RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAPK11 (Homo sapiens)

Ensembl gene IDs: ENSG00000185386

Ensembl transcript IDs: ENST00000330651.11, ENST00000395764.5, ENST00000417877.1, ENST00000495277.1

Found 348 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACAGACCAGAGCACCTCAGATCTCCGGCTGCAGGGCCACAACGGTaGGCAGAGGTAGAGAGCGGGCCAGGGTGCAGGGCAGAAGTGTCC +
Preference number: 1 (lower is better)
Translates to: HRPEHLRSPAAGPQR*AEVESGPGCRAEVS
Trigger: GGACACTTCTGCCCTGCACCCTGGCCCGCTCTCTACCTCTGCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGGTGCTCTGGTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR TCA 90 bp CAGCGCGTCCTCCAGAAAGCCCTGGGACAGAAGAGAGCCCAAGGCTaGCACTCCCTTGGGTCGGCCTGGGACAGACAGGGGAACTCCGCA +
Preference number: 1 (lower is better)
Translates to: QRVLQKALGQKRAQG*HSLGSAWDRQGNSA
Trigger: TGCGGAGTTCCCCTGTCTGTCCCAGGCCGACCCAAGGGAGTGTCAGCCTTGGGCTCTCTTCTGTCCCAGGGCTTTCTGGAGGACGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR GCA 90 bp GCCTCAGGAAGCTGCTGTGGGTCCCACATCCAAGGAGAAAGCCCCTaGCCATGCTCATGTGGTTGCCCTTTGGCCCACTGGAGCCGCCAG +
Preference number: 1 (lower is better)
Translates to: ASGSCCGSHIQGESP*PCSCGCPLAHWSRQ
Trigger: CTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGACCCACAGCAGCTTCCTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR GCA 90 bp AGGGCAGAAGTGTCCGAGTCCAAGTCCACATCCAGGTGTGCTGCCTaGCCTAGCGTCCTCAAGGCCAAACCACCCACCCACCCACCCCCA +
Preference number: 1 (lower is better)
Translates to: RAEVSESKSTSRCAA*PSVLKAKPPTHPPP
Trigger: TGGGGGTGGGTGGGTGGGTGGTTTGGCCTTGAGGACGCTAGGGCAGGCAGCACACCTGGATGTGGACTTGGACTCGGACACTTCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 90 bp GCCCAGCCTGGTGGCACACTGGCTCTGCCTCTCCTCTTAGACCTGTaGGTCTCAGCAGTGACCAAGACAGCCCCCTACCTCCAGGCTGAG +
Preference number: 1 (lower is better)
Translates to: AQPGGTLALPLLLDL*VSAVTKTAPYLQAE
Trigger: CTCAGCCTGGAGGTAGGGGGCTGTCTTGGTCACTGCTGAGACCCACAGGTCTAAGAGGAGAGGCAGAGCCAGTGTGCCACCAGGCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 90 bp AGGTCACCCCCTTTCCAGGGCAGAGCCACACCCCCAACTCAGCTCTaGGCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCCTG +
Preference number: 1 (lower is better)
Translates to: RSPPFQGRATPPTQL*AGSRLRGYWISSIL
Trigger: CAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTGAGTTGGGGGTGTGGCTCTGCCCTGGAAAGGGGGTGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 90 bp GGGCTGCTGGGCAGCACCTCACTGCTCAATCTCCAGGCTGCCAGGTaGCTTCGGTGGCTCTGGGGGCTTGAAGCTGAGGACTTCCTGGTA +
Preference number: 1 (lower is better)
Translates to: GLLGSTSLLNLQAAR*LRWLWGLEAEDFLV
Trigger: TACCAGGAAGTCCTCAGCTTCAAGCCCCCAGAGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAGCAGTGAGGTGCTGCCCAGCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR CCA 90 bp CACCCACCCCGGCTCCAGCTTCTTGCCAGATATGGCTGCTGGCCTTaGGCGCCCACAGATTCACACGCACCACATCACATGTGCCCTGAC +
Preference number: 1 (lower is better)
Translates to: HPPRLQLLARYGCWP*APTDSHAPHHMCPD
Trigger: GTCAGGGCACATGTGATGTGGTGCGTGTGAATCTGTGGGCGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 90 bp AGGTCACCCCCTTTCCAGGGCAGAGCCACACCCCCAACTCAGCTCTaGGCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCATG +
Preference number: 1 (lower is better)
Translates to: RSPPFQGRATPPTQL*AGSRLRGYWISSIM
Trigger: CATGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTGAGTTGGGGGTGTGGCTCTGCCCTGGAAAGGGGGTGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395764.5
3UTR TCA 90 bp CCTGTGGGTCTCAGCAGTGACCAAGACAGCCCCCTACCTCCAGGCTaGGCAGCTCTAACCACTGAGACCTCTCCCTTTGAGTCTCCCGGG +
Preference number: 1 (lower is better)
Translates to: PVGLSSDQDSPLPPG*AALTTETSPFESPG
Trigger: CCCGGGAGACTCAAAGGGAGAGGTCTCAGTGGTTAGAGCTGCTCAGCCTGGAGGTAGGGGGCTGTCTTGGTCACTGCTGAGACCCACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR GCA 90 bp GGGTCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTaGCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAG +
Preference number: 1 (lower is better)
Translates to: GSHIQGESPCPCSCG*PLAHWSRQSETPLK
Trigger: CTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR GCA 90 bp GGAAGCTGCTGTGGGTCCCACATCCAAGGAGAAAGCCCCTGCCCATaGTCATGTGGTTGCCCTTTGGCCCACTGGAGCCGCCAGTCTGAA +
Preference number: 1 (lower is better)
Translates to: GSCCGSHIQGESPCP*SCGCPLAHWSRQSE
Trigger: TTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGACCCACAGCAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 90 bp GGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCCCACTaGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAG +
Preference number: 1 (lower is better)
Translates to: GESPCPCSCGCPLAH*SRQSETPLKASGTE
Trigger: CTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR TCA 90 bp CCCATGCTCATGTGGTTGCCCTTTGGCCCACTGGAGCCGCCAGTCTaGAACACCCCTCAAGGCATCAGGAACCGAGGAGAGGGAAGGCAA +
Preference number: 1 (lower is better)
Translates to: PMLMWLPFGPLEPPV*NTPQGIRNRGEGRQ
Trigger: TTGCCTTCCCTCTCCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR TCA 90 bp CCGAGGTTACTGGATCAGCTCCATCCTGGGACAAGGAAAGAGGACTaGCCCACAGACCAGAGCACCTCAGATCTCCGGCTGCAGGGCCAC +
Preference number: 1 (lower is better)
Translates to: PRLLDQLHPGTRKED*PTDQSTSDLRLQGH
Trigger: GTGGCCCTGCAGCCGGAGATCTGAGGTGCTCTGGTCTGTGGGTCAGTCCTCTTTCCTTGTCCCAGGATGGAGCTGATCCAGTAACCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 90 bp ACACCCCCAACTCAGCTCTGGGCAGGGTCCCGTCTCCGAGGTTACTaGATCAGCTCCATCCTGGGACAAGGAAAGAGGACTGACCCACAG +
Preference number: 1 (lower is better)
Translates to: TPPTQLWAGSRLRGY*ISSILGQGKRTDPQ
Trigger: CTGTGGGTCAGTCCTCTTTCCTTGTCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTGAGTTGGGGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 90 bp ACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTaGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAG +
Preference number: 1 (lower is better)
Translates to: TSKEKAPAHAHVVAL*PTGAASLKHPSRHQ
Trigger: CTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 90 bp ACCTCACTGCTCAATCTCCAGGCTGCCAGGTGGCTTCGGTGGCTCTaGGGGCTTGAAGCTGAGGACTTCCTGGTAAGTGAGCTCCTTCCA +
Preference number: 1 (lower is better)
Translates to: TSLLNLQAARWLRWL*GLEAEDFLVSELLP
Trigger: TGGAAGGAGCTCACTTACCAGGAAGTCCTCAGCTTCAAGCCCCCAGAGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAGCAGTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR GCA 90 bp TGTGCCCTGACATATGAACACGGGGAGTGCACGCTCATCCACACGTaGCCACACACACCCACGGGTGAACACAAGACTCCAGGCAGCTTT +
Preference number: 1 (lower is better)
Translates to: CALTYEHGECTLIHT*PHTPTGEHKTPGSF
Trigger: AAAGCTGCCTGGAGTCTTGTGTTCACCCGTGGGTGTGTGTGGGCACGTGTGGATGAGCGTGCACTCCCCGTGTTCATATGTCAGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 90 bp AGCTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTaGCACACTGGCTCTGCCTCTCCTCTTAGACCTGTGGGTCTCAGC +
Preference number: 1 (lower is better)
Translates to: SFSHLTPGGCPCPAW*HTGSASPLRPVGLS
Trigger: GCTGAGACCCACAGGTCTAAGAGGAGAGGCAGAGCCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR TCA 90 bp AGATTTTTGCCAGAACCTCAGGGCTGGGTGTGCCCACCACTTCCATaGTGCGCTTCAGCTGGTCAATGTAGTCGCTTCCCGGGAAGAGGG +
Preference number: 1 (lower is better)
Translates to: RFLPEPQGWVCPPLP*CASAGQCSRFPGRG
Trigger: CCCTCTTCCCGGGAAGCGACTACATTGACCAGCTGAAGCGCATCATGGAAGTGGTGGGCACACCCAGCCCTGAGGTTCTGGCAAAAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR GCA 90 bp AAGACTCCAGGCAGCTTTTCTCATTTGACACCTGGTGGTTGTCCCTaGCCAGCCTGGTGGCACACTGGCTCTGCCTCTCCTCTTAGACCT +
Preference number: 1 (lower is better)
Translates to: KTPGSFSHLTPGGCP*PAWWHTGSASPLRP
Trigger: AGGTCTAAGAGGAGAGGCAGAGCCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAGCTGCCTGGAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CAA 90 bp TCCAGAAAGCCCTGGGACAGAAGAGAGCCCAAGGCTGACACTCCCTaGGGTCGGCCTGGGACAGACAGGGGAACTCCGCAGGGGAACCCC +
Preference number: 2 (lower is better)
Translates to: SRKPWDRREPKADTP*GRPGTDRGTPQGNP
Trigger: GGGGTTCCCCTGCGGAGTTCCCCTGTCTGTCCCAGGCCGACCCAAGGGAGTGTCAGCCTTGGGCTCTCTTCTGTCCCAGGGCTTTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR GCA 90 bp CCTCAGATCTCCGGCTGCAGGGCCACAACGGTGGGCAGAGGTAGAGAGCGGGCCGCCCAGGGACACTTGTaGCCAGACTCCTACACATGG +
Preference number: 2 (lower is better)
Translates to: PQISGCRATTVGRGRERAAQGHL*PDSYTW
Trigger: CCATGTGTAGGAGTCTGGGCACAAGTGTCCCTGGGC...GGCCCGCTCTCTACCTCTGCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR GCA 90 bp CAGCTCTGGGCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCCTGGGACCGGGAAGAGGGCCTTaGCCTGGAGCAGCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: QLWAGSRLRGYWISSILGPGRGP*PGAAQP
Trigger: TGGCTGAGCTGCTCCAGGGCAAGGCCCTCTTCCCGG...TCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR CCA 90 bp GACCCACAGACCAGAGCACCTCAGATCTCCGGCTGCAGGGCCACAACGGTGGGCAGGCTGACACTCCCTTaGGTCGGCCTGGGACAGACA +
Preference number: 2 (lower is better)
Translates to: DPQTRAPQISGCRATTVGRLTLP*VGLGQT
Trigger: TGTCTGTCCCAGGCCGACCCAAGGGAGTGTCAGCCT...GCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGGTGCTCTGGTCTGTGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR TCA 90 bp TGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAGCGTGTAGATTCTCCTaGAGGCGAGGGGTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: CGRCLSRKPGQLWKGAGPACRFS*RRGVLG
Trigger: GCCTAGGACCCCTCGCCTTCAGGAGAATCTACACGC...TGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
3UTR-3UTR GCA 90 bp CCTCAGATCTCCGGCTGCAGGGCCACAACGGTGGGCAGAGGTAGAGAGCGGGCCGGTCCCAGTGGAGAGTaGAGTAGCCAGAAGAGGACA +
Preference number: 2 (lower is better)
Translates to: PQISGCRATTVGRGRERAGPSGE*SSQKRT
Trigger: TGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACC...GGCCCGCTCTCTACCTCTGCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR GCA 90 bp CCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCCCCCTCAGATCTCCGGCTaGAGGGCCACAACGGTGGGC +
Preference number: 2 (lower is better)
Translates to: PTSKEKAPAHAHVVALWPPQISG*RATTVG
Trigger: GCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGG...GGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp CCAGAAGAGGACAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCCCCTGCCCAGCCTGGTaGCACACTGGCTCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: PEEDRRTKVGPGTLVPRLPCPAW*HTGSAS
Trigger: AGAGGCAGAGCCAGTGTGCCACCAGGCTGGGCAGGG...GAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTGTCCTCTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp GGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAGGAGAGGGAAGTGTCCCTGCCCAGCCTaGTGGCACACTGGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: GAASLKHPSRHQEPRRGKCPCPA*WHTGSA
Trigger: GGCAGAGCCAGTGTGCCACCAGGCTGGGCAGGGACA...CTTCCCTCTCCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR TCA 90 bp CAGCTCTGGGCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCCTGGGAGCGTGTAGATTCTCCTaGAGGCGAGGGGTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: QLWAGSRLRGYWISSILGACRFS*RRGVLG
Trigger: GCCTAGGACCCCTCGCCTTCAGGAGAATCTACACGC...TCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR TCA 90 bp CCAGAAGAGGACAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCAAGAGAGCCCAAGGCTaGCACTCCCTTGGGTCGGCC +
Preference number: 2 (lower is better)
Translates to: PEEDRRTKVGPGTLVPRLKRAQG*HSLGSA
Trigger: GGCCGACCCAAGGGAGTGTCAGCCTTGGGCTCTCTT...GAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTGTCCTCTTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR TCA 90 bp CCTCTTAGACCTGTGGGTCTCAGCAGTGACCAAGACAGCCCCCTACCTCCAGGCAAGAGAGCCCAAGGCTaGCACTCCCTTGGGTCGGCC +
Preference number: 2 (lower is better)
Translates to: PLRPVGLSSDQDSPLPPGKRAQG*HSLGSA
Trigger: GGCCGACCCAAGGGAGTGTCAGCCTTGGGCTCTCTT...GCCTGGAGGTAGGGGGCTGTCTTGGTCACTGCTGAGACCCACAGGTCTAAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR TCA 90 bp GCACACCCACCCCGGCTCCAGCTTCTTGCCAGATATGGCTGCTGGCCTTGGGCGATGTGCCCTGACATATaGACACGGGGAGTGCACGCT +
Preference number: 2 (lower is better)
Translates to: AHPPRLQLLARYGCWPWAMCPDI*TRGVHA
Trigger: AGCGTGCACTCCCCGTGTTCATATGTCAGGGCACAT...CGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR GCA 90 bp GACCCACAGACCAGAGCACCTCAGATCTCCGGCTGCAGGGCCACAACGGTGGGCGGTCCCAGTGGAGAGTaGAGTAGCCAGAAGAGGACA +
Preference number: 2 (lower is better)
Translates to: DPQTRAPQISGCRATTVGGPSGE*SSQKRT
Trigger: TGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACC...GCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGGTGCTCTGGTCTGTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR GCA 90 bp TGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCATGGGCAGCACCTCACTaGTCAATCTCCAGGCTGCCA +
Preference number: 2 (lower is better)
Translates to: CGRCLSRKPGQLWKGAGPWAAPH*SISRLP
Trigger: TGGCAGCCTGGAGATTGAGCAGTGAGGTGCTGCCCA...TGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR GCA 90 bp TCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCCCAGGCTCTCAGGGGCTaGTGGGCAGCACCTCACTGC +
Preference number: 2 (lower is better)
Translates to: SHIQGESPCPCSCGCPLAQALRG*WAAPHC
Trigger: GCAGTGAGGTGCTGCCCAGCAGCCCCTGAGAGCCTG...GGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR CCA 90 bp CTGGGACAAGGAAAGAGGACTGACCCACAGACCAGAGCACCTCAGATCTCCGGCGCAGGGCCACAACGGTaGGCAGAGGTAGAGAGCGGG +
Preference number: 2 (lower is better)
Translates to: LGQGKRTDPQTRAPQISGAGPQR*AEVESG
Trigger: CCCGCTCTCTACCTCTGCCCACCGTTGTGGCCCTGC...GCCGGAGATCTGAGGTGCTCTGGTCTGTGGGTCAGTCCTCTTTCCTTGTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp AGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTGCTCTCAGGGGCTGCTaGGCAGCACCTCACTGCTCA +
Preference number: 2 (lower is better)
Translates to: RRGVLGQKSVTIGVWEVPALRGC*AAPHCS
Trigger: TGAGCAGTGAGGTGCTGCCCAGCAGCCCCTGAGAGC...AGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR TCA 90 bp CCTCTTAGACCTGTGGGTCTCAGCAGTGACCAAGACAGCCCCCTACCTCCAGGCGCGTGTAGATTCTCCTaGAGGCGAGGGGTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: PLRPVGLSSDQDSPLPPGACRFS*RRGVLG
Trigger: GCCTAGGACCCCTCGCCTTCAGGAGAATCTACACGC...GCCTGGAGGTAGGGGGCTGTCTTGGTCACTGCTGAGACCCACAGGTCTAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR TCA 90 bp CCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCCCTGTGGGTCTCAGCAGTaGCCAAGACAGCCCCCTACC +
Preference number: 2 (lower is better)
Translates to: PTSKEKAPAHAHVVALWPCGSQQ*PRQPPT
Trigger: GGTAGGGGGCTGTCTTGGTCACTGCTGAGACCCACA...GGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR TCA 90 bp GGTGCAGGGCAGAAGTGTCCGAGTCCAAGTCCACATCCAGGTGTGCTGCCTGCCACACACACCCACGGGTaGACACAAGACTCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: GAGQKCPSPSPHPGVLPATHTHG*TQDSRQ
Trigger: CTGCCTGGAGTCTTGTGTTCACCCGTGGGTGTGTGT...GGCAGGCAGCACACCTGGATGTGGACTTGGACTCGGACACTTCTGCCCTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR GCA 90 bp CCAGAAGAGGACAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCACGCTCATCCACACGTaGCCACACACACCCACGGGT +
Preference number: 2 (lower is better)
Translates to: PEEDRRTKVGPGTLVPRLTLIHT*PHTPTG
Trigger: ACCCGTGGGTGTGTGTGGGCACGTGTGGATGAGCGT...GAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTGTCCTCTTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp ACATGTGCCCTGACATATGAACACGGGGAGTGCACGCTCATCCACACGTGCCCAGCAGGGCCACAACGGTaGGCAGAGGTAGAGAGCGGG +
Preference number: 2 (lower is better)
Translates to: TCALTYEHGECTLIHTCPAGPQR*AEVESG
Trigger: CCCGCTCTCTACCTCTGCCCACCGTTGTGGCCCTGC...TGGGCACGTGTGGATGAGCGTGCACTCCCCGTGTTCATATGTCAGGGCACATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp TGCCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAGGTCCTTCTGGGGCATaGGGGGCAGGGACTGGATAT +
Preference number: 2 (lower is better)
Translates to: CPLAHWSRQSETPLKASGGPSGA*GAGTGY
Trigger: ATATCCAGTCCCTGCCCCCCATGCCCCAGAAGGACC...TCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR TCA 90 bp GCACACCCACCCCGGCTCCAGCTTCTTGCCAGATATGGCTGCTGGCCTTGGGCGACATCACATGTGCCCTaGCATATGAACACGGGGAGT +
Preference number: 2 (lower is better)
Translates to: AHPPRLQLLARYGCWPWATSHVP*HMNTGS
Trigger: ACTCCCCGTGTTCATATGTCAGGGCACATGTGATGT...CGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR TCA 90 bp CTGCTGTGGGTCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGGTGCCTCAGCTGCACTaGCCCTCTGGTCACTGTCCA +
Preference number: 2 (lower is better)
Translates to: LLWVPHPRRKPLPMLMWLVPQLH*PSGHCP
Trigger: TGGACAGTGACCAGAGGGTCAGTGCAGCTGAGGCAC...CAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGACCCACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR GCA 90 bp ACATGTGCCCTGACATATGAACACGGGGAGTGCACGCTCATCCACACGTGCCCACCTGGTGGTTGTCCCTaGCCAGCCTGGTGGCACACT +
Preference number: 2 (lower is better)
Translates to: TCALTYEHGECTLIHTCPPGGCP*PAWWHT
Trigger: AGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGG...TGGGCACGTGTGGATGAGCGTGCACTCCCCGTGTTCATATGTCAGGGCACATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp CCAGAAGAGGACAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCTATGGCTGCTGGCCTTaGGCGCCCACAGATTCACAC +
Preference number: 2 (lower is better)
Translates to: PEEDRRTKVGPGTLVPRLYGCWP*APTDSH
Trigger: GTGTGAATCTGTGGGCGCCCAAGGCCAGCAGCCATA...GAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTGTCCTCTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp CCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCCCTATGGCTGCTGGCCTTaGGCGCCCACAGATTCACAC +
Preference number: 2 (lower is better)
Translates to: PTSKEKAPAHAHVVALWPYGCWP*APTDSH
Trigger: GTGTGAATCTGTGGGCGCCCAAGGCCAGCAGCCATA...GGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp ACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGACAGGAGGACATGTGGTTGCCCTTTaGCCCACTGGAGCCGCCAGT +
Preference number: 2 (lower is better)
Translates to: TPQSGPSGECSSQKRTGGHVVAL*PTGAAS
Trigger: ACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATG...TCCTCCTGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp AGCGTGCGCTCCTTGGCCTCAACGCTCTCATCATATGGCTCGGCCTCTGGCTCAAAGAGGGCCTTGCCCTaGAGCAGCTCAGCCATGATG +
Preference number: 2 (lower is better)
Translates to: SVRSLASTLSSYGSASGSKRALP*SSSAMM
Trigger: CATCATGGCTGAGCTGCTCCAGGGCAAGGCCCTCTT...TGAGCCAGAGGCCGAGCCATATGATGAGAGCGTTGAGGCCAAGGAGCGCACGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR CCA 90 bp GTCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCTGGCTTCGGTGGCTCTaGGGGCTTGAAGCTGAGGAC +
Preference number: 2 (lower is better)
Translates to: VPHPRRKPLPMLMWLPFGWLRWL*GLEAED
Trigger: GTCCTCAGCTTCAAGCCCCCAGAGCCACCGAAGCCA...GCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR CAA 90 bp CACACACCCACGGGTGAACACAAGACTCCAGGCAGCTTTTCTCATTaGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACTGGC +
Preference number: 2 (lower is better)
Translates to: HTPTGEHKTPGSFSH*TPGGCPCPAWWHTG
Trigger: GCCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAGCTGCCTGGAGTCTTGTGTTCACCCGTGGGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CAA 90 bp CACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTaGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCA +
Preference number: 2 (lower is better)
Translates to: HIQGESPCPCSCGCP*AHWSRQSETPLKAS
Trigger: TGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR GCA 90 bp GTCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCCTCCACGGAAGATGCTaGTCAGGTCCTTCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: VPHPRRKPLPMLMWLPFGLHGRC*SGPSGA
Trigger: TGCCCCAGAAGGACCTGAGCAGCATCTTCCGTGGAG...GCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR CCA 90 bp TGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAGGTTCTCATTTGACACCTaGTGGTTGTCCCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: WPTGAASLKHPSRHQEPRFSFDT*WLSLPS
Trigger: GCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAA...CCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp GAACCCCTTTGGCATCTAGGACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGATATGGCTGCTaGCCTTGGGCGCCCACAGAT +
Preference number: 2 (lower is better)
Translates to: EPLWHLGPHSQVPVESAVARYGC*PWAPTD
Trigger: ATCTGTGGGCGCCCAAGGCCAGCAGCCATATCTGGC...TACTGCACTCTCCACTGGGACCTGACTGTGGGGTCCTAGATGCCAAAGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp CTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACTGGCTATGGCCAGGGGGTTaGCTCCACGGAAGATGCTGC +
Preference number: 2 (lower is better)
Translates to: LFSFDTWWLSLPSLVAHWLWPGG*LHGRCC
Trigger: GCAGCATCTTCCGTGGAGCCAACCCCCTGGCCATAG...CCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR TCA 90 bp ACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGACAGGAGGAATGTGCCCTGACATATaGACACGGGGAGTGCACGCT +
Preference number: 2 (lower is better)
Translates to: TPQSGPSGECSSQKRTGGMCPDI*TRGVHA
Trigger: AGCGTGCACTCCCCGTGTTCATATGTCAGGGCACAT...TCCTCCTGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR GCA 90 bp TCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCCTATGAACACGGGGAGTaGACGCTCATCCACACGTGC +
Preference number: 2 (lower is better)
Translates to: SHIQGESPCPCSCGCPLAYEHGE*TLIHTC
Trigger: GCACGTGTGGATGAGCGTGCACTCCCCGTGTTCATA...GGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR GCA 90 bp CTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACTGGCCAGCCTCAGGAAGCTaGTGTGGGTCCCACATCCAA +
Preference number: 2 (lower is better)
Translates to: LFSFDTWWLSLPSLVAHWPASGS*CGSHIQ
Trigger: TTGGATGTGGGACCCACAGCAGCTTCCTGAGGCTGG...CCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp CCAGAAGAGGACAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCCTCCTCTTAGACCTGTaGGTCTCAGCAGTGACCAAG +
Preference number: 2 (lower is better)
Translates to: PEEDRRTKVGPGTLVPRLLLLDL*VSAVTK
Trigger: CTTGGTCACTGCTGAGACCCACAGGTCTAAGAGGAG...GAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTGTCCTCTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp TGGGCAGCACCTCACTGCTCAATCTCCAGGCTGCCAGGTGGCTTCGGTGGCTCTCCAGACTCCTACACATaGCAAGCACATGTACACACA +
Preference number: 2 (lower is better)
Translates to: WAAPHCSISRLPGGFGGSPDSYT*QAHVHT
Trigger: TGTGTGTACATGTGCTTGCCATGTGTAGGAGTCTGG...AGAGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAGCAGTGAGGTGCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR CCA 90 bp ACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGACAGGAGGATTCTCATTTGACACCTaGTGGTTGTCCCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: TPQSGPSGECSSQKRTGGFSFDT*WLSLPS
Trigger: GCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAA...TCCTCCTGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CCA 90 bp GGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAGGAGAGGGAAGCCAGACTCCTACACATaGCAAGCACATGTACACACA +
Preference number: 2 (lower is better)
Translates to: GAASLKHPSRHQEPRRGKPDSYT*QAHVHT
Trigger: TGTGTGTACATGTGCTTGCCATGTGTAGGAGTCTGG...CTTCCCTCTCCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR GCA 90 bp TGCCCAGCCTGGTGGCACACTGGCTCTGCCTCTCCTCTTAGACCTGTGGGTCTCACACATGTTTGTGCATaGATACATGCGTGTAGATTC +
Preference number: 2 (lower is better)
Translates to: CPAWWHTGSASPLRPVGLTHVCA*IHACRF
Trigger: GAATCTACACGCATGTATGCATGCACAAACATGTGT...GAGACCCACAGGTCTAAGAGGAGAGGCAGAGCCAGTGTGCCACCAGGCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CAA 90 bp GGCAGCACCTCACTGCTCAATCTCCAGGCTGCCAGGTGGCTTCGGTGGCTCTGGCCCGGGAAGAGGGCCTaGCCCTGGAGCAGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: GSTSLLNLQAARWLRWLWPGKRA*PWSSSA
Trigger: GGCTGAGCTGCTCCAGGGCAAGGCCCTCTTCCCGGG...CCAGAGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAGCAGTGAGGTGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR CAA 90 bp GCACACCCACCCCGGCTCCAGCTTCTTGCCAGATATGGCTGCTGGCCTTGGGCGCTGAGACCTCTCCCTTaGAGTCTCCCGGGGTCCCGG +
Preference number: 3 (lower is better)
Translates to: AHPPRLQLLARYGCWPWALRPLP*SLPGSR
Trigger: CCGGGACCCCGGGAGACTCAAAGGGAGAGGTCTCAG...CGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 72 bp TGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTaGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCT +
Preference number: 3 (lower is better)
Translates to: CGRCLSRKPGQL*KGAGPSPSTGS
Trigger: AGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
3UTR-3UTR CAA 90 bp TGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAGGCCCTGGTGCAGGCACTaGACACCCAGGCTTCCCTGG +
Preference number: 3 (lower is better)
Translates to: WPTGAASLKHPSRHQEPRPWCRH*TPRLPW
Trigger: CCAGGGAAGCCTGGGTGTCAAGTGCCTGCACCAGGG...CCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR GCA 72 bp GAAGGCAACAGCACACCCACCCCGGCTCCAGCTTCTTaGCAGATATGGCTGCTGGCCTTGGGCGCCCACAGA +
Preference number: 3 (lower is better)
Translates to: EGNSTPTPAPAS*QIWLLALGAHR
Trigger: TCTGTGGGCGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTGCTGTTGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR GCA 72 bp ACTGACCCACAGACCAGAGCACCTCAGATCTCCGGCTaGAGGGCCACAACGGTGGGCAGAGGTAGAGAGCGG +
Preference number: 3 (lower is better)
Translates to: TDPQTRAPQISG*RATTVGRGRER
Trigger: CCGCTCTCTACCTCTGCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGGTGCTCTGGTCTGTGGGTCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 72 bp AGCACACCCACCCCGGCTCCAGCTTCTTGCCAGATATaGCTGCTGGCCTTGGGCGCCCACAGATTCACACGC +
Preference number: 3 (lower is better)
Translates to: STPTPAPASCQI*LLALGAHRFTR
Trigger: GCGTGTGAATCTGTGGGCGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CAA 90 bp GGTGCAGGGCAGAAGTGTCCGAGTCCAAGTCCACATCCAGGTGTGCTGCCTGCCAAGGCTGACACTCCCTaGGGTCGGCCTGGGACAGAC +
Preference number: 3 (lower is better)
Translates to: GAGQKCPSPSPHPGVLPAKADTP*GRPGTD
Trigger: GTCTGTCCCAGGCCGACCCAAGGGAGTGTCAGCCTT...GGCAGGCAGCACACCTGGATGTGGACTTGGACTCGGACACTTCTGCCCTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CAA 90 bp TGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAGGGGTGGCTCTGGGGGCTaGAAGCTGAGGACTTCCTGG +
Preference number: 3 (lower is better)
Translates to: WPTGAASLKHPSRHQEPRGGSGG*KLRTSW
Trigger: CCAGGAAGTCCTCAGCTTCAAGCCCCCAGAGCCACC...CCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR CAA 90 bp GCCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCCGGCTCCAGCTTCTaGCCAGATATGGCTGCTGGC +
Preference number: 3 (lower is better)
Translates to: ALWPTGAASLKHPSRHQEPGSSF*PDMAAG
Trigger: GCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGG...TTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CAA 90 bp CAGCTCTGGGCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCCTGGGACCCATGCTCATGTGGTaGCCCTTTGGCCCACTGGAG +
Preference number: 3 (lower is better)
Translates to: QLWAGSRLRGYWISSILGPMLMW*PFGPLE
Trigger: CTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGG...TCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR GCA 72 bp TGTGGGTCCCACATCCAAGGAGAAAGCCCCTGCCCATaGTCATGTGGTTGCCCTTTGGCCCACTGGAGCCGC +
Preference number: 3 (lower is better)
Translates to: CGSHIQGESPCP*SCGCPLAHWSR
Trigger: GCGGCTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGACCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR GCA 72 bp GTGTCCGAGTCCAAGTCCACATCCAGGTGTGCTGCCTaGCCTAGCGTCCTCAAGGCCAAACCACCCACCCAC +
Preference number: 3 (lower is better)
Translates to: VSESKSTSRCAA*PSVLKAKPPTH
Trigger: GTGGGTGGGTGGTTTGGCCTTGAGGACGCTAGGGCAGGCAGCACACCTGGATGTGGACTTGGACTCGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 72 bp CAGCGTGCGCTCCTTGGCCTCAACGCTCTCATCATATaGCTCGGCCTCTGGCTCATCCTCGGGGTCGTGGTA +
Preference number: 3 (lower is better)
Translates to: QRALLGLNALII*LGLWLILGVVV
Trigger: TACCACGACCCCGAGGATGAGCCAGAGGCCGAGCCATATGATGAGAGCGTTGAGGCCAAGGAGCGCACGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR GCA 72 bp AGCTGCTGTGGGTCCCACATCCAAGGAGAAAGCCCCTaGCCATGCTCATGTGGTTGCCCTTTGGCCCACTGG +
Preference number: 3 (lower is better)
Translates to: SCCGSHIQGESP*PCSCGCPLAHW
Trigger: CCAGTGGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGACCCACAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 72 bp GGTGGCACACTGGCTCTGCCTCTCCTCTTAGACCTGTaGGTCTCAGCAGTGACCAAGACAGCCCCCTACCTC +
Preference number: 3 (lower is better)
Translates to: GGTLALPLLLDL*VSAVTKTAPYL
Trigger: GAGGTAGGGGGCTGTCTTGGTCACTGCTGAGACCCACAGGTCTAAGAGGAGAGGCAGAGCCAGTGTGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 72 bp CCCTGCCCATGCTCATGTGGTTGCCCTTTGGCCCACTaGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCA +
Preference number: 3 (lower is better)
Translates to: PCPCSCGCPLAH*SRQSETPLKAS
Trigger: TGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 72 bp CTCCACGGAAGATGCTGCTCAGGTCCTTCTGGGGCATaGGGGGCAGGGACTGGATATATGTCCGGGCGTGTT +
Preference number: 3 (lower is better)
Translates to: LHGRCCSGPSGA*GAGTGYMSGRV
Trigger: AACACGCCCGGACATATATCCAGTCCCTGCCCCCCATGCCCCAGAAGGACCTGAGCAGCATCTTCCGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR CCA 72 bp CGGCTCCAGCTTCTTGCCAGATATGGCTGCTGGCCTTaGGCGCCCACAGATTCACACGCACCACATCACATG +
Preference number: 3 (lower is better)
Translates to: RLQLLARYGCWP*APTDSHAPHHM
Trigger: CATGTGATGTGGTGCGTGTGAATCTGTGGGCGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 72 bp CTCAATCTCCAGGCTGCCAGGTGGCTTCGGTGGCTCTaGGGGCTTGAAGCTGAGGACTTCCTGGTAAGTGAG +
Preference number: 3 (lower is better)
Translates to: LNLQAARWLRWL*GLEAEDFLVSE
Trigger: CTCACTTACCAGGAAGTCCTCAGCTTCAAGCCCCCAGAGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR CAA 90 bp CTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACTGGCCCATGCTCATGTGGTaGCCCTTTGGCCCACTGGAG +
Preference number: 3 (lower is better)
Translates to: LFSFDTWWLSLPSLVAHWPMLMW*PFGPLE
Trigger: CTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGG...CCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CAA 90 bp CTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACTGGTCCAGCGTGCGCTCCTaGGCCTCAACGCTCTCATCA +
Preference number: 3 (lower is better)
Translates to: LFSFDTWWLSLPSLVAHWSSVRS*ASTLSS
Trigger: TGATGAGAGCGTTGAGGCCAAGGAGCGCACGCTGGA...CCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR-3UTR CAA 90 bp TGCCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAGTTCTGAGGAGATTTTaGCCAGAACCTCAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: CPLAHWSRQSETPLKASGVLRRF*PEPQGW
Trigger: CCAGCCCTGAGGTTCTGGCAAAAATCTCCTCAGAAC...TCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417877.1
3UTR TCA 72 bp CTGGATCAGCTCCATCCTGGGACAAGGAAAGAGGACTaGCCCACAGACCAGAGCACCTCAGATCTCCGGCTG +
Preference number: 3 (lower is better)
Translates to: LDQLHPGTRKED*PTDQSTSDLRL
Trigger: CAGCCGGAGATCTGAGGTGCTCTGGTCTGTGGGTCAGTCCTCTTTCCTTGTCCCAGGATGGAGCTGATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 72 bp ACTCAGCTCTGGGCAGGGTCCCGTCTCCGAGGTTACTaGATCAGCTCCATCCTGGGACAAGGAAAGAGGACT +
Preference number: 3 (lower is better)
Translates to: TQLWAGSRLRGY*ISSILGQGKRT
Trigger: AGTCCTCTTTCCTTGTCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CAA 90 bp ACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGACAGGAGGAGGCAGCTTTTCTCATTaGACACCTGGTGGTTGTCCC +
Preference number: 3 (lower is better)
Translates to: TPQSGPSGECSSQKRTGGGSFSH*TPGGCP
Trigger: GGGACAACCACCAGGTGTCAAATGAGAAAAGCTGCC...TCCTCCTGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR TCA 72 bp GATTCACACGCACCACATCACATGTGCCCTGACATATaGACACGGGGAGTGCACGCTCATCCACACGTGCCC +
Preference number: 3 (lower is better)
Translates to: DSHAPHHMCPDI*TRGVHAHPHVP
Trigger: GGGCACGTGTGGATGAGCGTGCACTCCCCGTGTTCATATGTCAGGGCACATGTGATGTGGTGCGTGTGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 72 bp ACACAAGACTCCAGGCAGCTTTTCTCATTTGACACCTaGTGGTTGTCCCTGCCCAGCCTGGTGGCACACTGG +
Preference number: 3 (lower is better)
Translates to: TQDSRQLFSFDT*WLSLPSLVAHW
Trigger: CCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAGCTGCCTGGAGTCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CAA 90 bp CTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACTGGGGCAGCTTTTCTCATTaGACACCTGGTGGTTGTCCC +
Preference number: 3 (lower is better)
Translates to: LFSFDTWWLSLPSLVAHWGSFSH*TPGGCP
Trigger: GGGACAACCACCAGGTGTCAAATGAGAAAAGCTGCC...CCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR TCA 72 bp GCCCACAGATTCACACGCACCACATCACATGTGCCCTaGCATATGAACACGGGGAGTGCACGCTCATCCACA +
Preference number: 3 (lower is better)
Translates to: AHRFTRTTSHVP*HMNTGSARSST
Trigger: TGTGGATGAGCGTGCACTCCCCGTGTTCATATGTCAGGGCACATGTGATGTGGTGCGTGTGAATCTGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CCA 72 bp ACTCAGCTCTGGGCAGGGTCCCGTCTCCGAGGTTACTaGATCAGCTCCATCATGCGTGTAGATTCTCCTGAA +
Preference number: 3 (lower is better)
Translates to: TQLWAGSRLRGY*ISSIMRVDSPE
Trigger: TTCAGGAGAATCTACACGCATGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395764.5
3UTR TCA 72 bp TTACTGGATCAGCTCCATCATGCGTGTAGATTCTCCTaGAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACC +
Preference number: 3 (lower is better)
Translates to: LLDQLHHACRFS*RRGVLGQKSVT
Trigger: GGTCACAGACTTCTGGCCTAGGACCCCTCGCCTTCAGGAGAATCTACACGCATGATGGAGCTGATCCAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395764.5
3UTR TCA 72 bp CATGTTTGTGCATGCATACATGCGTGTAGATTCTCCTaGAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACC +
Preference number: 3 (lower is better)
Translates to: HVCACIHACRFS*RRGVLGQKSVT
Trigger: GGTCACAGACTTCTGGCCTAGGACCCCTCGCCTTCAGGAGAATCTACACGCATGTATGCATGCACAAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR-3UTR CAA 90 bp TCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCCCCAGATATCCACTGTTaGGTTGTAATGCATCCAGTT +
Preference number: 3 (lower is better)
Translates to: SHIQGESPCPCSCGCPLAPDIHC*VVMHPV
Trigger: AACTGGATGCATTACAACCAAACAGTGGATATCTGG...GGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR GCA 90 bp GCACACCCACCCCGGCTCCAGCTTCTTGCCAGATATGGCTGCTGGCCTTGGGCGCAGGCTCTCAGGGGCTaGTGGGCAGCACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: AHPPRLQLLARYGCWPWAQALRG*WAAPHC
Trigger: GCAGTGAGGTGCTGCCCAGCAGCCCCTGAGAGCCTG...CGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp GGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCAGGCTCTCAGGGGCTaGTGGGCAGCACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GASRGNQASCGRVQAQAPQALRG*WAAPHC
Trigger: GCAGTGAGGTGCTGCCCAGCAGCCCCTGAGAGCCTG...AGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp GGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTCCAGGCTCTCAGGGGCTaGTGGGCAGCACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GNQASCGRVQAQAPPQALQALRG*WAAPHC
Trigger: GCAGTGAGGTGCTGCCCAGCAGCCCCTGAGAGCCTG...GAGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GAGGTCACCCCCTTTCCAGGGCAGAGCCACACCCCCAACTCAGCTCTGGGCAGGTGTCCCTGCCCAGCCTaGTGGCACACTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: EVTPFPGQSHTPNSALGRCPCPA*WHTGSA
Trigger: GGCAGAGCCAGTGTGCCACCAGGCTGGGCAGGGACA...CCTGCCCAGAGCTGAGTTGGGGGTGTGGCTCTGCCCTGGAAAGGGGGTGACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp CACACCCACCCCGGCTCCAGCTTCTTGCCAGATATGGCTGCTGGCCTTGGGCGCGCAGGGCCACAACGGTaGGCAGAGGTAGAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: HTHPGSSFLPDMAAGLGRAGPQR*AEVESG
Trigger: CCCGCTCTCTACCTCTGCCCACCGTTGTGGCCCTGC...GCGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp CACACCCACCCCGGCTCCAGCTTCTTGCCAGATATGGCTGCTGGCCTTGGGCGCACACCCAGGCTTCCCTaGGCCCCTCGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: HTHPGSSFLPDMAAGLGRTPRLP*APRGKR
Trigger: CCTCTTGCCTCGAGGGGCCCAGGGAAGCCTGGGTGT...GCGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp GGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTCGGTCGTGGTACTGGCTaGAGTAGGCGTGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GNQASCGRVQAQAPPQALGRGTG*SRRGPV
Trigger: CACTGGCCCACGCCTACTTCAGCCAGTACCACGACC...GAGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR TCA 90 bp GTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCGGTCGTGGTACTGGCTaGAGTAGGCGTGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: VWEVPLEETRPAVEGCRPGRGTG*SRRGPV
Trigger: CACTGGCCCACGCCTACTTCAGCCAGTACCACGACC...GGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR TCA 90 bp CCTCAGATCTCCGGCTGCAGGGCCACAACGGTGGGCAGAGGTAGAGAGCGGGCCGCGTGTAGATTCTCCTaGAGGCGAGGGGTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: PQISGCRATTVGRGRERAACRFS*RRGVLG
Trigger: GCCTAGGACCCCTCGCCTTCAGGAGAATCTACACGC...GGCCCGCTCTCTACCTCTGCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp GGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTTCCAGGTGTGCTGCCTaGCCTAGCGTCCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GASRGNQASCGRVQAQAPSRCAA*PSVLKA
Trigger: GGCCTTGAGGACGCTAGGGCAGGCAGCACACCTGGA...AGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp CCTCAGATCTCCGGCTGCAGGGCCACAACGGTGGGCAGAGGTAGAGAGCGGGCCCGGCGCCCATCAGGGTaGTCACCAAGTACACTTCGC +
Preference number: 4 (lower is better)
Translates to: PQISGCRATTVGRGRERARRPSG*SPSTLR
Trigger: GCGAAGTGTACTTGGTGACCACCCTGATGGGCGCCG...GGCCCGCTCTCTACCTCTGCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp TGCCCAGCCTGGTGGCACACTGGCTCTGCCTCTCCTCTTAGACCTGTGGGTCTCCTCCAGGCTGCCAGGTaGCTTCGGTGGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: CPAWWHTGSASPLRPVGLLQAAR*LRWLWG
Trigger: CCCCCAGAGCCACCGAAGCCACCTGGCAGCCTGGAG...GAGACCCACAGGTCTAAGAGGAGAGGCAGAGCCAGTGTGCCACCAGGCTGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp AGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTTGTCCCTGCCCAGCCTaGTGGCACACTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RKPGQLWKGAGPSPSTGSCPCPA*WHTGSA
Trigger: GGCAGAGCCAGTGTGCCACCAGGCTGGGCAGGGACA...AGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp TGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAACACCCAGGCTTCCCTaGGCCCCTCGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: CGRCLSRKPGQLWKGAGPTPRLP*APRGKR
Trigger: CCTCTTGCCTCGAGGGGCCCAGGGAAGCCTGGGTGT...TGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
3UTR CAA 72 bp GGAAGGCAACAGCACACCCACCCCGGCTCCAGCTTCTaGCCAGATATGGCTGCTGGCCTTGGGCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GRQQHTHPGSSF*PDMAAGLGRPQ
Trigger: CTGTGGGCGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTGCTGTTGCCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp GGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGTCAGGTCCCGGTGGATaGTCCCGGCCGAGTGGATGT +
Preference number: 4 (lower is better)
Translates to: GVWEVPLEETRPAVEGCRSGPGG*SRPSGC
Trigger: ACATCCACTCGGCCGGGATCATCCACCGGGACCTGA...CCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000395764.5
CDS-3UTR TCA 90 bp GAGGTCACCCCCTTTCCAGGGCAGAGCCACACCCCCAACTCAGCTCTGGGCAGGGCGTGTAGATTCTCCTaGAGGCGAGGGGTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: EVTPFPGQSHTPNSALGRACRFS*RRGVLG
Trigger: GCCTAGGACCCCTCGCCTTCAGGAGAATCTACACGC...CCTGCCCAGAGCTGAGTTGGGGGTGTGGCTCTGCCCTGGAAAGGGGGTGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp GGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTGCTCAATCTCCAGGCTaGCAGGTGGCTTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GASRGNQASCGRVQAQAPAQSPG*QVASVA
Trigger: AGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAGC...AGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp GAGGTCACCCCCTTTCCAGGGCAGAGCCACACCCCCAACTCAGCTCTGGGCAGGACGCTCATCCACACGTaGCCACACACACCCACGGGT +
Preference number: 4 (lower is better)
Translates to: EVTPFPGQSHTPNSALGRTLIHT*PHTPTG
Trigger: ACCCGTGGGTGTGTGTGGGCACGTGTGGATGAGCGT...CCTGCCCAGAGCTGAGTTGGGGGTGTGGCTCTGCCCTGGAAAGGGGGTGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp TGCCCTAGCGTCCTCAAGGCCAAACCACCCACCCACCCACCCCCAGCCTCAGGACTTGCCAGATATGGCTaGTGGCCTTGGGCGCCCACA +
Preference number: 4 (lower is better)
Translates to: CPSVLKAKPPTHPPPASGLARYG*WPWAPT
Trigger: TGTGGGCGCCCAAGGCCAGCAGCCATATCTGGCAAG...TCCTGAGGCTGGGGGTGGGTGGGTGGGTGGTTTGGCCTTGAGGACGCTAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp TGCCCAGCCTGGTGGCACACTGGCTCTGCCTCTCCTCTTAGACCTGTGGGTCTCCCTCAGATCTCCGGCTaGAGGGCCACAACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CPAWWHTGSASPLRPVGLPQISG*RATTVG
Trigger: GCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGG...GAGACCCACAGGTCTAAGAGGAGAGGCAGAGCCAGTGTGCCACCAGGCTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CAGCTCTGGGCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCCTGGGACCTCAGATCTCCGGCTaGAGGGCCACAACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QLWAGSRLRGYWISSILGPQISG*RATTVG
Trigger: GCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGG...TCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp TGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAGCGTGGATCAGCGACTaGAAGGGGCGCGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: CGRCLSRKPGQLWKGAGPAWISD*KGRDSF
Trigger: GAAGCTGTCGCGCCCCTTCCAGTCGCTGATCCACGC...TGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTATGGCCAGGGGGTTaGCTCCACGGAAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: EVPLEETRPAVEGCRPKPLWPGG*LHGRCC
Trigger: GCAGCATCTTCCGTGGAGCCAACCCCCTGGCCATAG...GGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTCATATGGCTCGGCCTCTaGCTCATCCTCGGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: GNQASCGRVQAQAPPQALIWLGL*LILGVV
Trigger: CACGACCCCGAGGATGAGCCAGAGGCCGAGCCATAT...GAGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTTGGCTTCGGTGGCTCTaGGGGCTTGAAGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: GASRGNQASCGRVQAQAPWLRWL*GLEAED
Trigger: GTCCTCAGCTTCAAGCCCCCAGAGCCACCGAAGCCA...AGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp AAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCCTCCAGGCTGCCAGGTaGCTTCGGTGGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KARGPRPEVCDHRSVGGALQAAR*LRWLWG
Trigger: CCCCCAGAGCCACCGAAGCCACCTGGCAGCCTGGAG...GGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp CTGGGCAGCACCTCACTGCTCAATCTCCAGGCTGCCAGGTGGCTTCGGTGGCTCGCTCTCAGGGGCTGCTaGGCAGCACCTCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: LGSTSLLNLQAARWLRWLALRGC*AAPHCS
Trigger: TGAGCAGTGAGGTGCTGCCCAGCAGCCCCTGAGAGC...GAGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAGCAGTGAGGTGCTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR CCA 90 bp GAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCAGGCTGACACTCCCTTaGGTCGGCCTGGGACAGACA +
Preference number: 4 (lower is better)
Translates to: EVPLEETRPAVEGCRPKPRLTLP*VGLGQT
Trigger: TGTCTGTCCCAGGCCGACCCAAGGGAGTGTCAGCCT...GGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCCATGTGGTTGCCCTTTaGCCCACTGGAGCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: VWEVPLEETRPAVEGCRPHVVAL*PTGAAS
Trigger: ACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATG...GGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp AAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTGGACGTGGCCGGCGTaGAGACGTCCAGAAGCCCGA +
Preference number: 4 (lower is better)
Translates to: KARGPRPEVCDHRSVGGAWTWPA*RRPEAR
Trigger: TCGGGCTTCTGGACGTCTTCACGCCGGCCACGTCCA...GGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR TCA 90 bp GTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCACACACACCCACGGGTaGACACAAGACTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VWEVPLEETRPAVEGCRPTHTHG*TQDSRQ
Trigger: CTGCCTGGAGTCTTGTGTTCACCCGTGGGTGTGTGT...GGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CAGCTCTGGGCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCCTGGGAGCTCCCGGTACGTTCTaGGCGCGTGGATCAGCGACT +
Preference number: 4 (lower is better)
Translates to: QLWAGSRLRGYWISSILGAPGTF*ARGSAT
Trigger: AGTCGCTGATCCACGCGCGCAGAACGTACCGGGAGC...TCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp AGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCCGGGAAGAGGGCCTTaGCCTGGAGCAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RRGVLGQKSVTIGVWEVPPGRGP*PGAAQP
Trigger: TGGCTGAGCTGCTCCAGGGCAAGGCCCTCTTCCCGG...AGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp GGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTCCTCCACGGAAGATGCTaGTCAGGTCCTTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GNQASCGRVQAQAPPQALLHGRC*SGPSGA
Trigger: TGCCCCAGAAGGACCTGAGCAGCATCTTCCGTGGAG...GAGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp GCTGAAGTAGGCGTGGGCCAGTGCCTCAGCTGCACTGACCCTCTGGTCACTGTCTCCACTCCTCCAGCGTaGGCTCCTTGGCCTCAACGC +
Preference number: 4 (lower is better)
Translates to: AEVGVGQCLSCTDPLVTVSTPPA*APWPQR
Trigger: GCGTTGAGGCCAAGGAGCGCACGCTGGAGGAGTGGA...GACAGTGACCAGAGGGTCAGTGCAGCTGAGGCACTGGCCCACGCCTACTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR GCA 90 bp GGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTTGGGCAGCACCTCACTaGTCAATCTCCAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GASRGNQASCGRVQAQAPWAAPH*SISRLP
Trigger: TGGCAGCCTGGAGATTGAGCAGTGAGGTGCTGCCCA...AGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp GGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTCTGGGCAGCACCTCACTaGTCAATCTCCAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GNQASCGRVQAQAPPQALWAAPH*SISRLP
Trigger: TGGCAGCCTGGAGATTGAGCAGTGAGGTGCTGCCCA...GAGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp CCTCAGATCTCCGGCTGCAGGGCCACAACGGTGGGCAGAGGTAGAGAGCGGGCCTATGAACACGGGGAGTaGACGCTCATCCACACGTGC +
Preference number: 4 (lower is better)
Translates to: PQISGCRATTVGRGRERAYEHGE*TLIHTC
Trigger: GCACGTGTGGATGAGCGTGCACTCCCCGTGTTCATA...GGCCCGCTCTCTACCTCTGCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp GACCCACAGACCAGAGCACCTCAGATCTCCGGCTGCAGGGCCACAACGGTGGGCCCAGCCTCAGGAAGCTaGTGTGGGTCCCACATCCAA +
Preference number: 4 (lower is better)
Translates to: DPQTRAPQISGCRATTVGPASGS*CGSHIQ
Trigger: TTGGATGTGGGACCCACAGCAGCTTCCTGAGGCTGG...GCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGGTGCTCTGGTCTGTGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp TGGGCAGCACCTCACTGCTCAATCTCCAGGCTGCCAGGTGGCTTCGGTGGCTCTTCCAGGTGTGCTGCCTaGCCTAGCGTCCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: WAAPHCSISRLPGGFGGSSRCAA*PSVLKA
Trigger: GGCCTTGAGGACGCTAGGGCAGGCAGCACACCTGGA...AGAGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAGCAGTGAGGTGCTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR CCA 90 bp AGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTTACGTTCTGCGCGCGTaGATCAGCGACTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RKPGQLWKGAGPSPSTGSYVLRA*ISDWKG
Trigger: CCCCTTCCAGTCGCTGATCCACGCGCGCAGAACGTA...AGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GGCAGCACCTCACTGCTCAATCTCCAGGCTGCCAGGTGGCTTCGGTGGCTCTGGCGGCGCCCATCAGGGTaGTCACCAAGTACACTTCGC +
Preference number: 4 (lower is better)
Translates to: GSTSLLNLQAARWLRWLWRRPSG*SPSTLR
Trigger: GCGAAGTGTACTTGGTGACCACCCTGATGGGCGCCG...CCAGAGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAGCAGTGAGGTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR CCA 90 bp CACACCCACCCCGGCTCCAGCTTCTTGCCAGATATGGCTGCTGGCCTTGGGCGCAAGAGGGCCTTGCCCTaGAGCAGCTCAGCCATGATG +
Preference number: 4 (lower is better)
Translates to: HTHPGSSFLPDMAAGLGRKRALP*SSSAMM
Trigger: CATCATGGCTGAGCTGCTCCAGGGCAAGGCCCTCTT...GCGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GACCCACAGACCAGAGCACCTCAGATCTCCGGCTGCAGGGCCACAACGGTGGGCTTCCAAGGAGGTCTATaGCCAGGGGGTTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: DPQTRAPQISGCRATTVGFQGGL*PGGWLH
Trigger: GTGGAGCCAACCCCCTGGCCATAGACCTCCTTGGAA...GCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGGTGCTCTGGTCTGTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGATATGGCTCGGCCTCTaGCTCATCCTCGGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: GVWEVPLEETRPAVEGCRIWLGL*LILGVV
Trigger: CACGACCCCGAGGATGAGCCAGAGGCCGAGCCATAT...CCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAACTCCAGGCTGCCAGGTaGCTTCGGTGGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VTIGVWEVPLEETRPAVELQAAR*LRWLWG
Trigger: CCCCCAGAGCCACCGAAGCCACCTGGCAGCCTGGAG...TTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GCACACCCACCCCGGCTCCAGCTTCTTGCCAGATATGGCTGCTGGCCTTGGGCGTGCCCTTTGGCCCACTaGAGCCGCCAGTCTGAAACA +
Preference number: 4 (lower is better)
Translates to: AHPPRLQLLARYGCWPWACPLAH*SRQSET
Trigger: TGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCA...CGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GCCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAAACACCCAGGCTTCCCTaGGCCCCTCGAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ALWPTGAASLKHPSRHQETPRLP*APRGKR
Trigger: CCTCTTGCCTCGAGGGGCCCAGGGAAGCCTGGGTGT...TTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp AGAGCACCTCAGATCTCCGGCTGCAGGGCCACAACGGTGGGCAGAGGTAGAGAGTCAGGTCCTACCCGGTaGATGATCCCGGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: RAPQISGCRATTVGRGRESGPTR*MIPAEW
Trigger: CCACTCGGCCGGGATCATCCACCGGGTAGGACCTGA...CTCTCTACCTCTGCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGGTGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR TCA 90 bp CATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGGGTCGTGGTACTGGCTaGAGTAGGCGTGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: HRSVGGASRGNQASCGRVGRGTG*SRRGPV
Trigger: CACTGGCCCACGCCTACTTCAGCCAGTACCACGACC...CACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR TCA 90 bp GGTGCAGGGCAGAAGTGTCCGAGTCCAAGTCCACATCCAGGTGTGCTGCCTGCCTGTGGGTCTCAGCAGTaGCCAAGACAGCCCCCTACC +
Preference number: 4 (lower is better)
Translates to: GAGQKCPSPSPHPGVLPACGSQQ*PRQPPT
Trigger: GGTAGGGGGCTGTCTTGGTCACTGCTGAGACCCACA...GGCAGGCAGCACACCTGGATGTGGACTTGGACTCGGACACTTCTGCCCTGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp GTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCATGTGCCCTGACATATaGACACGGGGAGTGCACGCT +
Preference number: 4 (lower is better)
Translates to: VWEVPLEETRPAVEGCRPMCPDI*TRGVHA
Trigger: AGCGTGCACTCCCCGTGTTCATATGTCAGGGCACAT...GGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp TGCCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAGCTCCCGGTACGTTCTaGGCGCGTGGATCAGCGACT +
Preference number: 4 (lower is better)
Translates to: CPLAHWSRQSETPLKASGAPGTF*ARGSAT
Trigger: AGTCGCTGATCCACGCGCGCAGAACGTACCGGGAGC...TCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp GGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGACCGGGAAGAGGGCCTTaGCCTGGAGCAGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GPRPEVCDHRSVGGASRGPGRGP*PGAAQP
Trigger: TGGCTGAGCTGCTCCAGGGCAAGGCCCTCTTCCCGG...TCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp CCAGAAGAGGACAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCTCCACTCCTCCAGCGTaGGCTCCTTGGCCTCAACGC +
Preference number: 4 (lower is better)
Translates to: PEEDRRTKVGPGTLVPRLSTPPA*APWPQR
Trigger: GCGTTGAGGCCAAGGAGCGCACGCTGGAGGAGTGGA...GAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTGTCCTCTTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp GGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGGCCCAGGGACACTTGTaGCCAGACTCCTACACATGG +
Preference number: 4 (lower is better)
Translates to: GVWEVPLEETRPAVEGCRAQGHL*PDSYTW
Trigger: CCATGTGTAGGAGTCTGGGCACAAGTGTCCCTGGGC...CCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CACACCCACCCCGGCTCCAGCTTCTTGCCAGATATGGCTGCTGGCCTTGGGCGCGGTCCCAGTGGAGAGTaGAGTAGCCAGAAGAGGACA +
Preference number: 4 (lower is better)
Translates to: HTHPGSSFLPDMAAGLGRGPSGE*SSQKRT
Trigger: TGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACC...GCGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCCTACACATGGCCCTGGTGGTTGTCCCTaGCCAGCCTGGTGGCACACT +
Preference number: 4 (lower is better)
Translates to: QEDQGRPRDTCAQTPTHGPGGCP*PAWWHT
Trigger: AGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGG...GCCATGTGTAGGAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp AGAGCACCTCAGATCTCCGGCTGCAGGGCCACAACGGTGGGCAGAGGTAGAGAGACGCTCATCCACACGTaGCCACACACACCCACGGGT +
Preference number: 4 (lower is better)
Translates to: RAPQISGCRATTVGRGRETLIHT*PHTPTG
Trigger: ACCCGTGGGTGTGTGTGGGCACGTGTGGATGAGCGT...CTCTCTACCTCTGCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGGTGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp GGTGCAGGGCAGAAGTGTCCGAGTCCAAGTCCACATCCAGGTGTGCTGCCTGCCCCGGCTCCAGCTTCTTaGCAGATATGGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GAGQKCPSPSPHPGVLPAPAPAS*QIWLLA
Trigger: GGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGG...GGCAGGCAGCACACCTGGATGTGGACTTGGACTCGGACACTTCTGCCCTGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp GACCCACAGACCAGAGCACCTCAGATCTCCGGCTGCAGGGCCACAACGGTGGGCCAAGGAGAAAGCCCCTaGCCATGCTCATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: DPQTRAPQISGCRATTVGQGESP*PCSCGC
Trigger: GCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTG...GCCCACCGTTGTGGCCCTGCAGCCGGAGATCTGAGGTGCTCTGGTCTGTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp AGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTGCGTGGATCAGCGACTaGAAGGGGCGCGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: RRGVLGQKSVTIGVWEVPAWISD*KGRDSF
Trigger: GAAGCTGTCGCGCCCCTTCCAGTCGCTGATCCACGC...AGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp AAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCGCGTGGATCAGCGACTaGAAGGGGCGCGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: KARGPRPEVCDHRSVGGAAWISD*KGRDSF
Trigger: GAAGCTGTCGCGCCCCTTCCAGTCGCTGATCCACGC...GGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCTCGTCGCTCAGCGCCTaGCACTTGACGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: EVPLEETRPAVEGCRPKPSSLSA*HLTMLF
Trigger: GAACAACATCGTCAAGTGCCAGGCGCTGAGCGACGA...GGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GGTGCAGGGCAGAAGTGTCCGAGTCCAAGTCCACATCCAGGTGTGCTGCCTGCCGGTCCTTCTGGGGCATaGGGGGCAGGGACTGGATAT +
Preference number: 4 (lower is better)
Translates to: GAGQKCPSPSPHPGVLPAGPSGA*GAGTGY
Trigger: ATATCCAGTCCCTGCCCCCCATGCCCCAGAAGGACC...GGCAGGCAGCACACCTGGATGTGGACTTGGACTCGGACACTTCTGCCCTGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp CTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACATTCCAAGGAGGTCTATaGCCAGGGGGTTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSRKPGQLWKGAGPSPSTFQGGL*PGGWLH
Trigger: GTGGAGCCAACCCCCTGGCCATAGACCTCCTTGGAA...TGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GCCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAAGCCAGGTGGCTTCGGTaGCTCTGGGGGCTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ALWPTGAASLKHPSRHQEARWLR*LWGLEA
Trigger: AGCTTCAAGCCCCCAGAGCCACCGAAGCCACCTGGC...TTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp CTCCTCCAGCGTGCGCTCCTTGGCCTCAACGCTCTCATCATATGGCTCGGCCTCAAACCAGGCCAGCTGTaGAAGGGTGCAGGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LLQRALLGLNALIIWLGLKPGQL*KGAGPS
Trigger: GCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTT...GAGGCCGAGCCATATGATGAGAGCGTTGAGGCCAAGGAGCGCACGCTGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR CCA 90 bp AGCGTGCGCTCCTTGGCCTCAACGCTCTCATCATATGGCTCGGCCTCTGGCTCATCCCTTGGGTCGGCCTaGGACAGACAGGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: SVRSLASTLSSYGSASGSSLGSA*DRQGNS
Trigger: GGAGTTCCCCTGTCTGTCCCAGGCCGACCCAAGGGA...TGAGCCAGAGGCCGAGCCATATGATGAGAGCGTTGAGGCCAAGGAGCGCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR CCA 90 bp CTGGGACAAGGAAAGAGGACTGACCCACAGACCAGAGCACCTCAGATCTCCGGCCCCTGCCCAGCCTGGTaGCACACTGGCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LGQGKRTDPQTRAPQISGPCPAW*HTGSAS
Trigger: AGAGGCAGAGCCAGTGTGCCACCAGGCTGGGCAGGG...GCCGGAGATCTGAGGTGCTCTGGTCTGTGGGTCAGTCCTCTTTCCTTGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp TGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAGGGCTTCTTGCCAGATATaGCTGCTGGCCTTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: WPTGAASLKHPSRHQEPRASCQI*LLALGA
Trigger: GGCGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGC...CCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCTGCCCATGCTCATGTaGTTGCCCTTTGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GVWEVPLEETRPAVEGCRLPMLM*LPFGPL
Trigger: CAGTGGGCCAAAGGGCAACCACATGAGCATGGGCAG...CCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
3UTR CAA 72 bp GGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTaGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTC +
Preference number: 4 (lower is better)
Translates to: GESPCPCSCGCP*AHWSRQSETPL
Trigger: GAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp CTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACTGGTGGACGTGGCCGGCGTaGAGACGTCCAGAAGCCCGA +
Preference number: 4 (lower is better)
Translates to: LFSFDTWWLSLPSLVAHWWTWPA*RRPEAR
Trigger: TCGGGCTTCTGGACGTCTTCACGCCGGCCACGTCCA...CCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp CTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACATGCCCACCACTTCCATaGTGCGCTTCAGCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: LSRKPGQLWKGAGPSPSTCPPLP*CASAGQ
Trigger: TTGACCAGCTGAAGCGCATCATGGAAGTGGTGGGCA...TGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR TCA 90 bp AAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCGTGCCTCAGCTGCACTaGCCCTCTGGTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: KARGPRPEVCDHRSVGGAVPQLH*PSGHCP
Trigger: TGGACAGTGACCAGAGGGTCAGTGCAGCTGAGGCAC...GGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR TCA 90 bp AAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCGCGTGTAGATTCTCCTaGAGGCGAGGGGTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: KARGPRPEVCDHRSVGGAACRFS*RRGVLG
Trigger: GCCTAGGACCCCTCGCCTTCAGGAGAATCTACACGC...GGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR TCA 90 bp GGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGAAGAGAGCCCAAGGCTaGCACTCCCTTGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GQKSVTIGVWEVPLEETRKRAQG*HSLGSA
Trigger: GGCCGACCCAAGGGAGTGTCAGCCTTGGGCTCTCTT...CCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp GTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAAAGAGAGCCCAAGGCTaGCACTCCCTTGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: VTIGVWEVPLEETRPAVEKRAQG*HSLGSA
Trigger: GGCCGACCCAAGGGAGTGTCAGCCTTGGGCTCTCTT...TTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp CTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAACAAGGAAAGAGGACTaGCCCACAGACCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: LSRKPGQLWKGAGPSPSTTRKED*PTDQST
Trigger: GGTGCTCTGGTCTGTGGGTCAGTCCTCTTTCCTTGT...TGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp CCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGACAGGAGGACCAGTCCTACCCGGTGGATaGTCCCGGCCGAGTGGATGT +
Preference number: 4 (lower is better)
Translates to: PQSGPSGECSSQKRTGGPVLPGG*SRPSGC
Trigger: ACATCCACTCGGCCGGGATCATCCACCGGGTAGGAC...TGGTCCTCCTGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR GCA 90 bp CCTCTTAGACCTGTGGGTCTCAGCAGTGACCAAGACAGCCCCCTACCTCCAGGCGGCCAGTGCCTCAGCTaGACTGACCCTCTGGTCACT +
Preference number: 4 (lower is better)
Translates to: PLRPVGLSSDQDSPLPPGGQCLS*TDPLVT
Trigger: AGTGACCAGAGGGTCAGTGCAGCTGAGGCACTGGCC...GCCTGGAGGTAGGGGGCTGTCTTGGTCACTGCTGAGACCCACAGGTCTAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCTCCACTCCTCCAGCGTaGGCTCCTTGGCCTCAACGC +
Preference number: 4 (lower is better)
Translates to: PEVCDHRSVGGASRGNQASTPPA*APWPQR
Trigger: GCGTTGAGGCCAAGGAGCGCACGCTGGAGGAGTGGA...GGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp TCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCCCCTGGTGGTTGTCCCTaGCCAGCCTGGTGGCACACT +
Preference number: 4 (lower is better)
Translates to: SHIQGESPCPCSCGCPLAPGGCP*PAWWHT
Trigger: AGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGG...GGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp TGTGGTTGCCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCACCGGCTCCAGCTTCTTaGCAGATATGGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CGCPLAHWSRQSETPLKAPAPAS*QIWLLA
Trigger: GGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGG...TGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp AGAGAGCCCAAGGCTGACACTCCCTTGGGTCGGCCTGGGACAGACAGGGGAACTCCATGCTCATGTGGTTaGCCTTTGGCCCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: REPKADTPLGRPGTDRGTPCSCG*PLAHWS
Trigger: GCTCCAGTGGGCCAAAGGGCAACCACATGAGCATGG...AGTTCCCCTGTCTGTCCCAGGCCGACCCAAGGGAGTGTCAGCCTTGGGCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp AGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTCAAGGAGAAAGCCCCTaGCCATGCTCATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: RKPGQLWKGAGPSPSTGSQGESP*PCSCGC
Trigger: GCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTG...AGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp AGAGAGCCCAAGGCTGACACTCCCTTGGGTCGGCCTGGGACAGACAGGGGAACTATTGTGCACCCCTGGTaGAGGCACTTGACACCCAGG +
Preference number: 4 (lower is better)
Translates to: REPKADTPLGRPGTDRGTIVHPW*RHLTPR
Trigger: CCTGGGTGTCAAGTGCCTGCACCAGGGGTGCACAAT...AGTTCCCCTGTCTGTCCCAGGCCGACCCAAGGGAGTGTCAGCCTTGGGCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330651.11
CDS-3UTR CCA 90 bp AAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCCGGCGCCCATCAGGGTaGTCACCAAGTACACTTCGC +
Preference number: 4 (lower is better)
Translates to: KARGPRPEVCDHRSVGGARRPSG*SPSTLR
Trigger: GCGAAGTGTACTTGGTGACCACCCTGATGGGCGCCG...GGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp AGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTGGTCCTTCTGGGGCATaGGGGGCAGGGACTGGATAT +
Preference number: 4 (lower is better)
Translates to: RRGVLGQKSVTIGVWEVPGPSGA*GAGTGY
Trigger: ATATCCAGTCCCTGCCCCCCATGCCCCAGAAGGACC...AGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp CAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCCTACACATGGCGGTCCTTCTGGGGCATaGGGGGCAGGGACTGGATAT +
Preference number: 4 (lower is better)
Translates to: QEDQGRPRDTCAQTPTHGGPSGA*GAGTGY
Trigger: ATATCCAGTCCCTGCCCCCCATGCCCCAGAAGGACC...GCCATGTGTAGGAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp AGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTATGGCCAGGGGGTTaGCTCCACGGAAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: RRGVLGQKSVTIGVWEVPLWPGG*LHGRCC
Trigger: GCAGCATCTTCCGTGGAGCCAACCCCCTGGCCATAG...AGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GCCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAAATATGGCTCGGCCTCTaGCTCATCCTCGGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: ALWPTGAASLKHPSRHQEIWLGL*LILGVV
Trigger: CACGACCCCGAGGATGAGCCAGAGGCCGAGCCATAT...TTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp TGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAGCCAGGTGGCTTCGGTaGCTCTGGGGGCTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: CDHRSVGGASRGNQASCGARWLR*LWGLEA
Trigger: AGCTTCAAGCCCCCAGAGCCACCGAAGCCACCTGGC...TCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCTCTTAGACCTGTaGGTCTCAGCAGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: EVPLEETRPAVEGCRPKPLLLDL*VSAVTK
Trigger: CTTGGTCACTGCTGAGACCCACAGGTCTAAGAGGAG...GGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp AAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTCCCTGCCCAGCCTGGTaGCACACTGGCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KSVTIGVWEVPLEETRPAPCPAW*HTGSAS
Trigger: AGAGGCAGAGCCAGTGTGCCACCAGGCTGGGCAGGG...AGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp TGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAGGTATGGCTGCTGGCCTTaGGCGCCCACAGATTCACAC +
Preference number: 4 (lower is better)
Translates to: WPTGAASLKHPSRHQEPRYGCWP*APTDSH
Trigger: GTGTGAATCTGTGGGCGCCCAAGGCCAGCAGCCATA...CCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp CCTCTTAGACCTGTGGGTCTCAGCAGTGACCAAGACAGCCCCCTACCTCCAGGCGCTTCTTGCCAGATATaGCTGCTGGCCTTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: PLRPVGLSSDQDSPLPPGASCQI*LLALGA
Trigger: GGCGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGC...GCCTGGAGGTAGGGGGCTGTCTTGGTCACTGCTGAGACCCACAGGTCTAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp CCAGAAGAGGACAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCCATGTGGTTGCCCTTTaGCCCACTGGAGCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: PEEDRRTKVGPGTLVPRLHVVAL*PTGAAS
Trigger: ACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATG...GAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTGTCCTCTTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp AGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTCGTCTCCGAGGTTACTaGATCAGCTCCATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RKPGQLWKGAGPSPSTGSRLRGY*ISSILG
Trigger: TCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACG...AGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp AAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCCGTCCAGAAGCCCGATaGCGTTCTCGTGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: KARGPRPEVCDHRSVGGARPEAR*RSRASG
Trigger: ACCTGAAGCACGAGAACGTCATCGGGCTTCTGGACG...GGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR TCA 90 bp TGCCCAGCCTGGTGGCACACTGGCTCTGCCTCTCCTCTTAGACCTGTGGGTCTCCCAAGTACACTTCGCTaGAGTCCTCGATGGACGTGG +
Preference number: 4 (lower is better)
Translates to: CPAWWHTGSASPLRPVGLPSTLR*SPRWTW
Trigger: CCACGTCCATCGAGGACTTCAGCGAAGTGTACTTGG...GAGACCCACAGGTCTAAGAGGAGAGGCAGAGCCAGTGTGCCACCAGGCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp GACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGTCAGCGCCTGGCACTTaGCGATGTTGTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: DHRSVGGASRGNQASCGRSAPGT*RCCSGR
Trigger: CCGACCTGAACAACATCGTCAAGTGCCAGGCGCTGA...CCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR TCA 90 bp GCCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAATCAGCGCCTGGCACTTaGCGATGTTGTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: ALWPTGAASLKHPSRHQESAPGT*RCCSGR
Trigger: CCGACCTGAACAACATCGTCAAGTGCCAGGCGCTGA...TTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp CTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACTGGTCAGGTCCCGGTGGATaGTCCCGGCCGAGTGGATGT +
Preference number: 4 (lower is better)
Translates to: LFSFDTWWLSLPSLVAHWSGPGG*SRPSGC
Trigger: ACATCCACTCGGCCGGGATCATCCACCGGGACCTGA...CCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330651.11
CDS-3UTR TCA 90 bp TCCTTCCACTCCTCCAGCGTGCGCTCCTTGGCCTCAACGCTCTCATCATATGGCTGTGGGTCTCAGCAGTaGCCAAGACAGCCCCCTACC +
Preference number: 4 (lower is better)
Translates to: SFHSSSVRSLASTLSSYGCGSQQ*PRQPPT
Trigger: GGTAGGGGGCTGTCTTGGTCACTGCTGAGACCCACA...GCCATATGATGAGAGCGTTGAGGCCAAGGAGCGCACGCTGGAGGAGTGGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR TCA 90 bp GAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCGCAGCTTTTCTCATTTaGCACCTGGTGGTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: EVPLEETRPAVEGCRPKPAAFLI*HLVVVP
Trigger: AGGGACAACCACCAGGTGTCAAATGAGAAAAGCTGC...GGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp GGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAGGAGAGGGAAGACACACACCCACGGGTaGACACAAGACTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GAASLKHPSRHQEPRRGKTHTHG*TQDSRQ
Trigger: CTGCCTGGAGTCTTGTGTTCACCCGTGGGTGTGTGT...CTTCCCTCTCCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTCCCGGTACGTTCTaGGCGCGTGGATCAGCGACT +
Preference number: 4 (lower is better)
Translates to: QKSVTIGVWEVPLEETRPAPGTF*ARGSAT
Trigger: AGTCGCTGATCCACGCGCGCAGAACGTACCGGGAGC...TGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp AAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCCTCCACGGAAGATGCTaGTCAGGTCCTTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: KARGPRPEVCDHRSVGGALHGRC*SGPSGA
Trigger: TGCCCCAGAAGGACCTGAGCAGCATCTTCCGTGGAG...GGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp CCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCCCTGGCTCCACGGAAGATaGTGCTCAGGTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PTSKEKAPAHAHVVALWPWLHGR*CSGPSG
Trigger: CCCAGAAGGACCTGAGCAGCATCTTCCGTGGAGCCA...GGGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGTGGCTCCACGGAAGATaGTGCTCAGGTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: HRSVGGASRGNQASCGRVWLHGR*CSGPSG
Trigger: CCCAGAAGGACCTGAGCAGCATCTTCCGTGGAGCCA...CACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp GGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAGGCCAGTGCCTCAGCTaGACTGACCCTCTGGTCACT +
Preference number: 4 (lower is better)
Translates to: GPRPEVCDHRSVGGASRGGQCLS*TDPLVT
Trigger: AGTGACCAGAGGGTCAGTGCAGCTGAGGCACTGGCC...TCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp CTGCTGTGGGTCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGGGCCAGTGCCTCAGCTaGACTGACCCTCTGGTCACT +
Preference number: 4 (lower is better)
Translates to: LLWVPHPRRKPLPMLMWLGQCLS*TDPLVT
Trigger: AGTGACCAGAGGGTCAGTGCAGCTGAGGCACTGGCC...CAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGACCCACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp GTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGCTCAATCTCCAGGCTaGCAGGTGGCTTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VTIGVWEVPLEETRPAVEAQSPG*QVASVA
Trigger: AGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAGC...TTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp CAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCCTACACATGGCTGGGCAGCACCTCACTaGTCAATCTCCAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QEDQGRPRDTCAQTPTHGWAAPH*SISRLP
Trigger: TGGCAGCCTGGAGATTGAGCAGTGAGGTGCTGCCCA...GCCATGTGTAGGAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp AAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCGCCCAGGGACACTTGTaGCCAGACTCCTACACATGG +
Preference number: 4 (lower is better)
Translates to: KARGPRPEVCDHRSVGGAAQGHL*PDSYTW
Trigger: CCATGTGTAGGAGTCTGGGCACAAGTGTCCCTGGGC...GGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp GGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAGGAGAGGGAAGCCAGCCTCAGGAAGCTaGTGTGGGTCCCACATCCAA +
Preference number: 4 (lower is better)
Translates to: GAASLKHPSRHQEPRRGKPASGS*CGSHIQ
Trigger: TTGGATGTGGGACCCACAGCAGCTTCCTGAGGCTGG...CTTCCCTCTCCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGATTGTGCACCCCTGGTaGAGGCACTTGACACCCAGG +
Preference number: 4 (lower is better)
Translates to: HRSVGGASRGNQASCGRVIVHPW*RHLTPR
Trigger: CCTGGGTGTCAAGTGCCTGCACCAGGGGTGCACAAT...CACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000395764.5
CDS-3UTR CCA 90 bp GGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGTACGTTCTGCGCGCGTaGATCAGCGACTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GQKSVTIGVWEVPLEETRYVLRA*ISDWKG
Trigger: CCCCTTCCAGTCGCTGATCCACGCGCGCAGAACGTA...CCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp CTGCTGTGGGTCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGATGATCCCGGCCGAGTaGATGTACTTCAGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LLWVPHPRRKPLPMLMWLMIPAE*MYFSPR
Trigger: GCGCGGGCTGAAGTACATCCACTCGGCCGGGATCAT...CAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGACCCACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GACAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCCTACACATGATGATCCCGGCCGAGTaGATGTACTTCAGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: DRRTKVGPGTLVPRLLHMMIPAE*MYFSPR
Trigger: GCGCGGGCTGAAGTACATCCACTCGGCCGGGATCAT...CATGTGTAGGAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp TGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGACTATGGCCAGGGGGTTaGCTCCACGGAAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: CDHRSVGGASRGNQASCGLWPGG*LHGRCC
Trigger: GCAGCATCTTCCGTGGAGCCAACCCCCTGGCCATAG...TCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp CTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAAACGCTCTCATCATATaGCTCGGCCTCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: LSRKPGQLWKGAGPSPSTNALII*LGLWLI
Trigger: GATGAGCCAGAGGCCGAGCCATATGATGAGAGCGTT...TGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp CATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCCAGCGTGCGCTCCTTaGCCTCAACGCTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: HRSVGGASRGNQASCGRVPACAP*PQRSHH
Trigger: ATGATGAGAGCGTTGAGGCCAAGGAGCGCACGCTGG...CACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp CAGCTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACGCCAGGTGGCTTCGGTaGCTCTGGGGGCTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: QLFSFDTWWLSLPSLVAHARWLR*LWGLEA
Trigger: AGCTTCAAGCCCCCAGAGCCACCGAAGCCACCTGGC...GTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCCTGGGACAAGGAAAGAGGAGCTCTCAGGGGCTGCTaGGCAGCACCTCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: GPVSEVTGSAPSWDKERGALRGC*AAPHCS
Trigger: TGAGCAGTGAGGTGCTGCCCAGCAGCCCCTGAGAGC...TCCTCTTTCCTTGTCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp CAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTCTCAGGGGCTGCTaGGCAGCACCTCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: QKSVTIGVWEVPLEETRPALRGC*AAPHCS
Trigger: TGAGCAGTGAGGTGCTGCCCAGCAGCCCCTGAGAGC...TGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp GGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCCTGGGACAAGGAAAGAGGATCCCTTGGGTCGGCCTaGGACAGACAGGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: GPVSEVTGSAPSWDKERGSLGSA*DRQGNS
Trigger: GGAGTTCCCCTGTCTGTCCCAGGCCGACCCAAGGGA...TCCTCTTTCCTTGTCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp TGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGCTGACACTCCCTTaGGTCGGCCTGGGACAGACA +
Preference number: 4 (lower is better)
Translates to: CDHRSVGGASRGNQASCGRLTLP*VGLGQT
Trigger: TGTCTGTCCCAGGCCGACCCAAGGGAGTGTCAGCCT...TCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp AGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTTATGGCTGCTGGCCTTaGGCGCCCACAGATTCACAC +
Preference number: 4 (lower is better)
Translates to: RRGVLGQKSVTIGVWEVPYGCWP*APTDSH
Trigger: GTGTGAATCTGTGGGCGCCCAAGGCCAGCAGCCATA...AGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGCCAGATATGGCTGCTaGCCTTGGGCGCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: VTIGVWEVPLEETRPAVEARYGC*PWAPTD
Trigger: ATCTGTGGGCGCCCAAGGCCAGCAGCCATATCTGGC...TTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp TCCTTCCACTCCTCCAGCGTGCGCTCCTTGGCCTCAACGCTCTCATCATATGGCCGTCCAGAAGCCCGATaGCGTTCTCGTGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SFHSSSVRSLASTLSSYGRPEAR*RSRASG
Trigger: ACCTGAAGCACGAGAACGTCATCGGGCTTCTGGACG...GCCATATGATGAGAGCGTTGAGGCCAAGGAGCGCACGCTGGAGGAGTGGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR TCA 90 bp CCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCTCAGCGCCTGGCACTTaGCGATGTTGTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PEVCDHRSVGGASRGNQASAPGT*RCCSGR
Trigger: CCGACCTGAACAACATCGTCAAGTGCCAGGCGCTGA...GGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR TCA 90 bp AGCGTGCGCTCCTTGGCCTCAACGCTCTCATCATATGGCTCGGCCTCTGGCTCATGCCCACCACTTCCATaGTGCGCTTCAGCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: SVRSLASTLSSYGSASGSCPPLP*CASAGQ
Trigger: TTGACCAGCTGAAGCGCATCATGGAAGTGGTGGGCA...TGAGCCAGAGGCCGAGCCATATGATGAGAGCGTTGAGGCCAAGGAGCGCACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR TCA 90 bp AACTCAGCTCTGGGCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCATGTGCCTCAGCTGCACTaGCCCTCTGGTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: NSALGRVPSPRLLDQLHHVPQLH*PSGHCP
Trigger: TGGACAGTGACCAGAGGGTCAGTGCAGCTGAGGCAC...ATGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395764.5
CDS-3UTR TCA 90 bp CATCTAGGACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGAGTGCCTCAGCTGCACTaGCCCTCTGGTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: HLGPHSQVPVESAVARRGVPQLH*PSGHCP
Trigger: TGGACAGTGACCAGAGGGTCAGTGCAGCTGAGGCAC...TCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGGGGTCCTAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp GGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAGGAGAGGGAAGATGTGCCCTGACATATaGACACGGGGAGTGCACGCT +
Preference number: 4 (lower is better)
Translates to: GAASLKHPSRHQEPRRGKMCPDI*TRGVHA
Trigger: AGCGTGCACTCCCCGTGTTCATATGTCAGGGCACAT...CTTCCCTCTCCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp GTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAACTCCACGGAAGATGCTaGTCAGGTCCTTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VTIGVWEVPLEETRPAVELHGRC*SGPSGA
Trigger: TGCCCCAGAAGGACCTGAGCAGCATCTTCCGTGGAG...TTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR GCA 90 bp GTCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCTGGCTCCACGGAAGATaGTGCTCAGGTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VPHPRRKPLPMLMWLPFGWLHGR*CSGPSG
Trigger: CCCAGAAGGACCTGAGCAGCATCTTCCGTGGAGCCA...GCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp ACATGTGCCCTGACATATGAACACGGGGAGTGCACGCTCATCCACACGTGCCCAGCTCAATCTCCAGGCTaGCAGGTGGCTTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TCALTYEHGECTLIHTCPAQSPG*QVASVA
Trigger: AGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAGC...TGGGCACGTGTGGATGAGCGTGCACTCCCCGTGTTCATATGTCAGGGCACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp AAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTCTTGCCAGATATGGCTaGTGGCCTTGGGCGCCCACA +
Preference number: 4 (lower is better)
Translates to: KSVTIGVWEVPLEETRPALARYG*WPWAPT
Trigger: TGTGGGCGCCCAAGGCCAGCAGCCATATCTGGCAAG...AGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CCTCTTAGACCTGTGGGTCTCAGCAGTGACCAAGACAGCCCCCTACCTCCAGGCGAACCCCCTTTATTGTaGACCCCTGGTGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: PLRPVGLSSDQDSPLPPGEPPLL*TPGAGT
Trigger: AGTGCCTGCACCAGGGGTGCACAATAAAGGGGGTTC...GCCTGGAGGTAGGGGGCTGTCTTGGTCACTGCTGAGACCCACAGGTCTAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330651.11
CDS-3UTR CCA 90 bp ACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTCGTCGCTCAGCGCCTaGCACTTGACGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TIGVWEVPLEETRPAVEGSSLSA*HLTMLF
Trigger: GAACAACATCGTCAAGTGCCAGGCGCTGAGCGACGA...CCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp CAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCCTACACATGGCTCGTCGCTCAGCGCCTaGCACTTGACGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: QEDQGRPRDTCAQTPTHGSSLSA*HLTMLF
Trigger: GAACAACATCGTCAAGTGCCAGGCGCTGAGCGACGA...GCCATGTGTAGGAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp AACTCAGCTCTGGGCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCATATGATCCCGGCCGAGTaGATGTACTTCAGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: NSALGRVPSPRLLDQLHHMIPAE*MYFSPR
Trigger: GCGCGGGCTGAAGTACATCCACTCGGCCGGGATCAT...ATGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395764.5
CDS-3UTR CCA 90 bp GTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAAAGAGGGCCTTGCCCTaGAGCAGCTCAGCCATGATG +
Preference number: 4 (lower is better)
Translates to: VTIGVWEVPLEETRPAVEKRALP*SSSAMM
Trigger: CATCATGGCTGAGCTGCTCCAGGGCAAGGCCCTCTT...TTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp TGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGACCAGCGTGCGCTCCTTaGCCTCAACGCTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: CDHRSVGGASRGNQASCGPACAP*PQRSHH
Trigger: ATGATGAGAGCGTTGAGGCCAAGGAGCGCACGCTGG...TCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp CAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCATGGCTTCGGTGGCTCTaGGGGCTTGAAGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: QKSVTIGVWEVPLEETRPWLRWL*GLEAED
Trigger: GTCCTCAGCTTCAAGCCCCCAGAGCCACCGAAGCCA...TGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp CAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAAAACCAGGCCAGCTGTaGAAGGGTGCAGGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: QKSVTIGVWEVPLEETRPKPGQL*KGAGPS
Trigger: GCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTT...TGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp CTCAGCTCTGGGCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCATGCGTGACCATAGGAGTGTaGGAGGTGCCTCTCGAGGAA +
Preference number: 4 (lower is better)
Translates to: LSSGQGPVSEVTGSAPSCVTIGV*EVPLEE
Trigger: TTCCTCGAGAGGCACCTCCCACACTCCTATGGTCAC...GCATGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395764.5
CDS-3UTR CCA 90 bp AAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGCCAGATATGGCTGCTaGCCTTGGGCGCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: KSVTIGVWEVPLEETRPAARYGC*PWAPTD
Trigger: ATCTGTGGGCGCCCAAGGCCAGCAGCCATATCTGGC...AGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGATGCCCTTTGGCCCACTaGAGCCGCCAGTCTGAAACA +
Preference number: 4 (lower is better)
Translates to: GPRPEVCDHRSVGGASRGCPLAH*SRQSET
Trigger: TGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCA...TCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAGGAGAGGGAAGCGTCTCCGAGGTTACTaGATCAGCTCCATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GAASLKHPSRHQEPRRGKRLRGY*ISSILG
Trigger: TCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACG...CTTCCCTCTCCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp CTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACTGGCGTCCAGAAGCCCGATaGCGTTCTCGTGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LFSFDTWWLSLPSLVAHWRPEAR*RSRASG
Trigger: ACCTGAAGCACGAGAACGTCATCGGGCTTCTGGACG...CCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp GACAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCCTACACATGCCAAGTACACTTCGCTaGAGTCCTCGATGGACGTGG +
Preference number: 4 (lower is better)
Translates to: DRRTKVGPGTLVPRLLHMPSTLR*SPRWTW
Trigger: CCACGTCCATCGAGGACTTCAGCGAAGTGTACTTGG...CATGTGTAGGAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp GGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGATGCCCACCACTTCCATaGTGCGCTTCAGCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GPRPEVCDHRSVGGASRGCPPLP*CASAGQ
Trigger: TTGACCAGCTGAAGCGCATCATGGAAGTGGTGGGCA...TCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR TCA 90 bp AAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTGTCCGGGCGTGTTCTaGGGAGATTTTTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: KARGPRPEVCDHRSVGGACPGVF*GDFCQN
Trigger: GTTCTGGCAAAAATCTCCTCAGAACACGCCCGGACA...GGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR TCA 90 bp CCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCACAAGGAAAGAGGACTaGCCCACAGACCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: PEVCDHRSVGGASRGNQATRKED*PTDQST
Trigger: GGTGCTCTGGTCTGTGGGTCAGTCCTCTTTCCTTGT...GGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CTGCTGTGGGTCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGGGTCCCAGTGGAGAGTaGAGTAGCCAGAAGAGGACA +
Preference number: 4 (lower is better)
Translates to: LLWVPHPRRKPLPMLMWLGPSGE*SSQKRT
Trigger: TGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACC...CAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGACCCACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGACAGGAGGACCATATGAACACGGGGAGTaGACGCTCATCCACACGTGC +
Preference number: 4 (lower is better)
Translates to: PQSGPSGECSSQKRTGGPYEHGE*TLIHTC
Trigger: GCACGTGTGGATGAGCGTGCACTCCCCGTGTTCATA...TGGTCCTCCTGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CAGCTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACCCATGCTCATGTGGTTaGCCTTTGGCCCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: QLFSFDTWWLSLPSLVAHPCSCG*PLAHWS
Trigger: GCTCCAGTGGGCCAAAGGGCAACCACATGAGCATGG...GTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp GGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAGAAAGCCCCTGCCCATaGTCATGTGGTTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GPRPEVCDHRSVGGASRGESPCP*SCGCPL
Trigger: CAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTC...TCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCGAACCCCCTTTATTGTaGACCCCTGGTGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: PEVCDHRSVGGASRGNQAEPPLL*TPGAGT
Trigger: AGTGCCTGCACCAGGGGTGCACAATAAAGGGGGTTC...GGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000395764.5
CDS-3UTR CCA 90 bp CTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACTGGAAGAGGGCCTTGCCCTaGAGCAGCTCAGCCATGATG +
Preference number: 4 (lower is better)
Translates to: LFSFDTWWLSLPSLVAHWKRALP*SSSAMM
Trigger: CATCATGGCTGAGCTGCTCCAGGGCAAGGCCCTCTT...CCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp AACTCAGCTCTGGGCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCATTTCCAAGGAGGTCTATaGCCAGGGGGTTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: NSALGRVPSPRLLDQLHHFQGGL*PGGWLH
Trigger: GTGGAGCCAACCCCCTGGCCATAGACCTCCTTGGAA...ATGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGCCCAGAGCTGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395764.5
CDS-3UTR CCA 90 bp CCTCTTAGACCTGTGGGTCTCAGCAGTGACCAAGACAGCCCCCTACCTCCAGGCAACGCTCTCATCATATaGCTCGGCCTCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: PLRPVGLSSDQDSPLPPGNALII*LGLWLI
Trigger: GATGAGCCAGAGGCCGAGCCATATGATGAGAGCGTT...GCCTGGAGGTAGGGGGCTGTCTTGGTCACTGCTGAGACCCACAGGTCTAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp CAGCTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACCCAGCGTGCGCTCCTTaGCCTCAACGCTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: QLFSFDTWWLSLPSLVAHPACAP*PQRSHH
Trigger: ATGATGAGAGCGTTGAGGCCAAGGAGCGCACGCTGG...GTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCATGCGTGTAGATTCTTGGCTTCGGTGGCTCTaGGGGCTTGAAGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: AGSRLRGYWISSIMRVDSWLRWL*GLEAED
Trigger: GTCCTCAGCTTCAAGCCCCCAGAGCCACCGAAGCCA...AGAATCTACACGCATGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395764.5
CDS-3UTR CCA 90 bp GTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGTGACCATAGGAGTGTaGGAGGTGCCTCTCGAGGAA +
Preference number: 4 (lower is better)
Translates to: VTIGVWEVPLEETRPAVEVTIGV*EVPLEE
Trigger: TTCCTCGAGAGGCACCTCCCACACTCCTATGGTCAC...TTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CCA 90 bp CATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGTTCTCATTTGACACCTaGTGGTTGTCCCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HRSVGGASRGNQASCGRVFSFDT*WLSLPS
Trigger: GCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAA...CACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp CATCTAGGACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGACTGCCCATGCTCATGTaGTTGCCCTTTGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: HLGPHSQVPVESAVARRGLPMLM*LPFGPL
Trigger: CAGTGGGCCAAAGGGCAACCACATGAGCATGGGCAG...TCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGGGGTCCTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp GTCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCTGTCCGGGCGTGTTCTaGGGAGATTTTTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: VPHPRRKPLPMLMWLPFGCPGVF*GDFCQN
Trigger: GTTCTGGCAAAAATCTCCTCAGAACACGCCCGGACA...GCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp AGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTACATCACATGTGCCCTaGCATATGAACACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: RRGVLGQKSVTIGVWEVPTSHVP*HMNTGS
Trigger: ACTCCCCGTGTTCATATGTCAGGGCACATGTGATGT...AGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp AAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGAAAGCCCCTGCCCATaGTCATGTGGTTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KSVTIGVWEVPLEETRPAESPCP*SCGCPL
Trigger: CAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTC...AGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp CATCTAGGACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGAGTGACCATAGGAGTGTaGGAGGTGCCTCTCGAGGAA +
Preference number: 4 (lower is better)
Translates to: HLGPHSQVPVESAVARRGVTIGV*EVPLEE
Trigger: TTCCTCGAGAGGCACCTCCCACACTCCTATGGTCAC...TCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGGGGTCCTAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp CCAAGGAGGTCTATGGCCAGGGGGTTGGCTCCACGGAAGATGCTGCTCAGGTCCCCAGACTCCTACACATaGCAAGCACATGTACACACA +
Preference number: 4 (lower is better)
Translates to: PRRSMARGLAPRKMLLRSPDSYT*QAHVHT
Trigger: TGTGTGTACATGTGCTTGCCATGTGTAGGAGTCTGG...GGACCTGAGCAGCATCTTCCGTGGAGCCAACCCCCTGGCCATAGACCTCCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR CCA 90 bp GGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGTTCTCATTTGACACCTaGTGGTTGTCCCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GQKSVTIGVWEVPLEETRFSFDT*WLSLPS
Trigger: GCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAA...CCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp TGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGACGTCTCCGAGGTTACTaGATCAGCTCCATCATGCGT +
Preference number: 4 (lower is better)
Translates to: CDHRSVGGASRGNQASCGRLRGY*ISSIMR
Trigger: ACGCATGATGGAGCTGATCCAGTAACCTCGGAGACG...TCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395764.5
3UTR CAA 72 bp ACGGGTGAACACAAGACTCCAGGCAGCTTTTCTCATTaGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TGEHKTPGSFSH*TPGGCPCPAWW
Trigger: CCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAGCTGCCTGGAGTCTTGTGTTCACCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp GGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCATGCGTGTAGATTCTCCTCCAAGTACACTTCGCTaGAGTCCTCGATGGACGTGG +
Preference number: 4 (lower is better)
Translates to: GSRLRGYWISSIMRVDSPPSTLR*SPRWTW
Trigger: CCACGTCCATCGAGGACTTCAGCGAAGTGTACTTGG...AGGAGAATCTACACGCATGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395764.5
CDS-3UTR TCA 90 bp GAACCCCTTTGGCATCTAGGACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTATGTCCGGGCGTGTTCTaGGGAGATTTTTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: EPLWHLGPHSQVPVESAVCPGVF*GDFCQN
Trigger: GTTCTGGCAAAAATCTCCTCAGAACACGCCCGGACA...TACTGCACTCTCCACTGGGACCTGACTGTGGGGTCCTAGATGCCAAAGGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp TCCCACATCCAAGGAGAAAGCCCCTGCCCATGCTCATGTGGTTGCCCTTTGGCCGCAGCTTTTCTCATTTaGCACCTGGTGGTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: SHIQGESPCPCSCGCPLAAAFLI*HLVVVP
Trigger: AGGGACAACCACCAGGTGTCAAATGAGAAAAGCTGC...GGCCAAAGGGCAACCACATGAGCATGGGCAGGGGCTTTCTCCTTGGATGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCCTGGGACAAGGAAAGAGGACTCCTCTTAGACCTGTaGGTCTCAGCAGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: GPVSEVTGSAPSWDKERGLLLDL*VSAVTK
Trigger: CTTGGTCACTGCTGAGACCCACAGGTCTAAGAGGAG...TCCTCTTTCCTTGTCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR TCA 90 bp ACATGTGCCCTGACATATGAACACGGGGAGTGCACGCTCATCCACACGTGCCCAACATCACATGTGCCCTaGCATATGAACACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: TCALTYEHGECTLIHTCPTSHVP*HMNTGS
Trigger: ACTCCCCGTGTTCATATGTCAGGGCACATGTGATGT...TGGGCACGTGTGGATGAGCGTGCACTCCCCGTGTTCATATGTCAGGGCACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CCA 90 bp GGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCATGCGTGTAGATTCTCCTAACGCTCTCATCATATaGCTCGGCCTCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: GSRLRGYWISSIMRVDSPNALII*LGLWLI
Trigger: GATGAGCCAGAGGCCGAGCCATATGATGAGAGCGTT...AGGAGAATCTACACGCATGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395764.5
CDS-3UTR CCA 90 bp GGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGACCAGACTCCTACACATaGCAAGCACATGTACACACA +
Preference number: 4 (lower is better)
Translates to: GPRPEVCDHRSVGGASRGPDSYT*QAHVHT
Trigger: TGTGTGTACATGTGCTTGCCATGTGTAGGAGTCTGG...TCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp GGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAACACATGTTTGTGCATaGATACATGCGTGTAGATTC +
Preference number: 4 (lower is better)
Translates to: GPRPEVCDHRSVGGASRGTHVCA*IHACRF
Trigger: GAATCTACACGCATGTATGCATGCACAAACATGTGT...TCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR GCA 90 bp CTTTTCTCATTTGACACCTGGTGGTTGTCCCTGCCCAGCCTGGTGGCACACTGGACACATGTTTGTGCATaGATACATGCGTGTAGATTC +
Preference number: 4 (lower is better)
Translates to: LFSFDTWWLSLPSLVAHWTHVCA*IHACRF
Trigger: GAATCTACACGCATGTATGCATGCACAAACATGTGT...CCAGTGTGCCACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAATGAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS GCA 90 bp GGCGTCGTAGGCCGAACTCTTGGGGGCCGCGCGCTTCTCCAGACTTaGGCCCGCGTCTGGGCTCGGCCCGGGCTTCCCTACCCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: GVVGRTLGGRALLQT*ARVWARPGLPYPGG
Trigger: GCCGCCGGGGTAGGGAAGCCCGGGCCGAGCCCAGACGCGGGCGCAAGTCTGGAGAAGCGCGCGGCCCCCAAGAGTTCGGCCTACGACGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495277.1
CDS CCA 90 bp GGGCTTCAGGTCCTGCAGGTCACGCGGAGCGTGAGCACAGGAGGCTaGGACGGAGCCCTGCTGGACCCGACCCTCACCCTGCGGTCGCAC +
Preference number: 5 (lower is better)
Translates to: GLQVLQVTRSVSTGG*DGALLDPTLTLRSH
Trigger: GTGCGACCGCAGGGTGAGGGTCGGGTCCAGCAGGGCTCCGTCCCAGCCTCCTGTGCTCACGCTCCGCGTGACCTGCAGGACCTGAAGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495277.1
CDS-3UTR CAA 90 bp TGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCACCCGGGAAGAGGGCCTaGCCCTGGAGCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: CGRCLSRKPGQLWKGAGPPGKRA*PWSSSA
Trigger: GGCTGAGCTGCTCCAGGGCAAGGCCCTCTTCCCGGG...TGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp TGTGGTTGCCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCACCCGGGAAGAGGGCCTaGCCCTGGAGCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: CGCPLAHWSRQSETPLKAPGKRA*PWSSSA
Trigger: GGCTGAGCTGCTCCAGGGCAAGGCCCTCTTCCCGGG...TGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCAACCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp AAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCCCCGGGAAGAGGGCCTaGCCCTGGAGCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: KARGPRPEVCDHRSVGGAPGKRA*PWSSSA
Trigger: GGCTGAGCTGCTCCAGGGCAAGGCCCTCTTCCCGGG...GGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp CTGGGCAGCACCTCACTGCTCAATCTCCAGGCTGCCAGGTGGCTTCGGTGGCTCCTGAGACCTCTCCCTTaGAGTCTCCCGGGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: LGSTSLLNLQAARWLRWLLRPLP*SLPGSR
Trigger: CCGGGACCCCGGGAGACTCAAAGGGAGAGGTCTCAG...GAGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAGCAGTGAGGTGCTGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR CAA 90 bp AGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTCCCTGGTGCAGGCACTaGACACCCAGGCTTCCCTGG +
Preference number: 5 (lower is better)
Translates to: RKPGQLWKGAGPSPSTGSPWCRH*TPRLPW
Trigger: CCAGGGAAGCCTGGGTGTCAAGTGCCTGCACCAGGG...AGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp GGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCTGGTGCAGGCACTaGACACCCAGGCTTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GVWEVPLEETRPAVEGCRPWCRH*TPRLPW
Trigger: CCAGGGAAGCCTGGGTGTCAAGTGCCTGCACCAGGG...CCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp GAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCTCTATGGCCAGGGGGTaGGCTCCACGGAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: EVPLEETRPAVEGCRPKPSMARG*APRKML
Trigger: CAGCATCTTCCGTGGAGCCAACCCCCTGGCCATAGA...GGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp GGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTCTCCAGCGTGCGCTCCTaGGCCTCAACGCTCTCATCA +
Preference number: 5 (lower is better)
Translates to: GNQASCGRVQAQAPPQALSSVRS*ASTLSS
Trigger: TGATGAGAGCGTTGAGGCCAAGGAGCGCACGCTGGA...GAGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp GCACACCCACCCCGGCTCCAGCTTCTTGCCAGATATGGCTGCTGGCCTTGGGCGTGGCACTTGACGATGTaGTTCAGGTCGGCGCCCATC +
Preference number: 5 (lower is better)
Translates to: AHPPRLQLLARYGCWPWAWHLTM*FRSAPI
Trigger: GATGGGCGCCGACCTGAACAACATCGTCAAGTGCCA...CGCCCAAGGCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGGGTGGGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp GGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTCATATGGCTGCTGGCCTaGGGCGCCCACAGATTCACA +
Preference number: 5 (lower is better)
Translates to: GNQASCGRVQAQAPPQALIWLLA*GAHRFT
Trigger: TGTGAATCTGTGGGCGCCCAAGGCCAGCAGCCATAT...GAGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp GGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAACCGAGGAGAGGGAAGCCCTGGTGCAGGCACTaGACACCCAGGCTTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GAASLKHPSRHQEPRRGKPWCRH*TPRLPW
Trigger: CCAGGGAAGCCTGGGTGTCAAGTGCCTGCACCAGGG...CTTCCCTCTCCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp TGCCCTAGCGTCCTCAAGGCCAAACCACCCACCCACCCACCCCCAGCCTCAGGAAGAGAACCCCCTTTATaGTGCACCCCTGGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: CPSVLKAKPPTHPPPASGREPPL*CTPGAG
Trigger: GCCTGCACCAGGGGTGCACAATAAAGGGGGTTCTCT...TCCTGAGGCTGGGGGTGGGTGGGTGGGTGGTTTGGCCTTGAGGACGCTAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330651.11
CDS-3UTR CAA 90 bp GGCAGCACCTCACTGCTCAATCTCCAGGCTGCCAGGTGGCTTCGGTGGCTCTGGTGGCACTTGACGATGTaGTTCAGGTCGGCGCCCATC +
Preference number: 5 (lower is better)
Translates to: GSTSLLNLQAARWLRWLWWHLTM*FRSAPI
Trigger: GATGGGCGCCGACCTGAACAACATCGTCAAGTGCCA...CCAGAGCCACCGAAGCCACCTGGCAGCCTGGAGATTGAGCAGTGAGGTGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR CAA 90 bp TGCCCAGCCTGGTGGCACACTGGCTCTGCCTCTCCTCTTAGACCTGTGGGTCTCTCCAGCGTGCGCTCCTaGGCCTCAACGCTCTCATCA +
Preference number: 5 (lower is better)
Translates to: CPAWWHTGSASPLRPVGLSSVRS*ASTLSS
Trigger: TGATGAGAGCGTTGAGGCCAAGGAGCGCACGCTGGA...GAGACCCACAGGTCTAAGAGGAGAGGCAGAGCCAGTGTGCCACCAGGCTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp GCCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGAAGGTGGCTCTGGGGGCTaGAAGCTGAGGACTTCCTGG +
Preference number: 5 (lower is better)
Translates to: ALWPTGAASLKHPSRHQEGGSGG*KLRTSW
Trigger: CCAGGAAGTCCTCAGCTTCAAGCCCCCAGAGCCACC...TTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp AGCGTGCGCTCCTTGGCCTCAACGCTCTCATCATATGGCTCGGCCTCTGGCTCAAAGGCTGACACTCCCTaGGGTCGGCCTGGGACAGAC +
Preference number: 5 (lower is better)
Translates to: SVRSLASTLSSYGSASGSKADTP*GRPGTD
Trigger: GTCTGTCCCAGGCCGACCCAAGGGAGTGTCAGCCTT...TGAGCCAGAGGCCGAGCCATATGATGAGAGCGTTGAGGCCAAGGAGCGCACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR CAA 90 bp ACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGACAGGAGGACTGAGACCTCTCCCTTaGAGTCTCCCGGGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: TPQSGPSGECSSQKRTGGLRPLP*SLPGSR
Trigger: CCGGGACCCCGGGAGACTCAAAGGGAGAGGTCTCAG...TCCTCCTGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp AAGGCGAGGGGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTATGGCCAGGGGGTaGGCTCCACGGAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: KARGPRPEVCDHRSVGGASMARG*APRKML
Trigger: CAGCATCTTCCGTGGAGCCAACCCCCTGGCCATAGA...GGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACCCCTCGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp CTGGGACAAGGAAAGAGGACTGACCCACAGACCAGAGCACCTCAGATCTCCGGCGGTGGCTCTGGGGGCTaGAAGCTGAGGACTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LGQGKRTDPQTRAPQISGGGSGG*KLRTSW
Trigger: CCAGGAAGTCCTCAGCTTCAAGCCCCCAGAGCCACC...GCCGGAGATCTGAGGTGCTCTGGTCTGTGGGTCAGTCCTCTTTCCTTGTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp GGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAAGGCTGACACTCCCTaGGGTCGGCCTGGGACAGAC +
Preference number: 5 (lower is better)
Translates to: GPRPEVCDHRSVGGASRGKADTP*GRPGTD
Trigger: GTCTGTCCCAGGCCGACCCAAGGGAGTGTCAGCCTT...TCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp GTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAACCCGGCTCCAGCTTCTaGCCAGATATGGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: VTIGVWEVPLEETRPAVEPGSSF*PDMAAG
Trigger: GCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGG...TTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp GGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGTCATGTGGTTGCCCTTaGGCCCACTGGAGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: GQKSVTIGVWEVPLEETRSCGCP*AHWSRQ
Trigger: CTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATGA...CCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp ACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGACAGGAGGATCATGTGGTTGCCCTTaGGCCCACTGGAGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: TPQSGPSGECSSQKRTGGSCGCP*AHWSRQ
Trigger: CTGGCGGCTCCAGTGGGCCAAAGGGCAACCACATGA...TCCTCCTGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp CATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGTGGCACTTGACGATGTaGTTCAGGTCGGCGCCCATC +
Preference number: 5 (lower is better)
Translates to: HRSVGGASRGNQASCGRVWHLTM*FRSAPI
Trigger: GATGGGCGCCGACCTGAACAACATCGTCAAGTGCCA...CACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp GACAGGAGGACCAAGGTAGGCCCAGGGACACTTGTGCCCAGACTCCTACACATGTTTGACACCTGGTGGTaGTCCCTGCCCAGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: DRRTKVGPGTLVPRLLHMFDTWW*SLPSLV
Trigger: CACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAA...CATGTGTAGGAGTCTGGGCACAAGTGTCCCTGGGCCTACCTTGGTCCTCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp AGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCCAAGCCCCTCCACAGGCTCTGGCAGCTTTTCTCATTaGACACCTGGTGGTTGTCCC +
Preference number: 5 (lower is better)
Translates to: RKPGQLWKGAGPSPSTGSGSFSH*TPGGCP
Trigger: GGGACAACCACCAGGTGTCAAATGAGAAAAGCTGCC...AGAGCCTGTGGAGGGGCTTGGGCCTGCACCCTTCCACAGCTGGCCTGGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp GGGCTTGAAGCTGAGGACTTCCTGGTAAGTGAGCTCCTTCCACTCCTCCAGCGTCCCGGCTCCAGCTTCTaGCCAGATATGGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: GLEAEDFLVSELLPLLQRPGSSF*PDMAAG
Trigger: GCCAGCAGCCATATCTGGCAAGAAGCTGGAGCCGGG...ACGCTGGAGGAGTGGAAGGAGCTCACTTACCAGGAAGTCCTCAGCTTCAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417877.1
CDS-3UTR CAA 90 bp CCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCCTCAGCGCCTGGCACTaGACGATGTTGTTCAGGTCG +
Preference number: 5 (lower is better)
Translates to: PEVCDHRSVGGASRGNQALSAWH*TMLFRS
Trigger: CGACCTGAACAACATCGTCAAGTGCCAGGCGCTGAG...GGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp GGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCCTGGGACAAGGAAAGAGGATCTATGGCCAGGGGGTaGGCTCCACGGAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: GPVSEVTGSAPSWDKERGSMARG*APRKML
Trigger: CAGCATCTTCCGTGGAGCCAACCCCCTGGCCATAGA...TCCTCTTTCCTTGTCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp CAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCATCCAGCGTGCGCTCCTaGGCCTCAACGCTCTCATCA +
Preference number: 5 (lower is better)
Translates to: QKSVTIGVWEVPLEETRPSSVRS*ASTLSS
Trigger: TGATGAGAGCGTTGAGGCCAAGGAGCGCACGCTGGA...TGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp GCAGGGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCATGCGTGTAGATTCTGGTGGCTCTGGGGGCTaGAAGCTGAGGACTTCCTGG +
Preference number: 5 (lower is better)
Translates to: AGSRLRGYWISSIMRVDSGGSGG*KLRTSW
Trigger: CCAGGAAGTCCTCAGCTTCAAGCCCCCAGAGCCACC...AGAATCTACACGCATGATGGAGCTGATCCAGTAACCTCGGAGACGGGACCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395764.5
CDS-3UTR CAA 90 bp CATCTAGGACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGATTTGACACCTGGTGGTaGTCCCTGCCCAGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: HLGPHSQVPVESAVARRGFDTWW*SLPSLV
Trigger: CACCAGGCTGGGCAGGGACAACCACCAGGTGTCAAA...TCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGGGGTCCTAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp ACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGACAGGAGGAATATGGCTGCTGGCCTaGGGCGCCCACAGATTCACA +
Preference number: 5 (lower is better)
Translates to: TPQSGPSGECSSQKRTGGIWLLA*GAHRFT
Trigger: TGTGAATCTGTGGGCGCCCAAGGCCAGCAGCCATAT...TCCTCCTGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp CATCTAGGACCCCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGACCCATGCTCATGTGGTaGCCCTTTGGCCCACTGGAG +
Preference number: 5 (lower is better)
Translates to: HLGPHSQVPVESAVARRGPMLMW*PFGPLE
Trigger: CTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGG...TCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGGGGTCCTAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp AAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTCCCATGCTCATGTGGTaGCCCTTTGGCCCACTGGAG +
Preference number: 5 (lower is better)
Translates to: KSVTIGVWEVPLEETRPAPMLMW*PFGPLE
Trigger: CTCCAGTGGGCCAAAGGGCAACCACATGAGCATGGG...AGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp GGTCCTAGGCCAGAAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAGAGAACCCCCTTTATaGTGCACCCCTGGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: GPRPEVCDHRSVGGASRGREPPL*CTPGAG
Trigger: GCCTGCACCAGGGGTGCACAATAAAGGGGGTTCTCT...TCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTTCTGGCCTAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000395764.5
CDS-3UTR CAA 90 bp AAGTCTGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTCTCAGCGCCTGGCACTaGACGATGTTGTTCAGGTCG +
Preference number: 5 (lower is better)
Translates to: KSVTIGVWEVPLEETRPALSAWH*TMLFRS
Trigger: CGACCTGAACAACATCGTCAAGTGCCAGGCGCTGAG...AGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp TGCCCTTTGGCCCACTGGAGCCGCCAGTCTGAAACACCCCTCAAGGCATCAGGACTGGTAAACCAGGAATaGAACGTGCTCGTCGCTCAG +
Preference number: 5 (lower is better)
Translates to: CPLAHWSRQSETPLKASGLVNQE*NVLVAQ
Trigger: CTGAGCGACGAGCACGTTCAATTCCTGGTTTACCAG...TCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCAGTGGGCCAAAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp ACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGGTTCTGAGGAGATTTTaGCCAGAACCTCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TIGVWEVPLEETRPAVEGVLRRF*PEPQGW
Trigger: CCAGCCCTGAGGTTCTGGCAAAAATCTCCTCAGAAC...CCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp CATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGGTTCTGAGGAGATTTTaGCCAGAACCTCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: HRSVGGASRGNQASCGRVVLRRF*PEPQGW
Trigger: CCAGCCCTGAGGTTCTGGCAAAAATCTCCTCAGAAC...CACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp TGTGACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGACTGGTAAACCAGGAATaGAACGTGCTCGTCGCTCAG +
Preference number: 5 (lower is better)
Translates to: CDHRSVGGASRGNQASCGLVNQE*NVLVAQ
Trigger: CTGAGCGACGAGCACGTTCAATTCCTGGTTTACCAG...TCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp CCACAGTCAGGTCCCAGTGGAGAGTGCAGTAGCCAGAAGAGGACAGGAGGACCAGGCAGCTTTTCTCATTaGACACCTGGTGGTTGTCCC +
Preference number: 5 (lower is better)
Translates to: PQSGPSGECSSQKRTGGPGSFSH*TPGGCP
Trigger: GGGACAACCACCAGGTGTCAAATGAGAAAAGCTGCC...TGGTCCTCCTGTCCTCTTCTGGCTACTGCACTCTCCACTGGGACCTGACTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp GGTCCCGTCTCCGAGGTTACTGGATCAGCTCCATCCTGGGACAAGGAAAGAGGACTGGTAAACCAGGAATaGAACGTGCTCGTCGCTCAG +
Preference number: 5 (lower is better)
Translates to: GPVSEVTGSAPSWDKERGLVNQE*NVLVAQ
Trigger: CTGAGCGACGAGCACGTTCAATTCCTGGTTTACCAG...TCCTCTTTCCTTGTCCCAGGATGGAGCTGATCCAGTAACCTCGGAGACGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp GGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCAGGCCAGATATCCACTGTTaGGTTGTAATGCATCCAGTT +
Preference number: 5 (lower is better)
Translates to: GVWEVPLEETRPAVEGCRPDIHC*VVMHPV
Trigger: AACTGGATGCATTACAACCAAACAGTGGATATCTGG...CCTGCACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp ACATGTGCCCTGACATATGAACACGGGGAGTGCACGCTCATCCACACGTGCCCAGTTCTGAGGAGATTTTaGCCAGAACCTCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TCALTYEHGECTLIHTCPVLRRF*PEPQGW
Trigger: CCAGCCCTGAGGTTCTGGCAAAAATCTCCTCAGAAC...TGGGCACGTGTGGATGAGCGTGCACTCCCCGTGTTCATATGTCAGGGCACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330651.11
ENST00000417877.1
CDS-3UTR CAA 90 bp GACCATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGCCAGATATCCACTGTTaGGTTGTAATGCATCCAGTT +
Preference number: 5 (lower is better)
Translates to: DHRSVGGASRGNQASCGRPDIHC*VVMHPV
Trigger: AACTGGATGCATTACAACCAAACAGTGGATATCTGG...CCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS-3UTR CAA 90 bp CATAGGAGTGTGGGAGGTGCCTCTCGAGGAAACCAGGCCAGCTGTGGAAGGGTGCCAGATATCCACTGTTaGGTTGTAATGCATCCAGTT +
Preference number: 5 (lower is better)
Translates to: HRSVGGASRGNQASCGRVPDIHC*VVMHPV
Trigger: AACTGGATGCATTACAACCAAACAGTGGATATCTGG...CACCCTTCCACAGCTGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
CDS CAA 90 bp GGGCGTCGTAGGCCGAACTCTTGGGGGCCGCGCGCTTCTCCAGACTaGCGCCCGCGTCTGGGCTCGGCCCGGGCTTCCCTACCCCGGCGG +
Preference number: 6 (lower is better)
Translates to: GRRRPNSWGPRASPD*RPRLGSARASLPRR
Trigger: CCGCCGGGGTAGGGAAGCCCGGGCCGAGCCCAGACGCGGGCGCAAGTCTGGAGAAGCGCGCGGCCCCCAAGAGTTCGGCCTACGACGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495277.1
CDS GCA 72 bp GGCCGAACTCTTGGGGGCCGCGCGCTTCTCCAGACTTaGGCCCGCGTCTGGGCTCGGCCCGGGCTTCCCTAC +
Preference number: 6 (lower is better)
Translates to: GRTLGGRALLQT*ARVWARPGLPY
Trigger: GTAGGGAAGCCCGGGCCGAGCCCAGACGCGGGCGCAAGTCTGGAGAAGCGCGCGGCCCCCAAGAGTTCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495277.1
CDS GCA 72 bp GCTGGGACGGAGCCCTGCTGGACCCGACCCTCACCCTaGGGTCGCACCTACCCGGTGGATGATCCCGGCCGA +
Preference number: 6 (lower is better)
Translates to: AGTEPCWTRPSP*GRTYPVDDPGR
Trigger: TCGGCCGGGATCATCCACCGGGTAGGTGCGACCGCAGGGTGAGGGTCGGGTCCAGCAGGGCTCCGTCCCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495277.1
CDS CAA 72 bp AGGCCGAACTCTTGGGGGCCGCGCGCTTCTCCAGACTaGCGCCCGCGTCTGGGCTCGGCCCGGGCTTCCCTA +
Preference number: 6 (lower is better)
Translates to: RPNSWGPRASPD*RPRLGSARASL
Trigger: TAGGGAAGCCCGGGCCGAGCCCAGACGCGGGCGCAAGTCTGGAGAAGCGCGCGGCCCCCAAGAGTTCGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495277.1
CDS CCA 72 bp GTCCTGCAGGTCACGCGGAGCGTGAGCACAGGAGGCTaGGACGGAGCCCTGCTGGACCCGACCCTCACCCTG +
Preference number: 6 (lower is better)
Translates to: VLQVTRSVSTGG*DGALLDPTLTL
Trigger: CAGGGTGAGGGTCGGGTCCAGCAGGGCTCCGTCCCAGCCTCCTGTGCTCACGCTCCGCGTGACCTGCAGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495277.1
CDS CCA 72 bp AGCTCCCGGTACGTTCTGCGCGCGTGGATCAGCGACTaGAAGGGGCGCGACAGCTTCTTCACCGCCACCTTC +
Preference number: 6 (lower is better)
Translates to: SSRYVLRAWISD*KGRDSFFTATF
Trigger: GAAGGTGGCGGTGAAGAAGCTGTCGCGCCCCTTCCAGTCGCTGATCCACGCGCGCAGAACGTACCGGGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
ENST00000495277.1
CDS CAA 72 bp ACGTGCTCGTCGCTCAGCGCCTGGCACTTGACGATGTaGTTCAGGTCGGCGCCCATCAGGGTGGTCACCAAG +
Preference number: 6 (lower is better)
Translates to: TCSSLSAWHLTM*FRSAPIRVVTK
Trigger: CTTGGTGACCACCCTGATGGGCGCCGACCTGAACAACATCGTCAAGTGCCAGGCGCTGAGCGACGAGCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330651.11
ENST00000395764.5
ENST00000417877.1
ENST00000495277.1