RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP4K2 (Homo sapiens)

Ensembl gene IDs: ENSG00000168067

Ensembl transcript IDs: ENST00000294066.7, ENST00000377350.7, ENST00000424945.5, ENST00000433890.5, ENST00000435926.5, ENST00000439069.5, ENST00000444560.1, ENST00000467689.1, ENST00000468062.5, ENST00000470088.5, ENST00000482314.5

Found 819 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAACTTCTGCAGCGGCTCATACCACTGCAGCAGGAGCAGGCTGGTaGGCAGGGCGGCCAGCAGGAAGGTGGCACCCGTGTAGGGGTTCC +
Preference number: 1 (lower is better)
Translates to: ETSAAAHTTAAGAGW*AGRPAGRWHPCRGS
Trigger: GGAACCCCTACACGGGTGCCACCTTCCTGCTGGCCGCCCTGCCCACCAGCCTGCTCCTGCTGCAGTGGTATGAGCCGCTGCAGAAGTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR TCA 90 bp GGAAGATCCGCCACAAGGAGGCACTGTCTGCTGCTGGCCGGTTGGTaGACGGAAAGCCAGTCCTCCCCAGGGCGCCTTTGGTCAGGGCCT +
Preference number: 1 (lower is better)
Translates to: GRSATRRHCLLLAGW*TESQSSPGRLWSGP
Trigger: AGGCCCTGACCAAAGGCGCCCTGGGGAGGACTGGCTTTCCGTTCACCAACCGGCCAGCAGCAGACAGTGCCTCCTTGTGGCGGATCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR GCA 90 bp GAATCTGAGGTCCGGGAAGATCCGCCACAAGGAGGCACTGTCTGCTaGTGGCCGGTTGGTGAACGGAAAGCCAGTCCTCCCCAGGGCGCC +
Preference number: 1 (lower is better)
Translates to: ESEVREDPPQGGTVC*WPVGERKASPPQGA
Trigger: GGCGCCCTGGGGAGGACTGGCTTTCCGTTCACCAACCGGCCAGCAGCAGACAGTGCCTCCTTGTGGCGGATCTTCCCGGACCTCAGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 90 bp TCTGAGGTCCGGGAAGATCCGCCACAAGGAGGCACTGTCTGCTGCTaGCCGGTTGGTGAACGGAAAGCCAGTCCTCCCCAGGGCGCCTTT +
Preference number: 1 (lower is better)
Translates to: SEVREDPPQGGTVCC*PVGERKASPPQGAF
Trigger: AAAGGCGCCCTGGGGAGGACTGGCTTTCCGTTCACCAACCGGCCAGCAGCAGACAGTGCCTCCTTGTGGCGGATCTTCCCGGACCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 90 bp CCGAGGGGGTCCTCTCGGCTGGGCCGTGCTGCCCCCGGGAGTGAATaGTGTCTGGAAACATGTCATAGGTCTCCAGCTCACAGTCCTCAG +
Preference number: 1 (lower is better)
Translates to: PRGSSRLGRAAPGSE*CLETCHRSPAHSPQ
Trigger: CTGAGGACTGTGAGCTGGAGACCTATGACATGTTTCCAGACACCATTCACTCCCGGGGGCAGCACGGCCCAGCCGAGAGGACCCCCTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR TCA 90 bp CCCCTGGACAGGCCCGCTGCTCTTAGTAGGTGCTCTGGTGGCCCGTaGGGATGTAGAGGTTGCTGTGCGCCTCTGGGTTGTCAGTGGGAA +
Preference number: 1 (lower is better)
Translates to: PLDRPAALSRCSGGP*GCRGCCAPLGCQWE
Trigger: TTCCCACTGACAACCCAGAGGCGCACAGCAACCTCTACATCCTCACGGGCCACCAGAGCACCTACTAAGAGCAGCGGGCCTGTCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
3UTR GCA 90 bp ACTGAATCTGAGGTCCGGGAAGATCCGCCACAAGGAGGCACTGTCTaGTGCTGGCCGGTTGGTGAACGGAAAGCCAGTCCTCCCCAGGGC +
Preference number: 1 (lower is better)
Translates to: TESEVREDPPQGGTV*CWPVGERKASPPQG
Trigger: GCCCTGGGGAGGACTGGCTTTCCGTTCACCAACCGGCCAGCAGCAGACAGTGCCTCCTTGTGGCGGATCTTCCCGGACCTCAGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR GCA 90 bp CGGTTGGTGGGGATGGAGAGGGGAACCTGTTGCTGTAGCCTCCGCTaGTCAAACAGGCCTGGGAGGTCATGGGCCCAGATGTGCGTGGAT +
Preference number: 1 (lower is better)
Translates to: RLVGMERGTCCCSLR*SNRPGRSWAQMCVD
Trigger: ATCCACGCACATCTGGGCCCATGACCTCCCAGGCCTGTTTGAGCAGCGGAGGCTACAGCAACAGGTTCCCCTCTCCATCCCCACCAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR CCA 90 bp ACCTGTTGCTGTAGCCTCCGCTGCTCAAACAGGCCTGGGAGGTCATaGGCCCAGATGTGCGTGGATTTCCCTGAGAGTGACAGCAGCACG +
Preference number: 1 (lower is better)
Translates to: TCCCSLRCSNRPGRS*AQMCVDFPESDSST
Trigger: CGTGCTGCTGTCACTCTCAGGGAAATCCACGCACATCTGGGCCCATGACCTCCCAGGCCTGTTTGAGCAGCGGAGGCTACAGCAACAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR CCA 90 bp CTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCTaGATCACCTGCTGGGCCGAGCCTGGGATCCCCTCAGGTGGGATG +
Preference number: 1 (lower is better)
Translates to: LTQRSKLTRIVSLST*ITCWAEPGIPSGGM
Trigger: CATCCCACCTGAGGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR GCA 90 bp CAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTaGCAGTGTGGCCGTGGGCTCGCCCTGCATGTTGACAATCCTCAC +
Preference number: 1 (lower is better)
Translates to: QAHHSLDGEIKGQLR*QCGRGLALHVDNPH
Trigger: GTGAGGATTGTCAACATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
3UTR CCA 90 bp CCCTGGGCTGGCTCCCCATTCCAGCCAAGAAACCCTCCCAGTCACTaGACAGAGTCAGAACAGTTGAAACTCTGCTGGAGGGTGGCTGAG +
Preference number: 1 (lower is better)
Translates to: PWAGSPFQPRNPPSH*TESEQLKLCWRVAE
Trigger: CTCAGCCACCCTCCAGCAGAGTTTCAACTGTTCTGACTCTGTCCAGTGACTGGGAGGGTTTCTTGGCTGGAATGGGGAGCCAGCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 90 bp AAATTTCACCTGGTGAAACTGGATCTCCGAGGGGGTCCTCTCGGCTaGGCCGTGCTGCCCCCGGGAGTGAATGGTGTCTGGAAACATGTC +
Preference number: 1 (lower is better)
Translates to: KFHLVKLDLRGGPLG*AVLPPGVNGVWKHV
Trigger: GACATGTTTCCAGACACCATTCACTCCCGGGGGCAGCACGGCCCAGCCGAGAGGACCCCCTCGGAGATCCAGTTTCACCAGGTGAAATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR CCA 90 bp AACATGGGTGTGAATGCCTGGTGTGAAGAGATGTGTTCCCTCCCCTaGGCTGGCTCCCCATTCCAGCCAAGAAACCCTCCCAGTCACTGG +
Preference number: 1 (lower is better)
Translates to: NMGVNAWCEEMCSLP*AGSPFQPRNPPSHW
Trigger: CCAGTGACTGGGAGGGTTTCTTGGCTGGAATGGGGAGCCAGCCCAGGGGAGGGAACACATCTCTTCACACCAGGCATTCACACCCATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 90 bp GTCTGGTCTGACCCTCCCACAGGTTTCTGCCCATGGAGGGGCAACTaGACAGCAGCTATCACCACGGCATATGTAGCCACCGCTAACTCA +
Preference number: 1 (lower is better)
Translates to: VWSDPPTGFCPWRGN*TAAITTAYVATANS
Trigger: TGAGTTAGCGGTGGCTACATATGCCGTGGTGATAGCTGCTGTCCAGTTGCCCCTCCATGGGCAGAAACCTGTGGGAGGGTCAGACCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 90 bp CTCTTCCTCCCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTaGGGCGCCAAATTTCACCTGGTGAAACTGGATCTCCGAGGGGGT +
Preference number: 1 (lower is better)
Translates to: LFLPRLIQWVSFLPA*GAKFHLVKLDLRGG
Trigger: ACCCCCTCGGAGATCCAGTTTCACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGGGAGGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR TCA 90 bp TCACTGGACAGAGTCAGAACAGTTGAAACTCTGCTGGAGGGTGGCTaGGGGGACAGTGTGACACCCTGGGAACCACTGAGCCTACTCGCA +
Preference number: 1 (lower is better)
Translates to: SLDRVRTVETLLEGG*GDSVTPWEPLSLLA
Trigger: TGCGAGTAGGCTCAGTGGTTCCCAGGGTGTCACACTGTCCCCTCAGCCACCCTCCAGCAGAGTTTCAACTGTTCTGACTCTGTCCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR GCA 90 bp TCCACTCTTCCTCCCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTaGGTGGGGCGCCAAATTTCACCTGGTGAAACTGGATCTCCGAGG +
Preference number: 1 (lower is better)
Translates to: STLPPTAHSVGQFPS*VGRQISPGETGSPR
Trigger: CCTCGGAGATCCAGTTTCACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGGGAGGAAGAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR CCA 90 bp TGGAAATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTaGAAGCTGCTCTTCGACATGAGCATCAGGGCCCTCATGGGGTGC +
Preference number: 1 (lower is better)
Translates to: WKFWVQRVLSLSLGG*KLLFDMSIRALMGC
Trigger: GCACCCCATGAGGGCCCTGATGCTCATGTCGAAGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435926.5
3UTR GCA 90 bp TCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTTGCTCTTGGCCTaGCTTTGCTGGCAGCAAGCGTTTTATGGGAGGCCCCCACTTTGG +
Preference number: 1 (lower is better)
Translates to: SVHIPWFLGLSLLLA*LCWQQAFYGRPPLW
Trigger: CCAAAGTGGGGGCCTCCCATAAAACGCTTGCTGCCAGCAAAGGCAGGCCAAGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 90 bp CCTTTCTTTGCTCTTGGCCTGCCTTTGCTGGCAGCAAGCGTTTTATaGGAGGCCCCCACTTTGGCAGTTTACACTCTGCAGTCCAAACCC +
Preference number: 1 (lower is better)
Translates to: PFFALGLPLLAASVL*EAPTLAVYTLQSKP
Trigger: GGGTTTGGACTGCAGAGTGTAAACTGCCAAAGTGGGGGCCTCCCATAAAACGCTTGCTGCCAGCAAAGGCAGGCCAAGAGCAAAGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR GCA 90 bp AAATCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTaGATGTTGACAATCCTCACACAGCGTTCAAAGCTGACTAGGATT +
Preference number: 1 (lower is better)
Translates to: KSKVSSGASVAVGSP*MLTILTQRSKLTRI
Trigger: AATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
3UTR GCA 90 bp GTGTTAGTCTCTCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTTaGTCTTGGCCTGCCTTTGCTGGCAGCAAGCGTTTTATGGGAGGC +
Preference number: 1 (lower is better)
Translates to: VLVSQCIFPGFSAFL*SWPAFAGSKRFMGG
Trigger: GCCTCCCATAAAACGCTTGCTGCCAGCAAAGGCAGGCCAAGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGAGAGACTAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 90 bp TGGGGATGGGAGGCAAGAAGCAGGAGGGTGGGCTTACCAAGGGCATaGGAAACTTTCCAGAGTGAAGGGGATGGTGATTATCTTGATTGT +
Preference number: 1 (lower is better)
Translates to: WGWEARSRRVGLPRA*ETFQSEGDGDYLDC
Trigger: ACAATCAAGATAATCACCATCCCCTTCACTCTGGAAAGTTTCCCATGCCCTTGGTAAGCCCACCCTCCTGCTTCTTGCCTCCCATCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR TCA 90 bp CAACTGCAAAGTGGCAATTCCAGAGTTCTGTGCAGGACGCTGCAGTaGTTCCGCCCCACTTGTTTTCACCATCTAGGGAAACGTCCTCTT +
Preference number: 1 (lower is better)
Translates to: QLQSGNSRVLCRTLQ*FRPTCFHHLGKRPL
Trigger: AAGAGGACGTTTCCCTAGATGGTGAAAACAAGTGGGGCGGAATCACTGCAGCGTCCTGCACAGAACTCTGGAATTGCCACTTTGCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR GCA 90 bp AATAAAATATTAATGCATGCAACAGGGATGACTCGCAAATCCTTATaGTCAGCTAAGCAAGAAGCCAGACAAAACACAAGTACATACTGT +
Preference number: 1 (lower is better)
Translates to: NKILMHATGMTRKSL*SAKQEARQNTSTYC
Trigger: ACAGTATGTACTTGTGTTTTGTCTGGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCATTAATATTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR TCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGTCCCCTCAGGTGGGATaGGGATGTCGGGCGTCAGGC +
Preference number: 2 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGSPQVG*GCRASG
Trigger: GCCTGACGCCCGACATCCTCATCCCACCTGAGGGGA...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000435926.5
3UTR-3UTR GCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCCCCTGGTCCAGTTATTaGAGAGGCGTCGGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSPWSSY*RGVGGS
Trigger: GGAGCCCCCGACGCCTCTGCAATAACTGGACCAGGG...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp GCCCGTGGCAGGATGACCTCTCAGGATCCTCCCGCTGCTTCATGGTGGCCCAGGGTGGAGCCCCTTCAGTaGCTCTCGGCAGACGTAGGC +
Preference number: 2 (lower is better)
Translates to: ARGRMTSQDPPAASWWPRVEPLQ*LSADVG
Trigger: GCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCAC...CCTGGGCCACCATGAAGCAGCGGGAGGATCCTGAGAGGTCATCCTGCCACGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp GGCGGCCAGCAGGAAGGTGGCACCCGTGTAGGGGTTCCGCACCACACGACACTGTGGAAGCTCATGGGGTaGAGGTGGAACAGAGGGGGC +
Preference number: 2 (lower is better)
Translates to: GGQQEGGTRVGVPHHTTLWKLMG*RWNRGG
Trigger: GCCCCCTCTGTTCCACCTGCACCCCATGAGCTTCCA...CAGTGTCGTGTGGTGCGGAACCCCTACACGGGTGCCACCTTCCTGCTGGCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433890.5
3UTR-3UTR CCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCGGGCCTGGGCTCCTCTaGTCTAGGATGGGCCCCTTT +
Preference number: 2 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSGPGLL*SRMGPF
Trigger: AAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCC...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGCCCTGGTCCAGTTATTaGAGAGGCGTCGGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGPWSSY*RGVGGS
Trigger: GGAGCCCCCGACGCCTCTGCAATAACTGGACCAGGG...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GGGGAAATCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATTTGGGCACTAGGGACTaGGCTGCCTCGGGGATGGGG +
Preference number: 2 (lower is better)
Translates to: GEIKGQLRCQCGRGLALHLGTRD*AASGMG
Trigger: CCCCATCCCCGAGGCAGCCCAGTCCCTAGTGCCCAA...ATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGCCCCAATTTGGAAGGTaGCCCTCACCCTCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGPQFGR*PSPSLG
Trigger: CCCCAAGGAGGGTGAGGGGCACCTTCCAAATTGGGG...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp CCTCCCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTGCTCAGGTGCCAGTGTaGCCGTGGGCTCGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: PPTAHSVGQFPSCVGRQIAQVPV*PWARPA
Trigger: TGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGC...AATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCGTTTCCCAGGACAAATaGAGGGGCAGGCTCTTGGCA +
Preference number: 2 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSVSQDK*RGRLLA
Trigger: TGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGAAAC...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp ATTGTGTCCCTGTCCACCTGGATCACCTGCTGGGCCGAGCCTGGGATCCCCTCATGGAACAGAGGGGGCTaGAGCTCGCCCAGCTCAATG +
Preference number: 2 (lower is better)
Translates to: IVSLSTWITCWAEPGIPSWNRGG*SSPSSM
Trigger: CATTGAGCTGGGCGAGCTGCAGCCCCCTCTGTTCCA...TGAGGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGACAGGGACACAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATTCCTCTGGTCTAGGATaGGCCCCTTTGCCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: VPLGRRRQSAAPPGAQWHSSGLG*APLPKR
Trigger: CCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGA...ATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435926.5
3UTR-3UTR CCA 90 bp CTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGCAGATTGCAGGGACTCCTCCGGCTGATCAGTGCCTaGGGCAAAAGAGGATGCCCA +
Preference number: 2 (lower is better)
Translates to: LSELGWLTQSKGRLQGLLRLISA*GKRGCP
Trigger: TGGGCATCCTCTTTTGCCCCAGGCACTGATCAGCCG...GAGGAGTCCCTGCAATCTGCCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGCCACTTACCCCACCCTaGTCCCAACATTCCTCCGAG +
Preference number: 2 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGPLTPP*SQHSSE
Trigger: CTCGGAGGAATGTTGGGACCAGGGTGGGGTAAGTGG...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp GGCGGCCAGCAGGAAGGTGGCACCCGTGTAGGGGTTCCGCACCACACGACACTGGCCCCCGGGAGTGAATaGTGTCTGGAAACATGTCAT +
Preference number: 2 (lower is better)
Translates to: GGQQEGGTRVGVPHHTTLAPGSE*CLETCH
Trigger: ATGACATGTTTCCAGACACCATTCACTCCCGGGGGC...CAGTGTCGTGTGGTGCGGAACCCCTACACGGGTGCCACCTTCCTGCTGGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GGCGGCCAGCAGGAAGGTGGCACCCGTGTAGGGGTTCCGCACCACACGACACTGAGTTTCCTTCCTGCGTaGGGCGCCAAATTTCACCTG +
Preference number: 2 (lower is better)
Translates to: GGQQEGGTRVGVPHHTTLSFLPA*GAKFHL
Trigger: CAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACT...CAGTGTCGTGTGGTGCGGAACCCCTACACGGGTGCCACCTTCCTGCTGGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GCAGCCATTGAAGACCTTGGAGAAGCAGGCGCCCATATGCACCTTGGGAGTTGGCCCGCTGCTTCATGGTaGCCCAGGCCGTGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: AAIEDLGEAGAHMHLGSWPAASW*PRPWAA
Trigger: TGCTGCCCACGGCCTGGGCCACCATGAAGCAGCGGG...CCAACTCCCAAGGTGCATATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCCACAGCGTTCAAAGCTaGCTAGGATTGTGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRAHSVQS*LGLCPC
Trigger: ACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTG...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp GTCAGGAATCTTGGTGGACAGAGCAAAGCGCCTGGGGATGATGCGCTGGGTGAGGCCTCCTGGACCGACTaGAGCAGGCTCCCACTCAAC +
Preference number: 2 (lower is better)
Translates to: VRNLGGQSKAPGDDALGEASWTD*SRLPLN
Trigger: GTTGAGTGGGAGCCTGCTGCAGTCGGTCCAGGAGGC...CTCACCCAGCGCATCATCCCCAGGCGCTTTGCTCTGTCCACCAAGATTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp CTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGCAGATTGCAGGGACTCCTCCCTGTCACCTCTACCTaGCTTCTCCAAAACCCTGGG +
Preference number: 2 (lower is better)
Translates to: LSELGWLTQSKGRLQGLLPVTST*LLQNPG
Trigger: CCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGG...GAGGAGTCCCTGCAATCTGCCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp ATTGTGTCCCTGTCCACCTGGATCACCTGCTGGGCCGAGCCTGGGATCCCCTCAGGGGCAAGGGTGCCCTaGATGAGAGTCCCTTTGTTG +
Preference number: 2 (lower is better)
Translates to: IVSLSTWITCWAEPGIPSGARVP*MRVPLL
Trigger: CAACAAAGGGACTCTCATCCAGGGCACCCTTGCCCC...TGAGGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGACAGGGACACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435926.5
3UTR-3UTR CCA 90 bp CCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTTGACTTTCACCAGGATCAGCCCTGGGGGCCCTaGCATTCAGAGCTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: PPPSRSTHHGAPLDFHQDQPWGP*HSELSR
Trigger: TCTGCTCAGCTCTGAATGCCAGGGCCCCCAGGGCTG...ATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCTCAGGTGCCAGTGTaGCCGTGGGCTCGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARAQVPV*PWARPA
Trigger: TGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGC...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp TGGGTGAGGCGGTTGGTGGGGATGGAGAGGGGAACCTGTTGCTGTAGCCTCCGCCCACGGCTCATTCAGTaGGTCAGTTTCCTTCCTGCG +
Preference number: 2 (lower is better)
Translates to: WVRRLVGMERGTCCCSLRPRLIQ*VSFLPA
Trigger: CGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG...GCGGAGGCTACAGCAACAGGTTCCCCTCTCCATCCCCACCAACCGCCTCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGCTGGGGGCAGGGTTCCTaGGGGACTGGACAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: VLQAHHSLDGEIKGQLRCWGQGS*GTGQRL
Trigger: GAGCCTCTGTCCAGTCCCCCAGGAACCCTGCCCCCA...GCACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp TGTGCGTGGATTTCCCTGAGAGTGACAGCAGCACGTTGTTCACGCAGTAGAGCCCCCGCTGCTTCATGGTaGCCCAGGCCGTGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: CAWISLRVTAARCSRSRAPAASW*PRPWAA
Trigger: TGCTGCCCACGGCCTGGGCCACCATGAAGCAGCGGG...GGCTCTACTGCGTGAACAACGTGCTGCTGTCACTCTCAGGGAAATCCACGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp CTGGGTCACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAACCTGGATCACCTGCTaGGCCGAGCCTGGGATCCCC +
Preference number: 2 (lower is better)
Translates to: LGHLIGIQASALHPMAPETWITC*AEPGIP
Trigger: GGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGT...TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp GTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGCGGAGCTGCTGAGTCGTaGACGGGTGCTGCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: VLQAHHSLDGEIKGQLRCGAAES*TGAAGA
Trigger: AGCTCCTGCAGCACCCGTTCACGACTCAGCAGCTCC...GCACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGAGTTCTGAGCAAGGATaGAGGGGAAGGCACAGTGCC +
Preference number: 2 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLSSEQG*RGRHSA
Trigger: GGCACTGTGCCTTCCCCTGCATCCTTGCTCAGAACT...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
3UTR-3UTR GCA 90 bp CCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTTGACTTTCACCAGGATCTCCTGGGCTGCAGCTaGCCAAAGGCTCCAGTCAAG +
Preference number: 2 (lower is better)
Translates to: PPPSRSTHHGAPLDFHQDLLGCS*PKAPVK
Trigger: CTTGACTGGAGCCTTTGGGCAGCTGCAGCCCAGGAG...ATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp CTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGCAGATTGCAGGGACTCCTCTTGCCACCCACCAGGTaGAAAGGTCTTCCTCCAACA +
Preference number: 2 (lower is better)
Translates to: LSELGWLTQSKGRLQGLLLPPTR*KGLPPT
Trigger: TGTTGGAGGAAGACCTTTGCACCTGGTGGGTGGCAA...GAGGAGTCCCTGCAATCTGCCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp CGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGCCGTGGGCTCGCCCTaGATGTTGACAATCCTCACA +
Preference number: 2 (lower is better)
Translates to: RRQSAAPPGAQWHGKSPAAVGSP*MLTILT
Trigger: TGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGC...TGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp GCCCGTGAGGATGTAGAGGTTGCTGTGCGCCTCTGGGTTGTCAGTGGGAATGCTGCCAGCACACTGTCCTaGAGGCACACCACAGTCTCG +
Preference number: 2 (lower is better)
Translates to: AREDVEVAVRLWVVSGNAASTLS*RHTTVS
Trigger: CGAGACTGTGGTGTGCCTGCAGGACAGTGTGCTGGC...AGCATTCCCACTGACAACCCAGAGGCGCACAGCAACCTCTACATCCTCACGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp GTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGCGTGGAGCCCCTTCAGTaGCTCTCGGCAGACGTAGGC +
Preference number: 2 (lower is better)
Translates to: VLQAHHSLDGEIKGQLRCVEPLQ*LSADVG
Trigger: GCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCAC...GCACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGGCTTCTCCAAAACCCTaGGGGCCCTGCCCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQASPKP*GPCPSV
Trigger: CACAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGC...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp AAACCTAAGGAAAGTAAAGCTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGGGAGGACGCCCTCCCTaGGGGCTGGTCTGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: KPKESKAQRAGVAHPVQGGGRPP*GLVCFW
Trigger: CCAGAAACAGACCAGCCCCCAGGGAGGGCGTCCTCC...CCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAGCTTTACTTTCCTTAGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp GGGGAAATCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATGTTGCTGTGCGCCTCTaGGTTGTCAGTGGGAATGCT +
Preference number: 2 (lower is better)
Translates to: GEIKGQLRCQCGRGLALHVAVRL*VVSGNA
Trigger: AGCATTCCCACTGACAACCCAGAGGCGCACAGCAAC...ATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
3UTR CAA 90 bp CGGCAGATCCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTaGACTTTCACCAGGATGACTCCGGGTATGGGCCAGTTACCTGAA +
Preference number: 2 (lower is better)
Translates to: RQILRRPEAHIMVLP*TFTRMTPGMGQLPE
Trigger: TTCAGGTAACTGGCCCATACCCGGAGTCATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGGATCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR TCA 90 bp GATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGCTCGCCCTGCATGTTaGCAATCCTCACACAGCGTT +
Preference number: 2 (lower is better)
Translates to: DLPLRMQVVEPLQCLSADARPAC*QSSHSV
Trigger: AACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGC...GTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp GGGGAAATCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATACAAGCGGTCATTCCTaGGGTAGCTGCCAATGTAGG +
Preference number: 2 (lower is better)
Translates to: GEIKGQLRCQCGRGLALHTSGHS*GSCQCR
Trigger: CCTACATTGGCAGCTACCTCAGGAATGACCGCTTGT...ATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp TGTGCGTGGATTTCCCTGAGAGTGACAGCAGCACGTTGTTCACGCAGTAGAGCCCGCTGTCAGCTCGCCTaGCACCCCAAAGTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: CAWISLRVTAARCSRSRARCQLA*HPKVSQ
Trigger: CTGGCTGACTTTGGGGTGTCAGGCGAGCTGACAGCG...GGCTCTACTGCGTGAACAACGTGCTGCTGTCACTCTCAGGGAAATCCACGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGGCAGAGCCCTCAAACTaGAAAGCTGAGGGTCAGTTC +
Preference number: 2 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLAEPSN*KAEGQF
Trigger: GAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGC...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
3UTR-3UTR GCA 90 bp CCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTTGACTTTCACCAGGATGCCATGCCCTCAAGATaGAGGCTCCAGCAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: PPPSRSTHHGAPLDFHQDAMPSR*RLQQGG
Trigger: TCCTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGC...ATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGGCCTACTCGCATGGCTaGCATCCACCTACCACGTCA +
Preference number: 2 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQAYSHG*HPPTTS
Trigger: TGACGTGGTAGGTGGATGGCAGCCATGCGAGTAGGC...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp TCTGTGGATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCCGTGGGCTCGCCCTaGATGTTGACAATCCTCACA +
Preference number: 2 (lower is better)
Translates to: SVDLPLRMQVVEPLQCLSAVGSP*MLTILT
Trigger: TGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGC...CGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGAACCCTCCCAGTCACTaGACAGAGTCAGAACAGTTG +
Preference number: 2 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGNPPSH*TESEQL
Trigger: CAACTGTTCTGACTCTGTCCAGTGACTGGGAGGGTT...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp CCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTTGACTTTCACCAGGATGGCACTGTCTGCTGCTaGCCGGTTGGTGAACGGAAA +
Preference number: 2 (lower is better)
Translates to: PPPSRSTHHGAPLDFHQDGTVCC*PVGERK
Trigger: TTTCCGTTCACCAACCGGCCAGCAGCAGACAGTGCC...ATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp AGTCTTATCTCTCAGTTTGGGCGGCTGGAAGCTGCTCTTCGACATGAGCATCAGGCTCAGGTGCCAGTGTaGCCGTGGGCTCGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: SLISQFGRLEAALRHEHQAQVPV*PWARPA
Trigger: TGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGC...CTGATGCTCATGTCGAAGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435926.5
3UTR-3UTR CCA 90 bp GCCCGTGGCAGGATGACCTCTCAGGATCCTCCCGCTGCTTCATGGTGGCCCAGGACACCACAGTCTCGATaGGGAAATCAAAGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: ARGRMTSQDPPAASWWPRTPQSR*GNQRSA
Trigger: AGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGT...CCTGGGCCACCATGAAGCAGCGGGAGGATCCTGAGAGGTCATCCTGCCACGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GTCAGGAATCTTGGTGGACAGAGCAAAGCGCCTGGGGATGATGCGCTGGGTGAGCCTCCAGGGGCCCAGTaGCATGGTAAATCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: VRNLGGQSKAPGDDALGEPPGAQ*HGKSPA
Trigger: TGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGG...CTCACCCAGCGCATCATCCCCAGGCGCTTTGCTCTGTCCACCAAGATTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp AAGTTCTTCAGCAGCAGAAACTTCTGCAGCGGCTCATACCACTGCAGCAGGAGCCGGCCAGCAGGAAGGTaGCACCCGTGTAGGGGTTCC +
Preference number: 2 (lower is better)
Translates to: KFFSSRNFCSGSYHCSRSRPAGR*HPCRGS
Trigger: GGAACCCCTACACGGGTGCCACCTTCCTGCTGGCCG...GCTCCTGCTGCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCTGAAGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGAAGGAGGCGGGAGATaGGGTGGGTTCACTCCCCCT +
Preference number: 2 (lower is better)
Translates to: RPETFLRITSDLQPQQGQEGGGR*GGFTPP
Trigger: AGGGGGAGTGAACCCACCTCATCTCCCGCCTCCTTC...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
3UTR-3UTR TCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGGATCGTGCTGTCATCTaGTGTTCCTGGTCTAACACC +
Preference number: 2 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLDRAVI*CSWSNT
Trigger: GGTGTTAGACCAGGAACATCAGATGACAGCACGATC...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR TCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGCACCCTGGGAACCACTaGGCCTACTCGCATGGCTGC +
Preference number: 2 (lower is better)
Translates to: RPETFLRITSDLQPQQGQHPGNH*AYSHGC
Trigger: GCAGCCATGCGAGTAGGCTCAGTGGTTCCCAGGGTG...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp GATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACCTCCGCAGAACTCCATaGAGATCCACAAGCGGTCAT +
Preference number: 2 (lower is better)
Translates to: DLPLRMQVVEPLQCLSADLRRTP*RSTSGH
Trigger: ATGACCGCTTGTGGATCTGCATGGAGTTCTGCGGAG...GTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
3UTR-3UTR CCA 90 bp CACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAGGCCAGTCCTCTGGTCTAGGATaGGCCCCTTTGCCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: HLIGIQASALHPMAPEGQSSGLG*APLPKR
Trigger: CCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGA...CTGGCCTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGTTGGGCACTAGGGACTaGGCTGCCTCGGGGATGGGG +
Preference number: 2 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWLGTRD*AASGMG
Trigger: CCCCATCCCCGAGGCAGCCCAGTCCCTAGTGCCCAA...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp CTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGCAGATTGCAGGGACTCCTCATGGGTGTGAATGCCTaGTGTGAAGAGATGTGTTCC +
Preference number: 2 (lower is better)
Translates to: LSELGWLTQSKGRLQGLLMGVNA*CEEMCS
Trigger: GGAACACATCTCTTCACACCAGGCATTCACACCCAT...GAGGAGTCCCTGCAATCTGCCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGTCCCCAGGGCGCCTTTaGTCAGGGCCTTTGCTGAGC +
Preference number: 2 (lower is better)
Translates to: RPETFLRITSDLQPQQGQSPGRL*SGPLLS
Trigger: GCTCAGCAAAGGCCCTGACCAAAGGCGCCCTGGGGA...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp GGCCCTAGGAACGGGGCCCGCTTGATGGTTCCCATGGTATCGTCTGGGGAGTCCTCATCTGTGATCTCCTaGGTCACCTCATTGGTATCC +
Preference number: 2 (lower is better)
Translates to: GPRNGARLMVPMVSSGESSSVIS*VTSLVS
Trigger: GGATACCAATGAGGTGACCCAGGAGATCACAGATGA...GGACTCCCCAGACGATACCATGGGAACCATCAAGCGGGCCCCGTTCCTAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp CTGGGTCACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAGGGGAGTCCAGCTCCTaGAATTCTGAGGCTGACCGA +
Preference number: 2 (lower is better)
Translates to: LGHLIGIQASALHPMAPEGESSS*NSEADR
Trigger: TCGGTCAGCCTCAGAATTCCAGGAGCTGGACTCCCC...TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTGACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GCAGCACGTTGTTCACGCAGTAGAGCCAGGAGCAGCGATGTGAAATCAGCTTCTCAGAGGCTCCTCTGCTaGAGGGTCAGTGGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: AARCSRSRARSSDVKSASQRLLC*RVSGEW
Trigger: CCACTCCCCACTGACCCTCCAGCAGAGGAGCCTCTG...AGAAGCTGATTTCACATCGCTGCTCCTGGCTCTACTGCGTGAACAACGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR CAA 90 bp TTATTGCCACCCACCAGGTGCAAAGGTCTTCCTCCAACACCTGCCTaGAATGTAGGGGTGACCATGGGGCCTTTGCTCCAGCTGTTCCCC +
Preference number: 2 (lower is better)
Translates to: LLPPTRCKGLPPTPA*NVGVTMGPLLQLFP
Trigger: GGGGAACAGCTGGAGCAAAGGCCCCATGGTCACCCCTACATTCAAGGCAGGTGTTGGAGGAAGACCTTTGCACCTGGTGGGTGGCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp GAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTCTCCGCAGAACTCCATaGAGATCCACAAGCGGTCAT +
Preference number: 2 (lower is better)
Translates to: ENAGGGAPSVPLGRRRQSLRRTP*RSTSGH
Trigger: ATGACCGCTTGTGGATCTGCATGGAGTTCTGCGGAG...AGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
3UTR-3UTR GCA 90 bp GCAGCCATTGAAGACCTTGGAGAAGCAGGCGCCCATATGCACCTTGGGAGTTGGCATTGTAGCCACCTTTaGGCTCCACAGCAGCCACCT +
Preference number: 2 (lower is better)
Translates to: AAIEDLGEAGAHMHLGSWHCSHL*APQQPP
Trigger: AGGTGGCTGCTGTGGAGCGCAAAGGTGGCTACAATG...CCAACTCCCAAGGTGCATATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGTGCTGTAGCCTCCGCTaGTCAAACAGGCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: RPETFLRITSDLQPQQGQCCSLR*SNRPGR
Trigger: CCTCCCAGGCCTGTTTGAGCAGCGGAGGCTACAGCA...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435926.5
3UTR-3UTR CCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGGGGCCTGGGCTCCTCTaGTCTAGGATGGGCCCCTTT +
Preference number: 2 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWGPGLL*SRMGPF
Trigger: AAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCC...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCGGCCTTGCATCCCATaGCTCCAGAAGGCCAGCACA +
Preference number: 2 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLRPCIP*LQKAST
Trigger: TGTGCTGGCCTTCTGGAGCCATGGGATGCAAGGCCG...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GCAGCACGTTGTTCACGCAGTAGAGCCAGGAGCAGCGATGTGAAATCAGCTTCTCGGCCTTGCATCCCATaGCTCCAGAAGGCCAGCACA +
Preference number: 2 (lower is better)
Translates to: AARCSRSRARSSDVKSASRPCIP*LQKAST
Trigger: TGTGCTGGCCTTCTGGAGCCATGGGATGCAAGGCCG...AGAAGCTGATTTCACATCGCTGCTCCTGGCTCTACTGCGTGAACAACGTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTCGGCCTTGCATCCCATaGCTCCAGAAGGCCAGCACA +
Preference number: 2 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPRPCIP*LQKAST
Trigger: TGTGCTGGCCTTCTGGAGCCATGGGATGCAAGGCCG...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GTGTCCACTCTTCCTCCCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGCCTGGGTCACCTCATTaGTATCCAGGCTTCGGCCTT +
Preference number: 2 (lower is better)
Translates to: VSTLPPTAHSVGQFPSCVPGSPH*YPGFGL
Trigger: AAGGCCGAAGCCTGGATACCAATGAGGTGACCCAGG...CACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGGGAGGAAGAGTGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGCAGGATGATGTCTCTGTaGGCCCCAAGCACTCGGAAG +
Preference number: 2 (lower is better)
Translates to: VLQAHHSLDGEIKGQLRCRMMSL*APSTRK
Trigger: CTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCT...GCACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GGCCCTAGGAACGGGGCCCGCTTGATGGTTCCCATGGTATCGTCTGGGGAGTCCAAGTGGTGGAAATTCTaGGTCCAGCGAGTCTTATCT +
Preference number: 2 (lower is better)
Translates to: GPRNGARLMVPMVSSGESKWWKF*VQRVLS
Trigger: AGATAAGACTCGCTGGACCCAGAATTTCCACCACTT...GGACTCCCCAGACGATACCATGGGAACCATCAAGCGGGCCCCGTTCCTAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGGCCAGTTTGAGAAAGTaGTGGAAATTCTGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLASLRK*WKFWVQ
Trigger: CTGGACCCAGAATTTCCACCACTTTCTCAAACTGGC...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435926.5
3UTR-3UTR CCA 90 bp GCAGCCATTGAAGACCTTGGAGAAGCAGGCGCCCATATGCACCTTGGGAGTTGGCCAGATGAGGGTCACTaGCTTTGTCCAGCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: AAIEDLGEAGAHMHLGSWPDEGH*LCPAAV
Trigger: CACAGCTGCTGGACAAAGCCAGTGACCCTCATCTGG...CCAACTCCCAAGGTGCATATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp CCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACGAAGGTTGGCTCCCTTaGTGTCTCTGTGGATCTTCC +
Preference number: 2 (lower is better)
Translates to: PRLIQWVSFLPAWGAKFHEGWLP*CLCGSS
Trigger: GGAAGATCCACAGAGACATCAAGGGAGCCAACCTTC...GTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp TTGACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCGGAGCTGCTGAGTCGTaGACGGGTGCTGCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: LTILTQRSKLTRIVSLSTGAAES*TGAAGA
Trigger: AGCTCCTGCAGCACCCGTTCACGACTCAGCAGCTCC...GGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp CACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAGGCCAGGCAGTTCATGCAGGTTaGGTGTGTAGATGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: HLIGIQASALHPMAPEGQAVHAG*VCRCLP
Trigger: AGGAAGGCATCTACACACTCAACCTGCATGAACTGC...CTGGCCTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp CCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTTGACTTTCACCAGGATTCTTCCTCCAACACCTaGCTTGAATGTAGGGGTGAC +
Preference number: 2 (lower is better)
Translates to: PPPSRSTHHGAPLDFHQDSSSNT*LECRGD
Trigger: GTCACCCCTACATTCAAGGCAGGTGTTGGAGGAAGA...ATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp CTGGGTCACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAACTCCGCAGAACTCCATaGAGATCCACAAGCGGTCAT +
Preference number: 2 (lower is better)
Translates to: LGHLIGIQASALHPMAPELRRTP*RSTSGH
Trigger: ATGACCGCTTGTGGATCTGCATGGAGTTCTGCGGAG...TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTGACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp GCAGCCATTGAAGACCTTGGAGAAGCAGGCGCCCATATGCACCTTGGGAGTTGGAGTTTCCTTCCTGCGTaGGGCGCCAAATTTCACCTG +
Preference number: 2 (lower is better)
Translates to: AAIEDLGEAGAHMHLGSWSFLPA*GAKFHL
Trigger: CAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACT...CCAACTCCCAAGGTGCATATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp CTCTCCAGGATGATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCAGGCTGGGCAGAGGGCTaGAGAAGTTCTTCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LSRMMSLWAPSTRKILVSGWAEG*RSSSAA
Trigger: TGCTGCTGAAGAACTTCTCCAGCCCTCTGCCCAGCC...TGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCTGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR CAA 90 bp GCATATTCCCTGGTTTCTCGGCCTTTCTTTGCTCTTGGCCTGCCTTaGCTGGCAGCAAGCGTTTTATGGGAGGCCCCCACTTTGGCAGTT +
Preference number: 2 (lower is better)
Translates to: AYSLVSRPFFALGLP*LAASVLWEAPTLAV
Trigger: AACTGCCAAAGTGGGGGCCTCCCATAAAACGCTTGCTGCCAGCAAAGGCAGGCCAAGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 90 bp AGTCTCTCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTTGCTCTaGGCCTGCCTTTGCTGGCAGCAAGCGTTTTATGGGAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SLSVHIPWFLGLSLL*ACLCWQQAFYGRPP
Trigger: TGGGGGCCTCCCATAAAACGCTTGCTGCCAGCAAAGGCAGGCCAAGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGAGAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp CCTTGGGAGTCTGGTAGACGGACACAGGCTAGCCTTCCCATCCAATCTGATGATGTTTCCCAGGACAAATaGAGGGGCAGGCTCTTGGCA +
Preference number: 2 (lower is better)
Translates to: PWESGRRTQASLPIQSDDVSQDK*RGRLLA
Trigger: TGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGAAAC...ATCATCAGATTGGATGGGAAGGCTAGCCTGTGTCCGTCTACCAGACTCCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGTCCTCTGGTCTAGGATaGGCCCCTTTGCCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: RPETFLRITSDLQPQQGQSSGLG*APLPKR
Trigger: CCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGA...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp AAAGTGTTAGTCTCTCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTTGCTCTTCTGGGGGCTCCTCCTaGGCCCTTCCAGGGGTCACC +
Preference number: 2 (lower is better)
Translates to: KVLVSQCIFPGFSAFLCSSGGSS*ALPGVT
Trigger: GGTGACCCCTGGAAGGGCCCAGGAGGAGCCCCCAGA...AGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGAGAGACTAACACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGCCTGGGTCACCTCATTaGTATCCAGGCTTCGGCCTT +
Preference number: 2 (lower is better)
Translates to: RPETFLRITSDLQPQQGQPGSPH*YPGFGL
Trigger: AAGGCCGAAGCCTGGATACCAATGAGGTGACCCAGG...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp AAGTGGTGGAAATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGGGTTGCTGTGCGCCTCTaGGTTGTCAGTGGGAATGCT +
Preference number: 2 (lower is better)
Translates to: KWWKFWVQRVLSLSLGGWVAVRL*VVSGNA
Trigger: AGCATTCCCACTGACAACCCAGAGGCGCACAGCAAC...CCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATTTCCACCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp CAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCTGGTGAAACTGCACAGCGTTCAAAGCTaGCTAGGATTGTGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: QWVSFLPAWGAKFHLVKLHSVQS*LGLCPC
Trigger: ACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTG...CAGTTTCACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp ATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCATCTGTGATCTCCGCTCGCCCTGCATGTTaGCAATCCTCACACAGCGTT +
Preference number: 2 (lower is better)
Translates to: MSLWAPSTRKILVSSVISARPAC*QSSHSV
Trigger: AACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGC...GGAGATCACAGATGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGGAATGCTCTCCAGGATaGTGTCTCTGTGGGCCCCAA +
Preference number: 2 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWECSPG*CLCGPQ
Trigger: TTGGGGCCCACAGAGACATCATCCTGGAGAGCATTC...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp TTGACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCTGCTCTGGTGGCCCGTaGGGATGTAGAGGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: LTILTQRSKLTRIVSLSTCSGGP*GCRGCC
Trigger: ACAGCAACCTCTACATCCTCACGGGCCACCAGAGCA...GGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp TCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCTGGTGAAACTACAAGCGGTCATTCCTaGGGTAGCTGCCAATGTAGG +
Preference number: 2 (lower is better)
Translates to: SVGQFPSCVGRQISPGETTSGHS*GSCQCR
Trigger: CCTACATTGGCAGCTACCTCAGGAATGACCGCTTGT...AGTTTCACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp CCTCTTCTTAGGATTCTTGGTCAGGGCCAGTTTGAGAAAGTGGTGGAAATTCTGCGCTGTCAGCTCGCCTaGCACCCCAAAGTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: PLLRILGQGQFEKVVEILRCQLA*HPKVSQ
Trigger: CTGGCTGACTTTGGGGTGTCAGGCGAGCTGACAGCG...CAGAATTTCCACCACTTTCTCAAACTGGCCCTGACCAAGAATCCTAAGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp AAACCTAAGGAAAGTAAAGCTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGTGGCAGTTTACACTCTaGAGTCCAAACCCCGTTTCC +
Preference number: 2 (lower is better)
Translates to: KPKESKAQRAGVAHPVQGWQFTL*SPNPVS
Trigger: GGAAACGGGGTTTGGACTGCAGAGTGTAAACTGCCA...CCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAGCTTTACTTTCCTTAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGGTGTTAGTCTCTCAGTaGATATTCCCTGGTTTCTCG +
Preference number: 2 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQVLVSQ*IFPGFS
Trigger: CGAGAAACCAGGGAATATGCACTGAGAGACTAACAC...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp GTTAGGAATTCACTTTGTATCCCTGTTACCACCGACCCCAATTTGGAAGGTGCCGGCCCTGCCCTTCTGTaGTGCCCACAGAAACGTGTG +
Preference number: 2 (lower is better)
Translates to: VRNSLCIPVTTDPNLEGAGPALL*CPQKRV
Trigger: CACACGTTTCTGTGGGCACCACAGAAGGGCAGGGCC...GGCACCTTCCAAATTGGGGTCGGTGGTAACAGGGATACAAAGTGAATTCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp AAACCTAAGGAAAGTAAAGCTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGCAAGCTACAGGAGAATaGCCATGCCCTCAAGATGCA +
Preference number: 2 (lower is better)
Translates to: KPKESKAQRAGVAHPVQGQATGE*PCPQDA
Trigger: TGCATCTTGAGGGCATGGCCATTCTCCTGTAGCTTG...CCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAGCTTTACTTTCCTTAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp CCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACACACCACAGTCTCGATaGGGAAATCAAAGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: PRLIQWVSFLPAWGAKFHTPQSR*GNQRSA
Trigger: AGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGT...GTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR CAA 90 bp AAGTGCAGATTAACCTGTAGTGACAGAAAGCAGCACAGTTGTTACTaGGGGATGGGAGGCAAGAAGCAGGAGGGTGGGCTTACCAAGGGC +
Preference number: 2 (lower is better)
Translates to: KCRLTCSDRKQHSCY*GMGGKKQEGGLTKG
Trigger: GCCCTTGGTAAGCCCACCCTCCTGCTTCTTGCCTCCCATCCCCAAGTAACAACTGTGCTGCTTTCTGTCACTACAGGTTAATCTGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR TCA 90 bp AAGTGGTGGAAATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGGCACAGCGTTCAAAGCTaGCTAGGATTGTGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: KWWKFWVQRVLSLSLGGWHSVQS*LGLCPC
Trigger: ACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTG...CCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATTTCCACCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp CCATCTAGGGAAACGTCCTCTTCGTTTTTGGTCTTGTCTTTCAAGCGAGTTCTAAAACCCTGGGGGCCCTaGCCTTCTGTGGTGCCCACA +
Preference number: 2 (lower is better)
Translates to: PSRETSSSFLVLSFKRVLKPWGP*PSVVPT
Trigger: TGTGGGCACCACAGAAGGGCAGGGCCCCCAGGGTTT...TAGAACTCGCTTGAAAGACAAGACCAAAAACGAAGAGGACGTTTCCCTAGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp TGTGCGTGGATTTCCCTGAGAGTGACAGCAGCACGTTGTTCACGCAGTAGAGCCGCCAGTTTGAGAAAGTaGTGGAAATTCTGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: CAWISLRVTAARCSRSRAASLRK*WKFWVQ
Trigger: CTGGACCCAGAATTTCCACCACTTTCTCAAACTGGC...GGCTCTACTGCGTGAACAACGTGCTGCTGTCACTCTCAGGGAAATCCACGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp CTCTCCAGGATGATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCATCTTATCTCTCAGTTTaGGCGGCTGGAAGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: LSRMMSLWAPSTRKILVSSYLSV*AAGSCS
Trigger: AGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGA...TGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCTGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435926.5
3UTR CAA 90 bp AGTGTTAGTCTCTCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTaGCTCTTGGCCTGCCTTTGCTGGCAGCAAGCGTTTTATGGGAGG +
Preference number: 2 (lower is better)
Translates to: SVSLSVHIPWFLGLS*LLACLCWQQAFYGR
Trigger: CCTCCCATAAAACGCTTGCTGCCAGCAAAGGCAGGCCAAGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGAGAGACTAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp ATGCATGCAACAGGGATGACTCGCAAATCCTTATGCTCAGCTAAGCAAGAAGCCAGTTCTGAGCAAGGATaGAGGGGAAGGCACAGTGCC +
Preference number: 2 (lower is better)
Translates to: MHATGMTRKSLCSAKQEASSEQG*RGRHSA
Trigger: GGCACTGTGCCTTCCCCTGCATCCTTGCTCAGAACT...GGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp ATGCATGCAACAGGGATGACTCGCAAATCCTTATGCTCAGCTAAGCAAGAAGCCAGAGCGGCTGATCAGTaGCTGGGGCAAAAGAGGATG +
Preference number: 2 (lower is better)
Translates to: MHATGMTRKSLCSAKQEARAADQ*LGQKRM
Trigger: CATCCTCTTTTGCCCCAGGCACTGATCAGCCGCTCT...GGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp AAGTTCTTCAGCAGCAGAAACTTCTGCAGCGGCTCATACCACTGCAGCAGGAGCTCCAGCGTATCCTCATaGAGTTCATGCAGGTTGAGT +
Preference number: 2 (lower is better)
Translates to: KFFSSRNFCSGSYHCSRSSSVSS*SSCRLS
Trigger: ACTCAACCTGCATGAACTGCATGAGGATACGCTGGA...GCTCCTGCTGCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCTGAAGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR GCA 90 bp TTGACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCTCATGGGCCCAGATGTaGGTGGATTTCCCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: LTILTQRSKLTRIVSLSTSWAQM*VDFPES
Trigger: ACTCTCAGGGAAATCCACGCACATCTGGGCCCATGA...GGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp AAGTTCTTCAGCAGCAGAAACTTCTGCAGCGGCTCATACCACTGCAGCAGGAGCATCTGCATGAGTCCTTaGGGTGCTAAACTACAGCAG +
Preference number: 2 (lower is better)
Translates to: KFFSSRNFCSGSYHCSRSICMSP*GAKLQQ
Trigger: CTGCTGTAGTTTAGCACCCCAAGGACTCATGCAGAT...GCTCCTGCTGCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCTGAAGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435926.5
3UTR CAA 90 bp TTCTCTGCTGTCGGCCTCTTCTTAGGATTCTTGGTCAGGGCCAGTTaGAGAAAGTGGTGGAAATTCTGGGTCCAGCGAGTCTTATCTCTC +
Preference number: 2 (lower is better)
Translates to: FSAVGLFLGFLVRAS*RKWWKFWVQRVLSL
Trigger: GAGAGATAAGACTCGCTGGACCCAGAATTTCCACCACTTTCTCAAACTGGCCCTGACCAAGAATCCTAAGAAGAGGCCGACAGCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR TCA 90 bp AAAGTGTTAGTCTCTCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTTGCTCTGCTGAGGGTCAGTTCTaGGCAAGGATGCAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: KVLVSQCIFPGFSAFLCSAEGQF*ARMQGK
Trigger: CTTCCCCTGCATCCTTGCTCAGAACTGACCCTCAGC...AGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGAGAGACTAACACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR TCA 90 bp TCTGGAAAATTGGAAGTTAGGAATTCACTTTGTATCCCTGTTACCACCGACCCCCCTGGCATTCAGAGCTaGGCAGACAGACCCTTGGAG +
Preference number: 2 (lower is better)
Translates to: SGKLEVRNSLCIPVTTDPPGIQS*ADRPLE
Trigger: CTCCAAGGGTCTGTCTGCTCAGCTCTGAATGCCAGG...GGGGTCGGTGGTAACAGGGATACAAAGTGAATTCCTAACTTCCAATTTTCCAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR TCA 90 bp CCTCTTCTTAGGATTCTTGGTCAGGGCCAGTTTGAGAAAGTGGTGGAAATTCTGGCTCGCCCTGCATGTTaGCAATCCTCACACAGCGTT +
Preference number: 2 (lower is better)
Translates to: PLLRILGQGQFEKVVEILARPAC*QSSHSV
Trigger: AACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGC...CAGAATTTCCACCACTTTCTCAAACTGGCCCTGACCAAGAATCCTAAGAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CCA 90 bp AAAGTGTTAGTCTCTCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTTGCTCTAACTCTGCTGGAGGGTaGCTGAGGGGACAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: KVLVSQCIFPGFSAFLCSNSAGG*LRGQCD
Trigger: GTCACACTGTCCCCTCAGCCACCCTCCAGCAGAGTT...AGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGAGAGACTAACACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp AAAGTGTTAGTCTCTCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTTGCTCTCCTGCCCTTCTGTGGTaGCCACAGAAACGTGTGTTG +
Preference number: 2 (lower is better)
Translates to: KVLVSQCIFPGFSAFLCSPALLW*PQKRVL
Trigger: CAACACACGTTTCTGTGGGCACCACAGAAGGGCAGG...AGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGAGAGACTAACACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR GCA 90 bp CCATCTAGGGAAACGTCCTCTTCGTTTTTGGTCTTGTCTTTCAAGCGAGTTCTAACAGGAGAATGGCCATaGCCTCAAGATGCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: PSRETSSSFLVLSFKRVLTGEWP*PQDAGS
Trigger: GGAGCCTGCATCTTGAGGGCATGGCCATTCTCCTGT...TAGAACTCGCTTGAAAGACAAGACCAAAAACGAAGAGGACGTTTCCCTAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CCA 90 bp CCATCTAGGGAAACGTCCTCTTCGTTTTTGGTCTTGTCTTTCAAGCGAGTTCTAGACAGTGTGACACCCTaGGAACCACTGAGCCTACTC +
Preference number: 2 (lower is better)
Translates to: PSRETSSSFLVLSFKRVLDSVTP*EPLSLL
Trigger: GAGTAGGCTCAGTGGTTCCCAGGGTGTCACACTGTC...TAGAACTCGCTTGAAAGACAAGACCAAAAACGAAGAGGACGTTTCCCTAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 90 bp CAAGGGCATGGGAAACTTTCCAGAGTGAAGGGGATGGTGATTATCTaGATTGTGGAAATAGCTTCACGGGTGTACACGTATGTCAAAAGT +
Preference number: 2 (lower is better)
Translates to: QGHGKLSRVKGMVII*IVEIASRVYTYVKS
Trigger: ACTTTTGACATACGTGTACACCCGTGAAGCTATTTCCACAATCAAGATAATCACCATCCCCTTCACTCTGGAAAGTTTCCCATGCCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 90 bp ATTATGTCTGTTACAGTATTTCTGATCCTCCTGACAGCCCTGCAGTaGGCTTTGGATATGGTAAACCTAAGGAAAGTAAAGCTCAGCGAG +
Preference number: 2 (lower is better)
Translates to: IMSVTVFLILLTALQ*ALDMVNLRKVKLSE
Trigger: CTCGCTGAGCTTTACTTTCCTTAGGTTTACCATATCCAAAGCCAACTGCAGGGCTGTCAGGAGGATCAGAAATACTGTAACAGACATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR TCA 90 bp CCATCTAGGGAAACGTCCTCTTCGTTTTTGGTCTTGTCTTTCAAGCGAGTTCTAACCTACCACCAAACCTaGGAGCTAAGATATTACCAA +
Preference number: 2 (lower is better)
Translates to: PSRETSSSFLVLSFKRVLTYHQT*ELRYYQ
Trigger: TTGGTAATATCTTAGCTCTCAGGTTTGGTGGTAGGT...TAGAACTCGCTTGAAAGACAAGACCAAAAACGAAGAGGACGTTTCCCTAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 72 bp GCAGCAGCCTCCATGGGAATGGAGGGAACAGCCCTCTaGGGGCTCCTCCTGGGCCCTTCCAGGGGTCACCCA +
Preference number: 3 (lower is better)
Translates to: AAASMGMEGTAL*GLLLGPSRGHP
Trigger: TGGGTGACCCCTGGAAGGGCCCAGGAGGAGCCCCCAGAGGGCTGTTCCCTCCATTCCCATGGAGGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 72 bp CTGGTGAAACTGGATCTCCGAGGGGGTCCTCTCGGCTaGGCCGTGCTGCCCCCGGGAGTGAATGGTGTCTGG +
Preference number: 3 (lower is better)
Translates to: LVKLDLRGGPLG*AVLPPGVNGVW
Trigger: CCAGACACCATTCACTCCCGGGGGCAGCACGGCCCAGCCGAGAGGACCCCCTCGGAGATCCAGTTTCACCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR TCA 72 bp AGTCCTCCCCAGGGCGCCTTTGGTCAGGGCCTTTGCTaGGCAGGAGCTCACCTCCCTGTCCCCACTTACCCC +
Preference number: 3 (lower is better)
Translates to: SPPQGAFGQGLC*AGAHLPVPTYP
Trigger: GGGGTAAGTGGGGACAGGGAGGTGAGCTCCTGCTCAGCAAAGGCCCTGACCAAAGGCGCCCTGGGGAGGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CAA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGCCCCTGGTCCAGTTATaGCAGAGGCGTCGGGGGCTC +
Preference number: 3 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLPLVQL*QRRRGL
Trigger: GAGCCCCCGACGCCTCTGCAATAACTGGACCAGGGG...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
3UTR-3UTR CAA 90 bp CAGGATGACCTCTCAGGATCCTCCCGCTGCTTCATGGTGGCCCAGGCCGTGGGCCTGTGCGCCTCTGGGTaGTCAGTGGGAATGCTCTCC +
Preference number: 3 (lower is better)
Translates to: QDDLSGSSRCFMVAQAVGLCASG*SVGMLS
Trigger: GGAGAGCATTCCCACTGACAACCCAGAGGCGCACAG...GCCCACGGCCTGGGCCACCATGAAGCAGCGGGAGGATCCTGAGAGGTCATCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR GCA 72 bp GTCCGGGAAGATCCGCCACAAGGAGGCACTGTCTGCTaGTGGCCGGTTGGTGAACGGAAAGCCAGTCCTCCC +
Preference number: 3 (lower is better)
Translates to: VREDPPQGGTVC*WPVGERKASPP
Trigger: GGGAGGACTGGCTTTCCGTTCACCAACCGGCCAGCAGCAGACAGTGCCTCCTTGTGGCGGATCTTCCCGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 72 bp CGGGAAGATCCGCCACAAGGAGGCACTGTCTGCTGCTaGCCGGTTGGTGAACGGAAAGCCAGTCCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: REDPPQGGTVCC*PVGERKASPPQ
Trigger: CTGGGGAGGACTGGCTTTCCGTTCACCAACCGGCCAGCAGCAGACAGTGCCTCCTTGTGGCGGATCTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CAA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGCTAGGATGGGCCCCTTaGCCCAAAAGGGCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLLGWAP*PKRACS
Trigger: GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAG...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
3UTR-3UTR CAA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGACCACCGACCCCAATTaGGAAGGTGCCCCTCACCCT +
Preference number: 3 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGTTDPN*EGAPHP
Trigger: AGGGTGAGGGGCACCTTCCAAATTGGGGTCGGTGGT...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CAA 90 bp CAGGATGACCTCTCAGGATCCTCCCGCTGCTTCATGGTGGCCCAGGCCGTGGGCATCCAGGCTTCGGCCTaGCATCCCATGGCTCCAGAA +
Preference number: 3 (lower is better)
Translates to: QDDLSGSSRCFMVAQAVGIQASA*HPMAPE
Trigger: TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGAT...GCCCACGGCCTGGGCCACCATGAAGCAGCGGGAGGATCCTGAGAGGTCATCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CAA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGTCTGCTGCTGGCCGGTaGGTGAACGGAAAGCCAGTC +
Preference number: 3 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLSAAGR*VNGKPV
Trigger: GACTGGCTTTCCGTTCACCAACCGGCCAGCAGCAGA...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CAA 90 bp CTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGCAGATTGCAGGGACTCCTCTGGGAGGCCCCCACTTaGGCAGTTTACACTCTGCAG +
Preference number: 3 (lower is better)
Translates to: LSELGWLTQSKGRLQGLLWEAPT*AVYTLQ
Trigger: CTGCAGAGTGTAAACTGCCAAAGTGGGGGCCTCCCA...GAGGAGTCCCTGCAATCTGCCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR GCA 72 bp CTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGTGGTaGCCACAGAAACGTGTGTTGGAGGGAAGGAGGCGG +
Preference number: 3 (lower is better)
Translates to: LLQNPGGPALLW*PQKRVLEGRRR
Trigger: CCGCCTCCTTCCCTCCAACACACGTTTCTGTGGGCACCACAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
3UTR GCA 72 bp GAGGTCCGGGAAGATCCGCCACAAGGAGGCACTGTCTaGTGCTGGCCGGTTGGTGAACGGAAAGCCAGTCCT +
Preference number: 3 (lower is better)
Translates to: EVREDPPQGGTV*CWPVGERKASP
Trigger: AGGACTGGCTTTCCGTTCACCAACCGGCCAGCAGCAGACAGTGCCTCCTTGTGGCGGATCTTCCCGGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR TCA 72 bp CACAGAAACGTGTGTTGGAGGGAAGGAGGCGGGAGATaGGGTGGGTTCACTCCCCCTACCCAGAGGGACCAG +
Preference number: 3 (lower is better)
Translates to: HRNVCWREGGGR*GGFTPPTQRDQ
Trigger: CTGGTCCCTCTGGGTAGGGGGAGTGAACCCACCTCATCTCCCGCCTCCTTCCCTCCAACACACGTTTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
3UTR TCA 72 bp AGGCCCGCTGCTCTTAGTAGGTGCTCTGGTGGCCCGTaGGGATGTAGAGGTTGCTGTGCGCCTCTGGGTTGT +
Preference number: 3 (lower is better)
Translates to: RPAALSRCSGGP*GCRGCCAPLGC
Trigger: ACAACCCAGAGGCGCACAGCAACCTCTACATCCTCACGGGCCACCAGAGCACCTACTAAGAGCAGCGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
3UTR CCA 72 bp ACCGACCCCAATTTGGAAGGTGCCCCTCACCCTCCTTaGGGCTCACGGGAACATGGGTGTGAATGCCTGGTG +
Preference number: 3 (lower is better)
Translates to: TDPNLEGAPHPP*GSREHGCECLV
Trigger: CACCAGGCATTCACACCCATGTTCCCGTGAGCCCCAAGGAGGGTGAGGGGCACCTTCCAAATTGGGGTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 72 bp TCCTCTCGGCTGGGCCGTGCTGCCCCCGGGAGTGAATaGTGTCTGGAAACATGTCATAGGTCTCCAGCTCAC +
Preference number: 3 (lower is better)
Translates to: SSRLGRAAPGSE*CLETCHRSPAH
Trigger: GTGAGCTGGAGACCTATGACATGTTTCCAGACACCATTCACTCCCGGGGGCAGCACGGCCCAGCCGAGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CAA 90 bp ATTGTGTCCCTGTCCACCTGGATCACCTGCTGGGCCGAGCCTGGGATCCCCTCACAGCCATTGAAGACCTaGGAGAAGCAGGCGCCCATA +
Preference number: 3 (lower is better)
Translates to: IVSLSTWITCWAEPGIPSQPLKT*EKQAPI
Trigger: TATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTG...TGAGGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGACAGGGACACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR GCA 72 bp GCGAGCTGGGGTGGCTCACCCAGTCCAAGGGCAGATTaGAGGGACTCCTCTTCACCACATCTTGTCCATTCC +
Preference number: 3 (lower is better)
Translates to: ASWGGSPSPRAD*RDSSSPHLVHS
Trigger: GGAATGGACAAGATGTGGTGAAGAGGAGTCCCTGCAATCTGCCCTTGGACTGGGTGAGCCACCCCAGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR GCA 72 bp GTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTaGATGTTGACAATCCTCACACAGCGTTCAAAGCTG +
Preference number: 3 (lower is better)
Translates to: VSSGASVAVGSP*MLTILTQRSKL
Trigger: CAGCTTTGAACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
3UTR GCA 72 bp CACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTaGCAGTGTGGCCGTGGGCTCGCCCTGCATGTTGAC +
Preference number: 3 (lower is better)
Translates to: HSLDGEIKGQLR*QCGRGLALHVD
Trigger: GTCAACATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
3UTR CCA 72 bp GTGAATGCCTGGTGTGAAGAGATGTGTTCCCTCCCCTaGGCTGGCTCCCCATTCCAGCCAAGAAACCCTCCC +
Preference number: 3 (lower is better)
Translates to: VNAWCEEMCSLP*AGSPFQPRNPP
Trigger: GGGAGGGTTTCTTGGCTGGAATGGGGAGCCAGCCCAGGGGAGGGAACACATCTCTTCACACCAGGCATTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 72 bp GACCCTCCCACAGGTTTCTGCCCATGGAGGGGCAACTaGACAGCAGCTATCACCACGGCATATGTAGCCACC +
Preference number: 3 (lower is better)
Translates to: DPPTGFCPWRGN*TAAITTAYVAT
Trigger: GGTGGCTACATATGCCGTGGTGATAGCTGCTGTCCAGTTGCCCCTCCATGGGCAGAAACCTGTGGGAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 72 bp GACCGAATAGTCAGACTCCTTTCCTCCAGGGCCTCCTaGACCGACTGCAGCAGGCTCCCACTCAACTCTTCC +
Preference number: 3 (lower is better)
Translates to: DRIVRLLSSRAS*TDCSRLPLNSS
Trigger: GGAAGAGTTGAGTGGGAGCCTGCTGCAGTCGGTCCAGGAGGCCCTGGAGGAAAGGAGTCTGACTATTCGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CAA 90 bp CCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTTGACTTTCACCAGGATCTTTGGTCAGGGCCTTaGCTGAGCAGGAGCTCACCT +
Preference number: 3 (lower is better)
Translates to: PPPSRSTHHGAPLDFHQDLWSGP*LSRSSP
Trigger: AGGTGAGCTCCTGCTCAGCAAAGGCCCTGACCAAAG...ATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CAA 90 bp CACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAGGCCAGATCCAGGCTTCGGCCTaGCATCCCATGGCTCCAGAA +
Preference number: 3 (lower is better)
Translates to: HLIGIQASALHPMAPEGQIQASA*HPMAPE
Trigger: TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGAT...CTGGCCTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CAA 90 bp GGGGAAATCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATGTCTTATCTCTCAGTTaGGGCGGCTGGAAGCTCATG +
Preference number: 3 (lower is better)
Translates to: GEIKGQLRCQCGRGLALHVLSLS*GGWKLM
Trigger: CATGAGCTTCCAGCCGCCCAAACTGAGAGATAAGAC...ATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433890.5
3UTR-3UTR CAA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTCTAGGATGGGCCCCTTaGCCCAAAAGGGCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPLGWAP*PKRACS
Trigger: GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAG...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR CAA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGCTAGGATGGGCCCCTTaGCCCAAAAGGGCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: RPETFLRITSDLQPQQGQLGWAP*PKRACS
Trigger: GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAG...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR CAA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGCCCCTGGTCCAGTTATaGCAGAGGCGTCGGGGGCTC +
Preference number: 3 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWPLVQL*QRRRGL
Trigger: GAGCCCCCGACGCCTCTGCAATAACTGGACCAGGGG...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
3UTR-3UTR CAA 90 bp CAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCTGGTGAAACTGCCACAGAAACGTGTGTaGGAGGGAAGGAGGCGGGAG +
Preference number: 3 (lower is better)
Translates to: QWVSFLPAWGAKFHLVKLPQKRV*EGRRRE
Trigger: CTCCCGCCTCCTTCCCTCCAACACACGTTTCTGTGG...CAGTTTCACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435926.5
3UTR-3UTR CAA 90 bp CCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACTCCTGGGTCACCTCATaGGTATCCAGGCTTCGGCCT +
Preference number: 3 (lower is better)
Translates to: PRLIQWVSFLPAWGAKFHSWVTS*VSRLRP
Trigger: AGGCCGAAGCCTGGATACCAATGAGGTGACCCAGGA...GTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CAA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGCTGTGCGCCTCTGGGTaGTCAGTGGGAATGCTCTCC +
Preference number: 3 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLLCASG*SVGMLS
Trigger: GGAGAGCATTCCCACTGACAACCCAGAGGCGCACAG...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
3UTR GCA 72 bp CTGCTGAGTCGTGAACGGGTGCTGCAGGAGCTTCTCTaGTGTCGGCCTCTTCTTAGGATTCTTGGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: LLSRERVLQELL*CRPLLRILGQG
Trigger: GCCCTGACCAAGAATCCTAAGAAGAGGCCGACAGCAGAGAAGCTCCTGCAGCACCCGTTCACGACTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR CCA 72 bp TGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTaGAAGCTGCTCTTCGACATGAGCATCAGGGCCCTC +
Preference number: 3 (lower is better)
Translates to: WVQRVLSLSLGG*KLLFDMSIRAL
Trigger: GAGGGCCCTGATGCTCATGTCGAAGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435926.5
3UTR-3UTR CAA 90 bp CCTTGGGAGTCTGGTAGACGGACACAGGCTAGCCTTCCCATCCAATCTGATGATCCACAGAAACGTGTGTaGGAGGGAAGGAGGCGGGAG +
Preference number: 3 (lower is better)
Translates to: PWESGRRTQASLPIQSDDPQKRV*EGRRRE
Trigger: CTCCCGCCTCCTTCCCTCCAACACACGTTTCTGTGG...ATCATCAGATTGGATGGGAAGGCTAGCCTGTGTCCGTCTACCAGACTCCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CAA 90 bp GAACGGGTGCTGCAGGAGCTTCTCTGCTGTCGGCCTCTTCTTAGGATTCTTGGTGGCTCGCCCTGCATGTaGACAATCCTCACACAGCGT +
Preference number: 3 (lower is better)
Translates to: ERVLQELLCCRPLLRILGGSPCM*TILTQR
Trigger: ACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCC...ACCAAGAATCCTAAGAAGAGGCCGACAGCAGAGAAGCTCCTGCAGCACCCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR TCA 72 bp AGAGTCAGAACAGTTGAAACTCTGCTGGAGGGTGGCTaGGGGGACAGTGTGACACCCTGGGAACCACTGAGC +
Preference number: 3 (lower is better)
Translates to: RVRTVETLLEGG*GDSVTPWEPLS
Trigger: GCTCAGTGGTTCCCAGGGTGTCACACTGTCCCCTCAGCCACCCTCCAGCAGAGTTTCAACTGTTCTGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR GCA 72 bp CCTCCCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTaGGTGGGGCGCCAAATTTCACCTGGTGAAACTGGA +
Preference number: 3 (lower is better)
Translates to: PPTAHSVGQFPS*VGRQISPGETG
Trigger: TCCAGTTTCACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR GCA 72 bp AGAGGGCTGGAGAAGTTCTTCAGCAGCAGAAACTTCTaGAGCGGCTCATACCACTGCAGCAGGAGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RGLEKFFSSRNF*SGSYHCSRSRL
Trigger: CAGCCTGCTCCTGCTGCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCTGAAGAACTTCTCCAGCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR CCA 72 bp GCTCTTGGCCTGCCTTTGCTGGCAGCAAGCGTTTTATaGGAGGCCCCCACTTTGGCAGTTTACACTCTGCAG +
Preference number: 3 (lower is better)
Translates to: ALGLPLLAASVL*EAPTLAVYTLQ
Trigger: CTGCAGAGTGTAAACTGCCAAAGTGGGGGCCTCCCATAAAACGCTTGCTGCCAGCAAAGGCAGGCCAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR-3UTR CAA 90 bp AATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGGAAGCTCATGGGGCTCGCCCTGCATGTaGACAATCCTCACACAGCGT +
Preference number: 3 (lower is better)
Translates to: NSGSSESYLSVWAAGSSWGSPCM*TILTQR
Trigger: ACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCC...CCATGAGCTTCCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433890.5
3UTR CCA 72 bp GTAAACCTAAGGAAAGTAAAGCTCAGCGAGCTGGGGTaGCTCACCCAGTCCAAGGGCAGATTGCAGGGACTC +
Preference number: 3 (lower is better)
Translates to: VNLRKVKLSELG*LTQSKGRLQGL
Trigger: GAGTCCCTGCAATCTGCCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAGCTTTACTTTCCTTAGGTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 72 bp GGAAATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTTaGGCGGCTGGAAGCTCATGGGGTGCAGGTGGAACA +
Preference number: 3 (lower is better)
Translates to: GNSGSSESYLSV*AAGSSWGAGGT
Trigger: TGTTCCACCTGCACCCCATGAGCTTCCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433890.5
3UTR CCA 72 bp CCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTaGGGCGCCAAATTTCACCTGGTGAAACTGGATCTC +
Preference number: 3 (lower is better)
Translates to: PRLIQWVSFLPA*GAKFHLVKLDL
Trigger: GAGATCCAGTTTCACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CAA 90 bp ATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCATCTGTGATCTCCGGCTCGCCCTGCATGTaGACAATCCTCACACAGCGT +
Preference number: 3 (lower is better)
Translates to: MSLWAPSTRKILVSSVISGSPCM*TILTQR
Trigger: ACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCC...GGAGATCACAGATGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CAA 90 bp GAACGGGTGCTGCAGGAGCTTCTCTGCTGTCGGCCTCTTCTTAGGATTCTTGGTAGAGTGAGGAGAAGGTaGGCTCCCTTGATGTCTCTG +
Preference number: 3 (lower is better)
Translates to: ERVLQELLCCRPLLRILGRVRRR*APLMSL
Trigger: CAGAGACATCAAGGGAGCCAACCTTCTCCTCACTCT...ACCAAGAATCCTAAGAAGAGGCCGACAGCAGAGAAGCTCCTGCAGCACCCGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR-3UTR CAA 90 bp GTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGGAAGCTGCTCTTCGACATGCCAAAGTCAGCCAGTTaGACATCTCCCTGGAGAGTG +
Preference number: 3 (lower is better)
Translates to: VQRVLSLSLGGWKLLFDMPKSAS*TSPWRV
Trigger: CACTCTCCAGGGAGATGTCAAACTGGCTGACTTTGG...CATGTCGAAGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435926.5
3UTR TCA 72 bp GTGCTAAACTACAGCAGAGCCCTCAAACTGCAAAGCTaGGGGTCAGTTCTGAGCAAGGATGCAGGGGAAGGC +
Preference number: 3 (lower is better)
Translates to: VLNYSRALKLQS*GSVLSKDAGEG
Trigger: GCCTTCCCCTGCATCCTTGCTCAGAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGCTGTAGTTTAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
3UTR-3UTR CAA 90 bp AAGTTCTTCAGCAGCAGAAACTTCTGCAGCGGCTCATACCACTGCAGCAGGAGCAGAGTGAGGAGAAGGTaGGCTCCCTTGATGTCTCTG +
Preference number: 3 (lower is better)
Translates to: KFFSSRNFCSGSYHCSRSRVRRR*APLMSL
Trigger: CAGAGACATCAAGGGAGCCAACCTTCTCCTCACTCT...GCTCCTGCTGCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCTGAAGAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR CCA 72 bp GAGGCAAGAAGCAGGAGGGTGGGCTTACCAAGGGCATaGGAAACTTTCCAGAGTGAAGGGGATGGTGATTAT +
Preference number: 3 (lower is better)
Translates to: EARSRRVGLPRA*ETFQSEGDGDY
Trigger: ATAATCACCATCCCCTTCACTCTGGAAAGTTTCCCATGCCCTTGGTAAGCCCACCCTCCTGCTTCTTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR TCA 72 bp AGTGGCAATTCCAGAGTTCTGTGCAGGACGCTGCAGTaGTTCCGCCCCACTTGTTTTCACCATCTAGGGAAA +
Preference number: 3 (lower is better)
Translates to: SGNSRVLCRTLQ*FRPTCFHHLGK
Trigger: TTTCCCTAGATGGTGAAAACAAGTGGGGCGGAATCACTGCAGCGTCCTGCACAGAACTCTGGAATTGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR GCA 72 bp TCTCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTTaGTCTTGGCCTGCCTTTGCTGGCAGCAAGCGTTTT +
Preference number: 3 (lower is better)
Translates to: SQCIFPGFSAFL*SWPAFAGSKRF
Trigger: AAAACGCTTGCTGCCAGCAAAGGCAGGCCAAGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 72 bp TTCTTAGGATTCTTGGTCAGGGCCAGTTTGAGAAAGTaGTGGAAATTCTGGGTCCAGCGAGTCTTATCTCTC +
Preference number: 3 (lower is better)
Translates to: FLGFLVRASLRK*WKFWVQRVLSL
Trigger: GAGAGATAAGACTCGCTGGACCCAGAATTTCCACCACTTTCTCAAACTGGCCCTGACCAAGAATCCTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
3UTR GCA 72 bp TTAATGCATGCAACAGGGATGACTCGCAAATCCTTATaGTCAGCTAAGCAAGAAGCCAGACAAAACACAAGT +
Preference number: 3 (lower is better)
Translates to: LMHATGMTRKSL*SAKQEARQNTS
Trigger: ACTTGTGTTTTGTCTGGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 72 bp CCTGGTCCCAACATTCCTCCGAGAAATCTGGAAAATTaGAAGTTAGGAATTCACTTTGTATCCCTGTTACCA +
Preference number: 3 (lower is better)
Translates to: PGPNIPPRNLEN*KLGIHFVSLLP
Trigger: TGGTAACAGGGATACAAAGTGAATTCCTAACTTCCAATTTTCCAGATTTCTCGGAGGAATGTTGGGACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CCA 72 bp ATAGCAGCTTTATTTGTAATAGTTCACAACGGAACATaGTCCAAATGTCCATCAACAGGTGAACAGCTAACC +
Preference number: 3 (lower is better)
Translates to: IAALFVIVHNGT*SKCPSTGEQLT
Trigger: GGTTAGCTGTTCACCTGTTGATGGACATTTGGACCATGTTCCGTTGTGAACTATTACAAATAAAGCTGCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCCGGTCCCGCGGGTCCTaGAGCGACACATCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRARSRGS*SDTSRS
Trigger: GCTGCGGGATGTGTCGCTGCAGGACCCGCGGGACCG...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp GCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCGGTCCCGCGGGTCCTaGAGCGACACATCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: APSVPLGRRRQSAAPPGARSRGS*SDTSRS
Trigger: GCTGCGGGATGTGTCGCTGCAGGACCCGCGGGACCG...GGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR CCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCGCAGGAGCAGGCTGGTaGGCAGGGCGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGAGAGW*AGRPAG
Trigger: TCCTGCTGGCCGCCCTGCCCACCAGCCTGCTCCTGC...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCGCCCGAGGGAGCTGCTaGGTCGTGAACGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGARGSC*VVNGCC
Trigger: GCAGCACCCGTTCACGACTCAGCAGCTCCCTCGGGC...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp CCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGGGAGCCCCCTCCGCAGACGGTCCCGCGGGTCCTaGAGCGACACATCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PPGAQWHGKSPAGSPLRRRSRGS*SDTSRS
Trigger: GCTGCGGGATGTGTCGCTGCAGGACCCGCGGGACCG...TCTGCGGAGGGGGCTCCCTGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR CCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCCCGCTGCTTCATGGTaGCCCAGGCCGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGPAASW*PRPWAA
Trigger: TGCTGCCCACGGCCTGGGCCACCATGAAGCAGCGGG...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCGCAGGAGCAGGCTGGTaGGCAGGGCGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSAGAGW*AGRPAG
Trigger: TCCTGCTGGCCGCCCTGCCCACCAGCCTGCTCCTGC...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGCAGGAGCAGGCTGGTaGGCAGGGCGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VPLGRRRQSAAPPGAQWHAGAGW*AGRPAG
Trigger: TCCTGCTGGCCGCCCTGCCCACCAGCCTGCTCCTGC...ATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGGGCCGTGGGCAGCAGTaGGGAGCTGTTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLGRGQQ*GAVGAW
Trigger: CCAGGCCCCAACAGCTCCCCACTGCTGCCCACGGCC...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377350.7
CDS-3UTR TCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCCGGCCAGTTCGGACGTaGCCGTGTCGCGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACRPVRT*PCRGPC
Trigger: ACAAGGCCCGCGACACGGTCACGTCCGAACTGGCCG...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATCGGCCAGTTCGGACGTaGCCGTGTCGCGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VPLGRRRQSAAPPGAQWHRPVRT*PCRGPC
Trigger: ACAAGGCCCGCGACACGGTCACGTCCGAACTGGCCG...ATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR TCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTCCCCTCAGGTGGGATaGGGATGTCGGGCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRASPQVG*GCRASG
Trigger: GCCTGACGCCCGACATCCTCATCCCACCTGAGGGGA...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp CTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTACGGTCCCGCGGGTCCTaGAGCGACACATCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LSADVGNLPLLQGPSGMVRSRGS*SDTSRS
Trigger: GCTGCGGGATGTGTCGCTGCAGGACCCGCGGGACCG...TACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR CCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCGCAGTGGGGAGCTGTTaGGGCCTGAAGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRAAVGSC*GLKEVG
Trigger: CCCCACCTCCTTCAGGCCCCAACAGCTCCCCACTGC...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCCGGCCAGCAGGAAGGTaGCACCCGTGTAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRARPAGR*HPCRGS
Trigger: GGAACCCCTACACGGGTGCCACCTTCCTGCTGGCCG...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCTCCAGGGGCAGGACATaGAACAGGACGCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGSRGRT*NRTRQP
Trigger: CGGCTGCCGCGTCCTGTTCCATGTCCTGCCCCTGGA...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCGCTCAGGTGCCAGTGTaGCCGTGGGCTCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACAQVPV*PWARPA
Trigger: TGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGC...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR TCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCCTGCTGGAGGGTGGCTaGGGGGACAGTGTGACACCC +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACLLEGG*GDSVTP
Trigger: GGGTGTCACACTGTCCCCTCAGCCACCCTCCAGCAG...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GCCATGCCCTCAAGATGCAGGCTCCAGCAAGGAGGACGCCCTCCCTGGGGGCTGTCAGGATCCTCCCGCTaGTTCATGGTGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AMPSRCRLQQGGRPPWGLSGSSR*FMVAQA
Trigger: GGCCTGGGCCACCATGAAGCAGCGGGAGGATCCTGA...CAGCCCCCAGGGAGGGCGTCCTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GCCATGCCCTCAAGATGCAGGCTCCAGCAAGGAGGACGCCCTCCCTGGGGGCTGGCCCCAACACACACCTaGGGCAGCTCCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: AMPSRCRLQQGGRPPWGLAPTHT*GSSFPS
Trigger: GGATGGGAAGGAGCTGCCGCAGGTGTGTGTTGGGGC...CAGCCCCCAGGGAGGGCGTCCTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCCCTGGTCCAGTTATTaGAGAGGCGTCGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGPWSSY*RGVGGS
Trigger: GGAGCCCCCGACGCCTCTGCAATAACTGGACCAGGG...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCCTGCTGGAGGGTCAGTaGGGAGTGGCCCTAGGAACG +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRALLEGQ*GVALGT
Trigger: CGTTCCTAGGGCCACTCCCCACTGACCCTCCAGCAG...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCCTGGGGATGATGCGCTaGGTGAGGCGGTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSLGMMR*VRRLVG
Trigger: CCCCACCAACCGCCTCACCCAGCGCATCATCCCCAG...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCTTGGGCACTAGGGACTaGGCTGCCTCGGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACLGTRD*AASGMG
Trigger: CCCCATCCCCGAGGCAGCCCAGTCCCTAGTGCCCAA...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR TCA 90 bp ATTGTGTCCCTGTCCACCTGGATCACCTGCTGGGCCGAGCCTGGGATCCCCTCAGCCCGAGGGAGCTGCTaGGTCGTGAACGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: IVSLSTWITCWAEPGIPSARGSC*VVNGCC
Trigger: GCAGCACCCGTTCACGACTCAGCAGCTCCCTCGGGC...TGAGGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGACAGGGACACAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGGGTCAGGGCCTTTGCTaGGCAGGAGCTCACCTCCCT +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLGQGLC*AGAHLP
Trigger: AGGGAGGTGAGCTCCTGCTCAGCAAAGGCCCTGACC...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCCTGCTGGCCGGTTGGTaGACGGAAAGCCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSLLAGW*TESQSS
Trigger: GGAGGACTGGCTTTCCGTTCACCAACCGGCCAGCAG...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GCCATGCCCTCAAGATGCAGGCTCCAGCAAGGAGGACGCCCTCCCTGGGGGCTGTGGAACAGAGGGGGCTaGAGCTCGCCCAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: AMPSRCRLQQGGRPPWGLWNRGG*SSPSSM
Trigger: CATTGAGCTGGGCGAGCTGCAGCCCCCTCTGTTCCA...CAGCCCCCAGGGAGGGCGTCCTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCTGGAACAGAGGGGGCTaGAGCTCGCCCAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGWNRGG*SSPSSM
Trigger: CATTGAGCTGGGCGAGCTGCAGCCCCCTCTGTTCCA...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCGCCTCCTGGACCGACTaGAGCAGGCTCCCACTCAAC +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSASWTD*SRLPLN
Trigger: GTTGAGTGGGAGCCTGCTGCAGTCGGTCCAGGAGGC...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGGGACAGAGGCTCCTCTaGTGGAGGGTCAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLGQRLL*WRVSGE
Trigger: CTCCCCACTGACCCTCCAGCAGAGGAGCCTCTGTCC...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCTCAGGATCCTCCCGCTaGTTCATGGTGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSSGSSR*FMVAQA
Trigger: GGCCTGGGCCACCATGAAGCAGCGGGAGGATCCTGA...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCCCTGGTCCAGTTATTaGAGAGGCGTCGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLPWSSY*RGVGGS
Trigger: GGAGCCCCCGACGCCTCTGCAATAACTGGACCAGGG...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGGGAGCCCCCTCCGCAGAACTTCCTCCAGGGCCTCCTaGACCGACTGCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PGAQWHGKSPAGSPLRRTSSRAS*TDCSRL
Trigger: GAGCCTGCTGCAGTCGGTCCAGGAGGCCCTGGAGGA...AGTTCTGCGGAGGGGGCTCCCTGCAGGAGATTTACCATGCCACTGGGCCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGTCCTCCAGGGCCTCCTaGACCGACTGCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VEPLQCLSADVGNLPLLQSSRAS*TDCSRL
Trigger: GAGCCTGCTGCAGTCGGTCCAGGAGGCCCTGGAGGA...CTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCCTGCTGGAGGGTCAGTaGGGAGTGGCCCTAGGAACG +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSLLEGQ*GVALGT
Trigger: CGTTCCTAGGGCCACTCCCCACTGACCCTCCAGCAG...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp TGGGTGAGGCGGTTGGTGGGGATGGAGAGGGGAACCTGTTGCTGTAGCCTCCGCTGGGGGCAGGGTTCCTaGGGGACTGGACAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WVRRLVGMERGTCCCSLRWGQGS*GTGQRL
Trigger: GAGCCTCTGTCCAGTCCCCCAGGAACCCTGCCCCCA...GCGGAGGCTACAGCAACAGGTTCCCCTCTCCATCCCCACCAACCGCCTCACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TGGGTGAGGCGGTTGGTGGGGATGGAGAGGGGAACCTGTTGCTGTAGCCTCCGCCAGGTGACAGCAGCGTaGATCCGCAGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WVRRLVGMERGTCCCSLRQVTAA*IRRGQP
Trigger: TGGCTGCCCCCTGCGGATCCACGCTGCTGTCACCTG...GCGGAGGCTACAGCAACAGGTTCCCCTCTCCATCCCCACCAACCGCCTCACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCCTAGGAACGGGGCCCGCTTGATGGTTCCCATGGTATCGTCTGGGGAGTCCCTGGGGATGATGCGCTaGGTGAGGCGGTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GPRNGARLMVPMVSSGESLGMMR*VRRLVG
Trigger: CCCCACCAACCGCCTCACCCAGCGCATCATCCCCAG...GGACTCCCCAGACGATACCATGGGAACCATCAAGCGGGCCCCGTTCCTAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GCCATGCCCTCAAGATGCAGGCTCCAGCAAGGAGGACGCCCTCCCTGGGGGCTGTGGGATCCCCTCAGGTaGGATGAGGATGTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: AMPSRCRLQQGGRPPWGLWDPLR*DEDVGR
Trigger: ACGCCCGACATCCTCATCCCACCTGAGGGGATCCCA...CAGCCCCCAGGGAGGGCGTCCTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGGCTCAGGTGCCAGTGTaGCCGTGGGCTCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLAQVPV*PWARPA
Trigger: TGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGC...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp TCAGTGGGGAGTGGCCCTAGGAACGGGGCCCGCTTGATGGTTCCCATGGTATCGGCTCAGGTGCCAGTGTaGCCGTGGGCTCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SVGSGPRNGARLMVPMVSAQVPV*PWARPA
Trigger: TGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGC...CGATACCATGGGAACCATCAAGCGGGCCCCGTTCCTAGGGCCACTCCCCACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGTCCCCAGGGCGCCTTTaGTCAGGGCCTTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLSPGRL*SGPLLS
Trigger: GCTCAGCAAAGGCCCTGACCAAAGGCGCCCTGGGGA...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GGGAAATCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATGCTGCTGGGCCGAGCATaGAACAGGACGCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GKSKVSSGASVAVGSPCMLLGRA*NRTRQP
Trigger: CGGCTGCCGCGTCCTGTTCCATGCTCGGCCCAGCAG...CATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424945.5
CDS-3UTR TCA 90 bp CGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGCACGGCCAGTTCGGACGTaGCCGTGTCGCGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: RRQSAAPPGAQWHGKSPARPVRT*PCRGPC
Trigger: ACAAGGCCCGCGACACGGTCACGTCCGAACTGGCCG...TGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR TCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCCCCCTGGGTCTAGCTTaGCTATCTTCACGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACPLGLA*LSSRRP
Trigger: TGGCCGCCGTGAAGATAGTCAAGCTAGACCCAGGGG...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000377350.7
CDS-3UTR TCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCCTGTGGATCTTCCCCTaGGAATGCAGGTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRALWIFP*ECRWWS
Trigger: GCTCCACCACCTGCATTCTCAGGGGAAGATCCACAG...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGCGCTGTCAGCTCGCCTaGCACCCCAAAGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGRCQLA*HPKVSQ
Trigger: CTGGCTGACTTTGGGGTGTCAGGCGAGCTGACAGCG...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GGCCATGGCCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCGCTGTCAGCTCGCCTaGCACCCCAAAGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GHGLLSPLPGFSKTLGALRCQLA*HPKVSQ
Trigger: CTGGCTGACTTTGGGGTGTCAGGCGAGCTGACAGCG...CAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGGCCATGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCTGCCCCCGGGAGTaGATGGTGTCTGGAAACATG +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRACCPRE*MVSGNM
Trigger: CATGTTTCCAGACACCATTCACTCCCGGGGGCAGCA...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp TCAGTGGGGAGTGGCCCTAGGAACGGGGCCCGCTTGATGGTTCCCATGGTATCGTCCCCTCAGGTGGGATaGGGATGTCGGGCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SVGSGPRNGARLMVPMVSSPQVG*GCRASG
Trigger: GCCTGACGCCCGACATCCTCATCCCACCTGAGGGGA...CGATACCATGGGAACCATCAAGCGGGCCCCGTTCCTAGGGCCACTCCCCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGTCCCCTCAGGTGGGATaGGGATGTCGGGCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLSPQVG*GCRASG
Trigger: GCCTGACGCCCGACATCCTCATCCCACCTGAGGGGA...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCTCTGGTGGCCCGTaGGGATGTAGAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRACSGGP*GCRGCC
Trigger: ACAGCAACCTCTACATCCTCACGGGCCACCAGAGCA...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GCACAAGCTACAGGAGAATGGCCATGCCCTCAAGATGCAGGCTCCAGCAAGGAGCCGGCCCCCACGCGCTaGAGCAGCTCGAAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: AQATGEWPCPQDAGSSKEPAPTR*SSSKRS
Trigger: GGACCGCTTCGAGCTGCTGCAGCGCGTGGGGGCCGG...CTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGCCATTCTCCTGTAGCTTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp CCACAAGCGGTCATTCCTGAGGTAGCTGCCAATGTAGGCCACCACATTGGGGTGCCGGCCCCCACGCGCTaGAGCAGCTCGAAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PQAVIPEVAANVGHHIGVPAPTR*SSSKRS
Trigger: GGACCGCTTCGAGCTGCTGCAGCGCGTGGGGGCCGG...CACCCCAATGTGGTGGCCTACATTGGCAGCTACCTCAGGAATGACCGCTTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR GCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGGTGGAGCCCCTTCAGTaGCTCTCGGCAGACGTAGGC +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGVEPLQ*LSADVG
Trigger: GCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCAC...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCTGGAACAGAGGGGGCTaGAGCTCGCCCAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACWNRGG*SSPSSM
Trigger: CATTGAGCTGGGCGAGCTGCAGCCCCCTCTGTTCCA...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGGCCTCCTGGACCGACTaGAGCAGGCTCCCACTCAAC +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGASWTD*SRLPLN
Trigger: GTTGAGTGGGAGCCTGCTGCAGTCGGTCCAGGAGGC...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCTGCTGTAGCCTCCGCTaGTCAAACAGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSCCSLR*SNRPGR
Trigger: CCTCCCAGGCCTGTTTGAGCAGCGGAGGCTACAGCA...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GAGGGCCCGAGGGAGCTGCTGAGTCGTGAACGGGTGCTGCAGGAGCTTCTCTGCAGCGGCTCATACCACTaGAGCAGGAGCAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EGPRELLSRERVLQELLCSGSYH*SRSRLV
Trigger: CACCAGCCTGCTCCTGCTGCAGTGGTATGAGCCGCT...GCAGAGAAGCTCCTGCAGCACCCGTTCACGACTCAGCAGCTCCCTCGGGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGGCCCCAACACACACCTaGGGCAGCTCCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGAPTHT*GSSFPS
Trigger: GGATGGGAAGGAGCTGCCGCAGGTGTGTGTTGGGGC...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp CCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGGGAGCCCCCTCCGCAGAACTTCCACCTGGATCACCTaGTGGGCCGAGCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: PGAQWHGKSPAGSPLRRTSTWIT*WAEPGI
Trigger: GATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGA...AGTTCTGCGGAGGGGGCTCCCTGCAGGAGATTTACCATGCCACTGGGCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp TCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGGCCAGCACACTGTCCTaGAGGCACACCACAGTCTCG +
Preference number: 4 (lower is better)
Translates to: SVPLGRRRQSAAPPGAQWASTLS*RHTTVS
Trigger: CGAGACTGTGGTGTGCCTGCAGGACAGTGTGCTGGC...CCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp CTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGCAGATTGCAGGGACTCCTCAAACCCTGGGGGCCCTaGCCTTCTGTGGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: LSELGWLTQSKGRLQGLLKPWGP*PSVVPT
Trigger: TGTGGGCACCACAGAAGGGCAGGGCCCCCAGGGTTT...GAGGAGTCCCTGCAATCTGCCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp AGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGGGGTGCCCCTAGAAGGCTaGTGGGGGCCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RQSAAPPGAQWHGKSPAGVPLEG*WGPWPP
Trigger: AGGAGGCCATGGCCCCCAGCAGCCTTCTAGGGGCAC...CCCTGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR GCA 90 bp CTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGCAGATTGCAGGGACTCCTCGGAGGCACTGTCTGCTaGTGGCCGGTTGGTGAACGG +
Preference number: 4 (lower is better)
Translates to: LSELGWLTQSKGRLQGLLGGTVC*WPVGER
Trigger: CCGTTCACCAACCGGCCAGCAGCAGACAGTGCCTCC...GAGGAGTCCCTGCAATCTGCCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GGCCATGGCCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGGCCACCACATTGGGGTaGCGGCACTCACGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GHGLLSPLPGFSKTLGALATTLG*RHSRRM
Trigger: CATCCTGCGTGAGTGCCGCCACCCCAATGTGGTGGC...CAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGGCCATGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCGGGGAGTCCAGCTCCTaGAATTCTGAGGCTGACCGA +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGGESSS*NSEADR
Trigger: TCGGTCAGCCTCAGAATTCCAGGAGCTGGACTCCCC...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGCAGAGGCTCCTCTGCTaGAGGGTCAGTGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGQRLLC*RVSGEW
Trigger: CCACTCCCCACTGACCCTCCAGCAGAGGAGCCTCTG...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp TCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATGTTGACAATCCTCACACAGCCCGCTGCTTCATGGTaGCCCAGGCCGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SGASVAVGSPCMLTILTQPAASW*PRPWAA
Trigger: TGCTGCCCACGGCCTGGGCCACCATGAAGCAGCGGG...CTGTGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGCCACACTGGCACCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGGGCTGGGGATGATGCGCTaGGTGAGGCGGTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RQSAAPPGAQWHGKSPAGLGMMR*VRRLVG
Trigger: CCCCACCAACCGCCTCACCCAGCGCATCATCCCCAG...CCCTGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCGGCTGGGCAGAGGGCTaGAGAAGTTCTTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRAGWAEG*RSSSAA
Trigger: TGCTGCTGAAGAACTTCTCCAGCCCTCTGCCCAGCC...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGGGAACCTGGATCACCTGCTaGGCCGAGCCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: GNLPLLQGPSGMVNLLQGTWITC*AEPGIP
Trigger: GGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGT...TCCCTGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCGCTTCTCCAAAACCCTaGGGGCCCTGCCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACASPKP*GPCPSV
Trigger: CACAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGC...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp ATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGCCCCTAGAAGGCTGCTaGGGGCCATGGCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: MQVVEPLQCLSADVGNLPPLEGC*GPWPPV
Trigger: GACAGGAGGCCATGGCCCCCAGCAGCCTTCTAGGGG...CGGCAGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCCCACCGACCCCAATTTaGAAGGTGCCCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACPPTPI*KVPLTL
Trigger: GAGGGTGAGGGGCACCTTCCAAATTGGGGTCGGTGG...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 72 bp AGCCAGTCCTCCCCAGGGCGCCTTTGGTCAGGGCCTTaGCTGAGCAGGAGCTCACCTCCCTGTCCCCACTTA +
Preference number: 4 (lower is better)
Translates to: SQSSPGRLWSGP*LSRSSPPCPHL
Trigger: TAAGTGGGGACAGGGAGGTGAGCTCCTGCTCAGCAAAGGCCCTGACCAAAGGCGCCCTGGGGAGGACTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCCTGTGGATCTTCCCCTaGGAATGCAGGTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACLWIFP*ECRWWS
Trigger: GCTCCACCACCTGCATTCTCAGGGGAAGATCCACAG...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp TCAGTGGGGAGTGGCCCTAGGAACGGGGCCCGCTTGATGGTTCCCATGGTATCGCGCTGTCAGCTCGCCTaGCACCCCAAAGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SVGSGPRNGARLMVPMVSRCQLA*HPKVSQ
Trigger: CTGGCTGACTTTGGGGTGTCAGGCGAGCTGACAGCG...CGATACCATGGGAACCATCAAGCGGGCCCCGTTCCTAGGGCCACTCCCCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp TGGGTGAGGCGGTTGGTGGGGATGGAGAGGGGAACCTGTTGCTGTAGCCTCCGCCAGGGTGAATCCAGGTaGCAGCAGCGTGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: WVRRLVGMERGTCCCSLRQGESR*QQRGSA
Trigger: TGCGGATCCACGCTGCTGTCACCTGGATTCACCCTG...GCGGAGGCTACAGCAACAGGTTCCCCTCTCCATCCCCACCAACCGCCTCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCTCCCGAGTAACAGGGTaGATCCAGGTGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSSRVTG*IQVTAA
Trigger: CGCTGCTGTCACCTGGATTCACCCTGTTACTCGGGA...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCGCTCGCCCTGCATGTTaGCAATCCTCACACAGCGTT +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGARPAC*QSSHSV
Trigger: AACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGC...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCGCTCGCCCTGCATGTTaGCAATCCTCACACAGCGTT +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRAARPAC*QSSHSV
Trigger: AACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGC...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR TCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCCCAGTCAAGAGCGGCTaGTCAGTGCCTGGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACPVKSG*SVPGAK
Trigger: TTTTGCCCCAGGCACTGATCAGCCGCTCTTGACTGG...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGCACCCTGGGAACCACTaGGCCTACTCGCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLHPGNH*AYSHGC
Trigger: GCAGCCATGCGAGTAGGCTCAGTGGTTCCCAGGGTG...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp TCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCTGCTGGGTCTAGCTTaGCTATCTTCACGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SVPLGRRRQSAAPPGAQWLLGLA*LSSRRP
Trigger: TGGCCGCCGTGAAGATAGTCAAGCTAGACCCAGCAG...CCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444560.1
CDS-3UTR GCA 90 bp TGTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGCCGGCCCCCACGCGCTaGAGCAGCTCGAAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: CPAGTPQSRWGNQRSAQVPAPTR*SSSKRS
Trigger: GGACCGCTTCGAGCTGCTGCAGCGCGTGGGGGCCGG...CACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGGTGGAGCCCCTTCAGTaGCTCTCGGCAGACGTAGGC +
Preference number: 4 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLVEPLQ*LSADVG
Trigger: GCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCAC...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR GCA 90 bp ATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGGTGGAGCCCCTTCAGTaGCTCTCGGCAGACGTAGGC +
Preference number: 4 (lower is better)
Translates to: MQVVEPLQCLSADVGNLPVEPLQ*LSADVG
Trigger: GCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCAC...CGGCAGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR GCA 90 bp TGGGTGAGGCGGTTGGTGGGGATGGAGAGGGGAACCTGTTGCTGTAGCCTCCGCTGCTGTAGCCTCCGCTaGTCAAACAGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: WVRRLVGMERGTCCCSLRCCSLR*SNRPGR
Trigger: CCTCCCAGGCCTGTTTGAGCAGCGGAGGCTACAGCA...GCGGAGGCTACAGCAACAGGTTCCCCTCTCCATCCCCACCAACCGCCTCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGAGCGGCTCATACCACTaGAGCAGGAGCAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGSGSYH*SRSRLV
Trigger: CACCAGCCTGCTCCTGCTGCAGTGGTATGAGCCGCT...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCATGGCCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGGCCAGCACACTGTCCTaGAGGCACACCACAGTCTCG +
Preference number: 4 (lower is better)
Translates to: GHGLLSPLPGFSKTLGALASTLS*RHTTVS
Trigger: CGAGACTGTGGTGTGCCTGCAGGACAGTGTGCTGGC...CAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGGCCATGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCTCCAGGCTTCGGCCTTaGATCCCATGGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSSRLRP*IPWLQK
Trigger: CTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGA...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCACAGGAGAATGGCCATaGCCTCAAGATGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGTGEWP*PQDAGS
Trigger: GGAGCCTGCATCTTGAGGGCATGGCCATTCTCCTGT...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGTCCACCTGGATCACCTaGTGGGCCGAGCATGGAACA +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLSTWIT*WAEHGT
Trigger: TGTTCCATGCTCGGCCCAGCAGGTGATCCAGGTGGA...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424945.5
CDS-3UTR CCA 90 bp CTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGCAGATTGCAGGGACTCCTCTGTAGGCCACCACATTaGGGTGGCGGCACTCACGCA +
Preference number: 4 (lower is better)
Translates to: LSELGWLTQSKGRLQGLLCRPPH*GGGTHA
Trigger: TGCGTGAGTGCCGCCACCCCAATGTGGTGGCCTACA...GAGGAGTCCCTGCAATCTGCCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGTGTAGGCCACCACATTaGGGTGGCGGCACTCACGCA +
Preference number: 4 (lower is better)
Translates to: VEPLQCLSADVGNLPLLQCRPPH*GGGTHA
Trigger: TGCGTGAGTGCCGCCACCCCAATGTGGTGGCCTACA...CTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR CCA 90 bp GACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGTGGGGGCAGGGTTCCTaGGGGACTGGACAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: DVGNLPLLQGPSGMVNLLWGQGS*GTGQRL
Trigger: GAGCCTCTGTCCAGTCCCCCAGGAACCCTGCCCCCA...CAGGAGATTTACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCTGCTCAAACAGGCCTaGGAGGTCATGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLLLKQA*EVMGPD
Trigger: ATCTGGGCCCATGACCTCCCAGGCCTGTTTGAGCAG...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATGTTGACACGGCCAGCAGGAAGGTaGCACCCGTGTAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SKVSSGASVAVGSPCMLTRPAGR*HPCRGS
Trigger: GGAACCCCTACACGGGTGCCACCTTCCTGCTGGCCG...TGTCAACATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGCGCAGGAGCAGGCTGGTaGGCAGGGCGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VLQAHHSLDGEIKGQLRCAGAGW*AGRPAG
Trigger: TCCTGCTGGCCGCCCTGCCCACCAGCCTGCTCCTGC...GCACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GCAGCCATTGAAGACCTTGGAGAAGCAGGCGCCCATATGCACCTTGGGAGTTGGGCAGGAGCAGGCTGGTaGGCAGGGCGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AAIEDLGEAGAHMHLGSWAGAGW*AGRPAG
Trigger: TCCTGCTGGCCGCCCTGCCCACCAGCCTGCTCCTGC...CCAACTCCCAAGGTGCATATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GCCAGTGTGGCCGTGGGCTCGCCCTGCATGTTGACAATCCTCACACAGCGTTCATCCAGGGGCAGGACATaGAACAGGACGCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: ASVAVGSPCMLTILTQRSSRGRT*NRTRQP
Trigger: CGGCTGCCGCGTCCTGTTCCATGTCCTGCCCCTGGA...TGAACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGCCACACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGCGGCCTTGCATCCCATaGCTCCAGAAGGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGRPCIP*LQKAST
Trigger: TGTGCTGGCCTTCTGGAGCCATGGGATGCAAGGCCG...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCTCCTCTGGTCTAGGATaGGCCCCTTTGCCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGSSGLG*APLPKR
Trigger: CCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGA...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TGTGGATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCTTGGGCACTAGGGACTaGGCTGCCTCGGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: CGSSPENAGGGAPSVPLGLGTRD*AASGMG
Trigger: CCCCATCCCCGAGGCAGCCCAGTCCCTAGTGCCCAA...GCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CCA 90 bp CTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGCAGATTGCAGGGACTCCTCCCATGTTGGCCAGGCTaGTCTCGAACCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LSELGWLTQSKGRLQGLLPCWPG*SRTPDL
Trigger: GAGGTCAGGGGTTCGAGACCAGCCTGGCCAACATGG...GAGGAGTCCCTGCAATCTGCCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp CTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTACTGTGGATCTTCCCCTaGGAATGCAGGTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSADVGNLPLLQGPSGMVLWIFP*ECRWWS
Trigger: GCTCCACCACCTGCATTCTCAGGGGAAGATCCACAG...TACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR TCA 90 bp CTGGGTCACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAGCCCGAGGGAGCTGCTaGGTCGTGAACGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGHLIGIQASALHPMAPEARGSC*VVNGCC
Trigger: GCAGCACCCGTTCACGACTCAGCAGCTCCCTCGGGC...TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTGACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GCCCGTGGCAGGATGACCTCTCAGGATCCTCCCGCTGCTTCATGGTGGCCCAGGGCTCGCCCTGCATGTTaGCAATCCTCACACAGCGTT +
Preference number: 4 (lower is better)
Translates to: ARGRMTSQDPPAASWWPRARPAC*QSSHSV
Trigger: AACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGC...CCTGGGCCACCATGAAGCAGCGGGAGGATCCTGAGAGGTCATCCTGCCACGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGTGCTCTGGTGGCCCGTaGGGATGTAGAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGCSGGP*GCRGCC
Trigger: ACAGCAACCTCTACATCCTCACGGGCCACCAGAGCA...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GCCATGCCCTCAAGATGCAGGCTCCAGCAAGGAGGACGCCCTCCCTGGGGGCTGCAGAGTCAGAACAGTTaGAACTCTGCTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AMPSRCRLQQGGRPPWGLQSQNS*NSAGGW
Trigger: CCACCCTCCAGCAGAGTTTCAACTGTTCTGACTCTG...CAGCCCCCAGGGAGGGCGTCCTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTCCGGCCCCCACGCGCTaGAGCAGCTCGAAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPPAPTR*SSSKRS
Trigger: GGACCGCTTCGAGCTGCTGCAGCGCGTGGGGGCCGG...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp CTCTCCAGGATGATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCACCGGCCCCCACGCGCTaGAGCAGCTCGAAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LSRMMSLWAPSTRKILVSPAPTR*SSSKRS
Trigger: GGACCGCTTCGAGCTGCTGCAGCGCGTGGGGGCCGG...TGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCTGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTCCGCAGAACTCCATaGAGATCCACAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGLRRTP*RSTSGH
Trigger: ATGACCGCTTGTGGATCTGCATGGAGTTCTGCGGAG...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp TGTGGATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCGTGGAGCCCCTTCAGTaGCTCTCGGCAGACGTAGGC +
Preference number: 4 (lower is better)
Translates to: CGSSPENAGGGAPSVPLGVEPLQ*LSADVG
Trigger: GCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCAC...GCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR GCA 90 bp CGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGCCTCCTGGACCGACTaGAGCAGGCTCCCACTCAAC +
Preference number: 4 (lower is better)
Translates to: RRQSAAPPGAQWHGKSPAASWTD*SRLPLN
Trigger: GTTGAGTGGGAGCCTGCTGCAGTCGGTCCAGGAGGC...TGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp AATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGGACAGAGGCTCCTCTaGTGGAGGGTCAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NAGGGAPSVPLGRRRQSAGQRLL*WRVSGE
Trigger: CTCCCCACTGACCCTCCAGCAGAGGAGCCTCTGTCC...GGCAGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp CGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGCATCAGGATCCTCCCGCTaGTTCATGGTGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RRQSAAPPGAQWHGKSPASGSSR*FMVAQA
Trigger: GGCCTGGGCCACCATGAAGCAGCGGGAGGATCCTGA...TGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCCGCACCACACGACACTaGAAGCAGCCTTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSRTTRH*KQPLVS
Trigger: TGACACCAAAGGCTGCTTGCAGTGTCGTGTGGTGCG...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp ATTGTGTCCCTGTCCACCTGGATCACCTGCTGGGCCGAGCCTGGGATCCCCTCAAGCGGCTCATACCACTaGAGCAGGAGCAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: IVSLSTWITCWAEPGIPSSGSYH*SRSRLV
Trigger: CACCAGCCTGCTCCTGCTGCAGTGGTATGAGCCGCT...TGAGGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGACAGGGACACAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCAGAGCGGCTGATCAGTaGCTGGGGCAAAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSRAADQ*LGQKRM
Trigger: CATCCTCTTTTGCCCCAGGCACTGATCAGCCGCTCT...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGGAACAGTTGAAACTCTaGTGGAGGGTGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLEQLKL*WRVAEG
Trigger: CCCCTCAGCCACCCTCCAGCAGAGTTTCAACTGTTC...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTACCTCCAGGGGCCCAGTaGCATGGTAAATCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LSADVGNLPLLQGPSGMVPPGAQ*HGKSPA
Trigger: TGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGG...TACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR CCA 90 bp GGCCCTAGGAACGGGGCCCGCTTGATGGTTCCCATGGTATCGTCTGGGGAGTCCCCTCCAGGGGCCCAGTaGCATGGTAAATCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GPRNGARLMVPMVSSGESPPGAQ*HGKSPA
Trigger: TGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGG...GGACTCCCCAGACGATACCATGGGAACCATCAAGCGGGCCCCGTTCCTAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCGCCCCCGGGAGTGAATaGTGTCTGGAAACATGTCAT +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRAAPGSE*CLETCH
Trigger: ATGACATGTTTCCAGACACCATTCACTCCCGGGGGC...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCCCACGGCTCATTCAGTaGGTCAGTTTCCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACPRLIQ*VSFLPA
Trigger: CGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCCCACGGCTCATTCAGTaGGTCAGTTTCCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSPRLIQ*VSFLPA
Trigger: CGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATCCACGGCTCATTCAGTaGGTCAGTTTCCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: VPLGRRRQSAAPPGAQWHPRLIQ*VSFLPA
Trigger: CGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG...ATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCTCCCATGGTATCGTCTaGGGAGTCCAGCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACSHGIV*GVQLLE
Trigger: TTCCAGGAGCTGGACTCCCCAGACGATACCATGGGA...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp TCTGTGGATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGTGGGGAGCTGTTaGGGCCTGAAGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SVDLPLRMQVVEPLQCLSAVGSC*GLKEVG
Trigger: CCCCACCTCCTTCAGGCCCCAACAGCTCCCCACTGC...CGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATCCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGGGGCCCAGATGTGCGTaGATTTCCCTGAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLGPRCA*ISLRVT
Trigger: TGTCACTCTCAGGGAAATCCACGCACATCTGGGCCC...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGCAGATTGCAGGGACTCCTCGGCTGGGCAGAGGGCTaGAGAAGTTCTTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSELGWLTQSKGRLQGLLGWAEG*RSSSAA
Trigger: TGCTGCTGAAGAACTTCTCCAGCCCTCTGCCCAGCC...GAGGAGTCCCTGCAATCTGCCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGTCCAGGGGCAGGACATaGAACAGGACGCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQSRGRT*NRTRQP
Trigger: CGGCTGCCGCGTCCTGTTCCATGTCCTGCCCCTGGA...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GGGAAATCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATGTGGGATCCCCTCAGGTaGGATGAGGATGTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: GKSKVSSGASVAVGSPCMWDPLR*DEDVGR
Trigger: ACGCCCGACATCCTCATCCCACCTGAGGGGATCCCA...CATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCCTGGGTCACCTCATTaGTATCCAGGCTTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLPGSPH*YPGFGL
Trigger: AAGGCCGAAGCCTGGATACCAATGAGGTGACCCAGG...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGAGGATGATGTCTCTGTaGGCCCCAAGCACTCGGAAG +
Preference number: 4 (lower is better)
Translates to: CLSADVGNLPLLQGPSGMRMMSL*APSTRK
Trigger: CTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCT...CATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGGGCCTGGGCTCCTCTaGTCTAGGATGGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: RRQSAAPPGAQWHGKSPAGPGLL*SRMGPF
Trigger: AAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCC...TGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CCA 90 bp GCACAAGCTACAGGAGAATGGCCATGCCCTCAAGATGCAGGCTCCAGCAAGGAGTCTGGGGGCTCCTCCTaGGCCCTTCCAGGGGTCACC +
Preference number: 4 (lower is better)
Translates to: AQATGEWPCPQDAGSSKESGGSS*ALPGVT
Trigger: GGTGACCCCTGGAAGGGCCCAGGAGGAGCCCCCAGA...CTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGCCATTCTCCTGTAGCTTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GGCCATGGCCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCACCTAGGCAGTAGGTaGAGGCAGGGGATACAGGTC +
Preference number: 4 (lower is better)
Translates to: GHGLLSPLPGFSKTLGALHLGSR*RQGIQV
Trigger: GACCTGTATCCCCTGCCTCCACCTACTGCCTAGGTG...CAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGGCCATGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GGCCATGGCCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCACTTACCCCACCCTaGTCCCAACATTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GHGLLSPLPGFSKTLGALPLTPP*SQHSSE
Trigger: CTCGGAGGAATGTTGGGACCAGGGTGGGGTAAGTGG...CAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGGCCATGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCACAGGTTTCTGCCCATaGAGGGGCAACTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACTGFCP*RGNWTA
Trigger: TGCTGTCCAGTTGCCCCTCCATGGGCAGAAACCTGT...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGACCTGGATCACCTGCTaGGCCGAGCATGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGTWITC*AEHGTG
Trigger: TCCTGTTCCATGCTCGGCCCAGCAGGTGATCCAGGT...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424945.5
CDS-3UTR TCA 90 bp CAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCTGGTGAAACTGCGGCCAGTTCGGACGTaGCCGTGTCGCGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: QWVSFLPAWGAKFHLVKLRPVRT*PCRGPC
Trigger: ACAAGGCCCGCGACACGGTCACGTCCGAACTGGCCG...CAGTTTCACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCGAAGGTTGGCTCCCTTaGTGTCTCTGTGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACEGWLP*CLCGSS
Trigger: GGAAGATCCACAGAGACATCAAGGGAGCCAACCTTC...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GCCCGTGGCAGGATGACCTCTCAGGATCCTCCCGCTGCTTCATGGTGGCCCAGGGAAGGTTGGCTCCCTTaGTGTCTCTGTGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: ARGRMTSQDPPAASWWPREGWLP*CLCGSS
Trigger: GGAAGATCCACAGAGACATCAAGGGAGCCAACCTTC...CCTGGGCCACCATGAAGCAGCGGGAGGATCCTGAGAGGTCATCCTGCCACGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCAGTAGGGAGTCCCAATaGAAGACCTCCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSSRESQ*KTSSWP
Trigger: TGGCCAAGAGGAGGTCTTTCATTGGGACTCCCTACT...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GCCCGTGAGGATGTAGAGGTTGCTGTGCGCCTCTGGGTTGTCAGTGGGAATGCTGGAGCTGCTGAGTCGTaGACGGGTGCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: AREDVEVAVRLWVVSGNAGAAES*TGAAGA
Trigger: AGCTCCTGCAGCACCCGTTCACGACTCAGCAGCTCC...AGCATTCCCACTGACAACCCAGAGGCGCACAGCAACCTCTACATCCTCACGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp CACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAGGCCAGGGAGCTGCTGAGTCGTaGACGGGTGCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HLIGIQASALHPMAPEGQGAAES*TGAAGA
Trigger: AGCTCCTGCAGCACCCGTTCACGACTCAGCAGCTCC...CTGGCCTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGGCCCGAGGGAGCTGCTaGGTCGTGAACGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLARGSC*VVNGCC
Trigger: GCAGCACCCGTTCACGACTCAGCAGCTCCCTCGGGC...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp ATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGTGCTGCCCCCGGGAGTaGATGGTGTCTGGAAACATG +
Preference number: 4 (lower is better)
Translates to: MQVVEPLQCLSADVGNLPCCPRE*MVSGNM
Trigger: CATGTTTCCAGACACCATTCACTCCCGGGGGCAGCA...CGGCAGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GCCAGTGTGGCCGTGGGCTCGCCCTGCATGTTGACAATCCTCACACAGCGTTCAGGAACGGGGCCCGCTTaGTGGTTCCCATGGTATCGT +
Preference number: 4 (lower is better)
Translates to: ASVAVGSPCMLTILTQRSGTGPA*WFPWYR
Trigger: ACGATACCATGGGAACCATCAAGCGGGCCCCGTTCC...TGAACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGCCACACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGCCATTCCCTTACTCGTaGGGGTCTCCTGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLPFPYS*GSPEHW
Trigger: CCAGTGCTCAGGAGACCCTCACGAGTAAGGGAATGG...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp TGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGACTCACGCAGGATGGTaGTTTCCTGGGTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: CLSADVGNLPLLQGPSGMTHAGW*FPGSSL
Trigger: CAAGCTAGACCCAGGAAATCACCATCCTGCGTGAGT...CATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp TGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGCTCCGCAGAACTCCATaGAGATCCACAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: CLSADVGNLPLLQGPSGMLRRTP*RSTSGH
Trigger: ATGACCGCTTGTGGATCTGCATGGAGTTCTGCGGAG...CATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR GCA 90 bp CACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAGGCCAGTCAGGATCCTCCCGCTaGTTCATGGTGGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HLIGIQASALHPMAPEGQSGSSR*FMVAQA
Trigger: GGCCTGGGCCACCATGAAGCAGCGGGAGGATCCTGA...CTGGCCTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp ATTGTGTCCCTGTCCACCTGGATCACCTGCTGGGCCGAGCCTGGGATCCCCTCAGAGAGGGGAACCTGTTaGTGTAGCCTCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: IVSLSTWITCWAEPGIPSERGTC*CSLRCS
Trigger: TGAGCAGCGGAGGCTACAGCAACAGGTTCCCCTCTC...TGAGGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGACAGGGACACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGCGCACCACACGACACTaGAAGCAGCCTTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGRTTRH*KQPLVS
Trigger: TGACACCAAAGGCTGCTTGCAGTGTCGTGTGGTGCG...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp ATTGTGTCCCTGTCCACCTGGATCACCTGCTGGGCCGAGCCTGGGATCCCCTCATCCAGGCTTCGGCCTTaGATCCCATGGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: IVSLSTWITCWAEPGIPSSRLRP*IPWLQK
Trigger: CTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGA...TGAGGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGACAGGGACACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGGTTTCCCAGGACAAATaGAGGGGCAGGCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGVSQDK*RGRLLA
Trigger: TGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGAAAC...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGAGTTCTGAGCAAGGATaGAGGGGAAGGCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: VEPLQCLSADVGNLPLLQSSEQG*RGRHSA
Trigger: GGCACTGTGCCTTCCCCTGCATCCTTGCTCAGAACT...CTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCGCAGAGCCCTCAAACTaGAAAGCTGAGGGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSAEPSN*KAEGQF
Trigger: GAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGC...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCATGGCCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCTGGTAGTGAGCAGGTaGTGGACATGCCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: GHGLLSPLPGFSKTLGALLVVSR*WTCHRE
Trigger: TTCCCTGTGGCATGTCCAGCACCTGCTCACTACCAG...CAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGGCCATGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GCGGTCATTCCTGAGGTAGCTGCCAATGTAGGCCACCACATTGGGGTGGCGGCATGTAGGCCACCACATTaGGGTGGCGGCACTCACGCA +
Preference number: 4 (lower is better)
Translates to: AVIPEVAANVGHHIGVAACRPPH*GGGTHA
Trigger: TGCGTGAGTGCCGCCACCCCAATGTGGTGGCCTACA...TGCCGCCACCCCAATGTGGTGGCCTACATTGGCAGCTACCTCAGGAATGACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR CCA 90 bp GATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACTGTAGGCCACCACATTaGGGTGGCGGCACTCACGCA +
Preference number: 4 (lower is better)
Translates to: DLPLRMQVVEPLQCLSADCRPPH*GGGTHA
Trigger: TGCGTGAGTGCCGCCACCCCAATGTGGTGGCCTACA...GTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR CCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCGCCCCCGGGAGTGAATaGTGTCTGGAAACATGTCAT +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACAPGSE*CLETCH
Trigger: ATGACATGTTTCCAGACACCATTCACTCCCGGGGGC...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp TCTGTGGATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGCAGAGGCTCCTCTGCTaGAGGGTCAGTGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SVDLPLRMQVVEPLQCLSQRLLC*RVSGEW
Trigger: CCACTCCCCACTGACCCTCCAGCAGAGGAGCCTCTG...CGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATCCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGCGCAGTGGGGAGCTGTTaGGGCCTGAAGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VLQAHHSLDGEIKGQLRCAVGSC*GLKEVG
Trigger: CCCCACCTCCTTCAGGCCCCAACAGCTCCCCACTGC...GCACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp ATTGTGTCCCTGTCCACCTGGATCACCTGCTGGGCCGAGCCTGGGATCCCCTCAGGCTGGGCAGAGGGCTaGAGAAGTTCTTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IVSLSTWITCWAEPGIPSGWAEG*RSSSAA
Trigger: TGCTGCTGAAGAACTTCTCCAGCCCTCTGCCCAGCC...TGAGGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGACAGGGACACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATGTTGACAATCCTCACACAGTGGGATCCCCTCAGGTaGGATGAGGATGTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: SGASVAVGSPCMLTILTQWDPLR*DEDVGR
Trigger: ACGCCCGACATCCTCATCCCACCTGAGGGGATCCCA...CTGTGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGCCACACTGGCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GAAAGCAGCACAGTTGTTACTTGGGGATGGGAGGCAAGAAGCAGGAGGGTGGGCACCTGGATCACCTGCTaGGCCGAGCCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: ESSTVVTWGWEARSRRVGTWITC*AEPGIP
Trigger: GGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGT...GCCCACCCTCCTGCTTCTTGCCTCCCATCCCCAAGTAACAACTGTGCTGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGGGAGCCCCCTCCGCAGAACTCCTGGGTCACCTCATTaGTATCCAGGCTTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: PGAQWHGKSPAGSPLRRTPGSPH*YPGFGL
Trigger: AAGGCCGAAGCCTGGATACCAATGAGGTGACCCAGG...AGTTCTGCGGAGGGGGCTCCCTGCAGGAGATTTACCATGCCACTGGGCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGAGGATGATGTCTCTGTaGGCCCCAAGCACTCGGAAG +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGRMMSL*APSTRK
Trigger: CTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCT...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAGTTGCTGTGCGCCTCTaGGTTGTCAGTGGGAATGCT +
Preference number: 4 (lower is better)
Translates to: LSADVGNLPLLQGPSGMVVAVRL*VVSGNA
Trigger: AGCATTCCCACTGACAACCCAGAGGCGCACAGCAAC...TACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CTGGGTCACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAATTGGGCACTAGGGACTaGGCTGCCTCGGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: LGHLIGIQASALHPMAPELGTRD*AASGMG
Trigger: CCCCATCCCCGAGGCAGCCCAGTCCCTAGTGCCCAA...TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGCAGGCTGGAGTGCAGTaGCATGTTCTAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGQAGVQ*HVLGSL
Trigger: CAGTGAGCCTAGAACATGCCACTGCACTCCAGCCTG...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 72 bp CTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTaGACTTTCACCAGGATGACTCCGGGTATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LRRPEAHIMVLP*TFTRMTPGMGQ
Trigger: CTGGCCCATACCCGGAGTCATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp TGTGGATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCCTGTGGATCTTCCCCTaGGAATGCAGGTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: CGSSPENAGGGAPSVPLGLWIFP*ECRWWS
Trigger: GCTCCACCACCTGCATTCTCAGGGGAAGATCCACAG...GCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR TCA 90 bp GAAAGCAGCACAGTTGTTACTTGGGGATGGGAGGCAAGAAGCAGGAGGGTGGGCGGAGCTGCTGAGTCGTaGACGGGTGCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ESSTVVTWGWEARSRRVGGAAES*TGAAGA
Trigger: AGCTCCTGCAGCACCCGTTCACGACTCAGCAGCTCC...GCCCACCCTCCTGCTTCTTGCCTCCCATCCCCAAGTAACAACTGTGCTGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGCCAAATTTCACCTGGTaGAACTGGATCTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGPNFTW*NWISEG
Trigger: CCCCTCGGAGATCCAGTTTCACCAGGTGAAATTTGG...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GCGGTCATTCCTGAGGTAGCTGCCAATGTAGGCCACCACATTGGGGTGGCGGCATCCCGAGTAACAGGGTaGATCCAGGTGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: AVIPEVAANVGHHIGVAASRVTG*IQVTAA
Trigger: CGCTGCTGTCACCTGGATTCACCCTGTTACTCGGGA...TGCCGCCACCCCAATGTGGTGGCCTACATTGGCAGCTACCTCAGGAATGACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp TGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGCACAGCGTTCAAAGCTaGCTAGGATTGTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: CLSADVGNLPLLQGPSGMHSVQS*LGLCPC
Trigger: ACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTG...CATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCATGGCCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCTCCGCAGAACTCCATaGAGATCCACAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: GHGLLSPLPGFSKTLGALLRRTP*RSTSGH
Trigger: ATGACCGCTTGTGGATCTGCATGGAGTTCTGCGGAG...CAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGGCCATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR GCA 90 bp GCAGCCATTGAAGACCTTGGAGAAGCAGGCGCCCATATGCACCTTGGGAGTTGGGTGGAGCCCCTTCAGTaGCTCTCGGCAGACGTAGGC +
Preference number: 4 (lower is better)
Translates to: AAIEDLGEAGAHMHLGSWVEPLQ*LSADVG
Trigger: GCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCAC...CCAACTCCCAAGGTGCATATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp TCCACTCTTCCTCCCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGTGGAACAGAGGGGGCTaGAGCTCGCCCAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: STLPPTAHSVGQFPSCVGWNRGG*SSPSSM
Trigger: CATTGAGCTGGGCGAGCTGCAGCCCCCTCTGTTCCA...CCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGGGAGGAAGAGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCCTAGGAACGGGGCCCGCTTGATGGTTCCCATGGTATCGTCTGGGGAGTCCGGTCAGTTTCCTTCCTaGGTGGGGCGCCAAATTTCA +
Preference number: 4 (lower is better)
Translates to: GPRNGARLMVPMVSSGESGQFPS*VGRQIS
Trigger: TGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACC...GGACTCCCCAGACGATACCATGGGAACCATCAAGCGGGCCCCGTTCCTAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GCACAAGCTACAGGAGAATGGCCATGCCCTCAAGATGCAGGCTCCAGCAAGGAGGGACAGAGGCTCCTCTaGTGGAGGGTCAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: AQATGEWPCPQDAGSSKEGQRLL*WRVSGE
Trigger: CTCCCCACTGACCCTCCAGCAGAGGAGCCTCTGTCC...CTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGCCATTCTCCTGTAGCTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GGCCATGGCCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGAGCAGCAGAAACTTCTaGAGCGGCTCATACCACTGC +
Preference number: 4 (lower is better)
Translates to: GHGLLSPLPGFSKTLGALSSRNF*SGSYHC
Trigger: GCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCT...CAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGGCCATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR GCA 90 bp CTGGGTCACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAGCCCCAACACACACCTaGGGCAGCTCCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: LGHLIGIQASALHPMAPEAPTHT*GSSFPS
Trigger: GGATGGGAAGGAGCTGCCGCAGGTGTGTGTTGGGGC...TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GCACAAGCTACAGGAGAATGGCCATGCCCTCAAGATGCAGGCTCCAGCAAGGAGTCCACCTGGATCACCTaGTGGGCCGAGCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: AQATGEWPCPQDAGSSKESTWIT*WAEPGI
Trigger: GATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGA...CTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGCCATTCTCCTGTAGCTTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGTCCAGGCTTCGGCCTTaGATCCCATGGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: DVGNLPLLQGPSGMVNLLSRLRP*IPWLQK
Trigger: CTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGA...CAGGAGATTTACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GCAGCCATTGAAGACCTTGGAGAAGCAGGCGCCCATATGCACCTTGGGAGTTGGGCCACCACATTGGGGTaGCGGCACTCACGCAGGATG +
Preference number: 4 (lower is better)
Translates to: AAIEDLGEAGAHMHLGSWATTLG*RHSRRM
Trigger: CATCCTGCGTGAGTGCCGCCACCCCAATGTGGTGGC...CCAACTCCCAAGGTGCATATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TGGGTGAGGCGGTTGGTGGGGATGGAGAGGGGAACCTGTTGCTGTAGCCTCCGCAGTTTCCTTCCTGCGTaGGGCGCCAAATTTCACCTG +
Preference number: 4 (lower is better)
Translates to: WVRRLVGMERGTCCCSLRSFLPA*GAKFHL
Trigger: CAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACT...GCGGAGGCTACAGCAACAGGTTCCCCTCTCCATCCCCACCAACCGCCTCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGTCCTCCAGGGCCTCCTaGACCGACTGCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLSSRAS*TDCSRL
Trigger: GAGCCTGCTGCAGTCGGTCCAGGAGGCCCTGGAGGA...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGTGGGGGCAGGGTTCCTaGGGGACTGGACAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLWGQGS*GTGQRL
Trigger: GAGCCTCTGTCCAGTCCCCCAGGAACCCTGCCCCCA...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGCCCGCTGCTTCATGGTaGCCCAGGCCGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQPAASW*PRPWAA
Trigger: TGCTGCCCACGGCCTGGGCCACCATGAAGCAGCGGG...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GGGAAATCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATGGGGCCCAGATGTGCGTaGATTTCCCTGAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: GKSKVSSGASVAVGSPCMGPRCA*ISLRVT
Trigger: TGTCACTCTCAGGGAAATCCACGCACATCTGGGCCC...CATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TGTGCGTGGATTTCCCTGAGAGTGACAGCAGCACGTTGTTCACGCAGTAGAGCCCGGCCAGCAGGAAGGTaGCACCCGTGTAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: CAWISLRVTAARCSRSRARPAGR*HPCRGS
Trigger: GGAACCCCTACACGGGTGCCACCTTCCTGCTGGCCG...GGCTCTACTGCGTGAACAACGTGCTGCTGTCACTCTCAGGGAAATCCACGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGACCTGGATCACCTGCTaGGCCGAGCCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLTWITC*AEPGIP
Trigger: GGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGT...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GAACGGGTGCTGCAGGAGCTTCTCTGCTGTCGGCCTCTTCTTAGGATTCTTGGTACCTGGATCACCTGCTaGGCCGAGCCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: ERVLQELLCCRPLLRILGTWITC*AEPGIP
Trigger: GGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGT...ACCAAGAATCCTAAGAAGAGGCCGACAGCAGAGAAGCTCCTGCAGCACCCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTGCTCAGGTGCCAGTGTaGCCGTGGGCTCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLAQVPV*PWARPA
Trigger: TGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGC...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGCCTGGGTCACCTCATTaGTATCCAGGCTTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLPGSPH*YPGFGL
Trigger: AAGGCCGAAGCCTGGATACCAATGAGGTGACCCAGG...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCATCTGCATGAGTCCTTaGGGTGCTAAACTACAGCAG +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGICMSP*GAKLQQ
Trigger: CTGCTGTAGTTTAGCACCCCAAGGACTCATGCAGAT...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGGGGGCAAGGGTGCCCTaGATGAGAGTCCCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: DVGNLPLLQGPSGMVNLLGARVP*MRVPLL
Trigger: CAACAAAGGGACTCTCATCCAGGGCACCCTTGCCCC...CAGGAGATTTACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CCA 90 bp CCTTGGGAGTCTGGTAGACGGACACAGGCTAGCCTTCCCATCCAATCTGATGATGAGGGAACAGCCCTCTaGGGGCTCCTCCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PWESGRRTQASLPIQSDDEGTAL*GLLLGP
Trigger: AGGGCCCAGGAGGAGCCCCCAGAGGGCTGTTCCCTC...ATCATCAGATTGGATGGGAAGGCTAGCCTGTGTCCGTCTACCAGACTCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAAGCTACAGGAGAATaGCCATGCCCTCAAGATGCA +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLQATGE*PCPQDA
Trigger: TGCATCTTGAGGGCATGGCCATTCTCCTGTAGCTTG...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAACCCTCCCAGTCACTaGACAGAGTCAGAACAGTTG +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACNPPSH*TESEQL
Trigger: CAACTGTTCTGACTCTGTCCAGTGACTGGGAGGGTT...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGAGTAGGGAGTCCCAATaGAAGACCTCCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLSRESQ*KTSSWP
Trigger: TGGCCAAGAGGAGGTCTTTCATTGGGACTCCCTACT...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GGGGAAATCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATAGTAGGGAGTCCCAATaGAAGACCTCCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GEIKGQLRCQCGRGLALHSRESQ*KTSSWP
Trigger: TGGCCAAGAGGAGGTCTTTCATTGGGACTCCCTACT...ATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp CCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACGGAACGGGGCCCGCTTaGTGGTTCCCATGGTATCGT +
Preference number: 4 (lower is better)
Translates to: PRLIQWVSFLPAWGAKFHGTGPA*WFPWYR
Trigger: ACGATACCATGGGAACCATCAAGCGGGCCCCGTTCC...GTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGCGCAGGGGGCAGCCATTaGAGACCTTGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: VLQAHHSLDGEIKGQLRCAGGSH*RPWRSR
Trigger: CCTGCTTCTCCAAGGTCTTCAATGGCTGCCCCCTGC...GCACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GCCCCCTCCGCAGAACTCCATGCAGATCCACAAGCGGTCATTCCTGAGGTAGCTTCCCGAGTAACAGGGTaGATCCAGGTGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: APSAELHADPQAVIPEVASRVTG*IQVTAA
Trigger: CGCTGCTGTCACCTGGATTCACCCTGTTACTCGGGA...AGCTACCTCAGGAATGACCGCTTGTGGATCTGCATGGAGTTCTGCGGAGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GGCCATGGCCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCACAGCGTTCAAAGCTaGCTAGGATTGTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GHGLLSPLPGFSKTLGALHSVQS*LGLCPC
Trigger: ACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTG...CAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGGCCATGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GCCAGTGTGGCCGTGGGCTCGCCCTGCATGTTGACAATCCTCACACAGCGTTCAGAATGCTCTCCAGGATaGTGTCTCTGTGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: ASVAVGSPCMLTILTQRSECSPG*CLCGPQ
Trigger: TTGGGGCCCACAGAGACATCATCCTGGAGAGCATTC...TGAACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGCCACACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTTGCTCTGGTGGCCCGTaGGGATGTAGAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ENAGGGAPSVPLGRRRQSCSGGP*GCRGCC
Trigger: ACAGCAACCTCTACATCCTCACGGGCCACCAGAGCA...AGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp CTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCTGGTGGAAGGAGGCGGGAGATaGGGTGGGTTCACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LIQWVSFLPAWGAKFHLVEGGGR*GGFTPP
Trigger: AGGGGGAGTGAACCCACCTCATCTCCCGCCTCCTTC...CACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR TCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGCCAGGGGTCACCCAGTaGGATCCTACGTGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARPGVTQ*DPTWGK
Trigger: CTTGCCCCACGTAGGATCTCACTGGGTGACCCCTGG...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp GGCCATGGCCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCAGACCCTTGGAGAATaGCAGCGTAAGCACAAGCTA +
Preference number: 4 (lower is better)
Translates to: GHGLLSPLPGFSKTLGALQTLGE*QRKHKL
Trigger: TAGCTTGTGCTTACGCTGTCATTCTCCAAGGGTCTG...CAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGGCCATGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGACGGGAACATGGGTGTaGATGCCTGGTGTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLTGTWV*MPGVKR
Trigger: TCTCTTCACACCAGGCATTCACACCCATGTTCCCGT...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGTTAAAGAGTCTGGTCTaGCCCTCCCACAGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGLKSLV*PSHRFL
Trigger: CAGAAACCTGTGGGAGGGTCAGACCAGACTCTTTAA...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCATGTCCATCAACAGGTaGACAGCTAACCAAACTGGT +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRAMSINR*TANQTG
Trigger: ACCAGTTTGGTTAGCTGTTCACCTGTTGATGGACAT...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp AATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCCATTGTAGCCACCTTTaGGCTCCACAGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: NAGGGAPSVPLGRRRQSAHCSHL*APQQPP
Trigger: AGGTGGCTGCTGTGGAGCGCAAAGGTGGCTACAATG...GGCAGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp TGTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGGCCTCCTGGACCGACTaGAGCAGGCTCCCACTCAAC +
Preference number: 4 (lower is better)
Translates to: CPAGTPQSRWGNQRSAQVASWTD*SRLPLN
Trigger: GTTGAGTGGGAGCCTGCTGCAGTCGGTCCAGGAGGC...CACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGTCATGGGCCCAGATGTaGGTGGATTTCCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLSWAQM*VDFPES
Trigger: ACTCTCAGGGAAATCCACGCACATCTGGGCCCATGA...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGGGATCATGGGCCCAGATGTaGGTGGATTTCCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: GNLPLLQGPSGMVNLLQGSWAQM*VDFPES
Trigger: ACTCTCAGGGAAATCCACGCACATCTGGGCCCATGA...TCCCTGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGGAGAGGGGAACCTGTTaGTGTAGCCTCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQERGTC*CSLRCS
Trigger: TGAGCAGCGGAGGCTACAGCAACAGGTTCCCCTCTC...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp TCCACTCTTCCTCCCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGGAGAGGGGAACCTGTTaGTGTAGCCTCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: STLPPTAHSVGQFPSCVGERGTC*CSLRCS
Trigger: TGAGCAGCGGAGGCTACAGCAACAGGTTCCCCTCTC...CCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGGGAGGAAGAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGTGCCCCTAGAAGGCTaGTGGGGGCCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQVPLEG*WGPWPP
Trigger: AGGAGGCCATGGCCCCCAGCAGCCTTCTAGGGGCAC...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR GCA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGGCCATGCCCTCAAGATaGAGGCTCCAGCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQAMPSR*RLQQGG
Trigger: TCCTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGC...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp CTGGGTCACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAATGGAAGCTCATGGGGTaGAGGTGGAACAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LGHLIGIQASALHPMAPEWKLMG*RWNRGG
Trigger: GCCCCCTCTGTTCCACCTGCACCCCATGAGCTTCCA...TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTGACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433890.5
CDS-3UTR CCA 90 bp TCTGTGGATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGCCTCCAGGGGCCCAGTaGCATGGTAAATCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SVDLPLRMQVVEPLQCLSPPGAQ*HGKSPA
Trigger: TGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGG...CGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR CCA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCAGTTTGAGAAAGTGGTaGAAATTCTGGGTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGSLRKW*KFWVQR
Trigger: TCGCTGGACCCAGAATTTCCACCACTTTCTCAAACT...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGGCCAGTTTGAGAAAGTaGTGGAAATTCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLASLRK*WKFWVQ
Trigger: CTGGACCCAGAATTTCCACCACTTTCTCAAACTGGC...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCGCCAGTTTGAGAAAGTaGTGGAAATTCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACASLRK*WKFWVQ
Trigger: CTGGACCCAGAATTTCCACCACTTTCTCAAACTGGC...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCGGAGTGAATGGTGTCTaGAAACATGTCATAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRAGVNGV*KHVIGL
Trigger: GAGACCTATGACATGTTTCCAGACACCATTCACTCC...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGTCCTCCAGGGCCTCCTaGACCGACTGCAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQSSRAS*TDCSRL
Trigger: GAGCCTGCTGCAGTCGGTCCAGGAGGCCCTGGAGGA...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GTCAGGAATCTTGGTGGACAGAGCAAAGCGCCTGGGGATGATGCGCTGGGTGAGGGGGAGTCCAGCTCCTaGAATTCTGAGGCTGACCGA +
Preference number: 4 (lower is better)
Translates to: VRNLGGQSKAPGDDALGEGESSS*NSEADR
Trigger: TCGGTCAGCCTCAGAATTCCAGGAGCTGGACTCCCC...CTCACCCAGCGCATCATCCCCAGGCGCTTTGCTCTGTCCACCAAGATTCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TGTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGCTGCTGGAGGGTCAGTaGGGAGTGGCCCTAGGAACG +
Preference number: 4 (lower is better)
Translates to: CPAGTPQSRWGNQRSAQVLLEGQ*GVALGT
Trigger: CGTTCCTAGGGCCACTCCCCACTGACCCTCCAGCAG...CACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTCAGGTGACAGCAGCGTaGATCCGCAGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPQVTAA*IRRGQP
Trigger: TGGCTGCCCCCTGCGGATCCACGCTGCTGTCACCTG...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCAGGTGACAGCAGCGTaGATCCGCAGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLQVTAA*IRRGQP
Trigger: TGGCTGCCCCCTGCGGATCCACGCTGCTGTCACCTG...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GCCCGTGAGGATGTAGAGGTTGCTGTGCGCCTCTGGGTTGTCAGTGGGAATGCTCTGCTCAAACAGGCCTaGGAGGTCATGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: AREDVEVAVRLWVVSGNALLKQA*EVMGPD
Trigger: ATCTGGGCCCATGACCTCCCAGGCCTGTTTGAGCAG...AGCATTCCCACTGACAACCCAGAGGCGCACAGCAACCTCTACATCCTCACGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTCTGCTCAAACAGGCCTaGGAGGTCATGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: ENAGGGAPSVPLGRRRQSLLKQA*EVMGPD
Trigger: ATCTGGGCCCATGACCTCCCAGGCCTGTTTGAGCAG...AGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGGCTCAGGTGCCAGTGTaGCCGTGGGCTCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWAQVPV*PWARPA
Trigger: TGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGC...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCGGCCTTGCATCCCATaGCTCCAGAAGGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PRLIQWVSFLPAWGAKFHRPCIP*LQKAST
Trigger: TGTGCTGGCCTTCTGGAGCCATGGGATGCAAGGCCG...GTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GCCCGTGGCAGGATGACCTCTCAGGATCCTCCCGCTGCTTCATGGTGGCCCAGGTCATCTGTGATCTCCTaGGTCACCTCATTGGTATCC +
Preference number: 4 (lower is better)
Translates to: ARGRMTSQDPPAASWWPRSSVIS*VTSLVS
Trigger: GGATACCAATGAGGTGACCCAGGAGATCACAGATGA...CCTGGGCCACCATGAAGCAGCGGGAGGATCCTGAGAGGTCATCCTGCCACGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACAGGATGATGTCTCTGTaGGCCCCAAGCACTCGGAAG +
Preference number: 4 (lower is better)
Translates to: DLPLRMQVVEPLQCLSADRMMSL*APSTRK
Trigger: CTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCT...GTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTTGCTGTGCGCCTCTaGGTTGTCAGTGGGAATGCT +
Preference number: 4 (lower is better)
Translates to: DLPLRMQVVEPLQCLSADVAVRL*VVSGNA
Trigger: AGCATTCCCACTGACAACCCAGAGGCGCACAGCAAC...GTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGGGCCTGGGCTCCTCTaGTCTAGGATGGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARGPGLL*SRMGPF
Trigger: AAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCC...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GCAGCCATTGAAGACCTTGGAGAAGCAGGCGCCCATATGCACCTTGGGAGTTGGAGGCGGGAGATGAGGTaGGTTCACTCCCCCTACCCA +
Preference number: 4 (lower is better)
Translates to: AAIEDLGEAGAHMHLGSWRREMR*VHSPYP
Trigger: TGGGTAGGGGGAGTGAACCCACCTCATCTCCCGCCT...CCAACTCCCAAGGTGCATATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCCCCTAGAAGGCTGCTaGGGGCCATGGCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLPLEGC*GPWPPV
Trigger: GACAGGAGGCCATGGCCCCCAGCAGCCTTCTAGGGG...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGGAGGACGCCCTCCCTaGGGGCTGGTCTGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPGGRPP*GLVCFW
Trigger: CCAGAAACAGACCAGCCCCCAGGGAGGGCGTCCTCC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGCTGAGCCTACTCGCATaGCTGCCATCCACCTACCAC +
Preference number: 4 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQLSLLA*LPSTYH
Trigger: GTGGTAGGTGGATGGCAGCCATGCGAGTAGGCTCAG...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GAAAGCAGCACAGTTGTTACTTGGGGATGGGAGGCAAGAAGCAGGAGGGTGGGCATGTGTTCCCTCCCCTaGGCTGGCTCCCCATTCCAG +
Preference number: 4 (lower is better)
Translates to: ESSTVVTWGWEARSRRVGMCSLP*AGSPFQ
Trigger: CTGGAATGGGGAGCCAGCCCAGGGGAGGGAACACAT...GCCCACCCTCCTGCTTCTTGCCTCCCATCCCCAAGTAACAACTGTGCTGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGGGCACTGTCTGCTGCTaGCCGGTTGGTGAACGGAAA +
Preference number: 4 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQGTVCC*PVGERK
Trigger: TTTCCGTTCACCAACCGGCCAGCAGCAGACAGTGCC...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGGGCTTACCAAGGGCATaGGAAACTTTCCAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLGLPRA*ETFQSE
Trigger: TTCACTCTGGAAAGTTTCCCATGCCCTTGGTAAGCC...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGGAGCTGTTGGGGCCTaGGGGACTGGACAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPGAVGA*GTGQRL
Trigger: GAGCCTCTGTCCAGTCCCCCAGGCCCCAACAGCTCC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377350.7
CDS-3UTR TCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGCCCCTGGGTCTAGCTTaGCTATCTTCACGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARPLGLA*LSSRRP
Trigger: TGGCCGCCGTGAAGATAGTCAAGCTAGACCCAGGGG...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000377350.7
CDS-3UTR TCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCCTGCTGGAGGGAGCTaGTGTCGTCCCCTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLPAGGS*CRPLGL
Trigger: TAGACCCAGGGGACGACATCAGCTCCCTCCAGCAGG...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000377350.7
CDS-3UTR TCA 90 bp CTGGGTCACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAACTGTGGATCTTCCCCTaGGAATGCAGGTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LGHLIGIQASALHPMAPELWIFP*ECRWWS
Trigger: GCTCCACCACCTGCATTCTCAGGGGAAGATCCACAG...TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTGACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGGAACGGGGCCCGCTTaGTGGTTCCCATGGTATCGT +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARGTGPA*WFPWYR
Trigger: ACGATACCATGGGAACCATCAAGCGGGCCCCGTTCC...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp TGTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGGCAGGGGGCAGCCATTaGAGACCTTGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: CPAGTPQSRWGNQRSAQVAGGSH*RPWRSR
Trigger: CCTGCTTCTCCAAGGTCTTCAATGGCTGCCCCCTGC...CACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGCAGGGTGAATCCAGGTaGCAGCAGCGTGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARQGESR*QQRGSA
Trigger: TGCGGATCCACGCTGCTGTCACCTGGATTCACCCTG...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp TGTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGCAGGGTGAATCCAGGTaGCAGCAGCGTGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: CPAGTPQSRWGNQRSAQVQGESR*QQRGSA
Trigger: TGCGGATCCACGCTGCTGTCACCTGGATTCACCCTG...CACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GCCCGTGAGGATGTAGAGGTTGCTGTGCGCCTCTGGGTTGTCAGTGGGAATGCTCCAGGAGCAGCGATGTaGAATCAGCTTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: AREDVEVAVRLWVVSGNAPGAAM*NQLLQR
Trigger: ACGCTGGAGAAGCTGATTTCACATCGCTGCTCCTGG...AGCATTCCCACTGACAACCCAGAGGCGCACAGCAACCTCTACATCCTCACGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp TCTGTGGATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGACTCACGCAGGATGGTaGTTTCCTGCTGGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: SVDLPLRMQVVEPLQCLSTHAGW*FPAGSS
Trigger: GCTAGACCCAGCAGGAAATCACCATCCTGCGTGAGT...CGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATCCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444560.1
CDS-3UTR GCA 90 bp ATGCATGCAACAGGGATGACTCGCAAATCCTTATGCTCAGCTAAGCAAGAAGCCCGGTCCCGCGGGTCCTaGAGCGACACATCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: MHATGMTRKSLCSAKQEARSRGS*SDTSRS
Trigger: GCTGCGGGATGTGTCGCTGCAGGACCCGCGGGACCG...GGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp TCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATGTTGACACTCCGCAGAACTCCATaGAGATCCACAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: SKVSSGASVAVGSPCMLTLRRTP*RSTSGH
Trigger: ATGACCGCTTGTGGATCTGCATGGAGTTCTGCGGAG...TGTCAACATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGGACAGAGGCTCCTCTaGTGGAGGGTCAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPGQRLL*WRVSGE
Trigger: CTCCCCACTGACCCTCCAGCAGAGGAGCCTCTGTCC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp GATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACTCATGGGCCCAGATGTaGGTGGATTTCCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: DLPLRMQVVEPLQCLSADSWAQM*VDFPES
Trigger: ACTCTCAGGGAAATCCACGCACATCTGGGCCCATGA...GTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp AGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTGCGCACCACACGACACTaGAAGCAGCCTTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RMQVVEPLQCLSADVGNLRTTRH*KQPLVS
Trigger: TGACACCAAAGGCTGCTTGCAGTGTCGTGTGGTGCG...CAGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp TCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATGTTGACAATCCTCACACAGAGCAGCAGAAACTTCTaGAGCGGCTCATACCACTGC +
Preference number: 4 (lower is better)
Translates to: SGASVAVGSPCMLTILTQSSRNF*SGSYHC
Trigger: GCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCT...CTGTGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGCCACACTGGCACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp ACACTGTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCATCCACCTGGATCACCTaGTGGGCCGAGCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: TLSCRHTTVSMGKSKVSSSTWIT*WAEPGI
Trigger: GATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGA...TGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGACAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp CTGGGTCACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAGCCGTGGGCTCGCCCTaGATGTTGACAATCCTCACA +
Preference number: 4 (lower is better)
Translates to: LGHLIGIQASALHPMAPEAVGSP*MLTILT
Trigger: TGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGC...TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTGACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp CCTTGGGAGTCTGGTAGACGGACACAGGCTAGCCTTCCCATCCAATCTGATGATCCCTGGTCCAGTTATTaGAGAGGCGTCGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PWESGRRTQASLPIQSDDPWSSY*RGVGGS
Trigger: GGAGCCCCCGACGCCTCTGCAATAACTGGACCAGGG...ATCATCAGATTGGATGGGAAGGCTAGCCTGTGTCCGTCTACCAGACTCCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp AAGTGGTGGAAATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGGAAACCCTGGGGGCCCTaGCCTTCTGTGGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: KWWKFWVQRVLSLSLGGWKPWGP*PSVVPT
Trigger: TGTGGGCACCACAGAAGGGCAGGGCCCCCAGGGTTT...CCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATTTCCACCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR GCA 90 bp CCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTTGACTTTCACCAGGATAGTTCTGAGCAAGGATaGAGGGGAAGGCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: PPPSRSTHHGAPLDFHQDSSEQG*RGRHSA
Trigger: GGCACTGTGCCTTCCCCTGCATCCTTGCTCAGAACT...ATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGCTCCTGGGCTGCAGCTaGCCAAAGGCTCCAGTCAAG +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARLLGCS*PKAPVK
Trigger: CTTGACTGGAGCCTTTGGGCAGCTGCAGCCCAGGAG...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGCCCCAATTTGGAAGGTaGCCCTCACCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARPQFGR*PSPSLG
Trigger: CCCCAAGGAGGGTGAGGGGCACCTTCCAAATTGGGG...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GGCCATGGCCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGTGGGTTCAAGTGATCTaGCTGCCTCAGTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GHGLLSPLPGFSKTLGALWVQVI*LPQFPK
Trigger: TTTGGGAAACTGAGGCAGGCAGATCACTTGAACCCA...CAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGGCCATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTGCCACCACATTGGGGTaGCGGCACTCACGCAGGATG +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLATTLG*RHSRRM
Trigger: CATCCTGCGTGAGTGCCGCCACCCCAATGTGGTGGC...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGTCTTATCTCTCAGTTTaGGCGGCTGGAAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLSYLSV*AAGSCS
Trigger: AGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGA...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GGGGAAATCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATTCTTATCTCTCAGTTTaGGCGGCTGGAAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GEIKGQLRCQCGRGLALHSYLSV*AAGSCS
Trigger: AGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGA...ATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGAAGTGGTGGAAATTCTaGGTCCAGCGAGTCTTATCT +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLKWWKF*VQRVLS
Trigger: AGATAAGACTCGCTGGACCCAGAATTTCCACCACTT...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAAGTGGTGGAAATTCTaGGTCCAGCGAGTCTTATCT +
Preference number: 4 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACKWWKF*VQRVLS
Trigger: AGATAAGACTCGCTGGACCCAGAATTTCCACCACTT...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CAGGATGACCTCTCAGGATCCTCCCGCTGCTTCATGGTGGCCCAGGCCGTGGGCGGAGTGAATGGTGTCTaGAAACATGTCATAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QDDLSGSSRCFMVAQAVGGVNGV*KHVIGL
Trigger: GAGACCTATGACATGTTTCCAGACACCATTCACTCC...GCCCACGGCCTGGGCCACCATGAAGCAGCGGGAGGATCCTGAGAGGTCATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGGGAGTGAATGGTGTCTaGAAACATGTCATAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLGVNGV*KHVIGL
Trigger: GAGACCTATGACATGTTTCCAGACACCATTCACTCC...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTTGACTTTCACCAGGATTCCCATGGTATCGTCTaGGGAGTCCAGCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PPPSRSTHHGAPLDFHQDSHGIV*GVQLLE
Trigger: TTCCAGGAGCTGGACTCCCCAGACGATACCATGGGA...ATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTCTGCTGGAGGGTCAGTaGGGAGTGGCCCTAGGAACG +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPLLEGQ*GVALGT
Trigger: CGTTCCTAGGGCCACTCCCCACTGACCCTCCAGCAG...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CCACAAGCGGTCATTCCTGAGGTAGCTGCCAATGTAGGCCACCACATTGGGGTGCTGCTCAAACAGGCCTaGGAGGTCATGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: PQAVIPEVAANVGHHIGVLLKQA*EVMGPD
Trigger: ATCTGGGCCCATGACCTCCCAGGCCTGTTTGAGCAG...CACCCCAATGTGGTGGCCTACATTGGCAGCTACCTCAGGAATGACCGCTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACTGTCAGGAATCTTGGTaGACAGAGCAAAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: DLPLRMQVVEPLQCLSADCQESW*TEQSAW
Trigger: CCAGGCGCTTTGCTCTGTCCACCAAGATTCCTGACA...GTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp ACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCTGGCGGCCAGCAGGAAGGTaGCACCCGTGTAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: TILTQRSKLTRIVSLSTWRPAGR*HPCRGS
Trigger: GGAACCCCTACACGGGTGCCACCTTCCTGCTGGCCG...CCAGGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AAAGTGGTGGAAATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGTCCAGGGGCAGGACATaGAACAGGACGCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: KVVEILGPASLISQFGRLSRGRT*NRTRQP
Trigger: CGGCTGCCGCGTCCTGTTCCATGTCCTGCCCCTGGA...CAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATTTCCACCACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGACACCACAGTCTCGATaGGGAAATCAAAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGTPQSR*GNQRSA
Trigger: AGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGT...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTTGACTTTCACCAGGATTCCTCTGGTCTAGGATaGGCCCCTTTGCCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: PPPSRSTHHGAPLDFHQDSSGLG*APLPKR
Trigger: CCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGA...ATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp TCCACTCTTCCTCCCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGTCCTCTGGTCTAGGATaGGCCCCTTTGCCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: STLPPTAHSVGQFPSCVGSSGLG*APLPKR
Trigger: CCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGA...CCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGGGAGGAAGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CCA 90 bp AAACCTAAGGAAAGTAAAGCTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGGGCCCTGCCCTTCTGTaGTGCCCACAGAAACGTGTG +
Preference number: 4 (lower is better)
Translates to: KPKESKAQRAGVAHPVQGGPALL*CPQKRV
Trigger: CACACGTTTCTGTGGGCACCACAGAAGGGCAGGGCC...CCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAGCTTTACTTTCCTTAGGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGGAAGCTGCTCTTCGACATGGGCCCTGCCCTTCTGTaGTGCCCACAGAAACGTGTG +
Preference number: 4 (lower is better)
Translates to: VQRVLSLSLGGWKLLFDMGPALL*CPQKRV
Trigger: CACACGTTTCTGTGGGCACCACAGAAGGGCAGGGCC...CATGTCGAAGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCTTCTCCAAAACCCTaGGGGCCCTGCCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARASPKP*GPCPSV
Trigger: CACAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGC...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GGTGCTAAACTACAGCAGAGCCCTCAAACTGCAAAGCTGAGGGTCAGTTCTGAGGAGGATGCCCAGCCCTaGGGGCCCTGGCATTCAGAG +
Preference number: 4 (lower is better)
Translates to: GAKLQQSPQTAKLRVSSEEDAQP*GPWHSE
Trigger: CTCTGAATGCCAGGGCCCCCAGGGCTGGGCATCCTC...CTCAGAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGCTGTAGTTTAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGCCCTTCTGAGCACAGTTGTTACTTaGGGATGGGAGGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: PPVTSTWLLQNPGGPALLSTVVT*GWEARS
Trigger: GCTTCTTGCCTCCCATCCCCAAGTAACAACTGTGCT...CAGAAGGGCAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 72 bp CCCACCAGGTGCAAAGGTCTTCCTCCAACACCTGCCTaGAATGTAGGGGTGACCATGGGGCCTTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PTRCKGLPPTPA*NVGVTMGPLLQ
Trigger: CTGGAGCAAAGGCCCCATGGTCACCCCTACATTCAAGGCAGGTGTTGGAGGAAGACCTTTGCACCTGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 72 bp TCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATGTaGACAATCCTCACACAGCGTTCAAAGCTGACTAGG +
Preference number: 4 (lower is better)
Translates to: SGASVAVGSPCM*TILTQRSKLTR
Trigger: CCTAGTCAGCTTTGAACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGCCACACTGGCACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp ATGCATGCAACAGGGATGACTCGCAAATCCTTATGCTCAGCTAAGCAAGAAGCCCGGCCAGTTCGGACGTaGCCGTGTCGCGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: MHATGMTRKSLCSAKQEARPVRT*PCRGPC
Trigger: ACAAGGCCCGCGACACGGTCACGTCCGAACTGGCCG...GGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGACTCACGCAGGATGGTaGTTTCCTGCTGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLTHAGW*FPAGGS
Trigger: GCTCCCTCCAGCAGGAAATCACCATCCTGCGTGAGT...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000377350.7
CDS-3UTR TCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGACTCACGCAGGATGGTaGTTTCCTGCTGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARTHAGW*FPAGGS
Trigger: GCTCCCTCCAGCAGGAAATCACCATCCTGCGTGAGT...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000377350.7
CDS-3UTR TCA 90 bp GAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTACAAGCGGTCATTCCTaGGGTAGCTGCCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: ENAGGGAPSVPLGRRRQSTSGHS*GSCQCR
Trigger: CCTACATTGGCAGCTACCTCAGGAATGACCGCTTGT...AGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433890.5
ENST00000435926.5
ENST00000444560.1
CDS-3UTR TCA 90 bp TCTGTGGATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGAAGGTTGGCTCCCTTaGTGTCTCTGTGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: SVDLPLRMQVVEPLQCLSEGWLP*CLCGSS
Trigger: GGAAGATCCACAGAGACATCAAGGGAGCCAACCTTC...CGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATCCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GGTGCTAAACTACAGCAGAGCCCTCAAACTGCAAAGCTGAGGGTCAGTTCTGAGCGCTGTCAGCTCGCCTaGCACCCCAAAGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GAKLQQSPQTAKLRVSSERCQLA*HPKVSQ
Trigger: CTGGCTGACTTTGGGGTGTCAGGCGAGCTGACAGCG...CTCAGAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGCTGTAGTTTAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR TCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGGGAGCTGCTGAGTCGTaGACGGGTGCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWGAAES*TGAAGA
Trigger: AGCTCCTGCAGCACCCGTTCACGACTCAGCAGCTCC...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTGCAGGGGGCAGCCATTaGAGACCTTGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLAGGSH*RPWRSR
Trigger: CCTGCTTCTCCAAGGTCTTCAATGGCTGCCCCCTGC...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGCAGGGGGCAGCCATTaGAGACCTTGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQAGGSH*RPWRSR
Trigger: CCTGCTTCTCCAAGGTCTTCAATGGCTGCCCCCTGC...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GTGTCCACTCTTCCTCCCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGAATGCTCTCCAGGATaGTGTCTCTGTGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: VSTLPPTAHSVGQFPSCVECSPG*CLCGPQ
Trigger: TTGGGGCCCACAGAGACATCATCCTGGAGAGCATTC...CACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGGGAGGAAGAGTGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGGAAGGAGGCGGGAGATaGGGTGGGTTCACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWEGGGR*GGFTPP
Trigger: AGGGGGAGTGAACCCACCTCATCTCCCGCCTCCTTC...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR TCA 90 bp AAACCTAAGGAAAGTAAAGCTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGGCTGAGGGTCAGTTCTaGGCAAGGATGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KPKESKAQRAGVAHPVQGAEGQF*ARMQGK
Trigger: CTTCCCCTGCATCCTTGCTCAGAACTGACCCTCAGC...CCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAGCTTTACTTTCCTTAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp GCACAAGCTACAGGAGAATGGCCATGCCCTCAAGATGCAGGCTCCAGCAAGGAGGGGTTCATAAGTAACTaGGACCAGGGTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AQATGEWPCPQDAGSSKEGFISN*DQGGWG
Trigger: TCCCCAGCCACCCTGGTCTCAGTTACTTATGAACCC...CTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGCCATTCTCCTGTAGCTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGACCTACCACCAAACCTaGGAGCTAAGATATTACCAA +
Preference number: 4 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLTYHQT*ELRYYQ
Trigger: TTGGTAATATCTTAGCTCTCAGGTTTGGTGGTAGGT...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp CCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACTTCCTGGGTCTAGCTTaGCTATCTTCACGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PRLIQWVSFLPAWGAKFHFLGLA*LSSRRP
Trigger: TGGCCGCCGTGAAGATAGTCAAGCTAGACCCAGGAA...GTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GCCCGTGAGGATGTAGAGGTTGCTGTGCGCCTCTGGGTTGTCAGTGGGAATGCTACTCACGCAGGATGGTaGTTTCCTGGGTCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: AREDVEVAVRLWVVSGNATHAGW*FPGSSL
Trigger: CAAGCTAGACCCAGGAAATCACCATCCTGCGTGAGT...AGCATTCCCACTGACAACCCAGAGGCGCACAGCAACCTCTACATCCTCACGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTTGCTGTAGCCTCCGCTaGTCAAACAGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLCCSLR*SNRPGR
Trigger: CCTCCCAGGCCTGTTTGAGCAGCGGAGGCTACAGCA...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGGAGAGGGGAACCTGTTaGTGTAGCCTCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLERGTC*CSLRCS
Trigger: TGAGCAGCGGAGGCTACAGCAACAGGTTCCCCTCTC...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTAGCGGCTCATACCACTaGAGCAGGAGCAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPSGSYH*SRSRLV
Trigger: CACCAGCCTGCTCCTGCTGCAGTGGTATGAGCCGCT...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp CACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAGGCCAGAGCAGCAGAAACTTCTaGAGCGGCTCATACCACTGC +
Preference number: 4 (lower is better)
Translates to: HLIGIQASALHPMAPEGQSSRNF*SGSYHC
Trigger: GCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCT...CTGGCCTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp ATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCATCTGTGATCTCCGCCCCAACACACACCTaGGGCAGCTCCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: MSLWAPSTRKILVSSVISAPTHT*GSSFPS
Trigger: GGATGGGAAGGAGCTGCCGCAGGTGTGTGTTGGGGC...GGAGATCACAGATGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTGCCAGCACACTGTCCTaGAGGCACACCACAGTCTCG +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLASTLS*RHTTVS
Trigger: CGAGACTGTGGTGTGCCTGCAGGACAGTGTGCTGGC...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGCCAGCACACTGTCCTaGAGGCACACCACAGTCTCG +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPASTLS*RHTTVS
Trigger: CGAGACTGTGGTGTGCCTGCAGGACAGTGTGCTGGC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp CTCTCCAGGATGATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCAGCCAGCACACTGTCCTaGAGGCACACCACAGTCTCG +
Preference number: 4 (lower is better)
Translates to: LSRMMSLWAPSTRKILVSASTLS*RHTTVS
Trigger: CGAGACTGTGGTGTGCCTGCAGGACAGTGTGCTGGC...TGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCTGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp TGTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGTCCAGGCTTCGGCCTTaGATCCCATGGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CPAGTPQSRWGNQRSAQVSRLRP*IPWLQK
Trigger: CTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGA...CACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp ACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCTGGCCCTGGTCCAGTTATTaGAGAGGCGTCGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TILTQRSKLTRIVSLSTWPWSSY*RGVGGS
Trigger: GGAGCCCCCGACGCCTCTGCAATAACTGGACCAGGG...CCAGGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGAGTCCAAGGGCAGATTaGAGGGACTCCTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQSPRAD*RDSSSP
Trigger: TGGTGAAGAGGAGTCCCTGCAATCTGCCCTTGGACT...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGCCTCCAGGGGCCCAGTaGCATGGTAAATCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARPPGAQ*HGKSPA
Trigger: TGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGG...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGGGAGCCCCCTCCGCAGAACTAAGTGGTGGAAATTCTaGGTCCAGCGAGTCTTATCT +
Preference number: 4 (lower is better)
Translates to: PGAQWHGKSPAGSPLRRTKWWKF*VQRVLS
Trigger: AGATAAGACTCGCTGGACCCAGAATTTCCACCACTT...AGTTCTGCGGAGGGGGCTCCCTGCAGGAGATTTACCATGCCACTGGGCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTTGACTTTCACCAGGATAGTTTCCTTCCTGCGTaGGGCGCCAAATTTCACCTG +
Preference number: 4 (lower is better)
Translates to: PPPSRSTHHGAPLDFHQDSFLPA*GAKFHL
Trigger: CAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACT...ATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp AAAGTGGTGGAAATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGCAGAGGCTCCTCTGCTaGAGGGTCAGTGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KVVEILGPASLISQFGRLQRLLC*RVSGEW
Trigger: CCACTCCCCACTGACCCTCCAGCAGAGGAGCCTCTG...CAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATTTCCACCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGCTGCTCAAACAGGCCTaGGAGGTCATGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARLLKQA*EVMGPD
Trigger: ATCTGGGCCCATGACCTCCCAGGCCTGTTTGAGCAG...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTCTGGGGATGATGCGCTaGGTGAGGCGGTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCLGMMR*VRRLVG
Trigger: CCCCACCAACCGCCTCACCCAGCGCATCATCCCCAG...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TTGACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCCTGGGGATGATGCGCTaGGTGAGGCGGTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LTILTQRSKLTRIVSLSTLGMMR*VRRLVG
Trigger: CCCCACCAACCGCCTCACCCAGCGCATCATCCCCAG...GGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTGGGATCCCCTCAGGTaGGATGAGGATGTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPWDPLR*DEDVGR
Trigger: ACGCCCGACATCCTCATCCCACCTGAGGGGATCCCA...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGCGTTGCTGTGCGCCTCTaGGTTGTCAGTGGGAATGCT +
Preference number: 4 (lower is better)
Translates to: VLQAHHSLDGEIKGQLRCVAVRL*VVSGNA
Trigger: AGCATTCCCACTGACAACCCAGAGGCGCACAGCAAC...GCACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp ACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCTGGGGGCCTGGGCTCCTCTaGTCTAGGATGGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TILTQRSKLTRIVSLSTWGPGLL*SRMGPF
Trigger: AAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCC...CCAGGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TCCTTCCTTATCCCATCCCACACTCCTCTCAGGGACGACCATCTCAGATTTTGTTTGGGCACTAGGGACTaGGCTGCCTCGGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SFLIPSHTPLRDDHLRFCLGTRD*AASGMG
Trigger: CCCCATCCCCGAGGCAGCCCAGTCCCTAGTGCCCAA...ACAAAATCTGAGATGGTCGTCCCTGAGAGGAGTGTGGGATGGGATAAGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTGCCCTCCCTGGGGGCTaGTCTGTTTCTGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLALPGG*SVSGSD
Trigger: GTCACTACCAGAAACAGACCAGCCCCCAGGGAGGGC...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGCAGCCCTGGGGGCCCTaGCATTCAGAGCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWQPWGP*HSELSR
Trigger: TCTGCTCAGCTCTGAATGCCAGGGCCCCCAGGGCTG...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp TGGAAATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGGAAGCTCGCGGCTGGAAGCTCATaGGGTGCAGGTGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: WKFWVQRVLSLSLGGWKLAAGSS*GAGGTE
Trigger: CTCTGTTCCACCTGCACCCCATGAGCTTCCAGCCGC...GAGCTTCCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433890.5
CDS-3UTR TCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTCCTGCTGGAGGGAGCTaGTGTCGTCCCCTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCPAGGS*CRPLGL
Trigger: TAGACCCAGGGGACGACATCAGCTCCCTCCAGCAGG...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000377350.7
CDS-3UTR TCA 90 bp GCAGCCATTGAAGACCTTGGAGAAGCAGGCGCCCATATGCACCTTGGGAGTTGGACAAGCGGTCATTCCTaGGGTAGCTGCCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: AAIEDLGEAGAHMHLGSWTSGHS*GSCQCR
Trigger: CCTACATTGGCAGCTACCTCAGGAATGACCGCTTGT...CCAACTCCCAAGGTGCATATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp TCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCTGGTGAAACTTGCTGCCCCCGGGAGTaGATGGTGTCTGGAAACATG +
Preference number: 4 (lower is better)
Translates to: SVGQFPSCVGRQISPGETCCPRE*MVSGNM
Trigger: CATGTTTCCAGACACCATTCACTCCCGGGGGCAGCA...AGTTTCACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGTCCCGAGTAACAGGGTaGATCCAGGTGACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQSRVTG*IQVTAA
Trigger: CGCTGCTGTCACCTGGATTCACCCTGTTACTCGGGA...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGCCAGGAGCAGCGATGTaGAATCAGCTTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLPGAAM*NQLLQR
Trigger: ACGCTGGAGAAGCTGATTTCACATCGCTGCTCCTGG...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGAATGCTCTCCAGGATaGTGTCTCTGTGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARECSPG*CLCGPQ
Trigger: TTGGGGCCCACAGAGACATCATCCTGGAGAGCATTC...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR TCA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGCTCAAACTGCAAAGCTaGGGGTCAGTTCTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQLKLQS*GSVLSK
Trigger: CTTGCTCAGAACTGACCCTCAGCTTTGCAGTTTGAG...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCCTGGCATTCAGAGCTaGGCAGACAGACCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLPGIQS*ADRPLE
Trigger: CTCCAAGGGTCTGTCTGCTCAGCTCTGAATGCCAGG...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GAAAGCAGCACAGTTGTTACTTGGGGATGGGAGGCAAGAAGCAGGAGGGTGGGCAGGATGGTGATTTCCTaGTGGAGGGAGCTGATGTCG +
Preference number: 4 (lower is better)
Translates to: ESSTVVTWGWEARSRRVGRMVIS*WRELMS
Trigger: CGACATCAGCTCCCTCCAGCAGGAAATCACCATCCT...GCCCACCCTCCTGCTTCTTGCCTCCCATCCCCAAGTAACAACTGTGCTGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGCATTGTAGCCACCTTTaGGCTCCACAGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARHCSHL*APQQPP
Trigger: AGGTGGCTGCTGTGGAGCGCAAAGGTGGCTACAATG...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp CTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCTGGTGCATTGTAGCCACCTTTaGGCTCCACAGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: LIQWVSFLPAWGAKFHLVHCSHL*APQQPP
Trigger: AGGTGGCTGCTGTGGAGCGCAAAGGTGGCTACAATG...CACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp ATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCATCTGTGATCTCCTGCTGTAGCCTCCGCTaGTCAAACAGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: MSLWAPSTRKILVSSVISCCSLR*SNRPGR
Trigger: CCTCCCAGGCCTGTTTGAGCAGCGGAGGCTACAGCA...GGAGATCACAGATGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGCGCACCACACGACACTaGAAGCAGCCTTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLRTTRH*KQPLVS
Trigger: TGACACCAAAGGCTGCTTGCAGTGTCGTGTGGTGCG...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAGGTGCAGCAGCAGAAACTTCTaGAGCGGCTCATACCACTGC +
Preference number: 4 (lower is better)
Translates to: VLQAHHSLDGEIKGQLRCSSRNF*SGSYHC
Trigger: GCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCT...GCACCTGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTTCCACCTGGATCACCTaGTGGGCCGAGCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCSTWIT*WAEPGI
Trigger: GATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGA...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp CCTTGGGAGTCTGGTAGACGGACACAGGCTAGCCTTCCCATCCAATCTGATGATGCCGTGGGCTCGCCCTaGATGTTGACAATCCTCACA +
Preference number: 4 (lower is better)
Translates to: PWESGRRTQASLPIQSDDAVGSP*MLTILT
Trigger: TGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGC...ATCATCAGATTGGATGGGAAGGCTAGCCTGTGTCCGTCTACCAGACTCCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GCAGATCCACAAGCGGTCATTCCTGAGGTAGCTGCCAATGTAGGCCACCACATTGCCGTGGGCTCGCCCTaGATGTTGACAATCCTCACA +
Preference number: 4 (lower is better)
Translates to: ADPQAVIPEVAANVGHHIAVGSP*MLTILT
Trigger: TGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGC...AATGTGGTGGCCTACATTGGCAGCTACCTCAGGAATGACCGCTTGTGGATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGCCTGCCCTTCTGTGGTaGCCACAGAAACGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLPALLW*PQKRVL
Trigger: CAACACACGTTTCTGTGGGCACCACAGAAGGGCAGG...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR GCA 90 bp TCCTTCCTTATCCCATCCCACACTCCTCTCAGGGACGACCATCTCAGATTTTGTTCCTGCCTCCTGGGCTaGAGCTGCCCAAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SFLIPSHTPLRDDHLRFCSCLLG*SCPKAP
Trigger: TGGAGCCTTTGGGCAGCTGCAGCCCAGGAGGCAGGA...ACAAAATCTGAGATGGTCGTCCCTGAGAGGAGTGTGGGATGGGATAAGGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGCCTACTCGCATGGCTaGCATCCACCTACCACGTCA +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQAYSHG*HPPTTS
Trigger: TGACGTGGTAGGTGGATGGCAGCCATGCGAGTAGGC...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCAAGGAGGCACTGTCTaGTGCTGGCCGGTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLQGGTV*CWPVGE
Trigger: TTCACCAACCGGCCAGCAGCAGACAGTGCCTCCTTG...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGTGTAGGCCACCACATTaGGGTGGCGGCACTCACGCA +
Preference number: 4 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWCRPPH*GGGTHA
Trigger: TGCGTGAGTGCCGCCACCCCAATGTGGTGGCCTACA...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGCCTCCAGGGGCCCAGTaGCATGGTAAATCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQPPGAQ*HGKSPA
Trigger: TGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGG...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp TCAGTGGGGAGTGGCCCTAGGAACGGGGCCCGCTTGATGGTTCCCATGGTATCGAGTTTGAGAAAGTGGTaGAAATTCTGGGTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SVGSGPRNGARLMVPMVSSLRKW*KFWVQR
Trigger: TCGCTGGACCCAGAATTTCCACCACTTTCTCAAACT...CGATACCATGGGAACCATCAAGCGGGCCCCGTTCCTAGGGCCACTCCCCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGCCAGATGAGGGTCACTaGCTTTGTCCAGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARPDEGH*LCPAAV
Trigger: CACAGCTGCTGGACAAAGCCAGTGACCCTCATCTGG...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GCAGATCCACAAGCGGTCATTCCTGAGGTAGCTGCCAATGTAGGCCACCACATTGGGGAGTCCAGCTCCTaGAATTCTGAGGCTGACCGA +
Preference number: 4 (lower is better)
Translates to: ADPQAVIPEVAANVGHHIGESSS*NSEADR
Trigger: TCGGTCAGCCTCAGAATTCCAGGAGCTGGACTCCCC...AATGTGGTGGCCTACATTGGCAGCTACCTCAGGAATGACCGCTTGTGGATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TGTGCGTGGATTTCCCTGAGAGTGACAGCAGCACGTTGTTCACGCAGTAGAGCCGGGCCCAGATGTGCGTaGATTTCCCTGAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: CAWISLRVTAARCSRSRAGPRCA*ISLRVT
Trigger: TGTCACTCTCAGGGAAATCCACGCACATCTGGGCCC...GGCTCTACTGCGTGAACAACGTGCTGCTGTCACTCTCAGGGAAATCCACGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAGGCCAGACTGCAAGCAGCCTTTaGTGTCAGGAATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: HLIGIQASALHPMAPEGQTASSL*CQESWW
Trigger: CCACCAAGATTCCTGACACCAAAGGCTGCTTGCAGT...CTGGCCTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TCCACTCTTCCTCCCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGACTGCAAGCAGCCTTTaGTGTCAGGAATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: STLPPTAHSVGQFPSCVGTASSL*CQESWW
Trigger: CCACCAAGATTCCTGACACCAAAGGCTGCTTGCAGT...CCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGGGAGGAAGAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp ATGCATGCAACAGGGATGACTCGCAAATCCTTATGCTCAGCTAAGCAAGAAGCCCGGCCAGCAGGAAGGTaGCACCCGTGTAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: MHATGMTRKSLCSAKQEARPAGR*HPCRGS
Trigger: GGAACCCCTACACGGGTGCCACCTTCCTGCTGGCCG...GGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGGCTGGGCAGAGGGCTaGAGAAGTTCTTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPGWAEG*RSSSAA
Trigger: TGCTGCTGAAGAACTTCTCCAGCCCTCTGCCCAGCC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GCAGATCCACAAGCGGTCATTCCTGAGGTAGCTGCCAATGTAGGCCACCACATTGGCTGGGCAGAGGGCTaGAGAAGTTCTTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ADPQAVIPEVAANVGHHIGWAEG*RSSSAA
Trigger: TGCTGCTGAAGAACTTCTCCAGCCCTCTGCCCAGCC...AATGTGGTGGCCTACATTGGCAGCTACCTCAGGAATGACCGCTTGTGGATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp ATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCATCTGTGATCTCCCGGCCTTGCATCCCATaGCTCCAGAAGGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: MSLWAPSTRKILVSSVISRPCIP*LQKAST
Trigger: TGTGCTGGCCTTCTGGAGCCATGGGATGCAAGGCCG...GGAGATCACAGATGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AAACCTAAGGAAAGTAAAGCTCAGCGAGCTGGGGTGGCTCACCCAGTCCAAGGGGTTGCTGTGCGCCTCTaGGTTGTCAGTGGGAATGCT +
Preference number: 4 (lower is better)
Translates to: KPKESKAQRAGVAHPVQGVAVRL*VVSGNA
Trigger: AGCATTCCCACTGACAACCCAGAGGCGCACAGCAAC...CCCTTGGACTGGGTGAGCCACCCCAGCTCGCTGAGCTTTACTTTCCTTAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GGTGCTAAACTACAGCAGAGCCCTCAAACTGCAAAGCTGAGGGTCAGTTCTGAGAGGCGGGAGATGAGGTaGGTTCACTCCCCCTACCCA +
Preference number: 4 (lower is better)
Translates to: GAKLQQSPQTAKLRVSSERREMR*VHSPYP
Trigger: TGGGTAGGGGGAGTGAACCCACCTCATCTCCCGCCT...CTCAGAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGCTGTAGTTTAGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGGGGCAAGGGTGCCCTaGATGAGAGTCCCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPGARVP*MRVPLL
Trigger: CAACAAAGGGACTCTCATCCAGGGCACCCTTGCCCC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGCGGCTGATCAGTGCCTaGGGCAAAAGAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQRLISA*GKRGCP
Trigger: TGGGCATCCTCTTTTGCCCCAGGCACTGATCAGCCG...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GGCCATGGCCTCCTGTCACCTCTACCTGGCTTCTCCAAAACCCTGGGGGCCCTGGTTCACAACGGAACATaGTCCAAATGTCCATCAACA +
Preference number: 4 (lower is better)
Translates to: GHGLLSPLPGFSKTLGALVHNGT*SKCPST
Trigger: TGTTGATGGACATTTGGACCATGTTCCGTTGTGAAC...CAGGGCCCCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGGAGGCCATGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp ACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCTGGCTCAGTTTGGGCGGCTaGAAGCTCATGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TILTQRSKLTRIVSLSTWLSLGG*KLMGCR
Trigger: CCTGCACCCCATGAGCTTCCAGCCGCCCAAACTGAG...CCAGGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433890.5
CDS-3UTR CCA 90 bp GCCCGTGAGGATGTAGAGGTTGCTGTGCGCCTCTGGGTTGTCAGTGGGAATGCTTCTTATCTCTCAGTTTaGGCGGCTGGAAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: AREDVEVAVRLWVVSGNASYLSV*AAGSSW
Trigger: CCATGAGCTTCCAGCCGCCCAAACTGAGAGATAAGA...AGCATTCCCACTGACAACCCAGAGGCGCACAGCAACCTCTACATCCTCACGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433890.5
3UTR CAA 72 bp TGGAAATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTaGGGCGGCTGGAAGCTCATGGGGTGCAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: WKFWVQRVLSLS*GGWKLMGCRWN
Trigger: GTTCCACCTGCACCCCATGAGCTTCCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433890.5
CDS-3UTR TCA 90 bp CTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCTGGTGACAAGCGGTCATTCCTaGGGTAGCTGCCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: LIQWVSFLPAWGAKFHLVTSGHS*GSCQCR
Trigger: CCTACATTGGCAGCTACCTCAGGAATGACCGCTTGT...CACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGGAAGGTTGGCTCCCTTaGTGTCTCTGTGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLEGWLP*CLCGSS
Trigger: GGAAGATCCACAGAGACATCAAGGGAGCCAACCTTC...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp TCCTTCCTTATCCCATCCCACACTCCTCTCAGGGACGACCATCTCAGATTTTGTCAGGGTGAATCCAGGTaGCAGCAGCGTGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: SFLIPSHTPLRDDHLRFCQGESR*QQRGSA
Trigger: TGCGGATCCACGCTGCTGTCACCTGGATTCACCCTG...ACAAAATCTGAGATGGTCGTCCCTGAGAGGAGTGTGGGATGGGATAAGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGCCAGGAGCAGCGATGTaGAATCAGCTTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQPGAAM*NQLLQR
Trigger: ACGCTGGAGAAGCTGATTTCACATCGCTGCTCCTGG...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTGAATGCTCTCCAGGATaGTGTCTCTGTGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLECSPG*CLCGPQ
Trigger: TTGGGGCCCACAGAGACATCATCCTGGAGAGCATTC...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR TCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGTGCTCTGGTGGCCCGTaGGGATGTAGAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWCSGGP*GCRGCC
Trigger: ACAGCAACCTCTACATCCTCACGGGCCACCAGAGCA...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR TCA 90 bp AAAGTGGTGGAAATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGTGCTCTGGTGGCCCGTaGGGATGTAGAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KVVEILGPASLISQFGRLCSGGP*GCRGCC
Trigger: ACAGCAACCTCTACATCCTCACGGGCCACCAGAGCA...CAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATTTCCACCACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GGTGCTAAACTACAGCAGAGCCCTCAAACTGCAAAGCTGAGGGTCAGTTCTGAGGCTGAGGGTCAGTTCTaGGCAAGGATGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GAKLQQSPQTAKLRVSSEAEGQF*ARMQGK
Trigger: CTTCCCCTGCATCCTTGCTCAGAACTGACCCTCAGC...CTCAGAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGCTGTAGTTTAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR TCA 90 bp CCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCTCAAACTGCAAAGCTaGGGGTCAGTTCTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: PRLIQWVSFLPAWGAKFHLKLQS*GSVLSK
Trigger: CTTGCTCAGAACTGACCCTCAGCTTTGCAGTTTGAG...GTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR TCA 90 bp GAAAGCAGCACAGTTGTTACTTGGGGATGGGAGGCAAGAAGCAGGAGGGTGGGCGATCGTGCTGTCATCTaGTGTTCCTGGTCTAACACC +
Preference number: 4 (lower is better)
Translates to: ESSTVVTWGWEARSRRVGDRAVI*CSWSNT
Trigger: GGTGTTAGACCAGGAACATCAGATGACAGCACGATC...GCCCACCCTCCTGCTTCTTGCCTCCCATCCCCAAGTAACAACTGTGCTGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp TTTAAAAATTCCTGGGCTCCTTCCTTATCCCATCCCACACTCCTCTCAGGGACGCTCGTGAGGGTCTCCTaGGCACTGGTAGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FKNSWAPSLSHPTLLSGTLVRVS*ALVVSR
Trigger: CCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAG...CGTCCCTGAGAGGAGTGTGGGATGGGATAAGGAAGGAGCCCAGGAATTTTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGAGGATGGTGATTTCCTaGTGGAGGGAGCTGATGTCG +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARRMVIS*WRELMS
Trigger: CGACATCAGCTCCCTCCAGCAGGAAATCACCATCCT...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000377350.7
CDS-3UTR GCA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGTCCAGCGTATCCTCATaGAGTTCATGCAGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQSSVSS*SSCRLS
Trigger: ACTCAACCTGCATGAACTGCATGAGGATACGCTGGA...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGTCATGGGCCCAGATGTaGGTGGATTTCCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLSWAQM*VDFPES
Trigger: ACTCTCAGGGAAATCCACGCACATCTGGGCCCATGA...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTTGCTGTAGCCTCCGCTaGTCAAACAGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCCCSLR*SNRPGR
Trigger: CCTCCCAGGCCTGTTTGAGCAGCGGAGGCTACAGCA...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCGCACCACACGACACTaGAAGCAGCCTTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLRTTRH*KQPLVS
Trigger: TGACACCAAAGGCTGCTTGCAGTGTCGTGTGGTGCG...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGGCCGTGGGCTCGCCCTaGATGTTGACAATCCTCACA +
Preference number: 4 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWAVGSP*MLTILT
Trigger: TGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGC...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGTTTCCCAGGACAAATaGAGGGGCAGGCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPVSQDK*RGRLLA
Trigger: TGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGAAAC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GAAAGCAGCACAGTTGTTACTTGGGGATGGGAGGCAAGAAGCAGGAGGGTGGGCCTCTTGGCCTGCCTTTaGTGGCAGCAAGCGTTTTAT +
Preference number: 4 (lower is better)
Translates to: ESSTVVTWGWEARSRRVGLLACL*WQQAFY
Trigger: ATAAAACGCTTGCTGCCAGCAAAGGCAGGCCAAGAG...GCCCACCCTCCTGCTTCTTGCCTCCCATCCCCAAGTAACAACTGTGCTGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCTCAGTTTGGGCGGCTaGAAGCTGCTCTTCGACATG +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLLSLGG*KLLFDM
Trigger: CATGTCGAAGAGCAGCTTCCAGCCGCCCAAACTGAG...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTCTCAGTTTGGGCGGCTaGAAGCTGCTCTTCGACATG +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPLSLGG*KLLFDM
Trigger: CATGTCGAAGAGCAGCTTCCAGCCGCCCAAACTGAG...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GCCAGTGTGGCCGTGGGCTCGCCCTGCATGTTGACAATCCTCACACAGCGTTCAAGTTTGAGAAAGTGGTaGAAATTCTGGGTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: ASVAVGSPCMLTILTQRSSLRKW*KFWVQR
Trigger: TCGCTGGACCCAGAATTTCCACCACTTTCTCAAACT...TGAACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCCCACGGCCACACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GCCCCCTCCGCAGAACTCCATGCAGATCCACAAGCGGTCATTCCTGAGGTAGCTGCCAGTTTGAGAAAGTaGTGGAAATTCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: APSAELHADPQAVIPEVAASLRK*WKFWVQ
Trigger: CTGGACCCAGAATTTCCACCACTTTCTCAAACTGGC...AGCTACCTCAGGAATGACCGCTTGTGGATCTGCATGGAGTTCTGCGGAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGCCAGATGAGGGTCACTaGCTTTGTCCAGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQPDEGH*LCPAAV
Trigger: CACAGCTGCTGGACAAAGCCAGTGACCCTCATCTGG...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CTCTCCAGGATGATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCACCAGATGAGGGTCACTaGCTTTGTCCAGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LSRMMSLWAPSTRKILVSPDEGH*LCPAAV
Trigger: CACAGCTGCTGGACAAAGCCAGTGACCCTCATCTGG...TGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCTGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GCAGCACGTTGTTCACGCAGTAGAGCCAGGAGCAGCGATGTGAAATCAGCTTCTCCACGGCTCATTCAGTaGGTCAGTTTCCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: AARCSRSRARSSDVKSASPRLIQ*VSFLPA
Trigger: CGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG...AGAAGCTGATTTCACATCGCTGCTCCTGGCTCTACTGCGTGAACAACGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CTCTCCAGGATGATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCATCCCATGGTATCGTCTaGGGAGTCCAGCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LSRMMSLWAPSTRKILVSSHGIV*GVQLLE
Trigger: TTCCAGGAGCTGGACTCCCCAGACGATACCATGGGA...TGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCTGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCTCTTCTTAGGATTCTTGGTCAGGGCCAGTTTGAGAAAGTGGTGGAAATTCTGCAGGTGACAGCAGCGTaGATCCGCAGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PLLRILGQGQFEKVVEILQVTAA*IRRGQP
Trigger: TGGCTGCCCCCTGCGGATCCACGCTGCTGTCACCTG...CAGAATTTCCACCACTTTCTCAAACTGGCCCTGACCAAGAATCCTAAGAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTGGGCCCAGATGTGCGTaGATTTCCCTGAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLGPRCA*ISLRVT
Trigger: TGTCACTCTCAGGGAAATCCACGCACATCTGGGCCC...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGTGTCAGGAATCTTGGTaGACAGAGCAAAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLCQESW*TEQSAW
Trigger: CCAGGCGCTTTGCTCTGTCCACCAAGATTCCTGACA...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TCCACTCTTCCTCCCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGACACCACAGTCTCGATaGGGAAATCAAAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: STLPPTAHSVGQFPSCVGTPQSR*GNQRSA
Trigger: AGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGT...CCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGGGAGGAAGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TTGACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCCGGCCTTGCATCCCATaGCTCCAGAAGGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: LTILTQRSKLTRIVSLSTRPCIP*LQKAST
Trigger: TGTGCTGGCCTTCTGGAGCCATGGGATGCAAGGCCG...GGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CTCTCCAGGATGATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCACCTGGGTCACCTCATTaGTATCCAGGCTTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LSRMMSLWAPSTRKILVSPGSPH*YPGFGL
Trigger: AAGGCCGAAGCCTGGATACCAATGAGGTGACCCAGG...TGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCTGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCTTGGGAGTCTGGTAGACGGACACAGGCTAGCCTTCCCATCCAATCTGATGATAGGATGATGTCTCTGTaGGCCCCAAGCACTCGGAAG +
Preference number: 4 (lower is better)
Translates to: PWESGRRTQASLPIQSDDRMMSL*APSTRK
Trigger: CTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCT...ATCATCAGATTGGATGGGAAGGCTAGCCTGTGTCCGTCTACCAGACTCCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp ACACTGTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCAAGGATGATGTCTCTGTaGGCCCCAAGCACTCGGAAG +
Preference number: 4 (lower is better)
Translates to: TLSCRHTTVSMGKSKVSSRMMSL*APSTRK
Trigger: CTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCT...TGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGACAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCCTCTGGTCTAGGATaGGCCCCTTTGCCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPSSGLG*APLPKR
Trigger: CCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGA...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCTTGGGAGTCTGGTAGACGGACACAGGCTAGCCTTCCCATCCAATCTGATGATCCTGTCACCTCTACCTaGCTTCTCCAAAACCCTGGG +
Preference number: 4 (lower is better)
Translates to: PWESGRRTQASLPIQSDDPVTST*LLQNPG
Trigger: CCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGG...ATCATCAGATTGGATGGGAAGGCTAGCCTGTGTCCGTCTACCAGACTCCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GCCCCCTCCGCAGAACTCCATGCAGATCCACAAGCGGTCATTCCTGAGGTAGCTATCTGCATGAGTCCTTaGGGTGCTAAACTACAGCAG +
Preference number: 4 (lower is better)
Translates to: APSAELHADPQAVIPEVAICMSP*GAKLQQ
Trigger: CTGCTGTAGTTTAGCACCCCAAGGACTCATGCAGAT...AGCTACCTCAGGAATGACCGCTTGTGGATCTGCATGGAGTTCTGCGGAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CCA 90 bp TTTAAAAATTCCTGGGCTCCTTCCTTATCCCATCCCACACTCCTCTCAGGGACGCAGCCTCCATGGGAATaGAGGGAACAGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FKNSWAPSLSHPTLLSGTQPPWE*REQPSG
Trigger: CCCAGAGGGCTGTTCCCTCCATTCCCATGGAGGCTG...CGTCCCTGAGAGGAGTGTGGGATGGGATAAGGAAGGAGCCCAGGAATTTTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CCTTGGGAGTCTGGTAGACGGACACAGGCTAGCCTTCCCATCCAATCTGATGATGACAGTGTGACACCCTaGGAACCACTGAGCCTACTC +
Preference number: 4 (lower is better)
Translates to: PWESGRRTQASLPIQSDDDSVTP*EPLSLL
Trigger: GAGTAGGCTCAGTGGTTCCCAGGGTGTCACACTGTC...ATCATCAGATTGGATGGGAAGGCTAGCCTGTGTCCGTCTACCAGACTCCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGGGAGGCCCCCACTTTaGCAGTTTACACTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPGRPPL*QFTLCS
Trigger: ACTGCAGAGTGTAAACTGCCAAAGTGGGGGCCTCCC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGTTGGCCTGCCTTTGCTaGCAGCAAGCGTTTTATGGG +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLLACLC*QQAFYG
Trigger: CCCATAAAACGCTTGCTGCCAGCAAAGGCAGGCCAA...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 72 bp TGCCATCCACCTACCACGTCACTCCGCAAGTCTTTATaGCCACCCACCAGGTGCAAAGGTCTTCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: CHPPTTSLRKSL*PPTRCKGLPPT
Trigger: TGTTGGAGGAAGACCTTTGCACCTGGTGGGTGGCAATAAAGACTTGCGGAGTGACGTGGTAGGTGGATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTACAAGCGGTCATTCCTaGGGTAGCTGCCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPTSGHS*GSCQCR
Trigger: CCTACATTGGCAGCTACCTCAGGAATGACCGCTTGT...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp ACACTGTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCACCAAATTTCACCTGGTaGAACTGGATCTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: TLSCRHTTVSMGKSKVSSPNFTW*NWISEG
Trigger: CCCCTCGGAGATCCAGTTTCACCAGGTGAAATTTGG...TGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGACAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCAGTTCATGCAGGTTaGGTGTGTAGATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARAVHAG*VCRCLP
Trigger: AGGAAGGCATCTACACACTCAACCTGCATGAACTGC...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp CAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCTGGTGAAACTGGCAGTTCATGCAGGTTaGGTGTGTAGATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QWVSFLPAWGAKFHLVKLAVHAG*VCRCLP
Trigger: AGGAAGGCATCTACACACTCAACCTGCATGAACTGC...CAGTTTCACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp GTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGGAAGCTGCTCTTCGACATGGCAGTTCATGCAGGTTaGGTGTGTAGATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VQRVLSLSLGGWKLLFDMAVHAG*VCRCLP
Trigger: AGGAAGGCATCTACACACTCAACCTGCATGAACTGC...CATGTCGAAGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR TCA 90 bp GGTGCTAAACTACAGCAGAGCCCTCAAACTGCAAAGCTGAGGGTCAGTTCTGAGCCAGGAGCAGCGATGTaGAATCAGCTTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GAKLQQSPQTAKLRVSSEPGAAM*NQLLQR
Trigger: ACGCTGGAGAAGCTGATTTCACATCGCTGCTCCTGG...CTCAGAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGCTGTAGTTTAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR TCA 90 bp TCTGGAAAATTGGAAGTTAGGAATTCACTTTGTATCCCTGTTACCACCGACCCCTCCCCTCAGGTGGGATaGGGATGTCGGGCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SGKLEVRNSLCIPVTTDPSPQVG*GCRASG
Trigger: GCCTGACGCCCGACATCCTCATCCCACCTGAGGGGA...GGGGTCGGTGGTAACAGGGATACAAAGTGAATTCCTAACTTCCAATTTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGCACAGCGTTCAAAGCTaGCTAGGATTGTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLHSVQS*LGLCPC
Trigger: ACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTG...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR TCA 90 bp ACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCTGGGCTCGCCCTGCATGTTaGCAATCCTCACACAGCGTT +
Preference number: 4 (lower is better)
Translates to: TILTQRSKLTRIVSLSTWARPAC*QSSHSV
Trigger: AACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGC...CCAGGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp AGTCTTATCTCTCAGTTTGGGCGGCTGGAAGCTGCTCTTCGACATGAGCATCAGGCTCGCCCTGCATGTTaGCAATCCTCACACAGCGTT +
Preference number: 4 (lower is better)
Translates to: SLISQFGRLEAALRHEHQARPAC*QSSHSV
Trigger: AACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGC...CTGATGCTCATGTCGAAGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR TCA 90 bp ACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCTGGTTCCTGGGTCTAGCTTaGCTATCTTCACGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: TILTQRSKLTRIVSLSTWFLGLA*LSSRRP
Trigger: TGGCCGCCGTGAAGATAGTCAAGCTAGACCCAGGAA...CCAGGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGGTCAGTTTCCTTCCTaGGTGGGGCGCCAAATTTCA +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPGQFPS*VGRQIS
Trigger: TGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp TTGACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCGAGAGGGGAACCTGTTaGTGTAGCCTCCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LTILTQRSKLTRIVSLSTERGTC*CSLRCS
Trigger: TGAGCAGCGGAGGCTACAGCAACAGGTTCCCCTCTC...GGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp CCTCTTCTTAGGATTCTTGGTCAGGGCCAGTTTGAGAAAGTGGTGGAAATTCTGGCCCCAACACACACCTaGGGCAGCTCCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: PLLRILGQGQFEKVVEILAPTHT*GSSFPS
Trigger: GGATGGGAAGGAGCTGCCGCAGGTGTGTGTTGGGGC...CAGAATTTCCACCACTTTCTCAAACTGGCCCTGACCAAGAATCCTAAGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp ATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCATCTGTGATCTCCCCTGCCCTTCTGTGGTaGCCACAGAAACGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: MSLWAPSTRKILVSSVISPALLW*PQKRVL
Trigger: CAACACACGTTTCTGTGGGCACCACAGAAGGGCAGG...GGAGATCACAGATGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTATGGTGATTTCCTGCTaGAGGGAGCTGATGTCGTCC +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLMVISC*RELMSS
Trigger: GGACGACATCAGCTCCCTCCAGCAGGAAATCACCAT...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000377350.7
CDS-3UTR CCA 90 bp CCACAAGCGGTCATTCCTGAGGTAGCTGCCAATGTAGGCCACCACATTGGGGTGGCCAGTTTGAGAAAGTaGTGGAAATTCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PQAVIPEVAANVGHHIGVASLRK*WKFWVQ
Trigger: CTGGACCCAGAATTTCCACCACTTTCTCAAACTGGC...CACCCCAATGTGGTGGCCTACATTGGCAGCTACCTCAGGAATGACCGCTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp ATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCATCTGTGATCTCCCCAGATGAGGGTCACTaGCTTTGTCCAGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: MSLWAPSTRKILVSSVISPDEGH*LCPAAV
Trigger: CACAGCTGCTGGACAAAGCCAGTGACCCTCATCTGG...GGAGATCACAGATGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTGCCCCCGGGAGTGAATaGTGTCTGGAAACATGTCAT +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLAPGSE*CLETCH
Trigger: ATGACATGTTTCCAGACACCATTCACTCCCGGGGGC...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CTCTCCAGGATGATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCAGCCCCCGGGAGTGAATaGTGTCTGGAAACATGTCAT +
Preference number: 4 (lower is better)
Translates to: LSRMMSLWAPSTRKILVSAPGSE*CLETCH
Trigger: ATGACATGTTTCCAGACACCATTCACTCCCGGGGGC...TGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTAGTTTCCTTCCTGCGTaGGGCGCCAAATTTCACCTG +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLSFLPA*GAKFHL
Trigger: CAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACT...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp TCCAGGATGATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCATCTTCCCATGGTATCGTCTaGGGAGTCCAGCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SRMMSLWAPSTRKILVSSSHGIV*GVQLLE
Trigger: TTCCAGGAGCTGGACTCCCCAGACGATACCATGGGA...AGATGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGTGTCAGGAATCTTGGTaGACAGAGCAAAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQCQESW*TEQSAW
Trigger: CCAGGCGCTTTGCTCTGTCCACCAAGATTCCTGACA...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGACTGCAAGCAGCCTTTaGTGTCAGGAATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLTASSL*CQESWW
Trigger: CCACCAAGATTCCTGACACCAAAGGCTGCTTGCAGT...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACTCATCTGTGATCTCCTaGGTCACCTCATTGGTATCC +
Preference number: 4 (lower is better)
Translates to: PRLIQWVSFLPAWGAKFHSSVIS*VTSLVS
Trigger: GGATACCAATGAGGTGACCCAGGAGATCACAGATGA...GTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp CCATCTAGGGAAACGTCCTCTTCGTTTTTGGTCTTGTCTTTCAAGCGAGTTCTAGCCCCTCACCCTCCTTaGGGCTCACGGGAACATGGG +
Preference number: 4 (lower is better)
Translates to: PSRETSSSFLVLSFKRVLAPHPP*GSREHG
Trigger: CCCATGTTCCCGTGAGCCCCAAGGAGGGTGAGGGGC...TAGAACTCGCTTGAAAGACAAGACCAAAAACGAAGAGGACGTTTCCCTAGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 72 bp GTGCATATTCCCTGGTTTCTCGGCCTTTCTTTGCTCTaGGCCTGCCTTTGCTGGCAGCAAGCGTTTTATGGG +
Preference number: 4 (lower is better)
Translates to: VHIPWFLGLSLL*ACLCWQQAFYG
Trigger: CCCATAAAACGCTTGCTGCCAGCAAAGGCAGGCCAAGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 72 bp CTCTCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTaGCTCTTGGCCTGCCTTTGCTGGCAGCAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: LSVHIPWFLGLS*LLACLCWQQAF
Trigger: AAACGCTTGCTGCCAGCAAAGGCAGGCCAAGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 72 bp TGGAAATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTaGGGCGGCTGGAAGCTGCTCTTCGACATGAGCATC +
Preference number: 4 (lower is better)
Translates to: WKFWVQRVLSLS*GGWKLLFDMSI
Trigger: GATGCTCATGTCGAAGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR TCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGACAAGCGGTCATTCCTaGGGTAGCTGCCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWTSGHS*GSCQCR
Trigger: CCTACATTGGCAGCTACCTCAGGAATGACCGCTTGT...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp GTTAGGAATTCACTTTGTATCCCTGTTACCACCGACCCCAATTTGGAAGGTGCCTGCTGCCCCCGGGAGTaGATGGTGTCTGGAAACATG +
Preference number: 4 (lower is better)
Translates to: VRNSLCIPVTTDPNLEGACCPRE*MVSGNM
Trigger: CATGTTTCCAGACACCATTCACTCCCGGGGGCAGCA...GGCACCTTCCAAATTGGGGTCGGTGGTAACAGGGATACAAAGTGAATTCCTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp TCCAGGATGATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCATCTCCAAATTTCACCTGGTaGAACTGGATCTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SRMMSLWAPSTRKILVSSPNFTW*NWISEG
Trigger: CCCCTCGGAGATCCAGTTTCACCAGGTGAAATTTGG...AGATGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGCAGTTCATGCAGGTTaGGTGTGTAGATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPAVHAG*VCRCLP
Trigger: AGGAAGGCATCTACACACTCAACCTGCATGAACTGC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp ACACTGTCCTGCAGGCACACCACAGTCTCGATGGGGAAATCAAAGGTCAGCTCACACAGCGTTCAAAGCTaGCTAGGATTGTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TLSCRHTTVSMGKSKVSSHSVQS*LGLCPC
Trigger: ACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTG...TGAGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGTGCCTGCAGGACAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp TTTAAAAATTCCTGGGCTCCTTCCTTATCCCATCCCACACTCCTCTCAGGGACGGAATGCTCTCCAGGATaGTGTCTCTGTGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: FKNSWAPSLSHPTLLSGTECSPG*CLCGPQ
Trigger: TTGGGGCCCACAGAGACATCATCCTGGAGAGCATTC...CGTCCCTGAGAGGAGTGTGGGATGGGATAAGGAAGGAGCCCAGGAATTTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp GAAAGCAGCACAGTTGTTACTTGGGGATGGGAGGCAAGAAGCAGGAGGGTGGGCTCTTCTAGAAGTGCTTaGATATGTACAGAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: ESSTVVTWGWEARSRRVGSSRSA*ICTEGH
Trigger: GTGCCCCTCTGTACATATTCAAGCACTTCTAGAAGA...GCCCACCCTCCTGCTTCTTGCCTCCCATCCCCAAGTAACAACTGTGCTGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp ACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCTGGGGTCAGTTTCCTTCCTaGGTGGGGCGCCAAATTTCA +
Preference number: 4 (lower is better)
Translates to: TILTQRSKLTRIVSLSTWGQFPS*VGRQIS
Trigger: TGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACC...CCAGGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGTCCAGCGTATCCTCATaGAGTTCATGCAGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARSSVSS*SSCRLS
Trigger: ACTCAACCTGCATGAACTGCATGAGGATACGCTGGA...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR GCA 90 bp CTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCTGGTGTCCAGCGTATCCTCATaGAGTTCATGCAGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: LIQWVSFLPAWGAKFHLVSSVSS*SSCRLS
Trigger: ACTCAACCTGCATGAACTGCATGAGGATACGCTGGA...CACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGTTTCCCAGGACAAATaGAGGGGCAGGCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCVSQDK*RGRLLA
Trigger: TGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGAAAC...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp TCCAGGATGATGTCTCTGTGGGCCCCAAGCACTCGGAAGATCCTTGTTTCATCTGCAGAGCCCTCAAACTaGAAAGCTGAGGGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: SRMMSLWAPSTRKILVSSAEPSN*KAEGQF
Trigger: GAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGC...AGATGAAACAAGGATCTTCCGAGTGCTTGGGGCCCACAGAGACATCATCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR GCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTTGGCAGTTTACACTCTaGAGTCCAAACCCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLWQFTL*SPNPVS
Trigger: GGAAACGGGGTTTGGACTGCAGAGTGTAAACTGCCA...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTTTCTCGGCCTTTCTTTaGTCTTGGCCTGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLFSAFL*SWPAFA
Trigger: AGCAAAGGCAGGCCAAGAGCAAAGAAAGGCCGAGAA...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTTTCTGTGCAGGACGCTaGAGTGATTCCGCCCCACTT +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCFCAGR*SDSAPL
Trigger: AAGTGGGGCGGAATCACTGCAGCGTCCTGCACAGAA...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGTCTTATCTCTCAGTTTaGGCGGCTGGAAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQSYLSV*AAGSCS
Trigger: AGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGA...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGAGTTTCCTTCCTGCGTaGGGCGCCAAATTTCACCTG +
Preference number: 4 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWSFLPA*GAKFHL
Trigger: CAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACT...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CCA 90 bp TCTGGAAAATTGGAAGTTAGGAATTCACTTTGTATCCCTGTTACCACCGACCCCCAGAGGCTCCTCTGCTaGAGGGTCAGTGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SGKLEVRNSLCIPVTTDPQRLLC*RVSGEW
Trigger: CCACTCCCCACTGACCCTCCAGCAGAGGAGCCTCTG...GGGGTCGGTGGTAACAGGGATACAAAGTGAATTCCTAACTTCCAATTTTCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGTGTCAGGAATCTTGGTaGACAGAGCAAAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWCQESW*TEQSAW
Trigger: CCAGGCGCTTTGCTCTGTCCACCAAGATTCCTGACA...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGTTGCTGTGCGCCTCTaGGTTGTCAGTGGGAATGCT +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCVAVRL*VVSGNA
Trigger: AGCATTCCCACTGACAACCCAGAGGCGCACAGCAAC...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTCCTGTCACCTCTACCTaGCTTCTCCAAAACCCTGGG +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCPVTST*LLQNPG
Trigger: CCCAGGGTTTTGGAGAAGCCAGGTAGAGGTGACAGG...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CCA 90 bp ATGCATGCAACAGGGATGACTCGCAAATCCTTATGCTCAGCTAAGCAAGAAGCCAACTCTGCTGGAGGGTaGCTGAGGGGACAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: MHATGMTRKSLCSAKQEANSAGG*LRGQCD
Trigger: GTCACACTGTCCCCTCAGCCACCCTCCAGCAGAGTT...GGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTCAGTTGAAACTCTGCTaGAGGGTGGCTGAGGGGACA +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCQLKLC*RVAEGT
Trigger: TGTCCCCTCAGCCACCCTCCAGCAGAGTTTCAACTG...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGATGGGTGTGAATGCCTaGTGTGAAGAGATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARMGVNA*CEEMCS
Trigger: GGAACACATCTCTTCACACCAGGCATTCACACCCAT...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGCAGCAAGCGTTTTATaGGAGGCCCCCACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCAASVL*EAPTLA
Trigger: TGCCAAAGTGGGGGCCTCCCATAAAACGCTTGCTGC...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GGTGCTAAACTACAGCAGAGCCCTCAAACTGCAAAGCTGAGGGTCAGTTCTGAGGTTGTTACTTGGGGATaGGAGGCAAGAAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GAKLQQSPQTAKLRVSSEVVTWG*EARSRR
Trigger: CCTCCTGCTTCTTGCCTCCCATCCCCAAGTAACAAC...CTCAGAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGCTGTAGTTTAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR TCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTCCAAATTTCACCTGGTaGAACTGGATCTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCPNFTW*NWISEG
Trigger: CCCCTCGGAGATCCAGTTTCACCAGGTGAAATTTGG...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR TCA 90 bp TCTGGAAAATTGGAAGTTAGGAATTCACTTTGTATCCCTGTTACCACCGACCCCGGAACGGGGCCCGCTTaGTGGTTCCCATGGTATCGT +
Preference number: 4 (lower is better)
Translates to: SGKLEVRNSLCIPVTTDPGTGPA*WFPWYR
Trigger: ACGATACCATGGGAACCATCAAGCGGGCCCCGTTCC...GGGGTCGGTGGTAACAGGGATACAAAGTGAATTCCTAACTTCCAATTTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp GTTAGGAATTCACTTTGTATCCCTGTTACCACCGACCCCAATTTGGAAGGTGCCCATTGTAGCCACCTTTaGGCTCCACAGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: VRNSLCIPVTTDPNLEGAHCSHL*APQQPP
Trigger: AGGTGGCTGCTGTGGAGCGCAAAGGTGGCTACAATG...GGCACCTTCCAAATTGGGGTCGGTGGTAACAGGGATACAAAGTGAATTCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTAGCAGCAGAAACTTCTaGAGCGGCTCATACCACTGC +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCSSRNF*SGSYHC
Trigger: GCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCT...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR GCA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGTGTTAGTCTCTCAGTaGATATTCCCTGGTTTCTCG +
Preference number: 4 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARVLVSQ*IFPGFS
Trigger: CGAGAAACCAGGGAATATGCACTGAGAGACTAACAC...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp TTTAAAAATTCCTGGGCTCCTTCCTTATCCCATCCCACACTCCTCTCAGGGACGTCACCCAGGCTGGAGTaGAGTGGCAAGTTCATAGCT +
Preference number: 4 (lower is better)
Translates to: FKNSWAPSLSHPTLLSGTSPRLE*SGKFIA
Trigger: AGCTATGAACTTGCCACTGCACTCCAGCCTGGGTGA...CGTCCCTGAGAGGAGTGTGGGATGGGATAAGGAAGGAGCCCAGGAATTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTTGTCAGGAATCTTGGTaGACAGAGCAAAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCCQESW*TEQSAW
Trigger: CCAGGCGCTTTGCTCTGTCCACCAAGATTCCTGACA...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTACACCACAGTCTCGATaGGGAAATCAAAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPTPQSR*GNQRSA
Trigger: AGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGT...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGGAAGCTCATGGACACCACAGTCTCGATaGGGAAATCAAAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: NSGSSESYLSVWAAGSSWTPQSR*GNQRSA
Trigger: AGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGT...CCATGAGCTTCCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433890.5
CDS-3UTR CCA 90 bp CCATCTAGGGAAACGTCCTCTTCGTTTTTGGTCTTGTCTTTCAAGCGAGTTCTACGGCCTTGCATCCCATaGCTCCAGAAGGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PSRETSSSFLVLSFKRVLRPCIP*LQKAST
Trigger: TGTGCTGGCCTTCTGGAGCCATGGGATGCAAGGCCG...TAGAACTCGCTTGAAAGACAAGACCAAAAACGAAGAGGACGTTTCCCTAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCATCTGTGATCTCCTaGGTCACCTCATTGGTATCC +
Preference number: 4 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPSSVIS*VTSLVS
Trigger: GGATACCAATGAGGTGACCCAGGAGATCACAGATGA...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGTCATCTGTGATCTCCTaGGTCACCTCATTGGTATCC +
Preference number: 4 (lower is better)
Translates to: RPETFLRITSDLQPQQGQSSVIS*VTSLVS
Trigger: GGATACCAATGAGGTGACCCAGGAGATCACAGATGA...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CCA 90 bp TCTGGAAAATTGGAAGTTAGGAATTCACTTTGTATCCCTGTTACCACCGACCCCAGCCTCCAGAGTAGCTaGGACTGCAGGCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SGKLEVRNSLCIPVTTDPSLQSS*DCRRVP
Trigger: TGGCACTCGCCTGCAGTCCCAGCTACTCTGGAGGCT...GGGGTCGGTGGTAACAGGGATACAAAGTGAATTCCTAACTTCCAATTTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 72 bp AGTTCTGTGCAGGACGCTGCAGTGATTCCGCCCCACTaGTTTTCACCATCTAGGGAAACGTCCTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: SSVQDAAVIPPH*FSPSRETSSSF
Trigger: AAACGAAGAGGACGTTTCCCTAGATGGTGAAAACAAGTGGGGCGGAATCACTGCAGCGTCCTGCACAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp ACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCTGGTCCAGCGTATCCTCATaGAGTTCATGCAGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: TILTQRSKLTRIVSLSTWSSVSS*SSCRLS
Trigger: ACTCAACCTGCATGAACTGCATGAGGATACGCTGGA...CCAGGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR GCA 90 bp CCATCTAGGGAAACGTCCTCTTCGTTTTTGGTCTTGTCTTTCAAGCGAGTTCTATCCAGGCTTCGGCCTTaGATCCCATGGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PSRETSSSFLVLSFKRVLSRLRP*IPWLQK
Trigger: CTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGA...TAGAACTCGCTTGAAAGACAAGACCAAAAACGAAGAGGACGTTTCCCTAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTTCCGCAAGTCTTTATTaGCACCCACCAGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SQDKCRGRLLAERVERKCSASLY*HPPGAK
Trigger: CTTTGCACCTGGTGGGTGGCAATAAAGACTTGCGGA...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GTTAGGAATTCACTTTGTATCCCTGTTACCACCGACCCCAATTTGGAAGGTGCCATGGTGATTTCCTGCTaGAGGGAGCTGATGTCGTCC +
Preference number: 4 (lower is better)
Translates to: VRNSLCIPVTTDPNLEGAMVISC*RELMSS
Trigger: GGACGACATCAGCTCCCTCCAGCAGGAAATCACCAT...GGCACCTTCCAAATTGGGGTCGGTGGTAACAGGGATACAAAGTGAATTCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp AAAGTGTTAGTCTCTCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTTGCTCTGGGGAGTCCAGCTCCTaGAATTCTGAGGCTGACCGA +
Preference number: 4 (lower is better)
Translates to: KVLVSQCIFPGFSAFLCSGESSS*NSEADR
Trigger: TCGGTCAGCCTCAGAATTCCAGGAGCTGGACTCCCC...AGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGAGAGACTAACACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp TCCTTCCTTATCCCATCCCACACTCCTCTCAGGGACGACCATCTCAGATTTTGTACTGCAAGCAGCCTTTaGTGTCAGGAATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SFLIPSHTPLRDDHLRFCTASSL*CQESWW
Trigger: CCACCAAGATTCCTGACACCAAAGGCTGCTTGCAGT...ACAAAATCTGAGATGGTCGTCCCTGAGAGGAGTGTGGGATGGGATAAGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CCTTGGGAGTCTGGTAGACGGACACAGGCTAGCCTTCCCATCCAATCTGATGATTCAGTGCATATTCCCTaGTTTCTCGGCCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: PWESGRRTQASLPIQSDDSVHIP*FLGLSL
Trigger: CAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGA...ATCATCAGATTGGATGGGAAGGCTAGCCTGTGTCCGTCTACCAGACTCCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp ATGCATGCAACAGGGATGACTCGCAAATCCTTATGCTCAGCTAAGCAAGAAGCCCAGGCTGGAGTGCAGTaGCAAGTTCATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: MHATGMTRKSLCSAKQEAQAGVQ*QVHSSL
Trigger: CAGTGAGCTATGAACTTGCCACTGCACTCCAGCCTG...GGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp GGTGCTAAACTACAGCAGAGCCCTCAAACTGCAAAGCTGAGGGTCAGTTCTGAGGCAGCAACTGCAAAGTaGCAATTCCAGAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GAKLQQSPQTAKLRVSSEAATAK*QFQSSV
Trigger: CACAGAACTCTGGAATTGCCACTTTGCAGTTGCTGC...CTCAGAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGCTGTAGTTTAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 72 bp AGGAGCTTCTCTGCTGTCGGCCTCTTCTTAGGATTCTaGGTCAGGGCCAGTTTGAGAAAGTGGTGGAAATTC +
Preference number: 4 (lower is better)
Translates to: RSFSAVGLFLGF*VRASLRKWWKF
Trigger: GAATTTCCACCACTTTCTCAAACTGGCCCTGACCAAGAATCCTAAGAAGAGGCCGACAGCAGAGAAGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR TCA 90 bp CCATCTAGGGAAACGTCCTCTTCGTTTTTGGTCTTGTCTTTCAAGCGAGTTCTATGCAGGACGCTGCAGTaGTTCCGCCCCACTTGTTTT +
Preference number: 4 (lower is better)
Translates to: PSRETSSSFLVLSFKRVLCRTLQ*FRPTCF
Trigger: AAAACAAGTGGGGCGGAATCACTGCAGCGTCCTGCA...TAGAACTCGCTTGAAAGACAAGACCAAAAACGAAGAGGACGTTTCCCTAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGATACATTCTAGAAAGTaGAGATTAACCTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQIHSRK*RLTCSD
Trigger: GTCACTACAGGTTAATCTGCACTTTCTAGAATGTAT...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp TTTAAAAATTCCTGGGCTCCTTCCTTATCCCATCCCACACTCCTCTCAGGGACGTCATCTGTGATCTCCTaGGTCACCTCATTGGTATCC +
Preference number: 4 (lower is better)
Translates to: FKNSWAPSLSHPTLLSGTSSVIS*VTSLVS
Trigger: GGATACCAATGAGGTGACCCAGGAGATCACAGATGA...CGTCCCTGAGAGGAGTGTGGGATGGGATAAGGAAGGAGCCCAGGAATTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR GCA 90 bp AAAGTGTTAGTCTCTCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTTGCTCTTTGCCACCCACCAGGTaGAAAGGTCTTCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: KVLVSQCIFPGFSAFLCSLPPTR*KGLPPT
Trigger: TGTTGGAGGAAGACCTTTGCACCTGGTGGGTGGCAA...AGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGAGAGACTAACACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CCTCTTCTTAGGATTCTTGGTCAGGGCCAGTTTGAGAAAGTGGTGGAAATTCTGACTGCAAGCAGCCTTTaGTGTCAGGAATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLLRILGQGQFEKVVEILTASSL*CQESWW
Trigger: CCACCAAGATTCCTGACACCAAAGGCTGCTTGCAGT...CAGAATTTCCACCACTTTCTCAAACTGGCCCTGACCAAGAATCCTAAGAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CCA 90 bp ATGCATGCAACAGGGATGACTCGCAAATCCTTATGCTCAGCTAAGCAAGAAGCCACACCACAGTCTCGATaGGGAAATCAAAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: MHATGMTRKSLCSAKQEATPQSR*GNQRSA
Trigger: AGCTGACCTTTGATTTCCCCATCGAGACTGTGGTGT...GGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp ATGCATGCAACAGGGATGACTCGCAAATCCTTATGCTCAGCTAAGCAAGAAGCCAAGTGGTGGAAATTCTaGGTCCAGCGAGTCTTATCT +
Preference number: 4 (lower is better)
Translates to: MHATGMTRKSLCSAKQEAKWWKF*VQRVLS
Trigger: AGATAAGACTCGCTGGACCCAGAATTTCCACCACTT...GGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 72 bp GTATTTCTGATCCTCCTGACAGCCCTGCAGTTGGCTTaGGATATGGTAAACCTAAGGAAAGTAAAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VFLILLTALQLA*DMVNLRKVKLS
Trigger: GCTGAGCTTTACTTTCCTTAGGTTTACCATATCCAAAGCCAACTGCAGGGCTGTCAGGAGGATCAGAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp TCTGGAAAATTGGAAGTTAGGAATTCACTTTGTATCCCTGTTACCACCGACCCCAGTTTGAGAAAGTGGTaGAAATTCTGGGTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SGKLEVRNSLCIPVTTDPSLRKW*KFWVQR
Trigger: TCGCTGGACCCAGAATTTCCACCACTTTCTCAAACT...GGGGTCGGTGGTAACAGGGATACAAAGTGAATTCCTAACTTCCAATTTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CCA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGAATAGGGTTGTATCTTaGGCATGTATTGCTAAACAA +
Preference number: 4 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWNRVVS*ACIAKQ
Trigger: TTGTTTAGCAATACATGCCCAAGATACAACCCTATT...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
3UTR CAA 72 bp GGGAAACTTTCCAGAGTGAAGGGGATGGTGATTATCTaGATTGTGGAAATAGCTTCACGGGTGTACACGTAT +
Preference number: 4 (lower is better)
Translates to: GKLSRVKGMVII*IVEIASRVYTY
Trigger: ATACGTGTACACCCGTGAAGCTATTTCCACAATCAAGATAATCACCATCCCCTTCACTCTGGAAAGTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTCCCCTGGGTCTAGCTaGACTATCTTCACGGCGGCC +
Preference number: 5 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRASPGSS*TIFTAA
Trigger: GGCCGCCGTGAAGATAGTCAAGCTAGACCCAGGGGA...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000377350.7
CDS-3UTR CAA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCAGGAACGGGGCCCGCTaGATGGTTCCCATGGTATCG +
Preference number: 5 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRARNGAR*MVPMVS
Trigger: CGATACCATGGGAACCATCAAGCGGGCCCCGTTCCT...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGGAACGGGGCCCGCTaGATGGTTCCCATGGTATCG +
Preference number: 5 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACRNGAR*MVPMVS
Trigger: CGATACCATGGGAACCATCAAGCGGGCCCCGTTCCT...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCGGCTCGCCCTGCATGTaGACAATCCTCACACAGCGT +
Preference number: 5 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGGSPCM*TILTQR
Trigger: ACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCC...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCTCCTGGGTCACCTCATaGGTATCCAGGCTTCGGCCT +
Preference number: 5 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGSWVTS*VSRLRP
Trigger: AGGCCGAAGCCTGGATACCAATGAGGTGACCCAGGA...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp ATTGTGTCCCTGTCCACCTGGATCACCTGCTGGGCCGAGCCTGGGATCCCCTCACCCCTGGTCCAGTTATaGCAGAGGCGTCGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: IVSLSTWITCWAEPGIPSPLVQL*QRRRGL
Trigger: GAGCCCCCGACGCCTCTGCAATAACTGGACCAGGGG...TGAGGGGATCCCAGGCTCGGCCCAGCAGGTGATCCAGGTGGACAGGGACACAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CAA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCCTTTGGTCAGGGCCTTaGCTGAGCAGGAGCTCACCT +
Preference number: 5 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRALWSGP*LSRSSP
Trigger: AGGTGAGCTCCTGCTCAGCAAAGGCCCTGACCAAAG...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp TCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCCTGCTGGGTCTAGCTaGACTATCTTCACGGCGGCC +
Preference number: 5 (lower is better)
Translates to: SVPLGRRRQSAAPPGAQWPAGSS*TIFTAA
Trigger: GGCCGCCGTGAAGATAGTCAAGCTAGACCCAGCAGG...CCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444560.1
CDS-3UTR CAA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGTCCCCTGGGTCTAGCTaGACTATCTTCACGGCGGCC +
Preference number: 5 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGSPGSS*TIFTAA
Trigger: GGCCGCCGTGAAGATAGTCAAGCTAGACCCAGGGGA...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000377350.7
CDS-3UTR CAA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCGTCTTATCTCTCAGTTaGGGCGGCTGGAAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGVLSLS*GGWKLL
Trigger: GAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGAC...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCCAGCCATTGAAGACCTaGGAGAAGCAGGCGCCCATA +
Preference number: 5 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRAQPLKT*EKQAPI
Trigger: TATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTG...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCATCCAGGCTTCGGCCTaGCATCCCATGGCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACIQASA*HPMAPE
Trigger: TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGAT...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp TCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGATCCAGGCTTCGGCCTaGCATCCCATGGCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: SVPLGRRRQSAAPPGAQWIQASA*HPMAPE
Trigger: TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGAT...CCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp CCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGATCCAGGCTTCGGCCTaGCATCCCATGGCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: PGPGLLWSRMGPFAQKGLIQASA*HPMAPE
Trigger: TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGAT...CAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCCCTCCAACACCTGCCTaGAATGTAGGGGTGACCATG +
Preference number: 5 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRAPPTPA*NVGVTM
Trigger: CATGGTCACCCCTACATTCAAGGCAGGTGTTGGAGG...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCGGCCTTTCTTTGCTCTaGGCCTGCCTTTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACGLSLL*ACLCWQ
Trigger: CTGCCAGCAAAGGCAGGCCAAGAGCAAAGAAAGGCC...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCAGAGTGAGGAGAAGGTaGGCTCCCTTGATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRARVRRR*APLMSL
Trigger: CAGAGACATCAAGGGAGCCAACCTTCTCCTCACTCT...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp GCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCAGAGTGAGGAGAAGGTaGGCTCCCTTGATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: APSVPLGRRRQSAAPPGARVRRR*APLMSL
Trigger: CAGAGACATCAAGGGAGCCAACCTTCTCCTCACTCT...GGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp CCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGGGAGCCCCCTCCGCAGAATGAAAGACCTCCTCTaGGCCACAGACGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: PPGAQWHGKSPAGSPLRRMKDLL*ATDAVS
Trigger: GCTGACAGCGTCTGTGGCCAAGAGGAGGTCTTTCAT...TCTGCGGAGGGGGCTCCCTGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCCAGCCATTGAAGACCTaGGAGAAGCAGGCGCCCATA +
Preference number: 5 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACQPLKT*EKQAPI
Trigger: TATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTG...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp GGGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCACTGCAAGCAGCCTTaGGTGTCAGGAATCTTGGTG +
Preference number: 5 (lower is better)
Translates to: GPGPGLLWSRMGPFAQKGHCKQP*VSGILV
Trigger: CACCAAGATTCCTGACACCAAAGGCTGCTTGCAGTG...GCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GATGGGGGAGTGACAGCAGCTCCCCCTGGTCCAGTTATTGCAGAGGCGTCGGGGTCCTGGGTCACCTCATaGGTATCCAGGCTTCGGCCT +
Preference number: 5 (lower is better)
Translates to: DGGVTAAPPGPVIAEASGSWVTS*VSRLRP
Trigger: AGGCCGAAGCCTGGATACCAATGAGGTGACCCAGGA...CCCCGACGCCTCTGCAATAACTGGACCAGGGGGAGCTGCTGTCACTCCCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp TGTGGATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCCTAGGATGGGCCCCTTaGCCCAAAAGGGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CGSSPENAGGGAPSVPLGLGWAP*PKRACS
Trigger: GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAG...GCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CAA 90 bp GCCATGCCCTCAAGATGCAGGCTCCAGCAAGGAGGACGCCCTCCCTGGGGGCTGCTCCGCAAGTCTTTATaGCCACCCACCAGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: AMPSRCRLQQGGRPPWGLLRKSL*PPTRCK
Trigger: TTTGCACCTGGTGGGTGGCAATAAAGACTTGCGGAG...CAGCCCCCAGGGAGGGCGTCCTCCTTGCTGGAGCCTGCATCTTGAGGGCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp GGCCAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCCAGAAAGCAGCACAGTaGTTACTTGGGGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: GQGLGSSGLGWAPLPKRAQKAAQ*LLGDGR
Trigger: CCTCCCATCCCCAAGTAACAACTGTGCTGCTTTCTG...GGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp CCTCCAGGGGCCCAGTGGCATGGTAAATCTCCTGCAGGGAGCCCCCTCCGCAGATTTCCTGGGTCTAGCTaGACTATCTTCACGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PPGAQWHGKSPAGSPLRRFPGSS*TIFTAA
Trigger: GGCCGCCGTGAAGATAGTCAAGCTAGACCCAGGAAA...TCTGCGGAGGGGGCTCCCTGCAGGAGATTTACCATGCCACTGGGCCCCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCAGCAGAGTGAGGAGAAGGTaGGCTCCCTTGATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: GLGSSGLGWAPLPKRACSRVRRR*APLMSL
Trigger: CAGAGACATCAAGGGAGCCAACCTTCTCCTCACTCT...GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp TGCCTCTCGGCAGACGTAGGCAATCTGCCGCTCCTCCAGGGGCCCAGTGGCATGCACTGCAAGCAGCCTTaGGTGTCAGGAATCTTGGTG +
Preference number: 5 (lower is better)
Translates to: CLSADVGNLPLLQGPSGMHCKQP*VSGILV
Trigger: CACCAAGATTCCTGACACCAAAGGCTGCTTGCAGTG...CATGCCACTGGGCCCCTGGAGGAGCGGCAGATTGCCTACGTCTGCCGAGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS GCA 90 bp GCCACCACATTGGGGTGGCGGCACTCACGCAGGATGGTGATTTCCTaGTGGAGGGAGCTGATGTCGTCCCCTGGGTCTAGCTTGACTATC +
Preference number: 5 (lower is better)
Translates to: ATTLGWRHSRRMVIS*WRELMSSPGSSLTI
Trigger: GATAGTCAAGCTAGACCCAGGGGACGACATCAGCTCCCTCCAGCAGGAAATCACCATCCTGCGTGAGTGCCGCCACCCCAATGTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000439069.5
ENST00000468062.5
ENST00000482314.5
CDS CCA 90 bp AGGTTGCCCTGTAACCACATCCCACTCCAATCGTACCCTCTGCAGTaGCCTGGATCCCAGCTCCAGCCTCCCTCTGTGTGGCACCTGGAA +
Preference number: 5 (lower is better)
Translates to: RLPCNHIPLQSYPLQ*PGSQLQPPSVWHLE
Trigger: TTCCAGGTGCCACACAGAGGGAGGCTGGAGCTGGGATCCAGGCCACTGCAGAGGGTACGATTGGAGTGGGATGTGGTTACAGGGCAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467689.1
CDS-3UTR CAA 90 bp GGGAAATCAAAGGTCAGCTCAGGTGCCAGTGTGGCCGTGGGCTCGCCCTGCATGGTCTTATCTCTCAGTTaGGGCGGCTGGAAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GKSKVSSGASVAVGSPCMVLSLS*GGWKLL
Trigger: GAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGAC...CATGCAGGGCGAGCCCACGGCCACACTGGCACCTGAGCTGACCTTTGATTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CAA 90 bp TCCACTCTTCCTCCCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGAGGAACGGGGCCCGCTaGATGGTTCCCATGGTATCG +
Preference number: 5 (lower is better)
Translates to: STLPPTAHSVGQFPSCVGRNGAR*MVPMVS
Trigger: CGATACCATGGGAACCATCAAGCGGGCCCCGTTCCT...CCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGGGAGGAAGAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp TCTGTGGATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGCGCAGGGGGCAGCCATaGAAGACCTTGGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SVDLPLRMQVVEPLQCLSRRGQP*KTLEKQ
Trigger: CTGCTTCTCCAAGGTCTTCAATGGCTGCCCCCTGCG...CGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATCCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GCCCGTGAGGATGTAGAGGTTGCTGTGCGCCTCTGGGTTGTCAGTGGGAATGCTCTGTGCGCCTCTGGGTaGTCAGTGGGAATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: AREDVEVAVRLWVVSGNALCASG*SVGMLS
Trigger: GGAGAGCATTCCCACTGACAACCCAGAGGCGCACAG...AGCATTCCCACTGACAACCCAGAGGCGCACAGCAACCTCTACATCCTCACGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTCCACAGAAACGTGTGTaGGAGGGAAGGAGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: ENAGGGAPSVPLGRRRQSPQKRV*EGRRRE
Trigger: CTCCCGCCTCCTTCCCTCCAACACACGTTTCTGTGG...AGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435926.5
CDS-3UTR CAA 90 bp CAGGGCCTGGGCTCCTCTGGTCTAGGATGGGCCCCTTTGCCCAAAAGGGCCTGCCTCTTCTTAGGATTCTaGGTCAGGGCCAGTTTGAGA +
Preference number: 5 (lower is better)
Translates to: QGLGSSGLGWAPLPKRACLFLGF*VRASLR
Trigger: TCTCAAACTGGCCCTGACCAAGAATCCTAAGAAGAG...GCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAGACCAGAGGAGCCCAGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp CCACAAGCGGTCATTCCTGAGGTAGCTGCCAATGTAGGCCACCACATTGGGGTGAGGAACGGGGCCCGCTaGATGGTTCCCATGGTATCG +
Preference number: 5 (lower is better)
Translates to: PQAVIPEVAANVGHHIGVRNGAR*MVPMVS
Trigger: CGATACCATGGGAACCATCAAGCGGGCCCCGTTCCT...CACCCCAATGTGGTGGCCTACATTGGCAGCTACCTCAGGAATGACCGCTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp CCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTTGACTTTCACCAGGATTCCTGGGTCACCTCATaGGTATCCAGGCTTCGGCCT +
Preference number: 5 (lower is better)
Translates to: PPPSRSTHHGAPLDFHQDSWVTS*VSRLRP
Trigger: AGGCCGAAGCCTGGATACCAATGAGGTGACCCAGGA...ATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp CACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAAGGCCAGTCCTGGGTCACCTCATaGGTATCCAGGCTTCGGCCT +
Preference number: 5 (lower is better)
Translates to: HLIGIQASALHPMAPEGQSWVTS*VSRLRP
Trigger: AGGCCGAAGCCTGGATACCAATGAGGTGACCCAGGA...CTGGCCTTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp CTGGGTCACCTCATTGGTATCCAGGCTTCGGCCTTGCATCCCATGGCTCCAGAACTGTGCGCCTCTGGGTaGTCAGTGGGAATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LGHLIGIQASALHPMAPELCASG*SVGMLS
Trigger: GGAGAGCATTCCCACTGACAACCCAGAGGCGCACAG...TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGATACCAATGAGGTGACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GCAGCCATTGAAGACCTTGGAGAAGCAGGCGCCCATATGCACCTTGGGAGTTGGCTGTGCGCCTCTGGGTaGTCAGTGGGAATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: AAIEDLGEAGAHMHLGSWLCASG*SVGMLS
Trigger: GGAGAGCATTCCCACTGACAACCCAGAGGCGCACAG...CCAACTCCCAAGGTGCATATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCCCCTGGTCCAGTTATaGCAGAGGCGTCGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLPLVQL*QRRRGL
Trigger: GAGCCCCCGACGCCTCTGCAATAACTGGACCAGGGG...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GCGGTCATTCCTGAGGTAGCTGCCAATGTAGGCCACCACATTGGGGTGGCGGCACCAAAGTCAGCCAGTTaGACATCTCCCTGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: AVIPEVAANVGHHIGVAAPKSAS*TSPWRV
Trigger: CACTCTCCAGGGAGATGTCAAACTGGCTGACTTTGG...TGCCGCCACCCCAATGTGGTGGCCTACATTGGCAGCTACCTCAGGAATGACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GCCCCCTCCGCAGAACTCCATGCAGATCCACAAGCGGTCATTCCTGAGGTAGCTCAGCCATTGAAGACCTaGGAGAAGCAGGCGCCCATA +
Preference number: 5 (lower is better)
Translates to: APSAELHADPQAVIPEVAQPLKT*EKQAPI
Trigger: TATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTG...AGCTACCTCAGGAATGACCGCTTGTGGATCTGCATGGAGTTCTGCGGAGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGCGCAGGGGGCAGCCATaGAAGACCTTGGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: GLKHFSGLLLTFSPSRARRRGQP*KTLEKQ
Trigger: CTGCTTCTCCAAGGTCTTCAATGGCTGCCCCCTGCG...CCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp TGTGGATCTTCCCCTGAGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCCACTGCAAGCAGCCTTaGGTGTCAGGAATCTTGGTG +
Preference number: 5 (lower is better)
Translates to: CGSSPENAGGGAPSVPLGHCKQP*VSGILV
Trigger: CACCAAGATTCCTGACACCAAAGGCTGCTTGCAGTG...GCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCTCAGGGGAAGATCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp CCTTGGGAGTCTGGTAGACGGACACAGGCTAGCCTTCCCATCCAATCTGATGATCTAGGATGGGCCCCTTaGCCCAAAAGGGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PWESGRRTQASLPIQSDDLGWAP*PKRACS
Trigger: GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAG...ATCATCAGATTGGATGGGAAGGCTAGCCTGTGTCCGTCTACCAGACTCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp AGAATGCAGGTGGTGGAGCCCCTTCAGTGCCTCTCGGCAGACGTAGGCAATCTGTTTCCTGGGTCTAGCTaGACTATCTTCACGGCGGCC +
Preference number: 5 (lower is better)
Translates to: RMQVVEPLQCLSADVGNLFPGSS*TIFTAA
Trigger: GGCCGCCGTGAAGATAGTCAAGCTAGACCCAGGAAA...CAGATTGCCTACGTCTGCCGAGAGGCACTGAAGGGGCTCCACCACCTGCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GAAAGCAGCACAGTTGTTACTTGGGGATGGGAGGCAAGAAGCAGGAGGGTGGGCGTCTTATCTCTCAGTTaGGGCGGCTGGAAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: ESSTVVTWGWEARSRRVGVLSLS*GGWKLL
Trigger: GAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGAC...GCCCACCCTCCTGCTTCTTGCCTCCCATCCCCAAGTAACAACTGTGCTGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp TCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCTGGTGAAACTCGCAGGGGGCAGCCATaGAAGACCTTGGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SVGQFPSCVGRQISPGETRRGQP*KTLEKQ
Trigger: CTGCTTCTCCAAGGTCTTCAATGGCTGCCCCCTGCG...AGTTTCACCAGGTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGATCCAGGCTTCGGCCTaGCATCCCATGGCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLIQASA*HPMAPE
Trigger: TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGAT...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCTGTGCGCCTCTGGGTaGTCAGTGGGAATGCTCTCC +
Preference number: 5 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLLCASG*SVGMLS
Trigger: GGAGAGCATTCCCACTGACAACCCAGAGGCGCACAG...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGCTAGGATGGGCCCCTTaGCCCAAAAGGGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWLGWAP*PKRACS
Trigger: GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAG...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp ACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCTGGCTAGGATGGGCCCCTTaGCCCAAAAGGGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TILTQRSKLTRIVSLSTWLGWAP*PKRACS
Trigger: GCTGCAGGCCCTTTTGGGCAAAGGGGCCCATCCTAG...CCAGGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp TTTAAAAATTCCTGGGCTCCTTCCTTATCCCATCCCACACTCCTCTCAGGGACGCCCCTGGTCCAGTTATaGCAGAGGCGTCGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: FKNSWAPSLSHPTLLSGTPLVQL*QRRRGL
Trigger: GAGCCCCCGACGCCTCTGCAATAACTGGACCAGGGG...CGTCCCTGAGAGGAGTGTGGGATGGGATAAGGAAGGAGCCCAGGAATTTTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp CCACGGCTCATTCAGTGGGTCAGTTTCCTTCCTGCGTGGGGCGCCAAATTTCACCCAAAGTCAGCCAGTTaGACATCTCCCTGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: PRLIQWVSFLPAWGAKFHPKSAS*TSPWRV
Trigger: CACTCTCCAGGGAGATGTCAAACTGGCTGACTTTGG...GTGAAATTTGGCGCCCCACGCAGGAAGGAAACTGACCCACTGAATGAGCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGGCTCGCCCTGCATGTaGACAATCCTCACACAGCGT +
Preference number: 5 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPGSPCM*TILTQR
Trigger: ACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTGGCTCGCCCTGCATGTaGACAATCCTCACACAGCGT +
Preference number: 5 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLGSPCM*TILTQR
Trigger: ACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCC...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp AAGTTCTTCAGCAGCAGAAACTTCTGCAGCGGCTCATACCACTGCAGCAGGAGCTCCTGGGTCACCTCATaGGTATCCAGGCTTCGGCCT +
Preference number: 5 (lower is better)
Translates to: KFFSSRNFCSGSYHCSRSSWVTS*VSRLRP
Trigger: AGGCCGAAGCCTGGATACCAATGAGGTGACCCAGGA...GCTCCTGCTGCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCTGAAGAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp ACTCGTGAGGGTCTCCTGAGCACTGGTAGTGAGCAGGTGCTGGACATGCCACAGACAGAGTCAGAACAGTaGAAACTCTGCTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: TREGLLSTGSEQVLDMPQTESEQ*KLCWRV
Trigger: CACCCTCCAGCAGAGTTTCAACTGTTCTGACTCTGT...CTGTGGCATGTCCAGCACCTGCTCACTACCAGTGCTCAGGAGACCCTCACGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp CCTTGGGAGTCTGGTAGACGGACACAGGCTAGCCTTCCCATCCAATCTGATGATTGGGAGGCCCCCACTTaGGCAGTTTACACTCTGCAG +
Preference number: 5 (lower is better)
Translates to: PWESGRRTQASLPIQSDDWEAPT*AVYTLQ
Trigger: CTGCAGAGTGTAAACTGCCAAAGTGGGGGCCTCCCA...ATCATCAGATTGGATGGGAAGGCTAGCCTGTGTCCGTCTACCAGACTCCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGATGAAAGACCTCCTCTaGGCCACAGACGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: RPETFLRITSDLQPQQGQMKDLL*ATDAVS
Trigger: GCTGACAGCGTCTGTGGCCAAGAGGAGGTCTTTCAT...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp GAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGGGCCTGCACTGCAAGCAGCCTTaGGTGTCAGGAATCTTGGTG +
Preference number: 5 (lower is better)
Translates to: ETFLRITSDLQPQQGQGLHCKQP*VSGILV
Trigger: CACCAAGATTCCTGACACCAAAGGCTGCTTGCAGTG...CAGGCCCTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp GGTGCTAAACTACAGCAGAGCCCTCAAACTGCAAAGCTGAGGGTCAGTTCTGAGGGCTCGCCCTGCATGTaGACAATCCTCACACAGCGT +
Preference number: 5 (lower is better)
Translates to: GAKLQQSPQTAKLRVSSEGSPCM*TILTQR
Trigger: ACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCC...CTCAGAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGCTGTAGTTTAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CAA 90 bp GGTGCTAAACTACAGCAGAGCCCTCAAACTGCAAAGCTGAGGGTCAGTTCTGAGATCCAGGCTTCGGCCTaGCATCCCATGGCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: GAKLQQSPQTAKLRVSSEIQASA*HPMAPE
Trigger: TTCTGGAGCCATGGGATGCAAGGCCGAAGCCTGGAT...CTCAGAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGCTGTAGTTTAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CAA 90 bp TCCTTCCTTATCCCATCCCACACTCCTCTCAGGGACGACCATCTCAGATTTTGTCCACAGAAACGTGTGTaGGAGGGAAGGAGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: SFLIPSHTPLRDDHLRFCPQKRV*EGRRRE
Trigger: CTCCCGCCTCCTTCCCTCCAACACACGTTTCTGTGG...ACAAAATCTGAGATGGTCGTCCCTGAGAGGAGTGTGGGATGGGATAAGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGCTCTTGGCCTGCCTTaGCTGGCAGCAAGCGTTTTA +
Preference number: 5 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPALGLP*LAASVL
Trigger: TAAAACGCTTGCTGCCAGCAAAGGCAGGCCAAGAGC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp GAAAGCAGCACAGTTGTTACTTGGGGATGGGAGGCAAGAAGCAGGAGGGTGGGCATCATGGTGCTCCCCTaGACTTTCACCAGGATGACT +
Preference number: 5 (lower is better)
Translates to: ESSTVVTWGWEARSRRVGIMVLP*TFTRMT
Trigger: AGTCATCCTGGTGAAAGTCAAGGGGAGCACCATGAT...GCCCACCCTCCTGCTTCTTGCCTCCCATCCCCAAGTAACAACTGTGCTGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp TGTGCGTGGATTTCCCTGAGAGTGACAGCAGCACGTTGTTCACGCAGTAGAGCCGTCTTATCTCTCAGTTaGGGCGGCTGGAAGCTCATG +
Preference number: 5 (lower is better)
Translates to: CAWISLRVTAARCSRSRAVLSLS*GGWKLM
Trigger: CATGAGCTTCCAGCCGCCCAAACTGAGAGATAAGAC...GGCTCTACTGCGTGAACAACGTGCTGCTGTCACTCTCAGGGAAATCCACGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433890.5
CDS-3UTR CAA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGCCAAAGTCAGCCAGTTaGACATCTCCCTGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: RPETFLRITSDLQPQQGQPKSAS*TSPWRV
Trigger: CACTCTCCAGGGAGATGTCAAACTGGCTGACTTTGG...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp TTGACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCGGCTCGCCCTGCATGTaGACAATCCTCACACAGCGT +
Preference number: 5 (lower is better)
Translates to: LTILTQRSKLTRIVSLSTGSPCM*TILTQR
Trigger: ACGCTGTGTGAGGATTGTCAACATGCAGGGCGAGCC...GGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424945.5
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp ATGCATGCAACAGGGATGACTCGCAAATCCTTATGCTCAGCTAAGCAAGAAGCCTCTGCTGCTGGCCGGTaGGTGAACGGAAAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: MHATGMTRKSLCSAKQEASAAGR*VNGKPV
Trigger: GACTGGCTTTCCGTTCACCAACCGGCCAGCAGCAGA...GGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp TTGACAATCCTCACACAGCGTTCAAAGCTGACTAGGATTGTGTCCCTGTCCACCATGAAAGACCTCCTCTaGGCCACAGACGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: LTILTQRSKLTRIVSLSTMKDLL*ATDAVS
Trigger: GCTGACAGCGTCTGTGGCCAAGAGGAGGTCTTTCAT...GGTGGACAGGGACACAATCCTAGTCAGCTTTGAACGCTGTGTGAGGATTGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTCAGCCATTGAAGACCTaGGAGAAGCAGGCGCCCATA +
Preference number: 5 (lower is better)
Translates to: SQDKCRGRLLAERVERKCQPLKT*EKQAPI
Trigger: TATGGGCGCCTGCTTCTCCAAGGTCTTCAATGGCTG...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp AAAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTGCCCTGCAGTTGGCTTaGGATATGGTAAACCTAAGG +
Preference number: 5 (lower is better)
Translates to: KGNVEQNGMDGPGPGSLPALQLA*DMVNLR
Trigger: CCTTAGGTTTACCATATCCAAAGCCAACTGCAGGGC...AGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp AAGGAAATGTGGAACAAAATGGAATGGATGGCCCAGGCCCAGGGTCCCTGCCTTCTGACAGCCCTGCAGTaGGCTTTGGATATGGTAAAC +
Preference number: 5 (lower is better)
Translates to: KEMWNKMEWMAQAQGPCLLTALQ*ALDMVN
Trigger: GTTTACCATATCCAAAGCCAACTGCAGGGCTGTCAG...AAGGCAGGGACCCTGGGCCTGGGCCATCCATTCCATTTTGTTCCACATTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp GAAAGCAGCACAGTTGTTACTTGGGGATGGGAGGCAAGAAGCAGGAGGGTGGGCACGTCCTCTTCGTTTTaGGTCTTGTCTTTCAAGCGA +
Preference number: 5 (lower is better)
Translates to: ESSTVVTWGWEARSRRVGTSSSF*VLSFKR
Trigger: TCGCTTGAAAGACAAGACCAAAAACGAAGAGGACGT...GCCCACCCTCCTGCTTCTTGCCTCCCATCCCCAAGTAACAACTGTGCTGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp AGGCCTGAAACATTTCTCAGGATTACTTCTGACCTTCAGCCCCAGCAGGGCCAGCTCTTCTTAGGATTCTaGGTCAGGGCCAGTTTGAGA +
Preference number: 5 (lower is better)
Translates to: RPETFLRITSDLQPQQGQLFLGF*VRASLR
Trigger: TCTCAAACTGGCCCTGACCAAGAATCCTAAGAAGAG...CTGGCCCTGCTGGGGCTGAAGGTCAGAAGTAATCCTGAGAAATGTTTCAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
CDS-3UTR CAA 90 bp AAGTGGTGGAAATTCTGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTGGCTCTTCTTAGGATTCTaGGTCAGGGCCAGTTTGAGA +
Preference number: 5 (lower is better)
Translates to: KWWKFWVQRVLSLSLGGWLFLGF*VRASLR
Trigger: TCTCAAACTGGCCCTGACCAAGAATCCTAAGAAGAG...CCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCAGAATTTCCACCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433890.5
ENST00000435926.5
CDS-3UTR CAA 90 bp AAAGTGTTAGTCTCTCAGTGCATATTCCCTGGTTTCTCGGCCTTTCTTTGCTCTCGCAGGGGGCAGCCATaGAAGACCTTGGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: KVLVSQCIFPGFSAFLCSRRGQP*KTLEKQ
Trigger: CTGCTTCTCCAAGGTCTTCAATGGCTGCCCCCTGCG...AGAGCAAAGAAAGGCCGAGAAACCAGGGAATATGCACTGAGAGACTAACACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp TCCCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTCACTGCAAGCAGCCTTaGGTGTCAGGAATCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SQDKCRGRLLAERVERKCHCKQP*VSGILV
Trigger: CACCAAGATTCCTGACACCAAAGGCTGCTTGCAGTG...ACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000424945.5
ENST00000435926.5
CDS-3UTR CAA 90 bp TCTGGAAAATTGGAAGTTAGGAATTCACTTTGTATCCCTGTTACCACCGACCCCACCACCGACCCCAATTaGGAAGGTGCCCCTCACCCT +
Preference number: 5 (lower is better)
Translates to: SGKLEVRNSLCIPVTTDPTTDPN*EGAPHP
Trigger: AGGGTGAGGGGCACCTTCCAAATTGGGGTCGGTGGT...GGGGTCGGTGGTAACAGGGATACAAAGTGAATTCCTAACTTCCAATTTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp CCTCCGCCGTCCCGAAGCACACATCATGGTGCTCCCCTTGACTTTCACCAGGATTCTTCGTTTTTGGTCTaGTCTTTCAAGCGAGTTCTA +
Preference number: 5 (lower is better)
Translates to: PPPSRSTHHGAPLDFHQDSSFLV*SFKRVL
Trigger: TAGAACTCGCTTGAAAGACAAGACCAAAAACGAAGA...ATCCTGGTGAAAGTCAAGGGGAGCACCATGATGTGTGCTTCGGGACGGCGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp CCAGGACAAATGCAGGGGCAGGCTCTTGGCAGAAAGAGTAGAAAGGAAATGTGGGTGATTCCGCCCCACTaGTTTTCACCATCTAGGGAA +
Preference number: 5 (lower is better)
Translates to: PGQMQGQALGRKSRKEMWVIPPH*FSPSRE
Trigger: TTCCCTAGATGGTGAAAACAAGTGGGGCGGAATCAC...CCACATTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp ATGCATGCAACAGGGATGACTCGCAAATCCTTATGCTCAGCTAAGCAAGAAGCCCCAAAGTCAGCCAGTTaGACATCTCCCTGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: MHATGMTRKSLCSAKQEAPKSAS*TSPWRV
Trigger: CACTCTCCAGGGAGATGTCAAACTGGCTGACTTTGG...GGCTTCTTGCTTAGCTGAGCATAAGGATTTGCGAGTCATCCCTGTTGCATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp GGTGCTAAACTACAGCAGAGCCCTCAAACTGCAAAGCTGAGGGTCAGTTCTGAGCTCTTCTTAGGATTCTaGGTCAGGGCCAGTTTGAGA +
Preference number: 5 (lower is better)
Translates to: GAKLQQSPQTAKLRVSSELFLGF*VRASLR
Trigger: TCTCAAACTGGCCCTGACCAAGAATCCTAAGAAGAG...CTCAGAACTGACCCTCAGCTTTGCAGTTTGAGGGCTCTGCTGTAGTTTAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294066.7
ENST00000435926.5
CDS-3UTR CAA 90 bp CCATCTAGGGAAACGTCCTCTTCGTTTTTGGTCTTGTCTTTCAAGCGAGTTCTACAGTCCAAGGGCAGATaGCAGGGACTCCTCTTCACC +
Preference number: 5 (lower is better)
Translates to: PSRETSSSFLVLSFKRVLQSKGR*QGLLFT
Trigger: GGTGAAGAGGAGTCCCTGCAATCTGCCCTTGGACTG...TAGAACTCGCTTGAAAGACAAGACCAAAAACGAAGAGGACGTTTCCCTAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp CCATCTAGGGAAACGTCCTCTTCGTTTTTGGTCTTGTCTTTCAAGCGAGTTCTAATGAAAGACCTCCTCTaGGCCACAGACGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: PSRETSSSFLVLSFKRVLMKDLL*ATDAVS
Trigger: GCTGACAGCGTCTGTGGCCAAGAGGAGGTCTTTCAT...TAGAACTCGCTTGAAAGACAAGACCAAAAACGAAGAGGACGTTTCCCTAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS-3UTR CAA 90 bp TCCTTCCTTATCCCATCCCACACTCCTCTCAGGGACGACCATCTCAGATTTTGTGGGATGGTGATTATCTaGATTGTGGAAATAGCTTCA +
Preference number: 5 (lower is better)
Translates to: SFLIPSHTPLRDDHLRFCGMVII*IVEIAS
Trigger: TGAAGCTATTTCCACAATCAAGATAATCACCATCCC...ACAAAATCTGAGATGGTCGTCCCTGAGAGGAGTGTGGGATGGGATAAGGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294066.7
CDS GCA 72 bp ACGCGCTGCAGCAGCTCGAAGCGGTCCCGCGGGTCCTaGAGCGACACATCCCGCAGCAGCGCCATGGCCCGG +
Preference number: 6 (lower is better)
Translates to: TRCSSSKRSRGS*SDTSRSSAMAR
Trigger: CCGGGCCATGGCGCTGCTGCGGGATGTGTCGCTGCAGGACCCGCGGGACCGCTTCGAGCTGCTGCAGCGCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000435926.5
ENST00000439069.5
ENST00000444560.1
CDS CCA 72 bp GAACGGGGCCCGCTTGATGGTTCCCATGGTATCGTCTaGGGAGTCCAGCTCCTGGTAGGAGGGGCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: ERGPLDGSHGIV*GVQLLVGGAGP
Trigger: GGGCCCTGCCCCTCCTACCAGGAGCTGGACTCCCCAGACGATACCATGGGAACCATCAAGCGGGCCCCGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467689.1
CDS CAA 90 bp CAGCTCCTGGTAGGAGGGGCAGGGCCCAGCCCGGCCGTTACCAGGTaGCCCTGTAACCACATCCCACTCCAATCGTACCCTCTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: QLLVGGAGPSPAVTR*PCNHIPLQSYPLQW
Trigger: CCACTGCAGAGGGTACGATTGGAGTGGGATGTGGTTACAGGGCAACCTGGTAACGGCCGGGCTGGGCCCTGCCCCTCCTACCAGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467689.1
CDS GCA 72 bp CCCCCACCGCCCCTCACCTTCAGCAGCAGAAACTTCTaGAGCGGCTCATACCACTGCAGCAGGAGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: PPPPLTFSSRNF*SGSYHCSRSRL
Trigger: CAGCCTGCTCCTGCTGCAGTGGTATGAGCCGCTGCAGAAGTTTCTGCTGCTGAAGGTGAGGGGCGGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470088.5
CDS CAA 72 bp GTAGGAGGGGCAGGGCCCAGCCCGGCCGTTACCAGGTaGCCCTGTAACCACATCCCACTCCAATCGTACCCT +
Preference number: 6 (lower is better)
Translates to: VGGAGPSPAVTR*PCNHIPLQSYP
Trigger: AGGGTACGATTGGAGTGGGATGTGGTTACAGGGCAACCTGGTAACGGCCGGGCTGGGCCCTGCCCCTCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467689.1
CDS GCA 72 bp TTGGGGTGGCGGCACTCACGCAGGATGGTGATTTCCTaGTGGAGGGAGCTGATGTCGTCCCCTGGGTCTAGC +
Preference number: 6 (lower is better)
Translates to: LGWRHSRRMVIS*WRELMSSPGSS
Trigger: GCTAGACCCAGGGGACGACATCAGCTCCCTCCAGCAGGAAATCACCATCCTGCGTGAGTGCCGCCACCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294066.7
ENST00000377350.7
ENST00000439069.5
ENST00000468062.5
ENST00000482314.5
CDS CCA 72 bp TGGGTCCAGCGAGTCTTATCTCTCAGTTTGGGCGGCTaGAAGCTGCTCTTCGACATGAGCATCAGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: WVQRVLSLSLGG*KLLFDMSIRAQ
Trigger: CTGGGCCCTGATGCTCATGTCGAAGAGCAGCTTCCAGCCGCCCAAACTGAGAGATAAGACTCGCTGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439069.5
ENST00000482314.5