RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAPK13 (Homo sapiens)

Ensembl gene IDs: ENSG00000156711

Ensembl transcript IDs: ENST00000211287.9, ENST00000373759.1, ENST00000373766.9, ENST00000476951.5, ENST00000490334.1

Found 581 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGAAGGGATaGGTGAGGGCCTGCGCGGCCGTCAGGCGCTTGTCCACGTCTAGC +
Preference number: 1 (lower is better)
Translates to: ASVSSSGSRKGSKKG*VRACAAVRRLSTSS
Trigger: GCTAGACGTGGACAAGCGCCTGACGGCCGCGCAGGCCCTCACCCATCCCTTCTTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373759.1
3UTR TCA 90 bp CCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGAAGGGATGGGTaGGGGCCTGCGCGGCCGTCAGGCGCTTGTCCACGTCTAGCTCCA +
Preference number: 1 (lower is better)
Translates to: PSLPQGPGRVQRRDG*GPARPSGACPRLAP
Trigger: TGGAGCTAGACGTGGACAAGCGCCTGACGGCCGCGCAGGCCCTCACCCATCCCTTCTTTGAACCCTTCCGGGACCCTGAGGAAGAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
3UTR CCA 90 bp ATCCCTAGGAAACCAACACAGCATCACTGCCATAGGCCCCCGGCCTaGCTCAGCGCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGC +
Preference number: 1 (lower is better)
Translates to: IPRKPTQHHCHRPPA*LSAHSAPLWREGKG
Trigger: GCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGCGCTGAGCCAGGCCGGGGGCCTATGGCAGTGATGCTGTGTTGGTTTCCTAGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 90 bp GCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCTGCTTCCTGCTaGGCTCTCTGCCACCTTCCATATGACATTGGCCTGGTCGGGGCA +
Preference number: 1 (lower is better)
Translates to: AAQRYSPGPPTSASC*ALCHLPYDIGLVGA
Trigger: TGCCCCGACCAGGCCAATGTCATATGGAAGGTGGCAGAGAGCCCAGCAGGAAGCAGAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR TCA 90 bp AATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGCCATGCAAGATaGGTCCCTACAGCTTCATGCCACTCCGGCGCCGTGAGTCCTTCC +
Preference number: 1 (lower is better)
Translates to: NTGPWAVSGRRCHAR*VPTASCHSGAVSPS
Trigger: GGAAGGACTCACGGCGCCGGAGTGGCATGAAGCTGTAGGGACTCATCTTGCATGGCACCGCCGGCCAGACACTGCCCAAGGACCAGTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
3UTR CCA 90 bp CTGCTTCCTGCTGGGCTCTCTGCCACCTTCCATATGACATTGGCCTaGTCGGGGCAAAGAAGTGACCGACAGGCCCCTGGGACATCTTTC +
Preference number: 1 (lower is better)
Translates to: LLPAGLSATFHMTLA*SGQRSDRQAPGTSF
Trigger: GAAAGATGTCCCAGGGGCCTGTCGGTCACTTCTTTGCCCCGACCAGGCCAATGTCATATGGAAGGTGGCAGAGAGCCCAGCAGGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 90 bp AAGCTCTGGAGAGCTGTGCCATCTCCCAAAGGGAGCAGAACGGTTTaGCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGC +
Preference number: 1 (lower is better)
Translates to: KLWRAVPSPKGSRTV*HQARQEPISACAAR
Trigger: GCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCAAACCGTTCTGCTCCCTTTGGGAGATGGCACAGCTCTCCAGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTaGCCACTGGGCAAGACCCAAACCCGTGGAACCCCCACTCCCTCT +
Preference number: 1 (lower is better)
Translates to: PHSRRMDLFPITQAM*PLGKTQTRGTPTPS
Trigger: AGAGGGAGTGGGGGTTCCACGGGTTTGGGTCTTGCCCAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 90 bp ACCCCGCAGGAGGAACCAGAGCAGGAGAATCCCTGGCACCACCCTTaGTCCAGTACACACCCATGGGTGCTCAATGAAGAAGTGAGGACA +
Preference number: 1 (lower is better)
Translates to: TPQEEPEQENPWHHP*SSTHPWVLNEEVRT
Trigger: TGTCCTCACTTCTTCATTGAGCACCCATGGGTGTGTACTGGAGCAAGGGTGGTGCCAGGGATTCTCCTGCTCTGGTTCCTCCTGCGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 90 bp GCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTaGGCAAGACCCAAACCCGTGGAACCCCCACTCCCTCTACTCCCC +
Preference number: 1 (lower is better)
Translates to: AGEWTCFLLHRPCAH*ARPKPVEPPLPLLP
Trigger: GGGGAGTAGAGGGAGTGGGGGTTCCACGGGTTTGGGTCTTGCCCAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 90 bp AGGGAGCAGAACGGTTTGCCATCAAGCCAGGCAAGAGCCCATTTCTaGCTGTGCAGCTCGCAGTCTCCGAGCCTGCTGTTGTTTCATATC +
Preference number: 1 (lower is better)
Translates to: REQNGLPSSQARAHF*LCSSQSPSLLLFHI
Trigger: GATATGAAACAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCAAACCGTTCTGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 90 bp AGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTaGCCGGCGGTGCCATGCAAGATGAGTCCCTACAGCTTCATGCCA +
Preference number: 1 (lower is better)
Translates to: RAEFGSDKYWSLGSV*PAVPCKMSPYSFMP
Trigger: TGGCATGAAGCTGTAGGGACTCATCTTGCATGGCACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
3UTR TCA 90 bp GTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGCTGGGCAACCCTTaGATCCAAGCTGGGTACAGTGCTCAAGCCTACTTGGGTTCCAAT +
Preference number: 1 (lower is better)
Translates to: VRVSDWREEGRLGNP*IQAGYSAQAYLGSN
Trigger: ATTGGAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTGGATTCAAGGGTTGCCCAGCCTTCCCTCTTCACGCCAGTCTGAGACCCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 90 bp TCATCCACTGTGAGTTTCTCGTGTTCTAAGGAATCATCAAACGGCTaGTGGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAG +
Preference number: 1 (lower is better)
Translates to: SSTVSFSCSKESSNG*WASVSSSGSRKGSK
Trigger: CTTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACGAGAAACTCACAGTGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373759.1
3UTR CCA 90 bp AAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACGTaGCCTGTTAGGATCAGAGCTAGTTTCTCCCAACCGACATCTTTG +
Preference number: 1 (lower is better)
Translates to: KGPHLQAILQMGSLT*PVRIRASFSQPTSL
Trigger: CAAAGATGTCGGTTGGGAGAAACTAGCTCTGATCCTAACAGGCCACGTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 90 bp TCCACTGTGAGTTTCTCGTGTTCTAAGGAATCATCAAACGGCTGCTaGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGAAG +
Preference number: 1 (lower is better)
Translates to: STVSFSCSKESSNGC*ASVSSSGSRKGSKK
Trigger: CTTCTTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACGAGAAACTCACAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373759.1
3UTR GCA 90 bp CAGAACGGTTTGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTaGAGCTCGCAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATT +
Preference number: 1 (lower is better)
Translates to: QNGLPSSQARAHFCL*SSQSPSLLLFHILI
Trigger: AATCAAGATATGAAACAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCAAACCGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 90 bp AAAGGCTGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTaGTCCTTGGGCAGTGTCTGGCCGGCGGTGCCATGCAAGATGAGT +
Preference number: 1 (lower is better)
Translates to: KGCIPRRAEFGSDKY*SLGSVWPAVPCKMS
Trigger: ACTCATCTTGCATGGCACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACAGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 90 bp AGTACACACCCATGGGTGCTCAATGAAGAAGTGAGGACAACTTGCTaGCATCTTCAGTTTGATGGAATGGCCTTAGGCCTCTGCTGCCGA +
Preference number: 1 (lower is better)
Translates to: STHPWVLNEEVRTTC*HLQFDGMALGLCCR
Trigger: TCGGCAGCAGAGGCCTAAGGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAGCACCCATGGGTGTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 90 bp TCCAGTACACACCCATGGGTGCTCAATGAAGAAGTGAGGACAACTTaGTGCCATCTTCAGTTTGATGGAATGGCCTTAGGCCTCTGCTGC +
Preference number: 1 (lower is better)
Translates to: SSTHPWVLNEEVRTT*CHLQFDGMALGLCC
Trigger: GCAGCAGAGGCCTAAGGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAGCACCCATGGGTGTGTACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 90 bp CACTCATTATTCATTCACGCACAGGTATTTGCTCACAGTGGGCAATaGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGG +
Preference number: 1 (lower is better)
Translates to: HSLFIHAQVFAHSGQ*EGEAKPHTKCCPQR
Trigger: CCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATTGCCCACTGTGAGCAAATACCTGTGCGTGAATGAATAATGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 90 bp GCAGGGAGAGATTCCTCCCTCCTCAGCTGTAGCTATAGCATTGCTTaGGGCCATGGAAAAACAGTTTTCCACACCCTAGCAGACAGCAAA +
Preference number: 1 (lower is better)
Translates to: AGRDSSLLSCSYSIA*GHGKTVFHTLADSK
Trigger: TTTGCTGTCTGCTAGGGTGTGGAAAACTGTTTTTCCATGGCCCCAAGCAATGCTATAGCTACAGCTGAGGAGGGAGGAATCTCTCCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR TCA 90 bp GGAACGGATCTCTTTACTGCAGGACTTGTCAAGACCTTTAACCTGTaGATGCAGAATGAACCTTACGGTGGATCCCAGGACTGGTGTCCC +
Preference number: 1 (lower is better)
Translates to: GTDLFTAGLVKTFNL*MQNEPYGGSQDWCP
Trigger: GGGACACCAGTCCTGGGATCCACCGTAAGGTTCATTCTGCATTCACAGGTTAAAGGTCTTGACAAGTCCTGCAGTAAAGAGATCCGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR TCA 90 bp TTTCCACACCCTAGCAGACAGCAAAAGCTATTTCAATGTGCCAAGTaGAAGTTGAGCCATGCCCTCATCCAAACTAGCCCCCAGCCTCAC +
Preference number: 1 (lower is better)
Translates to: FPHPSRQQKLFQCAK*KLSHALIQTSPQPH
Trigger: GTGAGGCTGGGGGCTAGTTTGGATGAGGGCATGGCTCAACTTTCACTTGGCACATTGAAATAGCTTTTGCTGTCTGCTAGGGTGTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 90 bp CGGATCTCTTTACTGCAGGACTTGTCAAGACCTTTAACCTGTGAATaGAGAATGAACCTTACGGTGGATCCCAGGACTGGTGTCCCACAC +
Preference number: 1 (lower is better)
Translates to: RISLLQDLSRPLTCE*RMNLTVDPRTGVPH
Trigger: GTGTGGGACACCAGTCCTGGGATCCACCGTAAGGTTCATTCTGCATTCACAGGTTAAAGGTCTTGACAAGTCCTGCAGTAAAGAGATCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 90 bp TCAGATAAAAACAGAGAGGTTCTAGCCACTGTCAGGTCAAAGCTCTaGAGAGCTGTGCCATCTCCCAAAGGGAGCAGAACGGTTTGCCAT +
Preference number: 1 (lower is better)
Translates to: SDKNREVLATVRSKL*RAVPSPKGSRTVCH
Trigger: ATGGCAAACCGTTCTGCTCCCTTTGGGAGATGGCACAGCTCTCCAGAGCTTTGACCTGACAGTGGCTAGAACCTCTCTGTTTTTATCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 90 bp GATCTTAGGGAATTGTTCAAATTTAAGGAAGCAAAAGCCAAGAGTTaGGAGGAGAGGCAGGGAGAGATTCCTCCCTCCTCAGCTGTAGCT +
Preference number: 1 (lower is better)
Translates to: DLRELFKFKEAKAKS*EERQGEIPPSSAVA
Trigger: AGCTACAGCTGAGGAGGGAGGAATCTCTCCCTGCCTCTCCTCCCAACTCTTGGCTTTTGCTTCCTTAAATTTGAACAATTCCCTAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCGCCACTCCGGCGCCGTaGGTCCTTCCGGGCAATGGG +
Preference number: 2 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFATPAP*VLPGNG
Trigger: CCCATTGCCCGGAAGGACTCACGGCGCCGGAGTGGC...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373766.9
3UTR-3UTR CCA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCCATAGGCCCCCGGCCTaGCTCAGCGCCCACTCAGCC +
Preference number: 2 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFHRPPA*LSAHSA
Trigger: GGCTGAGTGGGCGCTGAGCCAGGCCGGGGGCCTATG...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GAGAGGCTGCAGGCGGAGGCGAGGAAGCCCGAGGCCCCAGCTCTTACGCTTCCAGGTTCAAAGAAGGGATaGGTGAGGGCCTGCGCGGCC +
Preference number: 2 (lower is better)
Translates to: ERLQAEARKPEAPALTLPGSKKG*VRACAA
Trigger: GGCCGCGCAGGCCCTCACCCATCCCTTCTTTGAACC...TGGAAGCGTAAGAGCTGGGGCCTCGGGCTTCCTCGCCTCCGCCTGCAGCCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
3UTR-3UTR GCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGGCAAGAGCCCATTTCTaGCTGTGCAGCTCGCAGTCT +
Preference number: 2 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLARAHF*LCSSQS
Trigger: AGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGC...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGGAATCATCAAACGGCTaGTGGGCCTCCGTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLESSNG*WASVSS
Trigger: GGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTC...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373766.9
3UTR-3UTR GCA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCGTCCCTACAGCTTCATaGCACTCCGGCGCCGTGAGT +
Preference number: 2 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFVPTAS*HSGAVS
Trigger: ACTCACGGCGCCGGAGTGGCATGAAGCTGTAGGGAC...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373766.9
3UTR-3UTR GCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCCCAAGCTGGGTACAGTaGTCAAGCCTACTTGGGTTC +
Preference number: 2 (lower is better)
Translates to: GQHHPNPRQASPALGHRCPSWVQ*SSLLGF
Trigger: GAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTGG...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGAAACCACACACTAAATaGTGCCCACAGAGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLKPHTK*CPQRAC
Trigger: GCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTT...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGGGTTTAATTCCGGAGTaGGGATGGCCTAGGAGGACA +
Preference number: 2 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLGLIPE*GWPRRT
Trigger: TGTCCTCCTAGGCCATCCCCACTCCGGAATTAAACC...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GCAGCTGCCCAGCTGAGCAGGGACCCCGCAGGAGGAACCAGAGCAGGAGAATCCGGCACCCGTGCACACTaGGTTCACCCTTACGGAGCT +
Preference number: 2 (lower is better)
Translates to: AAAQLSRDPAGGTRAGESGTRAH*VHPYGA
Trigger: AGCTCCGTAAGGGTGAACCCAGTGTGCACGGGTGCC...GGATTCTCCTGCTCTGGTTCCTCCTGCGGGGTCCCTGCTCAGCTGGGCAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCAGGTTCAAGCAATTCTaGCTCAGCCTCCCGAGTAGT +
Preference number: 2 (lower is better)
Translates to: GQHHPNPRQASPALGHRCRFKQF*LSLPSS
Trigger: ACTACTCGGGAGGCTGAGGCAGAATTGCTTGAACCT...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGTCACGCACAGGTATTTaGTCACAGTGGGCAATGGGA +
Preference number: 2 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLSRTGI*SQWAMG
Trigger: TCCCATTGCCCACTGTGAGCAAATACCTGTGCGTGA...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCGGTAGTGACAAATACTaGTCCTTGGGCAGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: GQHHPNPRQASPALGHRCGSDKY*SLGSVW
Trigger: CCAGACACTGCCCAAGGACCAGTATTTGTCACTACC...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCTGCTGTCTGTTTTCATaGATGACTCAGGCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: GQHHPNPRQASPALGHRCCCLFS*MTQAPA
Trigger: TGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCA...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCCCTCACACCAGGGGCTaGGAGAGCCCGCCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: VLRNHQTAAGPPSLPQGPPHTRG*ESPPSG
Trigger: CCCAGAGGGCGGGCTCTCCCAGCCCCTGGTGTGAGG...GGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373759.1
3UTR-3UTR GCA 90 bp GCAGCTGCCCAGCTGAGCAGGGACCCCGCAGGAGGAACCAGAGCAGGAGAATCCACAGGCGTGAGCTACTaGGACCGGCCTGTGGTTTAT +
Preference number: 2 (lower is better)
Translates to: AAAQLSRDPAGGTRAGESTGVSY*DRPVVY
Trigger: ATAAACCACAGGCCGGTCGCAGTAGCTCACGCCTGT...GGATTCTCCTGCTCTGGTTCCTCCTGCGGGGTCCCTGCTCAGCTGGGCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCATCCTTGGGCAGTGTCTaGCCGGCGGTGCCATGCAAG +
Preference number: 2 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPSLGSV*PAVPCK
Trigger: CTTGCATGGCACCGCCGGCCAGACACTGCCCAAGGA...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCACACAGGATTAGGGTaGGCCCTAAATCCAATGACT +
Preference number: 2 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLHTGLG*ALNPMT
Trigger: AGTCATTGGATTTAGGGCCCACCCTAATCCTGTGTG...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 90 bp TGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCCTACTaGGGGAGAGGCAATATCGGGACCTGTGCACTGGGCTGCACTGGG +
Preference number: 2 (lower is better)
Translates to: WRAFHARALKEGQAY*GRGNIGTCALGCTG
Trigger: CCCAGTGCAGCCCAGTGCACAGGTCCCGATATTGCCTCTCCCCAAGTAGGCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCCTTCTGTCCTCTGCTTaGAAGGCTGTATTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: GQHHPNPRQASPALGHRCLLSSA*KAVFQE
Trigger: TTCTTGGAATACAGCCTTTCAAGCAGAGGACAGAAG...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCAGACTCCCCAGCTCCTTaGCAGCAGGGCCATTCTGTG +
Preference number: 2 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPDSPAP*QQGHSV
Trigger: CACAGAATGGCCCTGCTGTCAAGGAGCTGGGGAGTC...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp GTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCCAAAGAAGGGATGGGTaGGGGCCTGCGCGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: VLRNHQTAAGPPSLPQGPQRRDG*GPARPS
Trigger: TGACGGCCGCGCAGGCCCTCACCCATCCCTTCTTTG...GGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373759.1
3UTR-3UTR GCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCAGGCTATGTGTGTCATaGTGTTGGGAGAAAATGGGT +
Preference number: 2 (lower is better)
Translates to: GQHHPNPRQASPALGHRCRLCVS*CWEKMG
Trigger: ACCCATTTTCTCCCAACAGCATGACACACATAGCCT...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCATGGCCGGCGGTGCCATaGAAGATGAGTCCCTACAGC +
Preference number: 2 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPWPAVP*KMSPYS
Trigger: GCTGTAGGGACTCATCTTGCATGGCACCGCCGGCCA...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373766.9
3UTR-3UTR CCA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCACACTCAGCCCCACTCTaGCGGGAAGGAAAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPAHSAPL*REGKGP
Trigger: GGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTG...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCCACTCAGCCCCACTCTaGCGGGAAGGAAAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSHSAPL*REGKGP
Trigger: GGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTG...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 90 bp CCACTTCTGCTTCCTGCTGGGCTCTCTGCCACCTTCCATATGACATaGGCCTGGTCGGGGCAAAGAAGTGACCGACAGGCCCCTGGGACA +
Preference number: 2 (lower is better)
Translates to: PLLLPAGLSATFHMT*AWSGQRSDRQAPGT
Trigger: TGTCCCAGGGGCCTGTCGGTCACTTCTTTGCCCCGACCAGGCCAATGTCATATGGAAGGTGGCAGAGAGCCCAGCAGGAAGCAGAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCGAACTCCAGCCCGGGTaGCAGAGCCAGACCCTGTCT +
Preference number: 2 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSELQPG*QSQTLS
Trigger: AGACAGGGTCTGGCTCTGTCACCCGGGCTGGAGTTC...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp CCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCATCCGGGCAATGGGGCTaGAGTTCACAATCTCCTTGT +
Preference number: 2 (lower is better)
Translates to: PLWREGKGPTCRRFSRWASGQWG*SSQSPC
Trigger: ACAAGGAGATTGTGAACTTCAGCCCCATTGCCCGGA...TGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373766.9
3UTR-3UTR GCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCCACCTGCAGTCCTGGTaGACCTGGGTGGCACAGACC +
Preference number: 2 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSHLQSW*TWVAQT
Trigger: GGTCTGTGCCACCCAGGTGCACCAGGACTGCAGGTG...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp GCAGCTGCCCAGCTGAGCAGGGACCCCGCAGGAGGAACCAGAGCAGGAGAATCCTTTCAATGTGCCAAGTaGAAGTTGAGCCATGCCCTC +
Preference number: 2 (lower is better)
Translates to: AAAQLSRDPAGGTRAGESFQCAK*KLSHAL
Trigger: GAGGGCATGGCTCAACTTTCACTTGGCACATTGAAA...GGATTCTCCTGCTCTGGTTCCTCCTGCGGGGTCCCTGCTCAGCTGGGCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCAGCAAGAGCCCATTTCTaGCTGTGCAGCTCGCAGTCT +
Preference number: 2 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPARAHF*LCSSQS
Trigger: AGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGC...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GCAGCTGCCCAGCTGAGCAGGGACCCCGCAGGAGGAACCAGAGCAGGAGAATCCATGGGCAGTTTAACGTaGCCTGTTAGGATCAGAGCT +
Preference number: 2 (lower is better)
Translates to: AAAQLSRDPAGGTRAGESMGSLT*PVRIRA
Trigger: AGCTCTGATCCTAACAGGCCACGTTAAACTGCCCAT...GGATTCTCCTGCTCTGGTTCCTCCTGCGGGGTCCCTGCTCAGCTGGGCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGAGGCTGGGCAACCCTTaGATCCAAGCTGGGTACAGT +
Preference number: 2 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKRLGNP*IQAGYS
Trigger: ACTGTACCCAGCTTGGATTCAAGGGTTGCCCAGCCT...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTACGCCAGGCAAGCCCTaGCCTGGGACACCGCTGCTG +
Preference number: 2 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGTPGKP*PGTPLL
Trigger: CAGCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGT...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCTCCTTGGGCAGTGTCTaGCCGGCGGTGCCATGCAAG +
Preference number: 2 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFSLGSV*PAVPCK
Trigger: CTTGCATGGCACCGCCGGCCAGACACTGCCCAAGGA...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp TGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTCTCCGAGTCAGGTCAAAGCTCTaGAGAGCTGTGCCATCTCCC +
Preference number: 2 (lower is better)
Translates to: CHQARQEPISACAARSLRVRSKL*RAVPSP
Trigger: GGGAGATGGCACAGCTCTCCAGAGCTTTGACCTGAC...TCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 90 bp AAAGCTCTGGAGAGCTGTGCCATCTCCCAAAGGGAGCAGAACGGTTaGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCG +
Preference number: 2 (lower is better)
Translates to: KALESCAISQREQNG*PSSQARAHFCLCSS
Trigger: CGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCAAACCGTTCTGCTCCCTTTGGGAGATGGCACAGCTCTCCAGAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 90 bp GCTGTGGCAAGACTAGCCAGTCCCAGTCAAGGACTCCCCAGCTCCTaGACAGCAGGGCCATTCTGTGGGAGAGAAAACAGAGACCATGGA +
Preference number: 2 (lower is better)
Translates to: AVARLASPSQGLPSS*TAGPFCGRENRDHG
Trigger: TCCATGGTCTCTGTTTTCTCTCCCACAGAATGGCCCTGCTGTCAAGGAGCTGGGGAGTCCTTGACTGGGACTGGCTAGTCTTGCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTGTCGGGGCAAAGAAGTaGCCGACAGGCCCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLVGAKK*PTGPWD
Trigger: GTCCCAGGGGCCTGTCGGTCACTTCTTTGCCCCGAC...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCCTGCCACCTTCCATATaGCATTGGCCTGGTCGGGGC +
Preference number: 2 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFLPPSI*HWPGRG
Trigger: GCCCCGACCAGGCCAATGTCATATGGAAGGTGGCAG...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGCCCACCTTGCACTGCTaGGCACCTCCACCGCCTTTT +
Preference number: 2 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLPTLHC*APPPPF
Trigger: AAAAGGCGGTGGAGGTGCTCAGCAGTGCAAGGTGGG...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCGTCAGGTCAAAGCTCTaGAGAGCTGTGCCATCTCCC +
Preference number: 2 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSVRSKL*RAVPSP
Trigger: GGGAGATGGCACAGCTCTCCAGAGCTTTGACCTGAC...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGCTGAGTCACAAGCCCTaGGGTGGGGCCCAGGAATCT +
Preference number: 2 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLLSHKP*GGAQES
Trigger: AGATTCCTGGGCCCCACCCCAGGGCTTGTGACTCAG...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCGTGCACAAGGAAATTTaGGACCCACTGTGCCCGACA +
Preference number: 2 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSVHKEI*DPLCPT
Trigger: TGTCGGGCACAGTGGGTCTCAAATTTCCTTGTGCAC...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCAAGGGACCACAGCCCTaGCAACACCTCCATCCCAGA +
Preference number: 2 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFKGPQP*QHLHPR
Trigger: TCTGGGATGGAGGTGTTGGCAGGGCTGTGGTCCCTT...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCACCAAGCTGGGTACAGTaGTCAAGCCTACTTGGGTTC +
Preference number: 2 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPAPSWVQ*SSLLGF
Trigger: GAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTGG...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTTGTCTCCCCTTGTGCTaGCCCTCACTGGGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGCLPLC*PSLGAA
Trigger: TGCTGCCCCCAGTGAGGGGCAGCACAAGGGGAGACA...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCACAAATACTGGTCCTTaGGCAGTGTCTGGCCGGCGG +
Preference number: 2 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFTNTGP*AVSGRR
Trigger: CCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGT...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp TCTCTCTGCAACTCCCTTAATTTAGCAGCCAAACACATTGGGTTCCTTCACAGACATAGGCCCCCGGCCTaGCTCAGCGCCCACTCAGCC +
Preference number: 2 (lower is better)
Translates to: SLCNSLNLAAKHIGFLHRHRPPA*LSAHSA
Trigger: GGCTGAGTGGGCGCTGAGCCAGGCCGGGGGCCTATG...TCTGTGAAGGAACCCAATGTGTTTGGCTGCTAAATTAAGGGAGTTGCAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCGCCTCCCGAGTAGTTTaGGATTACAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSASRVV*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAAACTACTCGGGAGGC...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp CATTCATCCACTGTGAGTTTCTCGTGTTCTAAGGAATCATCAAACGGCTGCTGGGGAGAGCCCGCCCTCTaGGATACGCTGAGAGGCCCC +
Preference number: 2 (lower is better)
Translates to: HSSTVSFSCSKESSNGCWGEPAL*DTLRGP
Trigger: GGGGCCTCTCAGCGTATCCCAGAGGGCGGGCTCTCC...CCAGCAGCCGTTTGATGATTCCTTAGAACACGAGAAACTCACAGTGGATGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
3UTR-3UTR GCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTGCCCATTTCTGCCTGTaGAGCTCGCAGTCTCCGAGC +
Preference number: 2 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLAHFCL*SSQSPS
Trigger: GCTCGGAGACTGCGAGCTGCACAGGCAGAAATGGGC...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGGTGCCCGACAGCTTGTaGACATGGAAATTTGTTCTG +
Preference number: 2 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKVPDSL*TWKFVL
Trigger: CAGAACAAATTTCCATGTGCACAAGCTGTCGGGCAC...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTCCTGGTGCACCTGGGTaGCACAGACCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGPGAPG*HRPVVP
Trigger: TGGGACTACAGGTCTGTGCCACCCAGGTGCACCAGG...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGGCCTCCCGAGTAGTTTaGGATTACAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRASRVV*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAAACTACTCGGGAGGC...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCGTAAGGGTCTCAGACTaGCGTGAAGAGGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFVRVSD*REEGRL
Trigger: CAGCCTTCCCTCTTCACGCCAGTCTGAGACCCTTAC...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCAGCTAGACTTTTTCCTTaGGGCAGTGAGAATTCTCAG +
Preference number: 2 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPARLFP*GSENSQ
Trigger: CTGAGAATTCTCACTGCCCCAAGGAAAAAGTCTAGC...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 90 bp TGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTaGGGCAGTGTCTGGCCGGCGGTGCCATGCAAGATGAGTCCCTAC +
Preference number: 2 (lower is better)
Translates to: CIPRRAEFGSDKYWS*GSVWPAVPCKMSPY
Trigger: GTAGGGACTCATCTTGCATGGCACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
3UTR-3UTR TCA 90 bp TGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTCTCCGACTGTCTGTAGTGAGTTaGATCATTTCCCCCTGGAAT +
Preference number: 2 (lower is better)
Translates to: CHQARQEPISACAARSLRLSVVS*IISPWN
Trigger: ATTCCAGGGGGAAATGATTCAACTCACTACAGACAG...TCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTAAGGGACCACAGCCCTaGCAACACCTCCATCCCAGA +
Preference number: 2 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGKGPQP*QHLHPR
Trigger: TCTGGGATGGAGGTGTTGGCAGGGCTGTGGTCCCTT...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCATGGGCAGTTTAACGTaGCCTGTTAGGATCAGAGCT +
Preference number: 2 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSMGSLT*PVRIRA
Trigger: AGCTCTGATCCTAACAGGCCACGTTAAACTGCCCAT...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCGTGAAGAGGGAAGGCTaGGCAACCCTTGAATCCAAG +
Preference number: 2 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFVKREG*ATLESK
Trigger: CTTGGATTCAAGGGTTGCCCAGCCTTCCCTCTTCAC...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCCTTCTGTCCTCTGCTTaGAAGGCTGTATTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSLLSSA*KAVFQE
Trigger: TTCTTGGAATACAGCCTTTCAAGCAGAGGACAGAAG...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCATCTCGAACTATGGTCTaGTATCCATCAGAATCACTA +
Preference number: 2 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPSRTMV*YPSESL
Trigger: TAGTGATTCTGATGGATATCAGACCATAGTTCGAGA...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGCCTCCTATAGGTTTTTaGTTTAGGCCTCCCAACAAA +
Preference number: 2 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKPPIGF*FRPPNK
Trigger: TTTGTTGGGAGGCCTAAATCAAAAACCTATAGGAGG...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGCTCTGTGGGAGGGGCTaGGGTTTAATTCCGGAGTGG +
Preference number: 2 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMLCGRG*GLIPEW
Trigger: CCACTCCGGAATTAAACCTCAGCCCCTCCCACAGAG...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCTCCATTCATCCACTGTaGGTTTCTCGTGTTCTAAGG +
Preference number: 2 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSSIHPL*VSRVLR
Trigger: CCTTAGAACACGAGAAACTCACAGTGGATGAATGGA...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373766.9
3UTR-3UTR GCA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGGACCCTTCTGTCCTCTaGTTGAAAGGCTGTATTCCA +
Preference number: 2 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRDPSVL*LKGCIP
Trigger: TGGAATACAGCCTTTCAAGCAGAGGACAGAAGGGTC...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCAGCTCCGGGCACCCGTaGACACTGGGTTCACCCTTA +
Preference number: 2 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMASSGHP*TLGSPL
Trigger: TAAGGGTGAACCCAGTGTGCACGGGTGCCCGGAGCT...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCCCCTGGCACCACCCTTaGTCCAGTACACACCCATGG +
Preference number: 2 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMAPWHHP*SSTHPW
Trigger: CCATGGGTGTGTACTGGAGCAAGGGTGGTGCCAGGG...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGCTTAAAAATGCTGTCTaGGCCTGCAGGGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLLKNAV*ACRVAH
Trigger: ATGAGCCACCCTGCAGGCCCAGACAGCATTTTTAAG...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGTGGAACCTGAGAATGTaGCTTTATTTGGAACTAGAG +
Preference number: 2 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKWNLRM*LYLELE
Trigger: CTCTAGTTCCAAATAAAGTCACATTCTCAGGTTCCA...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCTCACCCAAAATAACCTaGATGCAATCGCACCAGCTG +
Preference number: 2 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFSPKIT*MQSHQL
Trigger: CAGCTGGTGCGATTGCATTCAGGTTATTTTGGGTGA...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCCTCTGTGGGAGGGGCTaGGGTTTAATTCCGGAGTGG +
Preference number: 2 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMALCGRG*GLIPEW
Trigger: CCACTCCGGAATTAAACCTCAGCCCCTCCCACAGAG...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp CTCAAGGAGAAAGAAGCACCCAGGAGACAATGCCCACCAAGAAGGAGGTGGCAGTCCATTCATCCACTGTaGGTTTCTCGTGTTCTAAGG +
Preference number: 2 (lower is better)
Translates to: LKEKEAPRRQCPPRRRWQSIHPL*VSRVLR
Trigger: CCTTAGAACACGAGAAACTCACAGTGGATGAATGGA...CTGCCACCTCCTTCTTGGTGGGCATTGTCTCCTGGGTGCTTCTTTCTCCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373759.1
3UTR-3UTR GCA 90 bp TCTCTCTGCAACTCCCTTAATTTAGCAGCCAAACACATTGGGTTCCTTCACAGAGGAAAGGGCCCCACCTaGAGGCGATTCTCCAGATGG +
Preference number: 2 (lower is better)
Translates to: SLCNSLNLAAKHIGFLHRGKGPT*RRFSRW
Trigger: CCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCC...TCTGTGAAGGAACCCAATGTGTTTGGCTGCTAAATTAAGGGAGTTGCAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTATTACACAGGCCATGTaGCCACTGGGCAAGACCCAA +
Preference number: 2 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLITQAM*PLGKTQ
Trigger: TTGGGTCTTGCCCAGTGGGCACATGGCCTGTGTAAT...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGCACACAGGATTAGGGTaGGCCCTAAATCCAATGACT +
Preference number: 2 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLHTGLG*ALNPMT
Trigger: AGTCATTGGATTTAGGGCCCACCCTAATCCTGTGTG...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGCAAATCAAGTATGACTaGAATCCACTAAATGTCTCG +
Preference number: 2 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKQIKYD*NPLNVS
Trigger: CGAGACATTTAGTGGATTTCAGTCATACTTGATTTG...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGCCTCCTATAGGTTTTTaGTTTAGGCCTCCCAACAAA +
Preference number: 2 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRPPIGF*FRPPNK
Trigger: TTTGTTGGGAGGCCTAAATCAAAAACCTATAGGAGG...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTTCCTGCTGGGCTCTCTaGCACCTTCCATATGACATT +
Preference number: 2 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLSCWAL*HLPYDI
Trigger: AATGTCATATGGAAGGTGGCAGAGAGCCCAGCAGGA...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAACAAATACTGGTCCTTaGGCAGTGTCTGGCCGGCGG +
Preference number: 2 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKTNTGP*AVSGRR
Trigger: CCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGT...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTCTTAAAAATGCTGTCTaGGCCTGCAGGGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGLKNAV*ACRVAH
Trigger: ATGAGCCACCCTGCAGGCCCAGACAGCATTTTTAAG...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCGGTATTTGCTCACAGTaGGCAATGGGAAGGGGAGGC +
Preference number: 2 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMAGICSQ*AMGRGG
Trigger: GCCTCCCCTTCCCATTGCCCACTGTGAGCAAATACC...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGCCTGTGAATGCAGAATaGACCTTACGGTGGATCCCA +
Preference number: 2 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMPVNAE*TLRWIP
Trigger: TGGGATCCACCGTAAGGTTCATTCTGCATTCACAGG...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGCCTTTAACCTGTGAATaGAGAATGAACCTTACGGTG +
Preference number: 2 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLPLTCE*RMNLTV
Trigger: CACCGTAAGGTTCATTCTGCATTCACAGGTTAAAGG...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp ACTAGGCTTGGGTCAGGGCGAGAGGTCCTCATTCAAATGCACATTCTAAGGTCTAGCAGCCAAACACATTaGGTTCCTTCACAGAGCACA +
Preference number: 2 (lower is better)
Translates to: TRLGSGREVLIQMHILRSSSQTH*VPSQST
Trigger: TGTGCTCTGTGAAGGAACCCAATGTGTTTGGCTGCT...AGACCTTAGAATGTGCATTTGAATGAGGACCTCTCGCCCTGACCCAAGCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCGGTTTAATTCCGGAGTaGGGATGGCCTAGGAGGACA +
Preference number: 2 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMAGLIPE*GWPRRT
Trigger: TGTCCTCCTAGGCCATCCCCACTCCGGAATTAAACC...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAATCATCAAACGGCTGCTaGGCCTCCGTCTCTTCCTCA +
Preference number: 2 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKSSNGC*ASVSSS
Trigger: TGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGA...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
3UTR CAA 90 bp ACGTGGCCTGTTAGGATCAGAGCTAGTTTCTCCCAACCGACATCTTaGAATTCTGCATCTACTAGGCCCATTTCCCACATAAGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: TWPVRIRASFSQPTS*NSASTRPISHIRRR
Trigger: CCTTCTCCTTATGTGGGAAATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCTGATCCTAACAGGCCACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTGAAACTTCACAGATTTaGGAAAACTCTGTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLETSQI*ENSVGG
Trigger: CCCTCCCACAGAGTTTTCTCAAATCTGTGAAGTTTC...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp ACTAGGCTTGGGTCAGGGCGAGAGGTCCTCATTCAAATGCACATTCTAAGGTCTAGCTGCAGCTCTCTCTaGAACTCCCTTAATTTAGCA +
Preference number: 2 (lower is better)
Translates to: TRLGSGREVLIQMHILRSSCSSL*NSLNLA
Trigger: TGCTAAATTAAGGGAGTTGCAGAGAGAGCTGCAGCT...AGACCTTAGAATGTGCATTTGAATGAGGACCTCTCGCCCTGACCCAAGCCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp CAAGCTGGGTACAGTGCTCAAGCCTACTTGGGTTCCAATCTGACTCCACCACTTGACAGCTTGTGCACATaGAAATTTGTTCTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: QAGYSAQAYLGSNLTPPLDSLCT*KFVLPK
Trigger: CTTTGGCAGAACAAATTTCCATGTGCACAAGCTGTC...AAGTGGTGGAGTCAGATTGGAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCCCCAACCGACATCTTTaGATTCTGCATCTACTAGGC +
Preference number: 2 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMAPNRHL*ILHLLG
Trigger: GCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGG...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp AAACAGAGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGTGGAACCTGAGAATGTaGCTTTATTTGGAACTAGAG +
Preference number: 2 (lower is better)
Translates to: KQRPWTQSAVRVSDWREEWNLRM*LYLELE
Trigger: CTCTAGTTCCAAATAAAGTCACATTCTCAGGTTCCA...CTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCTCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCGACCCTTCTGTCCTCTaGTTGAAAGGCTGTATTCCA +
Preference number: 2 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMADPSVL*LKGCIP
Trigger: TGGAATACAGCCTTTCAAGCAGAGGACAGAAGGGTC...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp CCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATAACCTGAATGCCCATTTCTGCCTGTaGAGCTCGCAGTCTCCGAGC +
Preference number: 2 (lower is better)
Translates to: PAVVSYLDCLSLTQNNLNAHFCL*SSQSPS
Trigger: GCTCGGAGACTGCGAGCTGCACAGGCAGAAATGGGC...ATTCAGGTTATTTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCGCTGTTGGGAGAAAATaGGTCCTGCGGTTAAGTACA +
Preference number: 2 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMAAVGRK*VLRLST
Trigger: TGTACTTAACCGCAGGACCCATTTTCTCCCAACAGC...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGCCCACAGCAGGAGAATaGACTTGTTTCCTATTACAC +
Preference number: 2 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMPTAGE*TCFLLH
Trigger: GTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGG...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCTCCAGTACACACCCATaGGTGCTCAATGAAGAAGTG +
Preference number: 2 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMASSTHP*VLNEEV
Trigger: CACTTCTTCATTGAGCACCCATGGGTGTGTACTGGA...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR TCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCACCTCCACCGCCTTTTaGAGAAACTTCACAGATTTG +
Preference number: 2 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMATSTAF*RNFTDL
Trigger: CAAATCTGTGAAGTTTCTTCAAAAGGCGGTGGAGGT...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGAGCTATAGCATTGCTTaGGGCCATGGAAAAACAGTT +
Preference number: 2 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMSYSIA*GHGKTV
Trigger: AACTGTTTTTCCATGGCCCCAAGCAATGCTATAGCT...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR GCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTACAGATGGTAACAAATaGACAATAGGTATCCACCAT +
Preference number: 2 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGTDGNK*TIGIHH
Trigger: ATGGTGGATACCTATTGTGCATTTGTTACCATCTGT...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 90 bp GGAAGTTCTGGATTAAATGAGGAACGGATCTCTTTACTGCAGGACTaGTCAAGACCTTTAACCTGTGAATGCAGAATGAACCTTACGGTG +
Preference number: 2 (lower is better)
Translates to: GSSGLNEERISLLQD*SRPLTCECRMNLTV
Trigger: CACCGTAAGGTTCATTCTGCATTCACAGGTTAAAGGTCTTGACAAGTCCTGCAGTAAAGAGATCCGTTCCTCATTTAATCCAGAACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 72 bp AAACCAACACAGCATCACTGCCATAGGCCCCCGGCCTaGCTCAGCGCCCACTCAGCCCCACTCTGGCGGGAA +
Preference number: 3 (lower is better)
Translates to: KPTQHHCHRPPA*LSAHSAPLWRE
Trigger: TTCCCGCCAGAGTGGGGCTGAGTGGGCGCTGAGCCAGGCCGGGGGCCTATGGCAGTGATGCTGTGTTGGTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 72 bp AGCCTCACGCAGGCAGCTCCGGGCACCCGTGCACACTaGGTTCACCCTTACGGAGCTGTTCCTCCATCAGGC +
Preference number: 3 (lower is better)
Translates to: SLTQAAPGTRAH*VHPYGAVPPSG
Trigger: GCCTGATGGAGGAACAGCTCCGTAAGGGTGAACCCAGTGTGCACGGGTGCCCGGAGCTGCCTGCGTGAGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 72 bp GGGACCCCGCAGGAGGAACCAGAGCAGGAGAATCCCTaGCACCACCCTTGCTCCAGTACACACCCATGGGTG +
Preference number: 3 (lower is better)
Translates to: GTPQEEPEQENP*HHPCSSTHPWV
Trigger: CACCCATGGGTGTGTACTGGAGCAAGGGTGGTGCCAGGGATTCTCCTGCTCTGGTTCCTCCTGCGGGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 72 bp GCTGGGCTCTCTGCCACCTTCCATATGACATTGGCCTaGTCGGGGCAAAGAAGTGACCGACAGGCCCCTGGG +
Preference number: 3 (lower is better)
Translates to: AGLSATFHMTLA*SGQRSDRQAPG
Trigger: CCCAGGGGCCTGTCGGTCACTTCTTTGCCCCGACCAGGCCAATGTCATATGGAAGGTGGCAGAGAGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCTCCCAACCGACATCTTaGAATTCTGCATCTACTAGG +
Preference number: 3 (lower is better)
Translates to: GQHHPNPRQASPALGHRCSQPTS*NSASTR
Trigger: CCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGA...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 72 bp AATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTaGTGTCTGTTTTCATGGATGACTCAGGCCCCAGCA +
Preference number: 3 (lower is better)
Translates to: NPRQASPALGHR*CLFSWMTQAPA
Trigger: TGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 72 bp AGGTACAGCCCAGGGCCGCCCACTTCTGCTTCCTGCTaGGCTCTCTGCCACCTTCCATATGACATTGGCCTG +
Preference number: 3 (lower is better)
Translates to: RYSPGPPTSASC*ALCHLPYDIGL
Trigger: CAGGCCAATGTCATATGGAAGGTGGCAGAGAGCCCAGCAGGAAGCAGAAGTGGGCGGCCCTGGGCTGTACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGACAAATACTGGTCCTaGGGCAGTGTCTGGCCGGCG +
Preference number: 3 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPADKYWS*GSVWPA
Trigger: CGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTC...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCCAAGAAGGGCTGAGTTaGGTAGTGACAAATACTGGT +
Preference number: 3 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFQEGLS*VVTNTG
Trigger: ACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTG...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCCTGTTGTTTCATATCTaGATTGCTTATCACTCACCC +
Preference number: 3 (lower is better)
Translates to: GQHHPNPRQASPALGHRCLLFHI*IAYHSP
Trigger: GGGTGAGTGATAAGCAATCAAGATATGAAACAACAG...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGTCAGAATCACTAGGCTaGGGTCAGGGCGAGAGGTCC +
Preference number: 3 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKSESLG*GQGERS
Trigger: GGACCTCTCGCCCTGACCCAAGCCTAGTGATTCTGA...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCTCTCCTCAGTTTTCTaGATGAGTAACATCTTGCAT +
Preference number: 3 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLLSSVF*MSNILH
Trigger: ATGCAAGATGTTACTCATCAAGAAAACTGAGGAGAG...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCCAGCAAAGATACTCTTaGTTCCTCAAAAGAGGGAAT +
Preference number: 3 (lower is better)
Translates to: GQHHPNPRQASPALGHRCQQRYS*FLKRGN
Trigger: ATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTG...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR TCA 72 bp CACTCCGGCGCCGTGAGTCCTTCCGGGCAATGGGGCTaGAGTTCACAATCTCCTTGTAGATGTGCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: HSGAVSPSGQWG*SSQSPCRCAAS
Trigger: GGAAGCAGCACATCTACAAGGAGATTGTGAACTTCAGCCCCATTGCCCGGAAGGACTCACGGCGCCGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373766.9
3UTR GCA 72 bp AACGGTTTGCCATCAAGCCAGGCAAGAGCCCATTTCTaGCTGTGCAGCTCGCAGTCTCCGAGCCTGCTGTTG +
Preference number: 3 (lower is better)
Translates to: NGLPSSQARAHF*LCSSQSPSLLL
Trigger: CAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCAAACCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGGACAAATACTGGTCCTaGGGCAGTGTCTGGCCGGCG +
Preference number: 3 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLDKYWS*GSVWPA
Trigger: CGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTC...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGGTGCACAAGGAAATTaGAGACCCACTGTGCCCGAC +
Preference number: 3 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPAGAQGN*RPTVPD
Trigger: GTCGGGCACAGTGGGTCTCAAATTTCCTTGTGCACC...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR TCA 72 bp TTCTGCTTCCTGCTGGGCTCTCTGCCACCTTCCATATaGCATTGGCCTGGTCGGGGCAAAGAAGTGACCGAC +
Preference number: 3 (lower is better)
Translates to: FCFLLGSLPPSI*HWPGRGKEVTD
Trigger: GTCGGTCACTTCTTTGCCCCGACCAGGCCAATGTCATATGGAAGGTGGCAGAGAGCCCAGCAGGAAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 72 bp GATTCTTCCCCAGAGCCTTCAAAGGGACCACAGCCCTaGCAACACCTCCATCCCAGATTTCCAGCCTCCAGA +
Preference number: 3 (lower is better)
Translates to: DSSPEPSKGPQP*QHLHPRFPASR
Trigger: TCTGGAGGCTGGAAATCTGGGATGGAGGTGTTGGCAGGGCTGTGGTCCCTTTGAAGGCTCTGGGGAAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 72 bp AGTCAGCTCAAGGAGAAAGAAGCACCCAGGAGACAATaGCCACCAAGAAGGAGGTGGCAGGTAGGGCTGGCA +
Preference number: 3 (lower is better)
Translates to: SQLKEKEAPRRQ*PPRRRWQVGLA
Trigger: TGCCAGCCCTACCTGCCACCTCCTTCTTGGTGGGCATTGTCTCCTGGGTGCTTCTTTCTCCTTGAGCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373759.1
3UTR CCA 72 bp TGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTaGGCAAGACCCAAACCCGTGGAACCCCCACTCCCT +
Preference number: 3 (lower is better)
Translates to: WTCFLLHRPCAH*ARPKPVEPPLP
Trigger: AGGGAGTGGGGGTTCCACGGGTTTGGGTCTTGCCCAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp CATTCATCCACTGTGAGTTTCTCGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCGGCCGTCAGGCGCTaGTCCACGTCTAGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: HSSTVSFSCSKESSNGCWAAVRR*STSSSS
Trigger: GCTGGAGCTAGACGTGGACAAGCGCCTGACGGCCGC...CCAGCAGCCGTTTGATGATTCCTTAGAACACGAGAAACTCACAGTGGATGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373759.1
3UTR TCA 72 bp TCAGACTGGCGTGAAGAGGGAAGGCTGGGCAACCCTTaGATCCAAGCTGGGTACAGTGCTCAAGCCTACTTG +
Preference number: 3 (lower is better)
Translates to: SDWREEGRLGNP*IQAGYSAQAYL
Trigger: CAAGTAGGCTTGAGCACTGTACCCAGCTTGGATTCAAGGGTTGCCCAGCCTTCCCTCTTCACGCCAGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 72 bp GCAGCAATAAGCTGGGGAATGCCACGGACTGCCCACTaGCGCCACAAGCTAAAAAGAGCCAAGGAAGGATTC +
Preference number: 3 (lower is better)
Translates to: AAISWGMPRTAH*RHKLKRAKEGF
Trigger: GAATCCTTCCTTGGCTCTTTTTAGCTTGTGGCGGCAGTGGGCAGTCCGTGGCATTCCCCAGCTTATTGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 72 bp TTGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTaGAGCTCGCAGTCTCCGAGCCTGCTGTTGTTTCAT +
Preference number: 3 (lower is better)
Translates to: LPSSQARAHFCL*SSQSPSLLLFH
Trigger: ATGAAACAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 72 bp AGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTaGCCACTGGGCAAGACCCAAACCCGTGGAACCCCC +
Preference number: 3 (lower is better)
Translates to: RRMDLFPITQAM*PLGKTQTRGTP
Trigger: GGGGGTTCCACGGGTTTGGGTCTTGCCCAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 72 bp GAGGAACCAGAGCAGGAGAATCCCTGGCACCACCCTTaGTCCAGTACACACCCATGGGTGCTCAATGAAGAA +
Preference number: 3 (lower is better)
Translates to: EEPEQENPWHHP*SSTHPWVLNEE
Trigger: TTCTTCATTGAGCACCCATGGGTGTGTACTGGAGCAAGGGTGGTGCCAGGGATTCTCCTGCTCTGGTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 72 bp GTGAGTTTCTCGTGTTCTAAGGAATCATCAAACGGCTaGTGGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAG +
Preference number: 3 (lower is better)
Translates to: VSFSCSKESSNG*WASVSSSGSRK
Trigger: CTTCCGGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACGAGAAACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373759.1
ENST00000373766.9
3UTR CCA 72 bp ATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTaGTCCTTGGGCAGTGTCTGGCCGGCGGTGCCATGC +
Preference number: 3 (lower is better)
Translates to: IPRRAEFGSDKY*SLGSVWPAVPC
Trigger: GCATGGCACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 72 bp AGTTTCTCGTGTTCTAAGGAATCATCAAACGGCTGCTaGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGT +
Preference number: 3 (lower is better)
Translates to: SFSCSKESSNGC*ASVSSSGSRKG
Trigger: ACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACGAGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373759.1
ENST00000373766.9
3UTR CCA 72 bp TTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTaGCCGGCGGTGCCATGCAAGATGAGTCCCTACAGC +
Preference number: 3 (lower is better)
Translates to: FGSDKYWSLGSV*PAVPCKMSPYS
Trigger: GCTGTAGGGACTCATCTTGCATGGCACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
3UTR-3UTR CAA 90 bp TGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTCTCCGACCTTCTGTCCTCTGCTaGAAAGGCTGTATTCCAAGA +
Preference number: 3 (lower is better)
Translates to: CHQARQEPISACAARSLRPSVLC*KGCIPR
Trigger: TCTTGGAATACAGCCTTTCAAGCAGAGGACAGAAGG...TCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp AAACAGAGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGTCAGAATCACTAGGCTaGGGTCAGGGCGAGAGGTCC +
Preference number: 3 (lower is better)
Translates to: KQRPWTQSAVRVSDWREESESLG*GQGERS
Trigger: GGACCTCTCGCCCTGACCCAAGCCTAGTGATTCTGA...CTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCAAGGCTGGGCAACCCTaGAATCCAAGCTGGGTACAG +
Preference number: 3 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFKAGQP*NPSWVQ
Trigger: CTGTACCCAGCTTGGATTCAAGGGTTGCCCAGCCTT...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 72 bp CACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACGTaGCCTGTTAGGATCAGAGCTAGTTTCTCCCAACCG +
Preference number: 3 (lower is better)
Translates to: HLQAILQMGSLT*PVRIRASFSQP
Trigger: CGGTTGGGAGAAACTAGCTCTGATCCTAACAGGCCACGTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 72 bp AGCCCTGCCCTGGGACACCGCTGCTGTCTGTTTTCATaGATGACTCAGGCCCCAGCAAAGATACTCTTTGTT +
Preference number: 3 (lower is better)
Translates to: SPALGHRCCLFS*MTQAPAKILFV
Trigger: AACAAAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGTCCCAGGGCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR TCA 72 bp CTTCCATATGACATTGGCCTGGTCGGGGCAAAGAAGTaGCCGACAGGCCCCTGGGACATCTTTCACTCATTA +
Preference number: 3 (lower is better)
Translates to: LPYDIGLVGAKK*PTGPWDIFHSL
Trigger: TAATGAGTGAAAGATGTCCCAGGGGCCTGTCGGTCACTTCTTTGCCCCGACCAGGCCAATGTCATATGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCACAAGAAGGGCTGAGTTaGGTAGTGACAAATACTGGT +
Preference number: 3 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPAQEGLS*VVTNTG
Trigger: ACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTG...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTAAGGCTGGGCAACCCTaGAATCCAAGCTGGGTACAG +
Preference number: 3 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGKAGQP*NPSWVQ
Trigger: CTGTACCCAGCTTGGATTCAAGGGTTGCCCAGCCTT...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGGAAGGCCAAGCCTACTaGGGGAGAGGCAATATCGGG +
Preference number: 3 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMEGQAY*GRGNIG
Trigger: CCCGATATTGCCTCTCCCCAAGTAGGCTTGGCCTTC...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGAGGGAGCAGAACGGTTaGCCATCAAGCCAGGCAAGA +
Preference number: 3 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMREQNG*PSSQAR
Trigger: TCTTGCCTGGCTTGATGGCAAACCGTTCTGCTCCCT...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGACTGTGCCCGACAGCTaGTGCACATGGAAATTTGTT +
Preference number: 3 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLTVPDS*CTWKFV
Trigger: AACAAATTTCCATGTGCACAAGCTGTCGGGCACAGT...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGGGTGCACAAGGAAATTaGAGACCCACTGTGCCCGAC +
Preference number: 3 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMGAQGN*RPTVPD
Trigger: GTCGGGCACAGTGGGTCTCAAATTTCCTTGTGCACC...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTACCTTCCATATGACATaGGCCTGGTCGGGGCAAAGA +
Preference number: 3 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLTFHMT*AWSGQR
Trigger: TCTTTGCCCCGACCAGGCCAATGTCATATGGAAGGT...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR TCA 72 bp CCACCCTTGCTCCAGTACACACCCATGGGTGCTCAATaGAGAAGTGAGGACAACTTGCTGCCATCTTCAGTT +
Preference number: 3 (lower is better)
Translates to: PPLLQYTPMGAQ*RSEDNLLPSSV
Trigger: AACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAGCACCCATGGGTGTGTACTGGAGCAAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 72 bp TTCATTCACGCACAGGTATTTGCTCACAGTGGGCAATaGGAAGGGGAGGCCAAACCACACACTAAATGCTGC +
Preference number: 3 (lower is better)
Translates to: FIHAQVFAHSGQ*EGEAKPHTKCC
Trigger: GCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATTGCCCACTGTGAGCAAATACCTGTGCGTGAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCAAGTCCATAGTTTACTaGAGGGTTCACTCTGTGTTA +
Preference number: 3 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSKSIVY*RVHSVL
Trigger: TAACACAGAGTGAACCCTCAAGTAAACTATGGACTT...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR TCA 72 bp TGCATTTTAACAAGTCCCCTGGTGCACAAGGAAATTTaGGACCCACTGTGCCCGACAGCTTGTGCACATGGA +
Preference number: 3 (lower is better)
Translates to: CILTSPLVHKEI*DPLCPTACAHG
Trigger: TCCATGTGCACAAGCTGTCGGGCACAGTGGGTCTCAAATTTCCTTGTGCACCAGGGGACTTGTTAAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 72 bp CCATGGGTGCTCAATGAAGAAGTGAGGACAACTTGCTaGCATCTTCAGTTTGATGGAATGGCCTTAGGCCTC +
Preference number: 3 (lower is better)
Translates to: PWVLNEEVRTTC*HLQFDGMALGL
Trigger: GAGGCCTAAGGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAGCACCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 72 bp CACCCATGGGTGCTCAATGAAGAAGTGAGGACAACTTaGTGCCATCTTCAGTTTGATGGAATGGCCTTAGGC +
Preference number: 3 (lower is better)
Translates to: HPWVLNEEVRTT*CHLQFDGMALG
Trigger: GCCTAAGGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAGCACCCATGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 72 bp GATTCCTCCCTCCTCAGCTGTAGCTATAGCATTGCTTaGGGCCATGGAAAAACAGTTTTCCACACCCTAGCA +
Preference number: 3 (lower is better)
Translates to: DSSLLSCSYSIA*GHGKTVFHTLA
Trigger: TGCTAGGGTGTGGAAAACTGTTTTTCCATGGCCCCAAGCAATGCTATAGCTACAGCTGAGGAGGGAGGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp AAACAGAGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGTCTCCGAGCCTGCTGTaGTTTCATATCTTGATTGCT +
Preference number: 3 (lower is better)
Translates to: KQRPWTQSAVRVSDWREESPSLL*FHILIA
Trigger: AGCAATCAAGATATGAAACAACAGCAGGCTCGGAGA...CTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCTCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGCTCTCCTCAGTTTTCTaGATGAGTAACATCTTGCAT +
Preference number: 3 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRLSSVF*MSNILH
Trigger: ATGCAAGATGTTACTCATCAAGAAAACTGAGGAGAG...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGAGAACACAAGGGGTTTaGAATGCCAGGCCAAGAAGG +
Preference number: 3 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMRTQGV*NARPRR
Trigger: CCTTCTTGGCCTGGCATTCAAAACCCCTTGTGTTCT...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCACCTTCCATATGACATaGGCCTGGTCGGGGCAAAGA +
Preference number: 3 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMATFHMT*AWSGQR
Trigger: TCTTTGCCCCGACCAGGCCAATGTCATATGGAAGGT...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR TCA 72 bp TCCCACATAAGGAGAAGGACCCTTCTGTCCTCTGCTTaGAAGGCTGTATTCCAAGAAGGGCTGAGTTTGGTA +
Preference number: 3 (lower is better)
Translates to: SHIRRRTLLSSA*KAVFQEGLSLV
Trigger: TACCAAACTCAGCCCTTCTTGGAATACAGCCTTTCAAGCAGAGGACAGAAGGGTCCTTCTCCTTATGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR TCA 72 bp GCTCCAGTACACACCCATGGGTGCTCAATGAAGAAGTaGGGACAACTTGCTGCCATCTTCAGTTTGATGGAA +
Preference number: 3 (lower is better)
Translates to: APVHTHGCSMKK*GQLAAIFSLME
Trigger: TTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAGCACCCATGGGTGTGTACTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTCACCTCCACCGCCTTTaGAAGAAACTTCACAGATTT +
Preference number: 3 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGHLHRL*KKLHRF
Trigger: AAATCTGTGAAGTTTCTTCAAAAGGCGGTGGAGGTG...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 72 bp TTACTGCAGGACTTGTCAAGACCTTTAACCTGTGAATaGAGAATGAACCTTACGGTGGATCCCAGGACTGGT +
Preference number: 3 (lower is better)
Translates to: LLQDLSRPLTCE*RMNLTVDPRTG
Trigger: ACCAGTCCTGGGATCCACCGTAAGGTTCATTCTGCATTCACAGGTTAAAGGTCTTGACAAGTCCTGCAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 72 bp CCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATaGAGGGTACACTTGCTCTTAGGAAATGTCCCCCAC +
Preference number: 3 (lower is better)
Translates to: PAKILFVPQKRE*RVHLLLGNVPH
Trigger: GTGGGGGACATTTCCTAAGAGCAAGTGTACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCTCCCAACCGACATCTTaGAATTCTGCATCTACTAGG +
Preference number: 3 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMASQPTS*NSASTR
Trigger: CCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGA...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR GCA 72 bp CAAGGAAATTTGAGACCCACTGTGCCCGACAGCTTGTaGACATGGAAATTTGTTCTGCCAAAGTTTCTCAGA +
Preference number: 3 (lower is better)
Translates to: QGNLRPTVPDSL*TWKFVLPKFLR
Trigger: TCTGAGAAACTTTGGCAGAACAAATTTCCATGTGCACAAGCTGTCGGGCACAGTGGGTCTCAAATTTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CCA 72 bp CACTTGCTCTTAGGAAATGTCCCCCACCTTGCAGTCTaGCTTCCTGATCTCTCTCTGTTAAGATCTTTTAAG +
Preference number: 3 (lower is better)
Translates to: HLLLGNVPHLAV*LPDLSLLRSFK
Trigger: CTTAAAAGATCTTAACAGAGAGAGATCAGGAAGCCAGACTGCAAGGTGGGGGACATTTCCTAAGAGCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR TCA 72 bp CATATCTTGATTGCTTATCACTCACCCAAAATAACCTaGATGCAATCGCACCAGCTGCAGCTCTCTCTGCAA +
Preference number: 3 (lower is better)
Translates to: HILIAYHSPKIT*MQSHQLQLSLQ
Trigger: TTGCAGAGAGAGCTGCAGCTGGTGCGATTGCATTCAGGTTATTTTGGGTGAGTGATAAGCAATCAAGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR TCA 72 bp CTGCGGTTAAGTACATCTGGGAAGTTCTGGATTAAATaGGGAACGGATCTCTTTACTGCAGGACTTGTCAAG +
Preference number: 3 (lower is better)
Translates to: LRLSTSGKFWIK*GTDLFTAGLVK
Trigger: CTTGACAAGTCCTGCAGTAAAGAGATCCGTTCCTCATTTAATCCAGAACTTCCCAGATGTACTTAACCGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR-3UTR CAA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCAAGTCCATAGTTTACTaGAGGGTTCACTCTGTGTTA +
Preference number: 3 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMAKSIVY*RVHSVL
Trigger: TAACACAGAGTGAACCCTCAAGTAAACTATGGACTT...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCCTCACACCAGGGGCTGGGAGAGCCCGCCCTCTGGGATACGCTGAGAGGCCCCCTGGGGAGCGGGCTCTaGGACTCACCCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASHQGLGEPALWDTLRGPLGSGL*DSPWGL
Trigger: CAGCCCCCAGGGTGAGTCTCAGAGCCCGCTCCCCAG...GGGGCCTCTCAGCGTATCCCAGAGGGCGGGCTCTCCCAGCCCCTGGTGTGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR TCA 90 bp GCCTCACACCAGGGGCTGGGAGAGCCCGCCCTCTGGGATACGCTGAGAGGCCCCGGCCACCTTCTCCCCTaGCCGCTTGTCGATGGCCGA +
Preference number: 4 (lower is better)
Translates to: ASHQGLGEPALWDTLRGPGHLLP*PLVDGR
Trigger: TCGGCCATCGACAAGCGGTCAGGGGAGAAGGTGGCC...GGGGCCTCTCAGCGTATCCCAGAGGGCGGGCTCTCCCAGCCCCTGGTGTGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR CCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCCACTCAGCCCCACTCTaGCGGGAAGGAAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GQHHPNPRQASPALGHRCHSAPL*REGKGP
Trigger: GGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTG...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GAGAGGCTGCAGGCGGAGGCGAGGAAGCCCGAGGCCCCAGCTCTTACGCTTCCACCTCACACCAGGGGCTaGGAGAGCCCGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ERLQAEARKPEAPALTLPPHTRG*ESPPSG
Trigger: CCCAGAGGGCGGGCTCTCCCAGCCCCTGGTGTGAGG...TGGAAGCGTAAGAGCTGGGGCCTCGGGCTTCCTCGCCTCCGCCTGCAGCCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR TCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGGAACTCCAGCCCGGGTaGCAGAGCCAGACCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLELQPG*QSQTLS
Trigger: AGACAGGGTCTGGCTCTGTCACCCGGGCTGGAGTTC...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCGGCTTCAGGTCCCTGTaGACGACCCCAGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GQHHPNPRQASPALGHRCGFRSL*TTPAEW
Trigger: CCACTCTGCTGGGGTCGTGCACAGGGACCTGAAGCC...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCCTGCCACCTTCCATATaGCATTGGCCTGGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GQHHPNPRQASPALGHRCLPPSI*HWPGRG
Trigger: GCCCCGACCAGGCCAATGTCATATGGAAGGTGGCAG...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCCCCACCTTGCACTGCTaGGCACCTCCACCGCCTTTT +
Preference number: 4 (lower is better)
Translates to: GQHHPNPRQASPALGHRCPTLHC*APPPPF
Trigger: AAAAGGCGGTGGAGGTGCTCAGCAGTGCAAGGTGGG...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCCTGAGTCACAAGCCCTaGGGTGGGGCCCAGGAATCT +
Preference number: 4 (lower is better)
Translates to: GQHHPNPRQASPALGHRCLSHKP*GGAQES
Trigger: AGATTCCTGGGCCCCACCCCAGGGCTTGTGACTCAG...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCAGGCCATGTGCCCACTaGGCAAGACCCAAACCCGTG +
Preference number: 4 (lower is better)
Translates to: GQHHPNPRQASPALGHRCRPCAH*ARPKPV
Trigger: CACGGGTTTGGGTCTTGCCCAGTGGGCACATGGCCT...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCGCGAAGATCTCGGACTaGAAGGGTCGGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GQHHPNPRQASPALGHRCAKISD*KGRLSF
Trigger: GAAGCTGAGCCGACCCTTTCAGTCCGAGATCTTCGC...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCAGCTGCCCAGCTGAGCAGGGACCCCGCAGGAGGAACCAGAGCAGGAGAATCCCAAAGAAGGGATGGGTaGGGGCCTGCGCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: AAAQLSRDPAGGTRAGESQRRDG*GPARPS
Trigger: TGACGGCCGCGCAGGCCCTCACCCATCCCTTCTTTG...GGATTCTCCTGCTCTGGTTCCTCCTGCGGGGTCCCTGCTCAGCTGGGCAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCAGCTGCCCAGCTGAGCAGGGACCCCGCAGGAGGAACCAGAGCAGGAGAATCCGTCGGGGCAAAGAAGTaGCCGACAGGCCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AAAQLSRDPAGGTRAGESVGAKK*PTGPWD
Trigger: GTCCCAGGGGCCTGTCGGTCACTTCTTTGCCCCGAC...GGATTCTCCTGCTCTGGTTCCTCCTGCGGGGTCCCTGCTCAGCTGGGCAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTGTAGTGCATCCAGCTaGGGATCACCTCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFCSASS*GSPRGL
Trigger: GAGCCCCCGAGGTGATCCTCAGCTGGATGCACTACA...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GCCTCACACCAGGGGCTGGGAGAGCCCGCCCTCTGGGATACGCTGAGAGGCCCCGAATCATCAAACGGCTaGTGGGCCTCCGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ASHQGLGEPALWDTLRGPESSNG*WASVSS
Trigger: GGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTC...GGGGCCTCTCAGCGTATCCCAGAGGGCGGGCTCTCCCAGCCCCTGGTGTGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR CCA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACAGCAGGTCCGCAGCCTaGGGGCTGGCCCGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNSRSAA*GLARGN
Trigger: GTTCCCACGGGCCAGCCCCCAGGCTGCGGACCTGCT...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCACATAGGCCCCCGGCCTaGCTCAGCGCCCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPHRPPA*LSAHSA
Trigger: GGCTGAGTGGGCGCTGAGCCAGGCCGGGGGCCTATG...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCCCTGGTGCACCTGGGTaGCACAGACCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFPGAPG*HRPVVP
Trigger: TGGGACTACAGGTCTGTGCCACCCAGGTGCACCAGG...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGTCCGGGCAATGGGGCTaGAGTTCACAATCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLSGQWG*SSQSPC
Trigger: ACAAGGAGATTGTGAACTTCAGCCCCATTGCCCGGA...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAATGGCCAAGAGCCCCTaGCTGAGAGGGGCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PLWREGKGPTCRRFSRWAMAKSP*LRGALL
Trigger: CAACAGGGCCCCTCTCAGTCAGGGGCTCTTGGCCAT...TGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GCAGCTGCCCAGCTGAGCAGGGACCCCGCAGGAGGAACCAGAGCAGGAGAATCCGTCCCTACAGCTTCATaGCACTCCGGCGCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: AAAQLSRDPAGGTRAGESVPTAS*HSGAVS
Trigger: ACTCACGGCGCCGGAGTGGCATGAAGCTGTAGGGAC...GGATTCTCCTGCTCTGGTTCCTCCTGCGGGGTCCCTGCTCAGCTGGGCAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AGAGGCTGCAGGCGGAGGCGAGGAAGCCCGAGGCCCCAGCTCTTACGCTTCCATCTGACCGCTTGTCGATaGCCGAGCACACGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RGCRRRRGSPRPQLLRFHLTACR*PSTRSH
Trigger: ATGGCTCCGTGTGCTCGGCCATCGACAAGCGGTCAG...ATGGAAGCGTAAGAGCTGGGGCCTCGGGCTTCCTCGCCTCCGCCTGCAGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR CCA 90 bp ACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGAAGGACGCTGAGAGGCCCCTaGGGAGCGGGCTCTGAGACT +
Preference number: 4 (lower is better)
Translates to: TAAGPPSLPQGPGRVQRRTLRGP*GAGSET
Trigger: AGTCTCAGAGCCCGCTCCCCAGGGGCCTCTCAGCGT...CCTTCTTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR CCA 90 bp TGGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGAAGGGATGGGTGGGAGAGCCCGCCCTCTaGGATACGCTGAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: WASVSSSGSRKGSKKGWVGEPAL*DTLRGP
Trigger: GGGGCCTCTCAGCGTATCCCAGAGGGCGGGCTCTCC...CACCCATCCCTTCTTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR TCA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCGCAGATCCGTCTGCATaGAGGGCATCACCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFADPSA*RASPGR
Trigger: TCTACCTGGTGATGCCCTTCATGCAGACGGATCTGC...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCCTCACACCAGGGGCTGGGAGAGCCCGCCCTCTGGGATACGCTGAGAGGCCCCAGGCCTTTGAGCATCTaGTACACCAGGTACTGGATC +
Preference number: 4 (lower is better)
Translates to: ASHQGLGEPALWDTLRGPRPLSI*YTRYWI
Trigger: GATCCAGTACCTGGTGTATCAGATGCTCAAAGGCCT...GGGGCCTCTCAGCGTATCCCAGAGGGCGGGCTCTCCCAGCCCCTGGTGTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR TCA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCAGGCTGGGCAACCCTTaGATCCAAGCTGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFRLGNP*IQAGYS
Trigger: ACTGTACCCAGCTTGGATTCAAGGGTTGCCCAGCCT...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCTGCCATCTTCAGTTTaGTGGAATGGCCTTAGGCCT +
Preference number: 4 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLLPSSV*WNGLRP
Trigger: AGGCCTAAGGCCATTCCATCAAACTGAAGATGGCAG...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCCCATGGGTGCTCAATaGAGAAGTGAGGACAACTTG +
Preference number: 4 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLPMGAQ*RSEDNL
Trigger: CAAGTTGTCCTCACTTCTTCATTGAGCACCCATGGG...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp AGAGGCTGCAGGCGGAGGCGAGGAAGCCCGAGGCCCCAGCTCTTACGCTTCCATAGTCATCTCGGCGTCTaGATGTCGCGCCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: RGCRRRRGSPRPQLLRFHSHLGV*MSRQPK
Trigger: TTTGGGCTGGCGCGACATGCAGACGCCGAGATGACT...ATGGAAGCGTAAGAGCTGGGGCCTCGGGCTTCCTCGCCTCCGCCTGCAGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR GCA 90 bp TGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTCTCCGAACGCCAGGCAAGCCCTaGCCTGGGACACCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CHQARQEPISACAARSLRTPGKP*PGTPLL
Trigger: CAGCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGT...TCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGAGCAGGTCCGCAGCCTaGGGGCTGGCCCGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: AEFGSDKYWSLGSVWPAVSRSAA*GLARGN
Trigger: GTTCCCACGGGCCAGCCCCCAGGCTGCGGACCTGCT...CACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp TGCAGGCGGAGGCGAGGAAGCCCGAGGCCCCAGCTCTTACGCTTCCATTCATCCCCACCAAGAAGGAGGTaGCAGGTAGGGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: CRRRRGSPRPQLLRFHSSPPRRR*QVGLAE
Trigger: CTCTGCCAGCCCTACCTGCCACCTCCTTCTTGGTGG...GGATGAATGGAAGCGTAAGAGCTGGGGCCTCGGGCTTCCTCGCCTCCGCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR TCA 90 bp GCTGCAGGCGGAGGCGAGGAAGCCCGAGGCCCCAGCTCTTACGCTTCCATTCATGCGAAGATCTCGGACTaGAAGGGTCGGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AAGGGEEARGPSSYASIHAKISD*KGRLSF
Trigger: GAAGCTGAGCCGACCCTTTCAGTCCGAGATCTTCGC...ATGAATGGAAGCGTAAGAGCTGGGGCCTCGGGCTTCCTCGCCTCCGCCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR TCA 90 bp CGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCTCTGGGATACGCTaGGAGGCCCCTGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: RVLRNHQTAAGPPSLPQGPSGIR*EAPGER
Trigger: CCGCTCCCCAGGGGCCTCTCAGCGTATCCCAGAGGG...ACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR GCA 90 bp CGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTGGATGGGTGAGGGCCTaGGCGGCCGTCAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: RVLRNHQTAAGPPSLPQGGWVRA*AAVRRL
Trigger: CAAGCGCCTGACGGCCGCGCAGGCCCTCACCCATCC...ACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373759.1
ENST00000373766.9
CDS-3UTR GCA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCAAACCACACACTAAATaGTGCCCACAGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFKPHTK*CPQRAC
Trigger: GCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTT...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GCTGCAGGCGGAGGCGAGGAAGCCCGAGGCCCCAGCTCTTACGCTTCCATTCATGCACCCAGGAGACAATaGCCACCAAGAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AAGGGEEARGPSSYASIHAPRRQ*PPRRRW
Trigger: CCACCTCCTTCTTGGTGGGCATTGTCTCCTGGGTGC...ATGAATGGAAGCGTAAGAGCTGGGGCCTCGGGCTTCCTCGCCTCCGCCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR CCA 90 bp CGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCGCAGCCTGGGGGCTaGCCCGTGGGAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RVLRNHQTAAGPPSLPQGPQPGG*PVGTAE
Trigger: CTCAGCTGTTCCCACGGGCCAGCCCCCAGGCTGCGG...ACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CCA 90 bp GCAGCTGCCCAGCTGAGCAGGGACCCCGCAGGAGGAACCAGAGCAGGAGAATCCTCATCAAACGGCTGCTaGGCCTCCGTCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: AAAQLSRDPAGGTRAGESSSNGC*ASVSSS
Trigger: TGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGA...GGATTCTCCTGCTCTGGTTCCTCCTGCGGGGTCCCTGCTCAGCTGGGCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AGAGGCTGCAGGCGGAGGCGAGGAAGCCCGAGGCCCCAGCTCTTACGCTTCCATTCATCAAACGGCTGCTaGGCCTCCGTCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RGCRRRRGSPRPQLLRFHSSNGC*ASVSSS
Trigger: TGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGA...ATGGAAGCGTAAGAGCTGGGGCCTCGGGCTTCCTCGCCTCCGCCTGCAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR CCA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCGGTTTAATTCCGGAGTaGGGATGGCCTAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFGLIPE*GWPRRT
Trigger: TGTCCTCCTAGGCCATCCCCACTCCGGAATTAAACC...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCAGTCGGCTCAGCTTCTTaGTGGCCACCTTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPVGSAS*WPPSPL
Trigger: CAGGGGAGAAGGTGGCCATCAAGAAGCTGAGCCGAC...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp TGGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGAAGGGATGGGTGGCCCGTGGGAACAGCTaGGTGAAATCCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: WASVSSSGSRKGSKKGWVARGNS*VKSFLG
Trigger: CCCCAGGAAGGATTTCACTCAGCTGTTCCCACGGGC...CACCCATCCCTTCTTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR GCA 90 bp ATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGGCTTCAGGTCCCTGTaGACGACCCCAGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: IKRLLGLRLFLRVPEGFKGFRSL*TTPAEW
Trigger: CCACTCTGCTGGGGTCGTGCACAGGGACCTGAAGCC...TTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR GCA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACGGAAAGGGCCCCACCTaGAGGCGATTCTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNGKGPT*RRFSRW
Trigger: CCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCC...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCAGGTGCACACTGGGCTTaGCCTTACGGGGGCTATTCC +
Preference number: 4 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPGAHWA*PYGGYS
Trigger: GGAATAGCCCCCGTAAGGGCAAGCCCAGTGTGCACC...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCGTGAGGACAACTTGCTaGCATCTTCAGTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: GQHHPNPRQASPALGHRCVRTTC*HLQFDG
Trigger: TCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCAC...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACCTGACCGCTTGTCGATaGCCGAGCACACGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNLTACR*PSTRSH
Trigger: ATGGCTCCGTGTGCTCGGCCATCGACAAGCGGTCAG...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp TGGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGAAGGGATGGGTGCTGGGGGCTGGCCCGTaGGAACAGCTGAGTGAAATC +
Preference number: 4 (lower is better)
Translates to: WASVSSSGSRKGSKKGWVLGAGP*EQLSEI
Trigger: GATTTCACTCAGCTGTTCCCACGGGCCAGCCCCCAG...CACCCATCCCTTCTTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR CCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCACTGGGGGCTGGCCCGTaGGAACAGCTGAGTGAAATC +
Preference number: 4 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPLGAGP*EQLSEI
Trigger: GATTTCACTCAGCTGTTCCCACGGGCCAGCCCCCAG...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCCCCACAGCAGGAGAATaGACTTGTTTCCTATTACAC +
Preference number: 4 (lower is better)
Translates to: GQHHPNPRQASPALGHRCPTAGE*TCFLLH
Trigger: GTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGG...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCCTCAAAAGAGGGAATaGAGGGTACACTTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLPQKRE*RVHLLL
Trigger: TAAGAGCAAGTGTACCCTCCATTCCCTCTTTTGAGG...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCGGCACTGGTGCACACTaGGCTTGCCCTTACGGGGGC +
Preference number: 4 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSGTGAH*ACPYGG
Trigger: GCCCCCGTAAGGGCAAGCCCAGTGTGCACCAGTGCC...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp ATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGTCGGCTCAGCTTCTTaGTGGCCACCTTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: IKRLLGLRLFLRVPEGFKVGSAS*WPPSPL
Trigger: CAGGGGAGAAGGTGGCCATCAAGAAGCTGAGCCGAC...TTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR TCA 90 bp TGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCAAAGAAGGGATGGGTaGGGGCCTGCGCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: CSKESSNGCWASVSSSGSQRRDG*GPARPS
Trigger: TGACGGCCGCGCAGGCCCTCACCCATCCCTTCTTTG...GGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373759.1
ENST00000373766.9
CDS-3UTR TCA 90 bp AGCCTCACACCAGGGGCTGGGAGAGCCCGCCCTCTGGGATACGCTGAGAGGCCCTCCATTCATCCACTGTaGGTTTCTCGTGTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: SLTPGAGRARPLGYAERPSIHPL*VSRVLR
Trigger: CCTTAGAACACGAGAAACTCACAGTGGATGAATGGA...GGGCCTCTCAGCGTATCCCAGAGGGCGGGCTCTCCCAGCCCCTGGTGTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR TCA 90 bp GCAGCTGCCCAGCTGAGCAGGGACCCCGCAGGAGGAACCAGAGCAGGAGAATCCCTGCCATCTTCAGTTTaGTGGAATGGCCTTAGGCCT +
Preference number: 4 (lower is better)
Translates to: AAAQLSRDPAGGTRAGESLPSSV*WNGLRP
Trigger: AGGCCTAAGGCCATTCCATCAAACTGAAGATGGCAG...GGATTCTCCTGCTCTGGTTCCTCCTGCGGGGTCCCTGCTCAGCTGGGCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTGCTCAATGAAGAAGTaGGGACAACTTGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFCSMKK*GQLAAI
Trigger: GATGGCAGCAAGTTGTCCTCACTTCTTCATTGAGCA...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp AGAGGCTGCAGGCGGAGGCGAGGAAGCCCGAGGCCCCAGCTCTTACGCTTCCATCCAATGACGTTCTCATaGTGCATGTGCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RGCRRRRGSPRPQLLRFHPMTFS*CMCFSS
Trigger: GCTGCTGAAGCACATGCAGCATGAGAACGTCATTGG...ATGGAAGCGTAAGAGCTGGGGCCTCGGGCTTCCTCGCCTCCGCCTGCAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR GCA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGGCTTCAGGTCCCTGTaGACGACCCCAGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPAGFRSL*TTPAEW
Trigger: CCACTCTGCTGGGGTCGTGCACAGGGACCTGAAGCC...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CAAGCTGGGTACAGTGCTCAAGCCTACTTGGGTTCCAATCTGACTCCACCACTTGGATGGGTGAGGGCCTaGGCGGCCGTCAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: QAGYSAQAYLGSNLTPPLGWVRA*AAVRRL
Trigger: CAAGCGCCTGACGGCCGCGCAGGCCCTCACCCATCC...AAGTGGTGGAGTCAGATTGGAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGTGGCCGGCGGTGCCATaGAAGATGAGTCCCTACAGC +
Preference number: 4 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKWPAVP*KMSPYS
Trigger: GCTGTAGGGACTCATCTTGCATGGCACCGCCGGCCA...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACAAGGGACCACAGCCCTaGCAACACCTCCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNKGPQP*QHLHPR
Trigger: TCTGGGATGGAGGTGTTGGCAGGGCTGTGGTCCCTT...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCAACGGATCTCTTTACTaGAGGACTTGTCAAGACCTT +
Preference number: 4 (lower is better)
Translates to: GQHHPNPRQASPALGHRCNGSLY*RTCQDL
Trigger: AAGGTCTTGACAAGTCCTGCAGTAAAGAGATCCGTT...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGAAGGGATCTTCCTGGGGGTCTGTaGCAGGGACTGGATGTAGGA +
Preference number: 4 (lower is better)
Translates to: AAGPPSLPQGPGRVQRRDLPGGL*QGLDVG
Trigger: TCCTACATCCAGTCCCTGCCACAGACCCCCAGGAAG...ATCCCTTCTTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR CCA 90 bp GCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGGGTTCAAAGAAGGGATaGGTGAGGGCCTGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: AEFGSDKYWSLGSVWPAVGSKKG*VRACAA
Trigger: GGCCGCGCAGGCCCTCACCCATCCCTTCTTTGAACC...CACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGGTTCAAAGAAGGGATaGGTGAGGGCCTGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPAGSKKG*VRACAA
Trigger: GGCCGCGCAGGCCCTCACCCATCCCTTCTTTGAACC...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCATCCTTGGGCAGTGTCTaGCCGGCGGTGCCATGCAAG +
Preference number: 4 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPASLGSV*PAVPCK
Trigger: CTTGCATGGCACCGCCGGCCAGACACTGCCCAAGGA...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCTCCTTGGGCAGTGTCTaGCCGGCGGTGCCATGCAAG +
Preference number: 4 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSSLGSV*PAVPCK
Trigger: CTTGCATGGCACCGCCGGCCAGACACTGCCCAAGGA...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCATGGGCAGTTTAACGTaGCCTGTTAGGATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFMGSLT*PVRIRA
Trigger: AGCTCTGATCCTAACAGGCCACGTTAAACTGCCCAT...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGTTTGAGAAAACTCTGTaGGAGGGGCTGAGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLFEKTL*EGLRFN
Trigger: ATTAAACCTCAGCCCCTCCCACAGAGTTTTCTCAAA...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTGGCACTGGTGCACACTaGGCTTGCCCTTACGGGGGC +
Preference number: 4 (lower is better)
Translates to: RVLRNHQTAAGPPSLPQGGTGAH*ACPYGG
Trigger: GCCCCCGTAAGGGCAAGCCCAGTGTGCACCAGTGCC...ACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CCA 90 bp CAGCTCAAGGAGAAAGAAGCACCCAGGAGACAATGCCCACCAAGAAGGAGGTGGACTCACCCTGGGGGCTaGCCCGTGGGAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: QLKEKEAPRRQCPPRRRWTHPGG*PVGTAE
Trigger: CTCAGCTGTTCCCACGGGCCAGCCCCCAGGGTGAGT...CCACCTCCTTCTTGGTGGGCATTGTCTCCTGGGTGCTTCTTTCTCCTTGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR TCA 90 bp GCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGGTCGGCTCAGCTTCTTaGTGGCCACCTTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: AEFGSDKYWSLGSVWPAVVGSAS*WPPSPL
Trigger: CAGGGGAGAAGGTGGCCATCAAGAAGCTGAGCCGAC...CACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCAGCAGATCCGTCTGCATaGAGGGCATCACCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPADPSA*RASPGR
Trigger: TCTACCTGGTGATGCCCTTCATGCAGACGGATCTGC...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCGTGGGAACAGCTaGGTGAAATCCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPAARGNS*VKSFLG
Trigger: CCCCAGGAAGGATTTCACTCAGCTGTTCCCACGGGC...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp ACTAGGCTTGGGTCAGGGCGAGAGGTCCTCATTCAAATGCACATTCTAAGGTCTGCCACTCCGGCGCCGTaGGTCCTTCCGGGCAATGGG +
Preference number: 4 (lower is better)
Translates to: TRLGSGREVLIQMHILRSATPAP*VLPGNG
Trigger: CCCATTGCCCGGAAGGACTCACGGCGCCGGAGTGGC...AGACCTTAGAATGTGCATTTGAATGAGGACCTCTCGCCCTGACCCAAGCCTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp TTCTGCCTGTGCAGCTCGCAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCCACTCCGGCGCCGTaGGTCCTTCCGGGCAATGGG +
Preference number: 4 (lower is better)
Translates to: FCLCSSQSPSLLLFHILIATPAP*VLPGNG
Trigger: CCCATTGCCCGGAAGGACTCACGGCGCCGGAGTGGC...AATCAAGATATGAAACAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGACTCCCCAGCTCCTTaGCAGCAGGGCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPADSPAP*QQGHSV
Trigger: CACAGAATGGCCCTGCTGTCAAGGAGCTGGGGAGTC...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCGAAACTTCACAGATTTaGGAAAACTCTGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFETSQI*ENSVGG
Trigger: CCCTCCCACAGAGTTTTCTCAAATCTGTGAAGTTTC...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CAAGCTGGGTACAGTGCTCAAGCCTACTTGGGTTCCAATCTGACTCCACCACTTAGCCATAGGCCCCGCTaGCGACGTGCGTCGGGGACA +
Preference number: 4 (lower is better)
Translates to: QAGYSAQAYLGSNLTPPLSHRPR*RRASGT
Trigger: TGTCCCCGACGCACGTCGGCAGCGGGGCCTATGGCT...AAGTGGTGGAGTCAGATTGGAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGAGTCATCTCGGCGTCTaGATGTCGCGCCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKSHLGV*MSRQPK
Trigger: TTTGGGCTGGCGCGACATGCAGACGCCGAGATGACT...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCGCCCATTTCTGCCTGTaGAGCTCGCAGTCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSAHFCL*SSQSPS
Trigger: GCTCGGAGACTGCGAGCTGCACAGGCAGAAATGGGC...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGCACCTGCAGTCCTGGTaGACCTGGGTGGCACAGACC +
Preference number: 4 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRHLQSW*TWVAQT
Trigger: GGTCTGTGCCACCCAGGTGCACCAGGACTGCAGGTG...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCCCCTGGCACCACCCTTaGTCCAGTACACACCCATGG +
Preference number: 4 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSPWHHP*SSTHPW
Trigger: CCATGGGTGTGTACTGGAGCAAGGGTGGTGCCAGGG...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTCTCCGACTGTTGACACTCACATaGCACCCGCCCAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: CHQARQEPISACAARSLRLLTLT*HPPRVR
Trigger: CCTCACTCTGGGCGGGTGGCATGTGAGTGTCAACAG...TCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp TGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTCTCCGAACAAATACTGGTCCTTaGGCAGTGTCTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: CHQARQEPISACAARSLRTNTGP*AVSGRR
Trigger: CCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGT...TCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACGGTATTTGCTCACAGTaGGCAATGGGAAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNGICSQ*AMGRGG
Trigger: GCCTCCCCTTCCCATTGCCCACTGTGAGCAAATACC...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp TCGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGAGGCAAGCCCTGCCCTaGGACACCGCTGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SCSKESSNGCWASVSSSGRQALP*DTAAVC
Trigger: ACAGACAGCAGCGGTGTCCCAGGGCAGGGCTTGCCT...CCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR TCA 90 bp AAACAGAGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGCCACCTTCTCCCCTaGCCGCTTGTCGATGGCCGA +
Preference number: 4 (lower is better)
Translates to: KQRPWTQSAVRVSDWREEGHLLP*PLVDGR
Trigger: TCGGCCATCGACAAGCGGTCAGGGGAGAAGGTGGCC...CTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCTCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CTCAAGGAGAAAGAAGCACCCAGGAGACAATGCCCACCAAGAAGGAGGTGGCAGTGTAGTGCATCCAGCTaGGGATCACCTCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LKEKEAPRRQCPPRRRWQCSASS*GSPRGL
Trigger: GAGCCCCCGAGGTGATCCTCAGCTGGATGCACTACA...CTGCCACCTCCTTCTTGGTGGGCATTGTCTCCTGGGTGCTTCTTTCTCCTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR TCA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACGTGCACAAGGAAATTTaGGACCCACTGTGCCCGACA +
Preference number: 4 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNVHKEI*DPLCPT
Trigger: TGTCGGGCACAGTGGGTCTCAAATTTCCTTGTGCAC...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCATTTTCCTTGGGGCAGTaGGAATTCTCAGGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: PLWREGKGPTCRRFSRWAFSLGQ*EFSGGL
Trigger: TAAGCCTCCTGAGAATTCTCACTGCCCCAAGGAAAA...TGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCTCCACCAAGAATACCTaGGCCCACATCTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSSTKNT*AHISPS
Trigger: GGAGGGGGAGATGTGGGCTCAGGTATTCTTGGTGGA...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGTGGCCGGCGGTGCCATaGAAGATGAGTCCCTACAGC +
Preference number: 4 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRWPAVP*KMSPYS
Trigger: GCTGTAGGGACTCATCTTGCATGGCACCGCCGGCCA...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTGCCCGACAGCTTGTaGACATGGAAATTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PLWREGKGPTCRRFSRWAVPDSL*TWKFVL
Trigger: CAGAACAAATTTCCATGTGCACAAGCTGTCGGGCAC...TGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACATTACACAGGCCATGTaGCCACTGGGCAAGACCCAA +
Preference number: 4 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNITQAM*PLGKTQ
Trigger: TTGGGTCTTGCCCAGTGGGCACATGGCCTGTGTAAT...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGAAAGCTATTTCAATGTaGCAAGTGAAAGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLKAISM*QVKVEP
Trigger: TGGCTCAACTTTCACTTGGCACATTGAAATAGCTTT...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GCTGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCACATAGGCCCCCGGCCTaGCTCAGCGCCCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: AVFQEGLSLVVTNTGPWAHRPPA*LSAHSA
Trigger: GGCTGAGTGGGCGCTGAGCCAGGCCGGGGGCCTATG...TGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACGTGAAGAGGGAAGGCTaGGCAACCCTTGAATCCAAG +
Preference number: 4 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNVKREG*ATLESK
Trigger: CTTGGATTCAAGGGTTGCCCAGCCTTCCCTCTTCAC...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCGAATGGAGAGGAGAATaGAGGGCCTTCCACGCACGG +
Preference number: 4 (lower is better)
Translates to: VLRNHQTAAGPPSLPQGPEWRGE*RAFHAR
Trigger: CCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCATTC...GGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CCA 90 bp GCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGGCTCACAGTGGGCAATaGGAAGGGGAGGCCAAACCA +
Preference number: 4 (lower is better)
Translates to: AEFGSDKYWSLGSVWPAVAHSGQ*EGEAKP
Trigger: TGGTTTGGCCTCCCCTTCCCATTGCCCACTGTGAGC...CACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGAGCAGGAGAATCCCTaGCACCACCCTTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPAEQENP*HHPCSS
Trigger: ACTGGAGCAAGGGTGGTGCCAGGGATTCTCCTGCTC...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 72 bp TTCCACGCACGGGCACTAAAAGAAGGCCAAGCCTACTaGGGGAGAGGCAATATCGGGACCTGTGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: FHARALKEGQAY*GRGNIGTCALG
Trigger: GCCCAGTGCACAGGTCCCGATATTGCCTCTCCCCAAGTAGGCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CAAGCTGGGTACAGTGCTCAAGCCTACTTGGGTTCCAATCTGACTCCACCACTTAGCCCTTTTTCCGGATaGGGCTCATCCCGGGCACCC +
Preference number: 4 (lower is better)
Translates to: QAGYSAQAYLGSNLTPPLSPFSG*GSSRAP
Trigger: GGGTGCCCGGGATGAGCCTCATCCGGAAAAAGGGCT...AAGTGGTGGAGTCAGATTGGAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGGTGCACAAGGAAATTTaGGACCCACTGTGCCCGACA +
Preference number: 4 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKVHKEI*DPLCPT
Trigger: TGTCGGGCACAGTGGGTCTCAAATTTCCTTGTGCAC...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp TCGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGCTCTGTGGGAGGGGCTaGGGTTTAATTCCGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SCSKESSNGCWASVSSSGLCGRG*GLIPEW
Trigger: CCACTCCGGAATTAAACCTCAGCCCCTCCCACAGAG...CCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR GCA 90 bp TGGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGAAGGGATGGGTGATGACGTTCTCATGCTaGATGTGCTTCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WASVSSSGSRKGSKKGWVMTFSC*MCFSSS
Trigger: GCTGCTGCTGAAGCACATGCAGCATGAGAACGTCAT...CACCCATCCCTTCTTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR GCA 90 bp ACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGAAGGATCCCCATGATCTTCTaGAGATCCGTCTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: TAAGPPSLPQGPGRVQRRIPMIF*RSVCMK
Trigger: CTTCATGCAGACGGATCTGCAGAAGATCATGGGGAT...CCTTCTTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR GCA 90 bp GTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCGGGAGCAGAACGGTTTaGCATCAAGCCAGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: VLRNHQTAAGPPSLPQGPGSRTV*HQARQE
Trigger: CTCTTGCCTGGCTTGATGGCAAACCGTTCTGCTCCC...GGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR GCA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGCAATATCGGGACCTGTaGACTGGGCTGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRQYRDL*TGLHWA
Trigger: TGCCCAGTGCAGCCCAGTGCACAGGTCCCGATATTG...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGACGCCAGGCAAGCCCTaGCCTGGGACACCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMTPGKP*PGTPLL
Trigger: CAGCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGT...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGGGGACACGTAGGTCTTaGGCAGCTCCCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLGTRRS*AAPRLS
Trigger: AGACAGCCTGGGAGCTGCCCAAGACCTACGTGTCCC...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCTCATCAAACGGCTGCTaGGCCTCCGTCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSSSNGC*ASVSSS
Trigger: TGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGA...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCAGGTAGTGACAAATACTaGTCCTTGGGCAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPGSDKY*SLGSVW
Trigger: CCAGACACTGCCCAAGGACCAGTATTTGTCACTACC...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGCCTGGTGCACCTGGGTaGCACAGACCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLPGAPG*HRPVVP
Trigger: TGGGACTACAGGTCTGTGCCACCCAGGTGCACCAGG...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGGCTCACAGTGGGCAATaGGAAGGGGAGGCCAAACCA +
Preference number: 4 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRAHSGQ*EGEAKP
Trigger: TGGTTTGGCCTCCCCTTCCCATTGCCCACTGTGAGC...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGGGTTTAATTCCGGAGTaGGGATGGCCTAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKGLIPE*GWPRRT
Trigger: TGTCCTCCTAGGCCATCCCCACTCCGGAATTAAACC...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GCAGCTGCCCAGCTGAGCAGGGACCCCGCAGGAGGAACCAGAGCAGGAGAATCCAGCTATAGCATTGCTTaGGGCCATGGAAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: AAAQLSRDPAGGTRAGESSYSIA*GHGKTV
Trigger: AACTGTTTTTCCATGGCCCCAAGCAATGCTATAGCT...GGATTCTCCTGCTCTGGTTCCTCCTGCGGGGTCCCTGCTCAGCTGGGCAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CTCAAGGAGAAAGAAGCACCCAGGAGACAATGCCCACCAAGAAGGAGGTGGCAGGCAGATCCGTCTGCATaGAGGGCATCACCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LKEKEAPRRQCPPRRRWQADPSA*RASPGR
Trigger: TCTACCTGGTGATGCCCTTCATGCAGACGGATCTGC...CTGCCACCTCCTTCTTGGTGGGCATTGTCTCCTGGGTGCTTCTTTCTCCTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR TCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGCAAAGAAGGGATGGGTaGGGGCCTGCGCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMQRRDG*GPARPS
Trigger: TGACGGCCGCGCAGGCCCTCACCCATCCCTTCTTTG...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp AAACAGAGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGACTCCCCAGCTCCTTaGCAGCAGGGCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: KQRPWTQSAVRVSDWREEDSPAP*QQGHSV
Trigger: CACAGAATGGCCCTGCTGTCAAGGAGCTGGGGAGTC...CTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCTCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGCCTAAGGTAGAGCCTTaGAGGCCAAGGAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: AEFGSDKYWSLGSVWPAVPKVEP*RPRRME
Trigger: CTCCATTCTCCTTGGCCTTCAAGGCTCTACCTTAGG...CACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGGTCGGGGCAAAGAAGTaGCCGACAGGCCCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMVGAKK*PTGPWD
Trigger: GTCCCAGGGGCCTGTCGGTCACTTCTTTGCCCCGAC...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCATTTCAATGTGCCAAGTaGAAGTTGAGCCATGCCCTC +
Preference number: 4 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPFQCAK*KLSHAL
Trigger: GAGGGCATGGCTCAACTTTCACTTGGCACATTGAAA...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp TTCTGCCTGTGCAGCTCGCAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTATGGCCAAGAGCCCCTaGCTGAGAGGGGCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: FCLCSSQSPSLLLFHILIMAKSP*LRGALL
Trigger: CAACAGGGCCCCTCTCAGTCAGGGGCTCTTGGCCAT...AATCAAGATATGAAACAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACATCCCCATGATCTTCTaGAGATCCGTCTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNIPMIF*RSVCMK
Trigger: CTTCATGCAGACGGATCTGCAGAAGATCATGGGGAT...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ACGGTTTGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTTTGTCGTTCAGCTTCTaGACAAACTCCGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TVCHQARQEPISACAARSLSFSF*TNSVPG
Trigger: GCCTGGCACGGAGTTTGTGCAGAAGCTGAACGACAA...ACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCAAACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000211287.9
CDS-3UTR GCA 90 bp TCTCTCTGCAACTCCCTTAATTTAGCAGCCAAACACATTGGGTTCCTTCACAGAGGATGGGTGAGGGCCTaGGCGGCCGTCAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: SLCNSLNLAAKHIGFLHRGWVRA*AAVRRL
Trigger: CAAGCGCCTGACGGCCGCGCAGGCCCTCACCCATCC...TCTGTGAAGGAACCCAATGTGTTTGGCTGCTAAATTAAGGGAGTTGCAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGCCAAGCTGGGTACAGTaGTCAAGCCTACTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: AEFGSDKYWSLGSVWPAVPSWVQ*SSLLGF
Trigger: GAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTGG...CACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TCGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGGCCCTGGGACACCGCTaGTGTCTGTTTTCATGGATG +
Preference number: 4 (lower is better)
Translates to: SCSKESSNGCWASVSSSGALGHR*CLFSWM
Trigger: CATCCATGAAAACAGACAGCAGCGGTGTCCCAGGGC...CCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CCA 90 bp TCTCTCTGCAACTCCCTTAATTTAGCAGCCAAACACATTGGGTTCCTTCACAGACCGCAGCCTGGGGGCTaGCCCGTGGGAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SLCNSLNLAAKHIGFLHRPQPGG*PVGTAE
Trigger: CTCAGCTGTTCCCACGGGCCAGCCCCCAGGCTGCGG...TCTGTGAAGGAACCCAATGTGTTTGGCTGCTAAATTAAGGGAGTTGCAGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGACAGCTTGTGCACATaGAAATTTGTTCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PLWREGKGPTCRRFSRWADSLCT*KFVLPK
Trigger: CTTTGGCAGAACAAATTTCCATGTGCACAAGCTGTC...TGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGGGTATTTGCTCACAGTaGGCAATGGGAAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRGICSQ*AMGRGG
Trigger: GCCTCCCCTTCCCATTGCCCACTGTGAGCAAATACC...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGATTCCGGAGTGGGGATaGCCTAGGAGGACACCAGAG +
Preference number: 4 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLIPEWG*PRRTPE
Trigger: CTCTGGTGTCCTCCTAGGCCATCCCCACTCCGGAAT...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTAGGCAAGCCCTGCCCTaGGACACCGCTGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLRQALP*DTAAVC
Trigger: ACAGACAGCAGCGGTGTCCCAGGGCAGGGCTTGCCT...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 72 bp AGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTaGGGCAGTGTCTGGCCGGCGGTGCCATGCAAGATG +
Preference number: 4 (lower is better)
Translates to: RRAEFGSDKYWS*GSVWPAVPCKM
Trigger: CATCTTGCATGGCACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 72 bp AGACTAGCCAGTCCCAGTCAAGGACTCCCCAGCTCCTaGACAGCAGGGCCATTCTGTGGGAGAGAAAACAGA +
Preference number: 4 (lower is better)
Translates to: RLASPSQGLPSS*TAGPFCGRENR
Trigger: TCTGTTTTCTCTCCCACAGAATGGCCCTGCTGTCAAGGAGCTGGGGAGTCCTTGACTGGGACTGGCTAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp TTCTGCCTGTGCAGCTCGCAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTTGTAGTGCATCCAGCTaGGGATCACCTCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: FCLCSSQSPSLLLFHILICSASS*GSPRGL
Trigger: GAGCCCCCGAGGTGATCCTCAGCTGGATGCACTACA...AATCAAGATATGAAACAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACCTTCTGTCCTCTGCTTaGAAGGCTGTATTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNLLSSA*KAVFQE
Trigger: TTCTTGGAATACAGCCTTTCAAGCAGAGGACAGAAG...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGCCTGTGAATGCAGAATaGACCTTACGGTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: AEFGSDKYWSLGSVWPAVPVNAE*TLRWIP
Trigger: TGGGATCCACCGTAAGGTTCATTCTGCATTCACAGG...CACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACACCTCCACCGCCTTTTaGAGAAACTTCACAGATTTG +
Preference number: 4 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNTSTAF*RNFTDL
Trigger: CAAATCTGTGAAGTTTCTTCAAAAGGCGGTGGAGGT...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCGTGCCAAGTGAAAGTTaGGCCATGCCCTCATCCAAA +
Preference number: 4 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSVPSES*AMPSSK
Trigger: TTTGGATGAGGGCATGGCTCAACTTTCACTTGGCAC...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCCCCATGGGTGCTCAATaGAGAAGTGAGGACAACTTG +
Preference number: 4 (lower is better)
Translates to: VLRNHQTAAGPPSLPQGPPMGAQ*RSEDNL
Trigger: CAAGTTGTCCTCACTTCTTCATTGAGCACCCATGGG...GGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR GCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCATGACGTTCTCATGCTaGATGTGCTTCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSMTFSC*MCFSSS
Trigger: GCTGCTGCTGAAGCACATGCAGCATGAGAACGTCAT...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGGAATCATCAAACGGCTaGTGGGCCTCCGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLESSNG*WASVSS
Trigger: GGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTC...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTGTCCCTACAGCTTCATaGCACTCCGGCGCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGVPTAS*HSGAVS
Trigger: ACTCACGGCGCCGGAGTGGCATGAAGCTGTAGGGAC...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGCACCTGCAGTCCTGGTaGACCTGGGTGGCACAGACC +
Preference number: 4 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMHLQSW*TWVAQT
Trigger: GGTCTGTGCCACCCAGGTGCACCAGGACTGCAGGTG...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCCAAGCTGGGTACAGTaGTCAAGCCTACTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: CSKESSNGCWASVSSSGSPSWVQ*SSLLGF
Trigger: GAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTGG...GGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR GCA 90 bp GCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGTCACGCACAGGTATTTaGTCACAGTGGGCAATGGGA +
Preference number: 4 (lower is better)
Translates to: AEFGSDKYWSLGSVWPAVSRTGI*SQWAMG
Trigger: TCCCATTGCCCACTGTGAGCAAATACCTGTGCGTGA...CACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCTCACGCACAGGTATTTaGTCACAGTGGGCAATGGGA +
Preference number: 4 (lower is better)
Translates to: VLRNHQTAAGPPSLPQGPSRTGI*SQWAMG
Trigger: TCCCATTGCCCACTGTGAGCAAATACCTGTGCGTGA...GGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR GCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCTCCTGCTGGGCTCTCTaGCACCTTCCATATGACATT +
Preference number: 4 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSSCWAL*HLPYDI
Trigger: AATGTCATATGGAAGGTGGCAGAGAGCCCAGCAGGA...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGTGTCTCCCCTTGTGCTaGCCCTCACTGGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMCLPLC*PSLGAA
Trigger: TGCTGCCCCCAGTGAGGGGCAGCACAAGGGGAGACA...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TTCTGCCTGTGCAGCTCGCAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGGTGCACACTGGGCTTaGCCTTACGGGGGCTATTCC +
Preference number: 4 (lower is better)
Translates to: FCLCSSQSPSLLLFHILIGAHWA*PYGGYS
Trigger: GGAATAGCCCCCGTAAGGGCAAGCCCAGTGTGCACC...AATCAAGATATGAAACAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TTCTGCCTGTGCAGCTCGCAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTAGCTCCGGGCACCCGTaGACACTGGGTTCACCCTTA +
Preference number: 4 (lower is better)
Translates to: FCLCSSQSPSLLLFHILISSGHP*TLGSPL
Trigger: TAAGGGTGAACCCAGTGTGCACGGGTGCCCGGAGCT...AATCAAGATATGAAACAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTAGCTCCGGGCACCCGTaGACACTGGGTTCACCCTTA +
Preference number: 4 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLSSGHP*TLGSPL
Trigger: TAAGGGTGAACCCAGTGTGCACGGGTGCCCGGAGCT...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CATTCATCCACTGTGAGTTTCTCGTGTTCTAAGGAATCATCAAACGGCTGCTGGCACTCAGCCCCACTCTaGCGGGAAGGAAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: HSSTVSFSCSKESSNGCWHSAPL*REGKGP
Trigger: GGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTG...CCAGCAGCCGTTTGATGATTCCTTAGAACACGAGAAACTCACAGTGGATGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CCA 90 bp TGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTCTCCGACACACAGGATTAGGGTaGGCCCTAAATCCAATGACT +
Preference number: 4 (lower is better)
Translates to: CHQARQEPISACAARSLRHTGLG*ALNPMT
Trigger: AGTCATTGGATTTAGGGCCCACCCTAATCCTGTGTG...TCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTCTGAGTCACAAGCCCTaGGGTGGGGCCCAGGAATCT +
Preference number: 4 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGLSHKP*GGAQES
Trigger: AGATTCCTGGGCCCCACCCCAGGGCTTGTGACTCAG...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCCATATGACATTGGCCTaGTCGGGGCAAAGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSHMTLA*SGQRSD
Trigger: GTCACTTCTTTGCCCCGACCAGGCCAATGTCATATG...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGTGCTGTCTGTTTTCATaGATGACTCAGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AEFGSDKYWSLGSVWPAVCCLFS*MTQAPA
Trigger: TGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCA...CACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGCTGTCTGTAGTGAGTTaGATCATTTCCCCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKLSVVS*IISPWN
Trigger: ATTCCAGGGGGAAATGATTCAACTCACTACAGACAG...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp ACGGTTTGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTTCACCCAAAATAACCTaGATGCAATCGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: TVCHQARQEPISACAARSSPKIT*MQSHQL
Trigger: CAGCTGGTGCGATTGCATTCAGGTTATTTTGGGTGA...ACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCAAACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGCTGCCACCTTCCATATaGCATTGGCCTGGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMLPPSI*HWPGRG
Trigger: GCCCCGACCAGGCCAATGTCATATGGAAGGTGGCAG...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTCTCTGTGGGAGGGGCTaGGGTTTAATTCCGGAGTGG +
Preference number: 4 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGLCGRG*GLIPEW
Trigger: CCACTCCGGAATTAAACCTCAGCCCCTCCCACAGAG...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCTGCTCAATGAAGAAGTaGGGACAACTTGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSCSMKK*GQLAAI
Trigger: GATGGCAGCAAGTTGTCCTCACTTCTTCATTGAGCA...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ACTAGGCTTGGGTCAGGGCGAGAGGTCCTCATTCAAATGCACATTCTAAGGTCTTCTGCACAAACTCCGTaGCAGGCACCCCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: TRLGSGREVLIQMHILRSSAQTP*QAPRSL
Trigger: AAGTGACCGGGGTGCCTGGCACGGAGTTTGTGCAGA...AGACCTTAGAATGTGCATTTGAATGAGGACCTCTCGCCCTGACCCAAGCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000211287.9
CDS-3UTR GCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGGGAAAGGGCCCCACCTaGAGGCGATTCTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMGKGPT*RRFSRW
Trigger: CCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCC...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTAAGGGACCACAGCCCTaGCAACACCTCCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLKGPQP*QHLHPR
Trigger: TCTGGGATGGAGGTGTTGGCAGGGCTGTGGTCCCTT...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAACAGATGGTAACAAATaGACAATAGGTATCCACCAT +
Preference number: 4 (lower is better)
Translates to: PLWREGKGPTCRRFSRWATDGNK*TIGIHH
Trigger: ATGGTGGATACCTATTGTGCATTTGTTACCATCTGT...TGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTCAATATCGGGACCTGTaGACTGGGCTGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGQYRDL*TGLHWA
Trigger: TGCCCAGTGCAGCCCAGTGCACAGGTCCCGATATTG...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGAAACCACACACTAAATaGTGCCCACAGAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLKPHTK*CPQRAC
Trigger: GCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTT...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAAAAGCTATTTCAATGTaGCAAGTGAAAGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PLWREGKGPTCRRFSRWAKAISM*QVKVEP
Trigger: TGGCTCAACTTTCACTTGGCACATTGAAATAGCTTT...TGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTCTGTTGACACTCACATaGCACCCGCCCAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGLLTLT*HPPRVR
Trigger: CCTCACTCTGGGCGGGTGGCATGTGAGTGTCAACAG...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AAGCTAAAAAGAGCCAAGGAAGGATTCTTCCCCAGAGCCTTCAAAGGGACCACACTGGGGGCTGGCCCGTaGGAACAGCTGAGTGAAATC +
Preference number: 4 (lower is better)
Translates to: KLKRAKEGFFPRAFKGTTLGAGP*EQLSEI
Trigger: GATTTCACTCAGCTGTTCCCACGGGCCAGCCCCCAG...TGTGGTCCCTTTGAAGGCTCTGGGGAAGAATCCTTCCTTGGCTCTTTTTAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CAAGCTGGGTACAGTGCTCAAGCCTACTTGGGTTCCAATCTGACTCCACCACTTGTAAGGGTCTCAGACTaGCGTGAAGAGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QAGYSAQAYLGSNLTPPLVRVSD*REEGRL
Trigger: CAGCCTTCCCTCTTCACGCCAGTCTGAGACCCTTAC...AAGTGGTGGAGTCAGATTGGAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp TGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTCTCCGAGCTAGACTTTTTCCTTaGGGCAGTGAGAATTCTCAG +
Preference number: 4 (lower is better)
Translates to: CHQARQEPISACAARSLRARLFP*GSENSQ
Trigger: CTGAGAATTCTCACTGCCCCAAGGAAAAAGTCTAGC...TCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGGCTGTTGGGAGAAAATaGGTCCTGCGGTTAAGTACA +
Preference number: 4 (lower is better)
Translates to: AEFGSDKYWSLGSVWPAVAVGRK*VLRLST
Trigger: TGTACTTAACCGCAGGACCCATTTTCTCCCAACAGC...CACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp TGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCTGTGTGTCATGCTGTTaGGAGAAAATGGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: CSKESSNGCWASVSSSGSCVSCC*EKMGPA
Trigger: CGCAGGACCCATTTTCTCCCAACAGCATGACACACA...GGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGGGCACCCGTGCACACTaGGTTCACCCTTACGGAGCT +
Preference number: 4 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMGTRAH*VHPYGA
Trigger: AGCTCCGTAAGGGTGAACCCAGTGTGCACGGGTGCC...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAAGCCCTTTTTCCGGATaGGGCTCATCCCGGGCACCC +
Preference number: 4 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKSPFSG*GSSRAP
Trigger: GGGTGCCCGGGATGAGCCTCATCCGGAAAAAGGGCT...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp ACGGTTTGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTCTTCTGTCCTCTGCTTaGAAGGCTGTATTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TVCHQARQEPISACAARSLLSSA*KAVFQE
Trigger: TTCTTGGAATACAGCCTTTCAAGCAGAGGACAGAAG...ACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCAAACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAGAACTCCAGCCCGGGTaGCAGAGCCAGACCCTGTCT +
Preference number: 4 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKELQPG*QSQTLS
Trigger: AGACAGGGTCTGGCTCTGTCACCCGGGCTGGAGTTC...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCCCTGTGAATGCAGAATaGACCTTACGGTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFPVNAE*TLRWIP
Trigger: TGGGATCCACCGTAAGGTTCATTCTGCATTCACAGG...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGAGCTGCAGCTCTCTCTaGAACTCCCTTAATTTAGCA +
Preference number: 4 (lower is better)
Translates to: AEFGSDKYWSLGSVWPAVSCSSL*NSLNLA
Trigger: TGCTAAATTAAGGGAGTTGCAGAGAGAGCTGCAGCT...CACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTTGCAATCGCACCAGCTaGAGCTCTCTCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLCNRTS*SSLCNS
Trigger: GGAGTTGCAGAGAGAGCTGCAGCTGGTGCGATTGCA...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTGCAAGAGCCCATTTCTaGCTGTGCAGCTCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLARAHF*LCSSQS
Trigger: AGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGC...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TCGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGGTGCCCGACAGCTTGTaGACATGGAAATTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: SCSKESSNGCWASVSSSGVPDSL*TWKFVL
Trigger: CAGAACAAATTTCCATGTGCACAAGCTGTCGGGCAC...CCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CCA 90 bp GCTGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCACTTCCTGGGGGTCTGTaGCAGGGACTGGATGTAGGA +
Preference number: 4 (lower is better)
Translates to: AVFQEGLSLVVTNTGPWALPGGL*QGLDVG
Trigger: TCCTACATCCAGTCCCTGCCACAGACCCCCAGGAAG...TGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CAAGCTGGGTACAGTGCTCAAGCCTACTTGGGTTCCAATCTGACTCCACCACTTGCCTCCCGAGTAGTTTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: QAGYSAQAYLGSNLTPPLASRVV*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAAACTACTCGGGAGGC...AAGTGGTGGAGTCAGATTGGAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGGCTGTTGGGAGAAAATaGGTCCTGCGGTTAAGTACA +
Preference number: 4 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRAVGRK*VLRLST
Trigger: TGTACTTAACCGCAGGACCCATTTTCTCCCAACAGC...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GCTGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAATTCCGGAGTGGGGATaGCCTAGGAGGACACCAGAG +
Preference number: 4 (lower is better)
Translates to: AVFQEGLSLVVTNTGPWAIPEWG*PRRTPE
Trigger: CTCTGGTGTCCTCCTAGGCCATCCCCACTCCGGAAT...TGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCAGGCCATGTGCCCACTaGGCAAGACCCAAACCCGTG +
Preference number: 4 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMARPCAH*ARPKPV
Trigger: CACGGGTTTGGGTCTTGCCCAGTGGGCACATGGCCT...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp AAACAGAGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGAGGCCTTTGAGCATCTaGTACACCAGGTACTGGATC +
Preference number: 4 (lower is better)
Translates to: KQRPWTQSAVRVSDWREERPLSI*YTRYWI
Trigger: GATCCAGTACCTGGTGTATCAGATGCTCAAAGGCCT...CTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp TCGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCATTCATCCACTGTaGGTTTCTCGTGTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: SCSKESSNGCWASVSSSGSIHPL*VSRVLR
Trigger: CCTTAGAACACGAGAAACTCACAGTGGATGAATGGA...CCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373759.1
ENST00000373766.9
CDS-3UTR TCA 90 bp GCTGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAAGGTCGAGGCTACAGTaGGCTGTGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: AVFQEGLSLVVTNTGPWARSRLQ*AVIAPL
Trigger: CAGTGGTGCAATCACAGCTCACTGTAGCCTCGACCT...TGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GCTGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAAATGCTGTCTGGGCCTaGAGGGTGGCTCATGCCTAT +
Preference number: 4 (lower is better)
Translates to: AVFQEGLSLVVTNTGPWANAVWA*RVAHAY
Trigger: ATAGGCATGAGCCACCCTGCAGGCCCAGACAGCATT...TGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CAAGCTGGGTACAGTGCTCAAGCCTACTTGGGTTCCAATCTGACTCCACCACTTACAAGGGGTTTTGAATaGCAGGCCAAGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QAGYSAQAYLGSNLTPPLTRGFE*QAKKEG
Trigger: GCCTTCCTTCTTGGCCTGGCATTCAAAACCCCTTGT...AAGTGGTGGAGTCAGATTGGAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGAGGCTATGTGTGTCATaGTGTTGGGAGAAAATGGGT +
Preference number: 4 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRRLCVS*CWEKMG
Trigger: ACCCATTTTCTCCCAACAGCATGACACACATAGCCT...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp AAGCTAAAAAGAGCCAAGGAAGGATTCTTCCCCAGAGCCTTCAAAGGGACCACAGCCCTGGGACACCGCTaGTGTCTGTTTTCATGGATG +
Preference number: 4 (lower is better)
Translates to: KLKRAKEGFFPRAFKGTTALGHR*CLFSWM
Trigger: CATCCATGAAAACAGACAGCAGCGGTGTCCCAGGGC...TGTGGTCCCTTTGAAGGCTCTGGGGAAGAATCCTTCCTTGGCTCTTTTTAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ACGGTTTGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTGAAGTGAGGACAACTTaGTGCCATCTTCAGTTTGAT +
Preference number: 4 (lower is better)
Translates to: TVCHQARQEPISACAARSEVRTT*CHLQFD
Trigger: ATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTC...ACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCAAACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGAAGTGAGGACAACTTaGTGCCATCTTCAGTTTGAT +
Preference number: 4 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPAEVRTT*CHLQFD
Trigger: ATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTC...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp AGAGCTAGTTTCTCCCAACCGACATCTTTGAATTCTGCATCTACTAGGCCCATTCCCTGGCACCACCCTTaGTCCAGTACACACCCATGG +
Preference number: 4 (lower is better)
Translates to: RASFSQPTSLNSASTRPIPWHHP*SSTHPW
Trigger: CCATGGGTGTGTACTGGAGCAAGGGTGGTGCCAGGG...AATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCACAAATACTGGTCCTTaGGCAGTGTCTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMATNTGP*AVSGRR
Trigger: CCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGT...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AAGCTAAAAAGAGCCAAGGAAGGATTCTTCCCCAGAGCCTTCAAAGGGACCACAGTCAGGTCAAAGCTCTaGAGAGCTGTGCCATCTCCC +
Preference number: 4 (lower is better)
Translates to: KLKRAKEGFFPRAFKGTTVRSKL*RAVPSP
Trigger: GGGAGATGGCACAGCTCTCCAGAGCTTTGACCTGAC...TGTGGTCCCTTTGAAGGCTCTGGGGAAGAATCCTTCCTTGGCTCTTTTTAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AAACAGAGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGTGTGTGTCATGCTGTTaGGAGAAAATGGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: KQRPWTQSAVRVSDWREECVSCC*EKMGPA
Trigger: CGCAGGACCCATTTTCTCCCAACAGCATGACACACA...CTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp TCTCTCTGCAACTCCCTTAATTTAGCAGCCAAACACATTGGGTTCCTTCACAGAGGCACCCGTGCACACTaGGTTCACCCTTACGGAGCT +
Preference number: 4 (lower is better)
Translates to: SLCNSLNLAAKHIGFLHRGTRAH*VHPYGA
Trigger: AGCTCCGTAAGGGTGAACCCAGTGTGCACGGGTGCC...TCTGTGAAGGAACCCAATGTGTTTGGCTGCTAAATTAAGGGAGTTGCAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 72 bp CTGCATTTTAACAAGTCCCCTGGTGCACAAGGAAATTaGAGACCCACTGTGCCCGACAGCTTGTGCACATGG +
Preference number: 4 (lower is better)
Translates to: LHFNKSPGAQGN*RPTVPDSLCTW
Trigger: CCATGTGCACAAGCTGTCGGGCACAGTGGGTCTCAAATTTCCTTGTGCACCAGGGGACTTGTTAAAATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCCCCAGGCTGTCTTGTTaGCGTCCTGCTTGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMAPRLSC*RPACRS
Trigger: GCTTCTACAAGCAGGACGTCAACAAGACAGCCTGGG...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAGCGAAGATCTCGGACTaGAAGGGTCGGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKAKISD*KGRLSF
Trigger: GAAGCTGAGCCGACCCTTTCAGTCCGAGATCTTCGC...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGGAAACTTCACAGATTTaGGAAAACTCTGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLETSQI*ENSVGG
Trigger: CCCTCCCACAGAGTTTTCTCAAATCTGTGAAGTTTC...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCTGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCACTCTGCTGCCGATTGTaGAATCATCGGCCTCTTACC +
Preference number: 4 (lower is better)
Translates to: AVFQEGLSLVVTNTGPWALCCRL*NHRPLT
Trigger: GGTAAGAGGCCGATGATTTCACAATCGGCAGCAGAG...TGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATAACCTGAATAGCCATAGGCCCCGCTaGCGACGTGCGTCGGGGACA +
Preference number: 4 (lower is better)
Translates to: PAVVSYLDCLSLTQNNLNSHRPR*RRASGT
Trigger: TGTCCCCGACGCACGTCGGCAGCGGGGCCTATGGCT...ATTCAGGTTATTTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTATGACGTTCTCATGCTaGATGTGCTTCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGMTFSC*MCFSSS
Trigger: GCTGCTGCTGAAGCACATGCAGCATGAGAACGTCAT...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TCTCTCTGCAACTCCCTTAATTTAGCAGCCAAACACATTGGGTTCCTTCACAGAAGTCATCTCGGCGTCTaGATGTCGCGCCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SLCNSLNLAAKHIGFLHRSHLGV*MSRQPK
Trigger: TTTGGGCTGGCGCGACATGCAGACGCCGAGATGACT...TCTGTGAAGGAACCCAATGTGTTTGGCTGCTAAATTAAGGGAGTTGCAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTACAAGGGGTTTTGAATaGCAGGCCAAGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLTRGFE*QAKKEG
Trigger: GCCTTCCTTCTTGGCCTGGCATTCAAAACCCCTTGT...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGCCTTTAACCTGTGAATaGAGAATGAACCTTACGGTG +
Preference number: 4 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRPLTCE*RMNLTV
Trigger: CACCGTAAGGTTCATTCTGCATTCACAGGTTAAAGG...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCAACGGATCTCTTTACTaGAGGACTTGTCAAGACCTT +
Preference number: 4 (lower is better)
Translates to: CSKESSNGCWASVSSSGSNGSLY*RTCQDL
Trigger: AAGGTCTTGACAAGTCCTGCAGTAAAGAGATCCGTT...GGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CCA 90 bp TCTCTCTGCAACTCCCTTAATTTAGCAGCCAAACACATTGGGTTCCTTCACAGACTTCCTGGGGGTCTGTaGCAGGGACTGGATGTAGGA +
Preference number: 4 (lower is better)
Translates to: SLCNSLNLAAKHIGFLHRLPGGL*QGLDVG
Trigger: TCCTACATCCAGTCCCTGCCACAGACCCCCAGGAAG...TCTGTGAAGGAACCCAATGTGTTTGGCTGCTAAATTAAGGGAGTTGCAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AAACAGAGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGAGCAGCCAAACACATTaGGTTCCTTCACAGAGCACA +
Preference number: 4 (lower is better)
Translates to: KQRPWTQSAVRVSDWREESSQTH*VPSQST
Trigger: TGTGCTCTGTGAAGGAACCCAATGTGTTTGGCTGCT...CTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CATTCATCCACTGTGAGTTTCTCGTGTTCTAAGGAATCATCAAACGGCTGCTGGGTAAGGGTCTCAGACTaGCGTGAAGAGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: HSSTVSFSCSKESSNGCWVRVSD*REEGRL
Trigger: CAGCCTTCCCTCTTCACGCCAGTCTGAGACCCTTAC...CCAGCAGCCGTTTGATGATTCCTTAGAACACGAGAAACTCACAGTGGATGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CCA 90 bp AGAGCTAGTTTCTCCCAACCGACATCTTTGAATTCTGCATCTACTAGGCCCATTGAATGGAGAGGAGAATaGAGGGCCTTCCACGCACGG +
Preference number: 4 (lower is better)
Translates to: RASFSQPTSLNSASTRPIEWRGE*RAFHAR
Trigger: CCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCATTC...AATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AGAGCTAGTTTCTCCCAACCGACATCTTTGAATTCTGCATCTACTAGGCCCATTGAGCAGGAGAATCCCTaGCACCACCCTTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RASFSQPTSLNSASTRPIEQENP*HHPCSS
Trigger: ACTGGAGCAAGGGTGGTGCCAGGGATTCTCCTGCTC...AATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCTGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAAGGCCTTTGAGCATCTaGTACACCAGGTACTGGATC +
Preference number: 4 (lower is better)
Translates to: AVFQEGLSLVVTNTGPWARPLSI*YTRYWI
Trigger: GATCCAGTACCTGGTGTATCAGATGCTCAAAGGCCT...TGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTCCCAACCGACATCTTTaGATTCTGCATCTACTAGGC +
Preference number: 4 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGPNRHL*ILHLLG
Trigger: GCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGG...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp TTCTGCCTGTGCAGCTCGCAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTTTTTCCTTGGGGCAGTaGGAATTCTCAGGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: FCLCSSQSPSLLLFHILIFSLGQ*EFSGGL
Trigger: TAAGCCTCCTGAGAATTCTCACTGCCCCAAGGAAAA...AATCAAGATATGAAACAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CATTCATCCACTGTGAGTTTCTCGTGTTCTAAGGAATCATCAAACGGCTGCTGGCCTAAGGTAGAGCCTTaGAGGCCAAGGAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: HSSTVSFSCSKESSNGCWPKVEP*RPRRME
Trigger: CTCCATTCTCCTTGGCCTTCAAGGCTCTACCTTAGG...CCAGCAGCCGTTTGATGATTCCTTAGAACACGAGAAACTCACAGTGGATGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR TCA 90 bp AAACAGAGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGACCTCCACCGCCTTTTaGAGAAACTTCACAGATTTG +
Preference number: 4 (lower is better)
Translates to: KQRPWTQSAVRVSDWREETSTAF*RNFTDL
Trigger: CAAATCTGTGAAGTTTCTTCAAAAGGCGGTGGAGGT...CTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp AAGCTAAAAAGAGCCAAGGAAGGATTCTTCCCCAGAGCCTTCAAAGGGACCACAGTGCCAAGTGAAAGTTaGGCCATGCCCTCATCCAAA +
Preference number: 4 (lower is better)
Translates to: KLKRAKEGFFPRAFKGTTVPSES*AMPSSK
Trigger: TTTGGATGAGGGCATGGCTCAACTTTCACTTGGCAC...TGTGGTCCCTTTGAAGGCTCTGGGGAAGAATCCTTCCTTGGCTCTTTTTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAAGGTCGAGGCTACAGTaGGCTGTGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKRSRLQ*AVIAPL
Trigger: CAGTGGTGCAATCACAGCTCACTGTAGCCTCGACCT...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGCCAATGACGTTCTCATaGTGCATGTGCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMPMTFS*CMCFSS
Trigger: GCTGCTGAAGCACATGCAGCATGAGAACGTCATTGG...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TCTCTCTGCAACTCCCTTAATTTAGCAGCCAAACACATTGGGTTCCTTCACAGAGAATCATCAAACGGCTaGTGGGCCTCCGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLCNSLNLAAKHIGFLHRESSNG*WASVSS
Trigger: GGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTC...TCTGTGAAGGAACCCAATGTGTTTGGCTGCTAAATTAAGGGAGTTGCAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTGACCCTTCTGTCCTCTaGTTGAAAGGCTGTATTCCA +
Preference number: 4 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGDPSVL*LKGCIP
Trigger: TGGAATACAGCCTTTCAAGCAGAGGACAGAAGGGTC...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAATGCAATCGCACCAGCTaGAGCTCTCTCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKCNRTS*SSLCNS
Trigger: GGAGTTGCAGAGAGAGCTGCAGCTGGTGCGATTGCA...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAGCAAGAGCCCATTTCTaGCTGTGCAGCTCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKARAHF*LCSSQS
Trigger: AGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGC...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TCTCTCTGCAACTCCCTTAATTTAGCAGCCAAACACATTGGGTTCCTTCACAGAGGGAGCAGAACGGTTTaGCATCAAGCCAGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: SLCNSLNLAAKHIGFLHRGSRTV*HQARQE
Trigger: CTCTTGCCTGGCTTGATGGCAAACCGTTCTGCTCCC...TCTGTGAAGGAACCCAATGTGTTTGGCTGCTAAATTAAGGGAGTTGCAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCACAGATGGTAACAAATaGACAATAGGTATCCACCAT +
Preference number: 4 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSTDGNK*TIGIHH
Trigger: ATGGTGGATACCTATTGTGCATTTGTTACCATCTGT...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TCTCTCTGCAACTCCCTTAATTTAGCAGCCAAACACATTGGGTTCCTTCACAGAACAGGCGTGAGCTACTaGGACCGGCCTGTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: SLCNSLNLAAKHIGFLHRTGVSY*DRPVVY
Trigger: ATAAACCACAGGCCGGTCGCAGTAGCTCACGCCTGT...TCTGTGAAGGAACCCAATGTGTTTGGCTGCTAAATTAAGGGAGTTGCAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp AAGCTAAAAAGAGCCAAGGAAGGATTCTTCCCCAGAGCCTTCAAAGGGACCACATCCTGCTGGGCTCTCTaGCACCTTCCATATGACATT +
Preference number: 4 (lower is better)
Translates to: KLKRAKEGFFPRAFKGTTSCWAL*HLPYDI
Trigger: AATGTCATATGGAAGGTGGCAGAGAGCCCAGCAGGA...TGTGGTCCCTTTGAAGGCTCTGGGGAAGAATCCTTCCTTGGCTCTTTTTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCGACAGCTTGTGCACATaGAAATTTGTTCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFDSLCT*KFVLPK
Trigger: CTTTGGCAGAACAAATTTCCATGTGCACAAGCTGTC...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GCTGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCACTTAAAAATGCTGTCTaGGCCTGCAGGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: AVFQEGLSLVVTNTGPWALKNAV*ACRVAH
Trigger: ATGAGCCACCCTGCAGGCCCAGACAGCATTTTTAAG...TGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGCTTAAAAATGCTGTCTaGGCCTGCAGGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMLKNAV*ACRVAH
Trigger: ATGAGCCACCCTGCAGGCCCAGACAGCATTTTTAAG...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCGTGAAGAGGGAAGGCTaGGCAACCCTTGAATCCAAG +
Preference number: 4 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMAVKREG*ATLESK
Trigger: CTTGGATTCAAGGGTTGCCCAGCCTTCCCTCTTCAC...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CAAGCTGGGTACAGTGCTCAAGCCTACTTGGGTTCCAATCTGACTCCACCACTTGCTAGACTTTTTCCTTaGGGCAGTGAGAATTCTCAG +
Preference number: 4 (lower is better)
Translates to: QAGYSAQAYLGSNLTPPLARLFP*GSENSQ
Trigger: CTGAGAATTCTCACTGCCCCAAGGAAAAAGTCTAGC...AAGTGGTGGAGTCAGATTGGAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGAGCTATAGCATTGCTTaGGGCCATGGAAAAACAGTT +
Preference number: 4 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLSYSIA*GHGKTV
Trigger: AACTGTTTTTCCATGGCCCCAAGCAATGCTATAGCT...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTTCCAGTACACACCCATaGGTGCTCAATGAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGSSTHP*VLNEEV
Trigger: CACTTCTTCATTGAGCACCCATGGGTGTGTACTGGA...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 72 bp TTCCCACATAAGGAGAAGGACCCTTCTGTCCTCTGCTaGAAAGGCTGTATTCCAAGAAGGGCTGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: FPHKEKDPSVLC*KGCIPRRAEFG
Trigger: ACCAAACTCAGCCCTTCTTGGAATACAGCCTTTCAAGCAGAGGACAGAAGGGTCCTTCTCCTTATGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 72 bp TTCTGCCTGTGCAGCTCGCAGTCTCCGAGCCTGCTGTaGTTTCATATCTTGATTGCTTATCACTCACCCAAA +
Preference number: 4 (lower is better)
Translates to: FCLCSSQSPSLL*FHILIAYHSPK
Trigger: TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GGAAATTTGTTCTGCCAAAGTTTCTCAGATAAAAACAGAGAGGTTCTAGCCACTGCCCGTGGGAACAGCTaGGTGAAATCCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GNLFCQSFSDKNREVLATARGNS*VKSFLG
Trigger: CCCCAGGAAGGATTTCACTCAGCTGTTCCCACGGGC...AGTGGCTAGAACCTCTCTGTTTTTATCTGAGAAACTTTGGCAGAACAAATTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp AGAGCTAGTTTCTCCCAACCGACATCTTTGAATTCTGCATCTACTAGGCCCATTTCCGGGCAATGGGGCTaGAGTTCACAATCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RASFSQPTSLNSASTRPISGQWG*SSQSPC
Trigger: ACAAGGAGATTGTGAACTTCAGCCCCATTGCCCGGA...AATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGCCCAACCGACATCTTTaGATTCTGCATCTACTAGGC +
Preference number: 4 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMPNRHL*ILHLLG
Trigger: GCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGG...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCTCTCGAACTATGGTCTaGTATCCATCAGAATCACTA +
Preference number: 4 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFSRTMV*YPSESL
Trigger: TAGTGATTCTGATGGATATCAGACCATAGTTCGAGA...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp AGAGCTAGTTTCTCCCAACCGACATCTTTGAATTCTGCATCTACTAGGCCCATTCTCTGCTGCCGATTGTaGAATCATCGGCCTCTTACC +
Preference number: 4 (lower is better)
Translates to: RASFSQPTSLNSASTRPILCCRL*NHRPLT
Trigger: GGTAAGAGGCCGATGATTTCACAATCGGCAGCAGAG...AATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CATTCATCCACTGTGAGTTTCTCGTGTTCTAAGGAATCATCAAACGGCTGCTGGAGGTTCAAGCAATTCTaGCTCAGCCTCCCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: HSSTVSFSCSKESSNGCWRFKQF*LSLPSS
Trigger: ACTACTCGGGAGGCTGAGGCAGAATTGCTTGAACCT...CCAGCAGCCGTTTGATGATTCCTTAGAACACGAGAAACTCACAGTGGATGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR GCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATTACACAGGCCATGTaGCCACTGGGCAAGACCCAA +
Preference number: 4 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKITQAM*PLGKTQ
Trigger: TTGGGTCTTGCCCAGTGGGCACATGGCCTGTGTAAT...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TTCTGCCTGTGCAGCTCGCAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGTGAGGACAACTTGCTaGCATCTTCAGTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: FCLCSSQSPSLLLFHILIVRTTC*HLQFDG
Trigger: TCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCAC...AATCAAGATATGAAACAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTCCTCAAAAGAGGGAATaGAGGGTACACTTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLPQKRE*RVHLLL
Trigger: TAAGAGCAAGTGTACCCTCCATTCCCTCTTTTGAGG...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGTCCAGTACACACCCATaGGTGCTCAATGAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMSSTHP*VLNEEV
Trigger: CACTTCTTCATTGAGCACCCATGGGTGTGTACTGGA...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp AAGCTAAAAAGAGCCAAGGAAGGATTCTTCCCCAGAGCCTTCAAAGGGACCACAGGTAATCTTTCCCCTTaGACAGAGTTTTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: KLKRAKEGFFPRAFKGTTGNLSP*TEFSLS
Trigger: TGACAGGGAAAACTCTGTTCAAGGGGAAAGATTACC...TGTGGTCCCTTTGAAGGCTCTGGGGAAGAATCCTTCCTTGGCTCTTTTTAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000211287.9
CDS-3UTR TCA 90 bp ACTAGGCTTGGGTCAGGGCGAGAGGTCCTCATTCAAATGCACATTCTAAGGTCTCCTCCTATAGGTTTTTaGTTTAGGCCTCCCAACAAA +
Preference number: 4 (lower is better)
Translates to: TRLGSGREVLIQMHILRSPPIGF*FRPPNK
Trigger: TTTGTTGGGAGGCCTAAATCAAAAACCTATAGGAGG...AGACCTTAGAATGTGCATTTGAATGAGGACCTCTCGCCCTGACCCAAGCCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTCCTCCTATAGGTTTTTaGTTTAGGCCTCCCAACAAA +
Preference number: 4 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGPPIGF*FRPPNK
Trigger: TTTGTTGGGAGGCCTAAATCAAAAACCTATAGGAGG...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATAACCTGAATGGGACACGTAGGTCTTaGGCAGCTCCCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PAVVSYLDCLSLTQNNLNGTRRS*AAPRLS
Trigger: AGACAGCCTGGGAGCTGCCCAAGACCTACGTGTCCC...ATTCAGGTTATTTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAACATATGACATTGGCCTaGTCGGGGCAAAGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKHMTLA*SGQRSD
Trigger: GTCACTTCTTTGCCCCGACCAGGCCAATGTCATATG...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp TCTCTCTGCAACTCCCTTAATTTAGCAGCCAAACACATTGGGTTCCTTCACAGATGCTGTCTGTTTTCATaGATGACTCAGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLCNSLNLAAKHIGFLHRCCLFS*MTQAPA
Trigger: TGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCA...TCTGTGAAGGAACCCAATGTGTTTGGCTGCTAAATTAAGGGAGTTGCAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CATTCATCCACTGTGAGTTTCTCGTGTTCTAAGGAATCATCAAACGGCTGCTGGCTGTCTGTAGTGAGTTaGATCATTTCCCCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: HSSTVSFSCSKESSNGCWLSVVS*IISPWN
Trigger: ATTCCAGGGGGAAATGATTCAACTCACTACAGACAG...CCAGCAGCCGTTTGATGATTCCTTAGAACACGAGAAACTCACAGTGGATGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR TCA 90 bp AGAGCTAGTTTCTCCCAACCGACATCTTTGAATTCTGCATCTACTAGGCCCATTTCACCCAAAATAACCTaGATGCAATCGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RASFSQPTSLNSASTRPISPKIT*MQSHQL
Trigger: CAGCTGGTGCGATTGCATTCAGGTTATTTTGGGTGA...AATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTAAGACCTTTAACCTGTaGATGCAGAATGAACCTTAC +
Preference number: 4 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLKTFNL*MQNEPY
Trigger: GTAAGGTTCATTCTGCATTCACAGGTTAAAGGTCTT...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATAACCTGAATTCCACCAAGAATACCTaGGCCCACATCTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PAVVSYLDCLSLTQNNLNSTKNT*AHISPS
Trigger: GGAGGGGGAGATGTGGGCTCAGGTATTCTTGGTGGA...ATTCAGGTTATTTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp AGAGCTAGTTTCTCCCAACCGACATCTTTGAATTCTGCATCTACTAGGCCCATTTTTCAATGTGCCAAGTaGAAGTTGAGCCATGCCCTC +
Preference number: 4 (lower is better)
Translates to: RASFSQPTSLNSASTRPIFQCAK*KLSHAL
Trigger: GAGGGCATGGCTCAACTTTCACTTGGCACATTGAAA...AATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATCCCCATGATCTTCTaGAGATCCGTCTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKIPMIF*RSVCMK
Trigger: CTTCATGCAGACGGATCTGCAGAAGATCATGGGGAT...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AGAGCTAGTTTCTCCCAACCGACATCTTTGAATTCTGCATCTACTAGGCCCATTATGGGCAGTTTAACGTaGCCTGTTAGGATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RASFSQPTSLNSASTRPIMGSLT*PVRIRA
Trigger: AGCTCTGATCCTAACAGGCCACGTTAAACTGCCCAT...AATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAAGCAGCCAAACACATTaGGTTCCTTCACAGAGCACA +
Preference number: 4 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKSSQTH*VPSQST
Trigger: TGTGCTCTGTGAAGGAACCCAATGTGTTTGGCTGCT...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCCCCACAGCAGGAGAATaGACTTGTTTCCTATTACAC +
Preference number: 4 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMAPTAGE*TCFLLH
Trigger: GTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGG...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
3UTR CAA 72 bp TGGGAGCTGATGAGATTAGAGAGAACACAAGGGGTTTaGAATGCCAGGCCAAGAAGGAAGGCTAGACTTTTT +
Preference number: 4 (lower is better)
Translates to: WELMRLERTQGV*NARPRRKARLF
Trigger: AAAAAGTCTAGCCTTCCTTCTTGGCCTGGCATTCAAAACCCCTTGTGTTCTCTCTAATCTCATCAGCTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp GCTGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCATGGAACCTGAGAATGTaGCTTTATTTGGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: AVFQEGLSLVVTNTGPWAWNLRM*LYLELE
Trigger: CTCTAGTTCCAAATAAAGTCACATTCTCAGGTTCCA...TGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTCAAATCAAGTATGACTaGAATCCACTAAATGTCTCG +
Preference number: 4 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLQIKYD*NPLNVS
Trigger: CGAGACATTTAGTGGATTTCAGTCATACTTGATTTG...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp ACTAGGCTTGGGTCAGGGCGAGAGGTCCTCATTCAAATGCACATTCTAAGGTCTCAAATCAAGTATGACTaGAATCCACTAAATGTCTCG +
Preference number: 4 (lower is better)
Translates to: TRLGSGREVLIQMHILRSQIKYD*NPLNVS
Trigger: CGAGACATTTAGTGGATTTCAGTCATACTTGATTTG...AGACCTTAGAATGTGCATTTGAATGAGGACCTCTCGCCCTGACCCAAGCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATAACCTGAATAATGCTGTCTGGGCCTaGAGGGTGGCTCATGCCTAT +
Preference number: 4 (lower is better)
Translates to: PAVVSYLDCLSLTQNNLNNAVWA*RVAHAY
Trigger: ATAGGCATGAGCCACCCTGCAGGCCCAGACAGCATT...ATTCAGGTTATTTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp CCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATAACCTGAATACAGGCGTGAGCTACTaGGACCGGCCTGTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: PAVVSYLDCLSLTQNNLNTGVSY*DRPVVY
Trigger: ATAAACCACAGGCCGGTCGCAGTAGCTCACGCCTGT...ATTCAGGTTATTTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp TCTCTCTGCAACTCCCTTAATTTAGCAGCCAAACACATTGGGTTCCTTCACAGAAGGCTATGTGTGTCATaGTGTTGGGAGAAAATGGGT +
Preference number: 4 (lower is better)
Translates to: SLCNSLNLAAKHIGFLHRRLCVS*CWEKMG
Trigger: ACCCATTTTCTCCCAACAGCATGACACACATAGCCT...TCTGTGAAGGAACCCAATGTGTTTGGCTGCTAAATTAAGGGAGTTGCAGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATAACCTGAATGTCAGGTCAAAGCTCTaGAGAGCTGTGCCATCTCCC +
Preference number: 4 (lower is better)
Translates to: PAVVSYLDCLSLTQNNLNVRSKL*RAVPSP
Trigger: GGGAGATGGCACAGCTCTCCAGAGCTTTGACCTGAC...ATTCAGGTTATTTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp AAACAGAGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGAAATGTCTCGAACTATaGTCTGATATCCATCAGAAT +
Preference number: 4 (lower is better)
Translates to: KQRPWTQSAVRVSDWREEKCLEL*SDIHQN
Trigger: ATTCTGATGGATATCAGACCATAGTTCGAGACATTT...CTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCTCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GGAAATTTGTTCTGCCAAAGTTTCTCAGATAAAAACAGAGAGGTTCTAGCCACTCCAATGACGTTCTCATaGTGCATGTGCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GNLFCQSFSDKNREVLATPMTFS*CMCFSS
Trigger: GCTGCTGAAGCACATGCAGCATGAGAACGTCATTGG...AGTGGCTAGAACCTCTCTGTTTTTATCTGAGAAACTTTGGCAGAACAAATTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GGAAATTTGTTCTGCCAAAGTTTCTCAGATAAAAACAGAGAGGTTCTAGCCACTAGGTTCAAGCAATTCTaGCTCAGCCTCCCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: GNLFCQSFSDKNREVLATRFKQF*LSLPSS
Trigger: ACTACTCGGGAGGCTGAGGCAGAATTGCTTGAACCT...AGTGGCTAGAACCTCTCTGTTTTTATCTGAGAAACTTTGGCAGAACAAATTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp GGAAATTTGTTCTGCCAAAGTTTCTCAGATAAAAACAGAGAGGTTCTAGCCACTGGTAGTGACAAATACTaGTCCTTGGGCAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GNLFCQSFSDKNREVLATGSDKY*SLGSVW
Trigger: CCAGACACTGCCCAAGGACCAGTATTTGTCACTACC...AGTGGCTAGAACCTCTCTGTTTTTATCTGAGAAACTTTGGCAGAACAAATTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAATTTGAGAAAACTCTGTaGGAGGGGCTGAGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKFEKTL*EGLRFN
Trigger: ATTAAACCTCAGCCCCTCCCACAGAGTTTTCTCAAA...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR GCA 90 bp GGAAATTTGTTCTGCCAAAGTTTCTCAGATAAAAACAGAGAGGTTCTAGCCACTGACCCTTCTGTCCTCTaGTTGAAAGGCTGTATTCCA +
Preference number: 4 (lower is better)
Translates to: GNLFCQSFSDKNREVLATDPSVL*LKGCIP
Trigger: TGGAATACAGCCTTTCAAGCAGAGGACAGAAGGGTC...AGTGGCTAGAACCTCTCTGTTTTTATCTGAGAAACTTTGGCAGAACAAATTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATAACCTGAATACGACCCCAGCAGAGTaGATGTACTTAAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: PAVVSYLDCLSLTQNNLNTTPAE*MYLRPL
Trigger: CAAAGGCCTTAAGTACATCCACTCTGCTGGGGTCGT...ATTCAGGTTATTTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR TCA 90 bp CCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATAACCTGAATTGGAACCTGAGAATGTaGCTTTATTTGGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: PAVVSYLDCLSLTQNNLNWNLRM*LYLELE
Trigger: CTCTAGTTCCAAATAAAGTCACATTCTCAGGTTCCA...ATTCAGGTTATTTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CCA 90 bp CCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATAACCTGAATAAATGTCTCGAACTATaGTCTGATATCCATCAGAAT +
Preference number: 4 (lower is better)
Translates to: PAVVSYLDCLSLTQNNLNKCLEL*SDIHQN
Trigger: ATTCTGATGGATATCAGACCATAGTTCGAGACATTT...ATTCAGGTTATTTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS CCA 90 bp CCGGATGAGGCTCATCCCGGGCACCCGATCTCGGCGGCCCCAGCGTaGCGGCTGCGTTCGCGGCCCAACGGGCTCCCAGCGCCCCGACCC +
Preference number: 5 (lower is better)
Translates to: PDEAHPGHPISAAPA*RLRSRPNGLPAPRP
Trigger: GGGTCGGGGCGCTGGGAGCCCGTTGGGCCGCGAACGCAGCCGCCACGCTGGGGCCGCCGAGATCGGGTGCCCGGGATGAGCCTCATCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS GCA 90 bp CTGACCGCTTGTCGATGGCCGAGCACACGGAGCCATAGGCCCCGCTaGCGACGTGCGTCGGGGACACGTAGGTCTTGGGCAGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LTACRWPSTRSHRPR*RRASGTRRSWAAPR
Trigger: CCTGGGAGCTGCCCAAGACCTACGTGTCCCCGACGCACGTCGGCAGCGGGGCCTATGGCTCCGTGTGCTCGGCCATCGACAAGCGGTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000211287.9
ENST00000373766.9
ENST00000476951.5
CDS-3UTR CAA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGTTCTCCCCTGACCGCTaGTCGATGGCCGAGCACACG +
Preference number: 5 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLFSPDR*SMAEHT
Trigger: CGTGTGCTCGGCCATCGACAAGCGGTCAGGGGAGAA...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GCTGCAGGCGGAGGCGAGGAAGCCCGAGGCCCCAGCTCTTACGCTTCCATTCATGCGGCCGTCAGGCGCTaGTCCACGTCTAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AAGGGEEARGPSSYASIHAAVRR*STSSSS
Trigger: GCTGGAGCTAGACGTGGACAAGCGCCTGACGGCCGC...ATGAATGGAAGCGTAAGAGCTGGGGCCTCGGGCTTCCTCGCCTCCGCCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR CAA 90 bp GGGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGTCAGAATCACTAGGCTaGGGTCAGGGCGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GAAPPQSTPGKPCPGTPLSESLG*GQGERS
Trigger: GGACCTCTCGCCCTGACCCAAGCCTAGTGATTCTGA...CAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS CCA 90 bp CGACGGGATCCACGGCAGGGCGGGAGTCTCACTCTGTCTGCAACTTaGCGAGCCACCTCCCCCTCTTGGGGCCTCGGTGTACTCGTCTGT +
Preference number: 5 (lower is better)
Translates to: RRDPRQGGSLTLSAT*RATSPSWGLGVLVC
Trigger: ACAGACGAGTACACCGAGGCCCCAAGAGGGGGAGGTGGCTCGCCAAGTTGCAGACAGAGTGAGACTCCCGCCCTGCCGTGGATCCCGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS-3UTR CAA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCCATTTCTGTCTCCCCTaGTGCTGCCCCTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFHFCLP*CCPSLG
Trigger: CCCCAGTGAGGGGCAGCACAAGGGGAGACAGAAATG...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS GCA 90 bp CTCATTGCGACGGGATCCACGGCAGGGCGGGAGTCTCACTCTGTCTaGAACTTGGCGAGCCACCTCCCCCTCTTGGGGCCTCGGTGTACT +
Preference number: 5 (lower is better)
Translates to: LIATGSTAGRESHSV*NLASHLPLLGPRCT
Trigger: AGTACACCGAGGCCCCAAGAGGGGGAGGTGGCTCGCCAAGTTGCAGACAGAGTGAGACTCCCGCCCTGCCGTGGATCCCGTCGCAATGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS-3UTR CAA 90 bp CCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGGTCGGCTCAGCTTCTaGATGGCCACCTTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: PLWREGKGPTCRRFSRWAGRLSF*MATFSP
Trigger: AGGGGAGAAGGTGGCCATCAAGAAGCTGAGCCGACC...TGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GCCCACTCAGCCCCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCAGGGAGCAGAACGGTTaGCCATCAAGCCAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: AHSAPLWREGKGPTCRRFREQNG*PSSQAR
Trigger: TCTTGCCTGGCTTGATGGCAAACCGTTCTGCTCCCT...GAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGGGGCTGAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCAGTGCTCAAGCCTACTaGGGTTCCAATCTGACTCCA +
Preference number: 5 (lower is better)
Translates to: GQHHPNPRQASPALGHRCSAQAY*GSNLTP
Trigger: TGGAGTCAGATTGGAACCCAAGTAGGCTTGAGCACT...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCAGAACACAAGGGGTTTaGAATGCCAGGCCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: GQHHPNPRQASPALGHRCRTQGV*NARPRR
Trigger: CCTTCTTGGCCTGGCATTCAAAACCCCTTGTGTTCT...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCGCGGCCGTCAGGCGCTaGTCCACGTCTAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSAAVRR*STSSSS
Trigger: GCTGGAGCTAGACGTGGACAAGCGCCTGACGGCCGC...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp CCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGAAGGCCAAGCCTACTaGGGGAGAGGCAATATCGGG +
Preference number: 5 (lower is better)
Translates to: PLWREGKGPTCRRFSRWAEGQAY*GRGNIG
Trigger: CCCGATATTGCCTCTCCCCAAGTAGGCTTGGCCTTC...TGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACCTGAGAGGGGCCCTGTaGACACTCACATGCCACCCG +
Preference number: 5 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNLRGAL*TLTCHP
Trigger: CGGGTGGCATGTGAGTGTCAACAGGGCCCCTCTCAG...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp TGGGCCTCCGTCTCTTCCTCAGGGTCCCGGAAGGGTTCAAAGAAGGGATGGGTGGGTCGGCTCAGCTTCTaGATGGCCACCTTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: WASVSSSGSRKGSKKGWVGRLSF*MATFSP
Trigger: AGGGGAGAAGGTGGCCATCAAGAAGCTGAGCCGACC...CACCCATCCCTTCTTTGAACCCTTCCGGGACCCTGAGGAAGAGACGGAGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS-3UTR CAA 90 bp CCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAAAGGCTGGGCAACCCTaGAATCCAAGCTGGGTACAG +
Preference number: 5 (lower is better)
Translates to: PLWREGKGPTCRRFSRWAKAGQP*NPSWVQ
Trigger: CTGTACCCAGCTTGGATTCAAGGGTTGCCCAGCCTT...TGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GCAGCTGCCCAGCTGAGCAGGGACCCCGCAGGAGGAACCAGAGCAGGAGAATCCGAATGGAGGGTACACTaGCTCTTAGGAAATGTCCCC +
Preference number: 5 (lower is better)
Translates to: AAAQLSRDPAGGTRAGESEWRVH*LLGNVP
Trigger: GGGGACATTTCCTAAGAGCAAGTGTACCCTCCATTC...GGATTCTCCTGCTCTGGTTCCTCCTGCGGGGTCCCTGCTCAGCTGGGCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGTGGTGCACACTGGGCTaGCCCTTACGGGGGCTATTC +
Preference number: 5 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKWCTLG*PLRGLF
Trigger: GAATAGCCCCCGTAAGGGCAAGCCCAGTGTGCACCA...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp TGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTCTCCGATGGTGCACACTGGGCTaGCCCTTACGGGGGCTATTC +
Preference number: 5 (lower is better)
Translates to: CHQARQEPISACAARSLRWCTLG*PLRGLF
Trigger: GAATAGCCCCCGTAAGGGCAAGCCCAGTGTGCACCA...TCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp TGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTCTCCGATCCCTGGCACCACCCTaGCTCCAGTACACACCCATG +
Preference number: 5 (lower is better)
Translates to: CHQARQEPISACAARSLRSLAPP*LQYTPM
Trigger: CATGGGTGTGTACTGGAGCAAGGGTGGTGCCAGGGA...TCGGAGACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp TGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCTTCTCCCCTGACCGCTaGTCGATGGCCGAGCACACG +
Preference number: 5 (lower is better)
Translates to: CSKESSNGCWASVSSSGSFSPDR*SMAEHT
Trigger: CGTGTGCTCGGCCATCGACAAGCGGTCAGGGGAGAA...GGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373759.1
ENST00000373766.9
CDS-3UTR CAA 90 bp GGGCAGCACCACCCCAATCCACGCCAGGCAAGCCCTGCCCTGGGACACCGCTGCAAGTCCATAGTTTACTaGAGGGTTCACTCTGTGTTA +
Preference number: 5 (lower is better)
Translates to: GQHHPNPRQASPALGHRCKSIVY*RVHSVL
Trigger: TAACACAGAGTGAACCCTCAAGTAAACTATGGACTT...GCAGCGGTGTCCCAGGGCAGGGCTTGCCTGGCGTGGATTGGGGTGGTGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS CCA 90 bp GAGGATCTGCCCGATGAACTCTGGGGTCTTGCAAGTGTACAGTCCTaGAGAACCAGGCCCAGTCCCAACTCAACCCCCAGAGACCTCACT +
Preference number: 5 (lower is better)
Translates to: EDLPDELWGLASVQS*RTRPSPNSTPRDLT
Trigger: AGTGAGGTCTCTGGGGGTTGAGTTGGGACTGGGCCTGGTTCTCCAGGACTGTACACTTGCAAGACCCCAGAGTTCATCGGGCAGATCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS-3UTR CAA 90 bp TTCTGCCTGTGCAGCTCGCAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCGGCCGTCAGGCGCTaGTCCACGTCTAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: FCLCSSQSPSLLLFHILIAAVRR*STSSSS
Trigger: GCTGGAGCTAGACGTGGACAAGCGCCTGACGGCCGC...AATCAAGATATGAAACAACAGCAGGCTCGGAGACTGCGAGCTGCACAGGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp CCACTCTGGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAACTGTGCCCGACAGCTaGTGCACATGGAAATTTGTT +
Preference number: 5 (lower is better)
Translates to: PLWREGKGPTCRRFSRWATVPDS*CTWKFV
Trigger: AACAAATTTCCATGTGCACAAGCTGTCGGGCACAGT...TGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCCAGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGGGACTCCCCAGCTCCTaGACAGCAGGGCCATTCTGT +
Preference number: 5 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRGLPSS*TAGPFC
Trigger: ACAGAATGGCCCTGCTGTCAAGGAGCTGGGGAGTCC...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCCCATTCACGCACAGGTATTaGCTCACAGTGGGCAATGGG +
Preference number: 5 (lower is better)
Translates to: EGEAKPHTKCCPQRACSPFTHRY*LTVGNG
Trigger: CCCATTGCCCACTGTGAGCAAATACCTGTGCGTGAA...TGGGCTGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp TCGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGCATTTCTGTCTCCCCTaGTGCTGCCCCTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: SCSKESSNGCWASVSSSGHFCLP*CCPSLG
Trigger: CCCCAGTGAGGGGCAGCACAAGGGGAGACAGAAATG...CCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CAA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGTCCCTGGCACCACCCTaGCTCCAGTACACACCCATG +
Preference number: 5 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRSLAPP*LQYTPM
Trigger: CATGGGTGTGTACTGGAGCAAGGGTGGTGCCAGGGA...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS CCA 90 bp CTCGGTGTACTCGTCTGTAACAGTGAGGATCTGCCCGATGAACTCTaGGGTCTTGCAAGTGTACAGTCCTGGAGAACCAGGCCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: LGVLVCNSEDLPDEL*GLASVQSWRTRPSP
Trigger: GGGACTGGGCCTGGTTCTCCAGGACTGTACACTTGCAAGACCCCAGAGTTCATCGGGCAGATCCTCACTGTTACAGACGAGTACACCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS-3UTR CAA 90 bp GGCGGGAAGGAAAGGGCCCCACCTGCAGGCGATTCTCCAGATGGGCAGTTTAACATGTGTGTCATGCTGTaGGGAGAAAATGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: GGKERAPPAGDSPDGQFNMCVML*GENGSC
Trigger: GCAGGACCCATTTTCTCCCAACAGCATGACACACAT...GTTAAACTGCCCATCTGGAGAATCGCCTGCAGGTGGGGCCCTTTCCTTCCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp ACACCGCTGCTGTCTGTTTTCATGGATGACTCAGGCCCCAGCAAAGATACTCTTTTCTCCCCTGACCGCTaGTCGATGGCCGAGCACACG +
Preference number: 5 (lower is better)
Translates to: TPLLSVFMDDSGPSKDTLFSPDR*SMAEHT
Trigger: CGTGTGCTCGGCCATCGACAAGCGGTCAGGGGAGAA...AAGAGTATCTTTGCTGGGGCCTGAGTCATCCATGAAAACAGACAGCAGCGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGGGTGCACAAGGAAATTaGAGACCCACTGTGCCCGAC +
Preference number: 5 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRGAQGN*RPTVPD
Trigger: GTCGGGCACAGTGGGTCTCAAATTTCCTTGTGCACC...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTGGACTCCCCAGCTCCTaGACAGCAGGGCCATTCTGT +
Preference number: 5 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGGLPSS*TAGPFC
Trigger: ACAGAATGGCCCTGCTGTCAAGGAGCTGGGGAGTCC...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCAGAACACAAGGGGTTTaGAATGCCAGGCCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: VLRNHQTAAGPPSLPQGPRTQGV*NARPRR
Trigger: CCTTCTTGGCCTGGCATTCAAAACCCCTTGTGTTCT...GGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CAA 90 bp ACGGTTTGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTATGTGTGTCATGCTGTaGGGAGAAAATGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: TVCHQARQEPISACAARSMCVML*GENGSC
Trigger: GCAGGACCCATTTTCTCCCAACAGCATGACACACAT...ACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCAAACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp TCGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTTCACGCACAGGTATTaGCTCACAGTGGGCAATGGG +
Preference number: 5 (lower is better)
Translates to: SCSKESSNGCWASVSSSGFTHRY*LTVGNG
Trigger: CCCATTGCCCACTGTGAGCAAATACCTGTGCGTGAA...CCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CAA 90 bp TCGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGACCTTCCATATGACATaGGCCTGGTCGGGGCAAAGA +
Preference number: 5 (lower is better)
Translates to: SCSKESSNGCWASVSSSGTFHMT*AWSGQR
Trigger: TCTTTGCCCCGACCAGGCCAATGTCATATGGAAGGT...CCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CAA 90 bp ACTCAGGGAACCTGGGGCAGTTTTAGTAACCAGCGAGGCCAGGGCTGTGGCAAGAGCAGGAGAATGGACTaGTTTCCTATTACACAGGCC +
Preference number: 5 (lower is better)
Translates to: TQGTWGSFSNQRGQGCGKSRRMD*FPITQA
Trigger: GGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCT...CTTGCCACAGCCCTGGCCTCGCTGGTTACTAAAACTGCCCCAGGTTCCCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GCTGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCACTGAGAGGGGCCCTGTaGACACTCACATGCCACCCG +
Preference number: 5 (lower is better)
Translates to: AVFQEGLSLVVTNTGPWALRGAL*TLTCHP
Trigger: CGGGTGGCATGTGAGTGTCAACAGGGCCCCTCTCAG...TGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAGCTGTAGCTATAGCATaGCTTGGGGCCATGGAAAAA +
Preference number: 5 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPAAVAIA*LGAMEK
Trigger: TTTTTCCATGGCCCCAAGCAATGCTATAGCTACAGC...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGCCTTCTGTCCTCTGCTaGAAAGGCTGTATTCCAAGA +
Preference number: 5 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRPSVLC*KGCIPR
Trigger: TCTTGGAATACAGCCTTTCAAGCAGAGGACAGAAGG...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCCCTCTCCGAGCCTGCTGTaGTTTCATATCTTGATTGCT +
Preference number: 5 (lower is better)
Translates to: VLRNHQTAAGPPSLPQGPSPSLL*FHILIA
Trigger: AGCAATCAAGATATGAAACAACAGCAGGCTCGGAGA...GGGACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CAA 90 bp AGAGCTAGTTTCTCCCAACCGACATCTTTGAATTCTGCATCTACTAGGCCCATTGACAAATACTGGTCCTaGGGCAGTGTCTGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: RASFSQPTSLNSASTRPIDKYWS*GSVWPA
Trigger: CGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTC...AATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GCTGTATTCCAAGAAGGGCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAAAGGCTGGGCAACCCTaGAATCCAAGCTGGGTACAG +
Preference number: 5 (lower is better)
Translates to: AVFQEGLSLVVTNTGPWAKAGQP*NPSWVQ
Trigger: CTGTACCCAGCTTGGATTCAAGGGTTGCCCAGCCTT...TGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTGGAATACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp ACGGTTTGCCATCAAGCCAGGCAAGAGCCCATTTCTGCCTGTGCAGCTCGCAGTAGAAACTTCACAGATTaGAGAAAACTCTGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: TVCHQARQEPISACAARSRNFTD*RKLCGR
Trigger: CCTCCCACAGAGTTTTCTCAAATCTGTGAAGTTTCT...ACTGCGAGCTGCACAGGCAGAAATGGGCTCTTGCCTGGCTTGATGGCAAACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGGAAGGCACCTCCACCGCCTTTaGAAGAAACTTCACAGATTT +
Preference number: 5 (lower is better)
Translates to: RPWTQSAVRVSDWREEGRHLHRL*KKLHRF
Trigger: AAATCTGTGAAGTTTCTTCAAAAGGCGGTGGAGGTG...CCTTCCCTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AAACAGAGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGGAATGGAGGGTACACTaGCTCTTAGGAAATGTCCCC +
Preference number: 5 (lower is better)
Translates to: KQRPWTQSAVRVSDWREEEWRVH*LLGNVP
Trigger: GGGGACATTTCCTAAGAGCAAGTGTACCCTCCATTC...CTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp CCCCACAGCAGGAGAATGGACTTGTTTCCTATTACACAGGCCATGTGCCCACTGTCCCAACCGACATCTTaGAATTCTGCATCTACTAGG +
Preference number: 5 (lower is better)
Translates to: PHSRRMDLFPITQAMCPLSQPTS*NSASTR
Trigger: CCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGA...CAGTGGGCACATGGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCACTGTTGTTTCATATCTaGATTGCTTATCACTCACCC +
Preference number: 5 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPALLFHI*IAYHSP
Trigger: GGGTGAGTGATAAGCAATCAAGATATGAAACAACAG...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp ATGGAGAGGAGAATGGAGGGCCTTCCACGCACGGGCACTAAAAGAAGGCCAAGCTGTGCACATGGAAATTaGTTCTGCCAAAGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: MERRMEGLPRTGTKRRPSCAHGN*FCQSFS
Trigger: TGAGAAACTTTGGCAGAACAAATTTCCATGTGCACA...GCTTGGCCTTCTTTTAGTGCCCGTGCGTGGAAGGCCCTCCATTCTCCTCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AAACAGAGACCATGGACACAGTCAGCAGTAAGGGTCTCAGACTGGCGTGAAGAGACTGTGCCCGACAGCTaGTGCACATGGAAATTTGTT +
Preference number: 5 (lower is better)
Translates to: KQRPWTQSAVRVSDWREETVPDS*CTWKFV
Trigger: AACAAATTTCCATGTGCACAAGCTGTCGGGCACAGT...CTCTTCACGCCAGTCTGAGACCCTTACTGCTGACTGTGTCCATGGTCTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCGGTGCACAAGGAAATTaGAGACCCACTGTGCCCGAC +
Preference number: 5 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMAGAQGN*RPTVPD
Trigger: GTCGGGCACAGTGGGTCTCAAATTTCCTTGTGCACC...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTAGTGCTCAAGCCTACTaGGGTTCCAATCTGACTCCA +
Preference number: 5 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGSAQAY*GSNLTP
Trigger: TGGAGTCAGATTGGAACCCAAGTAGGCTTGAGCACT...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp CAAGCTGGGTACAGTGCTCAAGCCTACTTGGGTTCCAATCTGACTCCACCACTTCAAGAAGGGCTGAGTTaGGTAGTGACAAATACTGGT +
Preference number: 5 (lower is better)
Translates to: QAGYSAQAYLGSNLTPPLQEGLS*VVTNTG
Trigger: ACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTG...AAGTGGTGGAGTCAGATTGGAACCCAAGTAGGCTTGAGCACTGTACCCAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp ACTAGGCTTGGGTCAGGGCGAGAGGTCCTCATTCAAATGCACATTCTAAGGTCTAGCAGGAGAATGGACTaGTTTCCTATTACACAGGCC +
Preference number: 5 (lower is better)
Translates to: TRLGSGREVLIQMHILRSSRRMD*FPITQA
Trigger: GGCCTGTGTAATAGGAAACAAGTCCATTCTCCTGCT...AGACCTTAGAATGTGCATTTGAATGAGGACCTCTCGCCCTGACCCAAGCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp CGTGTTCTAAGGAATCATCAAACGGCTGCTGGGCCTCCGTCTCTTCCTCAGGGTCAGCAAAGATACTCTTaGTTCCTCAAAAGAGGGAAT +
Preference number: 5 (lower is better)
Translates to: RVLRNHQTAAGPPSLPQGQQRYS*FLKRGN
Trigger: ATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTG...ACCCTGAGGAAGAGACGGAGGCCCAGCAGCCGTTTGATGATTCCTTAGAACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CAA 90 bp AATGGGAAGGGGAGGCCAAACCACACACTAAATGCTGCCCACAGAGGGCCTGCAAAAGAAAATATGATTTaGAGAAGCGATCCATGGCAC +
Preference number: 5 (lower is better)
Translates to: NGKGRPNHTLNAAHRGPAKENMI*RSDPWH
Trigger: GTGCCATGGATCGCTTCTCAAAATCATATTTTCTTT...TGCAGGCCCTCTGTGGGCAGCATTTAGTGTGTGGTTTGGCCTCCCCTTCCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GCTGAGTTTGGTAGTGACAAATACTGGTCCTTGGGCAGTGTCTGGCCGGCGGTGGTCATTTCTATTTCCTaGGTTATGAACAAAGGTAGC +
Preference number: 5 (lower is better)
Translates to: AEFGSDKYWSLGSVWPAVVISIS*VMNKGS
Trigger: GCTACCTTTGTTCATAACCAAGGAAATAGAAATGAC...CACCGCCGGCCAGACACTGCCCAAGGACCAGTATTTGTCACTACCAAACTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCAAGTCCATAGTTTACTaGAGGGTTCACTCTGTGTTA +
Preference number: 5 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFKSIVY*RVHSVL
Trigger: TAACACAGAGTGAACCCTCAAGTAAACTATGGACTT...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AATAGAGATTTTCAGGAGAGCAGCTCAAAGGTACAGCCCAGGGCCGCCCACTTCCTCTCCTCAGTTTTCTaGATGAGTAACATCTTGCAT +
Preference number: 5 (lower is better)
Translates to: NRDFQESSSKVQPRAAHFLSSVF*MSNILH
Trigger: ATGCAAGATGTTACTCATCAAGAAAACTGAGGAGAG...GAAGTGGGCGGCCCTGGGCTGTACCTTTGAGCTGCTCTCCTGAAAATCTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AAGCTAAAAAGAGCCAAGGAAGGATTCTTCCCCAGAGCCTTCAAAGGGACCACACAAGAAGGGCTGAGTTaGGTAGTGACAAATACTGGT +
Preference number: 5 (lower is better)
Translates to: KLKRAKEGFFPRAFKGTTQEGLS*VVTNTG
Trigger: ACCAGTATTTGTCACTACCAAACTCAGCCCTTCTTG...TGTGGTCCCTTTGAAGGCTCTGGGGAAGAATCCTTCCTTGGCTCTTTTTAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp CATTCATCCACTGTGAGTTTCTCGTGTTCTAAGGAATCATCAAACGGCTGCTGGCCTTCTGTCCTCTGCTaGAAAGGCTGTATTCCAAGA +
Preference number: 5 (lower is better)
Translates to: HSSTVSFSCSKESSNGCWPSVLC*KGCIPR
Trigger: TCTTGGAATACAGCCTTTCAAGCAGAGGACAGAAGG...CCAGCAGCCGTTTGATGATTCCTTAGAACACGAGAAACTCACAGTGGATGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373766.9
CDS-3UTR CAA 90 bp GGAAATTTGTTCTGCCAAAGTTTCTCAGATAAAAACAGAGAGGTTCTAGCCACTAGGGAGCAGAACGGTTaGCCATCAAGCCAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: GNLFCQSFSDKNREVLATREQNG*PSSQAR
Trigger: TCTTGCCTGGCTTGATGGCAAACCGTTCTGCTCCCT...AGTGGCTAGAACCTCTCTGTTTTTATCTGAGAAACTTTGGCAGAACAAATTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GACTCAGGCCCCAGCAAAGATACTCTTTGTTCCTCAAAAGAGGGAATGGAGGGTTGTGCACATGGAAATTaGTTCTGCCAAAGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: DSGPSKDTLCSSKEGMEGCAHGN*FCQSFS
Trigger: TGAGAAACTTTGGCAGAACAAATTTCCATGTGCACA...ACCCTCCATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTGGGGCCTGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp ACTAGGCTTGGGTCAGGGCGAGAGGTCCTCATTCAAATGCACATTCTAAGGTCTCTCTCCTCAGTTTTCTaGATGAGTAACATCTTGCAT +
Preference number: 5 (lower is better)
Translates to: TRLGSGREVLIQMHILRSLSSVF*MSNILH
Trigger: ATGCAAGATGTTACTCATCAAGAAAACTGAGGAGAG...AGACCTTAGAATGTGCATTTGAATGAGGACCTCTCGCCCTGACCCAAGCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp CCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAAATAACCTGAATGAAGGCCAAGCCTACTaGGGGAGAGGCAATATCGGG +
Preference number: 5 (lower is better)
Translates to: PAVVSYLDCLSLTQNNLNEGQAY*GRGNIG
Trigger: CCCGATATTGCCTCTCCCCAAGTAGGCTTGGCCTTC...ATTCAGGTTATTTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp CTCAATGAAGAAGTGAGGACAACTTGCTGCCATCTTCAGTTTGATGGAATGGCCCACCTCCACCGCCTTTaGAAGAAACTTCACAGATTT +
Preference number: 5 (lower is better)
Translates to: LNEEVRTTCCHLQFDGMAHLHRL*KKLHRF
Trigger: AAATCTGTGAAGTTTCTTCAAAAGGCGGTGGAGGTG...GGCCATTCCATCAAACTGAAGATGGCAGCAAGTTGTCCTCACTTCTTCATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp ACTAGGCTTGGGTCAGGGCGAGAGGTCCTCATTCAAATGCACATTCTAAGGTCTCAGCAAAGATACTCTTaGTTCCTCAAAAGAGGGAAT +
Preference number: 5 (lower is better)
Translates to: TRLGSGREVLIQMHILRSQQRYS*FLKRGN
Trigger: ATTCCCTCTTTTGAGGAACAAAGAGTATCTTTGCTG...AGACCTTAGAATGTGCATTTGAATGAGGACCTCTCGCCCTGACCCAAGCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AGAGCTAGTTTCTCCCAACCGACATCTTTGAATTCTGCATCTACTAGGCCCATTGCTGTAGCTATAGCATaGCTTGGGGCCATGGAAAAA +
Preference number: 5 (lower is better)
Translates to: RASFSQPTSLNSASTRPIAVAIA*LGAMEK
Trigger: TTTTTCCATGGCCCCAAGCAATGCTATAGCTACAGC...AATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp CAGTCTCCGAGCCTGCTGTTGTTTCATATCTTGATTGCTTATCACTCACCCAAATCTCCGAGCCTGCTGTaGTTTCATATCTTGATTGCT +
Preference number: 5 (lower is better)
Translates to: QSPSLLLFHILIAYHSPKSPSLL*FHILIA
Trigger: AGCAATCAAGATATGAAACAACAGCAGGCTCGGAGA...TTTGGGTGAGTGATAAGCAATCAAGATATGAAACAACAGCAGGCTCGGAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AGAGCTAGTTTCTCCCAACCGACATCTTTGAATTCTGCATCTACTAGGCCCATTAGAAACTTCACAGATTaGAGAAAACTCTGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: RASFSQPTSLNSASTRPIRNFTD*RKLCGR
Trigger: CCTCCCACAGAGTTTTCTCAAATCTGTGAAGTTTCT...AATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp GCCTCTTACCTAAAAGCTCAGGAGGATTTAGGGGGAATGCAGATAGAGCACATGAAAGAAAATATGATTTaGAGAAGCGATCCATGGCAC +
Preference number: 5 (lower is better)
Translates to: ASYLKAQEDLGGMQIEHMKENMI*RSDPWH
Trigger: GTGCCATGGATCGCTTCTCAAAATCATATTTTCTTT...CATGTGCTCTATCTGCATTCCCCCTAAATCCTCCTGAGCTTTTAGGTAAGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AAGCTAAAAAGAGCCAAGGAAGGATTCTTCCCCAGAGCCTTCAAAGGGACCACAGTCATTTCTATTTCCTaGGTTATGAACAAAGGTAGC +
Preference number: 5 (lower is better)
Translates to: KLKRAKEGFFPRAFKGTTVISIS*VMNKGS
Trigger: GCTACCTTTGTTCATAACCAAGGAAATAGAAATGAC...TGTGGTCCCTTTGAAGGCTCTGGGGAAGAATCCTTCCTTGGCTCTTTTTAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS-3UTR CAA 90 bp AGAGCTAGTTTCTCCCAACCGACATCTTTGAATTCTGCATCTACTAGGCCCATTCTGTTGTTTCATATCTaGATTGCTTATCACTCACCC +
Preference number: 5 (lower is better)
Translates to: RASFSQPTSLNSASTRPILLFHI*IAYHSP
Trigger: GGGTGAGTGATAAGCAATCAAGATATGAAACAACAG...AATGGGCCTAGTAGATGCAGAATTCAAAGATGTCGGTTGGGAGAAACTAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS CCA 72 bp GCTCATCCCGGGCACCCGATCTCGGCGGCCCCAGCGTaGCGGCTGCGTTCGCGGCCCAACGGGCTCCCAGCG +
Preference number: 6 (lower is better)
Translates to: AHPGHPISAAPA*RLRSRPNGLPA
Trigger: CGCTGGGAGCCCGTTGGGCCGCGAACGCAGCCGCCACGCTGGGGCCGCCGAGATCGGGTGCCCGGGATGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS GCA 72 bp TGTCGATGGCCGAGCACACGGAGCCATAGGCCCCGCTaGCGACGTGCGTCGGGGACACGTAGGTCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: CRWPSTRSHRPR*RRASGTRRSWA
Trigger: TGCCCAAGACCTACGTGTCCCCGACGCACGTCGGCAGCGGGGCCTATGGCTCCGTGTGCTCGGCCATCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000211287.9
ENST00000373766.9
ENST00000476951.5
CDS GCA 72 bp GAGAGGGGCACAGCGCCAGGGGCAGCAACGTCTCATTaGGACGGGATCCACGGCAGGGCGGGAGTCTCACTC +
Preference number: 6 (lower is better)
Translates to: ERGTAPGAATSH*DGIHGRAGVSL
Trigger: GAGTGAGACTCCCGCCCTGCCGTGGATCCCGTCGCAATGAGACGTTGCTGCCCCTGGCGCTGTGCCCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS CAA 90 bp GCGACGGGATCCACGGCAGGGCGGGAGTCTCACTCTGTCTGCAACTaGGCGAGCCACCTCCCCCTCTTGGGGCCTCGGTGTACTCGTCTG +
Preference number: 6 (lower is better)
Translates to: ATGSTAGRESHSVCN*ASHLPLLGPRCTRL
Trigger: CAGACGAGTACACCGAGGCCCCAAGAGGGGGAGGTGGCTCGCCAAGTTGCAGACAGAGTGAGACTCCCGCCCTGCCGTGGATCCCGTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS GCA 72 bp ACGGGATCCACGGCAGGGCGGGAGTCTCACTCTGTCTaGAACTTGGCGAGCCACCTCCCCCTCTTGGGGCCT +
Preference number: 6 (lower is better)
Translates to: TGSTAGRESHSV*NLASHLPLLGP
Trigger: AGGCCCCAAGAGGGGGAGGTGGCTCGCCAAGTTGCAGACAGAGTGAGACTCCCGCCCTGCCGTGGATCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS CCA 72 bp CCACGGCAGGGCGGGAGTCTCACTCTGTCTGCAACTTaGCGAGCCACCTCCCCCTCTTGGGGCCTCGGTGTA +
Preference number: 6 (lower is better)
Translates to: PRQGGSLTLSAT*RATSPSWGLGV
Trigger: TACACCGAGGCCCCAAGAGGGGGAGGTGGCTCGCCAAGTTGCAGACAGAGTGAGACTCCCGCCCTGCCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS CAA 72 bp AGAGAGGGGCACAGCGCCAGGGGCAGCAACGTCTCATaGCGACGGGATCCACGGCAGGGCGGGAGTCTCACT +
Preference number: 6 (lower is better)
Translates to: REGHSARGSNVS*RRDPRQGGSLT
Trigger: AGTGAGACTCCCGCCCTGCCGTGGATCCCGTCGCAATGAGACGTTGCTGCCCCTGGCGCTGTGCCCCTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS CAA 90 bp CAGGAGCTGAGAGAGGGGCACAGCGCCAGGGGCAGCAACGTCTCATaGCGACGGGATCCACGGCAGGGCGGGAGTCTCACTCTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: QELREGHSARGSNVS*RRDPRQGGSLTLSA
Trigger: TGCAGACAGAGTGAGACTCCCGCCCTGCCGTGGATCCCGTCGCAATGAGACGTTGCTGCCCCTGGCGCTGTGCCCCTCTCTCAGCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS CCA 72 bp CTTCTCCAGCAGGTCCGCAGCCTGGGGGCTGGCCCGTaGGAACAGCTGAGTGAAATCCTTCCTGGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: LLQQVRSLGAGP*EQLSEILPGGL
Trigger: CAGACCCCCAGGAAGGATTTCACTCAGCTGTTCCCACGGGCCAGCCCCCAGGCTGCGGACCTGCTGGAGAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211287.9
ENST00000373766.9
CDS CCA 72 bp GAGCGGGCTCTGAGACTCACCCTGGGGGCTGGCCCGTaGGAACAGCTGAGTGAAATCCTTCCTGGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: ERALRLTLGAGP*EQLSEILPGGL
Trigger: CAGACCCCCAGGAAGGATTTCACTCAGCTGTTCCCACGGGCCAGCCCCCAGGGTGAGTCTCAGAGCCCGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373759.1
CDS TCA 72 bp GGGTCGGCTCAGCTTCTTGATGGCCACCTTCTCCCCTaGCCGCTTGTCGATGGCCGAGCACACGGAGCCATA +
Preference number: 6 (lower is better)
Translates to: GSAQLLDGHLLP*PLVDGRAHGAI
Trigger: TATGGCTCCGTGTGCTCGGCCATCGACAAGCGGTCAGGGGAGAAGGTGGCCATCAAGAAGCTGAGCCGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000211287.9
ENST00000373759.1
ENST00000373766.9
ENST00000476951.5
CDS TCA 72 bp GGGTCGGCTCAGCTTCTTGATGGCCACCTTCTCCCCTaGCCGCTTGTCGATGGCCGAGCTAGAATATGGGGG +
Preference number: 6 (lower is better)
Translates to: GSAQLLDGHLLP*PLVDGRARIWG
Trigger: CCCCCATATTCTAGCTCGGCCATCGACAAGCGGTCAGGGGAGAAGGTGGCCATCAAGAAGCTGAGCCGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS CCA 72 bp CCCGATGAACTCTGGGGTCTTGCAAGTGTACAGTCCTaGAGAACCAGGCCCAGTCCCAACTCAACCCCCAGA +
Preference number: 6 (lower is better)
Translates to: PDELWGLASVQS*RTRPSPNSTPR
Trigger: TCTGGGGGTTGAGTTGGGACTGGGCCTGGTTCTCCAGGACTGTACACTTGCAAGACCCCAGAGTTCATCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS CAA 72 bp GTAACAGTGAGGATCTGCCCGATGAACTCTGGGGTCTaGCAAGTGTACAGTCCTGGAGAACCAGGCCCAGTC +
Preference number: 6 (lower is better)
Translates to: VTVRICPMNSGV*QVYSPGEPGPV
Trigger: GACTGGGCCTGGTTCTCCAGGACTGTACACTTGCAAGACCCCAGAGTTCATCGGGCAGATCCTCACTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS CCA 72 bp CTCGTCTGTAACAGTGAGGATCTGCCCGATGAACTCTaGGGTCTTGCAAGTGTACAGTCCTGGAGAACCAGG +
Preference number: 6 (lower is better)
Translates to: LVCNSEDLPDEL*GLASVQSWRTR
Trigger: CCTGGTTCTCCAGGACTGTACACTTGCAAGACCCCAGAGTTCATCGGGCAGATCCTCACTGTTACAGACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490334.1
CDS CAA 90 bp TACTCGTCTGTAACAGTGAGGATCTGCCCGATGAACTCTGGGGTCTaGCAAGTGTACAGTCCTGGAGAACCAGGCCCAGTCCCAACTCAA +
Preference number: 6 (lower is better)
Translates to: YSSVTVRICPMNSGV*QVYSPGEPGPVPTQ
Trigger: TTGAGTTGGGACTGGGCCTGGTTCTCCAGGACTGTACACTTGCAAGACCCCAGAGTTCATCGGGCAGATCCTCACTGTTACAGACGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490334.1