RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAPK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100030

Ensembl transcript IDs: ENST00000215832.11, ENST00000398822.7, ENST00000491588.1, ENST00000544786.1

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTaGGTACTGTGGGGCGGCCCTTCCCAACTCTTGGCTGTGCCCAGC +
Preference number: 1 (lower is better)
Translates to: HRSGEREHPGLGGED*VLWGGPSQLLAVPS
Trigger: GCTGGGCACAGCCAAGAGTTGGGAAGGGCCGCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 90 bp GTGAGGACTGCGTACTGTGGGGCGGCCCTTCCCAACTCTTGGCTGTaGCCAGCAGCACCTCTGGGGCACAAGGGCAGGCCCTCTTTAGAG +
Preference number: 1 (lower is better)
Translates to: VRTAYCGAALPNSWL*PAAPLGHKGRPSLE
Trigger: CTCTAAAGAGGGCCTGCCCTTGTGCCCCAGAGGTGCTGCTGGGCACAGCCAAGAGTTGGGAAGGGCCGCCCCACAGTACGCAGTCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 90 bp TATCCTTCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTaGGTGGTGAGGACTGCGTACTGTGGGGCGGCCCTTCCCAACTCT +
Preference number: 1 (lower is better)
Translates to: YPSSATGVVSVSTLG*VVRTAYCGAALPNS
Trigger: AGAGTTGGGAAGGGCCGCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGAAGGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 90 bp TCTCACCACAGAGAGCAGTGGGGAAGTCAAGAGGAGGCACCGCACTaGGACAGAACACCGAGTCAACTCCACAGTACACAGTGGCAGGAA +
Preference number: 1 (lower is better)
Translates to: SHHREQWGSQEEAPH*DRTPSQLHSTQWQE
Trigger: TTCCTGCCACTGTGTACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCCCCACTGCTCTCTGTGGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 90 bp AAGTGCTCCCCAAGGATTCCGGAGACGGAAGCACTTGCTGCAGGCTaGAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGAA +
Preference number: 1 (lower is better)
Translates to: KCSPRIPETEALAAG*NISQGISTSSCSGE
Trigger: TTCCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAGCCTGCAGCAAGTGCTTCCGTCTCCGGAATCCTTGGGGAGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 90 bp AGACGTGGACAAGTGCTCCCCAAGGATTCCGGAGACGGAAGCACTTaGTGCAGGCTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTG +
Preference number: 1 (lower is better)
Translates to: RRGQVLPKDSGDGST*CRLQHQPRYFHKLL
Trigger: CAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAGCCTGCAGCAAGTGCTTCCGTCTCCGGAATCCTTGGGGAGCACTTGTCCACGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 90 bp CAACTACCAGAAACCGCCCCTCCAAACGGCTCAAAGGAGTCAAAGTaGATAAGCCAAGACGGGCTGGAGACAGGACCAGGGGTCAAGAAC +
Preference number: 1 (lower is better)
Translates to: QLPETAPPNGSKESK*ISQDGLETGPGVKN
Trigger: GTTCTTGACCCCTGGTCCTGTCTCCAGCCCGTCTTGGCTTATCCACTTTGACTCCTTTGAGCCGTTTGGAGGGGCGGTTTCTGGTAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 90 bp ACACCCACATTTGAAGTAGCTCAAGGGCGTATATGCACCAGCATGTaGAGTTCCACCCTGGGACATCCCCAGAAACCGCCCACAGCTCAG +
Preference number: 1 (lower is better)
Translates to: TPTFEVAQGRICTSM*SSTLGHPQKPPTAQ
Trigger: CTGAGCTGTGGGCGGTTTCTGGGGATGTCCCAGGGTGGAACTCCACATGCTGGTGCATATACGCCCTTGAGCTACTTCAAATGTGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 90 bp GCTGACAGTCTGAAGCAGAGGAAGAAAGCAGAGACGCAGAATGACTaGCCCACAGCCAGCCGCAGTTATAAGCAGGGGGTAGTTCTGAAC +
Preference number: 1 (lower is better)
Translates to: ADSLKQRKKAETQND*PTASRSYKQGVVLN
Trigger: GTTCAGAACTACCCCCTGCTTATAACTGCGGCTGGCTGTGGGCCAGTCATTCTGCGTCTCTGCTTTCTTCCTCTGCTTCAGACTGTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 90 bp CTGGTTACCTCTACACCCACTGCCTGTGCCCAAGAGCAGAAGGAATaGGTGTGCACACACCACACACTGTGCACTGCACACACAATACAG +
Preference number: 1 (lower is better)
Translates to: LVTSTPTACAQEQKE*VCTHHTLCTAHTIQ
Trigger: CTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATTCCTTCTGCTCTTGGGCACAGGCAGTGGGTGTAGAGGTAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 90 bp CCAGTGACTAGAGCCAATTGGGGAAGAATCTCTCTCTGGTGCGGCTaGATGGTCAGCAGGGCATCATGTAGAAAAGGATTCAGGAGAGGG +
Preference number: 1 (lower is better)
Translates to: PVTRANWGRISLWCG*MVSRASCRKGFRRG
Trigger: CCCTCTCCTGAATCCTTTTCTACATGATGCCCTGCTGACCATGCAGCCGCACCAGAGAGAGATTCTTCCCCAATTGGCTCTAGTCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 90 bp GTAAGCAGTAGGTGCACTGAAGTACATACTGCCGCAGGTCACCAATaGGTGACACACACAGGGCTGCCAGGAGGAATTCTCTGGACTGAA +
Preference number: 1 (lower is better)
Translates to: VSSRCTEVHTAAGHQ*VTHTGLPGGILWTE
Trigger: TTCAGTCCAGAGAATTCCTCCTGGCAGCCCTGTGTGTGTCACCCATTGGTGACCTGCGGCAGTATGTACTTCAGTGCACCTACTGCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 90 bp GAGATGCCAGTGACTAGAGCCAATTGGGGAAGAATCTCTCTCTGGTaGGGCTGCATGGTCAGCAGGGCATCATGTAGAAAAGGATTCAGG +
Preference number: 1 (lower is better)
Translates to: EMPVTRANWGRISLW*GCMVSRASCRKGFR
Trigger: CCTGAATCCTTTTCTACATGATGCCCTGCTGACCATGCAGCCGCACCAGAGAGAGATTCTTCCCCAATTGGCTCTAGTCACTGGCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 90 bp GTGGTTACTGAAACACCCACATTTGAAGTAGCTCAAGGGCGTATATaGACCAGCATGTGGAGTTCCACCCTGGGACATCCCCAGAAACCG +
Preference number: 1 (lower is better)
Translates to: VVTETPTFEVAQGRI*TSMWSSTLGHPQKP
Trigger: CGGTTTCTGGGGATGTCCCAGGGTGGAACTCCACATGCTGGTGCATATACGCCCTTGAGCTACTTCAAATGTGGGTGTTTCAGTAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 90 bp AGTGCCCTAGGTAGTAGCCTTCCCTATCATAAAGTGAGATGCCAGTaGCTAGAGCCAATTGGGGAAGAATCTCTCTCTGGTGCGGCTGCA +
Preference number: 1 (lower is better)
Translates to: SALGSSLPYHKVRCQ*LEPIGEESLSGAAA
Trigger: TGCAGCCGCACCAGAGAGAGATTCTTCCCCAATTGGCTCTAGTCACTGGCATCTCACTTTATGATAGGGAAGGCTACTACCTAGGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 90 bp AGTGAGATGCCAGTGACTAGAGCCAATTGGGGAAGAATCTCTCTCTaGTGCGGCTGCATGGTCAGCAGGGCATCATGTAGAAAAGGATTC +
Preference number: 1 (lower is better)
Translates to: SEMPVTRANWGRISL*CGCMVSRASCRKGF
Trigger: GAATCCTTTTCTACATGATGCCCTGCTGACCATGCAGCCGCACCAGAGAGAGATTCTTCCCCAATTGGCTCTAGTCACTGGCATCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 90 bp AGCACGCAAGTGAAAAGCGCGTATTTCAGGGCAAGAATAGAGATGTaGGTCTGTTTTCCGAGGATGAGCCAGCTATCCTTCCTCAGCCAC +
Preference number: 1 (lower is better)
Translates to: STQVKSAYFRARIEM*VCFPRMSQLSFLSH
Trigger: GTGGCTGAGGAAGGATAGCTGGCTCATCCTCGGAAAACAGACCCACATCTCTATTCTTGCCCTGAAATACGCGCTTTTCACTTGCGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 90 bp ATATATGTTAGTGACTACCATGATATGAGAAAAGACGTGGACAAGTaGTCCCCAAGGATTCCGGAGACGGAAGCACTTGCTGCAGGCTGC +
Preference number: 1 (lower is better)
Translates to: IYVSDYHDMRKDVDK*SPRIPETEALAAGC
Trigger: GCAGCCTGCAGCAAGTGCTTCCGTCTCCGGAATCCTTGGGGAGCACTTGTCCACGTCTTTTCTCATATCATGGTAGTCACTAACATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 90 bp CTGCACACACAATACAGTATTCTTCTACCCAGATGCCACAATGTCTaGGTATCTCTGCTAGCTTTGAGGACCTGTGTCAGGACAGAGTCC +
Preference number: 1 (lower is better)
Translates to: LHTQYSILLPRCHNV*VSLLALRTCVRTES
Trigger: GGACTCTGTCCTGACACAGGTCCTCAAAGCTAGCAGAGATACGCAGACATTGTGGCATCTGGGTAGAAGAATACTGTATTGTGTGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 90 bp ACACACTGTGCACTGCACACACAATACAGTATTCTTCTACCCAGATaGCACAATGTCTGCGTATCTCTGCTAGCTTTGAGGACCTGTGTC +
Preference number: 1 (lower is better)
Translates to: THCALHTQYSILLPR*HNVCVSLLALRTCV
Trigger: GACACAGGTCCTCAAAGCTAGCAGAGATACGCAGACATTGTGGCATCTGGGTAGAAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 90 bp CCAAGAGCAGAAGGAATGAGTGTGCACACACCACACACTGTGCACTaGACACACAATACAGTATTCTTCTACCCAGATGCCACAATGTCT +
Preference number: 1 (lower is better)
Translates to: PRAEGMSVHTPHTVH*THNTVFFYPDATMS
Trigger: AGACATTGTGGCATCTGGGTAGAAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATTCCTTCTGCTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 90 bp TTAGAGAAAACCACTGGTGAGCTACATGTAGCTTCTCAAAGCTACTaGTTACCTCTACACCCACTGCCTGTGCCCAAGAGCAGAAGGAAT +
Preference number: 1 (lower is better)
Translates to: LEKTTGELHVASQSY*LPLHPLPVPKSRRN
Trigger: ATTCCTTCTGCTCTTGGGCACAGGCAGTGGGTGTAGAGGTAACCAGTAGCTTTGAGAAGCTACATGTAGCTCACCAGTGGTTTTCTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 90 bp GGGCCAATAGCACATACCTTATATATGTTAGTGACTACCATGATATaGGAAAAGACGTGGACAAGTGCTCCCCAAGGATTCCGGAGACGG +
Preference number: 1 (lower is better)
Translates to: GPIAHTLYMLVTTMI*EKTWTSAPQGFRRR
Trigger: CCGTCTCCGGAATCCTTGGGGAGCACTTGTCCACGTCTTTTCTCATATCATGGTAGTCACTAACATATATAAGGTATGTGCTATTGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 90 bp CAAACCAGAAAGCAATTAGTGACTAAAGCAACAGTAAGCAGTAGGTaGACTGAAGTACATACTGCCGCAGGTCACCAATGGGTGACACAC +
Preference number: 1 (lower is better)
Translates to: QTRKQLVTKATVSSR*TEVHTAAGHQWVTH
Trigger: GTGTGTCACCCATTGGTGACCTGCGGCAGTATGTACTTCAGTGCACCTACTGCTTACTGTTGCTTTAGTCACTAATTGCTTTCTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 90 bp TCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATaGAACGTGGTTACTGAAACACCCACATTTGAAGTAGCTCAAGGG +
Preference number: 1 (lower is better)
Translates to: SHLKTQCSSLLNPQA*NVVTETPTFEVAQG
Trigger: CCCTTGAGCTACTTCAAATGTGGGTGTTTCAGTAACCACGTTCCATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 90 bp GCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTACACAGTaGCAGGAACAAATACTTAAAGAGATCAGTAAAATATGGATAGAG +
Preference number: 1 (lower is better)
Translates to: APHWDRTPSQLHSTQ*QEQILKEISKIWIE
Trigger: CTCTATCCATATTTTACTGATCTCTTTAAGTATTTGTTCCTGCCACTGTGTACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 90 bp TCTGCACAGAAAGCTGTAACAGTCATGCGAGGGTACAGTAATTATTaGACAAGGCAAATTTCTCACCACAGAGAGCAGTGGGGAAGTCAA +
Preference number: 1 (lower is better)
Translates to: SAQKAVTVMRGYSNY*TRQISHHREQWGSQ
Trigger: TTGACTTCCCCACTGCTCTCTGTGGTGAGAAATTTGCCTTGTTCAATAATTACTGTACCCTCGCATGACTGTTACAGCTTTCTGTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 90 bp GTATCTCTGCTAGCTTTGAGGACCTGTGTCAGGACAGAGTCCTCATaGTTAGTTCTTTCAATTCCATCCCACTGGCTTGTTCAGTATTTC +
Preference number: 1 (lower is better)
Translates to: VSLLALRTCVRTESS*LVLSIPSHWLVQYF
Trigger: GAAATACTGAACAAGCCAGTGGGATGGAATTGAAAGAACTAATCATGAGGACTCTGTCCTGACACAGGTCCTCAAAGCTAGCAGAGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 90 bp ACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATaGCAATCTGACTCCACAGTACCAGGAAGGGGAATGGGAAGGAGC +
Preference number: 1 (lower is better)
Translates to: TTYGYNDSRMKLVVS*QSDSTVPGRGMGRS
Trigger: GCTCCTTCCCATTCCCCTTCCTGGTACTGTGGAGTCAGATTGGCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 90 bp TTTTCTGACAGTCTGACTCAGCAGTATCAGAAATATTTGAGTACTTaGGGACAGAACAGTGCTTCACGTCATGAGCTCCTGGAGGCTTTA +
Preference number: 1 (lower is better)
Translates to: FSDSLTQQYQKYLST*GQNSASRHELLEAL
Trigger: TAAAGCCTCCAGGAGCTCATGACGTGAAGCACTGTTCTGTCCTCAAGTACTCAAATATTTCTGATACTGCTGAGTCAGACTGTCAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 90 bp GCACCAACAGTACAAAGCAGATACAAAGCAGTTTCAGAACTTTCTTaGGTGCTCTACACGCATAAACAGCACAAGAAAAGGCAACAAGCT +
Preference number: 1 (lower is better)
Translates to: APTVQSRYKAVSELS*VLYTHKQHKKRQQA
Trigger: AGCTTGTTGCCTTTTCTTGTGCTGTTTATGCGTGTAGAGCACTCAAGAAAGTTCTGAAACTGCTTTGTATCTGCTTTGTACTGTTGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 90 bp CAACTCAGAGGTAACAATAGAGTTTTCATTTCAATCGTAGGCATGTaGCACTTGGACAGTCATCTCTGCACAGAAAGCTGTAACAGTCAT +
Preference number: 1 (lower is better)
Translates to: QLRGNNRVFISIVGM*HLDSHLCTESCNSH
Trigger: ATGACTGTTACAGCTTTCTGTGCAGAGATGACTGTCCAAGTGCCACATGCCTACGATTGAAATGAAAACTCTATTGTTACCTCTGAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 90 bp AAAATATGGATAGAGCTCCAAACACGAGTTAGTGCTAGCTTTTTCTaGCAGTCTGACTCAGCAGTATCAGAAATATTTGAGTACTTGAGG +
Preference number: 1 (lower is better)
Translates to: KIWIELQTRVSASFF*QSDSAVSEIFEYLR
Trigger: CCTCAAGTACTCAAATATTTCTGATACTGCTGAGTCAGACTGTCAGAAAAAGCTAGCACTAACTCGTGTTTGGAGCTCTATCCATATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 90 bp ACCTTGGTTAGGACCATTCTCTGCCCAGTTACATTATGTTTGGCATaGTTAATAAAAAGCACACAACTTATGGCTACAATGATTCTAGAA +
Preference number: 1 (lower is better)
Translates to: TLVRTILCPVTLCLA*LIKSTQLMATMILE
Trigger: TTCTAGAATCATTGTAGCCATAAGTTGTGTGCTTTTTATTAATCATGCCAAACATAATGTAACTGGGCAGAGAATGGTCCTAACCAAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp AGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTGCGTACTGTGGGGCCCCAACTCTTGGCTGTaGCCAGCAGCACCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: SGEREHPGLGGEDCVLWGPNSWL*PAAPLG
Trigger: CCCCAGAGGTGCTGCTGGGCACAGCCAAGAGTTGGG...GCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp AGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTGCGTACTGTGGGGCAGAATCTCTCTCTGGTaGGGCTGCATGGTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SGEREHPGLGGEDCVLWGRISLW*GCMVSR
Trigger: CCTGCTGACCATGCAGCCGCACCAGAGAGAGATTCT...GCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR TCA 90 bp TCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTGCACGTCCAGTCCTCTaGGCCCTTGTCCTGACAAAT +
Preference number: 2 (lower is better)
Translates to: SSATGVVSVSTLGWVVRTARPVL*ALVLTN
Trigger: ATTTGTCAGGACAAGGGCTCAGAGGACTGGACGTGC...AGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp TATCCTTCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGTCTCTCTGGTGCGGCTaGATGGTCAGCAGGGCATCA +
Preference number: 2 (lower is better)
Translates to: YPSSATGVVSVSTLGWVVSLWCG*MVSRAS
Trigger: TGATGCCCTGCTGACCATGCAGCCGCACCAGAGAGA...CACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGAAGGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp TCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTGCACTTGCTGCAGGCTaGAACATCAGCCAAGGTATT +
Preference number: 2 (lower is better)
Translates to: SSATGVVSVSTLGWVVRTALAAG*NISQGI
Trigger: AATACCTTGGCTGATGTTGCAGCCTGCAGCAAGTGC...AGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR TCA 90 bp GCTGTGCCCAGCAGCACCTCTGGGGCACAAGGGCAGGCCCTCTTTAGAGAGAACTCCATTCAGACACGCTaGTCCAGAGGAAAGCAACAC +
Preference number: 2 (lower is better)
Translates to: AVPSSTSGAQGQALFRENSIQTR*SRGKQH
Trigger: GTGTTGCTTTCCTCTGGATCAGCGTGTCTGAATGGA...GTTCTCTCTAAAGAGGGCCTGCCCTTGTGCCCCAGAGGTGCTGCTGGGCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTTGTGGAGTTCCACCCTaGGACATCCCCAGAAACCGC +
Preference number: 2 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSCGVPP*DIPRNR
Trigger: GCGGTTTCTGGGGATGTCCCAGGGTGGAACTCCACA...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp TCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTAGAGGGAGGAACCACTaGATCTTTCAAACCAGAAAG +
Preference number: 2 (lower is better)
Translates to: SSATGVVSVSTLGWVVRTRGRNH*IFQTRK
Trigger: CTTTCTGGTTTGAAAGATGCAGTGGTTCCTCCCTCT...AGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR TCA 90 bp TATCCTTCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGTGCTAGCTTTTTCTaGCAGTCTGACTCAGCAGTA +
Preference number: 2 (lower is better)
Translates to: YPSSATGVVSVSTLGWVVSASFF*QSDSAV
Trigger: TACTGCTGAGTCAGACTGTCAGAAAAAGCTAGCACT...CACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGAAGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTGCTCAAGGGCGTATATaGACCAGCATGTGGAGTTCC +
Preference number: 2 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSAQGRI*TSMWSS
Trigger: GGAACTCCACATGCTGGTGCATATACGCCCTTGAGC...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CAA 90 bp AAGACGTGGACAAGTGCTCCCCAAGGATTCCGGAGACGGAAGCACTaGCTGCAGGCTGCAACATCAGCCAAGGTATTTCCACAAGCTCCT +
Preference number: 2 (lower is better)
Translates to: KTWTSAPQGFRRRKH*LQAATSAKVFPQAP
Trigger: AGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAGCCTGCAGCAAGTGCTTCCGTCTCCGGAATCCTTGGGGAGCACTTGTCCACGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR TCA 90 bp AGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTGCGTACTGTGGGGCAAATATTTGAGTACTTaGGGACAGAACAGTGCTTCA +
Preference number: 2 (lower is better)
Translates to: SGEREHPGLGGEDCVLWGKYLST*GQNSAS
Trigger: TGAAGCACTGTTCTGTCCTCAAGTACTCAAATATTT...GCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp TATCCTTCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGTTGGACAGTCATCTCTaGACAGAAAGCTGTAACAGT +
Preference number: 2 (lower is better)
Translates to: YPSSATGVVSVSTLGWVVLDSHL*TESCNS
Trigger: ACTGTTACAGCTTTCTGTGCAGAGATGACTGTCCAA...CACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGAAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR TCA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCACCAGGGAATCCAACCTaGGATGTCGGGGCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPPGNPT*DVGASL
Trigger: CAAAGAAGCCCCGACATCTCAGGTTGGATTCCCTGG...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTACAGTAAGCAGTAGGTaGACTGAAGTACATACTGCC +
Preference number: 2 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSTVSSR*TEVHTA
Trigger: GGCAGTATGTACTTCAGTGCACCTACTGCTTACTGT...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CCA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCACCAGGGGTCAAGAACTaGGAAGAAGAACACCGATGT +
Preference number: 2 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPPGVKN*EEEHRC
Trigger: ACATCGGTGTTCTTCTTCCCAGTTCTTGACCCCTGG...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCGCCCAGCAGCACCTCTaGGGCACAAGGGCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCAQQHL*GTRAGP
Trigger: AGGGCCTGCCCTTGTGCCCCAGAGGTGCTGCTGGGC...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CCA 90 bp ACAGTGCTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTGCCGCAGGTCACCAATaGGTGACACACACAGGGCTG +
Preference number: 2 (lower is better)
Translates to: TVLHVMSSWRLYYKLLYCAAGHQ*VTHTGL
Trigger: CAGCCCTGTGTGTGTCACCCATTGGTGACCTGCGGC...ACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAGCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTTTATGTAAATCCAAGTaGTGGGCCAGTGCCTGGGCG +
Preference number: 2 (lower is better)
Translates to: NECAHTTHCALHTQYSILLCKSK*WASAWA
Trigger: CGCCCAGGCACTGGCCCAGCACTTGGATTTACATAA...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCAAGATGCCACAATGTCTaGGTATCTCTGCTAGCTTTG +
Preference number: 2 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPRCHNV*VSLLAL
Trigger: CAAAGCTAGCAGAGATACGCAGACATTGTGGCATCT...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR TCA 90 bp CAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCAAATAAGGAAAGTGAGATGCCAGTaGCTAGAGCCAATTGGGGAA +
Preference number: 2 (lower is better)
Translates to: QAPALGKQLWSKGEVQIRKVRCQ*LEPIGE
Trigger: TTCCCCAATTGGCTCTAGTCACTGGCATCTCACTTT...CCTTATTTGCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp ACAGTGCTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTGACGGAAGCACTTGCTaGAGGCTGCAACATCAGCCA +
Preference number: 2 (lower is better)
Translates to: TVLHVMSSWRLYYKLLYCDGSTC*RLQHQP
Trigger: TGGCTGATGTTGCAGCCTGCAGCAAGTGCTTCCGTC...ACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAGCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp TATACTTTCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATGAAAGACGTGGACAAGTaGTCCCCAAGGATTCCGGAG +
Preference number: 2 (lower is better)
Translates to: YTFSFKDAVFLSAKSSGMKDVDK*SPRIPE
Trigger: CTCCGGAATCCTTGGGGAGCACTTGTCCACGTCTTT...CATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGAAAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCAGTTAGGACCATTCTCTaGCCAGTTACATTATGTTTG +
Preference number: 2 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPVRTIL*PVTLCL
Trigger: CAAACATAATGTAACTGGGCAGAGAATGGTCCTAAC...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCACTCAGGCATGGAACGTaGTTACTGAAACACCCACAT +
Preference number: 2 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSLRHGT*LLKHPH
Trigger: ATGTGGGTGTTTCAGTAACCACGTTCCATGCCTGAG...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CAA 90 bp AGAGGTAACAATAGAGTTTTCATTTCAATCGTAGGCATGTGGCACTaGGACAGTCATCTCTGCACAGAAAGCTGTAACAGTCATGCGAGG +
Preference number: 2 (lower is better)
Translates to: RGNNRVFISIVGMWH*DSHLCTESCNSHAR
Trigger: CCTCGCATGACTGTTACAGCTTTCTGTGCAGAGATGACTGTCCAAGTGCCACATGCCTACGATTGAAATGAAAACTCTATTGTTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp CTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTAGGTTGCCCACAGCTCAGCACTaGAACCTTTGTACTTCTCTC +
Preference number: 2 (lower is better)
Translates to: LHVMSSWRLYYKLLYCRLPTAQH*NLCTSL
Trigger: GAGAGAAGTACAAAGGTTGCAGTGCTGAGCTGTGGG...CAACCTACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCTCTGGTGCGGCTGCATaGTCAGCAGGGCATCATGTA +
Preference number: 2 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCSGAAA*SAGHHV
Trigger: TACATGATGCCCTGCTGACCATGCAGCCGCACCAGA...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCGGAAGAATCTCTCTCTaGTGCGGCTGCATGGTCAGC +
Preference number: 2 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCGRISL*CGCMVS
Trigger: GCTGACCATGCAGCCGCACCAGAGAGAGATTCTTCC...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR TCA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTGCACATAACGCTTCTTaGCAAGTGTTACACCTCTAT +
Preference number: 2 (lower is better)
Translates to: NECAHTTHCALHTQYSILAHNAS*QVLHLY
Trigger: ATAGAGGTGTAACACTTGTCAAGAAGCGTTATGTGC...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CCA 90 bp TATACTTTCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATGTCAAAGGAGTCAAAGTaGATAAGCCAAGACGGGCTG +
Preference number: 2 (lower is better)
Translates to: YTFSFKDAVFLSAKSSGMSKESK*ISQDGL
Trigger: CAGCCCGTCTTGGCTTATCCACTTTGACTCCTTTGA...CATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGAAAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CCA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTCACGTCATGAGCTCCTaGAGGCTTTATTACAAATTG +
Preference number: 2 (lower is better)
Translates to: NECAHTTHCALHTQYSILHVMSS*RLYYKL
Trigger: CAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTG...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCATATGCACCAGCATGTaGAGTTCCACCCTGGGACAT +
Preference number: 2 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCICTSM*SSTLGH
Trigger: ATGTCCCAGGGTGGAACTCCACATGCTGGTGCATAT...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCACTCCACAGTACACAGTaGCAGGAACAAATACTTAAA +
Preference number: 2 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSLHSTQ*QEQILK
Trigger: TTTAAGTATTTGTTCCTGCCACTGTGTACTGTGGAG...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR GCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCACAGCATCGATTCTCTaGCGAGCAGAGGTAAAAAGG +
Preference number: 2 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCTASIL*RAEVKR
Trigger: CCTTTTTACCTCTGCTCGGCAGAGAATCGATGCTGT...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR TCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCGTTATGGTCAAAAGGTaGAGTGCAAATAAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCVMVKR*SANKGL
Trigger: CAGCCCCTTATTTGCACTTCACCTTTTGACCATAAC...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR TCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCGTGAATAAAGGAACATaGCAGCATCGATTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCVNKGT*QHRFSA
Trigger: GGCAGAGAATCGATGCTGTCATGTTCCTTTATTCAC...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCCTAAATCCTCAGGCATaGAACGTGGTTACTGAAACA +
Preference number: 2 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCLNPQA*NVVTET
Trigger: TGTTTCAGTAACCACGTTCCATGCCTGAGGATTTAG...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR TCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCCTTTTTCTGACAGTCTaGCTCAGCAGTATCAGAAAT +
Preference number: 2 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCLFLTV*LSSIRN
Trigger: ATTTCTGATACTGCTGAGTCAGACTGTCAGAAAAAG...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 72 bp GAGCACCCTGGGCTGGGTGGTGAGGACTGCGTACTGTaGGGCGGCCCTTCCCAACTCTTGGCTGTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: EHPGLGGEDCVL*GGPSQLLAVPS
Trigger: GCTGGGCACAGCCAAGAGTTGGGAAGGGCCGCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp GGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTaGGTACTGTGGGGCGGCCCTTCCCAACTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: GEREHPGLGGED*VLWGGPSQLLA
Trigger: AGCCAAGAGTTGGGAAGGGCCGCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 72 bp TCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTaGGTGGTGAGGACTGCGTACTGTGGGGCGGCCCTT +
Preference number: 3 (lower is better)
Translates to: SATGVVSVSTLG*VVRTAYCGAAL
Trigger: AAGGGCCGCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CAA 90 bp TATCCTTCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGGTAGGCATGTGGCACTaGGACAGTCATCTCTGCACA +
Preference number: 3 (lower is better)
Translates to: YPSSATGVVSVSTLGWVVVGMWH*DSHLCT
Trigger: TGTGCAGAGATGACTGTCCAAGTGCCACATGCCTAC...CACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGAAGGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 72 bp GAAACCGCCCCTCCAAACGGCTCAAAGGAGTCAAAGTaGATAAGCCAAGACGGGCTGGAGACAGGACCAGGG +
Preference number: 3 (lower is better)
Translates to: ETAPPNGSKESK*ISQDGLETGPG
Trigger: CCCTGGTCCTGTCTCCAGCCCGTCTTGGCTTATCCACTTTGACTCCTTTGAGCCGTTTGGAGGGGCGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp CCAAGGATTCCGGAGACGGAAGCACTTGCTGCAGGCTaGAACATCAGCCAAGGTATTTCCACAAGCTCCTGC +
Preference number: 3 (lower is better)
Translates to: PRIPETEALAAG*NISQGISTSSC
Trigger: GCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAGCCTGCAGCAAGTGCTTCCGTCTCCGGAATCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp CAAGTGCTCCCCAAGGATTCCGGAGACGGAAGCACTTaGTGCAGGCTGCAACATCAGCCAAGGTATTTCCAC +
Preference number: 3 (lower is better)
Translates to: QVLPKDSGDGST*CRLQHQPRYFH
Trigger: GTGGAAATACCTTGGCTGATGTTGCAGCCTGCAGCAAGTGCTTCCGTCTCCGGAATCCTTGGGGAGCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 72 bp AGGTGCACTGAAGTACATACTGCCGCAGGTCACCAATaGGTGACACACACAGGGCTGCCAGGAGGAATTCTC +
Preference number: 3 (lower is better)
Translates to: RCTEVHTAAGHQ*VTHTGLPGGIL
Trigger: GAGAATTCCTCCTGGCAGCCCTGTGTGTGTCACCCATTGGTGACCTGCGGCAGTATGTACTTCAGTGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 72 bp CCAGTGACTAGAGCCAATTGGGGAAGAATCTCTCTCTaGTGCGGCTGCATGGTCAGCAGGGCATCATGTAGA +
Preference number: 3 (lower is better)
Translates to: PVTRANWGRISL*CGCMVSRASCR
Trigger: TCTACATGATGCCCTGCTGACCATGCAGCCGCACCAGAGAGAGATTCTTCCCCAATTGGCTCTAGTCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp GAAACACCCACATTTGAAGTAGCTCAAGGGCGTATATaGACCAGCATGTGGAGTTCCACCCTGGGACATCCC +
Preference number: 3 (lower is better)
Translates to: ETPTFEVAQGRI*TSMWSSTLGHP
Trigger: GGGATGTCCCAGGGTGGAACTCCACATGCTGGTGCATATACGCCCTTGAGCTACTTCAAATGTGGGTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp CTCAAAGCTACTGGTTACCTCTACACCCACTGCCTGTaGCCAAGAGCAGAAGGAATGAGTGTGCACACACCA +
Preference number: 3 (lower is better)
Translates to: LKATGYLYTHCL*PRAEGMSVHTP
Trigger: TGGTGTGTGCACACTCATTCCTTCTGCTCTTGGGCACAGGCAGTGGGTGTAGAGGTAACCAGTAGCTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp AGAGCCAATTGGGGAAGAATCTCTCTCTGGTGCGGCTaGATGGTCAGCAGGGCATCATGTAGAAAAGGATTC +
Preference number: 3 (lower is better)
Translates to: RANWGRISLWCG*MVSRASCRKGF
Trigger: GAATCCTTTTCTACATGATGCCCTGCTGACCATGCAGCCGCACCAGAGAGAGATTCTTCCCCAATTGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp AGTGACTACCATGATATGAGAAAAGACGTGGACAAGTaGTCCCCAAGGATTCCGGAGACGGAAGCACTTGCT +
Preference number: 3 (lower is better)
Translates to: SDYHDMRKDVDK*SPRIPETEALA
Trigger: AGCAAGTGCTTCCGTCTCCGGAATCCTTGGGGAGCACTTGTCCACGTCTTTTCTCATATCATGGTAGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp TCAATCGTAGGCATGTGGCACTTGGACAGTCATCTCTaGACAGAAAGCTGTAACAGTCATGCGAGGGTACAG +
Preference number: 3 (lower is better)
Translates to: SIVGMWHLDSHL*TESCNSHARVQ
Trigger: CTGTACCCTCGCATGACTGTTACAGCTTTCTGTGCAGAGATGACTGTCCAAGTGCCACATGCCTACGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp GAAGGAATGAGTGTGCACACACCACACACTGTGCACTaGACACACAATACAGTATTCTTCTACCCAGATGCC +
Preference number: 3 (lower is better)
Translates to: EGMSVHTPHTVH*THNTVFFYPDA
Trigger: GGCATCTGGGTAGAAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR-3UTR CAA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCACTTTTCATAGGTACCTaGGTTAGGACCATTCTCTGC +
Preference number: 3 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPLFIGT*VRTILC
Trigger: GCAGAGAATGGTCCTAACCAAGGTACCTATGAAAAG...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 72 bp GGTAGTAGCCTTCCCTATCATAAAGTGAGATGCCAGTaGCTAGAGCCAATTGGGGAAGAATCTCTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: GSSLPYHKVRCQ*LEPIGEESLSG
Trigger: ACCAGAGAGAGATTCTTCCCCAATTGGCTCTAGTCACTGGCATCTCACTTTATGATAGGGAAGGCTACTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp CAATACAGTATTCTTCTACCCAGATGCCACAATGTCTaGGTATCTCTGCTAGCTTTGAGGACCTGTGTCAGG +
Preference number: 3 (lower is better)
Translates to: QYSILLPRCHNV*VSLLALRTCVR
Trigger: CCTGACACAGGTCCTCAAAGCTAGCAGAGATACGCAGACATTGTGGCATCTGGGTAGAAGAATACTGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp GCACTGCACACACAATACAGTATTCTTCTACCCAGATaGCACAATGTCTGCGTATCTCTGCTAGCTTTGAGG +
Preference number: 3 (lower is better)
Translates to: ALHTQYSILLPR*HNVCVSLLALR
Trigger: CCTCAAAGCTAGCAGAGATACGCAGACATTGTGGCATCTGGGTAGAAGAATACTGTATTGTGTGTGCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 72 bp CTAGCTTTGAGGACCTGTGTCAGGACAGAGTCCTCATaGTTAGTTCTTTCAATTCCATCCCACTGGCTTGTT +
Preference number: 3 (lower is better)
Translates to: LALRTCVRTESS*LVLSIPSHWLV
Trigger: AACAAGCCAGTGGGATGGAATTGAAAGAACTAATCATGAGGACTCTGTCCTGACACAGGTCCTCAAAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp AAGCAATTAGTGACTAAAGCAACAGTAAGCAGTAGGTaGACTGAAGTACATACTGCCGCAGGTCACCAATGG +
Preference number: 3 (lower is better)
Translates to: KQLVTKATVSSR*TEVHTAAGHQW
Trigger: CCATTGGTGACCTGCGGCAGTATGTACTTCAGTGCACCTACTGCTTACTGTTGCTTTAGTCACTAATTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 72 bp CAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTaGGGAAACAGTTATGGTCAAAAGGTGAAGTGCAAA +
Preference number: 3 (lower is better)
Translates to: QHQPRYFHKLLL*GNSYGQKVKCK
Trigger: TTTGCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 72 bp AAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATaGAACGTGGTTACTGAAACACCCACATTTGAAGTA +
Preference number: 3 (lower is better)
Translates to: KTQCSSLLNPQA*NVVTETPTFEV
Trigger: TACTTCAAATGTGGGTGTTTCAGTAACCACGTTCCATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 72 bp AGTCTGACTCAGCAGTATCAGAAATATTTGAGTACTTaGGGACAGAACAGTGCTTCACGTCATGAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: SLTQQYQKYLST*GQNSASRHELL
Trigger: CAGGAGCTCATGACGTGAAGCACTGTTCTGTCCTCAAGTACTCAAATATTTCTGATACTGCTGAGTCAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp GGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATaGCAATCTGACTCCACAGTACCAGGAAGGGGAATG +
Preference number: 3 (lower is better)
Translates to: GYNDSRMKLVVS*QSDSTVPGRGM
Trigger: CATTCCCCTTCCTGGTACTGTGGAGTCAGATTGGCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 72 bp TATACAAGGCAAGTAATATTGCTTCCACTTTACAGCTaGCAGTCTGAAGCAGAGGAAGAAAGCAGAGACGCA +
Preference number: 3 (lower is better)
Translates to: YTRQVILLPLYS*QSEAEEESRDA
Trigger: TGCGTCTCTGCTTTCTTCCTCTGCTTCAGACTGTCAGCTGTAAAGTGGAAGCAATATTACTTGCCTTGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 72 bp CTTGAGGACAGAACAGTGCTTCACGTCATGAGCTCCTaGAGGCTTTATTACAAATTGTTATACTGTAGGTTG +
Preference number: 3 (lower is better)
Translates to: LEDRTVLHVMSS*RLYYKLLYCRL
Trigger: CAACCTACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAGCACTGTTCTGTCCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 72 bp GGTAACAATAGAGTTTTCATTTCAATCGTAGGCATGTaGCACTTGGACAGTCATCTCTGCACAGAAAGCTGT +
Preference number: 3 (lower is better)
Translates to: GNNRVFISIVGM*HLDSHLCTESC
Trigger: ACAGCTTTCTGTGCAGAGATGACTGTCCAAGTGCCACATGCCTACGATTGAAATGAAAACTCTATTGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CCA 72 bp TGGGACAGAACACCGAGTCAACTCCACAGTACACAGTaGCAGGAACAAATACTTAAAGAGATCAGTAAAATA +
Preference number: 3 (lower is better)
Translates to: WDRTPSQLHSTQ*QEQILKEISKI
Trigger: TATTTTACTGATCTCTTTAAGTATTTGTTCCTGCCACTGTGTACTGTGGAGTTGACTCGGTGTTCTGTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 72 bp TTTGAGTACTTGAGGACAGAACAGTGCTTCACGTCATaGGCTCCTGGAGGCTTTATTACAAATTGTTATACT +
Preference number: 3 (lower is better)
Translates to: FEYLRTEQCFTS*APGGFITNCYT
Trigger: AGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAGCACTGTTCTGTCCTCAAGTACTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 72 bp ATAGAGCTCCAAACACGAGTTAGTGCTAGCTTTTTCTaGCAGTCTGACTCAGCAGTATCAGAAATATTTGAG +
Preference number: 3 (lower is better)
Translates to: IELQTRVSASFF*QSDSAVSEIFE
Trigger: CTCAAATATTTCTGATACTGCTGAGTCAGACTGTCAGAAAAAGCTAGCACTAACTCGTGTTTGGAGCTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 72 bp GTACAAAGCAGATACAAAGCAGTTTCAGAACTTTCTTaGGTGCTCTACACGCATAAACAGCACAAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: VQSRYKAVSELS*VLYTHKQHKKR
Trigger: CCTTTTCTTGTGCTGTTTATGCGTGTAGAGCACTCAAGAAAGTTCTGAAACTGCTTTGTATCTGCTTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR GCA 72 bp AAAGCAGATACAAAGCAGTTTCAGAACTTTCTTGAGTaGTCTACACGCATAAACAGCACAAGAAAAGGCAAC +
Preference number: 3 (lower is better)
Translates to: KADTKQFQNFLE*STRINSTRKGN
Trigger: GTTGCCTTTTCTTGTGCTGTTTATGCGTGTAGAGCACTCAAGAAAGTTCTGAAACTGCTTTGTATCTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 72 bp GTCTTACAAACATTAAGTACTGCACATAACGCTTCTTaGCAAGTGTTACACCTCTATATGGTACAAGTGACC +
Preference number: 3 (lower is better)
Translates to: VLQTLSTAHNAS*QVLHLYMVQVT
Trigger: GGTCACTTGTACCATATAGAGGTGTAACACTTGTCAAGAAGCGTTATGTGCAGTACTTAATGTTTGTAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR TCA 72 bp TTTCCATTTGTTTCTGACCCATCATGTCAAGGTGGATaGCGTAAGAGAAACCACATATTCACTGTTATAGCT +
Preference number: 3 (lower is better)
Translates to: FPFVSDPSCQGG*RKRNHIFTVIA
Trigger: AGCTATAACAGTGAATATGTGGTTTCTCTTACGTCATCCACCTTGACATGATGGGTCAGAAACAAATGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp TCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTGCCGCAGGTCACCAATaGGTGACACACACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSATGVVSVSTLGWVVRTAAGHQ*VTHTGL
Trigger: CAGCCCTGTGTGTGTCACCCATTGGTGACCTGCGGC...AGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTGCCGAGCGGGAGAGCTaGAGAGCCGACAGCCACTCG +
Preference number: 4 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSAERES*RADSHS
Trigger: CGAGTGGCTGTCGGCTCTTCAGCTCTCCCGCTCGGC...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp TCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTTCTCTCTGGTGCGGCTaGATGGTCAGCAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: SSATGVVSVSTLGWVVRTSLWCG*MVSRAS
Trigger: TGATGCCCTGCTGACCATGCAGCCGCACCAGAGAGA...AGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp AGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTGCGTACTGTGGGGCGGAGACGGAAGCACTTaGTGCAGGCTGCAACATCAG +
Preference number: 4 (lower is better)
Translates to: SGEREHPGLGGEDCVLWGGDGST*CRLQHQ
Trigger: CTGATGTTGCAGCCTGCAGCAAGTGCTTCCGTCTCC...GCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTGCGTACTGTGGGGCCACCACAGAGAGCAGTaGGGAAGTCAAGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SGEREHPGLGGEDCVLWGHHREQ*GSQEEA
Trigger: TGCCTCCTCTTGACTTCCCCACTGCTCTCTGTGGTG...GCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp GCTGTGCCCAGCAGCACCTCTGGGGCACAAGGGCAGGCCCTCTTTAGAGAGAACCTGAACCCAGCTGGATaGGTCCAAGGCCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: AVPSSTSGAQGQALFRENLNPAG*VQGLCS
Trigger: AGAGCACAGGCCTTGGACCCATCCAGCTGGGTTCAG...GTTCTCTCTAAAGAGGGCCTGCCCTTGTGCCCCAGAGGTGCTGCTGGGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp GCTGTGCCCAGCAGCACCTCTGGGGCACAAGGGCAGGCCCTCTTTAGAGAGAACCCAGGGAATCCAACCTaGGATGTCGGGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: AVPSSTSGAQGQALFRENPGNPT*DVGASL
Trigger: CAAAGAAGCCCCGACATCTCAGGTTGGATTCCCTGG...GTTCTCTCTAAAGAGGGCCTGCCCTTGTGCCCCAGAGGTGCTGCTGGGCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTAAGCAGAGCACACCATaGCGTAGGCGCCCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSKQSTP*RRRPRR
Trigger: TCGGCGAGGGCGCCTACGGCATGGTGTGCTCTGCTT...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp TATCCTTCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGGACGGAAGCACTTGCTaGAGGCTGCAACATCAGCCA +
Preference number: 4 (lower is better)
Translates to: YPSSATGVVSVSTLGWVVDGSTC*RLQHQP
Trigger: TGGCTGATGTTGCAGCCTGCAGCAAGTGCTTCCGTC...CACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGAAGGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp TCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTAAAGACGTGGACAAGTaGTCCCCAAGGATTCCGGAG +
Preference number: 4 (lower is better)
Translates to: SSATGVVSVSTLGWVVRTKDVDK*SPRIPE
Trigger: CTCCGGAATCCTTGGGGAGCACTTGTCCACGTCTTT...AGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp AGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTGCGTACTGTGGGGCCCCACAGCTCAGCACTaGAACCTTTGTACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SGEREHPGLGGEDCVLWGPTAQH*NLCTSL
Trigger: GAGAGAAGTACAAAGGTTGCAGTGCTGAGCTGTGGG...GCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTGTGAGCACCCTGGGCTaGGTGGTGAGGACTGCGTAC +
Preference number: 4 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSVSTLG*VVRTAY
Trigger: GTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCAC...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp AAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTGACAGCCGAGCGGGAGAGCTaGAGAGCCGACAGCCACTCG +
Preference number: 4 (lower is better)
Translates to: KAAPPLLELTVLNSRYLTAERES*RADSHS
Trigger: CGAGTGGCTGTCGGCTCTTCAGCTCTCCCGCTCGGC...TGTCAGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR GCA 90 bp AAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTGACCCCACGTCGAACACCTaGCCGCGGACCATCTCCGGG +
Preference number: 4 (lower is better)
Translates to: KGSASLARAHCIKLQVPDPTSNT*PRTISG
Trigger: CCCGGAGATGGTCCGCGGGCAGGTGTTCGACGTGGG...GTCAGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR GCA 90 bp TATCCTTCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGTTATGTAAATCCAAGTaGTGGGCCAGTGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: YPSSATGVVSVSTLGWVVLCKSK*WASAWA
Trigger: CGCCCAGGCACTGGCCCAGCACTTGGATTTACATAA...CACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGAAGGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTGCGTACTGTGGGGCCTCAGGCATGGAACGTaGTTACTGAAACACCCACAT +
Preference number: 4 (lower is better)
Translates to: SGEREHPGLGGEDCVLWGLRHGT*LLKHPH
Trigger: ATGTGGGTGTTTCAGTAACCACGTTCCATGCCTGAG...GCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTGAGACGCAGAATGACTaGCCCACAGCCAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSETQND*PTASRS
Trigger: ACTGCGGCTGGCTGTGGGCCAGTCATTCTGCGTCTC...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AAGGAGTCAAAGTGGATAAGCCAAGACGGGCTGGAGACAGGACCAGGGGTCAAGCGATGTACGAGAGGTTaGTGTAGCGCGGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: KESKWISQDGLETGPGVKRCTRG*CSAAPR
Trigger: ACGTGGGGCCGCGCTACACCAACCTCTCGTACATCG...CTTGACCCCTGGTCCTGTCTCCAGCCCGTCTTGGCTTATCCACTTTGACTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp TCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTAGTGCTAGCTTTTTCTaGCAGTCTGACTCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SSATGVVSVSTLGWVVRTSASFF*QSDSAV
Trigger: TACTGCTGAGTCAGACTGTCAGAAAAAGCTAGCACT...AGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp GGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTGACAAAAAGCAGAGCACACCATaGCGTAGGCGCCCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: GSASLARAHCIKLQVPDKKQSTP*RRRPRR
Trigger: TCGGCGAGGGCGCCTACGGCATGGTGTGCTCTGCTT...TTTGTCAGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR GCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTGTCGAACTTGAATGGTaGTTCGGCGATGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSVELEW*FGDGLV
Trigger: GACGAGCCCATCGCCGAAGCACCATTCAAGTTCGAC...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTGCGTACTGTGGGGCTTAAGATCTGTATCCTaGCTGGAATCTAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SGEREHPGLGGEDCVLWGLRSVS*LESSSL
Trigger: GAGACTGCTAGATTCCAGCCAGGATACAGATCTTAA...GCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTGCGTACTGTGGGGCCTAAATCCTCAGGCATaGAACGTGGTTACTGAAACA +
Preference number: 4 (lower is better)
Translates to: SGEREHPGLGGEDCVLWGLNPQA*NVVTET
Trigger: TGTTTCAGTAACCACGTTCCATGCCTGAGGATTTAG...GCCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp TTGCTGCAGGCTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGGAGGAGGCACCGCACTaGGACAGAACACCGAGTCAA +
Preference number: 4 (lower is better)
Translates to: LLQAATSAKVFPQAPALGEEAPH*DRTPSQ
Trigger: TTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTC...CCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAGCCTGCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCAAGCAGAGACGCAGAATaGCTGGCCCACAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPSRDAE*LAHSQP
Trigger: CGGCTGGCTGTGGGCCAGTCATTCTGCGTCTCTGCT...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTTACACCCACTGCCTGTaGCCAAGAGCAGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSYTHCL*PRAEGM
Trigger: CATTCCTTCTGCTCTTGGGCACAGGCAGTGGGTGTA...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp ACAAAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTCTCGGACCGATTGCCTaGCTGCCTGCCAGACTGACG +
Preference number: 4 (lower is better)
Translates to: TKGSASLARAHCIKLQVPLGPIA*LPARLT
Trigger: CGTCAGTCTGGCAGGCAGGCAGGCAATCGGTCCGAG...AGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp AAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTGACCGATGTACGAGAGGTTaGTGTAGCGCGGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: KGSASLARAHCIKLQVPDRCTRG*CSAAPR
Trigger: ACGTGGGGCCGCGCTACACCAACCTCTCGTACATCG...GTCAGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp TCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTAAGATAATGCTTCCCTaGAAAGATGGGCCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: SSATGVVSVSTLGWVVRTKIMLP*KDGPVR
Trigger: TCTAACAGGCCCATCTTTCCAGGGAAGCATTATCTT...AGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp TATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCGCCCAGCAGCACCTCTaGGGCACAAGGGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: YFHKLLLWGNSYGQKVKCAQQHL*GTRAGP
Trigger: AGGGCCTGCCCTTGTGCCCCAGAGGTGCTGCTGGGC...GCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCAGAGGACTGCGTACTGTaGGGCGGCCCTTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPEDCVL*GGPSQL
Trigger: GAGTTGGGAAGGGCCGCCCCACAGTACGCAGTCCTC...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp TATCCTTCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGTCCTCTTGTGTGGGTTaGATGTCAACATTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: YPSSATGVVSVSTLGWVVSSCVG*MSTFCP
Trigger: TGGACAAAATGTTGACATTCAACCCACACAAGAGGA...CACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGAAGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp GCTGTGCCCAGCAGCACCTCTGGGGCACAAGGGCAGGCCCTCTTTAGAGAGAACGCACATAACGCTTCTTaGCAAGTGTTACACCTCTAT +
Preference number: 4 (lower is better)
Translates to: AVPSSTSGAQGQALFRENAHNAS*QVLHLY
Trigger: ATAGAGGTGTAACACTTGTCAAGAAGCGTTATGTGC...GTTCTCTCTAAAGAGGGCCTGCCCTTGTGCCCCAGAGGTGCTGCTGGGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp GCTGTGCCCAGCAGCACCTCTGGGGCACAAGGGCAGGCCCTCTTTAGAGAGAACTCACCAAATGTCGAGTaGAGCTGCCACTTTAAATCT +
Preference number: 4 (lower is better)
Translates to: AVPSSTSGAQGQALFRENSPNVE*SCHFKS
Trigger: AGATTTAAAGTGGCAGCTTCACTCGACATTTGGTGA...GTTCTCTCTAAAGAGGGCCTGCCCTTGTGCCCCAGAGGTGCTGCTGGGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp TCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTTATACATCTTTCATTTaGTCGATGGTTGGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: SSATGVVSVSTLGWVVRTYTSFI*SMVGAR
Trigger: TCGAGCACCAACCATCGAGCAAATGAAAGATGTATA...AGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp TTGCTGCAGGCTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGTACCTCTACACCCACTaGCTGTGCCCAAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLQAATSAKVFPQAPALGYLYTH*LCPRAE
Trigger: TTCTGCTCTTGGGCACAGGCAGTGGGTGTAGAGGTA...CCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAGCCTGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CAA 72 bp ACAAGTGCTCCCCAAGGATTCCGGAGACGGAAGCACTaGCTGCAGGCTGCAACATCAGCCAAGGTATTTCCA +
Preference number: 4 (lower is better)
Translates to: TSAPQGFRRRKH*LQAATSAKVFP
Trigger: TGGAAATACCTTGGCTGATGTTGCAGCCTGCAGCAAGTGCTTCCGTCTCCGGAATCCTTGGGGAGCACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp AAGGAGTCAAAGTGGATAAGCCAAGACGGGCTGGAGACAGGACCAGGGGTCAAGATTCCATGTCGAACTTaGATGGTGCTTCGGCGATGG +
Preference number: 4 (lower is better)
Translates to: KESKWISQDGLETGPGVKIPCRT*MVLRRW
Trigger: CCATCGCCGAAGCACCATTCAAGTTCGACATGGAAT...CTTGACCCCTGGTCCTGTCTCCAGCCCGTCTTGGCTTATCCACTTTGACTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp TCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGAGGACTAAATATTTGAGTACTTaGGGACAGAACAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SSATGVVSVSTLGWVVRTKYLST*GQNSAS
Trigger: TGAAGCACTGTTCTGTCCTCAAGTACTCAAATATTT...AGTCCTCACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp AAGGAGTCAAAGTGGATAAGCCAAGACGGGCTGGAGACAGGACCAGGGGTCAAGTCCATTCAGACACGCTaGTCCAGAGGAAAGCAACAC +
Preference number: 4 (lower is better)
Translates to: KESKWISQDGLETGPGVKSIQTR*SRGKQH
Trigger: GTGTTGCTTTCCTCTGGATCAGCGTGTCTGAATGGA...CTTGACCCCTGGTCCTGTCTCCAGCCCGTCTTGGCTTATCCACTTTGACTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCAAGAAGTTCAGGAGGATaGGGAGATGGGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPRSSGG*GDGRGH
Trigger: GTGCCCACGCCCATCTCCTCATCCTCCTGAACTTCT...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp GCTGTGCCCAGCAGCACCTCTGGGGCACAAGGGCAGGCCCTCTTTAGAGAGAACAGTGACACTGCTGGGTaGAGTACTTCCTTTTTATTT +
Preference number: 4 (lower is better)
Translates to: AVPSSTSGAQGQALFRENSDTAG*STSFLF
Trigger: AAATAAAAAGGAAGTACTGCACCCAGCAGTGTCACT...GTTCTCTCTAAAGAGGGCCTGCCCTTGTGCCCCAGAGGTGCTGCTGGGCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp AAGGAGTCAAAGTGGATAAGCCAAGACGGGCTGGAGACAGGACCAGGGGTCAAGAAAGTGAGATGCCAGTaGCTAGAGCCAATTGGGGAA +
Preference number: 4 (lower is better)
Translates to: KESKWISQDGLETGPGVKKVRCQ*LEPIGE
Trigger: TTCCCCAATTGGCTCTAGTCACTGGCATCTCACTTT...CTTGACCCCTGGTCCTGTCTCCAGCCCGTCTTGGCTTATCCACTTTGACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp TATACTTTCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATGCCCTGGGCTGGGTGGTaGGGACTGCGTACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: YTFSFKDAVFLSAKSSGMPWAGW*GLRTVG
Trigger: CCCCACAGTACGCAGTCCTCACCACCCAGCCCAGGG...CATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGAAAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp AAGGAGTCAAAGTGGATAAGCCAAGACGGGCTGGAGACAGGACCAGGGGTCAAGCTTCCACTTTACAGCTaGCAGTCTGAAGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KESKWISQDGLETGPGVKLPLYS*QSEAEE
Trigger: TTCCTCTGCTTCAGACTGTCAGCTGTAAAGTGGAAG...CTTGACCCCTGGTCCTGTCTCCAGCCCGTCTTGGCTTATCCACTTTGACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp AAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTGACGGCTTGAGGTCACGGTaGAGAACGTTAGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: KGSASLARAHCIKLQVPDGLRSR*RTLAEW
Trigger: CCATTCAGCTAACGTTCTGCACCGTGACCTCAAGCC...GTCAGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR GCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTAGAGGGAGGAACCACTaGATCTTTCAAACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSRGRNH*IFQTRK
Trigger: CTTTCTGGTTTGAAAGATGCAGTGGTTCCTCCCTCT...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp AAGGAGTCAAAGTGGATAAGCCAAGACGGGCTGGAGACAGGACCAGGGGTCAAGACAGCATCGATTCTCTaGCGAGCAGAGGTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: KESKWISQDGLETGPGVKTASIL*RAEVKR
Trigger: CCTTTTTACCTCTGCTCGGCAGAGAATCGATGCTGT...CTTGACCCCTGGTCCTGTCTCCAGCCCGTCTTGGCTTATCCACTTTGACTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTCCCAACTCTTGGCTGTaGCCAGCAGCACCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NECAHTTHCALHTQYSILPNSWL*PAAPLG
Trigger: CCCCAGAGGTGCTGCTGGGCACAGCCAAGAGTTGGG...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp CAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCAAATAAGGGTTGCCCAGGATGTCTaGCCAGCAGTGGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QAPALGKQLWSKGEVQIRVAQDV*PAVGLQ
Trigger: CTGCAACCCCACTGCTGGGCAGACATCCTGGGCAAC...CCTTATTTGCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTCAGACCAAATATCAATaGACTTGGTGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSQTKYQ*TWCSPW
Trigger: CCAAGGGCTACACCAAGTCCATTGATATTTGGTCTG...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp TTGCTGCAGGCTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGTCAATCGTAGGCATGTaGCACTTGGACAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: LLQAATSAKVFPQAPALGSIVGM*HLDSHL
Trigger: GAGATGACTGTCCAAGTGCCACATGCCTACGATTGA...CCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAGCCTGCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp TTGCTGCAGGCTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGGCTTCTCAAAGCTACTaGTTACCTCTACACCCACTG +
Preference number: 4 (lower is better)
Translates to: LLQAATSAKVFPQAPALGASQSY*LPLHPL
Trigger: CAGTGGGTGTAGAGGTAACCAGTAGCTTTGAGAAGC...CCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAGCCTGCAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTAGATATGGTCATTGCTaGGGTGTTGTGTCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSRYGHC*GVVSSR
Trigger: TCTTGAAGACACAACACCTCAGCAATGACCATATCT...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp AAGGAGTCAAAGTGGATAAGCCAAGACGGGCTGGAGACAGGACCAGGGGTCAAGGTGAATAAAGGAACATaGCAGCATCGATTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KESKWISQDGLETGPGVKVNKGT*QHRFSA
Trigger: GGCAGAGAATCGATGCTGTCATGTTCCTTTATTCAC...CTTGACCCCTGGTCCTGTCTCCAGCCCGTCTTGGCTTATCCACTTTGACTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp CTAGAAACAAAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTCGAACTTGAATGGTaGTTCGGCGATGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: LETKGSASLARAHCIKLQVELEW*FGDGLV
Trigger: GACGAGCCCATCGCCGAAGCACCATTCAAGTTCGAC...CTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTTTGTTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR GCA 90 bp TATACTTTCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATGCTGGGTGGTGAGGACTaGGTACTGTGGGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: YTFSFKDAVFLSAKSSGMLGGED*VLWGGP
Trigger: AGGGCCGCCCCACAGTACGCAGTCCTCACCACCCAG...CATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGAAAGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCAATACTGCTCCAGATATaGGTGGGCCAGAGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPILLQI*VGQSLF
Trigger: GAACAGGCTCTGGCCCACCCATATCTGGAGCAGTAT...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp CTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATGGAAGAATCTCTCTCTaGTGCGGCTGCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LQHQPRYFHKLLLWGNSYGRISL*CGCMVS
Trigger: GCTGACCATGCAGCCGCACCAGAGAGAGATTCTTCC...ATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp TATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCTGTGGAGTTCCACCCTaGGACATCCCCAGAAACCGC +
Preference number: 4 (lower is better)
Translates to: YFHKLLLWGNSYGQKVKCCGVPP*DIPRNR
Trigger: GCGGTTTCTGGGGATGTCCCAGGGTGGAACTCCACA...GCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp TATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCGCACGTCCAGTCCTCTaGGCCCTTGTCCTGACAAAT +
Preference number: 4 (lower is better)
Translates to: YFHKLLLWGNSYGQKVKCARPVL*ALVLTN
Trigger: ATTTGTCAGGACAAGGGCTCAGAGGACTGGACGTGC...GCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp AAGGAGTCAAAGTGGATAAGCCAAGACGGGCTGGAGACAGGACCAGGGGTCAAGTCATGTCAAGGTGGATaGCGTAAGAGAAACCACATA +
Preference number: 4 (lower is better)
Translates to: KESKWISQDGLETGPGVKSCQGG*RKRNHI
Trigger: TATGTGGTTTCTCTTACGTCATCCACCTTGACATGA...CTTGACCCCTGGTCCTGTCTCCAGCCCGTCTTGGCTTATCCACTTTGACTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTGTTTCAGAACTTTCTTaGGTGCTCTACACGCATAAA +
Preference number: 4 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSVSELS*VLYTHK
Trigger: TTTATGCGTGTAGAGCACTCAAGAAAGTTCTGAAAC...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCCCCACGTCGAACACCTaGCCGCGGACCATCTCCGGG +
Preference number: 4 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCPTSNT*PRTISG
Trigger: CCCGGAGATGGTCCGCGGGCAGGTGTTCGACGTGGG...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp CTAGAAACAAAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGATCATGGTCTGGATCTaGAACACGGGCCAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LETKGSASLARAHCIKLQIMVWI*NTGQAK
Trigger: TTTGGCCTGGCCCGTGTTGCAGATCCAGACCATGAT...CTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTTTGTTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR GCA 90 bp TTGCTGCAGGCTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGGCATTTCTGCCAGAATaGAGCCTACAGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: LLQAATSAKVFPQAPALGAFLPE*SLQTKY
Trigger: ATATTTGGTCTGTAGGCTGCATTCTGGCAGAAATGC...CCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAGCCTGCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp CTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATTCTGTGTCCCGTCAATaGTGTGTGGACCTTCAGACG +
Preference number: 4 (lower is better)
Translates to: LQHQPRYFHKLLLWGNSYSVSRQ*CVDLQT
Trigger: CGTCTGAAGGTCCACACAGCATTGACGGGACACAGA...ATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCATGTAAATCCAAGTGCTaGGCCAGTGCCTGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSCKSKC*ASAWAA
Trigger: TGCCGCCCAGGCACTGGCCCAGCACTTGGATTTACA...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp CTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTAGGTTGAGGAGGATGAGGAGATaGGCGTGGGCACCGCCTACC +
Preference number: 4 (lower is better)
Translates to: LHVMSSWRLYYKLLYCRLRRMRR*AWAPPT
Trigger: GGTAGGCGGTGCCCACGCCCATCTCCTCATCCTCCT...CAACCTACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp CAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCAAATAAGGAGTTCTGAACCCAGCTaGATGGGTCCAAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QAPALGKQLWSKGEVQIRSSEPS*MGPRPV
Trigger: CACAGGCCTTGGACCCATCCAGCTGGGTTCAGAACT...CCTTATTTGCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp CTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATCAGTGCTTCACGTCATaGGCTCCTGGAGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: LQHQPRYFHKLLLWGNSYQCFTS*APGGFI
Trigger: AATAAAGCCTCCAGGAGCTCATGACGTGAAGCACTG...ATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTGGGTACAGTAATTATTaGACAAGGCAAATTTCTCAC +
Preference number: 4 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSGYSNY*TRQISH
Trigger: GTGAGAAATTTGCCTTGTTCAATAATTACTGTACCC...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp TATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCGCTCAAGGGCGTATATaGACCAGCATGTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: YFHKLLLWGNSYGQKVKCAQGRI*TSMWSS
Trigger: GGAACTCCACATGCTGGTGCATATACGCCCTTGAGC...GCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp CAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCAAATAAGGTGTGTGATCATGGTCTaGATCTGCAACACGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QAPALGKQLWSKGEVQIRCVIMV*ICNTGQ
Trigger: CTGGCCCGTGTTGCAGATCCAGACCATGATCACACA...CCTTATTTGCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp TATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCCATGTCGAACTTGAATaGTGCTTCGGCGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: YFHKLLLWGNSYGQKVKCHVELE*CFGDGL
Trigger: GAGCCCATCGCCGAAGCACCATTCAAGTTCGACATG...GCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AAGGAGTCAAAGTGGATAAGCCAAGACGGGCTGGAGACAGGACCAGGGGTCAAGCTCCACAGTACACAGTaGCAGGAACAAATACTTAAA +
Preference number: 4 (lower is better)
Translates to: KESKWISQDGLETGPGVKLHSTQ*QEQILK
Trigger: TTTAAGTATTTGTTCCTGCCACTGTGTACTGTGGAG...CTTGACCCCTGGTCCTGTCTCCAGCCCGTCTTGGCTTATCCACTTTGACTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
3UTR CAA 72 bp TGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTaGTTTCTGACCCATCATGTCAAGGTGGATGACGTA +
Preference number: 4 (lower is better)
Translates to: WCNPGGLALDFH*FLTHHVKVDDV
Trigger: TACGTCATCCACCTTGACATGATGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp AAGGAGTCAAAGTGGATAAGCCAAGACGGGCTGGAGACAGGACCAGGGGTCAAGAGACTTGCTATTTACTaGGTACTTGCTTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: KESKWISQDGLETGPGVKRLAIY*VLALKY
Trigger: GTACTTCAAAGCAAGTACTCAGTAAATAGCAAGTCT...CTTGACCCCTGGTCCTGTCTCCAGCCCGTCTTGGCTTATCCACTTTGACTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp AAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTGACAGCATTTCTGCCAGAATaGAGCCTACAGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: KAAPPLLELTVLNSRYLTAFLPE*SLQTKY
Trigger: ATATTTGGTCTGTAGGCTGCATTCTGGCAGAAATGC...TGTCAGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR GCA 90 bp CAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCAAATAAGGGCACTTGCTGCAGGCTaGAACATCAGCCAAGGTATT +
Preference number: 4 (lower is better)
Translates to: QAPALGKQLWSKGEVQIRALAAG*NISQGI
Trigger: AATACCTTGGCTGATGTTGCAGCCTGCAGCAAGTGC...CCTTATTTGCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTTGCTTGTGTGATCATGGTCTaGATCTGCAACACGGGCCAG +
Preference number: 4 (lower is better)
Translates to: MDLEEHNILETKGSASLACVIMV*ICNTGQ
Trigger: CTGGCCCGTGTTGCAGATCCAGACCATGATCACACA...AGCAAGGGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTTTCAATCCTCTTGTGTaGGTTGAATGTCAACATTTT +
Preference number: 4 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSFNPLV*VECQHF
Trigger: AAAATGTTGACATTCAACCCACACAAGAGGATTGAA...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTTGCTATACTGCTCCAGATATaGGTGGGCCAGAGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: MDLEEHNILETKGSASLAILLQI*VGQSLF
Trigger: GAACAGGCTCTGGCCCACCCATATCTGGAGCAGTAT...AGCAAGGGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp GACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTTGCTAGACATGTCGAACTTGAATaGTGCTTCGGCGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: DLEEHNILETKGSASLARHVELE*CFGDGL
Trigger: GAGCCCATCGCCGAAGCACCATTCAAGTTCGACATG...TCTAGCAAGGGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp CAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCAAATAAGGCCAGGGGTCAAGAACTaGGAAGAAGAACACCGATGT +
Preference number: 4 (lower is better)
Translates to: QAPALGKQLWSKGEVQIRPGVKN*EEEHRC
Trigger: ACATCGGTGTTCTTCTTCCCAGTTCTTGACCCCTGG...CCTTATTTGCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp CTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTAGGTTGCCCGTCAATGCTGTGTaGACCTTCAGACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LHVMSSWRLYYKLLYCRLPVNAV*TFRRQL
Trigger: GAGCTGCCGTCTGAAGGTCCACACAGCATTGACGGG...CAACCTACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTTACCAGGAAGGGGAATaGGAAGGAGCTCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: NECAHTTHCALHTQYSILYQEGE*EGAHSL
Trigger: GAGACTGTGAGCTCCTTCCCATTCCCCTTCCTGGTA...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCAATGTCTGCCCAGCAGTaGGGTTGCAGAAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSMSAQQ*GCRSSG
Trigger: TCCTGAACTTCTGCAACCCCACTGCTGGGCAGACAT...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp GACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTTGCTAGAATTCCATGTCGAACTTaGATGGTGCTTCGGCGATGG +
Preference number: 4 (lower is better)
Translates to: DLEEHNILETKGSASLARIPCRT*MVLRRW
Trigger: CCATCGCCGAAGCACCATTCAAGTTCGACATGGAAT...TCTAGCAAGGGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR TCA 90 bp CTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATGTTATGGTCAAAAGGTaGAGTGCAAATAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LQHQPRYFHKLLLWGNSYVMVKR*SANKGL
Trigger: CAGCCCCTTATTTGCACTTCACCTTTTGACCATAAC...ATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp CAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCAAATAAGGTATGACTTCTTGCTCTaGAAAAAGGGGTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QAPALGKQLWSKGEVQIRYDFLL*KKGLPR
Trigger: CCTGGGCAACCCCTTTTTTCAGAGCAAGAAGTCATA...CCTTATTTGCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp CTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTAGGTTGAGAATCTCTCTCTGGTaGGGCTGCATGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LHVMSSWRLYYKLLYCRLRISLW*GCMVSR
Trigger: CCTGCTGACCATGCAGCCGCACCAGAGAGAGATTCT...CAACCTACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTGACCATTTGCTCGATGGTTaGTGCTCGAATAATGTCATT +
Preference number: 4 (lower is better)
Translates to: KGSASLARAHCIKLQVPDHLLDG*CSNNVI
Trigger: AATGACATTATTCGAGCACCAACCATCGAGCAAATG...GTCAGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp GGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTGACAAAATTCAACATAATTTCTaGAGCCCTGTACCAACGTGT +
Preference number: 4 (lower is better)
Translates to: GSASLARAHCIKLQVPDKIQHNF*SPVPTC
Trigger: ACACGTTGGTACAGGGCTCCAGAAATTATGTTGAAT...TTTGTCAGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp CTAGAAACAAAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGATCTGTATCCTGGCTaGAATCTAGCAGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LETKGSASLARAHCIKLQDLYPG*NLAVSS
Trigger: TGAAGAGACTGCTAGATTCCAGCCAGGATACAGATC...CTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTTTGTTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp CTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTAGGTTGTCTGGTGCGGCTGCATaGTCAGCAGGGCATCATGTA +
Preference number: 4 (lower is better)
Translates to: LHVMSSWRLYYKLLYCRLSGAAA*SAGHHV
Trigger: TACATGATGCCCTGCTGACCATGCAGCCGCACCAGA...CAACCTACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTAACCTGGTGCAACCCTaGAGGACTTGCTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: NECAHTTHCALHTQYSILNLVQP*RTCSGF
Trigger: AAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCACTTTTTCTGACAGTCTaGCTCAGCAGTATCAGAAAT +
Preference number: 4 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPLFLTV*LSSIRN
Trigger: ATTTCTGATACTGCTGAGTCAGACTGTCAGAAAAAG...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp TATACTTTCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATGGGCTTGAGGTCACGGTaGAGAACGTTAGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: YTFSFKDAVFLSAKSSGMGLRSR*RTLAEW
Trigger: CCATTCAGCTAACGTTCTGCACCGTGACCTCAAGCC...CATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGAAAGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp TATACTTTCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATGATCATGGTCTGGATCTaGAACACGGGCCAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: YTFSFKDAVFLSAKSSGMIMVWI*NTGQAK
Trigger: TTTGGCCTGGCCCGTGTTGCAGATCCAGACCATGAT...CATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGAAAGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp CAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCAAATAAGGAGATGCCACAATGTCTaGGTATCTCTGCTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: QAPALGKQLWSKGEVQIRRCHNV*VSLLAL
Trigger: CAAAGCTAGCAGAGATACGCAGACATTGTGGCATCT...CCTTATTTGCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCATTTGGAGTCAGCATTTaGGAACAGCCTGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSFGVSI*EQPVPW
Trigger: CCATGGAACAGGCTGTTCCCAAATGCTGACTCCAAA...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ATAATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTTTGCTCCAGATATGGGTaGGCCAGAGCCTGTTCTACT +
Preference number: 4 (lower is better)
Translates to: IMDLEEHNILETKGSASLCSRYG*ARACST
Trigger: AGTAGAACAGGCTCTGGCCCACCCATATCTGGAGCA...AAGGGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR TCA 90 bp TATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCGTGACTACCATGATATaGGAAAAGACGTGGACAAGT +
Preference number: 4 (lower is better)
Translates to: YFHKLLLWGNSYGQKVKCVTTMI*EKTWTS
Trigger: ACTTGTCCACGTCTTTTCTCATATCATGGTAGTCAC...GCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp ACAGTGCTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTTCTGTTTTCCGAGGATaGGCCAGCTATCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TVLHVMSSWRLYYKLLYCSVFRG*ASYPSS
Trigger: TGAGGAAGGATAGCTGGCTCATCCTCGGAAAACAGA...ACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp CTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTAGGTTGGGTTTCATGCCAATCTaGCTCCACAGTACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LHVMSSWRLYYKLLYCRLGFMPI*LHSTRK
Trigger: CTTCCTGGTACTGTGGAGTCAGATTGGCATGAAACC...CAACCTACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp CTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATTTGCTCGATGGTTGGTaGTCGAATAATGTCATTGAT +
Preference number: 4 (lower is better)
Translates to: LQHQPRYFHKLLLWGNSYLLDGW*SNNVID
Trigger: ATCAATGACATTATTCGAGCACCAACCATCGAGCAA...ATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTCAACCCTGGAGGACTTaGTCTGGATTTCCATTTGTT +
Preference number: 4 (lower is better)
Translates to: NECAHTTHCALHTQYSILQPWRT*SGFPFV
Trigger: AACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTG...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTTGCTCAGACCAAATATCAATaGACTTGGTGTAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: MDLEEHNILETKGSASLAQTKYQ*TWCSPW
Trigger: CCAAGGGCTACACCAAGTCCATTGATATTTGGTCTG...AGCAAGGGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp CTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTAGGTTGATATGCACCAGCATGTaGAGTTCCACCCTGGGACAT +
Preference number: 4 (lower is better)
Translates to: LHVMSSWRLYYKLLYCRLICTSM*SSTLGH
Trigger: ATGTCCCAGGGTGGAACTCCACATGCTGGTGCATAT...CAACCTACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCACATGCAGAGCAAATCTaGAAGACATCTGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSHAEQI*KTSGEH
Trigger: ATGTTCCCCAGATGTCTTCCAGATTTGCTCTGCATG...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp ATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTTGCTTCCTCTTGTGTGGGTTaGATGTCAACATTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: MDLEEHNILETKGSASLASSCVG*MSTFCP
Trigger: TGGACAAAATGTTGACATTCAACCCACACAAGAGGA...AGCAAGGGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR TCA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTTTTCCTCTGAATGGCTaGAATATTACGTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: NECAHTTHCALHTQYSILFPLNG*NITWHV
Trigger: CACATGCCACGTAATATTTCAGCCATTCAGAGGAAA...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCAACACAAGTTACCACATaGAGAGCAAATCTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSTQVTT*RANLED
Trigger: GTCTTCCAGATTTGCTCTGCATGTGGTAACTTGTGT...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp TATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCATTCAACATAATTTCTaGAGCCCTGTACCAACGTGT +
Preference number: 4 (lower is better)
Translates to: YFHKLLLWGNSYGQKVKCIQHNF*SPVPTC
Trigger: ACACGTTGGTACAGGGCTCCAGAAATTATGTTGAAT...GCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp CTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATAAATATCAATGGACTTaGTGTAGCCCTTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: LQHQPRYFHKLLLWGNSYKYQWT*CSPWNS
Trigger: TGAATTCCAAGGGCTACACCAAGTCCATTGATATTT...ATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ATAATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTTTTTGGAGTCAGCATTTaGGAACAGCCTGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: IMDLEEHNILETKGSASLFGVSI*EQPVPW
Trigger: CCATGGAACAGGCTGTTCCCAAATGCTGACTCCAAA...AAGGGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp GACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTTGCTAGAATAAGTCCAGAGCTTTaGAGTCAGCATTTGGGAACA +
Preference number: 4 (lower is better)
Translates to: DLEEHNILETKGSASLARISPEL*SQHLGT
Trigger: TGTTCCCAAATGCTGACTCCAAAGCTCTGGACTTAT...TCTAGCAAGGGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCTGCTCCAGATATGGGTaGGCCAGAGCCTGTTCTACT +
Preference number: 4 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCCSRYG*ARACST
Trigger: AGTAGAACAGGCTCTGGCCCACCCATATCTGGAGCA...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ACAGTGCTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTCACAAGCTCCTGCTCTaGGGAAACAGTTATGGTCAA +
Preference number: 4 (lower is better)
Translates to: TVLHVMSSWRLYYKLLYCHKLLL*GNSYGQ
Trigger: TTGACCATAACTGTTTCCCCAGAGCAGGAGCTTGTG...ACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAGCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCACACGTCATGAGCTCCTaGAGGCTTTATTACAAATTG +
Preference number: 4 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSHVMSS*RLYYKL
Trigger: CAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTG...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCACTACTCGAACTTTGTTaGCATTATCATAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSLLELC*HYHKQS
Trigger: GCTCTGCTTATGATAATGTCAACAAAGTTCGAGTAG...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp TATACTTTCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATGAGAGAAAACCACTGGTaGGCTACATGTAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: YTFSFKDAVFLSAKSSGMRENHW*ATCSFS
Trigger: TGAGAAGCTACATGTAGCTCACCAGTGGTTTTCTCT...CATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGAAAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp GACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTTGCTAGATATACATCTTTCATTTaGTCGATGGTTGGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: DLEEHNILETKGSASLARYTSFI*SMVGAR
Trigger: TCGAGCACCAACCATCGAGCAAATGAAAGATGTATA...TCTAGCAAGGGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR GCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCAAAGTTAGTGGTTTCATaGCAATCTGACTCCACAGTA +
Preference number: 4 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSKLVVS*QSDSTV
Trigger: TACTGTGGAGTCAGATTGGCATGAAACCACTAACTT...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp CTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTAGGTTGCCACACACTGTGCACTaGACACACAATACAGTATTC +
Preference number: 4 (lower is better)
Translates to: LHVMSSWRLYYKLLYCRLPHTVH*THNTVF
Trigger: GAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGG...CAACCTACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp TATACTTTCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATGGATCTGTATCCTGGCTaGAATCTAGCAGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: YTFSFKDAVFLSAKSSGMDLYPG*NLAVSS
Trigger: TGAAGAGACTGCTAGATTCCAGCCAGGATACAGATC...CATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGAAAGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCAGCATTTTCTAAAAGCTaGGCCAATAGCACATACCTT +
Preference number: 4 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSAFSKS*ANSTYL
Trigger: AAGGTATGTGCTATTGGCCCAGCTTTTAGAAAATGC...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTTACGTGGCATGTGGTTaGGTAGTTTACTTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: NECAHTTHCALHTQYSILYVACG*VVYFCD
Trigger: ATCACAAAAGTAAACTACCCAACCACATGCCACGTA...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp CAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCAAATAAGGATATTACGTGGCATGTaGTTGGGTAGTTTACTTTTG +
Preference number: 4 (lower is better)
Translates to: QAPALGKQLWSKGEVQIRILRGM*LGSLLL
Trigger: CAAAAGTAAACTACCCAACCACATGCCACGTAATAT...CCTTATTTGCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTACAGTTTCCTCTGAATaGCTGAAATATTACGTGGCA +
Preference number: 4 (lower is better)
Translates to: NECAHTTHCALHTQYSILTVSSE*LKYYVA
Trigger: TGCCACGTAATATTTCAGCCATTCAGAGGAAACTGT...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp ACAGTGCTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTATTCTTCTACCCAGATaGCACAATGTCTGCGTATCT +
Preference number: 4 (lower is better)
Translates to: TVLHVMSSWRLYYKLLYCILLPR*HNVCVS
Trigger: AGATACGCAGACATTGTGGCATCTGGGTAGAAGAAT...ACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAGCACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp TATACTTTCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATGCAGAACTTTCTTGAGTaGTCTACACGCATAAACAGC +
Preference number: 4 (lower is better)
Translates to: YTFSFKDAVFLSAKSSGMQNFLE*STRINS
Trigger: GCTGTTTATGCGTGTAGAGCACTCAAGAAAGTTCTG...CATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGAAAGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ACAGTGCTTCACGTCATGAGCTCCTGGAGGCTTTATTACAAATTGTTATACTGTATAAGTCCAGAGCTTTaGAGTCAGCATTTGGGAACA +
Preference number: 4 (lower is better)
Translates to: TVLHVMSSWRLYYKLLYCISPEL*SQHLGT
Trigger: TGTTCCCAAATGCTGACTCCAAAGCTCTGGACTTAT...ACAGTATAACAATTTGTAATAAAGCCTCCAGGAGCTCATGACGTGAAGCACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTATCTATGCAGAATTTTaGGGTACAATACCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: NECAHTTHCALHTQYSILIYAEF*GTIPRR
Trigger: CCTTCTTGGTATTGTACCCCAAAATTCTGCATAGAT...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR TCA 90 bp TATACTTTCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATGAGGACAGAGTCCTCATaGTTAGTTCTTTCAATTCCA +
Preference number: 4 (lower is better)
Translates to: YTFSFKDAVFLSAKSSGMRTESS*LVLSIP
Trigger: TGGAATTGAAAGAACTAATCATGAGGACTCTGTCCT...CATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGAAAGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCACAGTAAGCAGTAGGTaGACTGAAGTACATACTGCC +
Preference number: 4 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCTVSSR*TEVHTA
Trigger: GGCAGTATGTACTTCAGTGCACCTACTGCTTACTGT...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCAACTATACATGCACGGTaGTGTGTTATTTTGGTAATA +
Preference number: 4 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSTIHAR*CVILVI
Trigger: TATTACCAAAATAACACAGCACCGTGCATGTATAGT...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp TATACTTTCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATGCATTTGCTCGATGGTTaGTGCTCGAATAATGTCATT +
Preference number: 4 (lower is better)
Translates to: YTFSFKDAVFLSAKSSGMHLLDG*CSNNVI
Trigger: AATGACATTATTCGAGCACCAACCATCGAGCAAATG...CATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGAAAGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCAAGAACGTTAGCTGAATaGATATATTTTAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSRTLAE*IYFNPL
Trigger: CAGAGGGTTAAAATATATCCATTCAGCTAACGTTCT...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AAAATAATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCAAGATAATGCTTCCCTaGAAAGATGGGCCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: KIMDLEEHNILETKGSASKIMLP*KDGPVR
Trigger: TCTAACAGGCCCATCTTTCCAGGGAAGCATTATCTT...GGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp AAAATAATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCTTAAGATCTGTATCCTaGCTGGAATCTAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: KIMDLEEHNILETKGSASLRSVS*LESSSL
Trigger: GAGACTGCTAGATTCCAGCCAGGATACAGATCTTAA...GGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR TCA 90 bp AAAATAATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTACTCGAACTTTGTTaGCATTATCATAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: KIMDLEEHNILETKGSASLLELC*HYHKQS
Trigger: GCTCTGCTTATGATAATGTCAACAAAGTTCGAGTAG...GGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR TCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCATTTCCATTTGTTTCTaGCCCATCATGTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCISICF*PIMSRW
Trigger: CCACCTTGACATGATGGGTCAGAAACAAATGGAAAT...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCTTGGACAGTCATCTCTaGACAGAAAGCTGTAACAGT +
Preference number: 4 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCLDSHL*TESCNS
Trigger: ACTGTTACAGCTTTCTGTGCAGAGATGACTGTCCAA...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR GCA 90 bp AAGCACACAACTTATGGCTACAATGATTCTAGAATGAAGTTAGTGGTTTCATGCGTTAGGACCATTCTCTaGCCAGTTACATTATGTTTG +
Preference number: 4 (lower is better)
Translates to: KHTTYGYNDSRMKLVVSCVRTIL*PVTLCL
Trigger: CAAACATAATGTAACTGGGCAGAGAATGGTCCTAAC...GCATGAAACCACTAACTTCATTCTAGAATCATTGTAGCCATAAGTTGTGTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CCA 90 bp AAAATAATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCAAATATCAATGGACTTaGTGTAGCCCTTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: KIMDLEEHNILETKGSASKYQWT*CSPWNS
Trigger: TGAATTCCAAGGGCTACACCAAGTCCATTGATATTT...GGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CCA 90 bp ATAATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTTTTCAATCCTCTTGTGTaGGTTGAATGTCAACATTTT +
Preference number: 4 (lower is better)
Translates to: IMDLEEHNILETKGSASLFNPLV*VECQHF
Trigger: AAAATGTTGACATTCAACCCACACAAGAGGATTGAA...AAGGGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS GCA 90 bp ACGCCGAGCGGGAGAGCTGAAGAGCCGACAGCCACTCGGACCGATTaGCTGCCTGCCTGCCAGACTGACGGGCGGGCCGGCGGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: TPSGRAEEPTATRTD*LPACQTDGRAGGRA
Trigger: CGCCCGCCCGCCGGCCCGCCCGTCAGTCTGGCAGGCAGGCAGGCAATCGGTCCGAGTGGCTGTCGGCTCTTCAGCTCTCCCGCTCGGCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS TCA 90 bp CCGACGCTGACCGGGAGGAGGAAGGAAGACGCCGAGCGGGAGAGCTaGAGAGCCGACAGCCACTCGGACCGATTGCCTGCCTGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: PTLTGRRKEDAERES*RADSHSDRLPACLP
Trigger: TGGCAGGCAGGCAGGCAATCGGTCCGAGTGGCTGTCGGCTCTTCAGCTCTCCCGCTCGGCGTCTTCCTTCCTCCTCCCGGTCAGCGTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215832.11
ENST00000398822.7
CDS-3UTR CAA 90 bp TATCCTTCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGGTCATTGCTGAGGTGTaGTGTCTTCAAGAGCTTGTA +
Preference number: 5 (lower is better)
Translates to: YPSSATGVVSVSTLGWVVVIAEV*CLQELV
Trigger: TACAAGCTCTTGAAGACACAACACCTCAGCAATGAC...CACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGAAGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp TATCCTTCCTCAGCCACAGGAGTGGTGAGCGTGAGCACCCTGGGCTGGGTGGTGCTTTTCATAGGTACCTaGGTTAGGACCATTCTCTGC +
Preference number: 5 (lower is better)
Translates to: YPSSATGVVSVSTLGWVVLFIGT*VRTILC
Trigger: GCAGAGAATGGTCCTAACCAAGGTACCTATGAAAAG...CACCACCCAGCCCAGGGTGCTCACGCTCACCACTCCTGTGGCTGAGGAAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp GCTGTGCCCAGCAGCACCTCTGGGGCACAAGGGCAGGCCCTCTTTAGAGAGAACTCTACTTCAATCCTCTaGTGTGGGTTGAATGTCAAC +
Preference number: 5 (lower is better)
Translates to: AVPSSTSGAQGQALFRENSTSIL*CGLNVN
Trigger: GTTGACATTCAACCCACACAAGAGGATTGAAGTAGA...GTTCTCTCTAAAGAGGGCCTGCCCTTGTGCCCCAGAGGTGCTGCTGGGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp GGAAGTCAAGAGGAGGCACCGCACTGGGACAGAACACCGAGTCAACTCCACAGTGTATCTCTGCTAGCTTaGAGGACCTGTGTCAGGACA +
Preference number: 5 (lower is better)
Translates to: GSQEEAPHWDRTPSQLHSVSLLA*RTCVRT
Trigger: TGTCCTGACACAGGTCCTCAAAGCTAGCAGAGATAC...ACTGTGGAGTTGACTCGGTGTTCTGTCCCAGTGCGGTGCCTCCTCTTGACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp GCTGTGCCCAGCAGCACCTCTGGGGCACAAGGGCAGGCCCTCTTTAGAGAGAACGAAATATTTGAGTACTaGAGGACAGAACAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: AVPSSTSGAQGQALFRENEIFEY*RTEQCF
Trigger: GAAGCACTGTTCTGTCCTCAAGTACTCAAATATTTC...GTTCTCTCTAAAGAGGGCCTGCCCTTGTGCCCCAGAGGTGCTGCTGGGCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCATGCCCAGCAGTGGGGTaGCAGAAGTTCAGGAGGATG +
Preference number: 5 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPCPAVG*QKFRRM
Trigger: CATCCTCCTGAACTTCTGCAACCCCACTGCTGGGCA...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp CTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATCGGAGACGGAAGCACTaGCTGCAGGCTGCAACATCA +
Preference number: 5 (lower is better)
Translates to: LQHQPRYFHKLLLWGNSYRRRKH*LQAATS
Trigger: TGATGTTGCAGCCTGCAGCAAGTGCTTCCGTCTCCG...ATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp ACAAAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTAAGGCAGCGCCTCCCTaGCTAGAGCTCACTGTATTA +
Preference number: 5 (lower is better)
Translates to: TKGSASLARAHCIKLQVPKAAPP*LELTVL
Trigger: TAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTT...AGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CAA 90 bp AAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTGACAATTCCATGTCGAACTaGAATGGTGCTTCGGCGATG +
Preference number: 5 (lower is better)
Translates to: KGSASLARAHCIKLQVPDNSMSN*NGASAM
Trigger: CATCGCCGAAGCACCATTCAAGTTCGACATGGAATT...GTCAGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CAA 90 bp TTGCTGCAGGCTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGCATGGCACCTTATTTTaGTGTGGAAGAGAAAGCAAA +
Preference number: 5 (lower is better)
Translates to: LLQAATSAKVFPQAPALGHGTLF*CGRESK
Trigger: TTTGCTTTCTCTTCCACACAAAAATAAGGTGCCATG...CCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAGCCTGCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp CAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCAAATAAGGGTAGGCATGTGGCACTaGGACAGTCATCTCTGCACA +
Preference number: 5 (lower is better)
Translates to: QAPALGKQLWSKGEVQIRVGMWH*DSHLCT
Trigger: TGTGCAGAGATGACTGTCCAAGTGCCACATGCCTAC...CCTTATTTGCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp GGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTGACAAAAAGGGGCTGATTTTCTaGATAGCTACTCGAACTTTG +
Preference number: 5 (lower is better)
Translates to: GSASLARAHCIKLQVPDKKGLIF*IATRTL
Trigger: CAAAGTTCGAGTAGCTATCAAGAAAATCAGCCCCTT...TTTGTCAGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CAA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCAAATAAGTCCAGAGCTTaGGAGTCAGCATTTGGGAAC +
Preference number: 5 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPNKSRA*ESAFGN
Trigger: GTTCCCAAATGCTGACTCCAAAGCTCTGGACTTATT...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp AAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTGACTCTACTTCAATCCTCTaGTGTGGGTTGAATGTCAAC +
Preference number: 5 (lower is better)
Translates to: KGSASLARAHCIKLQVPDSTSIL*CGLNVN
Trigger: GTTGACATTCAACCCACACAAGAGGATTGAAGTAGA...GTCAGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CAA 90 bp CAAGCTCCTGCTCTGGGGAAACAGTTATGGTCAAAAGGTGAAGTGCAAATAAGGGCAACCCTGGAGGACTaGCTCTGGATTTCCATTTGT +
Preference number: 5 (lower is better)
Translates to: QAPALGKQLWSKGEVQIRATLED*LWISIC
Trigger: ACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGC...CCTTATTTGCACTTCACCTTTTGACCATAACTGTTTCCCCAGAGCAGGAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp ACAAAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTATATACATCTTTCATTaGCTCGATGGTTGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: TKGSASLARAHCIKLQVPIYIFH*LDGWCS
Trigger: CGAGCACCAACCATCGAGCAAATGAAAGATGTATAT...AGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CAA 90 bp CTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATGATGTCGGGGCTTCTTaGTTAGGGTTTGACAGAATA +
Preference number: 5 (lower is better)
Translates to: LQHQPRYFHKLLLWGNSYDVGAS*LGFDRI
Trigger: TATTCTGTCAAACCCTAACAAAGAAGCCCCGACATC...ATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTCCAAAGTCACAGATCTaGAGATCACAGGTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: NECAHTTHCALHTQYSILPKSQI*RSQVVL
Trigger: CAACACCACCTGTGATCTCAAGATCTGTGACTTTGG...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp ATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCCTTGCTCCAAAGTCACAGATCTaGAGATCACAGGTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: MDLEEHNILETKGSASLAPKSQI*RSQVVL
Trigger: CAACACCACCTGTGATCTCAAGATCTGTGACTTTGG...AGCAAGGGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CAA 90 bp ACAAAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTCATGGCACCTTATTTTaGTGTGGAAGAGAAAGCAAA +
Preference number: 5 (lower is better)
Translates to: TKGSASLARAHCIKLQVPHGTLF*CGRESK
Trigger: TTTGCTTTCTCTTCCACACAAAAATAAGGTGCCATG...AGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CAA 90 bp AAAGGCAGCGCCTCCCTTGCTAGAGCTCACTGTATTAAACTCCAGGTACCTGACTTGAATGTCAACATTTaGTCCAATAAGTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: KGSASLARAHCIKLQVPDLNVNI*SNKSRA
Trigger: AGCTCTGGACTTATTGGACAAAATGTTGACATTCAA...GTCAGGTACCTGGAGTTTAATACAGTGAGCTCTAGCAAGGGAGGCGCTGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS-3UTR CAA 90 bp AATGAGTGTGCACACACCACACACTGTGCACTGCACACACAATACAGTATTCTTAATTCCATGTCGAACTaGAATGGTGCTTCGGCGATG +
Preference number: 5 (lower is better)
Translates to: NECAHTTHCALHTQYSILNSMSN*NGASAM
Trigger: CATCGCCGAAGCACCATTCAAGTTCGACATGGAATT...AAGAATACTGTATTGTGTGTGCAGTGCACAGTGTGTGGTGTGTGCACACTCATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp AACCTGGTGCAACCCTGGAGGACTTGCTCTGGATTTCCATTTGTTTCTGACCCAAATCTATGCAGAATTTaGGGGTACAATACCAAGAAG +
Preference number: 5 (lower is better)
Translates to: NLVQPWRTCSGFPFVSDPNLCRI*GYNTKK
Trigger: CTTCTTGGTATTGTACCCCAAAATTCTGCATAGATT...TGGGTCAGAAACAAATGGAAATCCAGAGCAAGTCCTCCAGGGTTGCACCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCAAAGGGGCTGATTTTCTaGATAGCTACTCGAACTTTG +
Preference number: 5 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSKGLIF*IATRTL
Trigger: CAAAGTTCGAGTAGCTATCAAGAAAATCAGCCCCTT...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp CTGCAACATCAGCCAAGGTATTTCCACAAGCTCCTGCTCTGGGGAAACAGTTATTTGAATGTCAACATTTaGTCCAATAAGTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: LQHQPRYFHKLLLWGNSYLNVNI*SNKSRA
Trigger: AGCTCTGGACTTATTGGACAAAATGTTGACATTCAA...ATAACTGTTTCCCCAGAGCAGGAGCTTGTGGAAATACCTTGGCTGATGTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp ATTCTCTGCCGAGCAGAGGTAAAAAGGACCCTACAGAAGTACCTTTCTAACTCACGGTGCTGTGTTATTTaGGTAATACAGGGACACAAT +
Preference number: 5 (lower is better)
Translates to: ILCRAEVKRTLQKYLSNSRCCVI*VIQGHN
Trigger: ATTGTGTCCCTGTATTACCAAAATAACACAGCACCG...TGAGTTAGAAAGGTACTTCTGTAGGGTCCTTTTTACCTCTGCTCGGCAGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp TATACTTTCTCATTTAAAGACGCAGTGTTCCTCTCTGCTAAATCCTCAGGCATGATATACATCTTTCATTaGCTCGATGGTTGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: YTFSFKDAVFLSAKSSGMIYIFH*LDGWCS
Trigger: CGAGCACCAACCATCGAGCAAATGAAAGATGTATAT...CATGCCTGAGGATTTAGCAGAGAGGAACACTGCGTCTTTAAATGAGAAAGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215832.11
CDS-3UTR CAA 90 bp AAAATAATGGACCTTGAGGAACATAATATTCTAGAAACAAAAGGCAGCGCCTCCAATAAGTCCAGAGCTTaGGAGTCAGCATTTGGGAAC +
Preference number: 5 (lower is better)
Translates to: KIMDLEEHNILETKGSASNKSRA*ESAFGN
Trigger: GTTCCCAAATGCTGACTCCAAAGCTCTGGACTTATT...GGAGGCGCTGCCTTTTGTTTCTAGAATATTATGTTCCTCAAGGTCCATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS GCA 90 bp GAGGTCCTGTACTATATATACATCTTTCATTTGCTCGATGGTTGGTaGTCGAATAATGTCATTGATTCCAATGATGTTCTCATGTCTGAA +
Preference number: 5 (lower is better)
Translates to: EVLYYIYIFHLLDGW*SNNVIDSNDVLMSE
Trigger: TTCAGACATGAGAACATCATTGGAATCAATGACATTATTCGAGCACCAACCATCGAGCAAATGAAAGATGTATATATAGTACAGGACCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215832.11
ENST00000398822.7
ENST00000544786.1
CDS GCA 72 bp CCGCCGCTCAGCTCTTGTCGCCCCTCCCGCAGGGACTaGGCCGCCGCCGGTGCAGCCGCCGACGCTGACCGG +
Preference number: 6 (lower is better)
Translates to: PPLSSCRPSRRD*AAAGAAADADR
Trigger: CCGGTCAGCGTCGGCGGCTGCACCGGCGGCGGCGCAGTCCCTGCGGGAGGGGCGACAAGAGCTGAGCGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215832.11
ENST00000398822.7
CDS TCA 72 bp AGCCACTCGGACCGATTGCCTGCCTGCCTGCCAGACTaGCGGGCGGGCCGGCGGGCGGGCGGAGGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: SHSDRLPACLPD*RAGRRAGGGRG
Trigger: GCCCCTCCCTCCGCCCGCCCGCCGGCCCGCCCGTCAGTCTGGCAGGCAGGCAGGCAATCGGTCCGAGTGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS GCA 72 bp GAGCCGACAGCCACTCGGACCGATTGCCTGCCTGCCTaGCAGACTGACGGGCGGGCCGGCGGGCGGGCGGAG +
Preference number: 6 (lower is better)
Translates to: EPTATRTDCLPA*QTDGRAGGRAE
Trigger: CTCCGCCCGCCCGCCGGCCCGCCCGTCAGTCTGGCAGGCAGGCAGGCAATCGGTCCGAGTGGCTGTCGGCTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398822.7
CDS TCA 72 bp ACCGGGAGGAGGAAGGAAGACGCCGAGCGGGAGAGCTaGAGAGCCGACAGCCACTCGGACCGATTGCCTGCC +
Preference number: 6 (lower is better)
Translates to: TGRRKEDAERES*RADSHSDRLPA
Trigger: GGCAGGCAATCGGTCCGAGTGGCTGTCGGCTCTTCAGCTCTCCCGCTCGGCGTCTTCCTTCCTCCTCCCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215832.11
ENST00000398822.7
CDS CCA 72 bp CTTAGGCAAGTCATCCAATTCCATGTCGAACTTGAATaGTGCTTCGGCGATGGGCTCGTCACTCGGGTCGTA +
Preference number: 6 (lower is better)
Translates to: LRQVIQFHVELE*CFGDGLVTRVV
Trigger: TACGACCCGAGTGACGAGCCCATCGCCGAAGCACCATTCAAGTTCGACATGGAATTGGATGACTTGCCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215832.11
ENST00000398822.7
ENST00000544786.1
CDS GCA 72 bp AGGCAAGTCATCCAATTCCATGTCGAACTTGAATGGTaGTTCGGCGATGGGCTCGTCACTCGGGTCGTAATA +
Preference number: 6 (lower is better)
Translates to: RQVIQFHVELEW*FGDGLVTRVVI
Trigger: TATTACGACCCGAGTGACGAGCCCATCGCCGAAGCACCATTCAAGTTCGACATGGAATTGGATGACTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215832.11
ENST00000398822.7
ENST00000544786.1
CDS CAA 72 bp TTTTCCTTAGGCAAGTCATCCAATTCCATGTCGAACTaGAATGGTGCTTCGGCGATGGGCTCGTCACTCGGG +
Preference number: 6 (lower is better)
Translates to: FSLGKSSNSMSN*NGASAMGSSLG
Trigger: CCCGAGTGACGAGCCCATCGCCGAAGCACCATTCAAGTTCGACATGGAATTGGATGACTTGCCTAAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215832.11
ENST00000398822.7
ENST00000544786.1
CDS CCA 72 bp CAAAATGTGGTTCAGCTGGTCAAGATAATGCTTCCCTaGAAAGATGGGCCTGTTAGAAAGCATTTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: QNVVQLVKIMLP*KDGPVRKHFCQ
Trigger: CTGGCAGAAATGCTTTCTAACAGGCCCATCTTTCCAGGGAAGCATTATCTTGACCAGCTGAACCACATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215832.11
ENST00000398822.7
ENST00000544786.1
CDS CAA 72 bp GCCAGAGCCTGTTCTACTTCAATCCTCTTGTGTGGGTaGAATGTCAACATTTTGTCCAATAAGTCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: ARACSTSILLCG*NVNILSNKSRA
Trigger: GGCTCTGGACTTATTGGACAAAATGTTGACATTCAACCCACACAAGAGGATTGAAGTAGAACAGGCTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544786.1
CDS TCA 72 bp CCAGAGCCTGTTCTACTTCAATCCTCTTGTGTGGGTTaGATGTCAACATTTTGTCCAATAAGTCCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: PEPVLLQSSCVG*MSTFCPISPEP
Trigger: TGGCTCTGGACTTATTGGACAAAATGTTGACATTCAACCCACACAAGAGGATTGAAGTAGAACAGGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544786.1
CDS CAA 72 bp GCCAGAGCCTGTTCTACTTCAATCCTCTTGTGTGGGTaGAATGTCAACATTTTGTCCAATAAGTCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: ARACSTSILLCG*NVNILSNKSRA
Trigger: AGCTCTGGACTTATTGGACAAAATGTTGACATTCAACCCACACAAGAGGATTGAAGTAGAACAGGCTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215832.11
ENST00000398822.7
CDS TCA 72 bp CCAGAGCCTGTTCTACTTCAATCCTCTTGTGTGGGTTaGATGTCAACATTTTGTCCAATAAGTCCAGAGCTT +
Preference number: 6 (lower is better)
Translates to: PEPVLLQSSCVG*MSTFCPISPEL
Trigger: AAGCTCTGGACTTATTGGACAAAATGTTGACATTCAACCCACACAAGAGGATTGAAGTAGAACAGGCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215832.11
ENST00000398822.7
CDS CAA 72 bp TTTTCCTTAGGCAAGTCATCCAATTCCATGTCGAACTaGAATGGTGCTTCGGCGATGGGCTTTAAAAGAAAA +
Preference number: 6 (lower is better)
Translates to: FSLGKSSNSMSN*NGASAMGFKRK
Trigger: TTTTCTTTTAAAGCCCATCGCCGAAGCACCATTCAAGTTCGACATGGAATTGGATGACTTGCCTAAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491588.1
CDS CAA 72 bp ACTTCAATCCTCTTGTGTGGGTTGAATGTCAACATTTaGTCCAATAAGTCCAGAGCTTTGGAGTCAGCATTT +
Preference number: 6 (lower is better)
Translates to: TSILLCGLNVNI*SNKSRALESAF
Trigger: AAATGCTGACTCCAAAGCTCTGGACTTATTGGACAAAATGTTGACATTCAACCCACACAAGAGGATTGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215832.11
ENST00000398822.7