RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP7D2 (Homo sapiens)

Ensembl gene IDs: ENSG00000184368

Ensembl transcript IDs: ENST00000379643.10, ENST00000379651.7, ENST00000443379.7, ENST00000452324.3, ENST00000466145.1

Found 516 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGCGAGACATAGGATTCATTCAGCTGGAAAGCCACTCCATGGTCTaGAGTGACTACAGCATGAAGATTTTAAGGTGTGACACGAAAGAG +
Preference number: 1 (lower is better)
Translates to: TRDIGFIQLESHSMV*SDYSMKILRCDTKE
Trigger: CTCTTTCGTGTCACACCTTAAAATCTTCATGCTGTAGTCACTCCAGACCATGGAGTGGCTTTCCAGCTGAATGAATCCTATGTCTCGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CCA 90 bp TTCTGTGTGCCTGTCATAAAGGGACTTGGCCAGTATTTGCCGAGATaGACAGCACCGCATTATGTGGAGGCATGTACTTTATTGAGTAGA +
Preference number: 1 (lower is better)
Translates to: FCVPVIKGLGQYLPR*TAPHYVEACTLLSR
Trigger: TCTACTCAATAAAGTACATGCCTCCACATAATGCGGTGCTGTCCATCTCGGCAAATACTGGCCAAGTCCCTTTATGACAGGCACACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR TCA 90 bp GGTAAGGGTGACAGAAGCTTCTTCAAGCAGCTAGTAGCTCGGATTTaGCTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAA +
Preference number: 1 (lower is better)
Translates to: GKGDRSFFKQLVARI*LSAALRVLQTPFIK
Trigger: TTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAGCTTCTGTCACCCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR CCA 90 bp ACACAAGGTACATATCATGCAAATGAGGCATCACCATGGTCACAATaGTGCTGTGAGGTACAACAAATCACAAGAAAACAGACATTTAGC +
Preference number: 1 (lower is better)
Translates to: TQGTYHANEASPWSQ*CCEVQQITRKQTFS
Trigger: GCTAAATGTCTGTTTTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCATGGTGATGCCTCATTTGCATGATATGTACCTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR GCA 90 bp TTTATGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTaGCGAGCCAGTCACTCAGGTTATTCAGAGGGTCACTATGATAAT +
Preference number: 1 (lower is better)
Translates to: FMCSNFGNKNGYKAN*RASHSGYSEGHYDN
Trigger: ATTATCATAGTGACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR GCA 90 bp CAAGGTACATATCATGCAAATGAGGCATCACCATGGTCACAATGGTaGTGTGAGGTACAACAAATCACAAGAAAACAGACATTTAGCAAA +
Preference number: 1 (lower is better)
Translates to: QGTYHANEASPWSQW*CEVQQITRKQTFSK
Trigger: TTTGCTAAATGTCTGTTTTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCATGGTGATGCCTCATTTGCATGATATGTACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CCA 90 bp TCCTTCCTCAACCAAACTTACTACTTTAACCCCAGAAGAATAATGTaGGGCAATGCATTTCTGCAGGTGGCAAAGCTTAACAACAATTTT +
Preference number: 1 (lower is better)
Translates to: SFLNQTYYFNPRRIM*GNAFLQVAKLNNNF
Trigger: AAAATTGTTGTTAAGCTTTGCCACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTAAGTTTGGTTGAGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR TCA 90 bp TCTGTAACTAATACATTCTTAAATGTAGCTGGCTGTAAAAGCACATaGACAAGATTACTACTGAGACTTCTTTGTATCTCCTGGTTGCAA +
Preference number: 1 (lower is better)
Translates to: SVTNTFLNVAGCKST*TRLLLRLLCISWLQ
Trigger: TTGCAACCAGGAGATACAAAGAAGTCTCAGTAGTAATCTTGTTCATGTGCTTTTACAGCCAGCTACATTTAAGAATGTATTAGTTACAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CAA 90 bp TGCTATGGTTTCTGTGTGCCTGTCATAAAGGGACTTGGCCAGTATTaGCCGAGATGGACAGCACCGCATTATGTGGAGGCATGTACTTTA +
Preference number: 2 (lower is better)
Translates to: CYGFCVPVIKGLGQY*PRWTAPHYVEACTL
Trigger: TAAAGTACATGCCTCCACATAATGCGGTGCTGTCCATCTCGGCAAATACTGGCCAAGTCCCTTTATGACAGGCACACAGAAACCATAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR-3UTR TCA 90 bp GCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTCTAGTAGCTCGGATTTaGCTATCAGCAGCTTTACGG +
Preference number: 2 (lower is better)
Translates to: AKAQQGESFKVSTKSGQCLVARI*LSAALR
Trigger: CCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAG...ACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR-3UTR TCA 90 bp TACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGGCACTAGTAGCTCGGATTTaGCTATCAGCAGCTTTACGG +
Preference number: 2 (lower is better)
Translates to: YYFNPRRIMWGNAFLQVALVARI*LSAALR
Trigger: CCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAG...TGCCACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR-3UTR GCA 90 bp GCCAGTATTTGCCGAGATGGACAGCACCGCATTATGTGGAGGCATGTACTTTATAATAATGTGGGGCAATaGATTTCTGCAGGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: ASICRDGQHRIMWRHVLYNNVGQ*ISAGGK
Trigger: TTTGCCACCTGCAGAAATGCATTGCCCCACATTATT...ATAAAGTACATGCCTCCACATAATGCGGTGCTGTCCATCTCGGCAAATACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR-3UTR CCA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCTCCGAGCTAATAATTTaGGATCCAGCGGTAAGGGTG +
Preference number: 2 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVSELII*DPAVRV
Trigger: CACCCTTACCGCTGGATCCCAAATTATTAGCTCGGA...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR-3UTR TCA 90 bp GAATGCTATGGTTTTTGTTTGCGCCTGGTTTTATTAAAGCTGGGCAAACACAGGCTAGTAGCTCGGATTTaGCTATCAGCAGCTTTACGG +
Preference number: 2 (lower is better)
Translates to: ECYGFCLRLVLLKLGKHRLVARI*LSAALR
Trigger: CCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAG...CCTGTGTTTGCCCAGCTTTAATAAAACCAGGCGCAAACAAAAACCATAGCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR-3UTR TCA 90 bp TCCAATGTGGGCCCCCTATTGTTTCAGAATGCTATGGTTTTTGTTTGCGCCTGGTTTTTAAAGGCTTCTTaGTACTGCTTTCCAACAGAG +
Preference number: 2 (lower is better)
Translates to: SNVGPLLFQNAMVFVCAWFLKAS*YCFPTE
Trigger: CTCTGTTGGAAAGCAGTATCAAGAAGCCTTTAAAAA...CCAGGCGCAAACAAAAACCATAGCATTCTGAAACAATAGGGGGCCCACATTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR-3UTR TCA 90 bp CTATGGTTTCTGTGTGCCTGTCATAAAGGGACTTGGCCAGTATTTGCCGAGATGGAACAAGATTACTACTaGGACTTCTTTGTATCTCCT +
Preference number: 2 (lower is better)
Translates to: LWFLCACHKGTWPVFAEMEQDYY*DFFVSP
Trigger: AGGAGATACAAAGAAGTCTCAGTAGTAATCTTGTTC...CATCTCGGCAAATACTGGCCAAGTCCCTTTATGACAGGCACACAGAAACCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CAA 90 bp TTTGACATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTaGGGATCCAGCGGTAAGGGTGACAGAAGCTTCTTCAAGCAGCTA +
Preference number: 2 (lower is better)
Translates to: FDILPRNTVTFRANN*GSSGKGDRSFFKQL
Trigger: TAGCTGCTTGAAGAAGCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTATGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR-3UTR TCA 90 bp ATGAAGATTTTAAGGTGTGACACGAAAGAGTCCTTGCTAGATTCAGTTGCCCATAGATGGGGAACCTCCTaGATTTCTTCTCTGTCTCAA +
Preference number: 2 (lower is better)
Translates to: MKILRCDTKESLLDSVAHRWGTS*ISSLSQ
Trigger: TTGAGACAGAGAAGAAATTCAGGAGGTTCCCCATCT...ATGGGCAACTGAATCTAGCAAGGACTCTTTCGTGTCACACCTTAAAATCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR-3UTR CCA 90 bp ATGAGGCATCACCATGGTCACAATGGTGCTGTGAGGTACAACAAATCACAAGAAATGCATTTCTGCAGGTaGCAAAGCTTAACAACAATT +
Preference number: 2 (lower is better)
Translates to: MRHHHGHNGAVRYNKSQEMHFCR*QSLTTI
Trigger: AATTGTTGTTAAGCTTTGCCACCTGCAGAAATGCAT...TTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCATGGTGATGCCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CAA 90 bp CAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTaGACATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATT +
Preference number: 2 (lower is better)
Translates to: QQGESFKVSTKSGQC*TYYLGIQLHSELII
Trigger: AATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR CAA 90 bp AGTGACTACAGCATGAAGATTTTAAGGTGTGACACGAAAGAGTCCTaGCTAGATTCAGTTGCCCATGTATACACGAATATGCATAAGAGA +
Preference number: 2 (lower is better)
Translates to: SDYSMKILRCDTKES*LDSVAHVYTNMHKR
Trigger: TCTCTTATGCATATTCGTGTATACATGGGCAACTGAATCTAGCAAGGACTCTTTCGTGTCACACCTTAAAATCTTCATGCTGTAGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR-3UTR GCA 90 bp TGGTCACAATGGTGCTGTGAGGTACAACAAATCACAAGAAAACAGACATTTAGCCCTATTGTTTCAGAATaGTATGGTTTTTGTTTGCGC +
Preference number: 2 (lower is better)
Translates to: WSQWCCEVQQITRKQTFSPIVSE*YGFCLR
Trigger: GCGCAAACAAAAACCATAGCATTCTGAAACAATAGG...GCTAAATGTCTGTTTTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CAA 90 bp TATACACGAATATGCATAAGAGAACAGAAATCATTACTGACTGTTTaGACTTCCTTCCTCAACCAAACTTACTACTTTAACCCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: YTRICIREQKSLLTV*TSFLNQTYYFNPRR
Trigger: TCTTCTGGGGTTAAAGTAGTAAGTTTGGTTGAGGAAGGAAGTCAAAACAGTCAGTAATGATTTCTGTTCTCTTATGCATATTCGTGTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CCA 72 bp CCTGTCATAAAGGGACTTGGCCAGTATTTGCCGAGATaGACAGCACCGCATTATGTGGAGGCATGTACTTTA +
Preference number: 3 (lower is better)
Translates to: PVIKGLGQYLPR*TAPHYVEACTL
Trigger: TAAAGTACATGCCTCCACATAATGCGGTGCTGTCCATCTCGGCAAATACTGGCCAAGTCCCTTTATGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CCA 72 bp ATGCTATGGTTTCTGTGTGCCTGTCATAAAGGGACTTaGCCAGTATTTGCCGAGATGGACAGCACCGCATTA +
Preference number: 3 (lower is better)
Translates to: MLWFLCACHKGT*PVFAEMDSTAL
Trigger: TAATGCGGTGCTGTCCATCTCGGCAAATACTGGCCAAGTCCCTTTATGACAGGCACACAGAAACCATAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR-3UTR CAA 90 bp TGGTCACAATGGTGCTGTGAGGTACAACAAATCACAAGAAAACAGACATTTAGCGGACTTGGCCAGTATTaGCCGAGATGGACAGCACCG +
Preference number: 3 (lower is better)
Translates to: WSQWCCEVQQITRKQTFSGLGQY*PRWTAP
Trigger: CGGTGCTGTCCATCTCGGCAAATACTGGCCAAGTCC...GCTAAATGTCTGTTTTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR TCA 72 bp GACAGAAGCTTCTTCAAGCAGCTAGTAGCTCGGATTTaGCTATCAGCAGCTTTACGGGTTCTCCAAACACCT +
Preference number: 3 (lower is better)
Translates to: DRSFFKQLVARI*LSAALRVLQTP
Trigger: AGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAGCTTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR-3UTR CAA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCGCTAGTAGCTCGGATTaGACTATCAGCAGCTTTACG +
Preference number: 3 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVASSSD*TISSFT
Trigger: CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR-3UTR CAA 90 bp CAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACGCTAGTAGCTCGGATTaGACTATCAGCAGCTTTACG +
Preference number: 3 (lower is better)
Translates to: QGESFKVSTKSGQCLTYYASSSD*TISSFT
Trigger: CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC...GTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR-3UTR CAA 90 bp GAAACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGTTCCGAGCTAATAATTaGGGATCCAGCGGTAAGGGT +
Preference number: 3 (lower is better)
Translates to: ETLLKPSKVKVSRFLPRVFRANN*GSSGKG
Trigger: ACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAA...CACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR GCA 72 bp TCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTaGCGAGCCAGTCACTCAGGTTATTCAGAGGGTCAC +
Preference number: 3 (lower is better)
Translates to: SNFGNKNGYKAN*RASHSGYSEGH
Trigger: GTGACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR CCA 72 bp ATAGGATTCATTCAGCTGGAAAGCCACTCCATGGTCTaGAGTGACTACAGCATGAAGATTTTAAGGTGTGAC +
Preference number: 3 (lower is better)
Translates to: IGFIQLESHSMV*SDYSMKILRCD
Trigger: GTCACACCTTAAAATCTTCATGCTGTAGTCACTCCAGACCATGGAGTGGCTTTCCAGCTGAATGAATCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR-3UTR CAA 90 bp CTTCTACACAGGTTTTTAAAAGCCTGGTTTGGTTTCAGCACATTGAGCTTACAGGCTAGTAGCTCGGATTaGACTATCAGCAGCTTTACG +
Preference number: 3 (lower is better)
Translates to: LLHRFLKAWFGFSTLSLQASSSD*TISSFT
Trigger: CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC...CTGTAAGCTCAATGTGCTGAAACCAAACCAGGCTTTTAAAAACCTGTGTAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR-3UTR CAA 90 bp ATGAGGCATCACCATGGTCACAATGGTGCTGTGAGGTACAACAAATCACAAGAACTTTGTATCTCCTGGTaGCAAACCTCTCTCAGAATT +
Preference number: 3 (lower is better)
Translates to: MRHHHGHNGAVRYNKSQELCISW*QTSLRI
Trigger: AATTCTGAGAGAGGTTTGCAACCAGGAGATACAAAG...TTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCATGGTGATGCCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CCA 72 bp TACCTAGGAATACAGTTACATTCCGAGCTAATAATTTaGGATCCAGCGGTAAGGGTGACAGAAGCTTCTTCA +
Preference number: 3 (lower is better)
Translates to: YLGIQLHSELII*DPAVRVTEASS
Trigger: TGAAGAAGCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR GCA 72 bp TATCATGCAAATGAGGCATCACCATGGTCACAATGGTaGTGTGAGGTACAACAAATCACAAGAAAACAGACA +
Preference number: 3 (lower is better)
Translates to: YHANEASPWSQW*CEVQQITRKQT
Trigger: TGTCTGTTTTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCATGGTGATGCCTCATTTGCATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CCA 72 bp AACCAAACTTACTACTTTAACCCCAGAAGAATAATGTaGGGCAATGCATTTCTGCAGGTGGCAAAGCTTAAC +
Preference number: 3 (lower is better)
Translates to: NQTYYFNPRRIM*GNAFLQVAKLN
Trigger: GTTAAGCTTTGCCACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTAAGTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CCA 72 bp ACATATCATGCAAATGAGGCATCACCATGGTCACAATaGTGCTGTGAGGTACAACAAATCACAAGAAAACAG +
Preference number: 3 (lower is better)
Translates to: TYHANEASPWSQ*CCEVQQITRKQ
Trigger: CTGTTTTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCATGGTGATGCCTCATTTGCATGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp GCCAGTATTTGCCGAGATGGACAGCACCGCATTATGTGGAGGCATGTACTTTATGCTCCAGCTGCTGTGTaGGCTCCAGGGACCGGCGCA +
Preference number: 4 (lower is better)
Translates to: ASICRDGQHRIMWRHVLYAPAAV*APGTGA
Trigger: TGCGCCGGTCCCTGGAGCGCACACAGCAGCTGGAGC...ATAAAGTACATGCCTCCACATAATGCGGTGCTGTCCATCTCGGCAAATACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTGCTCCAGCTGCTGTGTaGGCTCCAGGGACCGGCGCA +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFAPAAV*APGTGA
Trigger: TGCGCCGGTCCCTGGAGCGCACACAGCAGCTGGAGC...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp CTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAGGTGCGGCCCTTGGATaGACGTCCGGACGATCCTGG +
Preference number: 4 (lower is better)
Translates to: LQAASSSDLTISSFTGSPGAALG*TSGRSW
Trigger: CCAGGATCGTCCGGACGTGCATCCAAGGGCCGCACC...TGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS-3UTR CCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACGTCCTCCGGGTCCAATaGCCAGTGGTGCTCCCCACG +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNVLRVQ*PVVLPT
Trigger: CGTGGGGAGCACCACTGGCCATTGGACCCGGAGGAC...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp AGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCGCGCTCCATCGGGATaGGCCGGCCGCACAGGCGCA +
Preference number: 4 (lower is better)
Translates to: SHSGYSEGHYDNREVQEVRAPSG*AGRTGA
Trigger: TGCGCCTGTGCGGCCGGCGCATCCCGATGGAGCGCG...CACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS-3UTR GCA 90 bp GCCAGTATTTGCCGAGATGGACAGCACCGCATTATGTGGAGGCATGTACTTTATCACCGCGCCCGGTTCTaGGATCTTCCCTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ASICRDGQHRIMWRHVLYHRARF*DLPWER
Trigger: TCTCTCCCAGGGAAGATCGCAGAACCGGGCGCGGTG...ATAAAGTACATGCCTCCACATAATGCGGTGCTGTCCATCTCGGCAAATACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCCCTGCGGCAGCAGCATaGTTCTCGCTGGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: AASSSDLTISSFTGSPNTPAAAA*FSLACL
Trigger: CAAGCATGCCAGCGAGAAGCATGCTGCTGCCGCAGG...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACCTTGAGGCCGGTAGTTaGGCTGAGAGGTCCGCACCG +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNLEAGS*AERSAP
Trigger: CGGTGCGGACCTCTCAGCCCAACTACCGGCCTCAAG...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GAAACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCTCCAGCTGCTGTGTaGGCTCCAGGGACCGGCGCA +
Preference number: 4 (lower is better)
Translates to: ETLLKPSKVKVSRFLPRVAPAAV*APGTGA
Trigger: TGCGCCGGTCCCTGGAGCGCACACAGCAGCTGGAGC...CACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp ATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGCTCCAGCTGCTGTGTaGGCTCCAGGGACCGGCGCA +
Preference number: 4 (lower is better)
Translates to: IRMVIKRIAEPVTQVIQRAPAAV*APGTGA
Trigger: TGCGCCGGTCCCTGGAGCGCACACAGCAGCTGGAGC...CCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACCCTGCGGCAGCAGCATaGTTCTCGCTGGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNPAAAA*FSLACL
Trigger: CAAGCATGCCAGCGAGAAGCATGCTGCTGCCGCAGG...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp GCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTCCTGCGGCAGCAGCATaGTTCTCGCTGGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: AKAQQGESFKVSTKSGQCPAAAA*FSLACL
Trigger: CAAGCATGCCAGCGAGAAGCATGCTGCTGCCGCAGG...ACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTCCTCCTGTTCCTTCTaGAGCCGGGCCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: AASSSDLTISSFTGSPNTSSCSF*SRACLL
Trigger: GAGAAGACAGGCCCGGCTGCAGAAGGAACAGGAGGA...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp CTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTCTTGAGGCCGGTAGTTaGGCTGAGAGGTCCGCACCG +
Preference number: 4 (lower is better)
Translates to: LKPSKVKVSRFLPRVASVLEAGS*AERSAP
Trigger: CGGTGCGGACCTCTCAGCCCAACTACCGGCCTCAAG...AACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTCTTGAGGCCGGTAGTTaGGCTGAGAGGTCCGCACCG +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFLEAGS*AERSAP
Trigger: CGGTGCGGACCTCTCAGCCCAACTACCGGCCTCAAG...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCGTCCTCCGGGTCCAATaGCCAGTGGTGCTCCCCACG +
Preference number: 4 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVVLRVQ*PVVLPT
Trigger: CGTGGGGAGCACCACTGGCCATTGGACCCGGAGGAC...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTGGGCTTCCCCAAGGCTaGGCTGTTTTCGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFGLPQG*AVFGFP
Trigger: GGGAAAGCCGAAAACAGCGCAGCCTTGGGGAAGCCC...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp GCCAGTATTTGCCGAGATGGACAGCACCGCATTATGTGGAGGCATGTACTTTATTCCTCCTGTTCCTTCTaGAGCCGGGCCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ASICRDGQHRIMWRHVLYSSCSF*SRACLL
Trigger: GAGAAGACAGGCCCGGCTGCAGAAGGAACAGGAGGA...ATAAAGTACATGCCTCCACATAATGCGGTGCTGTCCATCTCGGCAAATACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp CTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCATCCTCCTGTTCCTTCTaGAGCCGGGCCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LQAASSSDLTISSFTGSPSSCSF*SRACLL
Trigger: GAGAAGACAGGCCCGGCTGCAGAAGGAACAGGAGGA...TGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp CTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTACAGCAGCTCTCTTTTaGTCCTCCCGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LLQAASSSDLTISSFTGSTAALF*SSRCRC
Trigger: GCAGCGGCAGCGGGAGGACCAAAAGAGAGCTGCTGT...AGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTACGTCCGGACGATCCTaGGCCAGGGAAAGGGCGTTT +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFTSGRS*ARERAF
Trigger: AAACGCCCTTTCCCTGGCCCAGGATCGTCCGGACGT...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS-3UTR CCA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATGAGGGGTGCGGCCCTTaGATGCACGTCCGGACGATC +
Preference number: 4 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYEGCGP*MHVRTI
Trigger: GATCGTCCGGACGTGCATCCAAGGGCCGCACCCCTC...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS-3UTR TCA 90 bp CTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTTCAAGGGCATCCAGATaGATGAGTCCCCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLQAASSSDLTISSFTGSSRASR*MSPPAG
Trigger: GCCAGCTGGGGGACTCATTCATCTGGATGCCCTTGA...AGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp CTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGCACCGCGCCCGGTTCTaGGATCTTCCCTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LPRNTVTFRANNLGSSGKHRARF*DLPWER
Trigger: TCTCTCCCAGGGAAGATCGCAGAACCGGGCGCGGTG...CTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTGGTCCTCCCGCTaGCGCTGCTCTTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: AASSSDLTISSFTGSPNTFWSSR*RCSSSF
Trigger: AAAACTGGAAGAGCAGCGGCAGCGGGAGGACCAAAA...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp CTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTTCGGCTTTCCCTCCTaGGGCAGCAGCATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LKPSKVKVSRFLPRVASVFGFPS*GSSMLL
Trigger: GAGAAGCATGCTGCTGCCGCAGGAGGGAAAGCCGAA...AACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp AAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGTGGGCTTCCCCAAGGCTaGGCTGTTTTCGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: KNGYKANCRASHSGYSEGGLPQG*AVFGFP
Trigger: GGGAAAGCCGAAAACAGCGCAGCCTTGGGGAAGCCC...ACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTGACTTGGCCAGTATTTaGCGAGATGGACAGCACCGC +
Preference number: 4 (lower is better)
Translates to: AKAQQGESFKVSTKSGQCDLASI*RDGQHR
Trigger: GCGGTGCTGTCCATCTCGGCAAATACTGGCCAAGTC...ACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp GACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTTCGCACAGAGAGGGGTaGGGCCCTTGGATGCACGTC +
Preference number: 4 (lower is better)
Translates to: DYQQLYGFSKHLLLKGCCSHREG*GPWMHV
Trigger: GACGTGCATCCAAGGGCCGCACCCCTCTCTGTGCGA...ACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS-3UTR CCA 90 bp GCCAGTATTTGCCGAGATGGACAGCACCGCATTATGTGGAGGCATGTACTTTATGGGTCCAATGGCCAGTaGTGCTCCCCACGAATACTT +
Preference number: 4 (lower is better)
Translates to: ASICRDGQHRIMWRHVLYGSNGQ*CSPRIL
Trigger: AAGTATTCGTGGGGAGCACCACTGGCCATTGGACCC...ATAAAGTACATGCCTCCACATAATGCGGTGCTGTCCATCTCGGCAAATACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACGGGTCCAATGGCCAGTaGTGCTCCCCACGAATACTT +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNGSNGQ*CSPRIL
Trigger: AAGTATTCGTGGGGAGCACCACTGGCCATTGGACCC...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp GACATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGTCCTCCGGGTCCAATaGCCAGTGGTGCTCCCCACG +
Preference number: 4 (lower is better)
Translates to: DILPRNTVTFRANNLGSSVLRVQ*PVVLPT
Trigger: CGTGGGGAGCACCACTGGCCATTGGACCCGGAGGAC...GCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGAGTCCTCCGGGTCCAATaGCCAGTGGTGCTCCCCACG +
Preference number: 4 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGVLRVQ*PVVLPT
Trigger: CGTGGGGAGCACCACTGGCCATTGGACCCGGAGGAC...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
3UTR CAA 72 bp TTCTGTGTGCCTGTCATAAAGGGACTTGGCCAGTATTaGCCGAGATGGACAGCACCGCATTATGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FCVPVIKGLGQY*PRWTAPHYVEA
Trigger: TGCCTCCACATAATGCGGTGCTGTCCATCTCGGCAAATACTGGCCAAGTCCCTTTATGACAGGCACACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp AAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGTTCAAGGGCATCCAGATaGATGAGTCCCCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KNGYKANCRASHSGYSEGSRASR*MSPPAG
Trigger: GCCAGCTGGGGGACTCATTCATCTGGATGCCCTTGA...ACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCTCAAGGGCATCCAGATaGATGAGTCCCCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVSRASR*MSPPAG
Trigger: GCCAGCTGGGGGACTCATTCATCTGGATGCCCTTGA...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp ATGAAGATTTTAAGGTGTGACACGAAAGAGTCCTTGCTAGATTCAGTTGCCCATCACCGCGCCCGGTTCTaGGATCTTCCCTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: MKILRCDTKESLLDSVAHHRARF*DLPWER
Trigger: TCTCTCCCAGGGAAGATCGCAGAACCGGGCGCGGTG...ATGGGCAACTGAATCTAGCAAGGACTCTTTCGTGTCACACCTTAAAATCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp CTATGGTTTCTGTGTGCCTGTCATAAAGGGACTTGGCCAGTATTTGCCGAGATGTTCTCCAGGATCTGTTaGTCCCGAGCAGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: LWFLCACHKGTWPVFAEMFSRIC*SRAARH
Trigger: ATGTCTGGCTGCTCGGGAGCAACAGATCCTGGAGAA...CATCTCGGCAAATACTGGCCAAGTCCCTTTATGACAGGCACACAGAAACCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp GCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTCTCCAGGATCTGTTaGTCCCGAGCAGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: AKAQQGESFKVSTKSGQCFSRIC*SRAARH
Trigger: ATGTCTGGCTGCTCGGGAGCAACAGATCCTGGAGAA...ACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACTTCTCCAGGATCTGTTaGTCCCGAGCAGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNFSRIC*SRAARH
Trigger: ATGTCTGGCTGCTCGGGAGCAACAGATCCTGGAGAA...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp ATGAGGCATCACCATGGTCACAATGGTGCTGTGAGGTACAACAAATCACAAGAATCCTCCCGCTGCCGCTaGTCTTCCAGTTTTCGCCAT +
Preference number: 4 (lower is better)
Translates to: MRHHHGHNGAVRYNKSQESSRCR*SSSFRH
Trigger: ATGGCGAAAACTGGAAGAGCAGCGGCAGCGGGAGGA...TTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCATGGTGATGCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCGAAGTTGCTGTTCGTTaGCCCCGCTTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSEVAVR*PRFTFS
Trigger: GGAGAAGGTGAAGCGGGGGCAACGAACAGCAACTTC...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTGCTTCTCGCTGGCATaGTTGTCCACTACATGCTTC +
Preference number: 4 (lower is better)
Translates to: AASSSDLTISSFTGSPNTCFSLA*LSTTCF
Trigger: GAAGCATGTAGTGGACAAGCATGCCAGCGAGAAGCA...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp ATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGGGCTTCCCCAAGGCTaGGCTGTTTTCGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: IRMVIKRIAEPVTQVIQRGLPQG*AVFGFP
Trigger: GGGAAAGCCGAAAACAGCGCAGCCTTGGGGAAGCCC...CCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp CTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTGACTTGGCCAGTATTTaGCGAGATGGACAGCACCGC +
Preference number: 4 (lower is better)
Translates to: LLQAASSSDLTISSFTGSDLASI*RDGQHR
Trigger: GCGGTGCTGTCCATCTCGGCAAATACTGGCCAAGTC...AGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATACAGCAGCTCTCTTTTaGTCCTCCCGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYTAALF*SSRCRC
Trigger: GCAGCGGCAGCGGGAGGACCAAAAGAGAGCTGCTGT...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp CAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACACAGCAGCTCTCTTTTaGTCCTCCCGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QGESFKVSTKSGQCLTYYTAALF*SSRCRC
Trigger: GCAGCGGCAGCGGGAGGACCAAAAGAGAGCTGCTGT...GTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp ACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCGGGTCCAATGGCCAGTaGTGCTCCCCACGAATACTT +
Preference number: 4 (lower is better)
Translates to: TLLKPSKVKVSRFLPRVAGSNGQ*CSPRIL
Trigger: AAGTATTCGTGGGGAGCACCACTGGCCATTGGACCC...GGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp CTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCACTTCACAGGAGACCCTaGGTAGGGAGGTTTCGTTGT +
Preference number: 4 (lower is better)
Translates to: LQAASSSDLTISSFTGSPLHRRP*VGRFRC
Trigger: ACAACGAAACCTCCCTACCCAGGGTCTCCTGTGAAG...TGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp GCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTCTCTTGGGCATGTCTTaGCCAGAAAGGGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: AKAQQGESFKVSTKSGQCLLGMS*PERAGK
Trigger: CTTACCTGCCCTTTCTGGCCAAGACATGCCCAAGAG...ACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp CTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCACTCTTGGGCATGTCTTaGCCAGAAAGGGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: LQAASSSDLTISSFTGSPLLGMS*PERAGK
Trigger: CTTACCTGCCCTTTCTGGCCAAGACATGCCCAAGAG...TGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACTTGGGGATAAGTTTCTaGGGCAGCGTGATCCACACC +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNLGISF*GSVIHT
Trigger: GGTGTGGATCACGCTGCCCCAGAAACTTATCCCCAA...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp TCCAATGTGGGCCCCCTATTGTTTCAGAATGCTATGGTTTTTGTTTGCGCCTGGTTTCACTGGATCTCTTaGGGAATGTCGGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: SNVGPLLFQNAMVFVCAWFHWIS*GMSGDQ
Trigger: CTGGTCCCCCGACATTCCCCAAGAGATCCAGTGAAA...CCAGGCGCAAACAAAAACCATAGCATTCTGAAACAATAGGGGGCCCACATTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTGTTTCTGGGGCAGCGTaGTCCACACCATTAACTTCC +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFVSGAA*STPLTS
Trigger: GGAAGTTAATGGTGTGGATCACGCTGCCCCAGAAAC...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCGTTTCTGGGGCAGCGTaGTCCACACCATTAACTTCC +
Preference number: 4 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSVSGAA*STPLTS
Trigger: GGAAGTTAATGGTGTGGATCACGCTGCCCCAGAAAC...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACGTCAACAGAAGGTGTTaGGAGGAGTTTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNVNRRC*EEFLGQ
Trigger: CTGGCCAAGAAACTCCTCTCAACACCTTCTGTTGAC...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp AAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGTGAAGTTGCTGTTCGTTaGCCCCGCTTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KNGYKANCRASHSGYSEGEVAVR*PRFTFS
Trigger: GGAGAAGGTGAAGCGGGGGCAACGAACAGCAACTTC...ACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp CGAGCCAGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTTGCTGTTCGTTaGCCCCGCTTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RASHSGYSEGHYDNREVQEVAVR*PRFTFS
Trigger: GGAGAAGGTGAAGCGGGGGCAACGAACAGCAACTTC...CTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACTGGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GCCAGTATTTGCCGAGATGGACAGCACCGCATTATGTGGAGGCATGTACTTTATTGCTTCTCGCTGGCATaGTTGTCCACTACATGCTTC +
Preference number: 4 (lower is better)
Translates to: ASICRDGQHRIMWRHVLYCFSLA*LSTTCF
Trigger: GAAGCATGTAGTGGACAAGCATGCCAGCGAGAAGCA...ATAAAGTACATGCCTCCACATAATGCGGTGCTGTCCATCTCGGCAAATACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGCCTGCGGCAGCAGCATaGTTCTCGCTGGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKPAAAA*FSLACL
Trigger: CAAGCATGCCAGCGAGAAGCATGCTGCTGCCGCAGG...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp CTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGTTCGGCTTTCCCTCCTaGGGCAGCAGCATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPRNTVTFRANNLGSSGKFGFPS*GSSMLL
Trigger: GAGAAGCATGCTGCTGCCGCAGGAGGGAAAGCCGAA...CTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTTTCGGCTTTCCCTCCTaGGGCAGCAGCATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: DYQQLYGFSKHLLLKGCCFGFPS*GSSMLL
Trigger: GAGAAGCATGCTGCTGCCGCAGGAGGGAAAGCCGAA...ACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCGGTTATAAAGCGAATTaGCGAGCCAGTCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: AASSSDLTISSFTGSPNTGYKAN*RASHSG
Trigger: ACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACC...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGACAGCAGCTCTCTTTTaGTCCTCCCGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKTAALF*SSRCRC
Trigger: GCAGCGGCAGCGGGAGGACCAAAAGAGAGCTGCTGT...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp ACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCTTGGGGATAAGTTTCTaGGGCAGCGTGATCCACACC +
Preference number: 4 (lower is better)
Translates to: TLLKPSKVKVSRFLPRVALGISF*GSVIHT
Trigger: GGTGTGGATCACGCTGCCCCAGAAACTTATCCCCAA...GGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTTGGGGATAAGTTTCTaGGGCAGCGTGATCCACACC +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFLGISF*GSVIHT
Trigger: GGTGTGGATCACGCTGCCCCAGAAACTTATCCCCAA...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTTTCACTGGATCTCTTaGGGAATGTCGGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFFHWIS*GMSGDQ
Trigger: CTGGTCCCCCGACATTCCCCAAGAGATCCAGTGAAA...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTACCTGCCCAGAGAGCATaGCTGAAGCTCTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLPAQRA*LKLCFW
Trigger: CCAGAAGCAGAGCTTCAGTCATGCTCTCTGGGCAGG...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS-3UTR TCA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATCAAGGGCATCCAGATaGATGAGTCCCCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGSRASR*MSPPAG
Trigger: GCCAGCTGGGGGACTCATTCATCTGGATGCCCTTGA...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp CTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCATACAGTCGTCCAGGCTaGGATTTTCACTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LQAASSSDLTISSFTGSPYSRPG*DFHWIS
Trigger: AGAGATCCAGTGAAAATCTCAGCCTGGACGACTGTA...TGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp CTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTGTCAACAGAAGGTGTTaGGAGGAGTTTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLQAASSSDLTISSFTGSVNRRC*EEFLGQ
Trigger: CTGGCCAAGAAACTCCTCTCAACACCTTCTGTTGAC...AGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCCATCGCTCCTCCATTTaGTTTTCGTACTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSHRSSI*FSYCSL
Trigger: CAGGCTGCAGTACGAAAAGCAAATGGAGGAGCGATG...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp TTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTCCTCCCGCTGCCGCTaGTCTTCCAGTTTTCGCCAT +
Preference number: 4 (lower is better)
Translates to: FDYQQLYGFSKHLLLKGCSSRCR*SSSFRH
Trigger: ATGGCGAAAACTGGAAGAGCAGCGGCAGCGGGAGGA...GCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp ATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTTCCTCCCGCTGCCGCTaGTCTTCCAGTTTTCGCCAT +
Preference number: 4 (lower is better)
Translates to: ILPRNTVTFRANNLGSSGSSRCR*SSSFRH
Trigger: ATGGCGAAAACTGGAAGAGCAGCGGCAGCGGGAGGA...ACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGTCCTCCCGCTGCCGCTaGTCTTCCAGTTTTCGCCAT +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKSSRCR*SSSFRH
Trigger: ATGGCGAAAACTGGAAGAGCAGCGGCAGCGGGAGGA...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp CGAGCCAGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGTTTTGGTCCTCCCGCTaGCGCTGCTCTTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: RASHSGYSEGHYDNREVQFWSSR*RCSSSF
Trigger: AAAACTGGAAGAGCAGCGGCAGCGGGAGGACCAAAA...CTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACTGGCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTTTTTTCAGCTCCAGCTaGTGTGTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: DYQQLYGFSKHLLLKGCCFFSSS*CVRSRD
Trigger: GTCCCTGGAGCGCACACAGCAGCTGGAGCTGAAAAA...ACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTTTTTCAGCTCCAGCTaGTGTGTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYFFSSS*CVRSRD
Trigger: GTCCCTGGAGCGCACACAGCAGCTGGAGCTGAAAAA...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp ATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGTTTTTCAGCTCCAGCTaGTGTGTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: IRMVIKRIAEPVTQVIQRFFSSS*CVRSRD
Trigger: GTCCCTGGAGCGCACACAGCAGCTGGAGCTGAAAAA...CCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp AGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGTTCGGCTTTCCCTCCTaGGGCAGCAGCATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SHSGYSEGHYDNREVQEVFGFPS*GSSMLL
Trigger: GAGAAGCATGCTGCTGCCGCAGGAGGGAAAGCCGAA...CACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp ACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTGGGCTTCCCCAAGGCTaGGCTGTTTTCGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: TQVIQRVTMIIEKFRKCFGLPQG*AVFGFP
Trigger: GGGAAAGCCGAAAACAGCGCAGCCTTGGGGAAGCCC...AAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp TGGTCACAATGGTGCTGTGAGGTACAACAAATCACAAGAAAACAGACATTTAGCTCCTCCTGTTCCTTCTaGAGCCGGGCCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: WSQWCCEVQQITRKQTFSSSCSF*SRACLL
Trigger: GAGAAGACAGGCCCGGCTGCAGAAGGAACAGGAGGA...GCTAAATGTCTGTTTTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp GCCAGTATTTGCCGAGATGGACAGCACCGCATTATGTGGAGGCATGTACTTTATCTGAAGCTCTGCTTCTaGCTAAAGAAGACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: ASICRDGQHRIMWRHVLYLKLCF*LKKTVW
Trigger: CCACACAGTCTTCTTTAGCCAGAAGCAGAGCTTCAG...ATAAAGTACATGCCTCCACATAATGCGGTGCTGTCCATCTCGGCAAATACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS-3UTR CCA 90 bp TACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGGCACTTCACAGGAGACCCTaGGTAGGGAGGTTTCGTTGT +
Preference number: 4 (lower is better)
Translates to: YYFNPRRIMWGNAFLQVALHRRP*VGRFRC
Trigger: ACAACGAAACCTCCCTACCCAGGGTCTCCTGTGAAG...TGCCACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCCTTCACAGGAGACCCTaGGTAGGGAGGTTTCGTTGT +
Preference number: 4 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVLHRRP*VGRFRC
Trigger: ACAACGAAACCTCCCTACCCAGGGTCTCCTGTGAAG...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp CGAGCCAGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGCTCTTGGGCATGTCTTaGCCAGAAAGGGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: RASHSGYSEGHYDNREVQLLGMS*PERAGK
Trigger: CTTACCTGCCCTTTCTGGCCAAGACATGCCCAAGAG...CTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACTGGCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp CAGAAGCTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGCAGCATGCTTCTCGCTaGCATGCTTGTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: QKLLQAASSSDLTISSFTQHASR*HACPLH
Trigger: ATGTAGTGGACAAGCATGCCAGCGAGAAGCATGCTG...CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAGCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp CAGAAGCTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGCTGGACCCCCACTTTaGGGTCTTCTTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: QKLLQAASSSDLTISSFTAGPPL*GLLSSL
Trigger: AAGTGAAGAAAGAAGACCCCAAAGTGGGGGTCCAGC...CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAGCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp CATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCTTCTTCAGCTGGACCCCCACTTTaGGGTCTTCTTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: HSELIIWDPAVRVTEASSAGPPL*GLLSSL
Trigger: AAGTGAAGAAAGAAGACCCCAAAGTGGGGGTCCAGC...TGAAGAAGCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTGCTGGACCCCCACTTTaGGGTCTTCTTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFAGPPL*GLLSSL
Trigger: AAGTGAAGAAAGAAGACCCCAAAGTGGGGGTCCAGC...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp TACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGGCATTGGGGATAAGTTTCTaGGGCAGCGTGATCCACACC +
Preference number: 4 (lower is better)
Translates to: YYFNPRRIMWGNAFLQVALGISF*GSVIHT
Trigger: GGTGTGGATCACGCTGCCCCAGAAACTTATCCCCAA...TGCCACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp TCCAATGTGGGCCCCCTATTGTTTCAGAATGCTATGGTTTTTGTTTGCGCCTGGAATGAGTCCCCCAGCTaGCTTAAGCCCATTAGAGAA +
Preference number: 4 (lower is better)
Translates to: SNVGPLLFQNAMVFVCAWNESPS*LKPIRE
Trigger: TTCTCTAATGGGCTTAAGCCAGCTGGGGGACTCATT...CCAGGCGCAAACAAAAACCATAGCATTCTGAAACAATAGGGGGCCCACATTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp CTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTGGAAAGCCACTCCATaGTCTGGAGTGACTACAGCA +
Preference number: 4 (lower is better)
Translates to: LKPSKVKVSRFLPRVASVWKATP*SGVTTA
Trigger: TGCTGTAGTCACTCCAGACCATGGAGTGGCTTTCCA...AACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp TCCAATGTGGGCCCCCTATTGTTTCAGAATGCTATGGTTTTTGTTTGCGCCTGGATACTGGGTCCAATGTaGGCCCCCTATTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: SNVGPLLFQNAMVFVCAWILGPM*APYCFR
Trigger: TCTGAAACAATAGGGGGCCCACATTGGACCCAGTAT...CCAGGCGCAAACAAAAACCATAGCATTCTGAAACAATAGGGGGCCCACATTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTCTCTGCCTCTCATCTaGTTTCAAAAATCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: AASSSDLTISSFTGSPNTSLPLI*FQKSLH
Trigger: ATGGAGGGATTTTTGAAATCAGATGAGAGGCAGAGA...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp CATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCTTCTTCAACAGACATGGAATACTaGATCATTGGCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: HSELIIWDPAVRVTEASSTDMEY*IIGLPR
Trigger: TCTGGGCAGGCCAATGATTCAGTATTCCATGTCTGT...TGAAGAAGCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS-3UTR TCA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCCATTTCACTCACTGGTaGAAATTCCGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: AASSSDLTISSFTGSPNTHFTHW*KFRDRD
Trigger: ATCTCTATCCCGGAATTTTCACCAGTGAGTGAAATG...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp AAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGTGTCAACAGAAGGTGTTaGGAGGAGTTTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KNGYKANCRASHSGYSEGVNRRC*EEFLGQ
Trigger: CTGGCCAAGAAACTCCTCTCAACACCTTCTGTTGAC...ACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp CTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCTAGTAGCTCGGATTTaGCTATCAGCAGCTTTACGG +
Preference number: 4 (lower is better)
Translates to: LLQAASSSDLTISSFTGSLVARI*LSAALR
Trigger: CCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAG...AGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTCTAGTAGCTCGGATTTaGCTATCAGCAGCTTTACGG +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFLVARI*LSAALR
Trigger: CCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAG...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACGTCACAATGGTGCTGTaGGGTACAACAAATCACAAG +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNVTMVL*GTTNHK
Trigger: CTTGTGATTTGTTGTACCTCACAGCACCATTGTGAC...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTTTTGGTCCTCCCGCTaGCGCTGCTCTTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYFWSSR*RCSSSF
Trigger: AAAACTGGAAGAGCAGCGGCAGCGGGAGGACCAAAA...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp CAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACTTTTGGTCCTCCCGCTaGCGCTGCTCTTCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: QGESFKVSTKSGQCLTYYFWSSR*RCSSSF
Trigger: AAAACTGGAAGAGCAGCGGCAGCGGGAGGACCAAAA...GTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp TTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTTTTTCAGCTCCAGCTaGTGTGTGCGCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: FDYQQLYGFSKHLLLKGCFFSSS*CVRSRD
Trigger: GTCCCTGGAGCGCACACAGCAGCTGGAGCTGAAAAA...GCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGAGAAGTTGCTGTTCGTTaGCCCCGCTTCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGEVAVR*PRFTFS
Trigger: GGAGAAGGTGAAGCGGGGGCAACGAACAGCAACTTC...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp CGAGCCAGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGTGCTTCTCGCTGGCATaGTTGTCCACTACATGCTTC +
Preference number: 4 (lower is better)
Translates to: RASHSGYSEGHYDNREVQCFSLA*LSTTCF
Trigger: GAAGCATGTAGTGGACAAGCATGCCAGCGAGAAGCA...CTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACTGGCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp CTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCTCTCCAGTCTCTCCTaGTCAATCTGCAGCATAATC +
Preference number: 4 (lower is better)
Translates to: LLQAASSSDLTISSFTGSLSSLS*SICSII
Trigger: GATTATGCTGCAGATTGAGCAGGAGAGACTGGAGAG...AGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCCTCTCCAGTCTCTCCTaGTCAATCTGCAGCATAATC +
Preference number: 4 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSLSSLS*SICSII
Trigger: GATTATGCTGCAGATTGAGCAGGAGAGACTGGAGAG...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTCTGAAAGCCAGACCATaGTATGGTTTCTGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFLKARP*YGFCVP
Trigger: AGGCACACAGAAACCATAGCATGGTCTGGCTTTCAG...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCCTGAAAGCCAGACCATaGTATGGTTTCTGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSLKARP*YGFCVP
Trigger: AGGCACACAGAAACCATAGCATGGTCTGGCTTTCAG...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp CTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCACCATGGTCACAATGGTaGTGTGAGGTACAACAAATC +
Preference number: 4 (lower is better)
Translates to: LQAASSSDLTISSFTGSPPWSQW*CEVQQI
Trigger: GATTTGTTGTACCTCACAGCACCATTGTGACCATGG...TGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGGTCCAATGGCCAGTaGTGCTCCCCACGAATACTT +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKGSNGQ*CSPRIL
Trigger: AAGTATTCGTGGGGAGCACCACTGGCCATTGGACCC...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp AAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGTACAGGCGTTTATTCATaGGAGGCTCCGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KNGYKANCRASHSGYSEGTGVYS*EAPLAL
Trigger: CAAAGCCAACGGAGCCTCCCATGAATAAACGCCTGT...ACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp CTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAGGATATTGCCACGGTaGATGAAGACAGGCGTTTAT +
Preference number: 4 (lower is better)
Translates to: LQAASSSDLTISSFTGSPRILPR*MKTGVY
Trigger: ATAAACGCCTGTCTTCATCCACCGTGGCAATATCCT...TGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000452324.3
CDS-3UTR CCA 90 bp GCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTATCACAGGAGAAGATaGTCTCTTAGGAATGCCTCC +
Preference number: 4 (lower is better)
Translates to: AKAQQGESFKVSTKSGQCYHRRR*SLRNAS
Trigger: GGAGGCATTCCTAAGAGACCATCTTCTCCTGTGATA...ACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACTATCACAGGAGAAGATaGTCTCTTAGGAATGCCTCC +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNYHRRR*SLRNAS
Trigger: GGAGGCATTCCTAAGAGACCATCTTCTCCTGTGATA...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp ATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGCTTCACAGGAGACCCTaGGTAGGGAGGTTTCGTTGT +
Preference number: 4 (lower is better)
Translates to: IRMVIKRIAEPVTQVIQRLHRRP*VGRFRC
Trigger: ACAACGAAACCTCCCTACCCAGGGTCTCCTGTGAAG...CCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp ACTGCTTTCCAACAGAGAAACTCTGGAGATGGGGAACCTCCTGAATTTCTTCTCTTACCAGTTCCATTTTaGTCCAGAGACACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TAFQQRNSGDGEPPEFLLLPVPF*SRDTPG
Trigger: TCCTGGGGTGTCTCTGGACCAAAATGGAACTGGTAA...GAGAAGAAATTCAGGAGGTTCCCCATCTCCAGAGTTTCTCTGTTGGAAAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp CTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTTACCAGTTCCATTTTaGTCCAGAGACACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LKPSKVKVSRFLPRVASVLPVPF*SRDTPG
Trigger: TCCTGGGGTGTCTCTGGACCAAAATGGAACTGGTAA...AACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp ATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGTTTCACTGGATCTCTTaGGGAATGTCGGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: IRMVIKRIAEPVTQVIQRFHWIS*GMSGDQ
Trigger: CTGGTCCCCCGACATTCCCCAAGAGATCCAGTGAAA...CCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp CATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCTTCTTCATCCGAGCTAATAATTTaGGATCCAGCGGTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: HSELIIWDPAVRVTEASSSELII*DPAVRV
Trigger: CACCCTTACCGCTGGATCCCAAATTATTAGCTCGGA...TGAAGAAGCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp TCCAATGTGGGCCCCCTATTGTTTCAGAATGCTATGGTTTTTGTTTGCGCCTGGCCCAGAAGAATAATGTaGGGCAATGCATTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SNVGPLLFQNAMVFVCAWPRRIM*GNAFLQ
Trigger: CTGCAGAAATGCATTGCCCCACATTATTCTTCTGGG...CCAGGCGCAAACAAAAACCATAGCATTCTGAAACAATAGGGGGCCCACATTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGAGTTTCTGGGGCAGCGTaGTCCACACCATTAACTTCC +
Preference number: 4 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGVSGAA*STPLTS
Trigger: GGAAGTTAATGGTGTGGATCACGCTGCCCCAGAAAC...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp TCCAATGTGGGCCCCCTATTGTTTCAGAATGCTATGGTTTTTGTTTGCGCCTGGCATTTCACTCACTGGTaGAAATTCCGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: SNVGPLLFQNAMVFVCAWHFTHW*KFRDRD
Trigger: ATCTCTATCCCGGAATTTTCACCAGTGAGTGAAATG...CCAGGCGCAAACAAAAACCATAGCATTCTGAAACAATAGGGGGCCCACATTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCTACAGTCGTCCAGGCTaGGATTTTCACTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVYSRPG*DFHWIS
Trigger: AGAGATCCAGTGAAAATCTCAGCCTGGACGACTGTA...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp ACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCGTCACAATGGTGCTGTaGGGTACAACAAATCACAAG +
Preference number: 4 (lower is better)
Translates to: TLLKPSKVKVSRFLPRVAVTMVL*GTTNHK
Trigger: CTTGTGATTTGTTGTACCTCACAGCACCATTGTGAC...GGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp GCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTACATATCATGCAAATaGGGCATCACCATGGTCACA +
Preference number: 4 (lower is better)
Translates to: AKAQQGESFKVSTKSGQCYISCK*GITMVT
Trigger: TGTGACCATGGTGATGCCTCATTTGCATGATATGTA...ACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTCAAAAATCCCTCCATaGCTTGAGGCCGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYSKIPP*LEAGSW
Trigger: CCAACTACCGGCCTCAAGGCATGGAGGGATTTTTGA...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp CTTCTACACAGGTTTTTAAAAGCCTGGTTTGGTTTCAGCACATTGAGCTTACAGTTCTCCAGGATCTGTTaGTCCCGAGCAGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: LLHRFLKAWFGFSTLSLQFSRIC*SRAARH
Trigger: ATGTCTGGCTGCTCGGGAGCAACAGATCCTGGAGAA...CTGTAAGCTCAATGTGCTGAAACCAAACCAGGCTTTTAAAAACCTGTGTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp GAAACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGCATCGCTCCTCCATTTaGTTTTCGTACTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ETLLKPSKVKVSRFLPRVHRSSI*FSYCSL
Trigger: CAGGCTGCAGTACGAAAAGCAAATGGAGGAGCGATG...CACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTCATCGCTCCTCCATTTaGTTTTCGTACTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: DYQQLYGFSKHLLLKGCCHRSSI*FSYCSL
Trigger: CAGGCTGCAGTACGAAAAGCAAATGGAGGAGCGATG...ACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp GAAACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGTCCAATGGCCAGTGGTaGTCCCCACGAATACTTCTT +
Preference number: 4 (lower is better)
Translates to: ETLLKPSKVKVSRFLPRVSNGQW*SPRILL
Trigger: AAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGA...CACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCTTTCCCAACATCTCCTaGACCAGATGTAGACGTAGA +
Preference number: 4 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSFPNIS*TRCRRR
Trigger: TCTACGTCTACATCTGGTGCAGGAGATGTTGGGAAA...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATAACAGGAAGAGAAGTTaGTGTTCGTTGCCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYNRKRS*CSLPPL
Trigger: AAGCGGGGGCAACGAACAGCAACTTCTCTTCCTGTT...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp GAAACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGAACAGGAAGAGAAGTTaGTGTTCGTTGCCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: ETLLKPSKVKVSRFLPRVNRKRS*CSLPPL
Trigger: AAGCGGGGGCAACGAACAGCAACTTCTCTTCCTGTT...CACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTAACAGGAAGAGAAGTTaGTGTTCGTTGCCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: DYQQLYGFSKHLLLKGCCNRKRS*CSLPPL
Trigger: AAGCGGGGGCAACGAACAGCAACTTCTCTTCCTGTT...ACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTCTCTCCTGCTCAATCTaGAGCATAATCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFLSCSI*SIICSL
Trigger: GAGAGAACAGATTATGCTGCAGATTGAGCAGGAGAG...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCCTCTCCAGTCTCTCCTaGTCAATCTGCAGCATAATC +
Preference number: 4 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVLSSLS*SICSII
Trigger: GATTATGCTGCAGATTGAGCAGGAGAGACTGGAGAG...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp AAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGTGGTTATAAAGCGAATTaGCGAGCCAGTCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: KNGYKANCRASHSGYSEGGYKAN*RASHSG
Trigger: ACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACC...ACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp CGAGCCAGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGGGGCAATGCATTTCTaGAGGTGGCAAAGCTTAACA +
Preference number: 4 (lower is better)
Translates to: RASHSGYSEGHYDNREVQGAMHF*RWQSLT
Trigger: TGTTAAGCTTTGCCACCTGCAGAAATGCATTGCCCC...CTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACTGGCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACAATAATGTGGGGCAATaGATTTCTGCAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNNNVGQ*ISAGGK
Trigger: TTTGCCACCTGCAGAAATGCATTGCCCCACATTATT...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp CTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTTTCGTACTGCAGCCTaGCTCTTTTCTGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LKPSKVKVSRFLPRVASVFRTAA*LFSVSP
Trigger: TGGAGAAACAGAAAAGAGCCAGGCTGCAGTACGAAA...AACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATCATGGGAGGCTCCGTTaGCTTTGGCAAACTCATAGT +
Preference number: 4 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYHGRLR*LWQTHS
Trigger: ACTATGAGTTTGCCAAAGCCAACGGAGCCTCCCATG...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000452324.3
CDS-3UTR CCA 90 bp ACTTACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGCATGGGAGGCTCCGTTaGCTTTGGCAAACTCATAGT +
Preference number: 4 (lower is better)
Translates to: TYYFNPRRIMWGNAFLQVHGRLR*LWQTHS
Trigger: ACTATGAGTTTGCCAAAGCCAACGGAGCCTCCCATG...CACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATACAGGCGTTTATTCATaGGAGGCTCCGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYTGVYS*EAPLAL
Trigger: CAAAGCCAACGGAGCCTCCCATGAATAAACGCCTGT...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000452324.3
CDS-3UTR CCA 90 bp CAGAAGCTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGCTAAAGAAGACTGTGTaGGTGTCAACAGTCGCGAAA +
Preference number: 4 (lower is better)
Translates to: QKLLQAASSSDLTISSFTLKKTV*VSTVAK
Trigger: TTTCGCGACTGTTGACACCCACACAGTCTTCTTTAG...CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAGCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS-3UTR CCA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTACTCTTGGGCATGTCTTaGCCAGAAAGGGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLLLGMS*PERAGK
Trigger: CTTACCTGCCCTTTCTGGCCAAGACATGCCCAAGAG...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp GACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTCAGCATGCTTCTCGCTaGCATGCTTGTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: DYQQLYGFSKHLLLKGCCQHASR*HACPLH
Trigger: ATGTAGTGGACAAGCATGCCAGCGAGAAGCATGCTG...ACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCAATGAGTCCCCCAGCTaGCTTAAGCCCATTAGAGAA +
Preference number: 4 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVNESPS*LKPIRE
Trigger: TTCTCTAATGGGCTTAAGCCAGCTGGGGGACTCATT...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGTTTCACTGGATCTCTTaGGGAATGTCGGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKFHWIS*GMSGDQ
Trigger: CTGGTCCCCCGACATTCCCCAAGAGATCCAGTGAAA...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp TCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAAGCCACTCCATGGTCTaGAGTGACTACAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: SNFGNKNGYKANCRASHSSHSMV*SDYSMK
Trigger: CTTCATGCTGTAGTCACTCCAGACCATGGAGTGGCT...TGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTGTTTCAGAATGCTATaGTTTTTGTTTGCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: AASSSDLTISSFTGSPNTCFRML*FLFAPG
Trigger: ACCAGGCGCAAACAAAAACCATAGCATTCTGAAACA...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp AAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGTCAGTATTTGCCGAGATaGACAGCACCGCATTATGTG +
Preference number: 4 (lower is better)
Translates to: KNGYKANCRASHSGYSEGQYLPR*TAPHYV
Trigger: CACATAATGCGGTGCTGTCCATCTCGGCAAATACTG...ACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp ACTGCTTTCCAACAGAGAAACTCTGGAGATGGGGAACCTCCTGAATTTCTTCTCTCTCTGCCTCTCATCTaGTTTCAAAAATCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TAFQQRNSGDGEPPEFLLSLPLI*FQKSLH
Trigger: ATGGAGGGATTTTTGAAATCAGATGAGAGGCAGAGA...GAGAAGAAATTCAGGAGGTTCCCCATCTCCAGAGTTTCTCTGTTGGAAAGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp CAGAAGCTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGAATGTTTCGAGTGGGTaGAGACTTGTAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: QKLLQAASSSDLTISSFTNVSSG*RLVRRV
Trigger: AACCCTTCTTACAAGTCTTCACCCACTCGAAACATT...CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAGCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp ACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTGTTTCTGGGGCAGCGTaGTCCACACCATTAACTTCC +
Preference number: 4 (lower is better)
Translates to: TQVIQRVTMIIEKFRKCFVSGAA*STPLTS
Trigger: GGAAGTTAATGGTGTGGATCACGCTGCCCCAGAAAC...AAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp ACTGCTTTCCAACAGAGAAACTCTGGAGATGGGGAACCTCCTGAATTTCTTCTCCATTTCACTCACTGGTaGAAATTCCGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: TAFQQRNSGDGEPPEFLLHFTHW*KFRDRD
Trigger: ATCTCTATCCCGGAATTTTCACCAGTGAGTGAAATG...GAGAAGAAATTCAGGAGGTTCCCCATCTCCAGAGTTTCTCTGTTGGAAAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTACAGTCGTCCAGGCTaGGATTTTCACTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYYSRPG*DFHWIS
Trigger: AGAGATCCAGTGAAAATCTCAGCCTGGACGACTGTA...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp CGAGCCAGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGAGATGGGGAACCTCCTaGATTTCTTCTCTGTCTCAA +
Preference number: 4 (lower is better)
Translates to: RASHSGYSEGHYDNREVQRWGTS*ISSLSQ
Trigger: TTGAGACAGAGAAGAAATTCAGGAGGTTCCCCATCT...CTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACTGGCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCAGATGGGGAACCTCCTaGATTTCTTCTCTGTCTCAA +
Preference number: 4 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVRWGTS*ISSLSQ
Trigger: TTGAGACAGAGAAGAAATTCAGGAGGTTCCCCATCT...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp CATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCTTCTTCATACATATCATGCAAATaGGGCATCACCATGGTCACA +
Preference number: 4 (lower is better)
Translates to: HSELIIWDPAVRVTEASSYISCK*GITMVT
Trigger: TGTGACCATGGTGATGCCTCATTTGCATGATATGTA...TGAAGAAGCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACTCTTTGGCCAATCTCTaGCTCTCATCTGATTTCAAA +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNSLANL*LSSDFK
Trigger: TTTGAAATCAGATGAGAGGCAGAGATTGGCCAAAGA...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGTCCAATGGCCAGTGGTaGTCCCCACGAATACTTCTT +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKSNGQW*SPRILL
Trigger: AAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGA...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp TTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTCCAATGGCCAGTGGTaGTCCCCACGAATACTTCTT +
Preference number: 4 (lower is better)
Translates to: FDYQQLYGFSKHLLLKGCSNGQW*SPRILL
Trigger: AAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGA...GCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp TGGTCACAATGGTGCTGTGAGGTACAACAAATCACAAGAAAACAGACATTTAGCTGCTTCTCGCTGGCATaGTTGTCCACTACATGCTTC +
Preference number: 4 (lower is better)
Translates to: WSQWCCEVQQITRKQTFSCFSLA*LSTTCF
Trigger: GAAGCATGTAGTGGACAAGCATGCCAGCGAGAAGCA...GCTAAATGTCTGTTTTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACTCTGCTGCTTCTTTCTaGTTTTCAATCATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNSAASF*FSIMAF
Trigger: GAAAGCCATGATTGAAAAGCAGAAAGAAGCAGCAGA...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp GACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTGGGGCAATGCATTTCTaGAGGTGGCAAAGCTTAACA +
Preference number: 4 (lower is better)
Translates to: DYQQLYGFSKHLLLKGCCGAMHF*RWQSLT
Trigger: TGTTAAGCTTTGCCACCTGCAGAAATGCATTGCCCC...ACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp TTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCCATGGGAGGCTCCGTTaGCTTTGGCAAACTCATAGT +
Preference number: 4 (lower is better)
Translates to: FDYQQLYGFSKHLLLKGCHGRLR*LWQTHS
Trigger: ACTATGAGTTTGCCAAAGCCAACGGAGCCTCCCATG...GCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000452324.3
CDS-3UTR CCA 90 bp GCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTCTCAATGTTTCGAGTaGGTGAAGACTTGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: AKAQQGESFKVSTKSGQCSQCFE*VKTCKK
Trigger: CTTCTTACAAGTCTTCACCCACTCGAAACATTGAGA...ACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp AAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGTTATCACAGGAGAAGATaGTCTCTTAGGAATGCCTCC +
Preference number: 4 (lower is better)
Translates to: KNGYKANCRASHSGYSEGYHRRR*SLRNAS
Trigger: GGAGGCATTCCTAAGAGACCATCTTCTCCTGTGATA...ACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACAGGTTTCGTTGTCTTTaGAGACTGTGGATAAGCTTT +
Preference number: 4 (lower is better)
Translates to: QAASSSDLTISSFTGSPNRFRCL*RLWISF
Trigger: AAAGCTTATCCACAGTCTCCAAAGACAACGAAACCT...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGCAGCATGCTTCTCGCTaGCATGCTTGTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKQHASR*HACPLH
Trigger: ATGTAGTGGACAAGCATGCCAGCGAGAAGCATGCTG...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp ATGAAGATTTTAAGGTGTGACACGAAAGAGTCCTTGCTAGATTCAGTTGCCCATGCTGGACCCCCACTTTaGGGTCTTCTTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: MKILRCDTKESLLDSVAHAGPPL*GLLSSL
Trigger: AAGTGAAGAAAGAAGACCCCAAAGTGGGGGTCCAGC...ATGGGCAACTGAATCTAGCAAGGACTCTTTCGTGTCACACCTTAAAATCTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp GAAACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGAATGAGTCCCCCAGCTaGCTTAAGCCCATTAGAGAA +
Preference number: 4 (lower is better)
Translates to: ETLLKPSKVKVSRFLPRVNESPS*LKPIRE
Trigger: TTCTCTAATGGGCTTAAGCCAGCTGGGGGACTCATT...CACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp GACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTAATGAGTCCCCCAGCTaGCTTAAGCCCATTAGAGAA +
Preference number: 4 (lower is better)
Translates to: DYQQLYGFSKHLLLKGCCNESPS*LKPIRE
Trigger: TTCTCTAATGGGCTTAAGCCAGCTGGGGGACTCATT...ACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCATGCATTTCTGCAGGTaGCAAAGCTTAACAACAATT +
Preference number: 4 (lower is better)
Translates to: AASSSDLTISSFTGSPNTMHFCR*QSLTTI
Trigger: AATTGTTGTTAAGCTTTGCCACCTGCAGAAATGCAT...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp TACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGGCACCCAGAAGAATAATGTaGGGCAATGCATTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: YYFNPRRIMWGNAFLQVAPRRIM*GNAFLQ
Trigger: CTGCAGAAATGCATTGCCCCACATTATTCTTCTGGG...TGCCACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGAGCCACTCCATGGTCTaGAGTGACTACAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKSHSMV*SDYSMK
Trigger: CTTCATGCTGTAGTCACTCCAGACCATGGAGTGGCT...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp GACATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCTGGAAAGCCACTCCATaGTCTGGAGTGACTACAGCA +
Preference number: 4 (lower is better)
Translates to: DILPRNTVTFRANNLGSSWKATP*SGVTTA
Trigger: TGCTGTAGTCACTCCAGACCATGGAGTGGCTTTCCA...GCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp ATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGATACTGGGTCCAATGTaGGCCCCCTATTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: IRMVIKRIAEPVTQVIQRILGPM*APYCFR
Trigger: TCTGAAACAATAGGGGGCCCACATTGGACCCAGTAT...CCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp ACTTACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGCAGTATTTGCCGAGATaGACAGCACCGCATTATGTG +
Preference number: 4 (lower is better)
Translates to: TYYFNPRRIMWGNAFLQVQYLPR*TAPHYV
Trigger: CACATAATGCGGTGCTGTCCATCTCGGCAAATACTG...CACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp GAATGCTATGGTTTTTGTTTGCGCCTGGTTTTATTAAAGCTGGGCAAACACAGGAGCCAGACCATGCTATaGTTTCTGTGTGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: ECYGFCLRLVLLKLGKHRSQTML*FLCACH
Trigger: ATGACAGGCACACAGAAACCATAGCATGGTCTGGCT...CCTGTGTTTGCCCAGCTTTAATAAAACCAGGCGCAAACAAAAACCATAGCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp TACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGGCATCACCATGGTCACAATaGTGCTGTGAGGTACAACAA +
Preference number: 4 (lower is better)
Translates to: YYFNPRRIMWGNAFLQVASPWSQ*CCEVQQ
Trigger: TTGTTGTACCTCACAGCACCATTGTGACCATGGTGA...TGCCACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGAAGAGGAGCTCGGTCTaGGGAATAGGATATTGCCAC +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKKRSSV*GIGYCH
Trigger: GTGGCAATATCCTATTCCCCAGACCGAGCTCCTCTT...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452324.3
3UTR CAA 72 bp CTACCTAGGAATACAGTTACATTCCGAGCTAATAATTaGGGATCCAGCGGTAAGGGTGACAGAAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPRNTVTFRANN*GSSGKGDRSFF
Trigger: GAAGAAGCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp TCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAATCATCCAGGCTATTTaGTTTCCCATCAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: SNFGNKNGYKANCRASHSIIQAI*FPIKGI
Trigger: GATGCCCTTGATGGGAAATCAAATAGCCTGGATGAT...TGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTCTCACATCCATAGACTaGACTTCTTCAGTTGAATCA +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFLTSID*TSSVES
Trigger: TGATTCAACTGAAGAAGTTCAGTCTATGGATGTGAG...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp CTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGATGTCGGGGGACCAGTaGAATCTAAGAGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: LPRNTVTFRANNLGSSGKMSGDQ*NLRDLE
Trigger: TTCAAGATCTCTTAGATTTCACTGGTCCCCCGACAT...CTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp GACATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCTACAGTCGTCCAGGCTaGGATTTTCACTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: DILPRNTVTFRANNLGSSYSRPG*DFHWIS
Trigger: AGAGATCCAGTGAAAATCTCAGCCTGGACGACTGTA...GCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp TGTTTATGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGGTCAACAGAAGGTGTTaGGAGGAGTTTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: CLCAPTLGIRMVIKRIAEVNRRC*EEFLGQ
Trigger: CTGGCCAAGAAACTCCTCTCAACACCTTCTGTTGAC...CTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACATAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp TGGTCACAATGGTGCTGTGAGGTACAACAAATCACAAGAAAACAGACATTTAGCCTAGTAGCTCGGATTTaGCTATCAGCAGCTTTACGG +
Preference number: 4 (lower is better)
Translates to: WSQWCCEVQQITRKQTFSLVARI*LSAALR
Trigger: CCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAG...GCTAAATGTCTGTTTTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp CTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTTCTTTGGCCAATCTCTaGCTCTCATCTGATTTCAAA +
Preference number: 4 (lower is better)
Translates to: LLQAASSSDLTISSFTGSSLANL*LSSDFK
Trigger: TTTGAAATCAGATGAGAGGCAGAGATTGGCCAAAGA...AGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp TGTTTATGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCATCGCTCCTCCATTTaGTTTTCGTACTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: CLCAPTLGIRMVIKRIAEHRSSI*FSYCSL
Trigger: CAGGCTGCAGTACGAAAAGCAAATGGAGGAGCGATG...CTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACATAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp ACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTTCCAATGGCCAGTGGTaGTCCCCACGAATACTTCTT +
Preference number: 4 (lower is better)
Translates to: TQVIQRVTMIIEKFRKCFSNGQW*SPRILL
Trigger: AAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGA...AAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GACATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCACTGAATCATTGGCCTaGCCAGAGAGCATGACTGAA +
Preference number: 4 (lower is better)
Translates to: DILPRNTVTFRANNLGSSTESLA*PESMTE
Trigger: TTCAGTCATGCTCTCTGGGCAGGCCAATGATTCAGT...GCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS-3UTR GCA 90 bp GAAACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGCTCTCCTGCTCAATCTaGAGCATAATCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ETLLKPSKVKVSRFLPRVLSCSI*SIICSL
Trigger: GAGAGAACAGATTATGCTGCAGATTGAGCAGGAGAG...CACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp CAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTCTCCTGCTCAATCTaGAGCATAATCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QGESFKVSTKSGQCLTYYLSCSI*SIICSL
Trigger: GAGAGAACAGATTATGCTGCAGATTGAGCAGGAGAG...GTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp CTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGCTCTCCTGCTCAATCTaGAGCATAATCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LPRNTVTFRANNLGSSGKLSCSI*SIICSL
Trigger: GAGAGAACAGATTATGCTGCAGATTGAGCAGGAGAG...CTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGACTCTCCAGTCTCTCCTaGTCAATCTGCAGCATAATC +
Preference number: 4 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGLSSLS*SICSII
Trigger: GATTATGCTGCAGATTGAGCAGGAGAGACTGGAGAG...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp AGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGGGTTATAAAGCGAATTaGCGAGCCAGTCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: SHSGYSEGHYDNREVQEVGYKAN*RASHSG
Trigger: ACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACC...CACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCAATAATGTGGGGCAATaGATTTCTGCAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVNNVGQ*ISAGGK
Trigger: TTTGCCACCTGCAGAAATGCATTGCCCCACATTATT...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp CTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCATTTGTATCTCCTGGTTaGAAACCTCTCTCAGAATTA +
Preference number: 4 (lower is better)
Translates to: LQAASSSDLTISSFTGSPFVSPG*KPLSEL
Trigger: TAATTCTGAGAGAGGTTTGCAACCAGGAGATACAAA...TGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp CTATGGTTTCTGTGTGCCTGTCATAAAGGGACTTGGCCAGTATTTGCCGAGATGTTTGTATCTCCTGGTTaGAAACCTCTCTCAGAATTA +
Preference number: 4 (lower is better)
Translates to: LWFLCACHKGTWPVFAEMFVSPG*KPLSEL
Trigger: TAATTCTGAGAGAGGTTTGCAACCAGGAGATACAAA...CATCTCGGCAAATACTGGCCAAGTCCCTTTATGACAGGCACACAGAAACCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp TCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCACCATGGTCACAATGGTaGTGTGAGGTACAACAAATC +
Preference number: 4 (lower is better)
Translates to: SNFGNKNGYKANCRASHSPWSQW*CEVQQI
Trigger: GATTTGTTGTACCTCACAGCACCATTGTGACCATGG...TGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp TGTTTATGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGACAGGCGTTTATTCATaGGAGGCTCCGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: CLCAPTLGIRMVIKRIAETGVYS*EAPLAL
Trigger: CAAAGCCAACGGAGCCTCCCATGAATAAACGCCTGT...CTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACATAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp CATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCTTCTTCATCTCAATGTTTCGAGTaGGTGAAGACTTGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: HSELIIWDPAVRVTEASSSQCFE*VKTCKK
Trigger: CTTCTTACAAGTCTTCACCCACTCGAAACATTGAGA...TGAAGAAGCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp ACTGCTTTCCAACAGAGAAACTCTGGAGATGGGGAACCTCCTGAATTTCTTCTCAGGTTTCGTTGTCTTTaGAGACTGTGGATAAGCTTT +
Preference number: 4 (lower is better)
Translates to: TAFQQRNSGDGEPPEFLLRFRCL*RLWISF
Trigger: AAAGCTTATCCACAGTCTCCAAAGACAACGAAACCT...GAGAAGAAATTCAGGAGGTTCCCCATCTCCAGAGTTTCTCTGTTGGAAAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp CTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTAGGTTTCGTTGTCTTTaGAGACTGTGGATAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LLQAASSSDLTISSFTGSRFRCL*RLWISF
Trigger: AAAGCTTATCCACAGTCTCCAAAGACAACGAAACCT...AGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp TTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTTACCAGTTCCATTTTaGTCCAGAGACACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FDYQQLYGFSKHLLLKGCLPVPF*SRDTPG
Trigger: TCCTGGGGTGTCTCTGGACCAAAATGGAACTGGTAA...GCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp CTTCTACACAGGTTTTTAAAAGCCTGGTTTGGTTTCAGCACATTGAGCTTACAGTCCGAGCTAATAATTTaGGATCCAGCGGTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: LLHRFLKAWFGFSTLSLQSELII*DPAVRV
Trigger: CACCCTTACCGCTGGATCCCAAATTATTAGCTCGGA...CTGTAAGCTCAATGTGCTGAAACCAAACCAGGCTTTTAAAAACCTGTGTAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp AGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGTCCGAGCTAATAATTTaGGATCCAGCGGTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SHSGYSEGHYDNREVQEVSELII*DPAVRV
Trigger: CACCCTTACCGCTGGATCCCAAATTATTAGCTCGGA...CACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCTGTTTCAGAATGCTATaGTTTTTGTTTGCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSCFRML*FLFAPG
Trigger: ACCAGGCGCAAACAAAAACCATAGCATTCTGAAACA...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp ACTTACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGTGTCATAAAGGGACTTaGCCAGTATTTGCCGAGATG +
Preference number: 4 (lower is better)
Translates to: TYYFNPRRIMWGNAFLQVCHKGT*PVFAEM
Trigger: CATCTCGGCAAATACTGGCCAAGTCCCTTTATGACA...CACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp TTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCAGCCAGACCATGCTATaGTTTCTGTGTGCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FDYQQLYGFSKHLLLKGCSQTML*FLCACH
Trigger: ATGACAGGCACACAGAAACCATAGCATGGTCTGGCT...GCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp GAATGCTATGGTTTTTGTTTGCGCCTGGTTTTATTAAAGCTGGGCAAACACAGGATGGAATACTCGGTCTaGGGAATAGGATATTGCCAC +
Preference number: 4 (lower is better)
Translates to: ECYGFCLRLVLLKLGKHRMEYSV*GIGYCH
Trigger: GTGGCAATATCCTATTCCCCAGACCGAGTATTCCAT...CCTGTGTTTGCCCAGCTTTAATAAAACCAGGCGCAAACAAAAACCATAGCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379651.7
CDS-3UTR CCA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTAAAACGAGGACAGACATaGAATACTCGGTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLKRGQT*NTRSGE
Trigger: TTCCCCAGACCGAGTATTCCATGTCTGTCCTCGTTT...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379651.7
CDS-3UTR TCA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTATATTGCCACGGTGGATaGAGACAGGCGTTTATTCAT +
Preference number: 4 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLYCHGG*RQAFIH
Trigger: ATGAATAAACGCCTGTCTTCATCCACCGTGGCAATA...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp GAAACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGAATGTTTCGAGTGGGTaGAGACTTGTAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: ETLLKPSKVKVSRFLPRVNVSSG*RLVRRV
Trigger: AACCCTTCTTACAAGTCTTCACCCACTCGAAACATT...CACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATAATGTTTCGAGTGGGTaGAGACTTGTAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYNVSSG*RLVRRV
Trigger: AACCCTTCTTACAAGTCTTCACCCACTCGAAACATT...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp AGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGATCATCCAGGCTATTTaGTTTCCCATCAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: SHSGYSEGHYDNREVQEVIIQAI*FPIKGI
Trigger: GATGCCCTTGATGGGAAATCAAATAGCCTGGATGAT...CACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp TTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCATCATCCAGGCTATTTaGTTTCCCATCAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: FDYQQLYGFSKHLLLKGCIIQAI*FPIKGI
Trigger: GATGCCCTTGATGGGAAATCAAATAGCCTGGATGAT...GCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCGATAAGCTCTTCTTTTaGAACAGGACTCACATCCAT +
Preference number: 4 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVDKLFF*NRTHIH
Trigger: ATGGATGTGAGTCCTGTTTCAAAAGAAGAGCTTATC...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGATGTCGGGGGACCAGTaGAATCTAAGAGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKMSGDQ*NLRDLE
Trigger: TTCAAGATCTCTTAGATTTCACTGGTCCCCCGACAT...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGAATGTCGGGGGACCAGTaGAATCTAAGAGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGMSGDQ*NLRDLE
Trigger: TTCAAGATCTCTTAGATTTCACTGGTCCCCCGACAT...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTACTCCATGGTCTGGAGTaGCTACAGCATGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLLHGLE*LQHEDF
Trigger: AAAATCTTCATGCTGTAGTCACTCCAGACCATGGAG...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp ATGAAGATTTTAAGGTGTGACACGAAAGAGTCCTTGCTAGATTCAGTTGCCCATCTCCATGGTCTGGAGTaGCTACAGCATGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: MKILRCDTKESLLDSVAHLHGLE*LQHEDF
Trigger: AAAATCTTCATGCTGTAGTCACTCCAGACCATGGAG...ATGGGCAACTGAATCTAGCAAGGACTCTTTCGTGTCACACCTTAAAATCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp ATGAGGCATCACCATGGTCACAATGGTGCTGTGAGGTACAACAAATCACAAGAAAGGCATGTACTTTATTaGGTAGAGACACATACACAG +
Preference number: 4 (lower is better)
Translates to: MRHHHGHNGAVRYNKSQERHVLY*VETHTQ
Trigger: CTGTGTATGTGTCTCTACTCAATAAAGTACATGCCT...TTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCATGGTGATGCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp AAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGTAGGCATGTACTTTATTaGGTAGAGACACATACACAG +
Preference number: 4 (lower is better)
Translates to: KNGYKANCRASHSGYSEGRHVLY*VETHTQ
Trigger: CTGTGTATGTGTCTCTACTCAATAAAGTACATGCCT...ACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp ATGAGGCATCACCATGGTCACAATGGTGCTGTGAGGTACAACAAATCACAAGAATCTTTGGCCAATCTCTaGCTCTCATCTGATTTCAAA +
Preference number: 4 (lower is better)
Translates to: MRHHHGHNGAVRYNKSQESLANL*LSSDFK
Trigger: TTTGAAATCAGATGAGAGGCAGAGATTGGCCAAAGA...TTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCATGGTGATGCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGTTTCCCAACATCTCCTaGACCAGATGTAGACGTAGA +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKFPNIS*TRCRRR
Trigger: TCTACGTCTACATCTGGTGCAGGAGATGTTGGGAAA...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATTTCCCAACATCTCCTaGACCAGATGTAGACGTAGA +
Preference number: 4 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGFPNIS*TRCRRR
Trigger: TCTACGTCTACATCTGGTGCAGGAGATGTTGGGAAA...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR GCA 90 bp CTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTCTTGCTAGATTCAGTTaGCCATGTATACACGAATAT +
Preference number: 4 (lower is better)
Translates to: LKPSKVKVSRFLPRVASVLARFS*PCIHEY
Trigger: ATATTCGTGTATACATGGGCAACTGAATCTAGCAAG...AACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp ATGAAGATTTTAAGGTGTGACACGAAAGAGTCCTTGCTAGATTCAGTTGCCCATTTTCGTACTGCAGCCTaGCTCTTTTCTGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: MKILRCDTKESLLDSVAHFRTAA*LFSVSP
Trigger: TGGAGAAACAGAAAAGAGCCAGGCTGCAGTACGAAA...ATGGGCAACTGAATCTAGCAAGGACTCTTTCGTGTCACACCTTAAAATCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGAAGGATATTGCCACGGTaGATGAAGACAGGCGTTTAT +
Preference number: 4 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGRILPR*MKTGVY
Trigger: ATAAACGCCTGTCTTCATCCACCGTGGCAATATCCT...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000452324.3
CDS-3UTR CCA 90 bp TCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTATGTGATGAGCTCGGTCTaGGGAATAGGATATTGCCAC +
Preference number: 4 (lower is better)
Translates to: SGYSEGHYDNREVQEVLYVMSSV*GIGYCH
Trigger: GTGGCAATATCCTATTCCCCAGACCGAGCTCATCAC...ATAAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS-3UTR CCA 90 bp GAATGCTATGGTTTTTGTTTGCGCCTGGTTTTATTAAAGCTGGGCAAACACAGGAAACGAGGACAGACATaGAATACTGAATCATTGGCC +
Preference number: 4 (lower is better)
Translates to: ECYGFCLRLVLLKLGKHRKRGQT*NTESLA
Trigger: GGCCAATGATTCAGTATTCCATGTCTGTCCTCGTTT...CCTGTGTTTGCCCAGCTTTAATAAAACCAGGCGCAAACAAAAACCATAGCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS-3UTR CCA 90 bp TACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGGCATGTCTTTGGAGACTGTaGATAAGCTTTAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: YYFNPRRIMWGNAFLQVACLWRL*ISFSSC
Trigger: ACAGCTACTAAAGCTTATCCACAGTCTCCAAAGACA...TGCCACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp TCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTATCAGCATGCTTCTCGCTaGCATGCTTGTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: SGYSEGHYDNREVQEVLYQHASR*HACPLH
Trigger: ATGTAGTGGACAAGCATGCCAGCGAGAAGCATGCTG...ATAAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTTCTTTCTTCACTTGTaGAGACACATCACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFFFLHL*RHITFP
Trigger: AGGAAAAGTGATGTGTCTCCACAAGTGAAGAAAGAA...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp GAATGCTATGGTTTTTGTTTGCGCCTGGTTTTATTAAAGCTGGGCAAACACAGGTTGAGAGGAGTTTCTTaGCCAGGACTGTTAAATCCT +
Preference number: 4 (lower is better)
Translates to: ECYGFCLRLVLLKLGKHRLRGVS*PGLLNP
Trigger: AGGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAA...CCTGTGTTTGCCCAGCTTTAATAAAACCAGGCGCAAACAAAAACCATAGCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp GACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTTTGAGAGGAGTTTCTTaGCCAGGACTGTTAAATCCT +
Preference number: 4 (lower is better)
Translates to: DYQQLYGFSKHLLLKGCCLRGVS*PGLLNP
Trigger: AGGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAA...ACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp ACTTACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGCTTCTTTGTATCTCCTaGTTGCAAACCTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: TYYFNPRRIMWGNAFLQVLLCIS*LQTSLR
Trigger: TCTGAGAGAGGTTTGCAACCAGGAGATACAAAGAAG...CACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp TTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTCATAAAGGGACTTaGCCAGTATTTGCCGAGATG +
Preference number: 4 (lower is better)
Translates to: FDYQQLYGFSKHLLLKGCCHKGT*PVFAEM
Trigger: CATCTCGGCAAATACTGGCCAAGTCCCTTTATGACA...GCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CAA 72 bp GAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTaGACATACTACCTAGGAATACAGTTACATTCCGAG +
Preference number: 4 (lower is better)
Translates to: ESFKVSTKSGQC*TYYLGIQLHSE
Trigger: CTCGGAATGTAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp ATGAAGATTTTAAGGTGTGACACGAAAGAGTCCTTGCTAGATTCAGTTGCCCATTCTCTGCCTCTCATCTaGTTTCAAAAATCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: MKILRCDTKESLLDSVAHSLPLI*FQKSLH
Trigger: ATGGAGGGATTTTTGAAATCAGATGAGAGGCAGAGA...ATGGGCAACTGAATCTAGCAAGGACTCTTTCGTGTCACACCTTAAAATCTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp GACATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCTCTCTGCCTCTCATCTaGTTTCAAAAATCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: DILPRNTVTFRANNLGSSSLPLI*FQKSLH
Trigger: ATGGAGGGATTTTTGAAATCAGATGAGAGGCAGAGA...GCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp GACATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCAATGTTTCGAGTGGGTaGAGACTTGTAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: DILPRNTVTFRANNLGSSNVSSG*RLVRRV
Trigger: AACCCTTCTTACAAGTCTTCACCCACTCGAAACATT...GCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp TCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCACTCACATCCATAGACTaGACTTCTTCAGTTGAATCA +
Preference number: 4 (lower is better)
Translates to: SNFGNKNGYKANCRASHSLTSID*TSSVES
Trigger: TGATTCAACTGAAGAAGTTCAGTCTATGGATGTGAG...TGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp ACTTACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGGATAAGCTCTTCTTTTaGAACAGGACTCACATCCAT +
Preference number: 4 (lower is better)
Translates to: TYYFNPRRIMWGNAFLQVDKLFF*NRTHIH
Trigger: ATGGATGTGAGTCCTGTTTCAAAAGAAGAGCTTATC...CACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTACATTTCACTCACTGGTaGAAATTCCGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLHFTHW*KFRDRD
Trigger: ATCTCTATCCCGGAATTTTCACCAGTGAGTGAAATG...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp ACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTATGTCGGGGGACCAGTaGAATCTAAGAGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: TQVIQRVTMIIEKFRKCFMSGDQ*NLRDLE
Trigger: TTCAAGATCTCTTAGATTTCACTGGTCCCCCGACAT...AAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp TACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGGCATTTTTAAAGGCTTCTTaGTACTGCTTTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: YYFNPRRIMWGNAFLQVAFLKAS*YCFPTE
Trigger: CTCTGTTGGAAAGCAGTATCAAGAAGCCTTTAAAAA...TGCCACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTAGAAGATTTTAAGGTGTaGCACGAAAGAGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLEDFKV*HERVLA
Trigger: AGCAAGGACTCTTTCGTGTCACACCTTAAAATCTTC...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp GAATGCTATGGTTTTTGTTTGCGCCTGGTTTTATTAAAGCTGGGCAAACACAGGGGCTGTAAAAGCACATaGACAAGATTACTACTGAGA +
Preference number: 4 (lower is better)
Translates to: ECYGFCLRLVLLKLGKHRGCKST*TRLLLR
Trigger: TCTCAGTAGTAATCTTGTTCATGTGCTTTTACAGCC...CCTGTGTTTGCCCAGCTTTAATAAAACCAGGCGCAAACAAAAACCATAGCATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp GAATGCTATGGTTTTTGTTTGCGCCTGGTTTTATTAAAGCTGGGCAAACACAGGTCTGCTGCTTCTTTCTaGTTTTCAATCATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ECYGFCLRLVLLKLGKHRSAASF*FSIMAF
Trigger: GAAAGCCATGATTGAAAAGCAGAAAGAAGCAGCAGA...CCTGTGTTTGCCCAGCTTTAATAAAACCAGGCGCAAACAAAAACCATAGCATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp ACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTAGGATATTGCCACGGTaGATGAAGACAGGCGTTTAT +
Preference number: 4 (lower is better)
Translates to: TQVIQRVTMIIEKFRKCFRILPR*MKTGVY
Trigger: ATAAACGCCTGTCTTCATCCACCGTGGCAATATCCT...AAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp ACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTTATCACAGGAGAAGATaGTCTCTTAGGAATGCCTCC +
Preference number: 4 (lower is better)
Translates to: TQVIQRVTMIIEKFRKCFYHRRR*SLRNAS
Trigger: GGAGGCATTCCTAAGAGACCATCTTCTCCTGTGATA...AAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp ACTTACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGTGTCTTTGGAGACTGTaGATAAGCTTTAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: TYYFNPRRIMWGNAFLQVCLWRL*ISFSSC
Trigger: ACAGCTACTAAAGCTTATCCACAGTCTCCAAAGACA...CACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp TCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTATTTACCAGTTCCATTTTaGTCCAGAGACACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SGYSEGHYDNREVQEVLYLPVPF*SRDTPG
Trigger: TCCTGGGGTGTCTCTGGACCAAAATGGAACTGGTAA...ATAAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp ATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTCTTCTTTGTATCTCCTaGTTGCAAACCTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: ILPRNTVTFRANNLGSSGLLCIS*LQTSLR
Trigger: TCTGAGAGAGGTTTGCAACCAGGAGATACAAAGAAG...ACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCTTTAAAAGCCTGGTTTaGTTTCAGCACATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVFKSLV*FQHIEL
Trigger: AAGCTCAATGTGCTGAAACCAAACCAGGCTTTTAAA...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGACTCACATCCATAGACTaGACTTCTTCAGTTGAATCA +
Preference number: 4 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGLTSID*TSSVES
Trigger: TGATTCAACTGAAGAAGTTCAGTCTATGGATGTGAG...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGATAAGCTCTTCTTTTaGAACAGGACTCACATCCAT +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKDKLFF*NRTHIH
Trigger: ATGGATGTGAGTCCTGTTTCAAAAGAAGAGCTTATC...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR TCA 90 bp CTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGAACAAGATTACTACTaGGACTTCTTTGTATCTCCT +
Preference number: 4 (lower is better)
Translates to: LPRNTVTFRANNLGSSGKEQDYY*DFFVSP
Trigger: AGGAGATACAAAGAAGTCTCAGTAGTAATCTTGTTC...CTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTATCTGCTGCTTCTTTCTaGTTTTCAATCATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLSAASF*FSIMAF
Trigger: GAAAGCCATGATTGAAAAGCAGAAAGAAGCAGCAGA...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp CAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCCTATTGTTTCAGAATaGTATGGTTTTTGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: QGESFKVSTKSGQCLTYYPIVSE*YGFCLR
Trigger: GCGCAAACAAAAACCATAGCATTCTGAAACAATAGG...GTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTATCTCAATGTTTCGAGTaGGTGAAGACTTGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLSQCFE*VKTCKK
Trigger: CTTCTTACAAGTCTTCACCCACTCGAAACATTGAGA...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGTCTCAATGTTTCGAGTaGGTGAAGACTTGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKSQCFE*VKTCKK
Trigger: CTTCTTACAAGTCTTCACCCACTCGAAACATTGAGA...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTATGTCTTTGGAGACTGTaGATAAGCTTTAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLCLWRL*ISFSSC
Trigger: ACAGCTACTAAAGCTTATCCACAGTCTCCAAAGACA...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGTCTTTGGAGACTGTaGATAAGCTTTAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGCLWRL*ISFSSC
Trigger: ACAGCTACTAAAGCTTATCCACAGTCTCCAAAGACA...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CCA 90 bp TGTTTATGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGTTGAGAGGAGTTTCTTaGCCAGGACTGTTAAATCCT +
Preference number: 4 (lower is better)
Translates to: CLCAPTLGIRMVIKRIAELRGVS*PGLLNP
Trigger: AGGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAA...CTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACATAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp TCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTATTCACCATGGTCACAATaGTGCTGTGAGGTACAACAA +
Preference number: 4 (lower is better)
Translates to: SGYSEGHYDNREVQEVLYSPWSQ*CCEVQQ
Trigger: TTGTTGTACCTCACAGCACCATTGTGACCATGGTGA...ATAAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
3UTR CAA 72 bp AGCATGAAGATTTTAAGGTGTGACACGAAAGAGTCCTaGCTAGATTCAGTTGCCCATGTATACACGAATATG +
Preference number: 4 (lower is better)
Translates to: SMKILRCDTKES*LDSVAHVYTNM
Trigger: CATATTCGTGTATACATGGGCAACTGAATCTAGCAAGGACTCTTTCGTGTCACACCTTAAAATCTTCATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp TGGTCACAATGGTGCTGTGAGGTACAACAAATCACAAGAAAACAGACATTTAGCTTTTTAAAGGCTTCTTaGTACTGCTTTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: WSQWCCEVQQITRKQTFSFLKAS*YCFPTE
Trigger: CTCTGTTGGAAAGCAGTATCAAGAAGCCTTTAAAAA...GCTAAATGTCTGTTTTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp TCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTATGAAGATTTTAAGGTGTaGCACGAAAGAGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SGYSEGHYDNREVQEVLYEDFKV*HERVLA
Trigger: AGCAAGGACTCTTTCGTGTCACACCTTAAAATCTTC...ATAAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGAGAACAAGATTACTACTaGGACTTCTTTGTATCTCCT +
Preference number: 4 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGEQDYY*DFFVSP
Trigger: AGGAGATACAAAGAAGTCTCAGTAGTAATCTTGTTC...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp ACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTTCTGCTGCTTCTTTCTaGTTTTCAATCATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: TQVIQRVTMIIEKFRKCFSAASF*FSIMAF
Trigger: GAAAGCCATGATTGAAAAGCAGAAAGAAGCAGCAGA...AAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR GCA 90 bp TTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCCTTGCTAGATTCAGTTaGCCATGTATACACGAATAT +
Preference number: 4 (lower is better)
Translates to: FDYQQLYGFSKHLLLKGCLARFS*PCIHEY
Trigger: ATATTCGTGTATACATGGGCAACTGAATCTAGCAAG...GCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp ATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTCCTATTGTTTCAGAATaGTATGGTTTTTGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: ILPRNTVTFRANNLGSSGPIVSE*YGFCLR
Trigger: GCGCAAACAAAAACCATAGCATTCTGAAACAATAGG...ACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp ATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTTTCTTTCTTCACTTGTaGAGACACATCACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ILPRNTVTFRANNLGSSGFFLHL*RHITFP
Trigger: AGGAAAAGTGATGTGTCTCCACAAGTGAAGAAAGAA...ACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp ATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTATGCATTTCTGCAGGTaGCAAAGCTTAACAACAATT +
Preference number: 4 (lower is better)
Translates to: ILPRNTVTFRANNLGSSGMHFCR*QSLTTI
Trigger: AATTGTTGTTAAGCTTTGCCACCTGCAGAAATGCAT...ACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CCA 90 bp CTTCTACACAGGTTTTTAAAAGCCTGGTTTGGTTTCAGCACATTGAGCTTACAGTTTAAAAGCCTGGTTTaGTTTCAGCACATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LLHRFLKAWFGFSTLSLQFKSLV*FQHIEL
Trigger: AAGCTCAATGTGCTGAAACCAAACCAGGCTTTTAAA...CTGTAAGCTCAATGTGCTGAAACCAAACCAGGCTTTTAAAAACCTGTGTAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR TCA 90 bp TCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTATGATAAGCTCTTCTTTTaGAACAGGACTCACATCCAT +
Preference number: 4 (lower is better)
Translates to: SGYSEGHYDNREVQEVLYDKLFF*NRTHIH
Trigger: ATGGATGTGAGTCCTGTTTCAAAAGAAGAGCTTATC...ATAAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR TCA 90 bp TCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTATGGCTGTAAAAGCACATaGACAAGATTACTACTGAGA +
Preference number: 4 (lower is better)
Translates to: SGYSEGHYDNREVQEVLYGCKST*TRLLLR
Trigger: TCTCAGTAGTAATCTTGTTCATGTGCTTTTACAGCC...ATAAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR GCA 90 bp TCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTATTCTTTGGCCAATCTCTaGCTCTCATCTGATTTCAAA +
Preference number: 4 (lower is better)
Translates to: SGYSEGHYDNREVQEVLYSLANL*LSSDFK
Trigger: TTTGAAATCAGATGAGAGGCAGAGATTGGCCAAAGA...ATAAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp TCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTATAGGTTTCGTTGTCTTTaGAGACTGTGGATAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SGYSEGHYDNREVQEVLYRFRCL*RLWISF
Trigger: AAAGCTTATCCACAGTCTCCAAAGACAACGAAACCT...ATAAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CCA 90 bp TGTTTATGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGTTCTTTCTTCACTTGTaGAGACACATCACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: CLCAPTLGIRMVIKRIAEFFLHL*RHITFP
Trigger: AGGAAAAGTGATGTGTCTCCACAAGTGAAGAAAGAA...CTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACATAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
3UTR CAA 72 bp CAGGAAAAGACATCTAAATGTTTATGTGCTCCAACTTaGGGAATAAGAATGGTTATAAAGCGAATTGCCGAG +
Preference number: 4 (lower is better)
Translates to: QEKTSKCLCAPT*GIRMVIKRIAE
Trigger: CTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACATAAACATTTAGATGTCTTTTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS CCA 90 bp GTTGGGCTGAGAGGTCCGCACCGCGCCCGGTTCTGCGATCTTCCCTaGGAGAGAGGTTCCCCGCGCAGTCCCCTCAGGCCGGGATCCCGT +
Preference number: 5 (lower is better)
Translates to: VGLRGPHRARFCDLP*ERGSPRSPLRPGSR
Trigger: ACGGGATCCCGGCCTGAGGGGACTGCGCGGGGAACCTCTCTCCCAGGGAAGATCGCAGAACCGGGCGCGGTGCGGACCTCTCAGCCCAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS GCA 90 bp TTGAGGCCGGTAGTTGGGCTGAGAGGTCCGCACCGCGCCCGGTTCTaGGATCTTCCCTGGGAGAGAGGTTCCCCGCGCAGTCCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LRPVVGLRGPHRARF*DLPWERGSPRSPLR
Trigger: CCTGAGGGGACTGCGCGGGGAACCTCTCTCCCAGGGAAGATCGCAGAACCGGGCGCGGTGCGGACCTCTCAGCCCAACTACCGGCCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS CCA 90 bp CCCAAGAAAGAACCCCGCCACTCGCACAGAGAGGGGTGCGGCCCTTaGATGCACGTCCGGACGATCCTGGGCCAGGGAAAGGGCGTTTAT +
Preference number: 5 (lower is better)
Translates to: PKKEPRHSHREGCGP*MHVRTILGQGKGVY
Trigger: ATAAACGCCCTTTCCCTGGCCCAGGATCGTCCGGACGTGCATCCAAGGGCCGCACCCCTCTCTGTGCGAGTGGCGGGGTTCTTTCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS GCA 90 bp ATGGCCAGTGGTGCTCCCCACGAATACTTCTTTTTCAGCTCCAGCTaGTGTGTGCGCTCCAGGGACCGGCGCATCATCGCCTCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: MASGAPHEYFFFSSS*CVRSRDRRIIASSR
Trigger: ACGGCTGGAGGCGATGATGCGCCGGTCCCTGGAGCGCACACAGCAGCTGGAGCTGAAAAAGAAGTATTCGTGGGGAGCACCACTGGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS GCA 90 bp TGCTGTGGGCTTCCCCAAGGCTGCGCTGTTTTCGGCTTTCCCTCCTaGGGCAGCAGCATGCTTCTCGCTGGCATGCTTGTCCACTACATG +
Preference number: 5 (lower is better)
Translates to: CCGLPQGCAVFGFPS*GSSMLLAGMLVHYM
Trigger: CATGTAGTGGACAAGCATGCCAGCGAGAAGCATGCTGCTGCCGCAGGAGGGAAAGCCGAAAACAGCGCAGCCTTGGGGAAGCCCACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
ENST00000466145.1
CDS GCA 90 bp AGGGCCAAGAGGAGCATCATGTCCTCCGGGTCCAATGGCCAGTGGTaGTCCCCACGAATACTTCTTTTTCAGCTCCAGCTGCTGTGTGCG +
Preference number: 5 (lower is better)
Translates to: RAKRSIMSSGSNGQW*SPRILLFQLQLLCA
Trigger: CGCACACAGCAGCTGGAGCTGAAAAAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGACCCGGAGGACATGATGCTCCTCTTGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443379.7
CDS GCA 90 bp AGAGGGGACCCGAAGTTCACAACAGGAAGAGAAGTTGCTGTTCGTTaGCCCCGCTTCACCTTCTCCACCAGAGAGGCCTCTCCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: RGDPKFTTGREVAVR*PRFTFSTREASPPE
Trigger: TTCAGGAGGAGAGGCCTCTCTGGTGGAGAAGGTGAAGCGGGGGCAACGAACAGCAACTTCTCTTCCTGTTGTGAACTTCGGGTCCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CCA 90 bp AAGAGGGCCAAGAGGAGCATCATGTCCTCCGGGTCCAATGGCCAGTaGTGCTCCCCACGAATACTTCTTTTTCAGCTCCAGCTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: KRAKRSIMSSGSNGQ*CSPRILLFQLQLLC
Trigger: ACACAGCAGCTGGAGCTGAAAAAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGACCCGGAGGACATGATGCTCCTCTTGGCCCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443379.7
CDS CCA 90 bp GAGGGCCAAGAGGAGCTCGGTCTGGGGAATAGGATATTGCCACGGTaGATGAAGACAGGCGTTTATTCATGGGAGGCTCCGTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: EGQEELGLGNRILPR*MKTGVYSWEAPLAL
Trigger: CAAAGCCAACGGAGCCTCCCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGCTCCTCTTGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS-3UTR CAA 90 bp CTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAGAGGGGTGCGGCCCTaGGATGCACGTCCGGACGAT +
Preference number: 5 (lower is better)
Translates to: LQAASSSDLTISSFTGSPRGVRP*DARPDD
Trigger: ATCGTCCGGACGTGCATCCAAGGGCCGCACCCCTCT...TGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS TCA 90 bp GCCAAGAGGAGCTCGGTCTGGGGAATAGGATATTGCCACGGTGGATaGAGACAGGCGTTTATTCATGGGAGGCTCCGTTGGCTTTGGCAA +
Preference number: 5 (lower is better)
Translates to: AKRSSVWGIGYCHGG*RQAFIHGRLRWLWQ
Trigger: TTGCCAAAGCCAACGGAGCCTCCCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGCTCCTCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS CCA 90 bp TCCTTGTTGCTCTTCTCTTTCTCCGCTTTCCTCTTGGGCATGTCTTaGCCAGAAAGGGCAGGTAAGCGGTACTTCACAGGAGACCCTGGG +
Preference number: 5 (lower is better)
Translates to: SLLLFSFSAFLLGMS*PERAGKRYFTGDPG
Trigger: CCCAGGGTCTCCTGTGAAGTACCGCTTACCTGCCCTTTCTGGCCAAGACATGCCCAAGAGGAAAGCGGAGAAAGAGAAGAGCAACAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
ENST00000466145.1
CDS GCA 90 bp AAGTTTGTCACATGCATCATGTCCTCCGGGTCCAATGGCCAGTGGTaGTCCCCACGAATACTTCTTTTTCAGCTCCAGCTGCTGTGTGCG +
Preference number: 5 (lower is better)
Translates to: KFVTCIMSSGSNGQW*SPRILLFQLQLLCA
Trigger: CGCACACAGCAGCTGGAGCTGAAAAAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGACCCGGAGGACATGATGCATGTGACAAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000452324.3
CDS CCA 90 bp GGTGCATGTGATGAGCTCGGTCTGGGGAATAGGATATTGCCACGGTaGATGAAGACAGGCGTTTATTCATGGGAGGCTCCGTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: GACDELGLGNRILPR*MKTGVYSWEAPLAL
Trigger: CAAAGCCAACGGAGCCTCCCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGCTCATCACATGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS TCA 90 bp CATGTGATGAGCTCGGTCTGGGGAATAGGATATTGCCACGGTGGATaGAGACAGGCGTTTATTCATGGGAGGCTCCGTTGGCTTTGGCAA +
Preference number: 5 (lower is better)
Translates to: HVMSSVWGIGYCHGG*RQAFIHGRLRWLWQ
Trigger: TTGCCAAAGCCAACGGAGCCTCCCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGCTCATCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS-3UTR CAA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACAAATCCCTCCATGCCTaGAGGCCGGTAGTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: QAASSSDLTISSFTGSPNKSLHA*RPVVGL
Trigger: CAGCCCAACTACCGGCCTCAAGGCATGGAGGGATTT...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTCTCCAGGATCTGTaGCTCCCGAGCAGCCAGACA +
Preference number: 5 (lower is better)
Translates to: AASSSDLTISSFTGSPNTFLQDL*LPSSQT
Trigger: TGTCTGGCTGCTCGGGAGCAACAGATCCTGGAGAAA...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS TCA 90 bp GACATGGAATACTCGGTCTGGGGAATAGGATATTGCCACGGTGGATaGAGACAGGCGTTTATTCATGGGAGGCTCCGTTGGCTTTGGCAA +
Preference number: 5 (lower is better)
Translates to: DMEYSVWGIGYCHGG*RQAFIHGRLRWLWQ
Trigger: TTGCCAAAGCCAACGGAGCCTCCCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGTATTCCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379651.7
CDS CCA 90 bp GACAGACATGGAATACTCGGTCTGGGGAATAGGATATTGCCACGGTaGATGAAGACAGGCGTTTATTCATGGGAGGCTCCGTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: DRHGILGLGNRILPR*MKTGVYSWEAPLAL
Trigger: CAAAGCCAACGGAGCCTCCCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGTATTCCATGTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379651.7
CDS-3UTR CAA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCCTTCTCCAGTCGTTCTaGCTCCTCCTGTTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: AASSSDLTISSFTGSPNTLLQSF*LLLFLL
Trigger: CAGAAGGAACAGGAGGAGCAAGAACGACTGGAGAAG...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp TCCAATGTGGGCCCCCTATTGTTTCAGAATGCTATGGTTTTTGTTTGCGCCTGGGGCTGGACCCCCACTTaGGGGTCTTCTTTCTTCACT +
Preference number: 5 (lower is better)
Translates to: SNVGPLLFQNAMVFVCAWGWTPT*GSSFFT
Trigger: AGTGAAGAAAGAAGACCCCAAAGTGGGGGTCCAGCC...CCAGGCGCAAACAAAAACCATAGCATTCTGAAACAATAGGGGGCCCACATTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp ACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCGGACTTGGCCAGTATTaGCCGAGATGGACAGCACCG +
Preference number: 5 (lower is better)
Translates to: TLLKPSKVKVSRFLPRVAGLGQY*PRWTAP
Trigger: CGGTGCTGTCCATCTCGGCAAATACTGGCCAAGTCC...GGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS TCA 90 bp GAGGACAGACATGGAATACTGAATCATTGGCCTGCCCAGAGAGCATaGCTGAAGCTCTGCTTCTGGCTAAAGAAGACTGTGTGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: EDRHGILNHWPAQRA*LKLCFWLKKTVWVS
Trigger: TGACACCCACACAGTCTTCTTTAGCCAGAAGCAGAGCTTCAGTCATGCTCTCTGGGCAGGCCAATGATTCAGTATTCCATGTCTGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS CCA 90 bp GCGGTACTTCACAGGAGACCCTGGGTAGGGAGGTTTCGTTGTCTTTaGAGACTGTGGATAAGCTTTAGTAGCTGTCTTGGATATCACAGG +
Preference number: 5 (lower is better)
Translates to: AVLHRRPWVGRFRCL*RLWISFSSCLGYHR
Trigger: CCTGTGATATCCAAGACAGCTACTAAAGCTTATCCACAGTCTCCAAAGACAACGAAACCTCCCTACCCAGGGTCTCCTGTGAAGTACCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CGAGCCAGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGAAATCCCTCCATGCCTaGAGGCCGGTAGTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: RASHSGYSEGHYDNREVQKSLHA*RPVVGL
Trigger: CAGCCCAACTACCGGCCTCAAGGCATGGAGGGATTT...CTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACTGGCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCACCATCGCTCCTCCATTaGCTTTTCGTACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LQAASSSDLTISSFTGSPPSLLH*LFVLQP
Trigger: AGGCTGCAGTACGAAAAGCAAATGGAGGAGCGATGG...TGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCTTCTTCAAGAAGTTGCTGTTCGTaGCCCCCGCTTCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: HSELIIWDPAVRVTEASSRSCCS*PPLHLL
Trigger: GAGAAGGTGAAGCGGGGGCAACGAACAGCAACTTCT...TGAAGAAGCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTCTCGCTGGCATGCTaGTCCACTACATGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: AASSSDLTISSFTGSPNTFSLAC*STTCFS
Trigger: AGAGAAGCATGTAGTGGACAAGCATGCCAGCGAGAA...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CTATGGTTTCTGTGTGCCTGTCATAAAGGGACTTGGCCAGTATTTGCCGAGATGCTTCTCCAGTCGTTCTaGCTCCTCCTGTTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: LWFLCACHKGTWPVFAEMLLQSF*LLLFLL
Trigger: CAGAAGGAACAGGAGGAGCAAGAACGACTGGAGAAG...CATCTCGGCAAATACTGGCCAAGTCCCTTTATGACAGGCACACAGAAACCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCGGCTGGACCCCCACTTaGGGGTCTTCTTTCTTCACT +
Preference number: 5 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSGWTPT*GSSFFT
Trigger: AGTGAAGAAAGAAGACCCCAAAGTGGGGGTCCAGCC...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTGGCTGGACCCCCACTTaGGGGTCTTCTTTCTTCACT +
Preference number: 5 (lower is better)
Translates to: LKPSKVKVSRFLPRVASVGWTPT*GSSFFT
Trigger: AGTGAAGAAAGAAGACCCCAAAGTGGGGGTCCAGCC...AACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTGGCTGGACCCCCACTTaGGGGTCTTCTTTCTTCACT +
Preference number: 5 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFGWTPT*GSSFFT
Trigger: AGTGAAGAAAGAAGACCCCAAAGTGGGGGTCCAGCC...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CCA 90 bp AGACTGTGTGGGTGTCAACAGTCGCGAAACAAGAATGGCTTCCATTaGACTAAGGTGCATGTGATGAGCTCGGTCTGGGGAATAGGATAT +
Preference number: 5 (lower is better)
Translates to: RLCGCQQSRNKNGFH*TKVHVMSSVWGIGY
Trigger: ATATCCTATTCCCCAGACCGAGCTCATCACATGCACCTTAGTCCAATGGAAGCCATTCTTGTTTCGCGACTGTTGACACCCACACAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS CCA 90 bp CACAGGAGACCCTGGGTAGGGAGGTTTCGTTGTCTTTGGAGACTGTaGATAAGCTTTAGTAGCTGTCTTGGATATCACAGGAGAAGATGG +
Preference number: 5 (lower is better)
Translates to: HRRPWVGRFRCLWRL*ISFSSCLGYHRRRW
Trigger: CCATCTTCTCCTGTGATATCCAAGACAGCTACTAAAGCTTATCCACAGTCTCCAAAGACAACGAAACCTCCCTACCCAGGGTCTCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp TCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAAAATCCCTCCATGCCTaGAGGCCGGTAGTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SNFGNKNGYKANCRASHSKSLHA*RPVVGL
Trigger: CAGCCCAACTACCGGCCTCAAGGCATGGAGGGATTT...TGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCCCATCGCTCCTCCATTaGCTTTTCGTACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSPSLLH*LFVLQP
Trigger: AGGCTGCAGTACGAAAAGCAAATGGAGGAGCGATGG...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCACTGGGGAATAGGATATaGCCACGGTGGATGAAGACA +
Preference number: 5 (lower is better)
Translates to: LQAASSSDLTISSFTGSPLGNRI*PRWMKT
Trigger: TGTCTTCATCCACCGTGGCAATATCCTATTCCCCAG...TGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000452324.3
CDS-3UTR CAA 90 bp ACTGCTTTCCAACAGAGAAACTCTGGAGATGGGGAACCTCCTGAATTTCTTCTCTTCTCCGCTTTCCTCTaGGGCATGTCTTGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: TAFQQRNSGDGEPPEFLLFSAFL*GMSWPE
Trigger: TTCTGGCCAAGACATGCCCAAGAGGAAAGCGGAGAA...GAGAAGAAATTCAGGAGGTTCCCCATCTCCAGAGTTTCTCTGTTGGAAAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp CTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTTCTCCGCTTTCCTCTaGGGCATGTCTTGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: LKPSKVKVSRFLPRVASVFSAFL*GMSWPE
Trigger: TTCTGGCCAAGACATGCCCAAGAGGAAAGCGGAGAA...AACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp GCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTCTCGCTGGCATGCTaGTCCACTACATGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: AKAQQGESFKVSTKSGQCFSLAC*STTCFS
Trigger: AGAGAAGCATGTAGTGGACAAGCATGCCAGCGAGAA...ACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCATCTCTCCAGCCTATCTaGTTCTTCCTTCTCCAGTCG +
Preference number: 5 (lower is better)
Translates to: LQAASSSDLTISSFTGSPSLQPI*FFLLQS
Trigger: CGACTGGAGAAGGAAGAACAAGATAGGCTGGAGAGA...TGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCGTTGAGAGGAGTTTCTaGGCCAGGACTGTTAAATCC +
Preference number: 5 (lower is better)
Translates to: AASSSDLTISSFTGSPNTVERSF*ARTVKS
Trigger: GGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAAC...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACTTTCTCCAGGATCTGTaGCTCCCGAGCAGCCAGACA +
Preference number: 5 (lower is better)
Translates to: QGESFKVSTKSGQCLTYYFLQDL*LPSSQT
Trigger: TGTCTGGCTGCTCGGGAGCAACAGATCCTGGAGAAA...GTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp ATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGTTTCTCCAGGATCTGTaGCTCCCGAGCAGCCAGACA +
Preference number: 5 (lower is better)
Translates to: IRMVIKRIAEPVTQVIQRFLQDL*LPSSQT
Trigger: TGTCTGGCTGCTCGGGAGCAACAGATCCTGGAGAAA...CCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp AAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGTCCATCGCTCCTCCATTaGCTTTTCGTACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: KNGYKANCRASHSGYSEGPSLLH*LFVLQP
Trigger: AGGCTGCAGTACGAAAAGCAAATGGAGGAGCGATGG...ACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTCTGGGGAATAGGATATaGCCACGGTGGATGAAGACA +
Preference number: 5 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFLGNRI*PRWMKT
Trigger: TGTCTTCATCCACCGTGGCAATATCCTATTCCCCAG...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000452324.3
CDS-3UTR CAA 90 bp GACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTAGAAGTTGCTGTTCGTaGCCCCCGCTTCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: DYQQLYGFSKHLLLKGCCRSCCS*PPLHLL
Trigger: GAGAAGGTGAAGCGGGGGCAACGAACAGCAACTTCT...ACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCTTCTCGCTGGCATGCTaGTCCACTACATGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSFSLAC*STTCFS
Trigger: AGAGAAGCATGTAGTGGACAAGCATGCCAGCGAGAA...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTTCTCTCCAGCCTATCTaGTTCTTCCTTCTCCAGTCG +
Preference number: 5 (lower is better)
Translates to: LLQAASSSDLTISSFTGSSLQPI*FFLLQS
Trigger: CGACTGGAGAAGGAAGAACAAGATAGGCTGGAGAGA...AGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTCTCTCCAGCCTATCTaGTTCTTCCTTCTCCAGTCG +
Preference number: 5 (lower is better)
Translates to: LKPSKVKVSRFLPRVASVSLQPI*FFLLQS
Trigger: CGACTGGAGAAGGAAGAACAAGATAGGCTGGAGAGA...AACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCATTACCAGTTCCATTTaGGTCCAGAGACACCCCAGG +
Preference number: 5 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSITSSI*VQRHPR
Trigger: CCTGGGGTGTCTCTGGACCAAAATGGAACTGGTAAT...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTATTACCAGTTCCATTTaGGTCCAGAGACACCCCAGG +
Preference number: 5 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFITSSI*VQRHPR
Trigger: CCTGGGGTGTCTCTGGACCAAAATGGAACTGGTAAT...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp GCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTCCTTCGATAAGGTTTTaGTTACAGTCGTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: AKAQQGESFKVSTKSGQCPSIRF*LQSSRL
Trigger: CAGCCTGGACGACTGTAACAAAAACCTTATCGAAGG...ACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CTATGGTTTCTGTGTGCCTGTCATAAAGGGACTTGGCCAGTATTTGCCGAGATGTGTCAACAGAAGGTGTaGAGAGGAGTTTCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: LWFLCACHKGTWPVFAEMCQQKV*RGVSWP
Trigger: TGGCCAAGAAACTCCTCTCAACACCTTCTGTTGACA...CATCTCGGCAAATACTGGCCAAGTCCCTTTATGACAGGCACACAGAAACCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp TCCAATGTGGGCCCCCTATTGTTTCAGAATGCTATGGTTTTTGTTTGCGCCTGGGCTAGTAGCTCGGATTaGACTATCAGCAGCTTTACG +
Preference number: 5 (lower is better)
Translates to: SNVGPLLFQNAMVFVCAWASSSD*TISSFT
Trigger: CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC...CCAGGCGCAAACAAAAACCATAGCATTCTGAAACAATAGGGGGCCCACATTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGACTTGGCCAGTATTaGCCGAGATGGACAGCACCG +
Preference number: 5 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKGLGQY*PRWTAP
Trigger: CGGTGCTGTCCATCTCGGCAAATACTGGCCAAGTCC...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS TCA 90 bp TGTAGACGTAGATGTAGCTTTCTTCTTCTCAATGTTTCGAGTGGGTaGAGACTTGTAAGAAGGGTTAAGAGGGCCAAGAGGAGCTCGGTC +
Preference number: 5 (lower is better)
Translates to: CRRRCSFLLLNVSSG*RLVRRVKRAKRSSV
Trigger: GACCGAGCTCCTCTTGGCCCTCTTAACCCTTCTTACAAGTCTTCACCCACTCGAAACATTGAGAAGAAGAAAGCTACATCTACGTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS-3UTR CAA 90 bp AGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGTTTCTCCAGGATCTGTaGCTCCCGAGCAGCCAGACA +
Preference number: 5 (lower is better)
Translates to: SHSGYSEGHYDNREVQEVFLQDL*LPSSQT
Trigger: TGTCTGGCTGCTCGGGAGCAACAGATCCTGGAGAAA...CACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CTTCTACACAGGTTTTTAAAAGCCTGGTTTGGTTTCAGCACATTGAGCTTACAGAGAAGTTGCTGTTCGTaGCCCCCGCTTCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: LLHRFLKAWFGFSTLSLQRSCCS*PPLHLL
Trigger: GAGAAGGTGAAGCGGGGGCAACGAACAGCAACTTCT...CTGTAAGCTCAATGTGCTGAAACCAAACCAGGCTTTTAAAAACCTGTGTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp ATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAGAAGTTGCTGTTCGTaGCCCCCGCTTCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: ILPRNTVTFRANNLGSSGRSCCS*PPLHLL
Trigger: GAGAAGGTGAAGCGGGGGCAACGAACAGCAACTTCT...ACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp TCCAATGTGGGCCCCCTATTGTTTCAGAATGCTATGGTTTTTGTTTGCGCCTGGGAGGTTTCGTTGTCTTaGGAGACTGTGGATAAGCTT +
Preference number: 5 (lower is better)
Translates to: SNVGPLLFQNAMVFVCAWEVSLS*ETVDKL
Trigger: AAGCTTATCCACAGTCTCCAAAGACAACGAAACCTC...CCAGGCGCAAACAAAAACCATAGCATTCTGAAACAATAGGGGGCCCACATTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACGAGGTTTCGTTGTCTTaGGAGACTGTGGATAAGCTT +
Preference number: 5 (lower is better)
Translates to: QAASSSDLTISSFTGSPNEVSLS*ETVDKL
Trigger: AAGCTTATCCACAGTCTCCAAAGACAACGAAACCTC...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CGAGCCAGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGGTAGGGAGGTTTCGTaGTCTTTGGAGACTGTGGAT +
Preference number: 5 (lower is better)
Translates to: RASHSGYSEGHYDNREVQGREVS*SLETVD
Trigger: ATCCACAGTCTCCAAAGACAACGAAACCTCCCTACC...CTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACTGGCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCTTCTCGCTGGCATGCTaGTCCACTACATGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVFSLAC*STTCFS
Trigger: AGAGAAGCATGTAGTGGACAAGCATGCCAGCGAGAA...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp ACTTTGCTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCCCTTCGATAAGGTTTTaGTTACAGTCGTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TLLKPSKVKVSRFLPRVAPSIRF*LQSSRL
Trigger: CAGCCTGGACGACTGTAACAAAAACCTTATCGAAGG...GGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAGCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTGTTGAGAGGAGTTTCTaGGCCAGGACTGTTAAATCC +
Preference number: 5 (lower is better)
Translates to: LKPSKVKVSRFLPRVASVVERSF*ARTVKS
Trigger: GGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAAC...AACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTGTCAACAGAAGGTGTaGAGAGGAGTTTCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFCQQKV*RGVSWP
Trigger: TGGCCAAGAAACTCCTCTCAACACCTTCTGTTGACA...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTGCTAGTAGCTCGGATTaGACTATCAGCAGCTTTACG +
Preference number: 5 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFASSSD*TISSFT
Trigger: CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTTTCCGAGCTAATAATTaGGGATCCAGCGGTAAGGGT +
Preference number: 5 (lower is better)
Translates to: LLQAASSSDLTISSFTGSFRANN*GSSGKG
Trigger: ACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAA...AGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCGACACGAAAGAGTCCTaGCTAGATTCAGTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSDTKES*LDSVAH
Trigger: ATGGGCAACTGAATCTAGCAAGGACTCTTTCGTGTC...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp GCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCCCCACACAGGATTTTTaGGTTTTCTTCTACACAGGT +
Preference number: 5 (lower is better)
Translates to: AASSSDLTISSFTGSPNTPTQDF*VFFYTG
Trigger: ACCTGTGTAGAAGAAAACCAAAAAATCCTGTGTGGG...GGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS TCA 90 bp GTTGAATCATCCAGGCTATTTGATTTCCCATCAAGGGCATCCAGATaGATGAGTCCCCCAGCTGGCTTAAGCCCATTAGAGAAAATGTCT +
Preference number: 5 (lower is better)
Translates to: VESSRLFDFPSRASR*MSPPAGLSPLEKMS
Trigger: AGACATTTTCTCTAATGGGCTTAAGCCAGCTGGGGGACTCATTCATCTGGATGCCCTTGATGGGAAATCAAATAGCCTGGATGATTCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp TTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCCCATCGCTCCTCCATTaGCTTTTCGTACTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: FDYQQLYGFSKHLLLKGCPSLLH*LFVLQP
Trigger: AGGCTGCAGTACGAAAAGCAAATGGAGGAGCGATGG...GCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CTATGGTTTCTGTGTGCCTGTCATAAAGGGACTTGGCCAGTATTTGCCGAGATGGCTTTAGTAGCTGTCTaGGATATCACAGGAGAAGAT +
Preference number: 5 (lower is better)
Translates to: LWFLCACHKGTWPVFAEMALVAV*DITGED
Trigger: ATCTTCTCCTGTGATATCCAAGACAGCTACTAAAGC...CATCTCGGCAAATACTGGCCAAGTCCCTTTATGACAGGCACACAGAAACCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp CAGAAGCTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGAGGTTTCGTTGTCTTaGGAGACTGTGGATAAGCTT +
Preference number: 5 (lower is better)
Translates to: QKLLQAASSSDLTISSFTEVSLS*ETVDKL
Trigger: AAGCTTATCCACAGTCTCCAAAGACAACGAAACCTC...CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAGCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp GAATGCTATGGTTTTTGTTTGCGCCTGGTTTTATTAAAGCTGGGCAAACACAGGGGTAGGGAGGTTTCGTaGTCTTTGGAGACTGTGGAT +
Preference number: 5 (lower is better)
Translates to: ECYGFCLRLVLLKLGKHRGREVS*SLETVD
Trigger: ATCCACAGTCTCCAAAGACAACGAAACCTCCCTACC...CCTGTGTTTGCCCAGCTTTAATAAAACCAGGCGCAAACAAAAACCATAGCATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp ATGAAGATTTTAAGGTGTGACACGAAAGAGTCCTTGCTAGATTCAGTTGCCCATTTCTCCGCTTTCCTCTaGGGCATGTCTTGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: MKILRCDTKESLLDSVAHFSAFL*GMSWPE
Trigger: TTCTGGCCAAGACATGCCCAAGAGGAAAGCGGAGAA...ATGGGCAACTGAATCTAGCAAGGACTCTTTCGTGTCACACCTTAAAATCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp TTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTTCTCCGCTTTCCTCTaGGGCATGTCTTGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: FDYQQLYGFSKHLLLKGCFSAFL*GMSWPE
Trigger: TTCTGGCCAAGACATGCCCAAGAGGAAAGCGGAGAA...GCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp GACATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCCTTCTCCAGTCGTTCTaGCTCCTCCTGTTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: DILPRNTVTFRANNLGSSLLQSF*LLLFLL
Trigger: CAGAAGGAACAGGAGGAGCAAGAACGACTGGAGAAG...GCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp TCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCATCTCTCCAGCCTATCTaGTTCTTCCTTCTCCAGTCG +
Preference number: 5 (lower is better)
Translates to: SNFGNKNGYKANCRASHSSLQPI*FFLLQS
Trigger: CGACTGGAGAAGGAAGAACAAGATAGGCTGGAGAGA...TGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTTGGGGACAACCAGTTTaGTCTTCTTTTCCACACACA +
Preference number: 5 (lower is better)
Translates to: LLQAASSSDLTISSFTGSWGQPV*SSFPHT
Trigger: TGTGTGTGGAAAAGAAGACAAAACTGGTTGTCCCCA...AGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp ATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGATTACCAGTTCCATTTaGGTCCAGAGACACCCCAGG +
Preference number: 5 (lower is better)
Translates to: IRMVIKRIAEPVTQVIQRITSSI*VQRHPR
Trigger: CCTGGGGTGTCTCTGGACCAAAATGGAACTGGTAAT...CCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp TGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCTGTCAACAGAAGGTGTaGAGAGGAGTTTCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: CAPTLGIRMVIKRIAEPVCQQKV*RGVSWP
Trigger: TGGCCAAGAAACTCCTCTCAACACCTTCTGTTGACA...GACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACAAAGGGATGCTGTATTaGTCAACAGAAGGTGTTGAG +
Preference number: 5 (lower is better)
Translates to: QAASSSDLTISSFTGSPNKGMLY*STEGVE
Trigger: CTCAACACCTTCTGTTGACAAATACAGCATCCCTTT...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp TCCAATGTGGGCCCCCTATTGTTTCAGAATGCTATGGTTTTTGTTTGCGCCTGGACTACTGAGACTTCTTaGTATCTCCTGGTTGCAAAC +
Preference number: 5 (lower is better)
Translates to: SNVGPLLFQNAMVFVCAWTTETS*YLLVAN
Trigger: GTTTGCAACCAGGAGATACAAAGAAGTCTCAGTAGT...CCAGGCGCAAACAAAAACCATAGCATTCTGAAACAATAGGGGGCCCACATTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS TCA 90 bp TGTAGACGTAGATGTAGCTTTCTTCTTCTCAATGTTTCGAGTGGGTaGAGACTTGTAAGAAGGGTTAAGAGGGCCAAGAGGAGCATCATG +
Preference number: 5 (lower is better)
Translates to: CRRRCSFLLLNVSSG*RLVRRVKRAKRSIM
Trigger: CATGATGCTCCTCTTGGCCCTCTTAACCCTTCTTACAAGTCTTCACCCACTCGAAACATTGAGAAGAAGAAAGCTACATCTACGTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443379.7
CDS GCA 90 bp ATTTCATCTATTCTCTTCTTTCTCTCCAGTCTCTCCTGCTCAATCTaGAGCATAATCTGTTCTCTCTCGAGACGCATCTGTTCAGCTACC +
Preference number: 5 (lower is better)
Translates to: ISSILFFLSSLSCSI*SIICSLSRRICSAT
Trigger: GGTAGCTGAACAGATGCGTCTCGAGAGAGAACAGATTATGCTGCAGATTGAGCAGGAGAGACTGGAGAGAAAGAAGAGAATAGATGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp ATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGTCTTCTCGTCTTTCTTaGGCCAATCTCTGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: IRMVIKRIAEPVTQVIQRSSRLS*ANLCLS
Trigger: TGAGAGGCAGAGATTGGCCAAAGAAAGACGAGAAGA...CCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp ATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTTGGAATACTGAATCATaGGCCTGCCCAGAGAGCATG +
Preference number: 5 (lower is better)
Translates to: ILPRNTVTFRANNLGSSGWNTES*ACPESM
Trigger: CATGCTCTCTGGGCAGGCCAATGATTCAGTATTCCA...ACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS-3UTR CAA 90 bp ATACTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTGGTAGGGAGGTTTCGTaGTCTTTGGAGACTGTGGAT +
Preference number: 5 (lower is better)
Translates to: ILPRNTVTFRANNLGSSGGREVS*SLETVD
Trigger: ATCCACAGTCTCCAAAGACAACGAAACCTCCCTACC...ACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp TTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCGGTAGGGAGGTTTCGTaGTCTTTGGAGACTGTGGAT +
Preference number: 5 (lower is better)
Translates to: FDYQQLYGFSKHLLLKGCGREVS*SLETVD
Trigger: ATCCACAGTCTCCAAAGACAACGAAACCTCCCTACC...GCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp TACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGGCATGGGGACAACCAGTTTaGTCTTCTTTTCCACACACA +
Preference number: 5 (lower is better)
Translates to: YYFNPRRIMWGNAFLQVAWGQPV*SSFPHT
Trigger: TGTGTGTGGAAAAGAAGACAAAACTGGTTGTCCCCA...TGCCACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACCCATTGATTTCCATTTaGTTGGGGACAACCAGTTTT +
Preference number: 5 (lower is better)
Translates to: QAASSSDLTISSFTGSPNPLISI*LGTTSF
Trigger: AAAACTGGTTGTCCCCAACAAAATGGAAATCAATGG...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp ACTGCTTTCCAACAGAGAAACTCTGGAGATGGGGAACCTCCTGAATTTCTTCTCCAGGTGTTCAATCCATaGATTTCCATTTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: TAFQQRNSGDGEPPEFLLQVFNP*ISILLG
Trigger: CCCCAACAAAATGGAAATCAATGGATTGAACACCTG...GAGAAGAAATTCAGGAGGTTCCCCATCTCCAGAGTTTCTCTGTTGGAAAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTAATCATCCAGGCTATTaGATTTCCCATCAAGGGCAT +
Preference number: 5 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFNHPGY*ISHQGH
Trigger: ATGCCCTTGATGGGAAATCAAATAGCCTGGATGATT...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACTGAACTTCTTCAGTaGAATCATCCAGGCTATTTG +
Preference number: 5 (lower is better)
Translates to: QAASSSDLTISSFTGSPNTELLQ*NHPGYL
Trigger: CAAATAGCCTGGATGATTCAACTGAAGAAGTTCAGT...GTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGAATTACCAGTTCCATTTaGGTCCAGAGACACCCCAGG +
Preference number: 5 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGITSSI*VQRHPR
Trigger: CCTGGGGTGTCTCTGGACCAAAATGGAACTGGTAAT...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp ATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGCCTTCGATAAGGTTTTaGTTACAGTCGTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: IRMVIKRIAEPVTQVIQRPSIRF*LQSSRL
Trigger: CAGCCTGGACGACTGTAACAAAAACCTTATCGAAGG...CCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATCCTTCGATAAGGTTTTaGTTACAGTCGTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYPSIRF*LQSSRL
Trigger: CAGCCTGGACGACTGTAACAAAAACCTTATCGAAGG...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGCTAGTAGCTCGGATTaGACTATCAGCAGCTTTACG +
Preference number: 5 (lower is better)
Translates to: LPRNTVTFRANNLGSSGKASSSD*TISSFT
Trigger: CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC...CTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATGCTAGTAGCTCGGATTaGACTATCAGCAGCTTTACG +
Preference number: 5 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYASSSD*TISSFT
Trigger: CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CTACCTAGGAATACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGTTCCGAGCTAATAATTaGGGATCCAGCGGTAAGGGT +
Preference number: 5 (lower is better)
Translates to: LPRNTVTFRANNLGSSGKFRANN*GSSGKG
Trigger: ACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAA...CTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGTATTCCTAGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp ATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGTTCCGAGCTAATAATTaGGGATCCAGCGGTAAGGGT +
Preference number: 5 (lower is better)
Translates to: IRMVIKRIAEPVTQVIQRFRANN*GSSGKG
Trigger: ACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAA...CCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTATCTTCTCGTCTTTCTTaGGCCAATCTCTGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLSSRLS*ANLCLS
Trigger: TGAGAGGCAGAGATTGGCCAAAGAAAGACGAGAAGA...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp TCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCATGGGGACAACCAGTTTaGTCTTCTTTTCCACACACA +
Preference number: 5 (lower is better)
Translates to: SNFGNKNGYKANCRASHSWGQPV*SSFPHT
Trigger: TGTGTGTGGAAAAGAAGACAAAACTGGTTGTCCCCA...TGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp ACAGTTACATTCCGAGCTAATAATTTGGGATCCAGCGGTAAGGGTGACAGAAGCCCATTGATTTCCATTTaGTTGGGGACAACCAGTTTT +
Preference number: 5 (lower is better)
Translates to: TVTFRANNLGSSGKGDRSPLISI*LGTTSF
Trigger: AAAACTGGTTGTCCCCAACAAAATGGAAATCAATGG...GCTTCTGTCACCCTTACCGCTGGATCCCAAATTATTAGCTCGGAATGTAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CAGAAGCTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGCCATTGATTTCCATTTaGTTGGGGACAACCAGTTTT +
Preference number: 5 (lower is better)
Translates to: QKLLQAASSSDLTISSFTPLISI*LGTTSF
Trigger: AAAACTGGTTGTCCCCAACAAAATGGAAATCAATGG...CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAGCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp AAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGTAATCATCCAGGCTATTaGATTTCCCATCAAGGGCAT +
Preference number: 5 (lower is better)
Translates to: KNGYKANCRASHSGYSEGNHPGY*ISHQGH
Trigger: ATGCCCTTGATGGGAAATCAAATAGCCTGGATGATT...ACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp GCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTACTGAACTTCTTCAGTaGAATCATCCAGGCTATTTG +
Preference number: 5 (lower is better)
Translates to: ASSSDLTISSFTGSPNTFTELLQ*NHPGYL
Trigger: CAAATAGCCTGGATGATTCAACTGAAGAAGTTCAGT...AAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTACTGAACTTCTTCAGTaGAATCATCCAGGCTATTTG +
Preference number: 5 (lower is better)
Translates to: LKPSKVKVSRFLPRVASVTELLQ*NHPGYL
Trigger: CAAATAGCCTGGATGATTCAACTGAAGAAGTTCAGT...AACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp AGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGGTTGAGAGGAGTTTCTaGGCCAGGACTGTTAAATCC +
Preference number: 5 (lower is better)
Translates to: SHSGYSEGHYDNREVQEVVERSF*ARTVKS
Trigger: GGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAAC...CACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGTCAACAGAAGGTGTaGAGAGGAGTTTCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGCQQKV*RGVSWP
Trigger: TGGCCAAGAAACTCCTCTCAACACCTTCTGTTGACA...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGAGACACGAAAGAGTCCTaGCTAGATTCAGTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGDTKES*LDSVAH
Trigger: ATGGGCAACTGAATCTAGCAAGGACTCTTTCGTGTC...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp TCCAATGTGGGCCCCCTATTGTTTCAGAATGCTATGGTTTTTGTTTGCGCCTGGAGAATGCTATGGTTTTaGTTTGCGCCTGGTTTTATT +
Preference number: 5 (lower is better)
Translates to: SNVGPLLFQNAMVFVCAWRMLWF*FAPGFI
Trigger: AATAAAACCAGGCGCAAACAAAAACCATAGCATTCT...CCAGGCGCAAACAAAAACCATAGCATTCTGAAACAATAGGGGGCCCACATTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp ATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGAATGTGGGCCCCCTATaGTTTCAGAATGCTATGGTT +
Preference number: 5 (lower is better)
Translates to: IRMVIKRIAEPVTQVIQRNVGPL*FQNAMV
Trigger: AACCATAGCATTCTGAAACAATAGGGGGCCCACATT...CCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp GACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTAATGTGGGCCCCCTATaGTTTCAGAATGCTATGGTT +
Preference number: 5 (lower is better)
Translates to: DYQQLYGFSKHLLLKGCCNVGPL*FQNAMV
Trigger: AACCATAGCATTCTGAAACAATAGGGGGCCCACATT...ACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp CTAAAGCCCAGCAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTGAGGCATGTACTTTATaGAGTAGAGACACATACACA +
Preference number: 5 (lower is better)
Translates to: LKPSKVKVSRFLPRVASVEACTL*SRDTYT
Trigger: TGTGTATGTGTCTCTACTCAATAAAGTACATGCCTC...AACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTGCTGGGCTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS CCA 90 bp AAGGGATGCTGTATTTGTCAACAGAAGGTGTTGAGAGGAGTTTCTTaGCCAGGACTGTTAAATCCTTCGATAAGGTTTTTGTTACAGTCG +
Preference number: 5 (lower is better)
Translates to: KGCCICQQKVLRGVS*PGLLNPSIRFLLQS
Trigger: CGACTGTAACAAAAACCTTATCGAAGGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAACACCTTCTGTTGACAAATACAGCATCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CAAGGTGAAAGTTTCAAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACGCTTTAGTAGCTGTCTaGGATATCACAGGAGAAGAT +
Preference number: 5 (lower is better)
Translates to: QGESFKVSTKSGQCLTYYALVAV*DITGED
Trigger: ATCTTCTCCTGTGATATCCAAGACAGCTACTAAAGC...GTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTTGAAACTTTCACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp GGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGGGGACAACCAGTTTaGTCTTCTTTTCCACACACA +
Preference number: 5 (lower is better)
Translates to: GFDYQQLYGFSKHLLLKGWGQPV*SSFPHT
Trigger: TGTGTGTGGAAAAGAAGACAAAACTGGTTGTCCCCA...TCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp GACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTCAGGTGTTCAATCCATaGATTTCCATTTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: DYQQLYGFSKHLLLKGCCQVFNP*ISILLG
Trigger: CCCCAACAAAATGGAAATCAATGGATTGAACACCTG...ACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATAATCATCCAGGCTATTaGATTTCCCATCAAGGGCAT +
Preference number: 5 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYNHPGY*ISHQGH
Trigger: ATGCCCTTGATGGGAAATCAAATAGCCTGGATGATT...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp TGTTTATGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGGTTGAGAGGAGTTTCTaGGCCAGGACTGTTAAATCC +
Preference number: 5 (lower is better)
Translates to: CLCAPTLGIRMVIKRIAEVERSF*ARTVKS
Trigger: GGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAAC...CTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACATAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp ACTTACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGAAAGGGATGCTGTATTaGTCAACAGAAGGTGTTGAG +
Preference number: 5 (lower is better)
Translates to: TYYFNPRRIMWGNAFLQVKGMLY*STEGVE
Trigger: CTCAACACCTTCTGTTGACAAATACAGCATCCCTTT...CACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp AAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCAGGTTATTCAGAGGGTTCATTACTGACTGTTTaGACTTCCTTCCTCAACCAA +
Preference number: 5 (lower is better)
Translates to: KNGYKANCRASHSGYSEGSLLTV*TSFLNQ
Trigger: TTGGTTGAGGAAGGAAGTCAAAACAGTCAGTAATGA...ACCCTCTGAATAACCTGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp CAGAAGCTTCTTCAAGCAGCTAGTAGCTCGGATTTGACTATCAGCAGCTTTACGTGCTATGGTTTTTGTTaGCGCCTGGTTTTATTAAAG +
Preference number: 5 (lower is better)
Translates to: QKLLQAASSSDLTISSFTCYGFC*RLVLLK
Trigger: CTTTAATAAAACCAGGCGCAAACAAAAACCATAGCA...CGTAAAGCTGCTGATAGTCAAATCCGAGCTACTAGCTGCTTGAAGAAGCTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp TCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCAGTCACTCACTTTGTATCTCCTGGTaGCAAACCTCTCTCAGAATT +
Preference number: 5 (lower is better)
Translates to: SNFGNKNGYKANCRASHSLCISW*QTSLRI
Trigger: AATTCTGAGAGAGGTTTGCAACCAGGAGATACAAAG...TGAGTGACTGGCTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATACTACTGAGACTTCTTaGTATCTCCTGGTTGCAAAC +
Preference number: 5 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYTTETS*YLLVAN
Trigger: GTTTGCAACCAGGAGATACAAAGAAGTCTCAGTAGT...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTAGCTTTAGTAGCTGTCTaGGATATCACAGGAGAAGAT +
Preference number: 5 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLALVAV*DITGED
Trigger: ATCTTCTCCTGTGATATCCAAGACAGCTACTAAAGC...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGCTTTAGTAGCTGTCTaGGATATCACAGGAGAAGAT +
Preference number: 5 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKALVAV*DITGED
Trigger: ATCTTCTCCTGTGATATCCAAGACAGCTACTAAAGC...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp TGGTCACAATGGTGCTGTGAGGTACAACAAATCACAAGAAAACAGACATTTAGCCAGGTGTTCAATCCATaGATTTCCATTTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: WSQWCCEVQQITRKQTFSQVFNP*ISILLG
Trigger: CCCCAACAAAATGGAAATCAATGGATTGAACACCTG...GCTAAATGTCTGTTTTCTTGTGATTTGTTGTACCTCACAGCACCATTGTGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGCAGGTGTTCAATCCATaGATTTCCATTTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKQVFNP*ISILLG
Trigger: CCCCAACAAAATGGAAATCAATGGATTGAACACCTG...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGAATCATCCAGGCTATTaGATTTCCCATCAAGGGCAT +
Preference number: 5 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKNHPGY*ISHQGH
Trigger: ATGCCCTTGATGGGAAATCAAATAGCCTGGATGATT...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGAAAGGGATGCTGTATTaGTCAACAGAAGGTGTTGAG +
Preference number: 5 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKKGMLY*STEGVE
Trigger: CTCAACACCTTCTGTTGACAAATACAGCATCCCTTT...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS-3UTR CAA 90 bp ACTTACTACTTTAACCCCAGAAGAATAATGTGGGGCAATGCATTTCTGCAGGTGGAATTTTTAATGAGTTaGACAGGGAAAGGACACCCA +
Preference number: 5 (lower is better)
Translates to: TYYFNPRRIMWGNAFLQVEFLMS*TGKGHP
Trigger: TGGGTGTCCTTTCCCTGTCAAACTCATTAAAAATTC...CACCTGCAGAAATGCATTGCCCCACATTATTCTTCTGGGGTTAAAGTAGTAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp AAGGTTTCTACCAAGAGTGGCCAGTGTTTGACATACTACCTAGGAATACAGTTAACTGAACTTCTTCAGTaGAATCATCCAGGCTATTTG +
Preference number: 5 (lower is better)
Translates to: KVSTKSGQCLTYYLGIQLTELLQ*NHPGYL
Trigger: CAAATAGCCTGGATGATTCAACTGAAGAAGTTCAGT...TAACTGTATTCCTAGGTAGTATGTCAAACACTGGCCACTCTTGGTAGAAACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp ACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTAAAGGGATGCTGTATTaGTCAACAGAAGGTGTTGAG +
Preference number: 5 (lower is better)
Translates to: TQVIQRVTMIIEKFRKCFKGMLY*STEGVE
Trigger: CTCAACACCTTCTGTTGACAAATACAGCATCCCTTT...AAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS-3UTR CAA 90 bp AGTAGCTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATAAAGGTCATTTTAATTaGAAAGCCACATTTCGCCAC +
Preference number: 5 (lower is better)
Translates to: SSSDLTISSFTGSPNTFYKGHFN*KATFRH
Trigger: GTGGCGAAATGTGGCTTTCAAATTAAAATGACCTTT...ATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAGCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp CTTCTACACAGGTTTTTAAAAGCCTGGTTTGGTTTCAGCACATTGAGCTTACAGGAGGCATGTACTTTATaGAGTAGAGACACATACACA +
Preference number: 5 (lower is better)
Translates to: LLHRFLKAWFGFSTLSLQEACTL*SRDTYT
Trigger: TGTGTATGTGTCTCTACTCAATAAAGTACATGCCTC...CTGTAAGCTCAATGTGCTGAAACCAAACCAGGCTTTTAAAAACCTGTGTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp TGTTTATGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGCCCACACAGGATTTTTaGGTTTTCTTCTACACAGGT +
Preference number: 5 (lower is better)
Translates to: CLCAPTLGIRMVIKRIAEPTQDF*VFFYTG
Trigger: ACCTGTGTAGAAGAAAACCAAAAAATCCTGTGTGGG...CTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACATAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp AGTCACTCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGGAATTTTTAATGAGTTaGACAGGGAAAGGACACCCA +
Preference number: 5 (lower is better)
Translates to: SHSGYSEGHYDNREVQEVEFLMS*TGKGHP
Trigger: TGGGTGTCCTTTCCCTGTCAAACTCATTAAAAATTC...CACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGAGTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp TGTTTATGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGTCATTACTGACTGTTTaGACTTCCTTCCTCAACCAA +
Preference number: 5 (lower is better)
Translates to: CLCAPTLGIRMVIKRIAESLLTV*TSFLNQ
Trigger: TTGGTTGAGGAAGGAAGTCAAAACAGTCAGTAATGA...CTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACATAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp CTCGGATTTGACTATCAGCAGCTTTACGGGTTCTCCAAACACCTTTTATTAAAGTGCTATGGTTTTTGTTaGCGCCTGGTTTTATTAAAG +
Preference number: 5 (lower is better)
Translates to: LGFDYQQLYGFSKHLLLKCYGFC*RLVLLK
Trigger: CTTTAATAAAACCAGGCGCAAACAAAAACCATAGCA...CTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGCTGCTGATAGTCAAATCCGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp TGTTTATGTGCTCCAACTTTGGGAATAAGAATGGTTATAAAGCGAATTGCCGAGAAAGGTCATTTTAATTaGAAAGCCACATTTCGCCAC +
Preference number: 5 (lower is better)
Translates to: CLCAPTLGIRMVIKRIAEKGHFN*KATFRH
Trigger: GTGGCGAAATGTGGCTTTCAAATTAAAATGACCTTT...CTCGGCAATTCGCTTTATAACCATTCTTATTCCCAAAGTTGGAGCACATAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS-3UTR CAA 90 bp TCAGGTTATTCAGAGGGTCACTATGATAATAGAGAAGTTCAGGAAGTGCTTTATAGAATGCTATGGTTTTaGTTTGCGCCTGGTTTTATT +
Preference number: 5 (lower is better)
Translates to: SGYSEGHYDNREVQEVLYRMLWF*FAPGFI
Trigger: AATAAAACCAGGCGCAAACAAAAACCATAGCATTCT...ATAAAGCACTTCCTGAACTTCTCTATTATCATAGTGACCCTCTGAATAACCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000379651.7
CDS GCA 72 bp CCCGCCACTCGCACAGAGAGGGGTGCGGCCCTTGGATaGACGTCCGGACGATCCTGGGCCAGGGAAAGGGCG +
Preference number: 6 (lower is better)
Translates to: PATRTERGAALG*TSGRSWARERA
Trigger: CGCCCTTTCCCTGGCCCAGGATCGTCCGGACGTGCATCCAAGGGCCGCACCCCTCTCTGTGCGAGTGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS CCA 72 bp GAACCCCGCCACTCGCACAGAGAGGGGTGCGGCCCTTaGATGCACGTCCGGACGATCCTGGGCCAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: EPRHSHREGCGP*MHVRTILGQGK
Trigger: CTTTCCCTGGCCCAGGATCGTCCGGACGTGCATCCAAGGGCCGCACCCCTCTCTGTGCGAGTGGCGGGGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS GCA 72 bp GTAGTTGGGCTGAGAGGTCCGCACCGCGCCCGGTTCTaGGATCTTCCCTGGGAGAGAGGTTCCCCGCGCAGT +
Preference number: 6 (lower is better)
Translates to: VVGLRGPHRARF*DLPWERGSPRS
Trigger: ACTGCGCGGGGAACCTCTCTCCCAGGGAAGATCGCAGAACCGGGCGCGGTGCGGACCTCTCAGCCCAACTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS GCA 72 bp CCCAAGAAAGAACCCCGCCACTCGCACAGAGAGGGGTaGGGCCCTTGGATGCACGTCCGGACGATCCTGGGC +
Preference number: 6 (lower is better)
Translates to: PKKEPRHSHREG*GPWMHVRTILG
Trigger: GCCCAGGATCGTCCGGACGTGCATCCAAGGGCCGCACCCCTCTCTGTGCGAGTGGCGGGGTTCTTTCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS CAA 72 bp AGAACCCCGCCACTCGCACAGAGAGGGGTGCGGCCCTaGGATGCACGTCCGGACGATCCTGGGCCAGGGAAA +
Preference number: 6 (lower is better)
Translates to: RTPPLAQRGVRP*DARPDDPGPGK
Trigger: TTTCCCTGGCCCAGGATCGTCCGGACGTGCATCCAAGGGCCGCACCCCTCTCTGTGCGAGTGGCGGGGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS GCA 72 bp GGTGCTCCCCACGAATACTTCTTTTTCAGCTCCAGCTaGTGTGTGCGCTCCAGGGACCGGCGCATCATCGCC +
Preference number: 6 (lower is better)
Translates to: GAPHEYFFFSSS*CVRSRDRRIIA
Trigger: GGCGATGATGCGCCGGTCCCTGGAGCGCACACAGCAGCTGGAGCTGAAAAAGAAGTATTCGTGGGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS GCA 72 bp CTTCCCCAAGGCTGCGCTGTTTTCGGCTTTCCCTCCTaGGGCAGCAGCATGCTTCTCGCTGGCATGCTTGTC +
Preference number: 6 (lower is better)
Translates to: LPQGCAVFGFPS*GSSMLLAGMLV
Trigger: GACAAGCATGCCAGCGAGAAGCATGCTGCTGCCGCAGGAGGGAAAGCCGAAAACAGCGCAGCCTTGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
ENST00000466145.1
CDS CCA 72 bp ATTTCAAAAATCCCTCCATGCCTTGAGGCCGGTAGTTaGGCTGAGAGGTCCGCACCGCGCCCGGTTCTGCGA +
Preference number: 6 (lower is better)
Translates to: ISKIPPCLEAGS*AERSAPRPVLR
Trigger: TCGCAGAACCGGGCGCGGTGCGGACCTCTCAGCCCAACTACCGGCCTCAAGGCATGGAGGGATTTTTGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
CDS GCA 72 bp GCGCTGTTTTCGGCTTTCCCTCCTGCGGCAGCAGCATaGTTCTCGCTGGCATGCTTGTCCACTACATGCTTC +
Preference number: 6 (lower is better)
Translates to: ALFSAFPPAAAA*FSLACLSTTCF
Trigger: GAAGCATGTAGTGGACAAGCATGCCAGCGAGAAGCATGCTGCTGCCGCAGGAGGGAAAGCCGAAAACAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
ENST00000466145.1
CDS GCA 72 bp CAGAGGGGACCCGAAGTTCACAACAGGAAGAGAAGTTaGTGTTCGTTGCCCCCGCTTCACCTTCTCCACCAG +
Preference number: 6 (lower is better)
Translates to: QRGPEVHNRKRS*CSLPPLHLLHQ
Trigger: CTGGTGGAGAAGGTGAAGCGGGGGCAACGAACAGCAACTTCTCTTCCTGTTGTGAACTTCGGGTCCCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS GCA 72 bp CCGAAGTTCACAACAGGAAGAGAAGTTGCTGTTCGTTaGCCCCGCTTCACCTTCTCCACCAGAGAGGCCTCT +
Preference number: 6 (lower is better)
Translates to: PKFTTGREVAVR*PRFTFSTREAS
Trigger: AGAGGCCTCTCTGGTGGAGAAGGTGAAGCGGGGGCAACGAACAGCAACTTCTCTTCCTGTTGTGAACTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CCA 72 bp GAGGGCCAAGAGGAGCATCATGTCCTCCGGGTCCAATaGCCAGTGGTGCTCCCCACGAATACTTCTTTTTCA +
Preference number: 6 (lower is better)
Translates to: EGQEEHHVLRVQ*PVVLPTNTSFS
Trigger: TGAAAAAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGACCCGGAGGACATGATGCTCCTCTTGGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443379.7
CDS CCA 72 bp GAGGAGCTCGGTCTGGGGAATAGGATATTGCCACGGTaGATGAAGACAGGCGTTTATTCATGGGAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: EELGLGNRILPR*MKTGVYSWEAP
Trigger: CGGAGCCTCCCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS TCA 72 bp AGCTCGGTCTGGGGAATAGGATATTGCCACGGTGGATaGAGACAGGCGTTTATTCATGGGAGGCTCCGTTGG +
Preference number: 6 (lower is better)
Translates to: SSVWGIGYCHGG*RQAFIHGRLRW
Trigger: CCAACGGAGCCTCCCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379643.10
ENST00000452324.3
CDS CCA 72 bp GTCACATGCATCATGTCCTCCGGGTCCAATGGCCAGTaGTGCTCCCCACGAATACTTCTTTTTCAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: VTCIMSSGSNGQ*CSPRILLFQLQ
Trigger: CTGGAGCTGAAAAAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGACCCGGAGGACATGATGCATGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000452324.3
CDS CCA 72 bp GATGAGCTCGGTCTGGGGAATAGGATATTGCCACGGTaGATGAAGACAGGCGTTTATTCATGGGAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: DELGLGNRILPR*MKTGVYSWEAP
Trigger: CGGAGCCTCCCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS CCA 72 bp AAGAGGAGCATCATGTCCTCCGGGTCCAATGGCCAGTaGTGCTCCCCACGAATACTTCTTTTTCAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: KRSIMSSGSNGQ*CSPRILLFQLQ
Trigger: CTGGAGCTGAAAAAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGACCCGGAGGACATGATGCTCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443379.7
CDS CAA 72 bp GAGGGCCAAGAGGAGCTCGGTCTGGGGAATAGGATATaGCCACGGTGGATGAAGACAGGCGTTTATTCATGG +
Preference number: 6 (lower is better)
Translates to: EGQEELGLGNRI*PRWMKTGVYSW
Trigger: CCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGCTCCTCTTGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452324.3
CDS TCA 72 bp TACTCGGTCTGGGGAATAGGATATTGCCACGGTGGATaGAGACAGGCGTTTATTCATGGGAGGCTCCGTTGG +
Preference number: 6 (lower is better)
Translates to: YSVWGIGYCHGG*RQAFIHGRLRW
Trigger: CCAACGGAGCCTCCCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379651.7
CDS CCA 72 bp GCCATCGCTCCTCCATTTGCTTTTCGTACTGCAGCCTaGCTCTTTTCTGTTTCTCCAGGATCTGTTGCTCCC +
Preference number: 6 (lower is better)
Translates to: AIAPPFAFRTAA*LFSVSPGSVAP
Trigger: GGGAGCAACAGATCCTGGAGAAACAGAAAAGAGCCAGGCTGCAGTACGAAAAGCAAATGGAGGAGCGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CCA 72 bp CTCTTCTCTTTCTCCGCTTTCCTCTTGGGCATGTCTTaGCCAGAAAGGGCAGGTAAGCGGTACTTCACAGGA +
Preference number: 6 (lower is better)
Translates to: LFSFSAFLLGMS*PERAGKRYFTG
Trigger: TCCTGTGAAGTACCGCTTACCTGCCCTTTCTGGCCAAGACATGCCCAAGAGGAAAGCGGAGAAAGAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
ENST00000466145.1
CDS CCA 72 bp GGAATACTCGGTCTGGGGAATAGGATATTGCCACGGTaGATGAAGACAGGCGTTTATTCATGGGAGGCTCCG +
Preference number: 6 (lower is better)
Translates to: GILGLGNRILPR*MKTGVYSWEAP
Trigger: CGGAGCCTCCCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379651.7
CDS GCA 72 bp TTCTTTTCCTCTTCCTGCCGCTTCCTTTCTTCTTCCTaGTTTCGGGCTTCCTCTTCTAGGCGAAGCCTTTCC +
Preference number: 6 (lower is better)
Translates to: FFSSSCRFLSSS*FRASSSRRSLS
Trigger: GGAAAGGCTTCGCCTAGAAGAGGAAGCCCGAAAGCAGGAAGAAGAAAGGAAGCGGCAGGAAGAGGAAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CCA 72 bp TCTTTTCCACACACACAGCAGGCTGGACCCCCACTTTaGGGTCTTCTTTCTTCACTTGTGGAGACACATCAC +
Preference number: 6 (lower is better)
Translates to: SFPHTQQAGPPL*GLLSSLVETHH
Trigger: GTGATGTGTCTCCACAAGTGAAGAAAGAAGACCCCAAAGTGGGGGTCCAGCCTGCTGTGTGTGTGGAAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CAA 72 bp GGTGCATGTGATGAGCTCGGTCTGGGGAATAGGATATaGCCACGGTGGATGAAGACAGGCGTTTATTCATGG +
Preference number: 6 (lower is better)
Translates to: GACDELGLGNRI*PRWMKTGVYSW
Trigger: CCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGCTCATCACATGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS TCA 72 bp TCCAGGCTATTTGATTTCCCATCAAGGGCATCCAGATaGATGAGTCCCCCAGCTGGCTTAAGCCCATTAGAG +
Preference number: 6 (lower is better)
Translates to: SRLFDFPSRASR*MSPPAGLSPLE
Trigger: CTCTAATGGGCTTAAGCCAGCTGGGGGACTCATTCATCTGGATGCCCTTGATGGGAAATCAAATAGCCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS TCA 72 bp GGGAATGTCGGGGGACCAGTGAAATCTAAGAGATCTTaGAGTGCTCGGGCATTACCAGTTCCATTTTGGTCC +
Preference number: 6 (lower is better)
Translates to: GNVGGPVKSKRS*SARALPVPFWS
Trigger: GGACCAAAATGGAACTGGTAATGCCCGAGCACTTCAAGATCTCTTAGATTTCACTGGTCCCCCGACATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS GCA 72 bp AAACGAGGACAGACATGGAATACTGAATCATTGGCCTaGCCAGAGAGCATGACTGAAGCTCTGCTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: KRGQTWNTESLA*PESMTEALLLA
Trigger: AGCCAGAAGCAGAGCTTCAGTCATGCTCTCTGGGCAGGCCAATGATTCAGTATTCCATGTCTGTCCTCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS CCA 72 bp CACAGGAGACCCTGGGTAGGGAGGTTTCGTTGTCTTTaGAGACTGTGGATAAGCTTTAGTAGCTGTCTTGGA +
Preference number: 6 (lower is better)
Translates to: HRRPWVGRFRCL*RLWISFSSCLG
Trigger: TCCAAGACAGCTACTAAAGCTTATCCACAGTCTCCAAAGACAACGAAACCTCCCTACCCAGGGTCTCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS TCA 72 bp CATGGAATACTGAATCATTGGCCTGCCCAGAGAGCATaGCTGAAGCTCTGCTTCTGGCTAAAGAAGACTGTG +
Preference number: 6 (lower is better)
Translates to: HGILNHWPAQRA*LKLCFWLKKTV
Trigger: CACAGTCTTCTTTAGCCAGAAGCAGAGCTTCAGTCATGCTCTCTGGGCAGGCCAATGATTCAGTATTCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379643.10
CDS TCA 72 bp TTTCACTGGATCTCTTGGGGAATGTCGGGGGACCAGTaGAATCTAAGAGATCTTGAAGTGCTCGGGCATTAC +
Preference number: 6 (lower is better)
Translates to: FHWISWGMSGDQ*NLRDLEVLGHY
Trigger: GTAATGCCCGAGCACTTCAAGATCTCTTAGATTTCACTGGTCCCCCGACATTCCCCAAGAGATCCAGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CCA 72 bp AAAGTTTGTCACATGCATCATGTCCTCCGGGTCCAATaGCCAGTGGTGCTCCCCACGAATACTTCTTTTTCA +
Preference number: 6 (lower is better)
Translates to: KVCHMHHVLRVQ*PVVLPTNTSFS
Trigger: TGAAAAAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGACCCGGAGGACATGATGCATGTGACAAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000452324.3
CDS CAA 72 bp GACAGACATGGAATACTCGGTCTGGGGAATAGGATATaGCCACGGTGGATGAAGACAGGCGTTTATTCATGG +
Preference number: 6 (lower is better)
Translates to: DRHGILGLGNRI*PRWMKTGVYSW
Trigger: CCATGAATAAACGCCTGTCTTCATCCACCGTGGCAATATCCTATTCCCCAGACCGAGTATTCCATGTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379651.7
CDS CAA 90 bp AGAGGAGTTTCTTGGCCAGGACTGTTAAATCCTTCGATAAGGTTTTaGTTACAGTCGTCCAGGCTGAGATTTTCACTGGATCTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: RGVSWPGLLNPSIRF*LQSSRLRFSLDLLG
Trigger: CCCCAAGAGATCCAGTGAAAATCTCAGCCTGGACGACTGTAACAAAAACCTTATCGAAGGATTTAACAGTCCTGGCCAAGAAACTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS GCA 72 bp ATTCTCTTCTTTCTCTCCAGTCTCTCCTGCTCAATCTaGAGCATAATCTGTTCTCTCTCGAGACGCATCTGT +
Preference number: 6 (lower is better)
Translates to: ILFFLSSLSCSI*SIICSLSRRIC
Trigger: ACAGATGCGTCTCGAGAGAGAACAGATTATGCTGCAGATTGAGCAGGAGAGACTGGAGAGAAAGAAGAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS TCA 72 bp AGATGTAGCTTTCTTCTTCTCAATGTTTCGAGTGGGTaGAGACTTGTAAGAAGGGTTAAGAGGGCCAAGAGG +
Preference number: 6 (lower is better)
Translates to: RCSFLLLNVSSG*RLVRRVKRAKR
Trigger: CCTCTTGGCCCTCTTAACCCTTCTTACAAGTCTTCACCCACTCGAAACATTGAGAAGAAGAAAGCTACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CAA 90 bp GCTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATGCTGTATTaGTCAACAGAAGGTGTTGAGAGGAGTTTCTTGGCCAGGACTGTT +
Preference number: 6 (lower is better)
Translates to: ALRVLQTPFIKGMLY*STEGVERSFLARTV
Trigger: AACAGTCCTGGCCAAGAAACTCCTCTCAACACCTTCTGTTGACAAATACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CCA 72 bp AGCTTTAGTAGCTGTCTTGGATATCACAGGAGAAGATaGTCTCTTAGGAATGCCTCCAGAAAACTCACATCT +
Preference number: 6 (lower is better)
Translates to: SFSSCLGYHRRR*SLRNASRKLTS
Trigger: AGATGTGAGTTTTCTGGAGGCATTCCTAAGAGACCATCTTCTCCTGTGATATCCAAGACAGCTACTAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CAA 72 bp TCTTGGCCAGGACTGTTAAATCCTTCGATAAGGTTTTaGTTACAGTCGTCCAGGCTGAGATTTTCACTGGAT +
Preference number: 6 (lower is better)
Translates to: SWPGLLNPSIRF*LQSSRLRFSLD
Trigger: ATCCAGTGAAAATCTCAGCCTGGACGACTGTAACAAAAACCTTATCGAAGGATTTAACAGTCCTGGCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CAA 72 bp GTTCTCCAAACACCTTTTATTAAAGGGATGCTGTATTaGTCAACAGAAGGTGTTGAGAGGAGTTTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: VLQTPFIKGMLY*STEGVERSFLA
Trigger: GGCCAAGAAACTCCTCTCAACACCTTCTGTTGACAAATACAGCATCCCTTTAATAAAAGGTGTTTGGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CAA 90 bp AAAGGGATGCTGTATTTGTCAACAGAAGGTGTTGAGAGGAGTTTCTaGGCCAGGACTGTTAAATCCTTCGATAAGGTTTTTGTTACAGTC +
Preference number: 6 (lower is better)
Translates to: KGMLYLSTEGVERSF*ARTVKSFDKVFVTV
Trigger: GACTGTAACAAAAACCTTATCGAAGGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAACACCTTCTGTTGACAAATACAGCATCCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CAA 90 bp AAACACCTTTTATTAAAGGGATGCTGTATTTGTCAACAGAAGGTGTaGAGAGGAGTTTCTTGGCCAGGACTGTTAAATCCTTCGATAAGG +
Preference number: 6 (lower is better)
Translates to: KHLLLKGCCICQQKV*RGVSWPGLLNPSIR
Trigger: CCTTATCGAAGGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAACACCTTCTGTTGACAAATACAGCATCCCTTTAATAAAAGGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS GCA 72 bp CTTTACGGGTTCTCCAAACACCTTTTATTAAAGGGATaGTGTATTTGTCAACAGAAGGTGTTGAGAGGAGTT +
Preference number: 6 (lower is better)
Translates to: LYGFSKHLLLKG*CICQQKVLRGV
Trigger: AACTCCTCTCAACACCTTCTGTTGACAAATACAGCATCCCTTTAATAAAAGGTGTTTGGAGAACCCGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CAA 72 bp CTGTATTTGTCAACAGAAGGTGTTGAGAGGAGTTTCTaGGCCAGGACTGTTAAATCCTTCGATAAGGTTTTT +
Preference number: 6 (lower is better)
Translates to: LYLSTEGVERSF*ARTVKSFDKVF
Trigger: AAAAACCTTATCGAAGGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAACACCTTCTGTTGACAAATACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3
CDS CAA 72 bp TTATTAAAGGGATGCTGTATTTGTCAACAGAAGGTGTaGAGAGGAGTTTCTTGGCCAGGACTGTTAAATCCT +
Preference number: 6 (lower is better)
Translates to: LLKGCCICQQKV*RGVSWPGLLNP
Trigger: AGGATTTAACAGTCCTGGCCAAGAAACTCCTCTCAACACCTTCTGTTGACAAATACAGCATCCCTTTAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379643.10
ENST00000379651.7
ENST00000443379.7
ENST00000452324.3