RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP4K1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104814

Ensembl transcript IDs: ENST00000396857.7, ENST00000585583.5, ENST00000586296.5, ENST00000587300.1, ENST00000588083.5, ENST00000588938.1, ENST00000589002.5, ENST00000589130.5, ENST00000591210.1, ENST00000591517.5, ENST00000591707.1, ENST00000591921.1, ENST00000592225.1, ENST00000592888.5, ENST00000593196.1, ENST00000634236.1, ENST00000634395.1, ENST00000634456.1, ENST00000634472.1, ENST00000634475.1, ENST00000634494.2, ENST00000634660.1, ENST00000634814.1, ENST00000634864.1, ENST00000634999.1, ENST00000635132.1, ENST00000635240.1, ENST00000635246.1, ENST00000635447.1, ENST00000635583.1

Found 516 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACACCGGACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATaGTCCCAGGACCCTCGTCTGATGGAGAACGGAACTTGGGCTTGG +
Preference number: 1 (lower is better)
Translates to: HTGPAPPGSAAHHPP*SQDPRLMENGTWAW
Trigger: CCAAGCCCAAGTTCCGTTCTCCATCAGACGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGTCCGGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR TCA 90 bp TTCATTGGGAGCTGGTACCTTGCCAGTAGGCGGTGGGGGCTAATGTaGGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGTTCCAGCAGG +
Preference number: 1 (lower is better)
Translates to: FIGSWYLASRRWGLM*AMGFPALVSFRSSR
Trigger: CCTGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGCCCCCACCGCCTACTGGCAAGGTACCAGCTCCCAATGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR TCA 90 bp GATGTGTCCAGGCGGCCGTGCTGTGGATCCGGAGGGGGCAGCCATTaGACAACTTTACGAGAAGGGCACATCCCTTTCTCTTCATCTTTT +
Preference number: 1 (lower is better)
Translates to: DVSRRPCCGSGGGSH*TTLREGHIPFSSSF
Trigger: AAAAGATGAAGAGAAAGGGATGTGCCCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCCGGATCCACAGCACGGCCGCCTGGACACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp CCAGGACGGGGGCTGTTTGGTGGGGGCCCACTGGCACACCGGACCAGCACCCCCGCGAGCGGTGTTGGCTaGGGGTCTGGTCTCCATTCC +
Preference number: 2 (lower is better)
Translates to: PGRGLFGGGPLAHRTSTPASGVG*GSGLHS
Trigger: GGAATGGAGACCAGACCCCCAGCCAACACCGCTCGC...GGGGGTGCTGGTCCGGTGTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp CCGGACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCAGAGAGCTGGAGCGGTaGGTGGATCTGATCCGCCGA +
Preference number: 2 (lower is better)
Translates to: PDQHPRAQLPIIPHAPRTRELER*VDLIRR
Trigger: TCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCT...GGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGTCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp TGCTGGTCCTTGGTGGAGGGATGTGTCCAGGCGGCCGTGCTGTGGATCCGGAGGTTGGTGGGGGCCCACTaGCACACCGGACCAGCACCC +
Preference number: 2 (lower is better)
Translates to: CWSLVEGCVQAAVLWIRRLVGAH*HTGPAP
Trigger: GGGTGCTGGTCCGGTGTGCCAGTGGGCCCCCACCAA...CCTCCGGATCCACAGCACGGCCGCCTGGACACATCCCTCCACCAAGGACCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR GCA 90 bp ACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTCGCCGCCGACAGCAGTCTaGATCTGGGATCCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: TSTPGLSCPSSPMLPGPSPPTAV*IWDPQR
Trigger: TCTCTGGGGATCCCAGATGCAGACTGCTGTCGGCGG...CGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR GCA 90 bp ACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTCGAGGAGGTGTGTCCTCTaGAGGGGTGGGGATGTCCAC +
Preference number: 2 (lower is better)
Translates to: TSTPGLSCPSSPMLPGPSRRCVL*RGGDVH
Trigger: GTGGACATCCCCACCCCTGCAGAGGACACACCTCCT...CGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR GCA 90 bp ACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTCGGACGACTCTGACAGTTaGTTCCTGGGGCTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: TSTPGLSCPSSPMLPGPSDDSDS*FLGLLL
Trigger: GAGCAGCAGCCCCAGGAAGCAACTGTCAGAGTCGTC...CGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp CCGGACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCACAGCAGTCTGCATCTaGGATCCCCAGAGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: PDQHPRAQLPIIPHAPRTTAVCI*DPQRAG
Trigger: TCCAGCTCTCTGGGGATCCCAGATGCAGACTGCTGT...GGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR TCA 90 bp TGCTGGTCCTTGGTGGAGGGATGTGTCCAGGCGGCCGTGCTGTGGATCCGGAGGTTCCTCGGAGCTTCCTaGACTCCATGTGCCGCCGAC +
Preference number: 2 (lower is better)
Translates to: CWSLVEGCVQAAVLWIRRFLGAS*TPCAAD
Trigger: GTCGGCGGCACATGGAGTTCAGGAAGCTCCGAGGAA...CCTCCGGATCCACAGCACGGCCGCCTGGACACATCCCTCCACCAAGGACCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR GCA 90 bp AAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGTAGGCGGTGGGGTGTCCAGGCGGCCGTaGTGTGGATCCGGAGGGGGC +
Preference number: 2 (lower is better)
Translates to: KAVWCHSLGAGTLPVGGGVSRRP*CGSGGG
Trigger: GCCCCCTCCGGATCCACAGCACGGCCGCCTGGACAC...CCCACCGCCTACTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp ACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTCGCCTCAATGTCCCCAATaGAGGGTCCTTTCCCGGGAT +
Preference number: 2 (lower is better)
Translates to: TSTPGLSCPSSPMLPGPSPQCPQ*RVLSRD
Trigger: ATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGG...CGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp AAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGTAGGCGGTGGGAGGACGGGGGCTGTTTaGTGGGGGCCCACTGGCACA +
Preference number: 2 (lower is better)
Translates to: KAVWCHSLGAGTLPVGGGRTGAV*WGPTGT
Trigger: TGTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCT...CCCACCGCCTACTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp AAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGTAGGCGGTGGGGCGAGCGGTGTTGGCTaGGGGTCTGGTCTCCATTCC +
Preference number: 2 (lower is better)
Translates to: KAVWCHSLGAGTLPVGGGASGVG*GSGLHS
Trigger: GGAATGGAGACCAGACCCCCAGCCAACACCGCTCGC...CCCACCGCCTACTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR TCA 90 bp AAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGTAGGCGGTGGGTTCCTCGGAGCTTCCTaGACTCCATGTGCCGCCGAC +
Preference number: 2 (lower is better)
Translates to: KAVWCHSLGAGTLPVGGGFLGAS*TPCAAD
Trigger: GTCGGCGGCACATGGAGTTCAGGAAGCTCCGAGGAA...CCCACCGCCTACTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR GCA 90 bp AAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGTAGGCGGTGGGGAAGATGCCTTCCTCTaGCCCCAGGAGCAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: KAVWCHSLGAGTLPVGGGEDAFL*PQEQVL
Trigger: CAGCACCTGCTCCTGGGGGCAGAGGAAGGCATCTTC...CCCACCGCCTACTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp GCTAATGTGAGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCTGTCCTCTGCAGGGGTaGGGATGTCCACGTCGTCAT +
Preference number: 2 (lower is better)
Translates to: ANVSDGVSCSGLFPFQQACPLQG*GCPRRH
Trigger: ATGACGACGTGGACATCCCCACCCCTGCAGAGGACA...GGCCTGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR GCA 90 bp GGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGGCCCATCATCCCCCATaGTCCCAGGACCCTCGTCTG +
Preference number: 2 (lower is better)
Translates to: GGIIRLCGAIHWELVPCQAHHPP*SQDPRL
Trigger: CAGACGAGGGTCCTGGGAGCATGGGGGATGATGGGC...CTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR TCA 90 bp CCTGGATCTTGGTGGAAACCATGTTCTTCCTGGAGAATAGGTAGGTGTGAAGGGCCCAGGACCCTCGTCTaGTGGAGAACGGAACTTGGG +
Preference number: 2 (lower is better)
Translates to: PGSWWKPCSSWRIGRCEGPRTLV*WRTELG
Trigger: CCCAAGTTCCGTTCTCCATCAGACGAGGGTCCTGGG...CCCTTCACACCTACCTATTCTCCAGGAAGAACATGGTTTCCACCAAGATCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp GGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGTGTTGGCTGGGGGTCTaGTCTCCATTCCTCGGAGCT +
Preference number: 2 (lower is better)
Translates to: GGIIRLCGAIHWELVPCQCWLGV*SPFLGA
Trigger: AGCTCCGAGGAATGGAGACCAGACCCCCAGCCAACA...CTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp CATGGGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGAGTGAGGGTTCTGAATaGGCGGTGAGGTGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: HGRNYKAVWCHSLGAGTLSEGSE*AVRWGL
Trigger: CAGCCCCCACCTCACCGCCCATTCAGAACCCTCACT...CAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp CCTGGATCTTGGTGGAAACCATGTTCTTCCTGGAGAATAGGTAGGTGTGAAGGGCCCAGGAGCAGGTGCTaGTCCTTGGTGGAGGGATGT +
Preference number: 2 (lower is better)
Translates to: PGSWWKPCSSWRIGRCEGPRSRC*SLVEGC
Trigger: ACATCCCTCCACCAAGGACCAGCACCTGCTCCTGGG...CCCTTCACACCTACCTATTCTCCAGGAAGAACATGGTTTCCACCAAGATCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp CCTGGATCTTGGTGGAAACCATGTTCTTCCTGGAGAATAGGTAGGTGTGAAGGGTCCAGCGTGGCCTCCTaGTCATTCCGGTTCAGGATG +
Preference number: 2 (lower is better)
Translates to: PGSWWKPCSSWRIGRCEGSSVAS*SFRFRM
Trigger: CATCCTGAACCGGAATGACCAGGAGGCCACGCTGGA...CCCTTCACACCTACCTATTCTCCAGGAAGAACATGGTTTCCACCAAGATCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR TCA 90 bp CATGGGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGATCGTCAGACGACTCTaGCAGTTGCTTCCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: HGRNYKAVWCHSLGAGTLIVRRL*QLLPGA
Trigger: AGCCCCAGGAAGCAACTGTCAGAGTCGTCTGACGAT...CAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR TCA 90 bp CATGGGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCATTCCGGTTCAGGATaGAGATGCCTTCCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: HGRNYKAVWCHSLGAGTLHSGSG*RCLPLP
Trigger: GGGCAGAGGAAGGCATCTTCATCCTGAACCGGAATG...CAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CCA 90 bp CATGGGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGACAGCAGTCTGCATCTaGGATCCCCAGAGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: HGRNYKAVWCHSLGAGTLTAVCI*DPQRAG
Trigger: TCCAGCTCTCTGGGGATCCCAGATGCAGACTGCTGT...CAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CAA 90 bp TGCTGGTCCTTGGTGGAGGGATGTGTCCAGGCGGCCGTGCTGTGGATCCGGAGGTGTAGGCGAGCGGTGTaGGCTGGGGGTCTGGTCTCC +
Preference number: 3 (lower is better)
Translates to: CWSLVEGCVQAAVLWIRRCRRAV*AGGLVS
Trigger: GGAGACCAGACCCCCAGCCAACACCGCTCGCCTACA...CCTCCGGATCCACAGCACGGCCGCCTGGACACATCCCTCCACCAAGGACCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CAA 90 bp TCAAGCTCCCGGGAGGGTGGGTTCCAGAGTGAGGGTTCTGAATGGGCGGTGAGGCAGGACGGGGGCTGTTaGGTGGGGGCCCACTGGCAC +
Preference number: 3 (lower is better)
Translates to: SSSREGGFQSEGSEWAVRQDGGC*VGAHWH
Trigger: GTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTG...CCTCACCGCCCATTCAGAACCCTCACTCTGGAACCCACCCTCCCGGGAGCTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR GCA 72 bp CCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATaGTCCCAGGACCCTCGTCTGATGGAGAACGGAACT +
Preference number: 3 (lower is better)
Translates to: PAPPGSAAHHPP*SQDPRLMENGT
Trigger: AGTTCCGTTCTCCATCAGACGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR CCA 72 bp CCTGAACTCCATGTGCCGCCGACAGCAGTCTGCATCTaGGATCCCCAGAGAGCTGGAGCGGTGGGTGGATCT +
Preference number: 3 (lower is better)
Translates to: PELHVPPTAVCI*DPQRAGAVGGS
Trigger: AGATCCACCCACCGCTCCAGCTCTCTGGGGATCCCAGATGCAGACTGCTGTCGGCGGCACATGGAGTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR TCA 72 bp TGGCTGGGGGTCTGGTCTCCATTCCTCGGAGCTTCCTaGACTCCATGTGCCGCCGACAGCAGTCTGCATCTG +
Preference number: 3 (lower is better)
Translates to: WLGVWSPFLGAS*TPCAADSSLHL
Trigger: CAGATGCAGACTGCTGTCGGCGGCACATGGAGTTCAGGAAGCTCCGAGGAATGGAGACCAGACCCCCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CAA 90 bp CTCCTGAGGTCTCGAGGAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCCCGGGATTCTTCAGTTaGTCAAGAAGATCCAGGATC +
Preference number: 3 (lower is better)
Translates to: LLRSRGGCRRAVLAGGLVPGFFS*SRRSRI
Trigger: GATCCTGGATCTTCTTGACAAACTGAAGAATCCCGG...GACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTCCTCGAGACCTCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR TCA 72 bp AGCTGGTACCTTGCCAGTAGGCGGTGGGGGCTAATGTaGGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGT +
Preference number: 3 (lower is better)
Translates to: SWYLASRRWGLM*AMGFPALVSFR
Trigger: ACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGCCCCCACCGCCTACTGGCAAGGTACCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR-3UTR CAA 90 bp CCTGGATCTTGGTGGAAACCATGTTCTTCCTGGAGAATAGGTAGGTGTGAAGGGTGTAGGCGAGCGGTGTaGGCTGGGGGTCTGGTCTCC +
Preference number: 3 (lower is better)
Translates to: PGSWWKPCSSWRIGRCEGCRRAV*AGGLVS
Trigger: GGAGACCAGACCCCCAGCCAACACCGCTCGCCTACA...CCCTTCACACCTACCTATTCTCCAGGAAGAACATGGTTTCCACCAAGATCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR CCA 72 bp GGGGTAGCTCGGGCTCCTCATCCTCAATGTCCCCAATaGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAA +
Preference number: 3 (lower is better)
Translates to: GVARAPHPQCPQ*RVLSRDSSVCQ
Trigger: TTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGGATGAGGAGCCCGAGCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
3UTR TCA 72 bp CTAAAGTCATGTTTATTGGGAGATGAGGACATGCCATaGCCACTAGTGTGTCTATGGGGGAGGGGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: LKSCLLGDEDMP*PLVCLWGRGCK
Trigger: CTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCCTCATCTCCCAATAAACATGACTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp CCAGGACGGGGGCTGTTTGGTGGGGGCCCACTGGCACACCGGACCAGCACCCCCGTGTCCAGGCGGCCGTaGTGTGGATCCGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PGRGLFGGGPLAHRTSTPVSRRP*CGSGGG
Trigger: GCCCCCTCCGGATCCACAGCACGGCCGCCTGGACAC...GGGGGTGCTGGTCCGGTGTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp ACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTCGGTGTCCAGGCGGCCGTaGTGTGGATCCGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TSTPGLSCPSSPMLPGPSVSRRP*CGSGGG
Trigger: GCCCCCTCCGGATCCACAGCACGGCCGCCTGGACAC...CGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp ACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTCGTTGGTGGGGGCCCACTaGCACACCGGACCAGCACCC +
Preference number: 4 (lower is better)
Translates to: TSTPGLSCPSSPMLPGPSLVGAH*HTGPAP
Trigger: GGGTGCTGGTCCGGTGTGCCAGTGGGCCCCCACCAA...CGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp CCGGACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCGAAGATGCCTTCCTCTaGCCCCAGGAGCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PDQHPRAQLPIIPHAPRTEDAFL*PQEQVL
Trigger: CAGCACCTGCTCCTGGGGGCAGAGGAAGGCATCTTC...GGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGTCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp GGACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTTTCCTCGGAGCTTCCTaGACTCCATGTGCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: GPAPPGSAAHHPPCSQDPFLGAS*TPCAAD
Trigger: GTCGGCGGCACATGGAGTTCAGGAAGCTCCGAGGAA...AGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp ACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTCGCCCAGGACCCTCGTCTaGTGGAGAACGGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: TSTPGLSCPSSPMLPGPSPRTLV*WRTELG
Trigger: CCCAAGTTCCGTTCTCCATCAGACGAGGGTCCTGGG...CGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp ACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTCGCGGTGGGGGCTAATGTaGGCGATGGGGTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TSTPGLSCPSSPMLPGPSRWGLM*AMGFPA
Trigger: AGCAGGAAACCCCATCGCTCACATTAGCCCCCACCG...CGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CCAGGACGGGGGCTGTTTGGTGGGGGCCCACTGGCACACCGGACCAGCACCCCCCCTCAATGTCCCCAATaGAGGGTCCTTTCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: PGRGLFGGGPLAHRTSTPPQCPQ*RVLSRD
Trigger: ATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGG...GGGGGTGCTGGTCCGGTGTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTGG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp CCAGGACGGGGGCTGTTTGGTGGGGGCCCACTGGCACACCGGACCAGCACCCCCAGCGATGGGGTTTCCTaGTCTGGTCTCTTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: PGRGLFGGGPLAHRTSTPSDGVS*SGLFPF
Trigger: GAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCT...GGGGGTGCTGGTCCGGTGTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp ACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTCGAGTAGGGTGTCCCAATaGAAGAGAGGCGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TSTPGLSCPSSPMLPGPSSRVSQ*KRGVWP
Trigger: TGGCCAGACGCCTCTCTTTCATTGGGACACCCTACT...CGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp GGACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTGGAGGGGGCAGCCATTaGACAACTTTACGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GPAPPGSAAHHPPCSQDPGGGSH*TTLREG
Trigger: CCCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCC...AGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp GGACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTCATTCCGGTTCAGGATaGAGATGCCTTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GPAPPGSAAHHPPCSQDPHSGSG*RCLPLP
Trigger: GGGCAGAGGAAGGCATCTTCATCCTGAACCGGAATG...AGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp TGCTGGTCCTTGGTGGAGGGATGTGTCCAGGCGGCCGTGCTGTGGATCCGGAGGCTTCAGGGCCACAGCTaGCACTTCCGGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: CWSLVEGCVQAAVLWIRRLQGHS*HFRSHP
Trigger: TGGATGGCTCCGGAAGTGGCAGCTGTGGCCCTGAAG...CCTCCGGATCCACAGCACGGCCGCCTGGACACATCCCTCCACCAAGGACCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGTGTCCAGGCGGCCGTaGTGTGGATCCGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPVSRRP*CGSGGG
Trigger: GCCCCCTCCGGATCCACAGCACGGCCGCCTGGACAC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CCCAGAGAGCTGGAGCGGTGGGTGGATCTGATCCGCCGAGGGATAGCAGGGGGTAGAGAGCTGGAGCGGTaGGTGGATCTGATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: PRELERWVDLIRRGIAGGRELER*VDLIRR
Trigger: TCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCT...ACCCCCTGCTATCCCTCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp TGCTGGTCCTTGGTGGAGGGATGTGTCCAGGCGGCCGTGCTGTGGATCCGGAGGAGTGAGGGTTCTGAATaGGCGGTGAGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CWSLVEGCVQAAVLWIRRSEGSE*AVRWGL
Trigger: CAGCCCCCACCTCACCGCCCATTCAGAACCCTCACT...CCTCCGGATCCACAGCACGGCCGCCTGGACACATCCCTCCACCAAGGACCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CTCCTGAGGTCTCGAGGAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCGCAGGTGCTGGTCCTTaGTGGAGGGATGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLRSRGGCRRAVLAGGLVAGAGP*WRDVSR
Trigger: CCTGGACACATCCCTCCACCAAGGACCAGCACCTGC...GACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTCCTCGAGACCTCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp TGCTGGTCCTTGGTGGAGGGATGTGTCCAGGCGGCCGTGCTGTGGATCCGGAGGCCCAGGAGCAGGTGCTaGTCCTTGGTGGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: CWSLVEGCVQAAVLWIRRPRSRC*SLVEGC
Trigger: ACATCCCTCCACCAAGGACCAGCACCTGCTCCTGGG...CCTCCGGATCCACAGCACGGCCGCCTGGACACATCCCTCCACCAAGGACCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp GAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCTCCATTCCTCGGAGCTCCGCCGACAGCAGTCTaGATCTGGGATCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: EAVGERCWLGVWSPFLGAPPTAV*IWDPQR
Trigger: TCTCTGGGGATCCCAGATGCAGACTGCTGTCGGCGG...AGCTCCGAGGAATGGAGACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp CTCCTGAGGTCTCGAGGAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCGACGACTCTGACAGTTaGTTCCTGGGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLRSRGGCRRAVLAGGLVDDSDS*FLGLLL
Trigger: GAGCAGCAGCCCCAGGAAGCAACTGTCAGAGTCGTC...GACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTCCTCGAGACCTCAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp TCAAGCTCCCGGGAGGGTGGGTTCCAGAGTGAGGGTTCTGAATGGGCGGTGAGGGCCCATCATCCCCCATaGTCCCAGGACCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: SSSREGGFQSEGSEWAVRAHHPP*SQDPRL
Trigger: CAGACGAGGGTCCTGGGAGCATGGGGGATGATGGGC...CCTCACCGCCCATTCAGAACCCTCACTCTGGAACCCACCCTCCCGGGAGCTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGTGTCCAGGCGGCCGTaGTGTGGATCCGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDVSRRP*CGSGGG
Trigger: GCCCCCTCCGGATCCACAGCACGGCCGCCTGGACAC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp ACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTCGCCAGCAGGCCAAGGATaGTATGAGAATACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TSTPGLSCPSSPMLPGPSPAGQG*YENTGG
Trigger: CCCACCTGTATTCTCATAGCATCCTTGGCCTGCTGG...CGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCGGGGCTCACGCCGATaGACACAGCGGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPRGSRR*TQRAAQ
Trigger: CTGAGCTGCCCGCTGTGTGCATCGGCGTGAGCCCCG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GGACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTTTGATGCTGAGAGGGTaGACATCAAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GPAPPGSAAHHPPCSQDPLMLRG*TSKSGG
Trigger: GCCACCGCTCTTTGATGTGCACCCTCTCAGCATCAA...AGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCACGACGTCCATCCCTaGGGGCCTGAGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPHDVHP*GPELGL
Trigger: CAGGCCCAGCTCAGGCCCCCAGGGATGGACGTCGTG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000591517.5
ENST00000634395.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp TGCTGGTCCTTGGTGGAGGGATGTGTCCAGGCGGCCGTGCTGTGGATCCGGAGGTGTCCTCTGCAGGGGTaGGGATGTCCACGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: CWSLVEGCVQAAVLWIRRCPLQG*GCPRRH
Trigger: ATGACGACGTGGACATCCCCACCCCTGCAGAGGACA...CCTCCGGATCCACAGCACGGCCGCCTGGACACATCCCTCCACCAAGGACCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp AAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGTAGGCGGTGGGTTGGTGGGGGCCCACTaGCACACCGGACCAGCACCC +
Preference number: 4 (lower is better)
Translates to: KAVWCHSLGAGTLPVGGGLVGAH*HTGPAP
Trigger: GGGTGCTGGTCCGGTGTGCCAGTGGGCCCCCACCAA...CCCACCGCCTACTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCTTGGTGGGGGCCCACTaGCACACCGGACCAGCACCC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPLVGAH*HTGPAP
Trigger: GGGTGCTGGTCCGGTGTGCCAGTGGGCCCCCACCAA...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCACGGGGGCTGTTTGGTaGGGGCCCACTGGCACACCG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPTGAVW*GPTGTP
Trigger: CGGTGTGCCAGTGGGCCCCCACCAAACAGCCCCCGT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTTGGGGTTTCCTGCTCTaGTCTCTTTCCGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GPAPPGSAAHHPPCSQDPWGFLL*SLSVPA
Trigger: TGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCA...AGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGGGCAGCTCAGAGCCTaGCCCGGTCAGCAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPGQLRA*PGQQRE
Trigger: TTCGCGCTGCTGACCGGGCCAGGCTCTGAGCTGCCC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CCAGGACGGGGGCTGTTTGGTGGGGGCCCACTGGCACACCGGACCAGCACCCCCTGTCCTGGATCTTGGTaGAAACCATGTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGRGLFGGGPLAHRTSTPCPGSW*KPCSSW
Trigger: CCAGGAAGAACATGGTTTCCACCAAGATCCAGGACA...GGGGGTGCTGGTCCGGTGTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp CTCCTGAGGTCTCGAGGAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCATCGTCAGACGACTCTaGCAGTTGCTTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLRSRGGCRRAVLAGGLVIVRRL*QLLPGA
Trigger: AGCCCCAGGAAGCAACTGTCAGAGTCGTCTGACGAT...GACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTCCTCGAGACCTCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp TGCTGGTCCTTGGTGGAGGGATGTGTCCAGGCGGCCGTGCTGTGGATCCGGAGGGGAGGGGGCAGCCATTaGACAACTTTACGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: CWSLVEGCVQAAVLWIRRGGGSH*TTLREG
Trigger: CCCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCC...CCTCCGGATCCACAGCACGGCCGCCTGGACACATCCCTCCACCAAGGACCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp CTCCTGAGGTCTCGAGGAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCCATTCCGGTTCAGGATaGAGATGCCTTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LLRSRGGCRRAVLAGGLVHSGSG*RCLPLP
Trigger: GGGCAGAGGAAGGCATCTTCATCCTGAACCGGAATG...GACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTCCTCGAGACCTCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCACCCCCGGGCTCAGCTaGCCATCATCCCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPTPGLS*PSSPML
Trigger: GAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 25 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGTGTCCAGGCGGCCGTaGTGTGGATCCGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPVSRRP*CGSGGG
Trigger: GCCCCCTCCGGATCCACAGCACGGCCGCCTGGACAC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGCCCCCAGGAGCAGGTaGTGGTCCTTGGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPAPRSR*WSLVEG
Trigger: TCCCTCCACCAAGGACCAGCACCTGCTCCTGGGGGC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCGGGGCTCACGCCGATaGACACAGCGGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDRGSRR*TQRAAQ
Trigger: CTGAGCTGCCCGCTGTGTGCATCGGCGTGAGCCCCG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGTCCCCTGTGCTCGGTaGTCATCTCGCCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPVPCAR*SSRPAS
Trigger: GCTGGCTGGGCGAGATGAGCACCGAGCACAGGGGAC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCACGACGTCCATCCCTaGGGGCCTGAGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDHDVHP*GPELGL
Trigger: CAGGCCCAGCTCAGGCCCCCAGGGATGGACGTCGTG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000591517.5
ENST00000634395.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACTTGGTGGGGGCCCACTaGCACACCGGACCAGCACCC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDLVGAH*HTGPAP
Trigger: GGGTGCTGGTCCGGTGTGCCAGTGGGCCCCCACCAA...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCTAATGTGAGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCACGGGGGCTGTTTGGTaGGGGCCCACTGGCACACCG +
Preference number: 4 (lower is better)
Translates to: ANVSDGVSCSGLFPFQQATGAVW*GPTGTP
Trigger: CGGTGTGCCAGTGGGCCCCCACCAAACAGCCCCCGT...GGCCTGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp TCAAGCTCCCGGGAGGGTGGGTTCCAGAGTGAGGGTTCTGAATGGGCGGTGAGGAGTGAGGGTTCTGAATaGGCGGTGAGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSREGGFQSEGSEWAVRSEGSE*AVRWGL
Trigger: CAGCCCCCACCTCACCGCCCATTCAGAACCCTCACT...CCTCACCGCCCATTCAGAACCCTCACTCTGGAACCCACCCTCCCGGGAGCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp TCAAGCTCCCGGGAGGGTGGGTTCCAGAGTGAGGGTTCTGAATGGGCGGTGAGGCCCAGGAGCAGGTGCTaGTCCTTGGTGGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: SSSREGGFQSEGSEWAVRPRSRC*SLVEGC
Trigger: ACATCCCTCCACCAAGGACCAGCACCTGCTCCTGGG...CCTCACCGCCCATTCAGAACCCTCACTCTGGAACCCACCCTCCCGGGAGCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CCGGACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCTGGTGTCCTGGATCTTaGTGGAAACCATGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PDQHPRAQLPIIPHAPRTWCPGS*WKPCSS
Trigger: GGAAGAACATGGTTTCCACCAAGATCCAGGACACCA...GGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCAGAGGCGTCGGCAGTaGGAACAGCACCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPQRRRQ*EQHLPD
Trigger: GTCCGGCAGGTGCTGTTCCCACTGCCGACGCCTCTG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGGGCAGCTCAGAGCCTaGCCCGGTCAGCAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDGQLRA*PGQQRE
Trigger: TTCGCGCTGCTGACCGGGCCAGGCTCTGAGCTGCCC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CCCAGAGAGCTGGAGCGGTGGGTGGATCTGATCCGCCGAGGGATAGCAGGGGGTCCATTCATTGGGAGCTaGTACCTTGCCAGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: PRELERWVDLIRRGIAGGPFIGS*YLASRR
Trigger: CCGCCTACTGGCAAGGTACCAGCTCCCAATGAATGG...ACCCCCTGCTATCCCTCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACTCCCGCAGAGCTCCGTaGCCTCATGGCCGCGCGCAA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDSRRAP*PHGRAQ
Trigger: TTGCGCGCGGCCATGAGGCCACGGAGCTCTGCGGGA...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000589130.5
ENST00000634456.1
CDS-3UTR GCA 90 bp TCTGCATCTGGGATCCCCAGAGAGCTGGAGCGGTGGGTGGATCTGATCCGCCGAGACGACTCTGACAGTTaGTTCCTGGGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SASGIPRELERWVDLIRRDDSDS*FLGLLL
Trigger: GAGCAGCAGCCCCAGGAAGCAACTGTCAGAGTCGTC...TCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCTGGGGATCCCAGATGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGCCCATCATCCCCCATaGTCCCAGGACCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPAHHPP*SQDPRL
Trigger: CAGACGAGGGTCCTGGGAGCATGGGGGATGATGGGC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GCTAATGTGAGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCACCCCCGGGCTCAGCTaGCCATCATCCCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: ANVSDGVSCSGLFPFQQATPGLS*PSSPML
Trigger: GAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGT...GGCCTGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGGGCTCAGCTaGCCATCATCCCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDTPGLS*PSSPML
Trigger: GAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGCCCCCAGGAGCAGGTaGTGGTCCTTGGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDAPRSR*WSLVEG
Trigger: TCCCTCCACCAAGGACCAGCACCTGCTCCTGGGGGC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCGGGGCTCACGCCGATaGACACAGCGGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVRGSRR*TQRAAQ
Trigger: CTGAGCTGCCCGCTGTGTGCATCGGCGTGAGCCCCG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCGGGGCTCACGCCGATaGACACAGCGGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPRGSRR*TQRAAQ
Trigger: CTGAGCTGCCCGCTGTGTGCATCGGCGTGAGCCCCG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGTCCCCTGTGCTCGGTaGTCATCTCGCCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDVPCAR*SSRPAS
Trigger: GCTGGCTGGGCGAGATGAGCACCGAGCACAGGGGAC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCTCTACCTGGGTCACCTaGACGGGTCCCCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPSTWVT*TGPLCS
Trigger: CGAGCACAGGGGACCCGTGCAGGTGACCCAGGTAGA...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CCCAGAGAGCTGGAGCGGTGGGTGGATCTGATCCGCCGAGGGATAGCAGGGGGTTTGATGCTGAGAGGGTaGACATCAAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PRELERWVDLIRRGIAGGLMLRG*TSKSGG
Trigger: GCCACCGCTCTTTGATGTGCACCCTCTCAGCATCAA...ACCCCCTGCTATCCCTCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCACGACGTCCATCCCTaGGGGCCTGAGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVHDVHP*GPELGL
Trigger: CAGGCCCAGCTCAGGCCCCCAGGGATGGACGTCGTG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000591517.5
ENST00000634395.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCACGACGTCCATCCCTaGGGGCCTGAGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPHDVHP*GPELGL
Trigger: CAGGCCCAGCTCAGGCCCCCAGGGATGGACGTCGTG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000591517.5
ENST00000634395.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCTCCATTCCTCGGAGCTACAGCAGTCTGCATCTaGGATCCCCAGAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: EAVGERCWLGVWSPFLGATAVCI*DPQRAG
Trigger: TCCAGCTCTCTGGGGATCCCAGATGCAGACTGCTGT...AGCTCCGAGGAATGGAGACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTTGGTGGGGGCCCACTaGCACACCGGACCAGCACCC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPLVGAH*HTGPAP
Trigger: GGGTGCTGGTCCGGTGTGCCAGTGGGCCCCCACCAA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTACGGGGGCTGTTTGGTaGGGGCCCACTGGCACACCG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVTGAVW*GPTGTP
Trigger: CGGTGTGCCAGTGGGCCCCCACCAAACAGCCCCCGT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTACGGGGGCTGTTTGGTaGGGGCCCACTGGCACACCG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPTGAVW*GPTGTP
Trigger: CGGTGTGCCAGTGGGCCCCCACCAAACAGCCCCCGT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGGACGGGGGCTGTTTaGTGGGGGCCCACTGGCACA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDRTGAV*WGPTGT
Trigger: TGTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CTCCTGAGGTCTCGAGGAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCTGGGGTTTCCTGCTCTaGTCTCTTTCCGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLRSRGGCRRAVLAGGLVWGFLL*SLSVPA
Trigger: TGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCA...GACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTCCTCGAGACCTCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp ACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCCTCGTGGTGTCCTGGATCTTaGTGGAAACCATGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TSTPGLSCPSSPMLPGPSWCPGS*WKPCSS
Trigger: GGAAGAACATGGTTTCCACCAAGATCCAGGACACCA...CGAGGGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCAGAGGCGTCGGCAGTaGGAACAGCACCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDQRRRQ*EQHLPD
Trigger: GTCCGGCAGGTGCTGTTCCCACTGCCGACGCCTCTG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGGGCAGCTCAGAGCCTaGCCCGGTCAGCAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPGQLRA*PGQQRE
Trigger: TTCGCGCTGCTGACCGGGCCAGGCTCTGAGCTGCCC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGGGCAGCTCAGAGCCTaGCCCGGTCAGCAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVGQLRA*PGQQRE
Trigger: TTCGCGCTGCTGACCGGGCCAGGCTCTGAGCTGCCC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCCACCACTACAGGCCTaGGGGAGCCAAGCAGACGGA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPPPLQA*GSQADG
Trigger: TCCGTCTGCTTGGCTCCCCCAGGCCTGTAGTGGTGG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCTCCATTCCTCGGAGCTCCATTCATTGGGAGCTaGTACCTTGCCAGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: EAVGERCWLGVWSPFLGAPFIGS*YLASRR
Trigger: CCGCCTACTGGCAAGGTACCAGCTCCCAATGAATGG...AGCTCCGAGGAATGGAGACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CCCAGAGAGCTGGAGCGGTGGGTGGATCTGATCCGCCGAGGGATAGCAGGGGGTTGTGGTGCCATTCATTaGGAGCTGGTACCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: PRELERWVDLIRRGIAGGCGAIH*ELVPCQ
Trigger: CTGGCAAGGTACCAGCTCCCAATGAATGGCACCACA...ACCCCCTGCTATCCCTCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CTCCTGAGGTCTCGAGGAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCTGTGGTGCCATTCATTaGGAGCTGGTACCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LLRSRGGCRRAVLAGGLVCGAIH*ELVPCQ
Trigger: CTGGCAAGGTACCAGCTCCCAATGAATGGCACCACA...GACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTCCTCGAGACCTCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTCCCGCAGAGCTCCGTaGCCTCATGGCCGCGCGCAA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPSRRAP*PHGRAQ
Trigger: TTGCGCGCGGCCATGAGGCCACGGAGCTCTGCGGGA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000589130.5
ENST00000634456.1
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCTTCCTCGGAGCTTCCTaGACTCCATGTGCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPFLGAS*TPCAAD
Trigger: GTCGGCGGCACATGGAGTTCAGGAAGCTCCGAGGAA...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCCCAGGACCCTCGTCTaGTGGAGAACGGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPPRTLV*WRTELG
Trigger: CCCAAGTTCCGTTCTCCATCAGACGAGGGTCCTGGG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCGGTGGGGGCTAATGTaGGCGATGGGGTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPRWGLM*AMGFPA
Trigger: AGCAGGAAACCCCATCGCTCACATTAGCCCCCACCG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 25 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAGACTTCCCCATACGTaGCGCCACCCAGCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPRLPHT*RHPAAV
Trigger: TACAGCGGCTGGGTGGCGGCACGTATGGGGAAGTCT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCTTCAGGGCCACAGCTaGCACTTCCGGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPLQGHS*HFRSHP
Trigger: TGGATGGCTCCGGAAGTGGCAGCTGTGGCCCTGAAG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCCGCCGACAGCAGTCTaGATCTGGGATCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPPPTAV*IWDPQR
Trigger: TCTCTGGGGATCCCAGATGCAGACTGCTGTCGGCGG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAGGAGGTGTGTCCTCTaGAGGGGTGGGGATGTCCAC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPRRCVL*RGGDVH
Trigger: GTGGACATCCCCACCCCTGCAGAGGACACACCTCCT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGCCCATCATCCCCCATaGTCCCAGGACCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDAHHPP*SQDPRL
Trigger: CAGACGAGGGTCCTGGGAGCATGGGGGATGATGGGC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTACCCCCGGGCTCAGCTaGCCATCATCCCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVTPGLS*PSSPML
Trigger: GAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTACCCCCGGGCTCAGCTaGCCATCATCCCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPTPGLS*PSSPML
Trigger: GAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGCCCCCAGGAGCAGGTaGTGGTCCTTGGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPAPRSR*WSLVEG
Trigger: TCCCTCCACCAAGGACCAGCACCTGCTCCTGGGGGC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGCCCCCAGGAGCAGGTaGTGGTCCTTGGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVAPRSR*WSLVEG
Trigger: TCCCTCCACCAAGGACCAGCACCTGCTCCTGGGGGC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGAAGATGCCTTCCTCTaGCCCCAGGAGCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPEDAFL*PQEQVL
Trigger: CAGCACCTGCTCCTGGGGGCAGAGGAAGGCATCTTC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAACGGACGTCTCCAATaGACCGCACAGGAACGGGCC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPNGRLQ*TAQERA
Trigger: GGCCCGTTCCTGTGCGGTGCATTGGAGACGTCCGTT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGTCCCCTGTGCTCGGTaGTCATCTCGCCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPVPCAR*SSRPAS
Trigger: GCTGGCTGGGCGAGATGAGCACCGAGCACAGGGGAC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACTGGGGATCTCAGGTGTaGGAAGTCCCCGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDWGSQV*EVPGLG
Trigger: CCCCAGTCCGGGGACTTCGCACACCTGAGATCCCCA...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTCACGACGTCCATCCCTaGGGGCCTGAGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACHDVHP*GPELGL
Trigger: CAGGCCCAGCTCAGGCCCCCAGGGATGGACGTCGTG...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAGAGAGCTGGAGCGGTaGGTGGATCTGATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPRELER*VDLIRR
Trigger: TCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTACGGGGGCTGTTTGGTaGGGGCCCACTGGCACACCG +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACTGAVW*GPTGTP
Trigger: CGGTGTGCCAGTGGGCCCCCACCAAACAGCCCCCGT...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGGACGGGGGCTGTTTaGTGGGGGCCCACTGGCACA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVRTGAV*WGPTGT
Trigger: TGTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGGACGGGGGCTGTTTaGTGGGGGCCCACTGGCACA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPRTGAV*WGPTGT
Trigger: TGTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAGTGAGGGTTCTGAATaGGCGGTGAGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPSEGSE*AVRWGL
Trigger: CAGCCCCCACCTCACCGCCCATTCAGAACCCTCACT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGCAGGTGCTGGTCCTTaGTGGAGGGATGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPAGAGP*WRDVSR
Trigger: CCTGGACACATCCCTCCACCAAGGACCAGCACCTGC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCCCAGGAGCAGGTGCTaGTCCTTGGTGGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPPRSRC*SLVEGC
Trigger: ACATCCCTCCACCAAGGACCAGCACCTGCTCCTGGG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCACGCCCGGCAGCCTTTaGTGTCCTGGATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPTPGSL*CPGSWW
Trigger: CCACCAAGATCCAGGACACCAAAGGCTGCCGGGCGT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCAGAGGCGTCGGCAGTaGGAACAGCACCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVQRRRQ*EQHLPD
Trigger: GTCCGGCAGGTGCTGTTCCCACTGCCGACGCCTCTG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCCAAAGCGCACCGTGTaGAAGAGCACCGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPPKRTV*KSTDFP
Trigger: GGGGAAGTCGGTGCTCTTCCACACGGTGCGCTTTGG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCCACCACTACAGGCCTaGGGGAGCCAAGCAGACGGA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDPPLQA*GSQADG
Trigger: TCCGTCTGCTTGGCTCCCCCAGGCCTGTAGTGGTGG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGCTCCGTGGCCTCATaGCCGCGCGCAATACAACGC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDSSVAS*PRAIQR
Trigger: GCGTTGTATTGCGCGCGGCCATGAGGCCACGGAGCT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000589130.5
ENST00000634456.1
CDS-3UTR TCA 90 bp GCTAATGTGAGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCTTCCTCGGAGCTTCCTaGACTCCATGTGCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: ANVSDGVSCSGLFPFQQAFLGAS*TPCAAD
Trigger: GTCGGCGGCACATGGAGTTCAGGAAGCTCCGAGGAA...GGCCTGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp GCTAATGTGAGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCCCCAGGACCCTCGTCTaGTGGAGAACGGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: ANVSDGVSCSGLFPFQQAPRTLV*WRTELG
Trigger: CCCAAGTTCCGTTCTCCATCAGACGAGGGTCCTGGG...GGCCTGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCGGTGGGGGCTAATGTaGGCGATGGGGTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDRWGLM*AMGFPA
Trigger: AGCAGGAAACCCCATCGCTCACATTAGCCCCCACCG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCATGGGCTGGTACCACTaGAGCAGGACAACGGACGTC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPMGWYH*SRTTDV
Trigger: GACGTCCGTTGTCCTGCTTCAGTGGTACCAGCCCAT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGACTTCCCCATACGTaGCGCCACCCAGCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDRLPHT*RHPAAV
Trigger: TACAGCGGCTGGGTGGCGGCACGTATGGGGAAGTCT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCTTCAGGGCCACAGCTaGCACTTCCGGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDLQGHS*HFRSHP
Trigger: TGGATGGCTCCGGAAGTGGCAGCTGTGGCCCTGAAG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCCGCCGACAGCAGTCTaGATCTGGGATCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDPPTAV*IWDPQR
Trigger: TCTCTGGGGATCCCAGATGCAGACTGCTGTCGGCGG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GCTAATGTGAGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCCCGCCGACAGCAGTCTaGATCTGGGATCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ANVSDGVSCSGLFPFQQAPPTAV*IWDPQR
Trigger: TCTCTGGGGATCCCAGATGCAGACTGCTGTCGGCGG...GGCCTGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGCCCATCATCCCCCATaGTCCCAGGACCCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVAHHPP*SQDPRL
Trigger: CAGACGAGGGTCCTGGGAGCATGGGGGATGATGGGC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGAAGATGCCTTCCTCTaGCCCCAGGAGCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDEDAFL*PQEQVL
Trigger: CAGCACCTGCTCCTGGGGGCAGAGGAAGGCATCTTC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp TCGGGCTCCTCATCCTCAATGTCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCGAAGATGCCTTCCTCTaGCCCCAGGAGCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SGSSSSMSPMEGPFPGFFEDAFL*PQEQVL
Trigger: CAGCACCTGCTCCTGGGGGCAGAGGAAGGCATCTTC...GAAGAATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGGATGAGGAGCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAACGGACGTCTCCAATaGACCGCACAGGAACGGGCC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDNGRLQ*TAQERA
Trigger: GGCCCGTTCCTGTGCGGTGCATTGGAGACGTCCGTT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTCTACCTGGGTCACCTaGACGGGTCCCCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPSTWVT*TGPLCS
Trigger: CGAGCACAGGGGACCCGTGCAGGTGACCCAGGTAGA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTTCTACCTGGGTCACCTaGACGGGTCCCCTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVSTWVT*TGPLCS
Trigger: CGAGCACAGGGGACCCGTGCAGGTGACCCAGGTAGA...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTGGGGATCTCAGGTGTaGGAAGTCCCCGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPWGSQV*EVPGLG
Trigger: CCCCAGTCCGGGGACTTCGCACACCTGAGATCCCCA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTTGGGGATCTCAGGTGTaGGAAGTCCCCGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVWGSQV*EVPGLG
Trigger: CCCCAGTCCGGGGACTTCGCACACCTGAGATCCCCA...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGAGAGCTGGAGCGGTaGGTGGATCTGATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDRELER*VDLIRR
Trigger: TCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCTGTTGGCTGGGGGTCTaGTCTCCATTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPCWLGV*SPFLGA
Trigger: AGCTCCGAGGAATGGAGACCAGACCCCCAGCCAACA...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGCGAGCGGTGTTGGCTaGGGGTCTGGTCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVASGVG*GSGLHS
Trigger: GGAATGGAGACCAGACCCCCAGCCAACACCGCTCGC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGCGAGCGGTGTTGGCTaGGGGTCTGGTCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPASGVG*GSGLHS
Trigger: GGAATGGAGACCAGACCCCCAGCCAACACCGCTCGC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCTGTCCTCTGCAGGGGTaGGGATGTCCACGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPCPLQG*GCPRRH
Trigger: ATGACGACGTGGACATCCCCACCCCTGCAGAGGACA...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTAGGACGGGGGCTGTTTaGTGGGGGCCCACTGGCACA +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACRTGAV*WGPTGT
Trigger: TGTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCT...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGTGAGGGTTCTGAATaGGCGGTGAGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDSEGSE*AVRWGL
Trigger: CAGCCCCCACCTCACCGCCCATTCAGAACCCTCACT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGCAGGTGCTGGTCCTTaGTGGAGGGATGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDAGAGP*WRDVSR
Trigger: CCTGGACACATCCCTCCACCAAGGACCAGCACCTGC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCCCAGGAGCAGGTGCTaGTCCTTGGTGGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDPRSRC*SLVEGC
Trigger: ACATCCCTCCACCAAGGACCAGCACCTGCTCCTGGG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCCAAAGCGCACCGTGTaGAAGAGCACCGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDPKRTV*KSTDFP
Trigger: GGGGAAGTCGGTGCTCTTCCACACGGTGCGCTTTGG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCCACCACTACAGGCCTaGGGGAGCCAAGCAGACGGA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPPPLQA*GSQADG
Trigger: TCCGTCTGCTTGGCTCCCCCAGGCCTGTAGTGGTGG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCACCACTACAGGCCTaGGGGAGCCAAGCAGACGGA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVPPLQA*GSQADG
Trigger: TCCGTCTGCTTGGCTCCCCCAGGCCTGTAGTGGTGG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCCACTAGTGTGTCTATaGGGGAGGGGGTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPPLVCL*GRGCKD
Trigger: GTCCTTGCACCCCCTCCCCCATAGACACACTAGTGG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 26 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCACTGCACTCCAGCCTaGGGGAGCCAAGCAGACGGA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPHCTPA*GSQADG
Trigger: TCCGTCTGCTTGGCTCCCCCAGGCTGGAGTGCAGTG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCACTGCACTCCAGCCTaGGGGAGCCAAGCAGACGGA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVHCTPA*GSQADG
Trigger: TCCGTCTGCTTGGCTCCCCCAGGCTGGAGTGCAGTG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGCTCCGTGGCCTCATaGCCGCGCGCAATACAACGC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVSSVAS*PRAIQR
Trigger: GCGTTGTATTGCGCGCGGCCATGAGGCCACGGAGCT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000589130.5
ENST00000634456.1
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCCCGGGGGTCTCTATTaGAAATGTCAGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPPGGLY*KCQGPR
Trigger: TCGTGGACCCTGACATTTTCAATAGAGACCCCCGGG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 8 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000591517.5
ENST00000634395.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTGCCACCAGGTCCCCTaGCACCTTGTCTCGAGCCTT +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPCHQVP*HLVSSL
Trigger: AAGGCTCGAGACAAGGTGTCAGGGGACCTGGTGGCA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGCTAATCTGGAGCTCTaGCAGGGAGCCTGTCACTTG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPANLEL*QGACHL
Trigger: CAAGTGACAGGCTCCCTGTCAGAGCTCCAGATTAGC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAGTAGGGTGTCCCAATaGAAGAGAGGCGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPSRVSQ*KRGVWP
Trigger: TGGCCAGACGCCTCTCTTTCATTGGGACACCCTACT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTTCCTCGGAGCTTCCTaGACTCCATGTGCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPFLGAS*TPCAAD
Trigger: GTCGGCGGCACATGGAGTTCAGGAAGCTCCGAGGAA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCATCGTCAGACGACTCTaGCAGTTGCTTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPIVRRL*QLLPGA
Trigger: AGCCCCAGGAAGCAACTGTCAGAGTCGTCTGACGAT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCCCAGGACCCTCGTCTaGTGGAGAACGGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPPRTLV*WRTELG
Trigger: CCCAAGTTCCGTTCTCCATCAGACGAGGGTCCTGGG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCCAGGACCCTCGTCTaGTGGAGAACGGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVPRTLV*WRTELG
Trigger: CCCAAGTTCCGTTCTCCATCAGACGAGGGTCCTGGG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGGAGGGGGCAGCCATTaGACAACTTTACGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPGGGSH*TTLREG
Trigger: CCCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCATTCCGGTTCAGGATaGAGATGCCTTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPHSGSG*RCLPLP
Trigger: GGGCAGAGGAAGGCATCTTCATCCTGAACCGGAATG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCGGTGGGGGCTAATGTaGGCGATGGGGTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPRWGLM*AMGFPA
Trigger: AGCAGGAAACCCCATCGCTCACATTAGCCCCCACCG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACATGGGCTGGTACCACTaGAGCAGGACAACGGACGTC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDMGWYH*SRTTDV
Trigger: GACGTCCGTTGTCCTGCTTCAGTGGTACCAGCCCAT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGGCAGGAGAATTGCTTaGACCTGGGAGGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPGRRIA*TWEEEV
Trigger: AACCTCCTCCTCCCAGGTTCAAGCAATTCTCCTGCC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGACTTCCCCATACGTaGCGCCACCCAGCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVRLPHT*RHPAAV
Trigger: TACAGCGGCTGGGTGGCGGCACGTATGGGGAAGTCT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCTTCAGGGCCACAGCTaGCACTTCCGGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPLQGHS*HFRSHP
Trigger: TGGATGGCTCCGGAAGTGGCAGCTGTGGCCCTGAAG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCTTCAGGGCCACAGCTaGCACTTCCGGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVLQGHS*HFRSHP
Trigger: TGGATGGCTCCGGAAGTGGCAGCTGTGGCCCTGAAG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCCGCCGACAGCAGTCTaGATCTGGGATCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPPPTAV*IWDPQR
Trigger: TCTCTGGGGATCCCAGATGCAGACTGCTGTCGGCGG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCGCCGACAGCAGTCTaGATCTGGGATCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVPPTAV*IWDPQR
Trigger: TCTCTGGGGATCCCAGATGCAGACTGCTGTCGGCGG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGGAGGTGTGTCCTCTaGAGGGGTGGGGATGTCCAC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPRRCVL*RGGDVH
Trigger: GTGGACATCCCCACCCCTGCAGAGGACACACCTCCT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGGAGGTGTGTCCTCTaGAGGGGTGGGGATGTCCAC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVRRCVL*RGGDVH
Trigger: GTGGACATCCCCACCCCTGCAGAGGACACACCTCCT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp TCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGATCCAGGACCCCCGGGCTCAGCTaGCCATCATCCCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: SPMEGPFPGFFSLSRRSRTPGLS*PSSPML
Trigger: GAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGT...CCTGGATCTTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp CTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCAAGGATGCTATGAGAATACAGGTGCCCCCAGGAGCAGGTaGTGGTCCTTGGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLWSLSVPAGQGCYENTGAPRSR*WSLVEG
Trigger: TCCCTCCACCAAGGACCAGCACCTGCTCCTGGGGGC...ACCTGTATTCTCATAGCATCCTTGGCCTGCTGGAACGGAAAGAGACCAGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCCTAGAGCCCACACCTaGACTCCATGCTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPPRAHT*TPCFQK
Trigger: CTTCTGGAAGCATGGAGTGCAGGTGTGGGCTCTAGG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGGTAGGCCACGATGTTaGCGTGCCGGCAAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPGRPRC*RAGKFS
Trigger: TGAAAACTTGCCGGCACGCCAACATCGTGGCCTACC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGCATCTTGGTGGCGCTaGGTCGTTTCTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPASWWR*VVSWDS
Trigger: AGAGTCCCAAGAAACGACCCAGCGCCACCAAGATGC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGAGAGCTGGAGCGGTaGGTGGATCTGATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVRELER*VDLIRR
Trigger: TCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGAGAGCTGGAGCGGTaGGTGGATCTGATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPRELER*VDLIRR
Trigger: TCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCACAGCAGTCTGCATCTaGGATCCCCAGAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPTAVCI*DPQRAG
Trigger: TCCAGCTCTCTGGGGATCCCAGATGCAGACTGCTGT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GCTAATGTGAGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCTGTTGGCTGGGGGTCTaGTCTCCATTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: ANVSDGVSCSGLFPFQQACWLGV*SPFLGA
Trigger: AGCTCCGAGGAATGGAGACCAGACCCCCAGCCAACA...GGCCTGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACTGTTGGCTGGGGGTCTaGTCTCCATTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDCWLGV*SPFLGA
Trigger: AGCTCCGAGGAATGGAGACCAGACCCCCAGCCAACA...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTGCGAGCGGTGTTGGCTaGGGGTCTGGTCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACASGVG*GSGLHS
Trigger: GGAATGGAGACCAGACCCCCAGCCAACACCGCTCGC...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACTGTCCTCTGCAGGGGTaGGGATGTCCACGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDCPLQG*GCPRRH
Trigger: ATGACGACGTGGACATCCCCACCCCTGCAGAGGACA...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CTCAATGTCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGACGGGGGCTGTTTGGTaGGGGCCCACTGGCACACCG +
Preference number: 4 (lower is better)
Translates to: LNVPNGGSFPGILQFVKKTGAVW*GPTGTP
Trigger: CGGTGTGCCAGTGGGCCCCCACCAAACAGCCCCCGT...CTTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGACATTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp TCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGATCCAGGAGGACGGGGGCTGTTTaGTGGGGGCCCACTGGCACA +
Preference number: 4 (lower is better)
Translates to: SPMEGPFPGFFSLSRRSRRTGAV*WGPTGT
Trigger: TGTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCT...CCTGGATCTTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGTGAGGGTTCTGAATaGGCGGTGAGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPSEGSE*AVRWGL
Trigger: CAGCCCCCACCTCACCGCCCATTCAGAACCCTCACT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGTGAGGGTTCTGAATaGGCGGTGAGGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVSEGSE*AVRWGL
Trigger: CAGCCCCCACCTCACCGCCCATTCAGAACCCTCACT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGCAGGTGCTGGTCCTTaGTGGAGGGATGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVAGAGP*WRDVSR
Trigger: CCTGGACACATCCCTCCACCAAGGACCAGCACCTGC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCCAGGAGCAGGTGCTaGTCCTTGGTGGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVPRSRC*SLVEGC
Trigger: ACATCCCTCCACCAAGGACCAGCACCTGCTCCTGGG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCCCAGGAGCAGGTGCTaGTCCTTGGTGGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPPRSRC*SLVEGC
Trigger: ACATCCCTCCACCAAGGACCAGCACCTGCTCCTGGG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACTCCAGCGTGGCCTCCTaGTCATTCCGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDSSVAS*SFRFRM
Trigger: CATCCTGAACCGGAATGACCAGGAGGCCACGCTGGA...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAGAGCATTTCCAGCGTaGCCTCCTGGTCATTCCGGT +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPRAFPA*PPGHSG
Trigger: ACCGGAATGACCAGGAGGCCACGCTGGAAATGCTCT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTACGCCCGGCAGCCTTTaGTGTCCTGGATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVTPGSL*CPGSWW
Trigger: CCACCAAGATCCAGGACACCAAAGGCTGCCGGGCGT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCAAAGCGCACCGTGTaGAAGAGCACCGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVPKRTV*KSTDFP
Trigger: GGGGAAGTCGGTGCTCTTCCACACGGTGCGCTTTGG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCCACCGCTTCGGTCATaGGGATCTCAGGTGTGCGAA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDPPLRS*GSQVCE
Trigger: TTCGCACACCTGAGATCCCCATGACCGAAGCGGTGG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCCACTAGTGTGTCTATaGGGGAGGGGGTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDPLVCL*GRGCKD
Trigger: GTCCTTGCACCCCCTCCCCCATAGACACACTAGTGG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCTCCATTCCTCGGAGCTTGTCCTGGATCTTGGTaGAAACCATGTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: EAVGERCWLGVWSPFLGACPGSW*KPCSSW
Trigger: CCAGGAAGAACATGGTTTCCACCAAGATCCAGGACA...AGCTCCGAGGAATGGAGACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCCCGGGGGTCTCTATTaGAAATGTCAGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDPGGLY*KCQGPR
Trigger: TCGTGGACCCTGACATTTTCAATAGAGACCCCCGGG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000591517.5
ENST00000634395.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGCTAATCTGGAGCTCTaGCAGGGAGCCTGTCACTTG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDANLEL*QGACHL
Trigger: CAAGTGACAGGCTCCCTGTCAGAGCTCCAGATTAGC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp GCTAATGTGAGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCAGTAGGGTGTCCCAATaGAAGAGAGGCGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ANVSDGVSCSGLFPFQQASRVSQ*KRGVWP
Trigger: TGGCCAGACGCCTCTCTTTCATTGGGACACCCTACT...GGCCTGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGTAGGGTGTCCCAATaGAAGAGAGGCGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDSRVSQ*KRGVWP
Trigger: TGGCCAGACGCCTCTCTTTCATTGGGACACCCTACT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCATACCAGTTGATGACTaGGCATCTTGGTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPIPVDD*ASWWRW
Trigger: CCAGCGCCACCAAGATGCTCAGTCATCAACTGGTAT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTTTCCTCGGAGCTTCCTaGACTCCATGTGCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACFLGAS*TPCAAD
Trigger: GTCGGCGGCACATGGAGTTCAGGAAGCTCCGAGGAA...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR TCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACATCGTCAGACGACTCTaGCAGTTGCTTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDIVRRL*QLLPGA
Trigger: AGCCCCAGGAAGCAACTGTCAGAGTCGTCTGACGAT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp GCTAATGTGAGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCATCGTCAGACGACTCTaGCAGTTGCTTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ANVSDGVSCSGLFPFQQAIVRRL*QLLPGA
Trigger: AGCCCCAGGAAGCAACTGTCAGAGTCGTCTGACGAT...GGCCTGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTCCCAGGACCCTCGTCTaGTGGAGAACGGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACPRTLV*WRTELG
Trigger: CCCAAGTTCCGTTCTCCATCAGACGAGGGTCCTGGG...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR TCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGGAGGGGGCAGCCATTaGACAACTTTACGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDGGGSH*TTLREG
Trigger: CCCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTATGGGCTGGTACCACTaGAGCAGGACAACGGACGTC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVMGWYH*SRTTDV
Trigger: GACGTCCGTTGTCCTGCTTCAGTGGTACCAGCCCAT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAGAACTCTGAGAGGGTaGACATCAAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPRTLRG*TSKSGG
Trigger: GCCACCGCTCTTTGATGTGCACCCTCTCAGAGTTCT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGACGACTCTGACAGTTaGTTCCTGGGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVDDSDS*FLGLLL
Trigger: GAGCAGCAGCCCCAGGAAGCAACTGTCAGAGTCGTC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGACTCTGACAGTTaGTTCCTGGGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPDDSDS*FLGLLL
Trigger: GAGCAGCAGCCCCAGGAAGCAACTGTCAGAGTCGTC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CATGGGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGGCCCCCAGGAGCAGGTaGTGGTCCTTGGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: HGRNYKAVWCHSLGAGTLAPRSR*WSLVEG
Trigger: TCCCTCCACCAAGGACCAGCACCTGCTCCTGGGGGC...CAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTGAAGATGCCTTCCTCTaGCCCCAGGAGCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACEDAFL*PQEQVL
Trigger: CAGCACCTGCTCCTGGGGGCAGAGGAAGGCATCTTC...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAGCGATGGGGTTTCCTaGTCTGGTCTCTTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPSDGVS*SGLFPF
Trigger: GAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCCTAGAGCCCACACCTaGACTCCATGCTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDPRAHT*TPCFQK
Trigger: CTTCTGGAAGCATGGAGTGCAGGTGTGGGCTCTAGG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp TCAAGCTCCCGGGAGGGTGGGTTCCAGAGTGAGGGTTCTGAATGGGCGGTGAGGTATAAGGCTGTGTGGTaGCATTCATTGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSSREGGFQSEGSEWAVRYKAVW*HSLGAG
Trigger: ACCAGCTCCCAATGAATGGCACCACACAGCCTTATA...CCTCACCGCCCATTCAGAACCCTCACTCTGGAACCCACCCTCCCGGGAGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGGTAGGCCACGATGTTaGCGTGCCGGCAAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDGRPRC*RAGKFS
Trigger: TGAAAACTTGCCGGCACGCCAACATCGTGGCCTACC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAGTGTAGCCCCAATCTaGGCCGAGATGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPSVAPI*AEMPKS
Trigger: TGACTTTGGCATCTCGGCCCAGATTGGGGCTACACT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp TCGGGCTCCTCATCCTCAATGTCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCCCTCAATGTCCCCAATaGAGGGTCCTTTCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: SGSSSSMSPMEGPFPGFFPQCPQ*RVLSRD
Trigger: ATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGG...GAAGAATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGGATGAGGAGCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCCTCAATGTCCCCAATaGAGGGTCCTTTCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDPQCPQ*RVLSRD
Trigger: ATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACAGCAGTCTGCATCTaGGATCCCCAGAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDTAVCI*DPQRAG
Trigger: TCCAGCTCTCTGGGGATCCCAGATGCAGACTGCTGT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTGTTGGCTGGGGGTCTaGTCTCCATTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPCWLGV*SPFLGA
Trigger: AGCTCCGAGGAATGGAGACCAGACCCCCAGCCAACA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGATCCAGGATCAGGCCTCGAGCGAGCGGTGTTGGCTaGGGGTCTGGTCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: GPFPGFFSLSRRSRIRPRASGVG*GSGLHS
Trigger: GGAATGGAGACCAGACCCCCAGCCAACACCGCTCGC...TCGAGGCCTGATCCTGGATCTTCTTGACAAACTGAAGAATCCCGGGAAAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTGTCCTCTGCAGGGGTaGGGATGTCCACGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPCPLQG*GCPRRH
Trigger: ATGACGACGTGGACATCCCCACCCCTGCAGAGGACA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTCCCAGGAGCAGGTGCTaGTCCTTGGTGGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACPRSRC*SLVEGC
Trigger: ACATCCCTCCACCAAGGACCAGCACCTGCTCCTGGG...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTTCCAGCGTGGCCTCCTaGTCATTCCGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVSSVAS*SFRFRM
Trigger: CATCCTGAACCGGAATGACCAGGAGGCCACGCTGGA...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTCCAGCGTGGCCTCCTaGTCATTCCGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPSSVAS*SFRFRM
Trigger: CATCCTGAACCGGAATGACCAGGAGGCCACGCTGGA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGAGCATTTCCAGCGTaGCCTCCTGGTCATTCCGGT +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDRAFPA*PPGHSG
Trigger: ACCGGAATGACCAGGAGGCCACGCTGGAAATGCTCT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTACGCCCGGCAGCCTTTaGTGTCCTGGATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACTPGSL*CPGSWW
Trigger: CCACCAAGATCCAGGACACCAAAGGCTGCCGGGCGT...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTCCAAAGCGCACCGTGTaGAAGAGCACCGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACPKRTV*KSTDFP
Trigger: GGGGAAGTCGGTGCTCTTCCACACGGTGCGCTTTGG...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACATATCTTCCTCTACCTaGGTCACCTGCACGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDISSST*VTCTGP
Trigger: GGGACCCGTGCAGGTGACCCAGGTAGAGGAAGATAT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCACCGCTTCGGTCATaGGGATCTCAGGTGTGCGAA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVPPLRS*GSQVCE
Trigger: TTCGCACACCTGAGATCCCCATGACCGAAGCGGTGG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCCACCGCTTCGGTCATaGGGATCTCAGGTGTGCGAA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPPPLRS*GSQVCE
Trigger: TTCGCACACCTGAGATCCCCATGACCGAAGCGGTGG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAGTAGGATCATCCACTaGGCGTGTCTCCACCACTAC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPSRIIH*ACLHHY
Trigger: GTAGTGGTGGAGACACGCCCAGTGGATGATCCTACT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCACTAGTGTGTCTATaGGGGAGGGGGTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVPLVCL*GRGCKD
Trigger: GTCCTTGCACCCCCTCCCCCATAGACACACTAGTGG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCCACTAGTGTGTCTATaGGGGAGGGGGTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPPLVCL*GRGCKD
Trigger: GTCCTTGCACCCCCTCCCCCATAGACACACTAGTGG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCTCGGAACTTGGCCATaGCCTAAACGTAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPLGTWP*PKRKAA
Trigger: AGCAGCCTTACGTTTAGGCCATGGCCAAGTTCCGAG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000589130.5
ENST00000634456.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCTCTCCCTCGGAACTTaGCCATGGCCTAAACGTAAG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPLSLGT*PWPKRK
Trigger: CTTACGTTTAGGCCATGGCCAAGTTCCGAGGGAGAG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000589130.5
ENST00000634456.1
3UTR CAA 72 bp CATGGGAGGAATTATAAGGCTGTGTGGTGCCATTCATaGGGAGCTGGTACCTTGCCAGTAGGCGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: HGRNYKAVWCHS*GAGTLPVGGGG
Trigger: GCCCCCACCGCCTACTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR TCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCCCGGGGGTCTCTATTaGAAATGTCAGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPPGGLY*KCQGPR
Trigger: TCGTGGACCCTGACATTTTCAATAGAGACCCCCGGG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000591517.5
ENST00000634395.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCCGGGGGTCTCTATTaGAAATGTCAGGGTCCACGA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVPGGLY*KCQGPR
Trigger: TCGTGGACCCTGACATTTTCAATAGAGACCCCCGGG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000591517.5
ENST00000634395.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGCTAATCTGGAGCTCTaGCAGGGAGCCTGTCACTTG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVANLEL*QGACHL
Trigger: CAAGTGACAGGCTCCCTGTCAGAGCTCCAGATTAGC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGTAGGGTGTCCCAATaGAAGAGAGGCGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPSRVSQ*KRGVWP
Trigger: TGGCCAGACGCCTCTCTTTCATTGGGACACCCTACT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGTAGGGTGTCCCAATaGAAGAGAGGCGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVSRVSQ*KRGVWP
Trigger: TGGCCAGACGCCTCTCTTTCATTGGGACACCCTACT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACATACCAGTTGATGACTaGGCATCTTGGTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDIPVDD*ASWWRW
Trigger: CCAGCGCCACCAAGATGCTCAGTCATCAACTGGTAT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGGAGGGGGCAGCCATTaGACAACTTTACGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVGGGSH*TTLREG
Trigger: CCCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGGAGGGGGCAGCCATTaGACAACTTTACGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPGGGSH*TTLREG
Trigger: CCCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCATTCCGGTTCAGGATaGAGATGCCTTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVHSGSG*RCLPLP
Trigger: GGGCAGAGGAAGGCATCTTCATCCTGAACCGGAATG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCATTCCGGTTCAGGATaGAGATGCCTTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPHSGSG*RCLPLP
Trigger: GGGCAGAGGAAGGCATCTTCATCCTGAACCGGAATG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGATGAGGACATGCCATaGCCACTAGTGTGTCTATGG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPDEDMP*PLVCLW
Trigger: CCATAGACACACTAGTGGTCATGGCATGTCCTCATC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGGCAGGAGAATTGCTTaGACCTGGGAGGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVGRRIA*TWEEEV
Trigger: AACCTCCTCCTCCCAGGTTCAAGCAATTCTCCTGCC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR GCA 90 bp GGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGCTTCAGGGCCACAGCTaGCACTTCCGGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: GGIIRLCGAIHWELVPCQLQGHS*HFRSHP
Trigger: TGGATGGCTCCGGAAGTGGCAGCTGTGGCCCTGAAG...CTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGAACTCTGAGAGGGTaGACATCAAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDRTLRG*TSKSGG
Trigger: GCCACCGCTCTTTGATGTGCACCCTCTCAGAGTTCT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGGCAGCCGACCATTTaGCTTTTTCCTTCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDRQPTI*LFPSVG
Trigger: CCCGACTGAAGGAAAAAGGCAAATGGTCGGCTGCCT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTGACGACTCTGACAGTTaGTTCCTGGGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACDDSDS*FLGLLL
Trigger: GAGCAGCAGCCCCAGGAAGCAACTGTCAGAGTCGTC...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR GCA 90 bp GGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGAGGAGGTGTGTCCTCTaGAGGGGTGGGGATGTCCAC +
Preference number: 4 (lower is better)
Translates to: GGIIRLCGAIHWELVPCQRRCVL*RGGDVH
Trigger: GTGGACATCCCCACCCCTGCAGAGGACACACCTCCT...CTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp TCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGATCCAGGAGGAGGTGTGTCCTCTaGAGGGGTGGGGATGTCCAC +
Preference number: 4 (lower is better)
Translates to: SPMEGPFPGFFSLSRRSRRRCVL*RGGDVH
Trigger: GTGGACATCCCCACCCCTGCAGAGGACACACCTCCT...CCTGGATCTTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCCAGCAGGCCAAGGATaGTATGAGAATACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDPAGQG*YENTGG
Trigger: CCCACCTGTATTCTCATAGCATCCTTGGCCTGCTGG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCCTAGAGCCCACACCTaGACTCCATGCTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPPRAHT*TPCFQK
Trigger: CTTCTGGAAGCATGGAGTGCAGGTGTGGGCTCTAGG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGAGCCCACACCTaGACTCCATGCTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVPRAHT*TPCFQK
Trigger: CTTCTGGAAGCATGGAGTGCAGGTGTGGGCTCTAGG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAAGCTGACAGCAGTCTaGATCTGGGATCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDKLTAV*IWDPQR
Trigger: TCTCTGGGGATCCCAGATGCAGACTGCTGTCAGCTT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586296.5
ENST00000634814.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGGTAGGCCACGATGTTaGCGTGCCGGCAAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPGRPRC*RAGKFS
Trigger: TGAAAACTTGCCGGCACGCCAACATCGTGGCCTACC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGGTAGGCCACGATGTTaGCGTGCCGGCAAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVGRPRC*RAGKFS
Trigger: TGAAAACTTGCCGGCACGCCAACATCGTGGCCTACC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGTGTAGCCCCAATCTaGGCCGAGATGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDSVAPI*AEMPKS
Trigger: TGACTTTGGCATCTCGGCCCAGATTGGGGCTACACT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGCATCTTGGTGGCGCTaGGTCGTTTCTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVASWWR*VVSWDS
Trigger: AGAGTCCCAAGAAACGACCCAGCGCCACCAAGATGC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGCATCTTGGTGGCGCTaGGTCGTTTCTTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPASWWR*VVSWDS
Trigger: AGAGTCCCAAGAAACGACCCAGCGCCACCAAGATGC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCAATGTCCCCAATaGAGGGTCCTTTCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVPQCPQ*RVLSRD
Trigger: ATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCCTCAATGTCCCCAATaGAGGGTCCTTTCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPPQCPQ*RVLSRD
Trigger: ATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTACAGCAGTCTGCATCTaGGATCCCCAGAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPTAVCI*DPQRAG
Trigger: TCCAGCTCTCTGGGGATCCCAGATGCAGACTGCTGT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTACAGCAGTCTGCATCTaGGATCCCCAGAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVTAVCI*DPQRAG
Trigger: TCCAGCTCTCTGGGGATCCCAGATGCAGACTGCTGT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGATCCAGGATCAGGCCTCGAGCAGGTGCTGGTCCTTaGTGGAGGGATGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPFPGFFSLSRRSRIRPRAGAGP*WRDVSR
Trigger: CCTGGACACATCCCTCCACCAAGGACCAGCACCTGC...TCGAGGCCTGATCCTGGATCTTCTTGACAAACTGAAGAATCCCGGGAAAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTTCCAGCGTGGCCTCCTaGTCATTCCGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACSSVAS*SFRFRM
Trigger: CATCCTGAACCGGAATGACCAGGAGGCCACGCTGGA...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGAGCATTTCCAGCGTaGCCTCCTGGTCATTCCGGT +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPRAFPA*PPGHSG
Trigger: ACCGGAATGACCAGGAGGCCACGCTGGAAATGCTCT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACTGGGGTTTCCTGCTCTaGTCTCTTTCCGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDWGFLL*SLSVPA
Trigger: TGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCA...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTATATCTTCCTCTACCTaGGTCACCTGCACGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPISSST*VTCTGP
Trigger: GGGACCCGTGCAGGTGACCCAGGTAGAGGAAGATAT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTATATCTTCCTCTACCTaGGTCACCTGCACGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVISSST*VTCTGP
Trigger: GGGACCCGTGCAGGTGACCCAGGTAGAGGAAGATAT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGTAGGATCATCCACTaGGCGTGTCTCCACCACTAC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDSRIIH*ACLHHY
Trigger: GTAGTGGTGGAGACACGCCCAGTGGATGATCCTACT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGTGTATCTTCTTCTGTaGGTGCAAATAGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPVYLLL*VQIGQS
Trigger: GGACTGGCCTATTTGCACTCACAGAAGAAGATACAC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTATACCAGTTGATGACTaGGCATCTTGGTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPIPVDD*ASWWRW
Trigger: CCAGCGCCACCAAGATGCTCAGTCATCAACTGGTAT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTATCGTCAGACGACTCTaGCAGTTGCTTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACIVRRL*QLLPGA
Trigger: AGCCCCAGGAAGCAACTGTCAGAGTCGTCTGACGAT...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR TCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTGGAGGGGGCAGCCATTaGACAACTTTACGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACGGGSH*TTLREG
Trigger: CCCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCC...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR TCA 90 bp CTCAATGTCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGCGGTGGGGGCTAATGTaGGCGATGGGGTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LNVPNGGSFPGILQFVKKRWGLM*AMGFPA
Trigger: AGCAGGAAACCCCATCGCTCACATTAGCCCCCACCG...CTTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGACATTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGCCACGATGTTGGCGTaGCGGCAAGTTTTCAATATG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDATMLA*RQVFNM
Trigger: CATATTGAAAACTTGCCGGCACGCCAACATCGTGGC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCCCCACAGAATTCCATaGAGATCCAGAGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPPHRIP*RSRVSA
Trigger: TGCAGAAACTCTGGATCTGCATGGAATTCTGTGGGG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
54% GC, longest homopolymer 9 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGGCAGCCGACCATTTaGCTTTTTCCTTCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVRQPTI*LFPSVG
Trigger: CCCGACTGAAGGAAAAAGGCAAATGGTCGGCTGCCT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGGCAGCCGACCATTTaGCTTTTTCCTTCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPRQPTI*LFPSVG
Trigger: CCCGACTGAAGGAAAAAGGCAAATGGTCGGCTGCCT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCCAGCAGGCCAAGGATaGTATGAGAATACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPPAGQG*YENTGG
Trigger: CCCACCTGTATTCTCATAGCATCCTTGGCCTGCTGG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCAGCAGGCCAAGGATaGTATGAGAATACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVPAGQG*YENTGG
Trigger: CCCACCTGTATTCTCATAGCATCCTTGGCCTGCTGG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGCGATGGGGTTTCCTaGTCTGGTCTCTTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVSDGVS*SGLFPF
Trigger: GAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGCGATGGGGTTTCCTaGTCTGGTCTCTTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPSDGVS*SGLFPF
Trigger: GAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAAGCTGACAGCAGTCTaGATCTGGGATCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVKLTAV*IWDPQR
Trigger: TCTCTGGGGATCCCAGATGCAGACTGCTGTCAGCTT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586296.5
ENST00000634814.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGTGTAGCCCCAATCTaGGCCGAGATGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVSVAPI*AEMPKS
Trigger: TGACTTTGGCATCTCGGCCCAGATTGGGGCTACACT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTCCTCAATGTCCCCAATaGAGGGTCCTTTCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACPQCPQ*RVLSRD
Trigger: ATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGG...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp CATGGGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGAGAGAGCTGGAGCGGTaGGTGGATCTGATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: HGRNYKAVWCHSLGAGTLRELER*VDLIRR
Trigger: TCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCT...CAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCAAGGATGCTATGAGAATACAGGTTGTCCTCTGCAGGGGTaGGGATGTCCACGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: LLWSLSVPAGQGCYENTGCPLQG*GCPRRH
Trigger: ATGACGACGTGGACATCCCCACCCCTGCAGAGGACA...ACCTGTATTCTCATAGCATCCTTGGCCTGCTGGAACGGAAAGAGACCAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp GGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGTCCAGCGTGGCCTCCTaGTCATTCCGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: GGIIRLCGAIHWELVPCQSSVAS*SFRFRM
Trigger: CATCCTGAACCGGAATGACCAGGAGGCCACGCTGGA...CTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTAGAGCATTTCCAGCGTaGCCTCCTGGTCATTCCGGT +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACRAFPA*PPGHSG
Trigger: ACCGGAATGACCAGGAGGCCACGCTGGAAATGCTCT...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTGGGGTTTCCTGCTCTaGTCTCTTTCCGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPWGFLL*SLSVPA
Trigger: TGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTTGGGGTTTCCTGCTCTaGTCTCTTTCCGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVWGFLL*SLSVPA
Trigger: TGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCA...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCTGGTGTCCTGGATCTTaGTGGAAACCATGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPWCPGS*WKPCSS
Trigger: GGAAGAACATGGTTTCCACCAAGATCCAGGACACCA...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGCAGGAATTTGTTCATaGGCTGGTACCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPAGICS*AGTTEA
Trigger: TGCTTCAGTGGTACCAGCCCATGAACAAATTCCTGC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTATATCTTCCTCTACCTaGGTCACCTGCACGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACISSST*VTCTGP
Trigger: GGGACCCGTGCAGGTGACCCAGGTAGAGGAAGATAT...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGTAGGATCATCCACTaGGCGTGTCTCCACCACTAC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPSRIIH*ACLHHY
Trigger: GTAGTGGTGGAGACACGCCCAGTGGATGATCCTACT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGTAGGATCATCCACTaGGCGTGTCTCCACCACTAC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVSRIIH*ACLHHY
Trigger: GTAGTGGTGGAGACACGCCCAGTGGATGATCCTACT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCTCGGAACTTGGCCATaGCCTAAACGTAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPLGTWP*PKRKAA
Trigger: AGCAGCCTTACGTTTAGGCCATGGCCAAGTTCCGAG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000589130.5
ENST00000634456.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCTCTCCCTCGGAACTTaGCCATGGCCTAAACGTAAG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPLSLGT*PWPKRK
Trigger: CTTACGTTTAGGCCATGGCCAAGTTCCGAGGGAGAG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000589130.5
ENST00000634456.1
CDS-3UTR TCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCATGAGGATTTCCTTCTaGAGGGTGGAGACATCATCA +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPMRISF*RVETSS
Trigger: TGATGATGTCTCCACCCTTCAGAAGGAAATCCTCAT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGTGTATCTTCTTCTGTaGGTGCAAATAGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDVYLLL*VQIGQS
Trigger: GGACTGGCCTATTTGCACTCACAGAAGAAGATACAC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGATGAGGACATGCCATaGCCACTAGTGTGTCTATGG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPDEDMP*PLVCLW
Trigger: CCATAGACACACTAGTGGTCATGGCATGTCCTCATC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGATGAGGACATGCCATaGCCACTAGTGTGTCTATGG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVDEDMP*PLVCLW
Trigger: CCATAGACACACTAGTGGTCATGGCATGTCCTCATC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGCCACGATGTTGGCGTaGCGGCAAGTTTTCAATATG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVATMLA*RQVFNM
Trigger: CATATTGAAAACTTGCCGGCACGCCAACATCGTGGC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCCCCACAGAATTCCATaGAGATCCAGAGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDPHRIP*RSRVSA
Trigger: TGCAGAAACTCTGGATCTGCATGGAATTCTGTGGGG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCTTTCCTTCTGAAGGGTaGAGACATCATCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPFPSEG*RHHHQA
Trigger: AGCCTGATGATGATGTCTCCACCCTTCAGAAGGAAA...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTAGTGTAGCCCCAATCTaGGCCGAGATGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACSVAPI*AEMPKS
Trigger: TGACTTTGGCATCTCGGCCCAGATTGGGGCTACACT...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp GGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGATCCAGGATCAGGCCTCGAACAGCAGTCTGCATCTaGGATCCCCAGAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GPFPGFFSLSRRSRIRPRTAVCI*DPQRAG
Trigger: TCCAGCTCTCTGGGGATCCCAGATGCAGACTGCTGT...TCGAGGCCTGATCCTGGATCTTCTTGACAAACTGAAGAATCCCGGGAAAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CCTGGATCTTGGTGGAAACCATGTTCTTCCTGGAGAATAGGTAGGTGTGAAGGGTGTTGGCTGGGGGTCTaGTCTCCATTCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGSWWKPCSSWRIGRCEGCWLGV*SPFLGA
Trigger: AGCTCCGAGGAATGGAGACCAGACCCCCAGCCAACA...CCCTTCACACCTACCTATTCTCCAGGAAGAACATGGTTTCCACCAAGATCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CTCAATGTCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGTCCAGCGTGGCCTCCTaGTCATTCCGGTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: LNVPNGGSFPGILQFVKKSSVAS*SFRFRM
Trigger: CATCCTGAACCGGAATGACCAGGAGGCCACGCTGGA...CTTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGACATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTTGGGGTTTCCTGCTCTaGTCTCTTTCCGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACWGFLL*SLSVPA
Trigger: TGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCA...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCTGTCCTGGATCTTGGTaGAAACCATGTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPCPGSW*KPCSSL
Trigger: CAAGGAAGAACATGGTTTCCACCAAGATCCAGGACA...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACTGGTGTCCTGGATCTTaGTGGAAACCATGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDWCPGS*WKPCSS
Trigger: GGAAGAACATGGTTTCCACCAAGATCCAGGACACCA...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTAGTAGGATCATCCACTaGGCGTGTCTCCACCACTAC +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACSRIIH*ACLHHY
Trigger: GTAGTGGTGGAGACACGCCCAGTGGATGATCCTACT...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR TCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACATGAGGATTTCCTTCTaGAGGGTGGAGACATCATCA +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDMRISF*RVETSS
Trigger: TGATGATGTCTCCACCCTTCAGAAGGAAATCCTCAT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGTGTATCTTCTTCTGTaGGTGCAAATAGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPVYLLL*VQIGQS
Trigger: GGACTGGCCTATTTGCACTCACAGAAGAAGATACAC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR TCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGTGTATCTTCTTCTGTaGGTGCAAATAGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVVYLLL*VQIGQS
Trigger: GGACTGGCCTATTTGCACTCACAGAAGAAGATACAC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCCCCACAGAATTCCATaGAGATCCAGAGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPPHRIP*RSRVSA
Trigger: TGCAGAAACTCTGGATCTGCATGGAATTCTGTGGGG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCCCACAGAATTCCATaGAGATCCAGAGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVPHRIP*RSRVSA
Trigger: TGCAGAAACTCTGGATCTGCATGGAATTCTGTGGGG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR GCA 90 bp GGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGATCCAGGATCAGGCCTCGACCAGCAGGCCAAGGATaGTATGAGAATACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPFPGFFSLSRRSRIRPRPAGQG*YENTGG
Trigger: CCCACCTGTATTCTCATAGCATCCTTGGCCTGCTGG...TCGAGGCCTGATCCTGGATCTTCTTGACAAACTGAAGAATCCCGGGAAAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp TCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGATCCAGGAGCGATGGGGTTTCCTaGTCTGGTCTCTTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: SPMEGPFPGFFSLSRRSRSDGVS*SGLFPF
Trigger: GAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCT...CCTGGATCTTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACTTTCCTTCTGAAGGGTaGAGACATCATCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDFPSEG*RHHHQA
Trigger: AGCCTGATGATGATGTCTCCACCCTTCAGAAGGAAA...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACTGTCCTGGATCTTGGTaGAAACCATGTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDCPGSW*KPCSSL
Trigger: CAAGGAAGAACATGGTTTCCACCAAGATCCAGGACA...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTTGGTGTCCTGGATCTTaGTGGAAACCATGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVWCPGS*WKPCSS
Trigger: GGAAGAACATGGTTTCCACCAAGATCCAGGACACCA...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTGGTGTCCTGGATCTTaGTGGAAACCATGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPWCPGS*WKPCSS
Trigger: GGAAGAACATGGTTTCCACCAAGATCCAGGACACCA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGCAGGAATTTGTTCATaGGCTGGTACCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVAGICS*AGTTEA
Trigger: TGCTTCAGTGGTACCAGCCCATGAACAAATTCCTGC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR TCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTATGAGGATTTCCTTCTaGAGGGTGGAGACATCATCA +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVMRISF*RVETSS
Trigger: TGATGATGTCTCCACCCTTCAGAAGGAAATCCTCAT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTTTCCTTCTGAAGGGTaGAGACATCATCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPFPSEG*RHHHQA
Trigger: AGCCTGATGATGATGTCTCCACCCTTCAGAAGGAAA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTTTTCCTTCTGAAGGGTaGAGACATCATCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVFPSEG*RHHHQA
Trigger: AGCCTGATGATGATGTCTCCACCCTTCAGAAGGAAA...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CCA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTGTCCTGGATCTTGGTaGAAACCATGTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPCPGSW*KPCSSL
Trigger: CAAGGAAGAACATGGTTTCCACCAAGATCCAGGACA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTTGTCCTGGATCTTGGTaGAAACCATGTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVCPGSW*KPCSSL
Trigger: CAAGGAAGAACATGGTTTCCACCAAGATCCAGGACA...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTTGGTGTCCTGGATCTTaGTGGAAACCATGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACWCPGS*WKPCSS
Trigger: GGAAGAACATGGTTTCCACCAAGATCCAGGACACCA...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTGCAGGAATTTGTTCATaGGCTGGTACCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACAGICS*AGTTEA
Trigger: TGCTTCAGTGGTACCAGCCCATGAACAAATTCCTGC...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CCA 90 bp GCTAATGTGAGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCAAACCATGTTCTTCCTaGAGAATAGGTAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: ANVSDGVSCSGLFPFQQAKPCSS*RIGRCE
Trigger: TTCACACCTACCTATTCTCCAGGAAGAACATGGTTT...GGCCTGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR GCA 90 bp CTCAATGTCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGTATAAGGCTGTGTGGTaGCATTCATTGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LNVPNGGSFPGILQFVKKYKAVW*HSLGAG
Trigger: ACCAGCTCCCAATGAATGGCACCACACAGCCTTATA...CTTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGACATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CCTCAATGTCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAAATTATAAGGCTGTGTaGTGCCATTCATTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PQCPQWRVLSRDSSVCQENYKAV*CHSLGA
Trigger: AGCTCCCAATGAATGGCACCACACAGCCTTATAATT...TTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CATGGGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGAATTATAAGGCTGTGTaGTGCCATTCATTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HGRNYKAVWCHSLGAGTLNYKAV*CHSLGA
Trigger: AGCTCCCAATGAATGGCACCACACAGCCTTATAATT...CAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CCA 90 bp CTGCTCTGGTCTCTTTCCGTTCCAGCAGGCCAAGGATGCTATGAGAATACAGGTAAACCATGTTCTTCCTaGAGAATAGGTAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LLWSLSVPAGQGCYENTGKPCSS*RIGRCE
Trigger: TTCACACCTACCTATTCTCCAGGAAGAACATGGTTT...ACCTGTATTCTCATAGCATCCTTGGCCTGCTGGAACGGAAAGAGACCAGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp CCGGACCAGCACCCCCGGGCTCAGCTGCCCATCATCCCCCATGCTCCCAGGACCGGCAGAAGTGGGGGCTaGTCAAGCTCCCGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: PDQHPRAQLPIIPHAPRTGRSGG*SSSREG
Trigger: ACCCTCCCGGGAGCTTGACAAGCCCCCACTTCTGCC...GGTCCTGGGAGCATGGGGGATGATGGGCAGCTGAGCCCGGGGGTGCTGGTCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS CCA 90 bp AACGTAAGGCTGCTGCGTGCATTCCCGCAGAGCTCCGTGGCCTCATaGCCGCGCGCAATACAACGCGCGCGCACGCCGCCAGAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: NVRLLRAFPQSSVAS*PRAIQRARTPPELR
Trigger: CCGGAGCTCTGGCGGCGTGCGCGCGCGTTGTATTGCGCGCGGCCATGAGGCCACGGAGCTCTGCGGGAATGCACGCAGCAGCCTTACGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589130.5
ENST00000634456.1
CDS-3UTR CAA 90 bp CTCCTGAGGTCTCGAGGAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCTTGGGAGCTGGTACCTaGCCAGTAGGCGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: LLRSRGGCRRAVLAGGLVLGAGT*PVGGGG
Trigger: GCCCCCACCGCCTACTGGCAAGGTACCAGCTCCCAA...GACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTCCTCGAGACCTCAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS GCA 90 bp GTTCATGGGCTGGTACCACTGAAGCAGGACAACGGACGTCTCCAATaGACCGCACAGGAACGGGCCCCCAGAGCTCGCACCCTCCGCCAC +
Preference number: 5 (lower is better)
Translates to: VHGLVPLKQDNGRLQ*TAQERAPRARTLRH
Trigger: GTGGCGGAGGGTGCGAGCTCTGGGGGCCCGTTCCTGTGCGGTGCATTGGAGACGTCCGTTGTCCTGCTTCAGTGGTACCAGCCCATGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000591921.1
ENST00000634395.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
CDS-3UTR CAA 90 bp TCTGCATCTGGGATCCCCAGAGAGCTGGAGCGGTGGGTGGATCTGATCCGCCGATGTAGGCGAGCGGTGTaGGCTGGGGGTCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SASGIPRELERWVDLIRRCRRAV*AGGLVS
Trigger: GGAGACCAGACCCCCAGCCAACACCGCTCGCCTACA...TCGGCGGATCAGATCCACCCACCGCTCCAGCTCTCTGGGGATCCCAGATGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCAGGACGGGGGCTGTTaGGTGGGGGCCCACTGGCAC +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPQDGGC*VGAHWH
Trigger: GTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 26 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp CTCCTGAGGTCTCGAGGAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCAGCAGGTGCTGGTCCTaGGTGGAGGGATGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: LLRSRGGCRRAVLAGGLVSRCWS*VEGCVQ
Trigger: CTGGACACATCCCTCCACCAAGGACCAGCACCTGCT...GACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTCCTCGAGACCTCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCAGGACGGGGGCTGTTaGGTGGGGGCCCACTGGCAC +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDQDGGC*VGAHWH
Trigger: GTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS GCA 90 bp CTCTCCCTCGGAACTTGGCCATGGCCTAAACGTAAGGCTGCTGCGTaGATTCCCGCAGAGCTCCGTGGCCTCATGGCCGCGCGCAATACA +
Preference number: 5 (lower is better)
Translates to: LSLGTWPWPKRKAAA*IPAELRGLMAARNT
Trigger: TGTATTGCGCGCGGCCATGAGGCCACGGAGCTCTGCGGGAATGCACGCAGCAGCCTTACGTTTAGGCCATGGCCAAGTTCCGAGGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589130.5
ENST00000634456.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCTGTAGGCGAGCGGTGTaGGCTGGGGGTCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPCRRAV*AGGLVS
Trigger: GGAGACCAGACCCCCAGCCAACACCGCTCGCCTACA...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCAGGACGGGGGCTGTTaGGTGGGGGCCCACTGGCAC +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPQDGGC*VGAHWH
Trigger: GTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGGCAGAAGTGGGGGCTaGTCAAGCTCCCGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPGRSGG*SSSREG
Trigger: ACCCTCCCGGGAGCTTGACAAGCCCCCACTTCTGCC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS TCA 90 bp AAAGCAATGCCCGTTACCCTTGGGGATCACTTGAGTTTCCACCCCTaGTCCTGGGCTCTCCCGTCCCTGCACAGACCCACGGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: KAMPVTLGDHLSFHP*SWALPSLHRPTAST
Trigger: GGTGGAGGCCGTGGGTCTGTGCAGGGACGGGAGAGCCCAGGATCAGGGGTGGAAACTCAAGTGATCCCCAAGGGTAACGGGCATTGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588938.1
ENST00000634660.1
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTCAGGACGGGGGCTGTTaGGTGGGGGCCCACTGGCAC +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACQDGGC*VGAHWH
Trigger: GTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTG...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp GAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCTCCATTCCTCGGAGCTCGGAGGGGGCAGCCATaGAACAACTTTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: EAVGERCWLGVWSPFLGARRGQP*NNFTRR
Trigger: CCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCCG...AGCTCCGAGGAATGGAGACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp GAGGCTGTAGGCGAGCGGTGTTGGCTGGGGGTCTGGTCTCCATTCCTCGGAGCTGTGTGGTGCCATTCATaGGGAGCTGGTACCTTGCCA +
Preference number: 5 (lower is better)
Translates to: EAVGERCWLGVWSPFLGAVWCHS*GAGTLP
Trigger: TGGCAAGGTACCAGCTCCCAATGAATGGCACCACAC...AGCTCCGAGGAATGGAGACCAGACCCCCAGCCAACACCGCTCGCCTACAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTGTAGGCGAGCGGTGTaGGCTGGGGGTCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPCRRAV*AGGLVS
Trigger: GGAGACCAGACCCCCAGCCAACACCGCTCGCCTACA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTTGTAGGCGAGCGGTGTaGGCTGGGGGTCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVCRRAV*AGGLVS
Trigger: GGAGACCAGACCCCCAGCCAACACCGCTCGCCTACA...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGGCAGAAGTGGGGGCTaGTCAAGCTCCCGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPGRSGG*SSSREG
Trigger: ACCCTCCCGGGAGCTTGACAAGCCCCCACTTCTGCC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGGCAGAAGTGGGGGCTaGTCAAGCTCCCGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVGRSGG*SSSREG
Trigger: ACCCTCCCGGGAGCTTGACAAGCCCCCACTTCTGCC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAGCAGGTGCTGGTCCTaGGTGGAGGGATGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPSRCWS*VEGCVQ
Trigger: CTGGACACATCCCTCCACCAAGGACCAGCACCTGCT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCACGCCCGGCAGCCTTaGGTGTCCTGGATCTTGGTG +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDHARQP*VSWILV
Trigger: CACCAAGATCCAGGACACCAAAGGCTGCCGGGCGTG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp TGCTGGTCCTTGGTGGAGGGATGTGTCCAGGCGGCCGTGCTGTGGATCCGGAGGCCGGGATTCTTCAGTTaGTCAAGAAGATCCAGGATC +
Preference number: 5 (lower is better)
Translates to: CWSLVEGCVQAAVLWIRRPGFFS*SRRSRI
Trigger: GATCCTGGATCTTCTTGACAAACTGAAGAATCCCGG...CCTCCGGATCCACAGCACGGCCGCCTGGACACATCCCTCCACCAAGGACCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTTGTAGGCGAGCGGTGTaGGCTGGGGGTCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACCRRAV*AGGLVS
Trigger: GGAGACCAGACCCCCAGCCAACACCGCTCGCCTACA...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp CCTCAATGTCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAACAGGACGGGGGCTGTTaGGTGGGGGCCCACTGGCAC +
Preference number: 5 (lower is better)
Translates to: PQCPQWRVLSRDSSVCQEQDGGC*VGAHWH
Trigger: GTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTG...TTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp CATGGGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCAGGACGGGGGCTGTTaGGTGGGGGCCCACTGGCAC +
Preference number: 5 (lower is better)
Translates to: HGRNYKAVWCHSLGAGTLQDGGC*VGAHWH
Trigger: GTGCCAGTGGGCCCCCACCAAACAGCCCCCGTCCTG...CAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTGGCAGAAGTGGGGGCTaGTCAAGCTCCCGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACGRSGG*SSSREG
Trigger: ACCCTCCCGGGAGCTTGACAAGCCCCCACTTCTGCC...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGCAGGTGCTGGTCCTaGGTGGAGGGATGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDSRCWS*VEGCVQ
Trigger: CTGGACACATCCCTCCACCAAGGACCAGCACCTGCT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCACGCCCGGCAGCCTTaGGTGTCCTGGATCTTGGTG +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVHARQP*VSWILV
Trigger: CACCAAGATCCAGGACACCAAAGGCTGCCGGGCGTG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCACGCCCGGCAGCCTTaGGTGTCCTGGATCTTGGTG +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPHARQP*VSWILV
Trigger: CACCAAGATCCAGGACACCAAAGGCTGCCGGGCGTG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS TCA 90 bp AGCACCTGCCGGACAAGCAGGAATTTGTTCATGGGCTGGTACCACTaGAGCAGGACAACGGACGTCTCCAATGCACCGCACAGGAACGGG +
Preference number: 5 (lower is better)
Translates to: STCRTSRNLFMGWYH*SRTTDVSNAPHRNG
Trigger: CCCGTTCCTGTGCGGTGCATTGGAGACGTCCGTTGTCCTGCTTCAGTGGTACCAGCCCATGAACAAATTCCTGCTTGTCCGGCAGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000591921.1
ENST00000634395.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
CDS CCA 90 bp CTGACCTCCAACCATAGCTGGGGAGAAAGCAATGCCCGTTACCCTTaGGGATCACTTGAGTTTCCACCCCTGATCCTGGGCTCTCCCGTC +
Preference number: 5 (lower is better)
Translates to: LTSNHSWGESNARYP*GSLEFPPLILGSPV
Trigger: GACGGGAGAGCCCAGGATCAGGGGTGGAAACTCAAGTGATCCCCAAGGGTAACGGGCATTGCTTTCTCCCCAGCTATGGTTGGAGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588938.1
ENST00000634660.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCTCCCGGGGGTCTCTATaGAAAATGTCAGGGTCCACG +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPSRGSL*KMSGST
Trigger: CGTGGACCCTGACATTTTCAATAGAGACCCCCGGGA...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000591517.5
ENST00000634395.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCAGGGAGCCTGTCACTaGGTAGATGTCCTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPQGACH*VDVLER
Trigger: TCTCTCCAGGACATCTACCAAGTGACAGGCTCCCTG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGCGCTGGGTCGTTTCTaGGGACTCTTAGTCAGAGTG +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPALGRF*GLLVRV
Trigger: CACTCTGACTAAGAGTCCCAAGAAACGACCCAGCGC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGTGTAGGCGAGCGGTGTaGGCTGGGGGTCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GGIIRLCGAIHWELVPCQCRRAV*AGGLVS
Trigger: GGAGACCAGACCCCCAGCCAACACCGCTCGCCTACA...CTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp GGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGGGCAGAAGTGGGGGCTaGTCAAGCTCCCGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: GGIIRLCGAIHWELVPCQGRSGG*SSSREG
Trigger: ACCCTCCCGGGAGCTTGACAAGCCCCCACTTCTGCC...CTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCGGAGGGGGCAGCCATaGAACAACTTTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPRRGQP*NNFTRR
Trigger: CCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCCG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGCAGGTGCTGGTCCTaGGTGGAGGGATGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVSRCWS*VEGCVQ
Trigger: CTGGACACATCCCTCCACCAAGGACCAGCACCTGCT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGCAGGTGCTGGTCCTaGGTGGAGGGATGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPSRCWS*VEGCVQ
Trigger: CTGGACACATCCCTCCACCAAGGACCAGCACCTGCT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAAACCATGTTCTTCCTaGCCAGTAGGCGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDKPCSS*PVGGGG
Trigger: GCCCCCACCGCCTACTGGCAAGGAAGAACATGGTTT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTCACGCCCGGCAGCCTTaGGTGTCCTGGATCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACHARQP*VSWILV
Trigger: CACCAAGATCCAGGACACCAAAGGCTGCCGGGCGTG...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp AAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGTAGGCGGTGGGGTGTGGTGCCATTCATaGGGAGCTGGTACCTTGCCA +
Preference number: 5 (lower is better)
Translates to: KAVWCHSLGAGTLPVGGGVWCHS*GAGTLP
Trigger: TGGCAAGGTACCAGCTCCCAATGAATGGCACCACAC...CCCACCGCCTACTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS TCA 90 bp GTGGAAACCATGTTCTTCCTTGCCAGTAGGCGGTGGGGGCTAATGTaGGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGTTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VETMFFLASRRWGLM*AMGFPALVSFRSSR
Trigger: CCTGCTGGAACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGCCCCCACCGCCTACTGGCAAGGAAGAACATGGTTTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000591921.1
ENST00000634395.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
CDS TCA 90 bp CCTACACCCCCAGACCACCTTGATGTCCCTGTGTATCTTCTTCTGTaGGTGCAAATAGGCCAGTCCCTGGGGAGAAGGGTGGACAAGGGG +
Preference number: 5 (lower is better)
Translates to: PTPPDHLDVPVYLLL*VQIGQSLGRRVDKG
Trigger: CCCCTTGTCCACCCTTCTCCCCAGGGACTGGCCTATTTGCACTCACAGAAGAAGATACACAGGGACATCAAGGTGGTCTGGGGGTGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591707.1
ENST00000635447.1
CDS CCA 90 bp TCGGCAGTGGGAACAGCACCTGCCGGACAAGCAGGAATTTGTTCATaGGCTGGTACCACTGAAGCAGGACAACGGACGTCTCCAATGCAC +
Preference number: 5 (lower is better)
Translates to: SAVGTAPAGQAGICS*AGTTEAGQRTSPMH
Trigger: GTGCATTGGAGACGTCCGTTGTCCTGCTTCAGTGGTACCAGCCCATGAACAAATTCCTGCTTGTCCGGCAGGTGCTGTTCCCACTGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000591921.1
ENST00000634395.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACTCCCGGGGGTCTCTATaGAAAATGTCAGGGTCCACG +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDSRGSL*KMSGST
Trigger: CGTGGACCCTGACATTTTCAATAGAGACCCCCGGGA...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000591517.5
ENST00000634395.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCAGGGAGCCTGTCACTaGGTAGATGTCCTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDQGACH*VDVLER
Trigger: TCTCTCCAGGACATCTACCAAGTGACAGGCTCCCTG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCACCTCCCCAGCATCATaGATGAGGATGTTAGCTCCC +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPTSPAS*MRMLAP
Trigger: GGGAGCTAACATCCTCATCAATGATGCTGGGGAGGT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCATGTCACACAGCTCATaGTATCCTCCCTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPMSHSS*YPPFRA
Trigger: GGCCCTGAAGGGAGGATACAATGAGCTGTGTGACAT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCAAGGCAGCCGACCATTaGCCTTTTTCCTTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPKAADH*PFSFSR
Trigger: CCGACTGAAGGAAAAAGGCAAATGGTCGGCTGCCTT...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGCGCTGGGTCGTTTCTaGGGACTCTTAGTCAGAGTG +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDALGRF*GLLVRV
Trigger: CACTCTGACTAAGAGTCCCAAGAAACGACCCAGCGC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCGGAGGGGGCAGCCATaGAACAACTTTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDRRGQP*NNFTRR
Trigger: CCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCCG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTAGCAGGTGCTGGTCCTaGGTGGAGGGATGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACSRCWS*VEGCVQ
Trigger: CTGGACACATCCCTCCACCAAGGACCAGCACCTGCT...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAAACCATGTTCTTCCTaGCCAGTAGGCGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVKPCSS*PVGGGG
Trigger: GCCCCCACCGCCTACTGGCAAGGAAGAACATGGTTT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp TCAAGCTCCCGGGAGGGTGGGTTCCAGAGTGAGGGTTCTGAATGGGCGGTGAGGTTGGTGTCCTGGATCTaGGTGGAAACCATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SSSREGGFQSEGSEWAVRLVSWI*VETMFF
Trigger: GAAGAACATGGTTTCCACCAAGATCCAGGACACCAA...CCTCACCGCCCATTCAGAACCCTCACTCTGGAACCCACCCTCCCGGGAGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCGGACAAGCAGGAATTaGTTCATGGGCTGGTACCAC +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPRTSRN*FMGWYH
Trigger: GTGGTACCAGCCCATGAACAAATTCCTGCTTGTCCG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp CATGGGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGTTGGGAGCTGGTACCTaGCCAGTAGGCGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: HGRNYKAVWCHSLGAGTLLGAGT*PVGGGG
Trigger: GCCCCCACCGCCTACTGGCAAGGTACCAGCTCCCAA...CAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTaGGCGTGTCTCCACCACTACAGGCCTGTAATCCCAGCTACTCGG +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIH*ACLHHYRPVIPATR
Trigger: CCGAGTAGCTGGGATTACAGGCCTGTAGTGGTGGAGACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTTCCCGGGGGTCTCTATaGAAAATGTCAGGGTCCACG +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVSRGSL*KMSGST
Trigger: CGTGGACCCTGACATTTTCAATAGAGACCCCCGGGA...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000591517.5
ENST00000634395.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCAGGGAGCCTGTCACTaGGTAGATGTCCTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVQGACH*VDVLER
Trigger: TCTCTCCAGGACATCTACCAAGTGACAGGCTCCCTG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCAGGGAGCCTGTCACTaGGTAGATGTCCTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPQGACH*VDVLER
Trigger: TCTCTCCAGGACATCTACCAAGTGACAGGCTCCCTG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCTCCCCAGCATCATaGATGAGGATGTTAGCTCCC +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDTSPAS*MRMLAP
Trigger: GGGAGCTAACATCCTCATCAATGATGCTGGGGAGGT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACATGTCACACAGCTCATaGTATCCTCCCTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDMSHSS*YPPFRA
Trigger: GGCCCTGAAGGGAGGATACAATGAGCTGTGTGACAT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp TCGGGCTCCTCATCCTCAATGTCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCATGTCACACAGCTCATaGTATCCTCCCTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SGSSSSMSPMEGPFPGFFMSHSS*YPPFRA
Trigger: GGCCCTGAAGGGAGGATACAATGAGCTGTGTGACAT...GAAGAATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGGATGAGGAGCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAAGGCAGCCGACCATTaGCCTTTTTCCTTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDKAADH*PFSFSR
Trigger: CCGACTGAAGGAAAAAGGCAAATGGTCGGCTGCCTT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGTGACTTTGATGAAGTaGTGGAAGGCAGCCGACCAT +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPVTLMK*WKAADH
Trigger: ATGGTCGGCTGCCTTCCACAACTTCATCAAAGTCAC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGCGCTGGGTCGTTTCTaGGGACTCTTAGTCAGAGTG +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVALGRF*GLLVRV
Trigger: CACTCTGACTAAGAGTCCCAAGAAACGACCCAGCGC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGCGCTGGGTCGTTTCTaGGGACTCTTAGTCAGAGTG +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPALGRF*GLLVRV
Trigger: CACTCTGACTAAGAGTCCCAAGAAACGACCCAGCGC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCGGAGGGGGCAGCCATaGAACAACTTTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPRRGQP*NNFTRR
Trigger: CCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCCG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTAAACCATGTTCTTCCTaGCCAGTAGGCGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACKPCSS*PVGGGG
Trigger: GCCCCCACCGCCTACTGGCAAGGAAGAACATGGTTT...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCGGACAAGCAGGAATTaGTTCATGGGCTGGTACCAC +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDRTSRN*FMGWYH
Trigger: GTGGTACCAGCCCATGAACAAATTCCTGCTTGTCCG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS CCA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTaGGCGTGTCTCCACCACTACAGGCCTGTAAACCCAGCTACTTGG +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIH*ACLHHYRPVNPATW
Trigger: CCAAGTAGCTGGGTTTACAGGCCTGTAGTGGTGGAGACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593196.1
ENST00000635246.1
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTTCCCGGGGGTCTCTATaGAAAATGTCAGGGTCCACG +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACSRGSL*KMSGST
Trigger: CGTGGACCCTGACATTTTCAATAGAGACCCCCGGGA...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGGTCCCCTGACACCTaGTCTCGAGCCTTAAAGACT +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPRSPDT*SRALKT
Trigger: AGTCTTTAAGGCTCGAGACAAGGTGTCAGGGGACCT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTACCTCCCCAGCATCATaGATGAGGATGTTAGCTCCC +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPTSPAS*MRMLAP
Trigger: GGGAGCTAACATCCTCATCAATGATGCTGGGGAGGT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTACCTCCCCAGCATCATaGATGAGGATGTTAGCTCCC +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVTSPAS*MRMLAP
Trigger: GGGAGCTAACATCCTCATCAATGATGCTGGGGAGGT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTATGTCACACAGCTCATaGTATCCTCCCTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVMSHSS*YPPFRA
Trigger: GGCCCTGAAGGGAGGATACAATGAGCTGTGTGACAT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTATGTCACACAGCTCATaGTATCCTCCCTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPMSHSS*YPPFRA
Trigger: GGCCCTGAAGGGAGGATACAATGAGCTGTGTGACAT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAAGGCAGCCGACCATTaGCCTTTTTCCTTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVKAADH*PFSFSR
Trigger: CCGACTGAAGGAAAAAGGCAAATGGTCGGCTGCCTT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAAGGCAGCCGACCATTaGCCTTTTTCCTTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPKAADH*PFSFSR
Trigger: CCGACTGAAGGAAAAAGGCAAATGGTCGGCTGCCTT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTGCGCTGGGTCGTTTCTaGGGACTCTTAGTCAGAGTG +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACALGRF*GLLVRV
Trigger: CACTCTGACTAAGAGTCCCAAGAAACGACCCAGCGC...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCCGGGATTCTTCAGTTaGTCAAGAAGATCCAGGATC +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPPGFFS*SRRSRI
Trigger: GATCCTGGATCTTCTTGACAAACTGAAGAATCCCGG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp AAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGCCAGTAGGCGGTGGGCCGGGATTCTTCAGTTaGTCAAGAAGATCCAGGATC +
Preference number: 5 (lower is better)
Translates to: KAVWCHSLGAGTLPVGGGPGFFS*SRRSRI
Trigger: GATCCTGGATCTTCTTGACAAACTGAAGAATCCCGG...CCCACCGCCTACTGGCAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp CATGGGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGAGCAGGTGCTGGTCCTaGGTGGAGGGATGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: HGRNYKAVWCHSLGAGTLSRCWS*VEGCVQ
Trigger: CTGGACACATCCCTCCACCAAGGACCAGCACCTGCT...CAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCGACATGAGAACGTTGTaGATGGAGTACACCCACGTA +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPDMRTL*MEYTHV
Trigger: TACGTGGGTGTACTCCATCAACAACGTTCTCATGTC...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCTTGGTGTCCTGGATCTaGGTGGAAACCATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPLVSWI*VETMFF
Trigger: GAAGAACATGGTTTCCACCAAGATCCAGGACACCAA...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCGGACAAGCAGGAATTaGTTCATGGGCTGGTACCAC +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVRTSRN*FMGWYH
Trigger: GTGGTACCAGCCCATGAACAAATTCCTGCTTGTCCG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCGGACAAGCAGGAATTaGTTCATGGGCTGGTACCAC +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPRTSRN*FMGWYH
Trigger: GTGGTACCAGCCCATGAACAAATTCCTGCTTGTCCG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS TCA 90 bp GATGAGGATGTTAGCTCCCTTGATGTCCCTGTGTATCTTCTTCTGTaGGTGCAAATAGGCCAGTCCCTGGGGAGAAGGGTGGACAAGGGG +
Preference number: 5 (lower is better)
Translates to: DEDVSSLDVPVYLLL*VQIGQSLGRRVDKG
Trigger: CCCCTTGTCCACCCTTCTCCCCAGGGACTGGCCTATTTGCACTCACAGAAGAAGATACACAGGGACATCAAGGGAGCTAACATCCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592888.5
ENST00000634864.1
CDS CCA 90 bp CACTCCATGCTTCCAGAAGGCCTGAAGCTGACCTCCAACCATAGCTaGGGAGAAAGCAATGCCCGTTACCCTTGGGGATCACTTGAGTTT +
Preference number: 5 (lower is better)
Translates to: HSMLPEGLKLTSNHS*GESNARYPWGSLEF
Trigger: AAACTCAAGTGATCCCCAAGGGTAACGGGCATTGCTTTCTCCCCAGCTATGGTTGGAGGTCAGCTTCAGGCCTTCTGGAAGCATGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588938.1
ENST00000634660.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGGATGTTAGCTCCCTaGATGTCCCTGTGTATCTTC +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDRMLAP*MSLCIF
Trigger: GAAGATACACAGGGACATCAAGGGAGCTAACATCCT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTATGTCACACAGCTCATaGTATCCTCCCTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACMSHSS*YPPFRA
Trigger: GGCCCTGAAGGGAGGATACAATGAGCTGTGTGACAT...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTAAGGCAGCCGACCATTaGCCTTTTTCCTTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACKAADH*PFSFSR
Trigger: CCGACTGAAGGAAAAAGGCAAATGGTCGGCTGCCTT...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGTGACTTTGATGAAGTaGTGGAAGGCAGCCGACCAT +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPVTLMK*WKAADH
Trigger: ATGGTCGGCTGCCTTCCACAACTTCATCAAAGTCAC...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGTGACTTTGATGAAGTaGTGGAAGGCAGCCGACCAT +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVVTLMK*WKAADH
Trigger: ATGGTCGGCTGCCTTCCACAACTTCATCAAAGTCAC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCCGGGATTCTTCAGTTaGTCAAGAAGATCCAGGATC +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDPGFFS*SRRSRI
Trigger: GATCCTGGATCTTCTTGACAAACTGAAGAATCCCGG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACGACATGAGAACGTTGTaGATGGAGTACACCCACGTA +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDDMRTL*MEYTHV
Trigger: TACGTGGGTGTACTCCATCAACAACGTTCTCATGTC...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACAGAGACATGAGAACGTaGTTGATGGAGTACACCCAC +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDRDMRT*LMEYTH
Trigger: GTGGGTGTACTCCATCAACAACGTTCTCATGTCTCT...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACTTGGTGTCCTGGATCTaGGTGGAAACCATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDLVSWI*VETMFF
Trigger: GAAGAACATGGTTTCCACCAAGATCCAGGACACCAA...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTCGGACAAGCAGGAATTaGTTCATGGGCTGGTACCAC +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACRTSRN*FMGWYH
Trigger: GTGGTACCAGCCCATGAACAAATTCCTGCTTGTCCG...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp TCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGATCCAGGAGGCTGGGATACCAGTaGATGCTGAGAGGGTGCACA +
Preference number: 5 (lower is better)
Translates to: SPMEGPFPGFFSLSRRSRRLGYQ*MLRGCT
Trigger: TGTGCACCCTCTCAGCATCAACTGGTATCCCAGCCT...CCTGGATCTTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGGATGTTAGCTCCCTaGATGTCCCTGTGTATCTTC +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVRMLAP*MSLCIF
Trigger: GAAGATACACAGGGACATCAAGGGAGCTAACATCCT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCCGGGATTCTTCAGTTaGTCAAGAAGATCCAGGATC +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPPGFFS*SRRSRI
Trigger: GATCCTGGATCTTCTTGACAAACTGAAGAATCCCGG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp CTCAATGTCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTTGTCAAGAAGCGGAGGGGGCAGCCATaGAACAACTTTACGAGAAGG +
Preference number: 5 (lower is better)
Translates to: LNVPNGGSFPGILQFVKKRRGQP*NNFTRR
Trigger: CCTTCTCGTAAAGTTGTTCAATGGCTGCCCCCTCCG...CTTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGACATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTGACATGAGAACGTTGTaGATGGAGTACACCCACGTA +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVDMRTL*MEYTHV
Trigger: TACGTGGGTGTACTCCATCAACAACGTTCTCATGTC...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTAGAGACATGAGAACGTaGTTGATGGAGTACACCCAC +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVRDMRT*LMEYTH
Trigger: GTGGGTGTACTCCATCAACAACGTTCTCATGTCTCT...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTAGAGACATGAGAACGTaGTTGATGGAGTACACCCAC +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPRDMRT*LMEYTH
Trigger: GTGGGTGTACTCCATCAACAACGTTCTCATGTCTCT...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTTTGGTGTCCTGGATCTaGGTGGAAACCATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPLVSWI*VETMFF
Trigger: GAAGAACATGGTTTCCACCAAGATCCAGGACACCAA...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
CDS-3UTR CAA 90 bp ACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACACCCCCCTAAAGTCATGTTTATaGGGAGATGAGGACATGCCA +
Preference number: 5 (lower is better)
Translates to: TTSVSMGEGVQGLVPDTPLKSCL*GDEDMP
Trigger: TGGCATGTCCTCATCTCCCAATAAACATGACTTTAG...GGGGGTGTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS TCA 90 bp TCCCATGGTAGGCCACGATGTTGGCGTGCCGGCAAGTTTTCAATATaGGGATTTCCTTCTGAAGGGTGGAGACATCATCATCAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: SHGRPRCWRAGKFSI*GFPSEGWRHHHQAP
Trigger: TGGAGCCTGATGATGATGTCTCCACCCTTCAGAAGGAAATCCTCATATTGAAAACTTGCCGGCACGCCAACATCGTGGCCTACCATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000587300.1
ENST00000588083.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634472.1
ENST00000634494.2
ENST00000634814.1
ENST00000634999.1
CDS-3UTR CAA 90 bp CATGGGAGGAATTATAAGGCTGTGTGGTGCCATTCATTGGGAGCTGGTACCTTGATGTCACACAGCTCATaGTATCCTCCCTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: HGRNYKAVWCHSLGAGTLMSHSS*YPPFRA
Trigger: GGCCCTGAAGGGAGGATACAATGAGCTGTGTGACAT...CAAGGTACCAGCTCCCAATGAATGGCACCACACAGCCTTATAATTCCTCCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTGACATGAGAACGTTGTaGATGGAGTACACCCACGTA +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACDMRTL*MEYTHV
Trigger: TACGTGGGTGTACTCCATCAACAACGTTCTCATGTC...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp TCATTCCTGGATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTGGGCGTGTTTGGTGTCCTGGATCTaGGTGGAAACCATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SFLDVEVAGSSRIIHWACLVSWI*VETMFF
Trigger: GAAGAACATGGTTTCCACCAAGATCCAGGACACCAA...ACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS-3UTR CAA 90 bp GCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTGACCTAAAGTCATGTTTATaGGGAGATGAGGACATGCCA +
Preference number: 5 (lower is better)
Translates to: AMTTSVSMGEGVQGLVPDLKSCL*GDEDMP
Trigger: TGGCATGTCCTCATCTCCCAATAAACATGACTTTAG...GTCAGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp GGACATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCTAAAGTCATGTTTATaGGGAGATGAGGACATGCCA +
Preference number: 5 (lower is better)
Translates to: GHAMTTSVSMGEGVQGLVLKSCL*GDEDMP
Trigger: TGGCATGTCCTCATCTCCCAATAAACATGACTTTAG...AACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp CATGCCATGACCACTAGTGTGTCTATGGGGGAGGGGGTGCAAGGACTAGTTCCTCTAAAGTCATGTTTATaGGGAGATGAGGACATGCCA +
Preference number: 5 (lower is better)
Translates to: HAMTTSVSMGEGVQGLVPLKSCL*GDEDMP
Trigger: TGGCATGTCCTCATCTCCCAATAAACATGACTTTAG...AGGAACTAGTCCTTGCACCCCCTCCCCCATAGACACACTAGTGGTCATGGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS-3UTR CAA 90 bp CCTGGATCTTGGTGGAAACCATGTTCTTCCTGGAGAATAGGTAGGTGTGAAGGGTTGGTGTCCTGGATCTaGGTGGAAACCATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: PGSWWKPCSSWRIGRCEGLVSWI*VETMFF
Trigger: GAAGAACATGGTTTCCACCAAGATCCAGGACACCAA...CCCTTCACACCTACCTATTCTCCAGGAAGAACATGGTTTCCACCAAGATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585583.5
ENST00000634236.1
CDS CCA 72 bp CCCAGCCAGCAAGAGAGCGCGCCAAAGCGCACCGTGTaGAAGAGCACCGACTTCCCCGGCCGCCCGGGGCTC +
Preference number: 6 (lower is better)
Translates to: PSQQESAPKRTV*KSTDFPGRPGL
Trigger: GAGCCCCGGGCGGCCGGGGAAGTCGGTGCTCTTCCACACGGTGCGCTTTGGCGCGCTCTCTTGCTGGCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000396857.7
ENST00000588938.1
ENST00000589130.5
ENST00000591517.5
ENST00000591921.1
ENST00000634395.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
ENST00000634660.1
CDS CCA 72 bp CCCTGCACAGACCCACGGCCTCCACCGCTTCGGTCATaGGGATCTCAGGTGTGCGAAGTCCCCGGACTGGGG +
Preference number: 6 (lower is better)
Translates to: PCTDPRPPPLRS*GSQVCEVPGLG
Trigger: CCCCAGTCCGGGGACTTCGCACACCTGAGATCCCCATGACCGAAGCGGTGGAGGCCGTGGGTCTGTGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588938.1
ENST00000634660.1
CDS CCA 72 bp TGTCACTGCAAAGGTCACCCCGGCCAGGCCAGGCATTaGATGGGAGCCAGGGAACCTGGGCTGGGGAGTCCT +
Preference number: 6 (lower is better)
Translates to: CHCKGHPGQARH*MGAREPGLGSP
Trigger: AGGACTCCCCAGCCCAGGTTCCCTGGCTCCCATCCAATGCCTGGCCTGGCCGGGGTGACCTTTGCAGTGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592225.1
ENST00000635132.1
CDS GCA 72 bp CTGGTACCACTGAAGCAGGACAACGGACGTCTCCAATaGACCGCACAGGAACGGGCCCCCAGAGCTCGCACC +
Preference number: 6 (lower is better)
Translates to: LVPLKQDNGRLQ*TAQERAPRART
Trigger: GGTGCGAGCTCTGGGGGCCCGTTCCTGTGCGGTGCATTGGAGACGTCCGTTGTCCTGCTTCAGTGGTACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000591921.1
ENST00000634395.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
CDS GCA 72 bp GGAACTTGGCCATGGCCTAAACGTAAGGCTGCTGCGTaGATTCCCGCAGAGCTCCGTGGCCTCATGGCCGCG +
Preference number: 6 (lower is better)
Translates to: GTWPWPKRKAAA*IPAELRGLMAA
Trigger: CGCGGCCATGAGGCCACGGAGCTCTGCGGGAATGCACGCAGCAGCCTTACGTTTAGGCCATGGCCAAGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589130.5
ENST00000634456.1
CDS TCA 72 bp CTAGCCCACTCCGCCAGCTCAAACTACCCTGATCCCTaGGCCCCTGAAATGCCACTCCCATCTCCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: LAHSASSNYPDP*APEMPLPSPGP
Trigger: GGGCCCAGGAGATGGGAGTGGCATTTCAGGGGCTCAGGGATCAGGGTAGTTTGAGCTGGCGGAGTGGGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000588083.5
ENST00000591707.1
ENST00000634999.1
ENST00000635447.1
CDS CCA 72 bp AGTGGTCCCGGGGGTCTCTCCCTCGGAACTTGGCCATaGCCTAAACGTAAGGCTGCTGCGTGCATTCCCGCA +
Preference number: 6 (lower is better)
Translates to: SGPGGLSLGTWP*PKRKAAACIPA
Trigger: TGCGGGAATGCACGCAGCAGCCTTACGTTTAGGCCATGGCCAAGTTCCGAGGGAGAGACCCCCGGGACCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589130.5
ENST00000634456.1
CDS CCA 72 bp GGTCAGCAGCGCGAACACGGACAGAGGCGTCGGCAGTaGGAACAGCACCTGCCGGACAAGCAGGAATTTGTT +
Preference number: 6 (lower is better)
Translates to: GQQREHGQRRRQ*EQHLPDKQEFV
Trigger: AACAAATTCCTGCTTGTCCGGCAGGTGCTGTTCCCACTGCCGACGCCTCTGTCCGTGTTCGCGCTGCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396857.7
ENST00000588938.1
ENST00000589130.5
ENST00000591517.5
ENST00000591921.1
ENST00000634395.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
ENST00000634660.1
CDS CCA 72 bp GATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTaGGCGTGTCTCCACCACTACAGGCCTGGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: DVEVAGSSRIIH*ACLHHYRPGGA
Trigger: GGCTCCCCCAGGCCTGTAGTGGTGGAGACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591210.1
ENST00000591921.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
ENST00000634814.1
ENST00000635583.1
CDS TCA 72 bp GGGAGAAAGCAATGCCCGTTACCCTTGGGGATCACTTaGGTTTCCACCCCTGATCCTGGGCTCTCCCGTCCC +
Preference number: 6 (lower is better)
Translates to: GRKQCPLPLGIT*VSTPDPGLSRP
Trigger: GGGACGGGAGAGCCCAGGATCAGGGGTGGAAACTCAAGTGATCCCCAAGGGTAACGGGCATTGCTTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588938.1
ENST00000634660.1
CDS GCA 72 bp AACACCATCACCATATCTTCCTCTACCTGGGTCACCTaGACGGGTCCCCTGTGCTCGGTGCTCATCTCGCCC +
Preference number: 6 (lower is better)
Translates to: NTITISSSTWVT*TGPLCSVLISP
Trigger: GGGCGAGATGAGCACCGAGCACAGGGGACCCGTGCAGGTGACCCAGGTAGAGGAAGATATGGTGATGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000396857.7
ENST00000588938.1
ENST00000589130.5
ENST00000591517.5
ENST00000591921.1
ENST00000634395.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
ENST00000634660.1
CDS TCA 72 bp GCTGTAGCAGGTCATAGTGGTCCCGGGGGTCTCTATTaGAAATGTCAGGGTCCACGACGTCCATCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: AVAGHSGPGGLY*KCQGPRRPSLG
Trigger: CCCCAGGGATGGACGTCGTGGACCCTGACATTTTCAATAGAGACCCCCGGGACCACTATGACCTGCTACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000587300.1
ENST00000591517.5
ENST00000634395.1
ENST00000634472.1
ENST00000634494.2
ENST00000634814.1
CDS CCA 72 bp ATGAAAGAGAGGCGTCTGGCCAGTGTAGCCCCAATCTaGGCCGAGATGCCAAAGTCAGCCAATCTGACCTCC +
Preference number: 6 (lower is better)
Translates to: MKERRLASVAPI*AEMPKSANLTS
Trigger: GGAGGTCAGATTGGCTGACTTTGGCATCTCGGCCCAGATTGGGGCTACACTGGCCAGACGCCTCTCTTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000591707.1
ENST00000592888.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
ENST00000634864.1
ENST00000635447.1
CDS TCA 72 bp GAGCACTTCCCGGCAGACATAGCTAATCTGGAGCTCTaGCAGGGAGCCTGTCACTTGGTAGATGTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: EHFPADIANLEL*QGACHLVDVLE
Trigger: CTCCAGGACATCTACCAAGTGACAGGCTCCCTGTCAGAGCTCCAGATTAGCTATGTCTGCCGGGAAGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000588083.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
ENST00000634999.1
CDS TCA 72 bp ATGTTCTTCCTTGCCAGTAGGCGGTGGGGGCTAATGTaGGCGATGGGGTTTCCTGCTCTGGTCTCTTTCCGT +
Preference number: 6 (lower is better)
Translates to: MFFLASRRWGLM*AMGFPALVSFR
Trigger: ACGGAAAGAGACCAGAGCAGGAAACCCCATCGCTCACATTAGCCCCCACCGCCTACTGGCAAGGAAGAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000591921.1
ENST00000634395.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
CDS TCA 72 bp CGGACAAGCAGGAATTTGTTCATGGGCTGGTACCACTaGAGCAGGACAACGGACGTCTCCAATGCACCGCAC +
Preference number: 6 (lower is better)
Translates to: RTSRNLFMGWYH*SRTTDVSNAPH
Trigger: GTGCGGTGCATTGGAGACGTCCGTTGTCCTGCTTCAGTGGTACCAGCCCATGAACAAATTCCTGCTTGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000591921.1
ENST00000634395.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
CDS CCA 72 bp GTCCGGCTAGGAAAGAGCATTTCCAGCGTGGCCTCCTaGTCATTCCGGTTCAGGATGAAGATGCCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: VRLGKSISSVAS*SFRFRMKMPSS
Trigger: AGAGGAAGGCATCTTCATCCTGAACCGGAATGACCAGGAGGCCACGCTGGAAATGCTCTTTCCTAGCCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000589130.5
ENST00000591517.5
ENST00000591921.1
ENST00000634395.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
CDS CCA 72 bp GGAACAGCACCTGCCGGACAAGCAGGAATTTGTTCATaGGCTGGTACCACTGAAGCAGGACAACGGACGTCT +
Preference number: 6 (lower is better)
Translates to: GTAPAGQAGICS*AGTTEAGQRTS
Trigger: AGACGTCCGTTGTCCTGCTTCAGTGGTACCAGCCCATGAACAAATTCCTGCTTGTCCGGCAGGTGCTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000396857.7
ENST00000588938.1
ENST00000589130.5
ENST00000591517.5
ENST00000591921.1
ENST00000634395.1
ENST00000634456.1
ENST00000634475.1
ENST00000634494.2
ENST00000634660.1
CDS CCA 72 bp AACCATAGCTGGGGAGAAAGCAATGCCCGTTACCCTTaGGGATCACTTGAGTTTCCACCCCTGATCCTGGGC +
Preference number: 6 (lower is better)
Translates to: NHSWGESNARYP*GSLEFPPLILG
Trigger: GCCCAGGATCAGGGGTGGAAACTCAAGTGATCCCCAAGGGTAACGGGCATTGCTTTCTCCCCAGCTATGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588938.1
ENST00000634660.1
CDS CCA 72 bp GATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTaGGCGTGTCTCCACCACTACAGGCCTGTAAACCCA +
Preference number: 6 (lower is better)
Translates to: DVEVAGSSRIIH*ACLHHYRPVNP
Trigger: TGGGTTTACAGGCCTGTAGTGGTGGAGACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593196.1
ENST00000635246.1
CDS CCA 72 bp GATGTAGAGGTTGCTGGGAGCAGTAGGATCATCCACTaGGCGTGTCTCCACCACTACAGGCCTGTAATCCCA +
Preference number: 6 (lower is better)
Translates to: DVEVAGSSRIIH*ACLHHYRPVIP
Trigger: TGGGATTACAGGCCTGTAGTGGTGGAGACACGCCCAGTGGATGATCCTACTGCTCCCAGCAACCTCTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591517.5
ENST00000634395.1
CDS CAA 90 bp TCCTCAATGTCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTaGTCAAGAAGATCCAGGATCAGGCCTCGATTCAGCCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: SSMSPMEGPFPGFFS*SRRSRIRPRFSPGW
Trigger: CCAGCCTGGGCTGAATCGAGGCCTGATCCTGGATCTTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGACATTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000396857.7
ENST00000585583.5
ENST00000586296.5
ENST00000589002.5
ENST00000589130.5
ENST00000591517.5
ENST00000634236.1
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
ENST00000635240.1
CDS TCA 72 bp CCAGACCACCTTGATGTCCCTGTGTATCTTCTTCTGTaGGTGCAAATAGGCCAGTCCCTGGGGAGAAGGGTG +
Preference number: 6 (lower is better)
Translates to: PDHLDVPVYLLL*VQIGQSLGRRV
Trigger: CACCCTTCTCCCCAGGGACTGGCCTATTTGCACTCACAGAAGAAGATACACAGGGACATCAAGGTGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591707.1
ENST00000635447.1
CDS TCA 72 bp CTCCATCTTCACCATCTTCAGTGCCACCAGGTCCCCTaGCACCTTGTCTCGAGCCTTAAAGACTTCCCCATA +
Preference number: 6 (lower is better)
Translates to: LHLHHLQCHQVP*HLVSSLKDFPI
Trigger: TATGGGGAAGTCTTTAAGGCTCGAGACAAGGTGTCAGGGGACCTGGTGGCACTGAAGATGGTGAAGATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000587300.1
ENST00000588083.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634472.1
ENST00000634494.2
ENST00000634814.1
ENST00000634999.1
CDS CAA 72 bp TCCCCAATGGAGGGTCCTTTCCCGGGATTCTTCAGTTaGTCAAGAAGATCCAGGATCAGGCCTCGATTCAGC +
Preference number: 6 (lower is better)
Translates to: SPMEGPFPGFFS*SRRSRIRPRFS
Trigger: GCTGAATCGAGGCCTGATCCTGGATCTTCTTGACAAACTGAAGAATCCCGGGAAAGGACCCTCCATTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000396857.7
ENST00000585583.5
ENST00000586296.5
ENST00000589002.5
ENST00000589130.5
ENST00000591517.5
ENST00000634236.1
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
ENST00000635240.1
CDS CAA 90 bp TTGGTGGCGCTGGGTCGTTTCTTGGGACTCTTAGTCAGAGTGACTTaGATGAAGTTGTGGAAGGCAGCCGACCATTTGCCTTTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: LVALGRFLGLLVRVT*MKLWKAADHLPFSF
Trigger: GAAGGAAAAAGGCAAATGGTCGGCTGCCTTCCACAACTTCATCAAAGTCACTCTGACTAAGAGTCCCAAGAAACGACCCAGCGCCACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634494.2
ENST00000634814.1
CDS TCA 72 bp GCGTGCCGGCAAGTTTTCAATATGAGGATTTCCTTCTaGAGGGTGGAGACATCATCATCAGGCTCCATCTTC +
Preference number: 6 (lower is better)
Translates to: ACRQVFNMRISF*RVETSSSGSIF
Trigger: GAAGATGGAGCCTGATGATGATGTCTCCACCCTTCAGAAGGAAATCCTCATATTGAAAACTTGCCGGCACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000587300.1
ENST00000588083.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634472.1
ENST00000634494.2
ENST00000634814.1
ENST00000634999.1
CDS TCA 72 bp AGGCCACGATGTTGGCGTGCCGGCAAGTTTTCAATATaGGGATTTCCTTCTGAAGGGTGGAGACATCATCAT +
Preference number: 6 (lower is better)
Translates to: RPRCWRAGKFSI*GFPSEGWRHHH
Trigger: ATGATGATGTCTCCACCCTTCAGAAGGAAATCCTCATATTGAAAACTTGCCGGCACGCCAACATCGTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000396857.7
ENST00000586296.5
ENST00000587300.1
ENST00000588083.5
ENST00000589130.5
ENST00000591517.5
ENST00000634395.1
ENST00000634456.1
ENST00000634472.1
ENST00000634494.2
ENST00000634814.1
ENST00000634999.1