Pregenerated sensors for MAP4K5 (Homo sapiens)
Ensembl gene IDs: ENSG00000012983Ensembl transcript IDs: ENST00000013125.8, ENST00000013125.9, ENST00000554066.1, ENST00000554091.5, ENST00000554990.6, ENST00000555216.5, ENST00000557124.1, ENST00000557390.6, ENST00000682126.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGAGTACTGCTGCAACTTCTaGGGCCATCCAGTAAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LKFSKFNCCYSYCPDITEYCCNF*GHPVRG Trigger: ACCCCTTACTGGATGGCCCCAGAAGTTGCAGCAGTA...CTCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGAATTCTTCTCTACTGCTaGAACTTCTGGGGCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: AEVLQVQLLLFLLPRYHRILLYC*NFWGHP Trigger: TGGATGGCCCCAGAAGTTGCAGCAGTAGAGAAGAAT...TCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGAACCATTCTTCTCTACTaGTGCAACTTCTGGGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: AEVLQVQLLLFLLPRYHRTILLY*CNFWGH Trigger: ATGGCCCCAGAAGTTGCAGCAGTAGAGAAGAATGGT...TCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGAGGGTAGCTGTTATTTTTaGAGCCACACCAAAGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LKFSKFNCCYSYCPDITEGSCYF*SHTKVS Trigger: GCTGACTTTGGTGTGGCTGCAAAAATAACAGCTACC...CTCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| 3UTR-3UTR GCA 90 bp | TCAACTACTAACTTGCTGTGTAAATTGGATAGATCTCTTAACCTTGCTAAACCCAAATTTAAGCTGCTCTaGAACCCTCCTTTGCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: STTNLLCKLDRSLNLAKPKFKLL*NPPLLK Trigger: TTTTAGCAAAGGAGGGTTGCAGAGCAGCTTAAATTT...GGGTTTAGCAAGGTTAAGAGATCTATCCAATTTACACAGCAAGTTAGTAGTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000013125.8 |
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| 3UTR-3UTR GCA 90 bp | TCAACTACTAACTTGCTGTGTAAATTGGATAGATCTCTTAACCTTGCTAAACCCTTTGTTAAGCAAAATTaGATGTGTGTGTTGAACCCC | + |
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Preference number: 2 (lower is better) Translates to: STTNLLCKLDRSLNLAKPFVKQN*MCVLNP Trigger: GGGGTTCAACACACACATGCAATTTTGCTTAACAAA...GGGTTTAGCAAGGTTAAGAGATCTATCCAATTTACACAGCAAGTTAGTAGTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000013125.8 |
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| 3UTR-3UTR GCA 90 bp | TCAACTACTAACTTGCTGTGTAAATTGGATAGATCTCTTAACCTTGCTAAACCCTTAAATACTTCCCCCTaGTACATTAGGGATGATAAT | + |
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Preference number: 2 (lower is better) Translates to: STTNLLCKLDRSLNLAKPLNTSP*YIRDDN Trigger: ATTATCATCCCTAATGTAGCAGGGGGAAGTATTTAA...GGGTTTAGCAAGGTTAAGAGATCTATCCAATTTACACAGCAAGTTAGTAGTTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000013125.8 |
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| 3UTR-3UTR CAA 90 bp | TCAACTACTAACTTGCTGTGTAAATTGGATAGATCTCTTAACCTTGCTAAACCCGCTATTGCTAACCCCTaGTTCATCATCTCAATGCTG | + |
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Preference number: 3 (lower is better) Translates to: STTNLLCKLDRSLNLAKPAIANP*FIISML Trigger: CAGCATTGAGATGATGAACAAGGGGTTAGCAATAGC...GGGTTTAGCAAGGTTAAGAGATCTATCCAATTTACACAGCAAGTTAGTAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000013125.8 |
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| 3UTR-3UTR CAA 90 bp | ACTAACTTGCTGTGTAAATTGGATAGATCTCTTAACCTTGCTAAACCCTTACTTCTCTGCAACCCTCCTTaGCTAAAAGTTAGATACATT | + |
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Preference number: 3 (lower is better) Translates to: TNLLCKLDRSLNLAKPLLLCNPP*LKVRYI Trigger: AATGTATCTAACTTTTAGCAAAGGAGGGTTGCAGAG...AAGTAAGGGTTTAGCAAGGTTAAGAGATCTATCCAATTTACACAGCAAGTTAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000013125.8 |
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| 3UTR TCA 72 bp | AGGACTATTTGTCTCATAGCTTTTATTAAGCAAACTTaGTATAACCACCACACAGTGGCAAGAGATAGACTA | + |
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Preference number: 3 (lower is better) Translates to: RTICLIAFIKQT*YNHHTVARDRL Trigger: TAGTCTATCTCTTGCCACTGTGTGGTGGTTATATCAAGTTTGCTTAATAAAAGCTATGAGACAAATAGTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000013125.8 |
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| CDS-3UTR GCA 90 bp | GCTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGACCCCGTAGGTGCCGCTaGCGACCCTCTGGACGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AEVLQVQLLLFLLPRYHRPRRCR*RPSGRV Trigger: AACTCGTCCAGAGGGTCGGCAGCGGCACCTACGGGG...TCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| CDS-3UTR GCA 90 bp | GCTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGAAGACGTCCCCGTAGGTaGCGCTGCCGACCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AEVLQVQLLLFLLPRYHRRRPRR*RCRPSG Trigger: TCCAGAGGGTCGGCAGCGGCACCTACGGGGACGTCT...TCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| CDS-3UTR CCA 90 bp | CTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGAGAGAGCCCTCATTGGGTaGAGATCAAACATAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LKFSKFNCCYSYCPDITERALIG*RSNIGG Trigger: GCCACCTATGTTTGATCTCCACCCAATGAGGGCTCT...CTCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| CDS-3UTR GCA 90 bp | CTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGAGATTCTTCTCTACTGCTaGAACTTCTGGGGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKFSKFNCCYSYCPDITEILLYC*NFWGHP Trigger: TGGATGGCCCCAGAAGTTGCAGCAGTAGAGAAGAAT...CTCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| CDS-3UTR GCA 90 bp | CTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGAGACCATTCTTCTCTACTaGTGCAACTTCTGGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKFSKFNCCYSYCPDITETILLY*CNFWGH Trigger: ATGGCCCCAGAAGTTGCAGCAGTAGAGAAGAATGGT...CTCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| 3UTR CAA 72 bp | AATTGCTGTTATTCCTACTGCCCAGATATCACAGAGTaGGTTGTAGCCACCATTCTTCTCTACTGCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NCCYSYCPDITE*VVATILLYCCN Trigger: GTTGCAGCAGTAGAGAAGAATGGTGGCTACAACCAACTCTGTGATATCTGGGCAGTAGGAATAACAGCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| 3UTR CAA 72 bp | GAGTCAGAAGACTCATGGTCAGGCTCAACTACTAACTaGCTGTGTAAATTGGATAGATCTCTTAACCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ESEDSWSGSTTN*LCKLDRSLNLA Trigger: AGCAAGGTTAAGAGATCTATCCAATTTACACAGCAAGTTAGTAGTTGAGCCTGACCATGAGTCTTCTGACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000013125.8 |
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| CDS-3UTR GCA 90 bp | GCTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGATTTAATGATTTTTACTaGAGCCAGCTCTCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AEVLQVQLLLFLLPRYHRFNDFY*SQLSCV Trigger: CACACAGGAGAGCTGGCTGCAGTAAAAATCATTAAA...TCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| CDS-3UTR GCA 90 bp | CTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGAGTTCTCCAAGTTCAATTaGTGTTATTCCTACTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKFSKFNCCYSYCPDITEFSKFN*CYSYCP Trigger: TGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAA...CTCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| CDS CCA 90 bp | TCCCGGATTCCCGCTAACAAGCACGAACGGCGCCGCTTCCCAACATaGAGCCTCCGCCCGCAGCTCCGTTTCCTAGACCGCACCCGCGTC | + |
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Preference number: 5 (lower is better) Translates to: SRIPANKHERRRFPT*SLRPQLRFLDRTRV Trigger: GACGCGGGTGCGGTCTAGGAAACGGAGCTGCGGGCGGAGGCTCCATGTTGGGAAGCGGCGCCGTTCGTGCTTGTTAGCGGGAATCCGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557390.6 ENST00000682126.1 |
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| CDS CCA 90 bp | TCTGCCACAGGCCCACAACTTGGGCTACTCTGTCTTCTGAGAATTTaGGGAGCTCTGCTTTCTGAATCAGGACAATGTTTTATGGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SATGPQLGLLCLLRI*GALLSESGQCFMVD Trigger: ATCAACCATAAAACATTGTCCTGATTCAGAAAGCAGAGCTCCCCAAATTCTCAGAAGACAGAGTAGCCCAAGTTGTGGGCCTGTGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000013125.9 ENST00000554990.6 ENST00000557390.6 ENST00000682126.1 |
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| CDS-3UTR CAA 90 bp | CTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGAGCCAGATATCACAGAGTaGGTTGTAGCCACCATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LKFSKFNCCYSYCPDITEPDITE*VVATIL Trigger: AAGAATGGTGGCTACAACCAACTCTGTGATATCTGG...CTCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| CDS-3UTR CAA 90 bp | CTGAAGTTCTCCAAGTTCAATTGCTGTTATTCCTACTGCCCAGATATCACAGAGGTTCTCCAAGTTCAATaGCTGTTATTCCTACTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LKFSKFNCCYSYCPDITEVLQVQ*LLFLLP Trigger: GGGCAGTAGGAATAACAGCAATTGAACTTGGAGAAC...CTCTGTGATATCTGGGCAGTAGGAATAACAGCAATTGAACTTGGAGAACTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554091.5 |
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| CDS TCA 90 bp | CTCTCCTGTGTGTACATTTCTGGCCTAATTTACTGGATCGTAAGTTaGACATGGGCAGCAGAATTCCGTTGTCAAATGGAAGAGTATACA | + |
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Preference number: 5 (lower is better) Translates to: LSCVYISGLIYWIVS*TWAAEFRCQMEEYT Trigger: TGTATACTCTTCCATTTGACAACGGAATTCTGCTGCCCATGTTCAACTTACGATCCAGTAAATTAGGCCAGAAATGTACACACAGGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555216.5 |
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| CDS TCA 90 bp | TTGTCTAAACACACTAAAACGGTATCTCTCTCCAACTGTGTTACATaGATGGAATCTAACTGCTGGCTGCCTGCACCAATTTCTGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: LSKHTKTVSLSNCVT*MESNCWLPAPISVN Trigger: GTTTACAGAAATTGGTGCAGGCAGCCAGCAGTTAGATTCCATTCATGTAACACAGTTGGAGAGAGATACCGTTTTAGTGTGTTTAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000013125.9 ENST00000554990.6 ENST00000682126.1 |
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| CDS TCA 90 bp | ATTTGCCAGTATTTGCACCATCAACAAAAGGATTCCACTGTAACATaGAATTTGGGTCTGATGACAATCCCATTTCATCTCGTGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: ICQYLHHQQKDSTVT*NLGLMTIPFHLVLL Trigger: CAGAAGCACGAGATGAAATGGGATTGTCATCAGACCCAAATTTCATGTTACAGTGGAATCCTTTTGTTGATGGTGCAAATACTGGCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000013125.9 ENST00000554990.6 ENST00000557390.6 ENST00000682126.1 |
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| CDS TCA 90 bp | AAAGCAACTGTTTGGAGGCAATGCACCACAGACACCGTAAGTCTGTaGTTCTTAAAAGAAGGAAAATACATGGTGGTAAGAGCCATATTT | + |
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Preference number: 5 (lower is better) Translates to: KATVWRQCTTDTVSL*FLKEGKYMVVRAIF Trigger: AAATATGGCTCTTACCACCATGTATTTTCCTTCTTTTAAGAATCACAGACTTACGGTGTCTGTGGTGCATTGCCTCCAAACAGTTGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554990.6 |
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| CDS GCA 90 bp | AATCAAAGAAAAATCATCTCCAGGCTCCAATTTAATGATTTTTACTaGAGCCAGCTCTCCTGTGTGTACATTTCTGGCCTTATAGACGTC | + |
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Preference number: 5 (lower is better) Translates to: NQRKIISRLQFNDFY*SQLSCVYISGLIDV Trigger: GACGTCTATAAGGCCAGAAATGTACACACAGGAGAGCTGGCTGCAGTAAAAATCATTAAATTGGAGCCTGGAGATGATTTTTCTTTGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000013125.9 ENST00000557390.6 ENST00000682126.1 |
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| CDS GCA 90 bp | AATCAAAGAAAAATCATCTCCAGGCTCCAATTTAATGATTTTTACTaGAGCCAGCTCTCCTGTGTGTACATTTCTGGCCTAATTTACTGG | + |
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Preference number: 5 (lower is better) Translates to: NQRKIISRLQFNDFY*SQLSCVYISGLIYW Trigger: CCAGTAAATTAGGCCAGAAATGTACACACAGGAGAGCTGGCTGCAGTAAAAATCATTAAATTGGAGCCTGGAGATGATTTTTCTTTGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000555216.5 |
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| CDS CCA 72 bp | CCCGCTAACAAGCACGAACGGCGCCGCTTCCCAACATaGAGCCTCCGCCCGCAGCTCCGTCTAATGGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PANKHERRRFPT*SLRPQLRLMGA Trigger: CGCCCCCATTAGACGGAGCTGCGGGCGGAGGCTCCATGTTGGGAAGCGGCGCCGTTCGTGCTTGTTAGCGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000013125.9 |
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| CDS CAA 72 bp | CGCCCGCAGCTCCGTCTAATGGGGGCGGCCCCGTCTTaGTTGAGCGCGGAGCCCGGGACCTACTTCCTAGAC | + |
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Preference number: 6 (lower is better) Translates to: RPQLRLMGAAPS*LSAEPGTYFLD Trigger: GTCTAGGAAGTAGGTCCCGGGCTCCGCGCTCAACAAAGACGGGGCCGCCCCCATTAGACGGAGCTGCGGGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000013125.9 |
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| CDS CCA 72 bp | CCCGCTAACAAGCACGAACGGCGCCGCTTCCCAACATaGAGCCTCCGCCCGCAGCTCCGTTTCCTAGACCGC | + |
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Preference number: 6 (lower is better) Translates to: PANKHERRRFPT*SLRPQLRFLDR Trigger: GCGGTCTAGGAAACGGAGCTGCGGGCGGAGGCTCCATGTTGGGAAGCGGCGCCGTTCGTGCTTGTTAGCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557390.6 ENST00000682126.1 |
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| CDS GCA 72 bp | TGTGTACATTTCTGGCCTTATAGACGTCCCCGTAGGTaGCGCTGCCGACCCTCTGGACGAGTTCGTAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CVHFWPYRRPRR*RCRPSGRVRSP Trigger: AGGACTACGAACTCGTCCAGAGGGTCGGCAGCGGCACCTACGGGGACGTCTATAAGGCCAGAAATGTACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000013125.9 ENST00000554091.5 ENST00000557390.6 ENST00000682126.1 |
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| CDS TCA 72 bp | AGTAGAGATGGGGTTTCACCATCTCATGAGGTTTCCTaGCATCAGGAGTTCCTGACCCCAGGTGATCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SRDGVSPSHEVS*HQEFLTPGDLP Trigger: GGGCAGATCACCTGGGGTCAGGAACTCCTGATGTCAGGAAACCTCATGAGATGGTGAAACCCCATCTCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554990.6 |
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| CDS CAA 72 bp | GCTCCCATCAGAACTTTTGGGGTGGGTGGAAGGCCATaGATGGCTGGTTTAGGGAAGTCTCGTTTGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: APIRTFGVGGRP*MAGLGKSRLSF Trigger: AAAGGACAAACGAGACTTCCCTAAACCAGCCATCAATGGCCTTCCACCCACCCCAAAAGTTCTGATGGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000013125.9 ENST00000554990.6 ENST00000557390.6 ENST00000682126.1 |
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| CDS CCA 72 bp | GAAGAGTATACACTGAGGTGGCCTGAGATGATCTTTTaGAGACATTGGGCTCATGATTCAGCACCAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: EEYTLRWPEMIF*RHWAHDSAPGR Trigger: TCGGCCTGGTGCTGAATCATGAGCCCAATGTCTCCAAAAGATCATCTCAGGCCACCTCAGTGTATACTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555216.5 |
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| CDS TCA 72 bp | TCAGCTCTGGCATTCCTGTTTGTAGATCTAATGGTATaGCGAATGATTGCATGGGGCTCAAAGTCATCGTCA | + |
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Preference number: 6 (lower is better) Translates to: SALAFLFVDLMV*RMIAWGSKSSS Trigger: TGACGATGACTTTGAGCCCCATGCAATCATTCGTCATACCATTAGATCTACAAACAGGAATGCCAGAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000013125.9 ENST00000557390.6 ENST00000682126.1 |
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| CDS TCA 72 bp | CACACTAAAACGGTATCTCTCTCCAACTGTGTTACATaGATGGAATCTAACTGCTGGCTGCCTGCACCAATT | + |
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Preference number: 6 (lower is better) Translates to: HTKTVSLSNCVT*MESNCWLPAPI Trigger: AATTGGTGCAGGCAGCCAGCAGTTAGATTCCATTCATGTAACACAGTTGGAGAGAGATACCGTTTTAGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000013125.9 ENST00000554990.6 ENST00000682126.1 |
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| CDS CCA 72 bp | TTTTTACTGCAGCCAGCTCTCCTGTGTGTACATTTCTaGCCTAATTTACTGGATCGTAAGTTGAACATGGGC | + |
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Preference number: 6 (lower is better) Translates to: FLLQPALLCVHF*PNLLDRKLNMG Trigger: GCCCATGTTCAACTTACGATCCAGTAAATTAGGCCAGAAATGTACACACAGGAGAGCTGGCTGCAGTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555216.5 |
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| CDS CAA 90 bp | GCTCTCCTGTGTGTACATTTCTGGCCTAATTTACTGGATCGTAAGTaGAACATGGGCAGCAGAATTCCGTTGTCAAATGGAAGAGTATAC | + |
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Preference number: 6 (lower is better) Translates to: ALLCVHFWPNLLDRK*NMGSRIPLSNGRVY Trigger: GTATACTCTTCCATTTGACAACGGAATTCTGCTGCCCATGTTCAACTTACGATCCAGTAAATTAGGCCAGAAATGTACACACAGGAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555216.5 |
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| CDS TCA 72 bp | CACACTAAAACGGTATCTCTCTCCAACTGTGTTACATaGATGGAATCTAACTGCTGGCTGCACCAATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: HTKTVSLSNCVT*MESNCWLHQFL Trigger: CAGAAATTGGTGCAGCCAGCAGTTAGATTCCATTCATGTAACACAGTTGGAGAGAGATACCGTTTTAGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557390.6 |
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| CDS TCA 72 bp | GTGTACATTTCTGGCCTAATTTACTGGATCGTAAGTTaGACATGGGCAGCAGAATTCCGTTGTCAAATGGAA | + |
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Preference number: 6 (lower is better) Translates to: VYISGLIYWIVS*TWAAEFRCQME Trigger: TTCCATTTGACAACGGAATTCTGCTGCCCATGTTCAACTTACGATCCAGTAAATTAGGCCAGAAATGTACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555216.5 |
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| CDS GCA 72 bp | AAAATCATCTCCAGGCTCCAATTTAATGATTTTTACTaGAGCCAGCTCTCCTGTGTGTACATTTCTGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: KIISRLQFNDFY*SQLSCVYISGL Trigger: AAGGCCAGAAATGTACACACAGGAGAGCTGGCTGCAGTAAAAATCATTAAATTGGAGCCTGGAGATGATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000013125.9 ENST00000557390.6 ENST00000682126.1 |
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| CDS GCA 72 bp | AAAATCATCTCCAGGCTCCAATTTAATGATTTTTACTaGAGCCAGCTCTCCTGTGTGTACATTTCTGGCCTA | + |
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Preference number: 6 (lower is better) Translates to: KIISRLQFNDFY*SQLSCVYISGL Trigger: TAGGCCAGAAATGTACACACAGGAGAGCTGGCTGCAGTAAAAATCATTAAATTGGAGCCTGGAGATGATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000554066.1 ENST00000555216.5 |
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| CDS CAA 72 bp | TGTGTACATTTCTGGCCTAATTTACTGGATCGTAAGTaGAACATGGGCAGCAGAATTCCGTTGTCAAATGGA | + |
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Preference number: 6 (lower is better) Translates to: CVHFWPNLLDRK*NMGSRIPLSNG Trigger: TCCATTTGACAACGGAATTCTGCTGCCCATGTTCAACTTACGATCCAGTAAATTAGGCCAGAAATGTACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555216.5 |
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| CDS TCA 72 bp | GAAATAACTGTTCCATCGTTGCCTCATGTAGCTCATTaGGATTCAGTGTGTAAATACCATCTTCAGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: EITVPSLPHVAH*DSVCKYHLQFQ Trigger: TTGGAACTGAAGATGGTATTTACACACTGAATCTCAATGAGCTACATGAGGCAACGATGGAACAGTTATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000013125.9 ENST00000554990.6 ENST00000557390.6 ENST00000682126.1 |
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| CDS TCA 72 bp | TATTTGCACCATCAACAAAAGGATTCCACTGTAACATaGAATTTGGGTCTGATGACAATCCCATTTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: YLHHQQKDSTVT*NLGLMTIPFHL Trigger: GAGATGAAATGGGATTGTCATCAGACCCAAATTTCATGTTACAGTGGAATCCTTTTGTTGATGGTGCAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000013125.9 ENST00000554990.6 ENST00000557390.6 ENST00000682126.1 |
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| CDS CAA 72 bp | AACATTTGTGGCAGCCTTTTGTATCAGGAATCTTTGTaGTTAAAGCGAATTTTCTTGGTAGTATTCGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: NICGSLLYQESL*LKRIFLVVFGL Trigger: CAGACCGAATACTACCAAGAAAATTCGCTTTAACAACAAAGATTCCTGATACAAAAGGCTGCCACAAATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000013125.9 ENST00000554990.6 ENST00000557124.1 ENST00000557390.6 ENST00000682126.1 |
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