGTATTTGGGCCAAGGTGTTTCCATTTC...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR GCA 90 bp CACAGAGAGACCTCCATTATTAGGCTGTGCACTCATTGTTTCTTTCTTAAAAATTCCATTATTAGGCTGTaGACTCATTGTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: HRETSIIRLCTHCFFLKNSIIRL*THCFFL
Trigger: AAGAAAGAAACAATGAGTGCACAGCCTAATAATGGA...ATTTTTAAGAAAGAAACAATGAGTGCACAGCCTAATAATGGAGGTCTCTCTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS GCA 90 bp GGGCAAGCCCCGCTAAGGGCAGGGACGCGCTCCGGCGCTCAAGACTaGGCCCGCCGCGATCTCCCTGCACCTTCGCCCCTACAAGGCCGA +
Preference number: 5 (lower is better)
Translates to: GQAPLRAGTRSGAQD*ARRDLPAPSPLQGR
Trigger: TCGGCCTTGTAGGGGCGAAGGTGCAGGGAGATCGCGGCGGGCGCAGTCTTGAGCGCCGGAGCGCGTCCCTGCCCTTAGCGGGGCTTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000622903.4
CDS GCA 90 bp AGGGACGCGCTCCGGCGCTCAAGACTGCGCCCGCCGCGATCTCCCTaGACCTTCGCCCCTACAAGGCCGACTCCGGGCTGCGTCGCAGTA +
Preference number: 5 (lower is better)
Translates to: RDALRRSRLRPPRSP*TFAPTRPTPGCVAV
Trigger: TACTGCGACGCAGCCCGGAGTCGGCCTTGTAGGGGCGAAGGTGCAGGGAGATCGCGGCGGGCGCAGTCTTGAGCGCCGGAGCGCGTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000622903.4
CDS GCA 90 bp CCGCGATCTCCCTGCACCTTCGCCCCTACAAGGCCGACTCCGGGCTaGGTCGCAGTACTCCCGTTCCAGCTGCTGCGCCCGCTAAGGCTC +
Preference number: 5 (lower is better)
Translates to: PRSPCTFAPTRPTPG*VAVLPFQLLRPLRL
Trigger: GAGCCTTAGCGGGCGCAGCAGCTGGAACGGGAGTACTGCGACGCAGCCCGGAGTCGGCCTTGTAGGGGCGAAGGTGCAGGGAGATCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000622903.4
CDS GCA 90 bp ATTGTCTTGTTCAGCTCCTTCGCCCCTACAAGGCCGACTCCGGGCTaGGTCGCAGTACTCCCGTTCCAGCTGCTGCGCCCGCTAAGGCTC +
Preference number: 5 (lower is better)
Translates to: IVLFSSFAPTRPTPG*VAVLPFQLLRPLRL
Trigger: GAGCCTTAGCGGGCGCAGCAGCTGGAACGGGAGTACTGCGACGCAGCCCGGAGTCGGCCTTGTAGGGGCGAAGGAGCTGAACAAGACAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468133.5
CDS-3UTR CAA 90 bp GCACACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGGGTGGTGGGCCAGATTaGGCCCTCAGGCCACAGTCT +
Preference number: 5 (lower is better)
Translates to: AHTLTRTHTHAHPLPPWRGGGPD*ALRPQS
Trigger: AGACTGTGGCCTGAGGGCCAAATCTGGCCCACCACC...CCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp TGCTCACATGCACACATGACCGCCTATGAAGGCTGCCTGATTACTCCGGGCCCATCCTTCTTGCTCCAGTaGACTCAGGGGGTCCACCCT +
Preference number: 5 (lower is better)
Translates to: CSHAHMTAYEGCLITPGPSFLLQ*TQGVHP
Trigger: AGGGTGGACCCCCTGAGTCAACTGGAGCAAGAAGGA...TGGGCCCGGAGTAATCAGGCAGCCTTCATAGGCGGTCATGTGTGCATGTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp TGTGGGATGTTGTCAAGTCTACGCCCCACCGTCAAGGTGGGGTCACAGGAGAAGGGCATGTGCAAGGGCTaGGGCCGCTGTAATTCTCTT +
Preference number: 5 (lower is better)
Translates to: CGMLSSLRPTVKVGSQEKGMCKG*GRCNSL
Trigger: AAGAGAATTACAGCGGCCCAAGCCCTTGCACATGCC...CTTCTCCTGTGACCCCACCTTGACGGTGGGGCGTAGACTTGACAACATCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGGTGCACAGAAGCCAGTaGGTCCTTTTTGGCTGTACG +
Preference number: 5 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRVHRSQ*VLFGCT
Trigger: CGTACAGCCAAAAAGGACCAACTGGCTTCTGTGCAC...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGTCGACAGCCAGGGGATaGGCACCAATAAATACATTC +
Preference number: 5 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRSTARG*APINTF
Trigger: GAATGTATTTATTGGTGCCAATCCCCTGGCTGTCGA...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CAA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACGCCAGTTGGTCCTTTTaGGCTGTACGTATCACTGAG +
Preference number: 5 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHASWSF*AVRITE
Trigger: CTCAGTGATACGTACAGCCAAAAAGGACCAACTGGC...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp TGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAAGGCATGTGCAAGGGCTaGGGCCGCTGTAATTCTCTT +
Preference number: 5 (lower is better)
Translates to: WRVPVKRPSPHSEVGSTEGMCKG*GRCNSL
Trigger: AAGAGAATTACAGCGGCCCAAGCCCTTGCACATGCC...TTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CAA 90 bp GTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACAGAACAGAAAGGACTCCATCTCTTCTaGGTCAAGGGGTGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: VPVKRPSPHSEVGSTEQKGLHLF*VKGWWH
Trigger: GTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCC...TTTCTGTTCTGTTGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000310795.8
ENST00000468133.5
CDS-3UTR CAA 90 bp GCACACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAGAAATGGAAACACCTaGGCCCAAATACAAGATTCT +
Preference number: 5 (lower is better)
Translates to: AHTLTRTHTHAHPLPPWRRNGNT*AQIQDS
Trigger: AGAATCTTGTATTTGGGCCAAGGTGTTTCCATTTCT...CCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGTCGTTCATTTGCTCTTaGCTTTACCCATCCACAGCA +
Preference number: 5 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRSFICS*LYPSTA
Trigger: TGCTGTGGATGGGTAAAGCAAAGAGCAAATGAACGA...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp CACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCGTTCATTTGCTCTTaGCTTTACCCATCCACAGCA +
Preference number: 5 (lower is better)
Translates to: HTLTRTHTHAHPLPPWRKSFICS*LYPSTA
Trigger: TGCTGTGGATGGGTAAAGCAAAGAGCAAATGAACGA...TTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp CGCACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGACTGAATATAGTTTCTaGCCTCATGGCTTGGCATCC +
Preference number: 5 (lower is better)
Translates to: RTRTHTPFHHGGNLCNKRTEYSF*PHGLAS
Trigger: GGATGCCAAGCCATGAGGCAAGAAACTATATTCAGT...CCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229795.7
CDS-3UTR CAA 90 bp TTCTTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATAGGTCAGGCTGGCATGTGCAAGGGCTaGGGCCGCTGTAATTCTCTT +
Preference number: 5 (lower is better)
Translates to: FLVKGWWHKADDFIIGQAGMCKG*GRCNSL
Trigger: AAGAGAATTACAGCGGCCCAAGCCCTTGCACATGCC...AGCCTGACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR CAA 90 bp CTCCATCTCTTCTTGGTCAAGGGGTGGTGGCACAAAGCTGATGACTTCATCATAGGACTCCATCTCTTCTaGGTCAAGGGGTGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: LHLFLVKGWWHKADDFIIGLHLF*VKGWWH
Trigger: GTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCC...TATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAGATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR CAA 90 bp TCACAGGAGAAGCCAAAGTGGCAAAAGCATGACCGGGATTGGGGACAATTCATATGCCACTGTGGGATGTaGTCAAGTCTACGCCCCACC +
Preference number: 5 (lower is better)
Translates to: SQEKPKWQKHDRDWGQFICHCGM*SSLRPT
Trigger: GGTGGGGCGTAGACTTGACAACATCCCACAGTGGCA...TATGAATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCATCCTTCTTGCTCCAGTaGACTCAGGGGGTCCACCCT +
Preference number: 5 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSSFLLQ*TQGVHP
Trigger: AGGGTGGACCCCCTGAGTCAACTGGAGCAAGAAGGA...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACACCAGATACACATCATaGAATTCCTCCAGAGACCTT +
Preference number: 5 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHTRYTS*NSSRDL
Trigger: AAGGTCTCTGGAGGAATTCAATGATGTGTATCTGGT...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CAA 90 bp TCACAGGAGAAGCCAAAGTGGCAAAAGCATGACCGGGATTGGGGACAATTCATAGGCATGTGCAAGGGCTaGGGCCGCTGTAATTCTCTT +
Preference number: 5 (lower is better)
Translates to: SQEKPKWQKHDRDWGQFIGMCKG*GRCNSL
Trigger: AAGAGAATTACAGCGGCCCAAGCCCTTGCACATGCC...TATGAATTGTCCCCAATCCCGGTCATGCTTTTGCCACTTTGGCTTCTCCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp CACACACTAACACGCACGCACACGCACGCACACCCCCTTCCACCATGGAGGAAACATAGTTTGTTCATATaGTCTTACCCTCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: HTLTRTHTHAHPLPPWRKHSLFI*SYPPTK
Trigger: CTTTGTGGGAGGGTAAGACAATATGAACAAACTATG...TTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGTGCGTGCGTGTTAGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CAA 90 bp AACGGTTCCAACTCACCTGCTTATGCTTGCCTCAAGCTACCCAGCCATCTTCCCAAGATAAACAGGTACTaGGGCCGTGTCACGAACATC +
Preference number: 5 (lower is better)
Translates to: NGSNSPAYACLKLPSHLPKINRY*GRVTNI
Trigger: GATGTTCGTGACACGGCCCAAGTACCTGTTTATCTT...GGGAAGATGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAGTTGGAACCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CAA 90 bp GAACAGAAACCAGGTGCTCAGGACTCCATCTCTTCTTGGTCAAGGGGTGGTGGCACCAGATACACATCATaGAATTCCTCCAGAGACCTT +
Preference number: 5 (lower is better)
Translates to: EQKPGAQDSISSWSRGGGTRYTS*NSSRDL
Trigger: AAGGTCTCTGGAGGAATTCAATGATGTGTATCTGGT...GCCACCACCCCTTGACCAAGAAGAGATGGAGTCCTGAGCACCTGGTTTCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310795.8
CDS-3UTR CAA 90 bp ACACGCACGCACACCCCCTTCCACCATGGAGGAAATCTCTGCAACAAGAGGCACCACTGTGATCATAGTTaGTTCATATTGTCTTACCCT +
Preference number: 5 (lower is better)
Translates to: TRTHTPFHHGGNLCNKRHHCDHS*FILSYP
Trigger: AGGGTAAGACAATATGAACAAACTATGATCACAGTG...GTGCCTCTTGTTGCAGAGATTTCCTCCATGGTGGAAGGGGGTGTGCGTGCGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CAA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACAGGACTCCATCTCTTCTaGGTCAAGGGGTGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTGLHLF*VKGWWH
Trigger: GTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCC...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CAA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACAGGACTCCATCTCTTCTaGGTCAAGGGGTGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTGLHLF*VKGWWH
Trigger: GTGCCACCACCCCTTGACCAAGAAGAGATGGAGTCC...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CAA 90 bp ACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACAACAGCCCTCTCGACTaGCCCGGCTCAGAACTTCAG +
Preference number: 5 (lower is better)
Translates to: TVIIVCSYCLTLPQRQTHNSPLD*PGSELQ
Trigger: CTGAAGTTCTGAGCCGGGCAAGTCGAGAGGGCTGTT...GTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTGGTGGTGGGCCAGATTaGGCCCTCAGGCCACAGTCT +
Preference number: 5 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPGGGPD*ALRPQS
Trigger: AGACTGTGGCCTGAGGGCCAAATCTGGCCCACCACC...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp ACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACCTCCCAGATTGTCTaGTTCAGCTCCTTCGCCCCT +
Preference number: 5 (lower is better)
Translates to: TVIIVCSYCLTLPQRQTHTSQIV*FSSFAP
Trigger: AGGGGCGAAGGAGCTGAACAAGACAATCTGGGAGGT...GTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468133.5
CDS-3UTR CAA 90 bp CTGGGATACTATTGTCTAATGGAGGCTCCCGTGATCTTAGTGTGTACCCAGATAAGGTCAAAGTACAGATaGGTAGAAGGCAAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LGYYCLMEAPVILVCTQIRSKYR*VEGKWQ
Trigger: CTGCCACTTGCCTTCTACCAATCTGTACTTTGACCT...TATCTGGGTACACACTAAGATCACGGGAGCCTCCATTAGACAATAGTATCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CAA 90 bp TGCACGCACACACACACTCACACTGTCTTATACCTCACTCATCCGGGAAGTCAGAGGAAGGAAATGAATTaGCTTGGTCTCATTAGCACT +
Preference number: 5 (lower is better)
Translates to: CTHTHTHTVLYLTHPGSQRKEMN*LGLIST
Trigger: AGTGCTAATGAGACCAAGCAAATTCATTTCCTTCCT...CTGACTTCCCGGATGAGTGAGGTATAAGACAGTGTGAGTGTGTGTGTGCGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CAA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCAACCAGATACACATCATaGAATTCCTCCAGAGACCTT +
Preference number: 5 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSTRYTS*NSSRDL
Trigger: AAGGTCTCTGGAGGAATTCAATGATGTGTATCTGGT...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CAA 90 bp GATTTGAACTGCAATAAAGGAGATGAGGCCTTTACTTTAAAGGTTCACTTTCCTTGCCACTGTGGGATGTaGTCAAGTCTACGCCCCACC +
Preference number: 5 (lower is better)
Translates to: DLNCNKGDEAFTLKVHFPCHCGM*SSLRPT
Trigger: GGTGGGGCGTAGACTTGACAACATCCCACAGTGGCA...AGGAAAGTGAACCTTTAAAGTAAAGGCCTCATCTCCTTTATTGCAGTTCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACAGTGCACAGAAGCCAGTaGGTCCTTTTTGGCTGTACG +
Preference number: 5 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTVHRSQ*VLFGCT
Trigger: CGTACAGCCAAAAAGGACCAACTGGCTTCTGTGCAC...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp GGTGACATGGGATCTAAACTACCCAAGAAGTCTTCACTGGCAAACCTGCCTGACAGAAATGGAAACACCTaGGCCCAAATACAAGATTCT +
Preference number: 5 (lower is better)
Translates to: GDMGSKLPKKSSLANLPDRNGNT*AQIQDS
Trigger: AGAATCTTGTATTTGGGCCAAGGTGTTTCCATTTCT...GTCAGGCAGGTTTGCCAGTGAAGACTTCTTGGGTAGTTTAGATCCCATGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACAAAAGGTTCACTTTCCTaGAAAGGGGGAGAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTKGSLS*KGGESR
Trigger: CCGGGACTCTCCCCCTTTCAAGGAAAGTGAACCTTT...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp CATGGGATTATAGTTTGGATCATGTTATCAGAACATCTGGGATCTATACTCAGCCTCACCTGCTTATGCTaGCCTCAAGCTACCCAGCCA +
Preference number: 5 (lower is better)
Translates to: HGIIVWIMLSEHLGSILSLTCLC*PQATQP
Trigger: TGGCTGGGTAGCTTGAGGCAAGCATAAGCAGGTGAG...GCTGAGTATAGATCCCAGATGTTCTGATAACATGATCCAAACTATAATCCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CAA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCACATAGTTTGTTCATATaGTCTTACCCTCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSHSLFI*SYPPTK
Trigger: CTTTGTGGGAGGGTAAGACAATATGAACAAACTATG...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CAA 90 bp ACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACGCCAGTTGGTCCTTTTaGGCTGTACGTATCACTGAG +
Preference number: 5 (lower is better)
Translates to: TVIIVCSYCLTLPQRQTHASWSF*AVRITE
Trigger: CTCAGTGATACGTACAGCCAAAAAGGACCAACTGGC...GTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCAAACAGCCCTCTCGACTaGCCCGGCTCAGAACTTCAG +
Preference number: 5 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTANSPLD*PGSELQ
Trigger: CTGAAGTTCTGAGCCGGGCAAGTCGAGAGGGCTGTT...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp AATATTTGGAGAGTTCCCGTGAAAAGGCCTTCCCCTCACAGTGAAGTGGGATCACTGATAAAATTCATCTaGCTGTGGATGGTGAGGATT +
Preference number: 5 (lower is better)
Translates to: NIWRVPVKRPSPHSEVGSLIKFI*LWMVRI
Trigger: AATCCTCACCATCCACAGCAAGATGAATTTTATCAG...TGATCCCACTTCACTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp AGCAGATCGAGGGAAAAAGAAAAGCTGGGCTTTCATGGCTTCTCTCATGCCTCTAGAAAGGTCCCTCTGTaGGGAACAAACATTTTACAT +
Preference number: 5 (lower is better)
Translates to: SRSREKEKLGFHGFSHASRKVPL*GTNILH
Trigger: ATGTAAAATGTTTGTTCCCAACAGAGGGACCTTTCT...AGAGGCATGAGAGAAGCCATGAAAGCCCAGCTTTTCTTTTTCCCTCGATCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS GCA 90 bp ATGGTCATCTGTAAGCTTCTGACATTTCACAATGTTGTTCAGATCTaGCCCCATGAGATGGGTCACCAGATACACATCATTGAATTCCTC +
Preference number: 5 (lower is better)
Translates to: MVICKLLTFHNVVQI*PHEMGHQIHIIEFL
Trigger: GAGGAATTCAATGATGTGTATCTGGTGACCCATCTCATGGGGGCAGATCTGAACAACATTGTGAAATGTCAGAAGCTTACAGATGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000310795.8
ENST00000468133.5
ENST00000472333.1
ENST00000491957.5
ENST00000496250.5
ENST00000622903.4
CDS-3UTR CAA 90 bp CTAATGGAGGCTCCCGTGATCTTAGTGTGTACCCAGATAGAGAATAAAACACACACCAGATACACATCATaGAATTCCTCCAGAGACCTT +
Preference number: 5 (lower is better)
Translates to: LMEAPVILVCTQIENKTHTRYTS*NSSRDL
Trigger: AAGGTCTCTGGAGGAATTCAATGATGTGTATCTGGT...GTGTGTTTTATTCTCTATCTGGGTACACACTAAGATCACGGGAGCCTCCATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CAA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACATCGACAGCCAGGGGATaGGCACCAATAAATACATTC +
Preference number: 5 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTSTARG*APINTF
Trigger: GAATGTATTTATTGGTGCCAATCCCCTGGCTGTCGA...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CAA 90 bp TCAAATCTCATTGCTTTACTGGGATACTATTGTCTAATGGAGGCTCCCGTGATCTTTACTGGGATACTATaGTCTAATGGAGGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: SNLIALLGYYCLMEAPVIFTGIL*SNGGSR
Trigger: ACGGGAGCCTCCATTAGACAATAGTATCCCAGTAAA...GATCACGGGAGCCTCCATTAGACAATAGTATCCCAGTAAAGCAATGAGATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS GCA 90 bp GAGATGGGTCACCAGATACACATCATTGAATTCCTCCAGAGACCTTaGAGGTGTAAAAACGTCCAACAGACCAATCACATTTTCATGTTT +
Preference number: 5 (lower is better)
Translates to: EMGHQIHIIEFLQRP*RCKNVQQTNHIFMF
Trigger: AAACATGAAAATGTGATTGGTCTGTTGGACGTTTTTACACCTGCAAGGTCTCTGGAGGAATTCAATGATGTGTATCTGGTGACCCATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000310795.8
ENST00000468133.5
ENST00000472333.1
ENST00000491957.5
ENST00000496250.5
ENST00000622903.4
CDS-3UTR CAA 90 bp GCATCTGAGTCAAAGACTGAATATAGTTTCTTGCAGACTCTGAGGAGATTTTCTTCGACAGCCAGGGGATaGGCACCAATAAATACATTC +
Preference number: 5 (lower is better)
Translates to: ASESKTEYSFLQTLRRFSSTARG*APINTF
Trigger: GAATGTATTTATTGGTGCCAATCCCCTGGCTGTCGA...AGAAAATCTCCTCAGAGTCTGCAAGAAACTATATTCAGTCTTTGACTCAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS-3UTR CAA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCAAAAGGTTCACTTTCCTaGAAAGGGGGAGAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTAKGSLS*KGGESR
Trigger: CCGGGACTCTCCCCCTTTCAAGGAAAGTGAACCTTT...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp CTGGGTAGAAAGGTCCCTCTGTTGGGAACAAACATTTTACATAGGATATGTGAGGAAATACACTGGGCTTaGGGATCCTTTCAAGAAATG +
Preference number: 5 (lower is better)
Translates to: LGRKVPLLGTNILHRICEEIHWA*GSFQEM
Trigger: CATTTCTTGAAAGGATCCCAAAGCCCAGTGTATTTC...CTCACATATCCTATGTAAAATGTTTGTTCCCAACAGAGGGACCTTTCTACCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CAA 90 bp GTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACACAACCAGATACACATCATaGAATTCCTCCAGAGACCTT +
Preference number: 5 (lower is better)
Translates to: VIIVCSYCLTLPQRQTHTTRYTS*NSSRDL
Trigger: AAGGTCTCTGGAGGAATTCAATGATGTGTATCTGGT...TGTGTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CAA 90 bp AATCATAGCAAAAGTAAGCCAGACTCACATTCCCATGGCTTCTGTCTAAGTCCCATTTCAGTAGAGCTGTaGAAATGTATAATGTGCCTC +
Preference number: 5 (lower is better)
Translates to: NHSKSKPDSHSHGFCLSPISVEL*KCIMCL
Trigger: GAGGCACATTATACATTTCAACAGCTCTACTGAAAT...GGGACTTAGACAGAAGCCATGGGAATGTGAGTCTGGCTTACTTTTGCTATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491957.5
CDS-3UTR CAA 90 bp ACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACCATAGTTTGTTCATATaGTCTTACCCTCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: TVIIVCSYCLTLPQRQTHHSLFI*SYPPTK
Trigger: CTTTGTGGGAGGGTAAGACAATATGAACAAACTATG...GTGTGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS-3UTR CAA 90 bp ACGAGCATTTACAACCAAACATGGCTGATAAAATTCATCTTGCTGTGGATGGTGCACTGTGATCATAGTTaGTTCATATTGTCTTACCCT +
Preference number: 5 (lower is better)
Translates to: TSIYNQTWLIKFILLWMVHCDHS*FILSYP
Trigger: AGGGTAAGACAATATGAACAAACTATGATCACAGTG...CACCATCCACAGCAAGATGAATTTTATCAGCCATGTTTGGTTGTAAATGCTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp GTCACTGTGATCATAGTTTGTTCATATTGTCTTACCCTCCCACAAAGACAGACACACTGTGATCATAGTTaGTTCATATTGTCTTACCCT +
Preference number: 5 (lower is better)
Translates to: VTVIIVCSYCLTLPQRQTHCDHS*FILSYP
Trigger: AGGGTAAGACAATATGAACAAACTATGATCACAGTG...TGTCTGTCTTTGTGGGAGGGTAAGACAATATGAACAAACTATGATCACAGTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000468133.5
CDS GCA 90 bp TTACTTGTTTGTTTAAGCCACATCATTGAATTCCTCCAGAGACCTTaGAGGTGTAAAAACGTCCAACAGACCAATCACATTTTCATGTTT +
Preference number: 5 (lower is better)
Translates to: LLVCLSHIIEFLQRP*RCKNVQQTNHIFMF
Trigger: AAACATGAAAATGTGATTGGTCTGTTGGACGTTTTTACACCTGCAAGGTCTCTGGAGGAATTCAATGATGTGGCTTAAACAAACAAGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS-3UTR CAA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCACACCTGAAGTATCAATaGTGTTCAACACAGAATAGC +
Preference number: 5 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTAHLKYQ*CSTQNS
Trigger: GCTATTCTGTGTTGAACACAATTGATACTTCAGGTG...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS-3UTR CAA 90 bp TTGAAAAATAGGCTTTATTTTAACCAGTGGTATTGTCTGACATCCTATACGGCACTGATAAAATTCATCTaGCTGTGGATGGTGAGGATT +
Preference number: 5 (lower is better)
Translates to: LKNRLYFNQWYCLTSYTALIKFI*LWMVRI
Trigger: AATCCTCACCATCCACAGCAAGATGAATTTTATCAG...TGCCGTATAGGATGTCAGACAATACCACTGGTTAAAATAAAGCCTATTTTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229794.9
ENST00000229795.7
CDS GCA 72 bp CTCCGGCGCTCAAGACTGCGCCCGCCGCGATCTCCCTaGACCTTCGCCCCTACAAGGCCGACTCCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LRRSRLRPPRSP*TFAPTRPTPGC
Trigger: GCAGCCCGGAGTCGGCCTTGTAGGGGCGAAGGTGCAGGGAGATCGCGGCGGGCGCAGTCTTGAGCGCCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000622903.4
CDS GCA 72 bp CCGCTAAGGGCAGGGACGCGCTCCGGCGCTCAAGACTaGGCCCGCCGCGATCTCCCTGCACCTTCGCCCCTA +
Preference number: 6 (lower is better)
Translates to: PLRAGTRSGAQD*ARRDLPAPSPL
Trigger: TAGGGGCGAAGGTGCAGGGAGATCGCGGCGGGCGCAGTCTTGAGCGCCGGAGCGCGTCCCTGCCCTTAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000622903.4
CDS GCA 72 bp CCCTGCACCTTCGCCCCTACAAGGCCGACTCCGGGCTaGGTCGCAGTACTCCCGTTCCAGCTGCTGCGCCCG +
Preference number: 6 (lower is better)
Translates to: PCTFAPTRPTPG*VAVLPFQLLRP
Trigger: CGGGCGCAGCAGCTGGAACGGGAGTACTGCGACGCAGCCCGGAGTCGGCCTTGTAGGGGCGAAGGTGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000622903.4
CDS GCA 72 bp TTCAGCTCCTTCGCCCCTACAAGGCCGACTCCGGGCTaGGTCGCAGTACTCCCGTTCCAGCTGCTGCGCCCG +
Preference number: 6 (lower is better)
Translates to: FSSFAPTRPTPG*VAVLPFQLLRP
Trigger: CGGGCGCAGCAGCTGGAACGGGAGTACTGCGACGCAGCCCGGAGTCGGCCTTGTAGGGGCGAAGGAGCTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468133.5
CDS TCA 72 bp GTAACCGCAGTTCTCTGTAGGTTCTTTTCGCATGAATaGTGGACTGAAATGGTCTGGAGAGCTTCTTCACTG +
Preference number: 6 (lower is better)
Translates to: VTAVLCRFFSHE*WTEMVWRASSL
Trigger: CAGTGAAGAAGCTCTCCAGACCATTTCAGTCCATCATTCATGCGAAAAGAACCTACAGAGAACTGCGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000310795.8
ENST00000468133.5
ENST00000472333.1
ENST00000474429.5
ENST00000491957.5
ENST00000496250.5
ENST00000622903.4
CDS CAA 72 bp AGCAGCACTCCCAGCACTGTTAATAACTTTTTGATCTaGAGGGCGCCTTACAGATCTGAATCTTTCTTGCTC +
Preference number: 6 (lower is better)
Translates to: SSTPSTVNNFLI*RAPYRSESFLL
Trigger: GAGCAAGAAAGATTCAGATCTGTAAGGCGCCCTCAAGATCAAAAAGTTATTAACAGTGCTGGGAGTGCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472333.1
CDS GCA 72 bp CACCAGATACACATCATTGAATTCCTCCAGAGACCTTaGAGGTGTAAAAACGTCCAACAGACCAATCACATT +
Preference number: 6 (lower is better)
Translates to: HQIHIIEFLQRP*RCKNVQQTNHI
Trigger: AATGTGATTGGTCTGTTGGACGTTTTTACACCTGCAAGGTCTCTGGAGGAATTCAATGATGTGTATCTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000310795.8
ENST00000468133.5
ENST00000472333.1
ENST00000491957.5
ENST00000496250.5
ENST00000622903.4
CDS GCA 72 bp TGTAAGCTTCTGACATTTCACAATGTTGTTCAGATCTaGCCCCATGAGATGGGTCACCAGATACACATCATT +
Preference number: 6 (lower is better)
Translates to: CKLLTFHNVVQI*PHEMGHQIHII
Trigger: AATGATGTGTATCTGGTGACCCATCTCATGGGGGCAGATCTGAACAACATTGTGAAATGTCAGAAGCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000229794.9
ENST00000229795.7
ENST00000310795.8
ENST00000468133.5
ENST00000472333.1
ENST00000491957.5
ENST00000496250.5
ENST00000622903.4
CDS CAA 72 bp GTCAAAAGCAGCACTCCCAGCACTGTTAATAACTTTTaGATCTTGAGGGCGCCTTACAGATCTGAATCTTTC +
Preference number: 6 (lower is better)
Translates to: VKSSTPSTVNNF*ILRAPYRSESF
Trigger: GAAAGATTCAGATCTGTAAGGCGCCCTCAAGATCAAAAAGTTATTAACAGTGCTGGGAGTGCTGCTTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472333.1
CDS GCA 72 bp TGTTTAAGCCACATCATTGAATTCCTCCAGAGACCTTaGAGGTGTAAAAACGTCCAACAGACCAATCACATT +
Preference number: 6 (lower is better)
Translates to: CLSHIIEFLQRP*RCKNVQQTNHI
Trigger: AATGTGATTGGTCTGTTGGACGTTTTTACACCTGCAAGGTCTCTGGAGGAATTCAATGATGTGGCTTAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474429.5
CDS CAA 72 bp CTGAAGCCTCTTTCTTGGCAAGGCAAGCTACTCAGTTaGAAGAAAGACCTCATAATGCATTATCTAGACTAT +
Preference number: 6 (lower is better)
Translates to: LKPLSWQGKLLS*KKDLIMHYLDY
Trigger: ATAGTCTAGATAATGCATTATGAGGTCTTTCTTCAAACTGAGTAGCTTGCCTTGCCAAGAAAGAGGCTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490379.1
CDS TCA 72 bp ACTTATGAGGAATTTTTCCAACTCACAAAAGTAAACTaGAGCCTCTTTCTTGGCAAGGCAAGCTACTCAGTT +
Preference number: 6 (lower is better)
Translates to: TYEEFFQLTKVN*SLFLGKASYSV
Trigger: AACTGAGTAGCTTGCCTTGCCAAGAAAGAGGCTTCAGTTTACTTTTGTGAGTTGGAAAAATTCCTCATAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490379.1
CDS CAA 90 bp AAAAGTAAACTGAAGCCTCTTTCTTGGCAAGGCAAGCTACTCAGTTaGAAGAAAGACCTCATAATGCATTATCTAGACTATAAAAGCAAA +
Preference number: 6 (lower is better)
Translates to: KSKLKPLSWQGKLLS*KKDLIMHYLDYKSK
Trigger: TTTGCTTTTATAGTCTAGATAATGCATTATGAGGTCTTTCTTCAAACTGAGTAGCTTGCCTTGCCAAGAAAGAGGCTTCAGTTTACTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490379.1