RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000047849

Ensembl transcript IDs: ENST00000335271.9, ENST00000360240.10, ENST00000383736.3, ENST00000395734.7, ENST00000420772.6, ENST00000423088.5, ENST00000426837.6, ENST00000429422.5, ENST00000434267.5, ENST00000439356.2, ENST00000462206.1, ENST00000468075.2, ENST00000482752.1, ENST00000497735.1, ENST00000633710.1, ENST00000683076.1

Found 1592 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGCGCTCACTGGTCTAGTGGACAGCCC +
Preference number: 1 (lower is better)
Translates to: LPRARKAGGKASLAG*PARRPSAHWSSGQP
Trigger: GGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR CCA 90 bp AAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTaGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGAGC +
Preference number: 1 (lower is better)
Translates to: KASLAGCPARRPSAH*SSGQPGKGGQGPGS
Trigger: GCTCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR CCA 90 bp CCTGTCGTCAACCTCAGCATCCTCATGACCCCAGGACAGACGCAGTaGAGGCAGCAGGTACTCTGGGCCTGTGCTGTTGCCCCTGAGGTG +
Preference number: 1 (lower is better)
Translates to: PVVNLSILMTPGQTQ*RQQVLWACAVAPEV
Trigger: CACCTCAGGGGCAACAGCACAGGCCCAGAGTACCTGCTGCCTCCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR GCA 90 bp GAGGAGGCCAAGTCTGGGGCAGCCTCCTCAGAGGCAAATCTACACTaGAGCCAATCCCCCTCCAGAGAAGCCCTTGGAATCTCCCAGGCC +
Preference number: 1 (lower is better)
Translates to: EEAKSGAASSEANLH*SQSPSREALGISQA
Trigger: GGCCTGGGAGATTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTTGGCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR GCA 90 bp GTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTaGTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGGACAGCCT +
Preference number: 1 (lower is better)
Translates to: VLGELGTWCQTSTRH*YLRKGEDLSGPGQP
Trigger: AGGCTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR TCA 90 bp AGGAGTGAAAGGACCTGGAACCTGTCGTCAACCTCAGCATCCTCATaGCCCCAGGACAGACGCAGTGGAGGCAGCAGGTACTCTGGGCCT +
Preference number: 1 (lower is better)
Translates to: RSERTWNLSSTSASS*PQDRRSGGSRYSGP
Trigger: AGGCCCAGAGTACCTGCTGCCTCCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAGGTTCCAGGTCCTTTCACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR CCA 90 bp GGCAGCACTTCCTCCGTGAGCCCCTGCAGTTTCCTGGTGTGTGCTTaGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTGCTA +
Preference number: 1 (lower is better)
Translates to: GSTSSVSPCSFLVCA*GARDMVSNLHKALL
Trigger: TAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCACGGAGGAAGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR CCA 90 bp CACTGGCTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATaGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCCAGGCAGCACT +
Preference number: 1 (lower is better)
Translates to: HWLPHVLGTAEVFCT*SLRRKAGPPGPGST
Trigger: AGTGCTGCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR TCA 90 bp AGCACGCCACTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTaGAAGGACCTGGAACCTGTCGTCAACCTCAGCATCCTCATGACC +
Preference number: 1 (lower is better)
Translates to: STPLGPPTPNLWPKE*KDLEPVVNLSILMT
Trigger: GGTCATGAGGATGCTGAGGTTGACGACAGGTTCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR GCA 90 bp ACAAAACACTGGCTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTaGACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: TKHWLPHVLGTAEVF*TWSLRRKAGPPGPG
Trigger: GCCTGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR CCA 90 bp GGGAACTCTGACCACTCCTGTTGTCTACCTAGAGAGCACGCCACTTaGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTGAAAGGACCT +
Preference number: 1 (lower is better)
Translates to: GNSDHSCCLPREHAT*ATYPQPLAKGVKGP
Trigger: AGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGAGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR GCA 90 bp AGATCAAATCTAAACTTAGGTCAAGACCCCTACCTTCTCCAGGGATaGCAGGACCAGAGAAGGGCAGAGGTCAGGAGGGGGCATGAGGAG +
Preference number: 1 (lower is better)
Translates to: RSNLNLGQDPYLLQG*QDQRRAEVRRGHEE
Trigger: CTCCTCATGCCCCCTCCTGACCTCTGCCCTTCTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR GCA 90 bp GAGGCTCCATCAAACCCTGCAGAGCACAAGAGGAAGCAGGTTGTTTaGTCAGGCATCAGCAGAAATAGGCCCCGAAGAACTACCCTCAGT +
Preference number: 1 (lower is better)
Translates to: EAPSNPAEHKRKQVV*SGISRNRPRRTTLS
Trigger: ACTGAGGGTAGTTCTTCGGGGCCTATTTCTGCTGATGCCTGAGCAAACAACCTGCTTCCTCTTGTGCTCTGCAGGGTTTGATGGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR CCA 90 bp CCCACTTTCATCCCAGCAGGCCCTTTCTTCCTGCTGACAAAACACTaGCTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGG +
Preference number: 1 (lower is better)
Translates to: PTFIPAGPFFLLTKH*LPHVLGTAEVFCTW
Trigger: CCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR TCA 90 bp CCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCTTTCTTCCTGCTaGCAAAACACTGGCTCCCTCATGTTCTTGGCACAGCAGAAGTGT +
Preference number: 1 (lower is better)
Translates to: PVSFPLSSQQALSSC*QNTGSLMFLAQQKC
Trigger: ACACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR CCA 90 bp AGGCCCTTTCTTCCTGCTGACAAAACACTGGCTCCCTCATGTTCTTaGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGC +
Preference number: 1 (lower is better)
Translates to: RPFLPADKTLAPSCS*HSRSVLHMVSTEES
Trigger: GCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAAAGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR TCA 90 bp ACCAGTCTGGCTGCCTCACCATTGAGATACTGGACCACTTGGGTGTaGCCACTATGGCAATACAGCATTTCATTATGGGACTGGCTACTT +
Preference number: 1 (lower is better)
Translates to: TSLAASPLRYWTTWV*PLWQYSISLWDWLL
Trigger: AAGTAGCCAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCACACCCAAGTGGTCCAGTATCTCAATGGTGAGGCAGCCAGACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR GCA 90 bp ATGAAAATCATCACATTTCAACAAAGCAGCCCTGACCAGTCTGGCTaGCTCACCATTGAGATACTGGACCACTTGGGTGTGACCACTATG +
Preference number: 1 (lower is better)
Translates to: MKIITFQQSSPDQSG*LTIEILDHLGVTTM
Trigger: CATAGTGGTCACACCCAAGTGGTCCAGTATCTCAATGGTGAGGCAGCCAGACTGGTCAGGGCTGCTTTGTTGAAATGTGATGATTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR TCA 90 bp CTTAAAACTGTTACAACAGAATCATGGACTGACACAGGTAATGGCTaGGCCATAAGCAAATCGAGAAGTACAGAAATGTCCCACCCCAAA +
Preference number: 1 (lower is better)
Translates to: LKTVTTESWTDTGNG*AISKSRSTEMSHPK
Trigger: TTTGGGGTGGGACATTTCTGTACTTCTCGATTTGCTTATGGCTCAGCCATTACCTGTGTCAGTCCATGATTCTGTTGTAACAGTTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR-3UTR GCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: PRARKAGGKASLAGCPARASLAG*PARRPS
Trigger: GCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGC...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGGTGTGGGGCAGGGCTaGTGCTGCCCCGGGCACGCA +
Preference number: 2 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLGVGQG*CCPGHA
Trigger: TGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp CGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGTGGGGCAGGGCTGCTaGTGCCCCGGGCACGCAAAG +
Preference number: 2 (lower is better)
Translates to: RPSAHWSSGQPGKGGQGPVGQGC*CPGHAK
Trigger: CTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCAC...GGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGACGGCCCCGTGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 2 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGRPRGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCG...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: AAHILQRGWHKDISALFPASLAG*PARRPS
Trigger: GCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGC...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCTCCAGGGCCCTAAGCTaGCCACATCCTCCAGCGGGG +
Preference number: 2 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSSRALS*PHPPAG
Trigger: CCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGA...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTASLAG*PARRPS
Trigger: GCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGC...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp TTCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: FPGFLLTAAIPRPSWDALASLAG*PARRPS
Trigger: GCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGC...GAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp TCTGACCACTCCTGTTGTCTACCTAGAGAGCACGCCACTTGGGCCACCTACCCCGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: SDHSCCLPREHATWATYPASLAG*PARRPS
Trigger: GCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGC...GGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR-3UTR GCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGGGCAGGGCTGCTGCTaGCCCGGGCACGCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSGQGCC*PGHAKQ
Trigger: CTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCC...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTGGGCAGGGCTGCTGCTaGCCCGGGCACGCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTGQGCC*PGHAKQ
Trigger: CTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCC...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCGTGGGGCAGGGCTGCTaGTGCCCCGGGCACGCAAAG +
Preference number: 2 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGIVGQGC*CPGHAK
Trigger: CTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCAC...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTGGTGTGGGGCAGGGCTaGTGCTGCCCCGGGCACGCA +
Preference number: 2 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPGVGQG*CCPGHA
Trigger: TGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACC...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCGGGCAGGGCTGCTGCTaGCCCGGGCACGCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSGQGCC*PGHAKQ
Trigger: CTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCC...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 2 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR TCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCAGGAGCAGTGGCGCAGTaGTGGGGCAAGACCAAAGCA +
Preference number: 2 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPGAVAQ*WGKTKA
Trigger: TGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCC...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 2 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGIAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp AAGTCTGGGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCCAAGGGCCCCTTGTGTaGCTGACCGGCTCACCAGCC +
Preference number: 2 (lower is better)
Translates to: KSGAASSEANLHCSQSPSQGPLV*LTGSPA
Trigger: GGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTG...GGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCGCCCAAGCGCTCACTaGTCTAGTGGACAGCCCGGG +
Preference number: 2 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPRPSAH*SSGQPG
Trigger: CCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR TCA 90 bp TCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAGGCCCCTTGTGTGCCTaGCCGGCTCACCAGCCACAG +
Preference number: 2 (lower is better)
Translates to: SSEANLHCSQSPSREALGGPLCA*PAHQPQ
Trigger: CTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCC...TCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR TCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAGGCCCCTTGTGTGCCTaGCCGGCTCACCAGCCACAG +
Preference number: 2 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTGPLCA*PAHQPQ
Trigger: CTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCC...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR TCA 90 bp GTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGGGTCAGGAGGGGGCATaGGGAGGCCAAGTCTGGGGC +
Preference number: 2 (lower is better)
Translates to: VSWCVLGELGTWCQTSTRGQEGA*GGQVWG
Trigger: GCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACC...CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR TCA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCGCAGCACTTCCTCCGTaGGCCCCTGCAGTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: VKPPQGTATSERGRTCQAAALPP*APAVSW
Trigger: CCAGGAAACTGCAGGGGCTCACGGAGGAAGTGCTGC...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp TGTGGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCGCCGCCAGGGAAGTGTaGGGGGCGGGAGACAATGTC +
Preference number: 2 (lower is better)
Translates to: CGCRPEGIPSPGPFLFSSAAREV*GAGDNV
Trigger: GACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGC...GCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGGCCGCCAGGGAAGTGTaGGGGGCGGGAGACAATGTC +
Preference number: 2 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRAAREV*GAGDNV
Trigger: GACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGC...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCGCCCAAGCGCTCACTaGTCTAGTGGACAGCCCGGG +
Preference number: 2 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSRPSAH*SSGQPG
Trigger: CCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR TCA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCGGTCTCAATCTGCAGTaGCATGGGAGGAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLGLNLQ*HGRREG
Trigger: CCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACC...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
3UTR-3UTR TCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGGCAGCACTTCCTCCGTaGGCCCCTGCAGTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRAALPP*APAVSW
Trigger: CCAGGAAACTGCAGGGGCTCACGGAGGAAGTGCTGC...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTGGGCAGGGCTGCTGCTaGCCCGGGCACGCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: PLSSQGIREADSLSLMPFGQGCC*PGHAKQ
Trigger: CTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCC...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAACAAGGGCCCCTTGTGTaGCTGACCGGCTCACCAGCC +
Preference number: 2 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEQGPLV*LTGSPA
Trigger: GGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTG...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAAGGGGGCGCCCATTTGTaGGACCAGAGGGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEGGAHL*DQRERQ
Trigger: CTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCC...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp CTGGAACCTGTCGTCAACCTCAGCATCCTCATGACCCCAGGACAGACGCAGTGGCCAGGACAGACGCAGTaGAGGCAGCAGGTACTCTGG +
Preference number: 2 (lower is better)
Translates to: LEPVVNLSILMTPGQTQWPGQTQ*RQQVLW
Trigger: CCAGAGTACCTGCTGCCTCCACTGCGTCTGTCCTGG...CCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAGGTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR-3UTR TCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGGGAGCAGTGGCGCAGTaGTGGGGCAAGACCAAAGCA +
Preference number: 2 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRGAVAQ*WGKTKA
Trigger: TGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCC...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp AGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACGGCCCCGTGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 2 (lower is better)
Translates to: RTASLHMEIKSKLRSRPLRPRGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCG...TAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp GCCACTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTGAAAGGACCTGGAGTCCTAGGGTGTGGGTaGCGGCCTGAAGGAATTCCA +
Preference number: 2 (lower is better)
Translates to: ATWATYPQPLAKGVKGPGVLGCG*RPEGIP
Trigger: TGGAATTCCTTCAGGCCGGCACCCACACCCTAGGAC...TCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR-3UTR CCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCTCCTCCACGGAGCAGTaGCGCAGTGATGGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSSSTEQ*RSDGAR
Trigger: TCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGA...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp TCTGACCACTCCTGTTGTCTACCTAGAGAGCACGCCACTTGGGCCACCTACCCCCAGAGGGAGAGGCAGTaGCTTAAGCTCCACGGTCAG +
Preference number: 2 (lower is better)
Translates to: SDHSCCLPREHATWATYPQRERQ*LKLHGQ
Trigger: CTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTG...GGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR-3UTR CCA 90 bp TGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGCGCCCATTTGTaGGACCAGAGGGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: WGARDMVSNLHKALLPQKGGAHL*DQRERQ
Trigger: CTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCC...TTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp GTGTCTCCTGACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCAGGCAGCAGGTACTCTaGGCCTGTGCTGTTGCCCCT +
Preference number: 2 (lower is better)
Translates to: VSPDYATLFPSHFHPSRPRQQVL*ACAVAP
Trigger: AGGGGCAACAGCACAGGCCCAGAGTACCTGCTGCCT...GGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR-3UTR TCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAGGAGCAGTGGCGCAGTaGTGGGGCAAGACCAAAGCA +
Preference number: 2 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTGAVAQ*WGKTKA
Trigger: TGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCC...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCGGGCAGGGCTGCTGCTaGCCCGGGCACGCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: MRIESGSPLLDPNLASTTGQGCC*PGHAKQ
Trigger: CTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCC...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp TGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 2 (lower is better)
Translates to: WGARDMVSNLHKALLPQKAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...TTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp AGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTATGCACCCCTCTTCCCTaGCGCACCGCCTCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: RTASLHMEIKSKLRSRPLCTPLP*RTASRA
Trigger: GGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCA...TAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp GGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTCAGAGGGAGAGGCAGTaGCTTAAGCTCCACGGTCAG +
Preference number: 2 (lower is better)
Translates to: GTAEVFCTWSLRRKAGPPQRERQ*LKLHGQ
Trigger: CTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTG...AGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGGCCCCTGCAGTTTCCTaGTGTGTGCTTGGGGAGCTA +
Preference number: 2 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRAPAVS*CVLGEL
Trigger: TAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGC...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR CAA 90 bp TGTCTACCTAGAGAGCACGCCACTTGGGCCACCTACCCCCAACCTTaGGCCAAAGGAGTGAAAGGACCTGGAACCTGTCGTCAACCTCAG +
Preference number: 2 (lower is better)
Translates to: CLPREHATWATYPQP*AKGVKGPGTCRQPQ
Trigger: CTGAGGTTGACGACAGGTTCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR-3UTR TCA 90 bp CAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACCTTGGTCAGGAGGGGGCATaGGGAGGCCAAGTCTGGGGC +
Preference number: 2 (lower is better)
Translates to: QPPCTWRSNLNLGQDPYLGQEGA*GGQVWG
Trigger: GCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACC...AAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAGTCCTAGGGTGTGGGTaGCGGCCTGAAGGAATTCCA +
Preference number: 2 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTVLGCG*RPEGIP
Trigger: TGGAATTCCTTCAGGCCGGCACCCACACCCTAGGAC...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGTCCTCCACGGAGCAGTaGCGCAGTGATGGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRSSTEQ*RSDGAR
Trigger: TCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGA...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp TTCTTCCTGCTGACAAAACACTGGCTCCCTCATGTTCTTGGCACAGCAGAAGTGGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 2 (lower is better)
Translates to: FFLLTKHWLPHVLGTAEVGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...CACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp AGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTAACAATGTCGGCCCCGTaGTCGGTGCGGGCCCTGGCA +
Preference number: 2 (lower is better)
Translates to: RTASLHMEIKSKLRSRPLTMSAP*SVRALA
Trigger: TGCCAGGGCCCGCACCGACCACGGGGCCGACATTGT...TAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGTTCCTGGTGTGTGCTTaGGGAGCTAGGGACATGGTG +
Preference number: 2 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRFLVCA*GARDMV
Trigger: CACCATGTCCCTAGCTCCCCAAGCACACACCAGGAA...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR TCA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTGGAGCAGTGGCGCAGTaGTGGGGCAAGACCAAAGCA +
Preference number: 2 (lower is better)
Translates to: PLSSQGIREADSLSLMPFGAVAQ*WGKTKA
Trigger: TGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCC...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGATCCTCCAGCGGGGGTaGCATAAGGATATCTCCGCC +
Preference number: 2 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRILQRG*HKDISA
Trigger: GGCGGAGATATCCTTATGCCACCCCCGCTGGAGGAT...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp TGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGCCCCTGCAGTTTCCTaGTGTGTGCTTGGGGAGCTA +
Preference number: 2 (lower is better)
Translates to: WGARDMVSNLHKALLPQKAPAVS*CVLGEL
Trigger: TAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGC...TTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp TCTGACCACTCCTGTTGTCTACCTAGAGAGCACGCCACTTGGGCCACCTACCCCCTGCTGACAAAACACTaGCTCCCTCATGTTCTTGGC +
Preference number: 2 (lower is better)
Translates to: SDHSCCLPREHATWATYPLLTKH*LPHVLG
Trigger: GCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAG...GGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR-3UTR TCA 90 bp TCAGGCCCAGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGTGTGGGTGCCGGCCTaGAGGAATTCCATCTCCTGG +
Preference number: 2 (lower is better)
Translates to: SGPGQPPCTWRSNLNLGQVWVPA*RNSISW
Trigger: CCAGGAGATGGAATTCCTTCAGGCCGGCACCCACAC...TTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGGGTGTGGGGCAGGGCTaGTGCTGCCCCGGGCACGCA +
Preference number: 2 (lower is better)
Translates to: TLTEDFHVDMASTCRTILGVGQG*CCPGHA
Trigger: TGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACC...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGGACATGGCTTCAACCTaGAGAACTATTTTGCCAGTT +
Preference number: 2 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPDMAST*RTILPV
Trigger: AACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTC...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp TCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGACCAGATCCCAGGGAATaGGACAGAGATGCCAAAACC +
Preference number: 2 (lower is better)
Translates to: SSEANLHCSQSPSREALGPDPRE*DRDAKT
Trigger: GGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGG...TCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp GGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTAGGAATTCCATCTCCTaGCCCTTTCTTGTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: GCRPEGIPSPGPFLFSSPRNSIS*PFLVLQ
Trigger: CTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCT...AGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp CAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCAGGAATTCCATCTCCTaGCCCTTTCTTGTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: QQKCSAHGLYGGKLVPLARNSIS*PFLVLQ
Trigger: CTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCT...GGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCGAAGTGTTCTGCACATaGTCTCTACGGAGGAAAGCT +
Preference number: 2 (lower is better)
Translates to: VKPPQGTATSERGRTCQAEVFCT*SLRRKA
Trigger: AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTC...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR TCA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTAGGCTCCCTTGGACATaGGGGCTTACATGTCCTAGG +
Preference number: 2 (lower is better)
Translates to: PLSSQGIREADSLSLMPFRLPWT*GLTCPR
Trigger: CCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCT...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR TCA 90 bp GTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGTTCCTACTATCTGCATaGGGCTCCCTTGGACATGAG +
Preference number: 2 (lower is better)
Translates to: VSWCVLGELGTWCQTSTRFLLSA*GSLGHE
Trigger: CTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAA...CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCATGTCAGTTTCTTTTaGGTTTGGACCAAAGAACCA +
Preference number: 2 (lower is better)
Translates to: AAHILQRGWHKDISALFPHVSFF*VWTKEP
Trigger: TGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATG...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR CAA 90 bp GAAATGAGGCTCCATCAAACCCTGCAGAGCACAAGAGGAAGCAGGTaGTTTGCTCAGGCATCAGCAGAAATAGGCCCCGAAGAACTACCC +
Preference number: 2 (lower is better)
Translates to: EMRLHQTLQSTRGSR*FAQASAEIGPEELP
Trigger: GGGTAGTTCTTCGGGGCCTATTTCTGCTGATGCCTGAGCAAACAACCTGCTTCCTCTTGTGCTCTGCAGGGTTTGATGGAGCCTCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR TCA 90 bp AAATCTAAACTTAGGTCAAGACCCCTACCTTCTCCAGGGATGCCAGGACCAGAGAGGCTCCCTTGGACATaGGGGCTTACATGTCCTAGG +
Preference number: 2 (lower is better)
Translates to: KSKLRSRPLPSPGMPGPERLPWT*GLTCPR
Trigger: CCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCT...CTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR TCA 90 bp TGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAATTCCTACTATCTGCATaGGGCTCCCTTGGACATGAG +
Preference number: 2 (lower is better)
Translates to: WGARDMVSNLHKALLPQKFLLSA*GSLGHE
Trigger: CTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAA...TTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCGACATGGCTTCAACCTaGAGAACTATTTTGCCAGTT +
Preference number: 2 (lower is better)
Translates to: VKPPQGTATSERGRTCQADMAST*RTILPV
Trigger: AACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTC...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp CCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACCTTCTCCAGGTCCTAGGGTGTGGGTaGCGGCCTGAAGGAATTCCA +
Preference number: 2 (lower is better)
Translates to: PCTWRSNLNLGQDPYLLQVLGCG*RPEGIP
Trigger: TGGAATTCCTTCAGGCCGGCACCCACACCCTAGGAC...CTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp CTCCAGAGAAGCCCTTGGAATCTCCCAGGCCATTTCACTACAAACTTATGTTTGTCCTCCACGGAGCAGTaGCGCAGTGATGGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: LQRSPWNLPGHFTTNLCLSSTEQ*RSDGAR
Trigger: TCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGA...CAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp TCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGGACAGCATGTCAGTTTCTTTTaGGTTTGGACCAAAGAACCA +
Preference number: 2 (lower is better)
Translates to: STRHCYLRKGEDLSGPGQHVSFF*VWTKEP
Trigger: TGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATG...CTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp TTCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCCATGTCAGTTTCTTTTaGGTTTGGACCAAAGAACCA +
Preference number: 2 (lower is better)
Translates to: FPGFLLTAAIPRPSWDALHVSFF*VWTKEP
Trigger: TGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATG...GAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR CAA 90 bp AGCCCTGACCAGTCTGGCTGCCTCACCATTGAGATACTGGACCACTaGGGTGTGACCACTATGGCAATACAGCATTTCATTATGGGACTG +
Preference number: 2 (lower is better)
Translates to: SPDQSGCLTIEILDH*GVTTMAIQHFIMGL
Trigger: CAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCACACCCAAGTGGTCCAGTATCTCAATGGTGAGGCAGCCAGACTGGTCAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR TCA 90 bp TTCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTTAAATTTCCAGACCTaGTTTCCTACTATCTGCATG +
Preference number: 2 (lower is better)
Translates to: FPGFLLTAAIPRPSWDALLNFQT*FPTICM
Trigger: CATGCAGATAGTAGGAAATCAGGTCTGGAAATTTAA...GAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGAGGCAAATCTACACTaGAGCCAATCCCCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKAEANLH*SQSPSR
Trigger: TCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTC...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp CCTGTAGAAGAGGGAATGCTTCCTAAATTCCGGAAGTCGCTGCAAGGATTCAGTTCACTGGTCTGGTGTTaGAGCAGCCCCAGTGTTGAG +
Preference number: 2 (lower is better)
Translates to: PVEEGMLPKFRKSLQGFSSLVWC*SSPSVE
Trigger: CTCAACACTGGGGCTGCTGCAACACCAGACCAGTGA...ACTGAATCCTTGCAGCGACTTCCGGAATTTAGGAAGCATTCCCTCTTCTACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR GCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAGACATGGCTTCAACCTaGAGAACTATTTTGCCAGTT +
Preference number: 2 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTDMAST*RTILPV
Trigger: AACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTC...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR GCA 90 bp GTACACAACGGAAAGTCATACCCAGGCTTCTCCACCCATAACTTAGACAGCTACGGCTCCATCAAACCCTaGAGAGCACAAGAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: VHNGKSYPGFSTHNLDSYGSIKP*RAQEEA
Trigger: TGCTTCCTCTTGTGCTCTGCAGGGTTTGATGGAGCC...GTAGCTGTCTAAGTTATGGGTGGAGAAGCCTGGGTATGACTTTCCGTTGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CCA 90 bp GTACACAACGGAAAGTCATACCCAGGCTTCTCCACCCATAACTTAGACAGCTACGAAAGATCACTGGTCTaGTGTTGCAGCAGCCCCAGT +
Preference number: 2 (lower is better)
Translates to: VHNGKSYPGFSTHNLDSYERSLV*CCSSPS
Trigger: ACTGGGGCTGCTGCAACACCAGACCAGTGATCTTTC...GTAGCTGTCTAAGTTATGGGTGGAGAAGCCTGGGTATGACTTTCCGTTGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR GCA 90 bp TGCAGTACTGGTGGCCTCAACCCCTTTATGAAAACACATGTTCTCATTTGGTGTTCACTGGTCTGGTGTTaGAGCAGCCCCAGTGTTGAG +
Preference number: 2 (lower is better)
Translates to: CSTGGLNPFMKTHVLIWCSLVWC*SSPSVE
Trigger: CTCAACACTGGGGCTGCTGCAACACCAGACCAGTGA...ACACCAAATGAGAACATGTGTTTTCATAAAGGGGTTGAGGCCACCAGTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTAGGAATTCCATCTCCTaGCCCTTTCTTGTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKARNSIS*PFLVLQ
Trigger: CTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCT...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CCA 90 bp CCTGTAGAAGAGGGAATGCTTCCTAAATTCCGGAAGTCGCTGCAAGGATTCAGTCTTAGGAAAGATCACTaGTCTGGTGTTGCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: PVEEGMLPKFRKSLQGFSLRKDH*SGVAAA
Trigger: GGCTGCTGCAACACCAGACCAGTGATCTTTCCTAAG...ACTGAATCCTTGCAGCGACTTCCGGAATTTAGGAAGCATTCCCTCTTCTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CCA 90 bp CCTGTAGAAGAGGGAATGCTTCCTAAATTCCGGAAGTCGCTGCAAGGATTCAGTTCGCTGCAGTACTGGTaGCCTCAACCCCTTTATGAA +
Preference number: 2 (lower is better)
Translates to: PVEEGMLPKFRKSLQGFSSLQYW*PQPLYE
Trigger: TTCATAAAGGGGTTGAGGCCACCAGTACTGCAGCGA...ACTGAATCCTTGCAGCGACTTCCGGAATTTAGGAAGCATTCCCTCTTCTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR TCA 90 bp GTGACCACTATGGCAATACAGCATTTCATTATGGGACTGGCTACTTTGTATAAAGGCGGGTGGATCACTTaGGATCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: VTTMAIQHFIMGLATLYKGGWIT*DQEFET
Trigger: GGTCTCGAACTCCTGATCTCAAGTGATCCACCCGCC...TTTATACAAAGTAGCCAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR GCA 90 bp TGCACTTTGTGTTCACAAAGGGAAATGAGGCTCCATCAAACCCTGCAGAGCACAAGGAAGCAGGTTGTTTaGTCAGGCATCAGCAGAAAT +
Preference number: 2 (lower is better)
Translates to: CTLCSQREMRLHQTLQSTRKQVV*SGISRN
Trigger: ATTTCTGCTGATGCCTGAGCAAACAACCTGCTTCCT...TGTGCTCTGCAGGGTTTGATGGAGCCTCATTTCCCTTTGTGAACACAAAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR TCA 90 bp ACTGTACACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGAGAATCCAGCCCTTGTaGCCAGACCCCTGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: TVHQRERVVFSLMVYSLWRIQPL*PDPCRR
Trigger: TCTTCTACAGGGGTCTGGTCACAAGGGCTGGATTCT...CCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTGTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CCA 90 bp GTACACAACGGAAAGTCATACCCAGGCTTCTCCACCCATAACTTAGACAGCTACAATACAAAAATTAGCTaGTGTGGTGGCGCACACCTA +
Preference number: 2 (lower is better)
Translates to: VHNGKSYPGFSTHNLDSYNTKIS*CGGAHL
Trigger: TAGGTGTGCGCCACCACACCAGCTAATTTTTGTATT...GTAGCTGTCTAAGTTATGGGTGGAGAAGCCTGGGTATGACTTTCCGTTGTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR TCA 90 bp AAATCTAAACTTAGGTCAAGACCCCTACCTTCTCCAGGGATGCCAGGACCAGAGTTAAATTTCCAGACCTaGTTTCCTACTATCTGCATG +
Preference number: 2 (lower is better)
Translates to: KSKLRSRPLPSPGMPGPELNFQT*FPTICM
Trigger: CATGCAGATAGTAGGAAATCAGGTCTGGAAATTTAA...CTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR TCA 90 bp ACTGTACACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGGTTCACAAAGGGAAATaGGGCTCCATCAAACCCTGC +
Preference number: 2 (lower is better)
Translates to: TVHQRERVVFSLMVYSLWVHKGK*GSIKPC
Trigger: GCAGGGTTTGATGGAGCCTCATTTCCCTTTGTGAAC...CCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTGTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR GCA 90 bp CACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGCAAGAGAGGAAGCAGGTTGTTTaGTCAGGCATCAGCAGAAAT +
Preference number: 2 (lower is better)
Translates to: HQRERVVFSLMVYSLWQERKQVV*SGISRN
Trigger: ATTTCTGCTGATGCCTGAGCAAACAACCTGCTTCCT...CTCTTGCCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CCA 90 bp GTGACCACTATGGCAATACAGCATTTCATTATGGGACTGGCTACTTTGTATAAACTTAGGAAAGATCACTaGTCTGGTGTTGCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: VTTMAIQHFIMGLATLYKLRKDH*SGVAAA
Trigger: GGCTGCTGCAACACCAGACCAGTGATCTTTCCTAAG...TTTATACAAAGTAGCCAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR GCA 90 bp GTACACAACGGAAAGTCATACCCAGGCTTCTCCACCCATAACTTAGACAGCTACGGGGTTATAAGAAGCTaGATAATCAGTAAAAGGATA +
Preference number: 2 (lower is better)
Translates to: VHNGKSYPGFSTHNLDSYGVIRS*IISKRI
Trigger: TATCCTTTTACTGATTATGCAGCTTCTTATAACCCC...GTAGCTGTCTAAGTTATGGGTGGAGAAGCCTGGGTATGACTTTCCGTTGTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CCA 90 bp GTGACCACTATGGCAATACAGCATTTCATTATGGGACTGGCTACTTTGTATAAAAATTCGCTGCAGTACTaGTGGCCTCAACCCCTTTAT +
Preference number: 2 (lower is better)
Translates to: VTTMAIQHFIMGLATLYKNSLQY*WPQPLY
Trigger: ATAAAGGGGTTGAGGCCACCAGTACTGCAGCGAATT...TTTATACAAAGTAGCCAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR TCA 90 bp TTCCGGAAGTCGCTGCAAGGATTCAGTTTAAACTTTCATGATATTCTAATCTTAGTTCACAAAGGGAAATaGGGCTCCATCAAACCCTGC +
Preference number: 2 (lower is better)
Translates to: FRKSLQGFSLNFHDILILVHKGK*GSIKPC
Trigger: GCAGGGTTTGATGGAGCCTCATTTCCCTTTGTGAAC...TAAGATTAGAATATCATGAAAGTTTAAACTGAATCCTTGCAGCGACTTCCGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR TCA 90 bp CACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGCAAGAGGCCTCAACCCCTTTATaGAAACACATGTTCTCATTT +
Preference number: 2 (lower is better)
Translates to: HQRERVVFSLMVYSLWQEASTPL*KHMFSF
Trigger: AAATGAGAACATGTGTTTTCATAAAGGGGTTGAGGC...CTCTTGCCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CCA 90 bp TTCCGGAAGTCGCTGCAAGGATTCAGTTTAAACTTTCATGATATTCTAATCTTATCGCTGCAGTACTGGTaGCCTCAACCCCTTTATGAA +
Preference number: 2 (lower is better)
Translates to: FRKSLQGFSLNFHDILILSLQYW*PQPLYE
Trigger: TTCATAAAGGGGTTGAGGCCACCAGTACTGCAGCGA...TAAGATTAGAATATCATGAAAGTTTAAACTGAATCCTTGCAGCGACTTCCGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR TCA 90 bp GTGACCACTATGGCAATACAGCATTTCATTATGGGACTGGCTACTTTGTATAAAAACTACTACCAGTTTTaGAAAGATCCCTGGCGAAAG +
Preference number: 2 (lower is better)
Translates to: VTTMAIQHFIMGLATLYKNYYQF*KDPWRK
Trigger: CTTTCGCCAGGGATCTTTTCAAAACTGGTAGTAGTT...TTTATACAAAGTAGCCAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR TCA 90 bp GTGACCACTATGGCAATACAGCATTTCATTATGGGACTGGCTACTTTGTATAAAGTCAATCATGAAGTGTaGGTGTACACAACGGAAAGT +
Preference number: 2 (lower is better)
Translates to: VTTMAIQHFIMGLATLYKVNHEV*VYTTES
Trigger: ACTTTCCGTTGTGTACACTCACACTTCATGATTGAC...TTTATACAAAGTAGCCAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR TCA 90 bp TTCCGGAAGTCGCTGCAAGGATTCAGTTTAAACTTTCATGATATTCTAATCTTAGCCTCAACCCCTTTATaGAAACACATGTTCTCATTT +
Preference number: 2 (lower is better)
Translates to: FRKSLQGFSLNFHDILILASTPL*KHMFSF
Trigger: AAATGAGAACATGTGTTTTCATAAAGGGGTTGAGGC...TAAGATTAGAATATCATGAAAGTTTAAACTGAATCCTTGCAGCGACTTCCGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CAA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 3 (lower is better)
Translates to: PRARKAGGKASLAGCPARCGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR CCA 72 bp CTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTaGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGA +
Preference number: 3 (lower is better)
Translates to: LAGCPARRPSAH*SSGQPGKGGQG
Trigger: TCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR GCA 72 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGCGCTCACTGGTCTAGT +
Preference number: 3 (lower is better)
Translates to: ARKAGGKASLAG*PARRPSAHWSS
Trigger: ACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR CCA 72 bp GGGGGCGCCCATTTGTGGGACCAGAGGGAGAGGCAGTaGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACT +
Preference number: 3 (lower is better)
Translates to: GGAHLWDQRERQ*LKLHGQRPVTT
Trigger: AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CAA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCAGCACTGACCCCCAACTaGGGGCAGGGCAGCAAGAAG +
Preference number: 3 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSALTPN*GQGSKK
Trigger: CTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGC...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CAA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 3 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPCGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CAA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 3 (lower is better)
Translates to: QRGWHKDISALFPLTLTECGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
3UTR TCA 72 bp AGGACCTGGAACCTGTCGTCAACCTCAGCATCCTCATaGCCCCAGGACAGACGCAGTGGAGGCAGCAGGTAC +
Preference number: 3 (lower is better)
Translates to: RTWNLSSTSASS*PQDRRSGGSRY
Trigger: GTACCTGCTGCCTCCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAGGTTCCAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR-3UTR CAA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCGCATGTCAGTTTCTTTaGGGTTTGGACCAAAGAACC +
Preference number: 3 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSACQFL*GLDQRT
Trigger: GGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGC...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CAA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAAGCACTGACCCCCAACTaGGGGCAGGGCAGCAAGAAG +
Preference number: 3 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEALTPN*GQGSKK
Trigger: CTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGC...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CAA 90 bp TTCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTCTCCTGGCCCTTTCTaGTTCTCCAGCCCTGGCTTT +
Preference number: 3 (lower is better)
Translates to: FPGFLLTAAIPRPSWDALSPGPF*FSSPGF
Trigger: AAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGA...GAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR GCA 72 bp CTAAACTTAGGTCAAGACCCCTACCTTCTCCAGGGATaGCAGGACCAGAGAAGGGCAGAGGTCAGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: LNLGQDPYLLQG*QDQRRAEVRRG
Trigger: CCCCCTCCTGACCTCTGCCCTTCTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR GCA 72 bp GAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTaGTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCA +
Preference number: 3 (lower is better)
Translates to: ELGTWCQTSTRH*YLRKGEDLSGP
Trigger: TGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR CCA 72 bp TCCTCCGTGAGCCCCTGCAGTTTCCTGGTGTGTGCTTaGGGAGCTAGGGACATGGTGTCAAACCTCCACAAG +
Preference number: 3 (lower is better)
Translates to: SSVSPCSFLVCA*GARDMVSNLHK
Trigger: CTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCACGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR TCA 72 bp CTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTaGAAGGACCTGGAACCTGTCGTCAACCTCAGCATC +
Preference number: 3 (lower is better)
Translates to: LGPPTPNLWPKE*KDLEPVVNLSI
Trigger: GATGCTGAGGTTGACGACAGGTTCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR GCA 72 bp CTTGGACATGAGGGCTTACATGTCCTAGGGTGTGGGTaGCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTC +
Preference number: 3 (lower is better)
Translates to: LGHEGLHVLGCG*RPEGIPSPGPF
Trigger: GAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCCACACCCTAGGACATGTAAGCCCTCATGTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR GCA 72 bp AAGTCTGGGGCAGCCTCCTCAGAGGCAAATCTACACTaGAGCCAATCCCCCTCCAGAGAAGCCCTTGGAATC +
Preference number: 3 (lower is better)
Translates to: KSGAASSEANLH*SQSPSREALGI
Trigger: GATTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR CCA 72 bp CCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATaGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCCA +
Preference number: 3 (lower is better)
Translates to: PHVLGTAEVFCT*SLRRKAGPPGP
Trigger: TGGGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR GCA 72 bp TGGCTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTaGACATGGTCTCTACGGAGGAAAGCTGGTCCCCCT +
Preference number: 3 (lower is better)
Translates to: WLPHVLGTAEVF*TWSLRRKAGPP
Trigger: AGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR CCA 72 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATaGTGTCAAACCTCCACAAGGCACTGCTACCTCAGA +
Preference number: 3 (lower is better)
Translates to: AVSWCVLGELGT*CQTSTRHCYLR
Trigger: TCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CAA 90 bp ACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCTTTCTTCCTGTCTCCTGGCCCTTTCTaGTTCTCCAGCCCTGGCTTT +
Preference number: 3 (lower is better)
Translates to: TTQPCFLPTFIPAGPFFLSPGPF*FSSPGF
Trigger: AAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGA...CAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR TCA 72 bp TTCCCACTTTCATCCCAGCAGGCCCTTTCTTCCTGCTaGCAAAACACTGGCTCCCTCATGTTCTTGGCACAG +
Preference number: 3 (lower is better)
Translates to: FPLSSQQALSSC*QNTGSLMFLAQ
Trigger: CTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR CCA 72 bp AATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTaGCTTTTTATCCTAGGGCTGACCACCAGATCCCAG +
Preference number: 3 (lower is better)
Translates to: NSISWPFLVLQP*LFILGLTTRSQ
Trigger: CTGGGATCTGGTGGTCAGCCCTAGGATAAAAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR CCA 72 bp CTTCCTGCTGACAAAACACTGGCTCCCTCATGTTCTTaGCACAGCAGAAGTGTTCTGCACATGGTCTCTACG +
Preference number: 3 (lower is better)
Translates to: LPADKTLAPSCS*HSRSVLHMVST
Trigger: CGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CAA 90 bp CTCCAGAGAAGCCCTTGGAATCTCCCAGGCCATTTCACTACAAACTTATGTTTGCTGCATGAGGCTCCCTaGGACATGAGGGCTTACATG +
Preference number: 3 (lower is better)
Translates to: LQRSPWNLPGHFTTNLCLLHEAP*DMRAYM
Trigger: CATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAG...CAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR CCA 72 bp TCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTaGAATCTCCCAGGCCATTTCACTACAAACTTATGT +
Preference number: 3 (lower is better)
Translates to: STLQPIPLQRSP*NLPGHFTTNLC
Trigger: ACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
3UTR TCA 72 bp GCTGCCTCACCATTGAGATACTGGACCACTTGGGTGTaGCCACTATGGCAATACAGCATTTCATTATGGGAC +
Preference number: 3 (lower is better)
Translates to: AASPLRYWTTWV*PLWQYSISLWD
Trigger: GTCCCATAATGAAATGCTGTATTGCCATAGTGGTCACACCCAAGTGGTCCAGTATCTCAATGGTGAGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CAA 90 bp TGCAGTACTGGTGGCCTCAACCCCTTTATGAAAACACATGTTCTCATTTGGTGTACAAGAGGAAGCAGGTaGTTTGCTCAGGCATCAGCA +
Preference number: 3 (lower is better)
Translates to: CSTGGLNPFMKTHVLIWCTRGSR*FAQASA
Trigger: TGCTGATGCCTGAGCAAACAACCTGCTTCCTCTTGT...ACACCAAATGAGAACATGTGTTTTCATAAAGGGGTTGAGGCCACCAGTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR CCA 72 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTaGTCTGGTGTTGCAGCAGCCCCAGTGTTGAGAGAC +
Preference number: 3 (lower is better)
Translates to: GFRSITMLRKDH*SGVAAAPVLRD
Trigger: GTCTCTCAACACTGGGGCTGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CAA 90 bp CACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGCAAGAGGAGGAAGCAGGTTGTTaGCTCAGGCATCAGCAGAAA +
Preference number: 3 (lower is better)
Translates to: HQRERVVFSLMVYSLWQEEEAGC*LRHQQK
Trigger: TTTCTGCTGATGCCTGAGCAAACAACCTGCTTCCTC...CTCTTGCCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CAA 90 bp CACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGCAAGAGACAAGAGGAAGCAGGTaGTTTGCTCAGGCATCAGCA +
Preference number: 3 (lower is better)
Translates to: HQRERVVFSLMVYSLWQETRGSR*FAQASA
Trigger: TGCTGATGCCTGAGCAAACAACCTGCTTCCTCTTGT...CTCTTGCCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CAA 90 bp GTACACAACGGAAAGTCATACCCAGGCTTCTCCACCCATAACTTAGACAGCTACGAAATAATCTGTACCTaGGGGGTTATAAGAAGCTGC +
Preference number: 3 (lower is better)
Translates to: VHNGKSYPGFSTHNLDSYEIICT*GVIRSC
Trigger: GCAGCTTCTTATAACCCCCAAGGTACAGATTATTTC...GTAGCTGTCTAAGTTATGGGTGGAGAAGCCTGGGTATGACTTTCCGTTGTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR-3UTR CAA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGGCATGTCAGTTTCTTTaGGGTTTGGACCAAAGAACC +
Preference number: 3 (lower is better)
Translates to: TLTEDFHVDMASTCRTILACQFL*GLDQRT
Trigger: GGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGC...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
3UTR-3UTR CAA 90 bp ACTGTACACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGGAAATAATCTGTACCTaGGGGGTTATAAGAAGCTGC +
Preference number: 3 (lower is better)
Translates to: TVHQRERVVFSLMVYSLWEIICT*GVIRSC
Trigger: GCAGCTTCTTATAACCCCCAAGGTACAGATTATTTC...CCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTGTACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCCGGCCCCGTGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPRPRGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCG...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRASLAG*PARRPS
Trigger: GCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGC...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLASLAG*PARRPS
Trigger: GCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGC...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGGGGCAGGGCTGCTGCTaGCCCGGGCACGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAGQGCC*PGHAKQ
Trigger: CTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCC...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGGTGGGGCAGGGCTGCTaGTGCCCCGGGCACGCAAAG +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWVGQGC*CPGHAK
Trigger: CTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCAC...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGGGTGTGGGGCAGGGCTaGTGCTGCCCCGGGCACGCA +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGGVGQG*CCPGHA
Trigger: TGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACC...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGCTCCCGCCTGCGGCCTaGGAATGCCGAAGCGGACCG +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTLPPAA*ECRSGP
Trigger: CGGTCCGCTTCGGCATTCGCAGGCCGCAGGCGGGAG...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR TCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCGGGAAGAGCCGTaGGGAGGTAGGAGACGTCGG +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARRREEP*GGRRRR
Trigger: CCGACGTCTCCTACCTCCTCACGGCTCTTCCCGGCG...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR TCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCGGCCCCTTGTGTGCCTaGCCGGCTCACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPGPLCA*PAHQPQ
Trigger: CTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCC...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGCTGGGAACCACCCCTaGAGCGGGGGCTGTCCCACT +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARAGNHP*SGGCPT
Trigger: AGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGC...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGGGCAGGGCTGCTGCTaGCCCGGGCACGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLGQGCC*PGHAKQ
Trigger: CTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCC...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGTGGCGGACCAATGGGTaGTGGCCCTGCCGCCACGAC +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWWRTNG*WPCRHD
Trigger: GTCGTGGCGGCAGGGCCAGCACCCATTGGTCCGCCA...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGACAATGTCGGCCCCGTaGTCGGTGCGGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTATMSAP*SVRALA
Trigger: TGCCAGGGCCCGCACCGACCACGGGGCCGACATTGT...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGGAGGGCGGAGGGCTGTaGCGGACCAATGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAEGGGL*RTNGCW
Trigger: CCAGCACCCATTGGTCCGCCACAGCCCTCCGCCCTC...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR CCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGGCTCAGGAGGGACCCTaGCAGGCTTGGGCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWAQEGP*QAWAGL
Trigger: CAACCCGGCCCAAGCCTGCCAGGGTCCCTCCTGAGC...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGCTGGGAACCACCCCTaGAGCGGGGGCTGTCCCACT +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLAGNHP*SGGCPT
Trigger: AGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSASLAG*PARRPS
Trigger: GCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGC...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTGTGGGGCAGGGCTGCTaGTGCCCCGGGCACGCAAAG +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSAVGQGC*CPGHAK
Trigger: CTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCAC...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGTGTGGGGCAGGGCTaGTGCTGCCCCGGGCACGCA +
Preference number: 4 (lower is better)
Translates to: RPSAHWSSGQPGKGGQGPGVGQG*CCPGHA
Trigger: TGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACC...GGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGTGGCAGTGGGCTTCTTaGGCAGGAGCGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAWQWAS*AGAWRG
Trigger: GCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCA...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGACAATGTCGGCCCCGTaGTCGGTGCGGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGTMSAP*SVRALA
Trigger: TGCCAGGGCCCGCACCGACCACGGGGCCGACATTGT...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCGCCGCCAGGGAAGTGTaGGGGGCGGGAGACAATGTC +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSAAREV*GAGDNV
Trigger: GACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGC...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGCGCCCAAGCGCTCACTaGTCTAGTGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTRPSAH*SSGQPG
Trigger: CCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTaGTCTAGTGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARRPSAH*SSGQPG
Trigger: CCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCGGACCAATGGGTGCTaGCCCTGCCGCCACGACGTC +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLRTNGC*PCRHDV
Trigger: GACGTCGTGGCGGCAGGGCCAGCACCCATTGGTCCG...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR CCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGACGGCAGGGCGTTTaGGTGGGGCAGCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARRRQGV*VGQLAL
Trigger: TAGTGCCAGCTGCCCCACCCAAACGCCCTGCCGTCG...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGGGGGGCGCCCATTTGTaGGACCAGAGGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWGGAHL*DQRERQ
Trigger: CTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCC...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCAGCAGTGGGCTTCTTaGGCAGGAGCGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARQQWAS*AGAWRG
Trigger: GCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCTG...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGCATGGGTGTGGCCTTaGCTCGGCTGGGAACCACCC +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLAWVWP*LGWEPP
Trigger: GGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGGCAGCACTTCCTCCGTaGGCCCCTGCAGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWAALPP*APAVSW
Trigger: CCAGGAAACTGCAGGGGCTCACGGAGGAAGTGCTGC...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCATCCAGGGCCCTAAGCTaGCCACATCCTCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPSRALS*PHPPAG
Trigger: CCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGA...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCAAGGGCCCCTTGTGTaGCTGACCGGCTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGQGPLV*LTGSPA
Trigger: GGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTG...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGCAAGGGCCCCTTGTGTaGCTGACCGGCTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLAQGPLV*LTGSPA
Trigger: GGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTG...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLAGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTACAATGTCGGCCCCGTaGTCGGTGCGGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSATMSAP*SVRALA
Trigger: TGCCAGGGCCCGCACCGACCACGGGGCCGACATTGT...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCCGCCAGGGAAGTGTaGGGGGCGGGAGACAATGTC +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLAAREV*GAGDNV
Trigger: GACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGC...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCACGCCCAAGCGCTCACTaGTCTAGTGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPRPSAH*SSGQPG
Trigger: CCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCGACGGCAGGGCGTTTaGGTGGGGCAGCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGRRQGV*VGQLAL
Trigger: TAGTGCCAGCTGCCCCACCCAAACGCCCTGCCGTCG...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGAGCTGGCTTGGATGGTaGGGCCCGCTTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLSWLGW*GPLLRS
Trigger: GCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCT...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCCCAGCACGGCGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCATGGGTGTGGCCTTaGCTCGGCTGGGAACCACCC +
Preference number: 4 (lower is better)
Translates to: AQHGAQALTGLVDSPGKGAWVWP*LGWEPP
Trigger: GGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGC...CCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGATTGAGGCCACTGGCTaGAGTGGGGGCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLIEATG*SGGASF
Trigger: GAAGCTGGCGCCCCCACTTCAGCCAGTGGCCTCAAT...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGACCGTACGCGGCAGTaGGAGAGGCTGTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARDRTRQ*ERLSAC
Trigger: ACAAGCAGACAGCCTCTCTCACTGCCGCGTACGGTC...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCACAGGCTTGCCCTTACTaGGCTGACCGTACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPQACPY*ADRTRQ
Trigger: CTGCCGCGTACGGTCAGCTCAGTAAGGGCAAGCCTG...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCGCTGGGAACCACCCCTaGAGCGGGGGCTGTCCCACT +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSAGNHP*SGGCPT
Trigger: AGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGC...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCACGTCTCTGCAGAGCTaGCCGAGCCGCGGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSTSLQS*PSRGRL
Trigger: CAACCGCCCGCGGCTCGGGCAGCTCTGCAGAGACGT...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR GCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCGTGGTGGGAGCTGGCTaGTTAGGGAGAGAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPVVGAG*LGREVG
Trigger: GCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCAC...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTCCTCCTGCACCCCTCTTCCCTaGCGCACCGCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AAIPRPSWDALCGPCLSSCTPLP*RTASRA
Trigger: GGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCA...GGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGGGCAGAAGCTGGCTTaGATGGTGAGGCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARGQKLA*MVRPAS
Trigger: AGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCC...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGTCCTCCACGGAGCAGTaGCGCAGTGATGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTASSTEQ*RSDGAR
Trigger: TCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGA...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCCTCTCTCTCAGAGTCTaGGCGCCCGGAGCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRLSLRV*APGARR
Trigger: TCTCCTCGCTCCGGGCGCCCAGACTCTGAGAGAGAG...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR TCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGCGGGGGCTGTCCCACTaGGAGTGGTGGTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTRGLSH*EWWFSS
Trigger: TGAAGAAAACCACCACTCTCAGTGGGACAGCCCCCG...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGGCCTCCTCCAGGCTaGTGCTTGATGTTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARRPPPG*CLMFSV
Trigger: CACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCG...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCCGGCCTCCTCCAGGCTaGTGCTTGATGTTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSRPPPG*CLMFSV
Trigger: CACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCG...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCGGAGCAGTGGCGCAGTaGTGGGGCAAGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRGAVAQ*WGKTKA
Trigger: TGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCC...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGGAGCAGTGGCGCAGTaGTGGGGCAAGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLGAVAQ*WGKTKA
Trigger: TGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGGAAAGTAGGTGCAGCTaGCTGCCCCACATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAESRCS*LPHILQ
Trigger: CTGCAGGATGTGGGGCAGTCAGCTGCACCTACTTTC...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTATTGAGGCCACTGGCTaGAGTGGGGGCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSAIEATG*SGGASF
Trigger: GAAGCTGGCGCCCCCACTTCAGCCAGTGGCCTCAAT...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGGGTCTCAATCTGCAGTaGCATGGGAGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAGLNLQ*HGRREG
Trigger: CCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACC...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR TCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGTTGCCCTTACTGAGCTaGCCGTACGCGGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWLPLLS*PYAAVR
Trigger: TCTCACTGCCGCGTACGGTCAGCTCAGTAAGGGCAA...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGGGGGGAACTGAGAGGTaGGAACATTCAGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWGGTER*EHSDRA
Trigger: GGCCCTGTCTGAATGTTCTCACCTCTCAGTTCCCCC...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGTGGAGGGGCTCCTACTaGTTGGGCCAGTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTWRGSY*LGQLRQ
Trigger: TTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCA...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCGGCCCCGTGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 4 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPRPRGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCG...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCAGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPASLAG*PARRPS
Trigger: GCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGC...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCACCTCGGCCGGCAAGCTaGACTTTTTCCCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPPRPAS*TFSPFL
Trigger: CAGGAACGGGGAAAAAGTGCAGCTTGCCGGCCGAGG...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGACAGAGGAGCCTCGCTaGCACCGCCCTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLTEEPR*HRPQSS
Trigger: TGAAGACTGAGGGCGGTGGCAGCGAGGCTCCTCTGT...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCTCCTCCGTGAGCCCCTaGAGTTTCCTGGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPSSVSP*SFLVCA
Trigger: AGCACACACCAGGAAACTGCAGGGGCTCACGGAGGA...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCCCCGGCCTTCTCAGGTaGTCTGGAGTGGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRPGLLR*SGVEDP
Trigger: AGGATCCTCCACTCCAGAGCACCTGAGAAGGCCGGG...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCCAGAGCCGTCTGTCCTaGCTGTTTCTCTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSQSRLS*LFLSSL
Trigger: CAGCGAGGAGAGAAACAGCCAGGACAGACGGCTCTG...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGGGCAGAAGCTGGCTTaGATGGTGAGGCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLGQKLA*MVRPAS
Trigger: AGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCCCCAGATCTGGAGGCTaGGGCAGAAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRPRSGG*GRSWLG
Trigger: TCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGG...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGATCTGGAGGCTaGGGCAGAAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLPRSGG*GRSWLG
Trigger: TCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGG...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGTCTTGGACCCAGATCTaGAGGCTGGGGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTASWTQI*RLGQKL
Trigger: CAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGA...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCTCTTGGACCCAGATCTaGAGGCTGGGGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSSWTQI*RLGQKL
Trigger: CAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGA...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTATCCTCCACGGAGCAGTaGCGCAGTGATGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLSSTEQ*RSDGAR
Trigger: TCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGA...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGCGGGGGCTGTCCCACTaGGAGTGGTGGTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLARGLSH*EWWFSS
Trigger: TGAAGAAAACCACCACTCTCAGTGGGACAGCCCCCG...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCGGGGGCTGTCCCACTaGGAGTGGTGGTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGRGLSH*EWWFSS
Trigger: TGAAGAAAACCACCACTCTCAGTGGGACAGCCCCCG...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTACGGGGGCTGTCCCACTaGGAGTGGTGGTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLRGLSH*EWWFSS
Trigger: TGAAGAAAACCACCACTCTCAGTGGGACAGCCCCCG...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCACGGCCTCCTCCAGGCTaGTGCTTGATGTTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPRPPPG*CLMFSV
Trigger: CACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCG...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAGTTGAGCCATGTCCTTaGCTGGGGCCACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPVEPCP*LGPPLL
Trigger: AAGCAGAGGTGGCCCCAGTCAAGGACATGGCTCAAC...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCGTTGAGCCATGTCCTTaGCTGGGGCCACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRVEPCP*LGPPLL
Trigger: AAGCAGAGGTGGCCCCAGTCAAGGACATGGCTCAAC...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGGTTGAGCCATGTCCTTaGCTGGGGCCACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGVEPCP*LGPPLL
Trigger: AAGCAGAGGTGGCCCCAGTCAAGGACATGGCTCAAC...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGTCTCAATCTGCAGTaGCATGGGAGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLAGLNLQ*HGRREG
Trigger: CCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACC...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR TCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCGCAGCACTTCCTCCGTaGGCCCCTGCAGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSAALPP*APAVSW
Trigger: CCAGGAAACTGCAGGGGCTCACGGAGGAAGTGCTGC...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGTGTCTGGCCCCTCTATaGGTCCCAGATGGAACTCGG +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLCLAPL*VPDGTR
Trigger: CCGAGTTCCATCTGGGACTCATAGAGGGGCCAGACA...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGGAATGGTGGTGGGTaGATGCTCAATAATGGGGGC +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARRNGGG*MLNNGG
Trigger: GCCCCCATTATTGAGCATTCACCCACCACCATTCCG...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCTGCCACCTTAGGCTaGGTCATCTCTTTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAPATLG*VISLGS
Trigger: GGAGCCTAAAGAGATGACTCAGCCTAAGGTGGCAGG...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTGGAGGGGCTCCTACTaGTTGGGCCAGTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRWRGSY*LGQLRQ
Trigger: TTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCA...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCGCCACGACGTCTCTaGAGAGCTGCCCGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSPPRRL*RAARAA
Trigger: CGCGGCTCGGGCAGCTCTGCAGAGACGTCGTGGCGG...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR GCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCATGCACCCCTCTTCCCTaGCGCACCGCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSCTPLP*RTASRA
Trigger: GGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCA...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCTCCACTGCTCTCCCTaGTTTCGCTCCTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLLHCSP*FRSWSS
Trigger: AGAGCTCCAGGAGCGAAAGCAGGGAGAGCAGTGGAG...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGTCCATTCGGCACTCTaGAGGCTTGCCCTTACTGAG +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTVHSAL*RLALTE
Trigger: CTCAGTAAGGGCAAGCCTGCAGAGTGCCGAATGGAC...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCCCTGCCCCCTGGATTTaGTCTTGGCAGCTCACATCT +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSPAPWI*SWQLTS
Trigger: AGATGTGAGCTGCCAAGAGCAAATCCAGGGGGCAGG...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCCCAGATCTGGAGGCTaGGGCAGAAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSAPRSGG*GRSWLG
Trigger: TCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGG...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCTTGGACCCAGATCTaGAGGCTGGGGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRSWTQI*RLGQKL
Trigger: CAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGA...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGTGGAGGTGCTCTTTaGGCGACTCAAGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLAGGGAL*ATQVSW
Trigger: CCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACC...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGGTGGAGGTGCTCTTTaGGCGACTCAAGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLGGGAL*ATQVSW
Trigger: CCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACC...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCTTTTTGGAGACTATCTaGACCCGGCCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSFLETI*TRPPPG
Trigger: GCCTGGAGGAGGCCGGGTCCAGATAGTCTCCAAAAA...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCTTTTTGGAGACTATCTaGACCCGGCCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPFLETI*TRPPPG
Trigger: GCCTGGAGGAGGCCGGGTCCAGATAGTCTCCAAAAA...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAATCCTCCAGCGGGGGTaGCATAAGGATATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLILQRG*HKDISA
Trigger: GGCGGAGATATCCTTATGCCACCCCCGCTGGAGGAT...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCATCCTTCTAGGGCTCTaGCCTCTCCTGGTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSILLGL*PLLVGS
Trigger: AGAGCCTACCAGGAGAGGCCAGAGCCCTAGAAGGAT...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTATACCACCCCAATCACTaGGCAGCCAGGGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLYHPNH*AARGDA
Trigger: AGCATCACCCCTGGCTGCCCAGTGATTGGGGTGGTA...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGGTGGAGGTGCTCTTTaGGCGACTCAAGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARGGGAL*ATQVSS
Trigger: ACTGCTGACTTGAGTCGCCCAAAGAGCACCTCCACC...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp GCCCAGCACGGCGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGCGGGGGCTGTCCCACTaGGAGTGGTGGTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AQHGAQALTGLVDSPGKGRGLSH*EWWFSS
Trigger: TGAAGAAAACCACCACTCTCAGTGGGACAGCCCCCG...CCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGTGGGCTTCTTGTCTATaGAAGGAGTTGTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAWASCL*KELWRA
Trigger: GGCCCTCCACAACTCCTTTCATAGACAAGAAGCCCA...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGTGGGCTTCTTGTCTATaGAAGGAGTTGTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARWASCL*KELWRA
Trigger: GGCCCTCCACAACTCCTTTCATAGACAAGAAGCCCA...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCCTCCAGGCTGATGCTTaGTGTTTTCCGTGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSLQADA*CFPWSQ
Trigger: TTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAG...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCTCCAGGCTGATGCTTaGTGTTTTCCGTGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARLQADA*CFPWSQ
Trigger: TTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAG...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGAGTGGAGGATCCTTTaGGGGAACTCTGACCACTCC +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLEWRIL*GNSDHS
Trigger: GGAGTGGTCAGAGTTCCCTCAAAGGATCCTCCACTC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR GCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGTGGAACTGGTGGAGGTaGTCTTTGGGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARWNWWR*SLGDSS
Trigger: ACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCA...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGTGGAACTGGTGGAGGTaGTCTTTGGGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAWNWWR*SLGDSS
Trigger: ACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCA...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCTGGAACTGGTGGAGGTaGTCTTTGGGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSWNWWR*SLGDSS
Trigger: ACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCA...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCAGGCTGGGAACCACCCCTaGAGCGGGGGCTGTCCCACT +
Preference number: 4 (lower is better)
Translates to: GAGPGICPERQPVGLNLQAGNHP*SGGCPT
Trigger: AGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGC...CTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR GCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCGGCCCCGTGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPRPRGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCG...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCACGGCCCCGTGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 4 (lower is better)
Translates to: QTSTRHCYLRKGEDLSGPRPRGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCG...TGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GTGAGCCCCTGCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: VSPCSFLVCAWGARDMVSASLAG*PARRPS
Trigger: GCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGC...TGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCGCGAGCCTAGCGGGCTaGCCAGCACGGCGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: QQKCSAHGLYGGKLVPLAASLAG*PARRPS
Trigger: GCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGC...GGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCGGGCAGGGCTGCTGCTaGCCCGGGCACGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGIGQGCC*PGHAKQ
Trigger: CTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCC...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TCTGCAGTGACATGGGAGGAGGGAAGGGAGAGGGGAACAGGGGAGACAAGAGGGGGGCAGGGCTGCTGCTaGCCCGGGCACGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SAVTWEEGRERGTGETRGGQGCC*PGHAKQ
Trigger: CTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCC...CCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR GCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCAGCCATTCTGCACCACTaGAACTGCCCGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSAILHH*NCPPPP
Trigger: CGGCGGCGGCGGGCAGTTGCAGTGGTGCAGAATGGC...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGTTCCCCTTCCCTTCCTaGTTTTGCCATCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTFPFPS*FCHHLP
Trigger: TGGCAGGTGATGGCAAAAGCAGGAAGGGAAGGGGAA...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGAGGCCTTCCTTCTTCTaGCCTGGCTATTCCATCACG +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTRPSFF*PGYSIT
Trigger: CGTGATGGAATAGCCAGGCCAGAAGAAGGAAGGCCT...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGGAGCTCCTTGTTCGGTaGGGTGGTGATGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAELLVR*GGDVIS
Trigger: GGAAATGACATCACCACCCCACCGAACAAGGAGCTC...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGTTTCTTCTCTGGGCTTaGTGGGAGCTCCTTGTTCGG +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARFLLWA*WELLVR
Trigger: CCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAA...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCAGTCTGAGTGCTCTTaGACCCAGATCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLQSECS*TQIWRL
Trigger: CAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTG...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCTCTTCATGGAACTGGTaGAGGTGCTCTTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSSSWNW*RCSLGD
Trigger: GTCGCCCAAAGAGCACCTCCACCAGTTCCATGAAGA...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCGTGGAGCCAACCTTaGAGCGGACATTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAPWSQP*SGHSSD
Trigger: ATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGG...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCGATCCCACCTTGGCCTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATC...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCACCTCCTGCAGGTAGGTaGCCCACATTATCGAGGGAT +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPPPAGR*PTLSRD
Trigger: ATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGG...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 4 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCGCCGCCAGGGAAGTGTaGGGGGCGGGAGACAATGTC +
Preference number: 4 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLAAREV*GAGDNV
Trigger: GACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGC...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTCCGCCGAGACGGAGCTaGGGCAGAAGGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRCGPWHLPGTSACRSQSPPRRS*GRREPG
Trigger: TCCTGGCTCCCTTCTGCCCCAGCTCCGTCTCGGCGG...AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCAGCGCTGCCTCAGAGATaGCCGGCTCCTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPALPQR*PAPPQQ
Trigger: CTGCTGGGGAGGAGCCGGCCATCTCTGAGGCAGCGC...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGAACTCGGAGGTCTTCTaGTGTACCGAGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLANSEVF*CTEFPS
Trigger: GGAGGGGAACTCGGTACACCAGAAGACCTCCGAGTT...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGAGAGCCTTGAGCCACTaGATGAAAGCTGGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTARALSH*MKAGVP
Trigger: TGGAACCCCAGCTTTCATCCAGTGGCTCAAGGCTCT...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGAGGAGCAGTGGCGCAGTaGTGGGGCAAGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGGAVAQ*WGKTKA
Trigger: TGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCC...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACC +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLAMHLQD*GQPFCT
Trigger: GGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCAT...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCACTCCCTTCTACTCCATaGCCACCATTGGCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPLPSTP*PPLARS
Trigger: ACTCCTAGCCAATGGTGGTCATGGAGTAGAAGGGAG...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGGAAGTCTTTGCAGGTTaGGTGGTGGCCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWEVFAG*VVAKGF
Trigger: AAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTC...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGGCCCCTTGTGTGCCTaGCCGGCTCACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSGPLCA*PAHQPQ
Trigger: CTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCC...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGGTCAGGAGGGGGCATaGGGAGGCCAAGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSGQEGA*GGQVWG
Trigger: GCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACC...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGTTGCAACAGTCTGAGTaGTCTTGGACCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWLQQSE*SWTQIW
Trigger: CCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAA...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCATGGAACTGGTGGAGGTaGTCTTTGGGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPWNWWR*SLGDSS
Trigger: ACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCA...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGCTGGGAACCACCCCTaGAGCGGGGGCTGTCCCACT +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSAGNHP*SGGCPT
Trigger: AGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGC...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCCCTCCACCAGGCTTGTaGTTGATGTTAGCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPPPPGL*LMLALD
Trigger: GTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGG...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCGGCCCCGTGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSRPRGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCG...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCAGTGGGGCAGGGCTGCTaGTGCCCCGGGCACGCAAAG +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPVGQGC*CPGHAK
Trigger: CTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCAC...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGTGGGGCAGGGCTGCTaGTGCCCCGGGCACGCAAAG +
Preference number: 4 (lower is better)
Translates to: GCRPEGIPSPGPFLFSSPVGQGC*CPGHAK
Trigger: CTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCAC...AGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCGGTGTGGGGCAGGGCTaGTGCTGCCCCGGGCACGCA +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSGVGQG*CCPGHA
Trigger: TGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACC...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGGACAGGCCATTCTGCACCACTaGAACTGCCCGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: STRHCYLRKGEDLSGPGQAILHH*NCPPPP
Trigger: CGGCGGCGGCGGGCAGTTGCAGTGGTGCAGAATGGC...CTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGAGGAGCCTTTGCATCTaGAATGGGCTTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTARSLCI*NGLWLH
Trigger: GTGAAGCCAAAGCCCATTGCAGATGCAAAGGCTCCT...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGAGGAGCCTTTGCATCTaGAATGGGCTTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTRSLCI*NGLWLH
Trigger: GTGAAGCCAAAGCCCATTGCAGATGCAAAGGCTCCT...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCATGCACCCCTCTTCCCTaGCGCACCGCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QTSTRHCYLRKGEDLSGPCTPLP*RTASRA
Trigger: GGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCA...TGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGGCTGCACCCCTCTTCCCTaGCGCACCGCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CRPEGIPSPGPFLFSSPGCTPLP*RTASRA
Trigger: GGCCCTGGAGGCGGTGCGGCAGGGAAGAGGGGTGCA...GCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGGGAATGGGACAGAGATaGCAAAACCAGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWGMGQR*QNQPLG
Trigger: ACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCC...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGTCATCTCTCCCTCAATaGCCCTCTCTCCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLSSLPQ*PSLLKQ
Trigger: CTGCTTGAGGAGAGAGGGGCATTGAGGGAGAGATGA...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGATTCAGACAGGGCCCTaGGCACTGCCTTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGIQTGP*ALPFSA
Trigger: AGCAGAAAAAGGCAGTGCGCAGGGCCCTGTCTGAAT...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGAGTCTTCAGGTGGGGTaGAGGCTGTGGTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWSLQVG*RLWFVF
Trigger: GAATACAAACCACAGCCTGCACCCCACCTGAAGACT...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGTGTTTCTCTCCTCGCTaGCAAACCTGCGAGCATGAA +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARCFSPR*QTCEHE
Trigger: TTCATGCTCGCAGGTTTGCCAGCGAGGAGAGAAACA...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGAGGCCTTCCTTCTTCTaGCCTGGCTATTCCATCACG +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLRPSFF*PGYSIT
Trigger: CGTGATGGAATAGCCAGGCCAGAAGAAGGAAGGCCT...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAGAGCTCCTTGTTCGGTaGGGTGGTGATGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPELLVR*GGDVIS
Trigger: GGAAATGACATCACCACCCCACCGAACAAGGAGCTC...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGTTTCTTCTCTGGGCTTaGTGGGAGCTCCTTGTTCGG +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGFLLWA*WELLVR
Trigger: CCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAA...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGTGGAGGTGCTCTTTaGGCGACTCAAGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPSAHWSSGQPGKGGQGPGGGAL*ATQVSW
Trigger: CCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACC...GGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTACCGTGGAGCCAACCTTaGAGCGGACATTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLPWSQP*SGHSSD
Trigger: ATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGG...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCCCGTGGAGCCAACCTTaGAGCGGACATTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRPWSQP*SGHSSD
Trigger: ATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGG...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCCCAGCACGGCGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGCCTCCTGCAGGTAGGTaGCCCACATTATCGAGGGAT +
Preference number: 4 (lower is better)
Translates to: AQHGAQALTGLVDSPGKGPPAGR*PTLSRD
Trigger: ATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGG...CCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTAGTGCCATGTCCTTaGCGAGGGCCATCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGLVPCP*RGPSLF
Trigger: AAACAGAGATGGCCCTCGCCAAGGACATGGCACTAG...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCGGCCACCTCCATTTCTaGAGGCAGACATACGTTCTT +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPGHLHF*RQTYVL
Trigger: AAGAACGTATGTCTGCCTCCAGAAATGGAGGTGGCC...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGAATGGTGGTGGGAGCTaGCTGCTTAGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLNGGGS*LLRERS
Trigger: ACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATT...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCCTGTGCACTTGCAATTaGGCCGGCTGTTTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSLCTCN*AGCFSD
Trigger: GTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAG...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGGGGGCGCCCATTTGTaGGACCAGAGGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GRCGPWHLPGTSACRSQSGGAHL*DQRERQ
Trigger: CTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCC...AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCTCCAGAGAAGCCCTTaGAATCTCCCAGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLLQRSP*NLPGHF
Trigger: GAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGGCTCCCTCATGTTCTTaGCACAGCAGAAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWAPSCS*HSRSVL
Trigger: CAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGC...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCCCCTGCTTTCGCTCCTaGAGCTCTAATACCACCTAC +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRPCFRS*SSNTTY
Trigger: GTAGGTGGTATTAGAGCTCCAGGAGCGAAAGCAGGG...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCTGCCAAGATCCCTCTaGGGTTCAAGTGAGTCAACA +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTALPRSL*GSSEST
Trigger: TGTTGACTCACTTGAACCCCAGAGGGATCTTGGCAG...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGACCTGTACCAACACTTaGCCCTGCAGCTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLATCTNT*PCSCSE
Trigger: TTCTGAGCAGCTGCAGGGCCAAGTGTTGGTACAGGT...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGAGCTGGCTTGGATGGTaGGGCCCGCTTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPSWLGW*GPLLRS
Trigger: GCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCT...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCGTTTTTGCAACAGTCTaGGTGCTCTTGGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSVFATV*VLLDPD
Trigger: ATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAAC...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGGTTTTTGCAACAGTCTaGGTGCTCTTGGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWVFATV*VLLDPD
Trigger: ATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAAC...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTGCATGGGTGTGGCCTTaGCTCGGCTGGGAACCACCC +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTAWVWP*LGWEPP
Trigger: GGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGC...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCGCATGGGTGTGGCCTTaGCTCGGCTGGGAACCACCC +
Preference number: 4 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLAWVWP*LGWEPP
Trigger: GGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGC...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTTGGGCTTCTTGTCTATaGAAGGAGTTGTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSAWASCL*KELWRA
Trigger: GGCCCTCCACAACTCCTTTCATAGACAAGAAGCCCA...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCCTCTAGTGTGGCAATaGAGTCCCGCTTTATCTCTC +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGPLVWQ*SPALSL
Trigger: GAGAGATAAAGCGGGACTTCATTGCCACACTAGAGG...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp GGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTTTGAGGGCTGGGACCTaGTCCTCAGTCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GRCGPWHLPGTSACRSQSLRAGT*SSVRAT
Trigger: GGTGGCCCTGACTGAGGATCAGGTCCCAGCCCTCAA...AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR TCA 90 bp GGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTATTGAGGCCACTGGCTaGAGTGGGGGCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GRCGPWHLPGTSACRSQSIEATG*SGGASF
Trigger: GAAGCTGGCGCCCCCACTTCAGCCAGTGGCCTCAAT...AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR TCA 90 bp TGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGGCGGCCCCTTGTGTGCCTaGCCGGCTCACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: CRPEGIPSPGPFLFSSPGGPLCA*PAHQPQ
Trigger: CTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCC...GCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCAGCAGCACTTCCTCCGTaGGCCCCTGCAGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSAALPP*APAVSW
Trigger: CCAGGAAACTGCAGGGGCTCACGGAGGAAGTGCTGC...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCGACACAGGTAATGGCTaGGCCATAAGCAAATCGAGA +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPDTGNG*AISKSR
Trigger: TCTCGATTTGCTTATGGCTCAGCCATTACCTGTGTC...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR TCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAGTTGCCCGTCCATGCTaGCATTCAGCCCAATTTCAT +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPVARPC*HSAQFH
Trigger: ATGAAATTGGGCTGAATGTCAGCATGGACGGGCAAC...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCTGCTGCTGTGGGTTTTaGAACTACACCCATAACCTC +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPCCCGF*NYTHNL
Trigger: GAGGTTATGGGTGTAGTTTCAAAACCCACAGCAGCA...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGATATAATCCAGCAGTaGCGAGTTCCTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARDIIQQ*RVPSSQ
Trigger: CTGGGAAGAAGGAACTCGGCACTGCTGGATTATATC...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCGCCCTTTTTCCTTGCTaGTTCCTTCAGGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPALFPC*FLQESA
Trigger: AGCAGATTCCTGAAGGAAGCAGCAAGGAAAAAGGGC...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGAATTTCTTTCTTCCCTaGCAGAGCCGTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGNFFLP*QSRLSW
Trigger: CCAGGACAGACGGCTCTGGCAGGGAAGAAAGAAATT...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTGCTGGGAACCACCCCTaGAGCGGGGGCTGTCCCACT +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPAGNHP*SGGCPT
Trigger: AGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGC...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCCCTCCACCAGGCTTGTaGTTGATGTTAGCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRPPPGL*LMLALD
Trigger: GTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGG...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCTCCACCAGGCTTGTaGTTGATGTTAGCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLPPPGL*LMLALD
Trigger: GTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGG...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGGGGCAGGGCTGCTGCTaGCCCGGGCACGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRGQGCC*PGHAKQ
Trigger: CTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCC...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAGGTGTGGGGCAGGGCTaGTGCTGCCCCGGGCACGCA +
Preference number: 4 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTGVGQG*CCPGHA
Trigger: TGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCACACC...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTGCCATTCTGCACCACTaGAACTGCCCGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPAILHH*NCPPPP
Trigger: CGGCGGCGGCGGGCAGTTGCAGTGGTGCAGAATGGC...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GCCCAGCACGGCGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGATTCCATGGATGGCTaGATGTCCTTGGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: AQHGAQALTGLVDSPGKGDSMDG*MSLASV
Trigger: GACACTGGCCAAGGACATGCAGCCATCCATGGAATC...CCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR GCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGGTGGAGTCACATCCTTaGCCAGAGCCATTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWVESHP*PEPFLF
Trigger: AAACAGAAATGGCTCTGGGCAAGGATGTGACTCCAC...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGACTGCCCCACATCCTaGAGAGATTCTAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTDCPTS*RDSKWE
Trigger: TTCCCATTTAGAATCTCTGCAGGATGTGGGGCAGTC...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCGACTGCCCCACATCCTaGAGAGATTCTAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSDCPTS*RDSKWE
Trigger: TTCCCATTTAGAATCTCTGCAGGATGTGGGGCAGTC...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCGGAATGGGACAGAGATaGCAAAACCAGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRGMGQR*QNQPLG
Trigger: ACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCC...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGTGGTTTGTCAGCCACTaGAGTGTATCTATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTWFVSH*SVSIGC
Trigger: GCAGCCAATAGATACACTGCAGTGGCTGACAAACCA...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGAAGCAGAGCTTGTTCTaGTCCAGGAAGCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGKQSLF*SRKLAF
Trigger: GAATGCCAGCTTCCTGGAGCAGAACAAGCTCTGCTT...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCGGCTATTCCATCACGTaGGGGCTTTTCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPGYSIT*GLFKQE
Trigger: TTCCTGTTTGAAAAGCCCCCACGTGATGGAATAGCC...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTTTCCTTCTTCTGGCCTaGCTATTCCATCACGTGGGG +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSAFLLLA*LFHHVG
Trigger: CCCCACGTGATGGAATAGCCAGGCCAGAAGAAGGAA...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTTGGCAGTGGGCTTCTTaGGCAGGAGCGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTWQWAS*AGAWRG
Trigger: GCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCA...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCGCGACTCAAGTCAGCTaGTACAGACTTTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSATQVS*YRLCSH
Trigger: ATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGC...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGGCGACTCAAGTCAGCTaGTACAGACTTTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAATQVS*YRLCSH
Trigger: ATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGC...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCCCAGCACGGCGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGTCTTCATGGAACTGGTaGAGGTGCTCTTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: AQHGAQALTGLVDSPGKGSSWNW*RCSLGD
Trigger: GTCGCCCAAAGAGCACCTCCACCAGTTCCATGAAGA...CCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGTGGTGGTTTTCTTCATaGAACTGGTGGAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWWWFSS*NWWRCS
Trigger: AGAGCACCTCCACCAGTTCCATGAAGAAAACCACCA...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCTTGGAACCACACTTaGACTGAATATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAPWNHT*TEYGCS
Trigger: GCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGG...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
CDS-3UTR CCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCCTTGGAACCACACTTaGACTGAATATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARPWNHT*TEYGCS
Trigger: GCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGG...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
CDS-3UTR CCA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCACAATGTCGGCCCCGTaGTCGGTGCGGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VKPPQGTATSERGRTCQATMSAP*SVRALA
Trigger: TGCCAGGGCCCGCACCGACCACGGGGCCGACATTGT...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCCACTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTGAAAGGACCTGGAACAATGTCGGCCCCGTaGTCGGTGCGGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ATWATYPQPLAKGVKGPGTMSAP*SVRALA
Trigger: TGCCAGGGCCCGCACCGACCACGGGGCCGACATTGT...TCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGCCCAAGCGCTCACTaGTCTAGTGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTRPSAH*SSGQPG
Trigger: CCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCTATCAGCTGTCGCACTaGAGGGAAAGACCAAATCTG +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSYQLSH*RERPNL
Trigger: CAGATTTGGTCTTTCCCTCCAGTGCGACAGCTGATA...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGCCATATCTGATTCCATaGATGGCTGCATGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTPYLIP*MAACPW
Trigger: CCAAGGACATGCAGCCATCCATGGAATCAGATATGG...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGTGGAACATCTTTGGCTaGAGTCACATTGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAWNIFG*SHIVGQ
Trigger: CTGGCCAACAATGTGACTCCAGCCAAAGATGTTCCA...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCAGTAAGATGGAAGGCCTaGCAGAGGCGACGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSVRWKA*QRRRQG
Trigger: GCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTAC...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTGGCCACTGGCTGAAGTaGGGGCGCCAGCTTCAGGCG +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPGHWLK*GRQLQA
Trigger: CGCCTGAAGCTGGCGCCCCCACTTCAGCCAGTGGCC...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TCTGCAGTGACATGGGAGGAGGGAAGGGAGAGGGGAACAGGGGAGACAAGAGGGGGGGGCGCCCATTTGTaGGACCAGAGGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SAVTWEEGRERGTGETRGGGAHL*DQRERQ
Trigger: CTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCC...CCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGA
63% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCAGGAATTCCATCTCCTaGCCCTTTCTTGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSRNSIS*PFLVLQ
Trigger: CTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCT...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCTGCTGACAAAACACTaGCTCCCTCATGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLLLTKH*LPHVLG
Trigger: GCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAG...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGCTGCTGACAAAACACTaGCTCCCTCATGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLALLTKH*LPHVLG
Trigger: GCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAG...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGTCTATGAGTCCCAGATaGAACTCGGAGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLASMSPR*NSEVFW
Trigger: CCAGAAGACCTCCGAGTTCCATCTGGGACTCATAGA...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCCCACTGGATGAAAGCTaGGGTTCCAAACACTGGTTT +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPPLDES*GSKHWF
Trigger: AAACCAGTGTTTGGAACCCCAGCTTTCATCCAGTGG...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCGGGAGGTCTTCAATCTaGCTAGTTTCTGAGCACGGT +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRGRSSI*LVSEHG
Trigger: ACCGTGCTCAGAAACTAGCCAGATTGAAGACCTCCC...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCTCTCAATTTGTCTCCTaGATCTGGCTGTCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSSQFVS*IWLSKV
Trigger: GACCTTGGACAGCCAGATCCAGGAGACAAATTGAGA...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429422.5
CDS-3UTR TCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCCTGCTGTTGCTGAAGTaGGCCAATTCTTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRLLLLK*ANSSLF
Trigger: GAAGAGAGAAGAATTGGCTCACTTCAGCAACAGCAG...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR TCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTGCTCTGGGTTGCAGTaGCCTCAATTTCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRCSGLQ*PQFLSS
Trigger: GGAAGAAAGAAATTGAGGTCACTGCAACCCAGAGCA...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR TCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTAGCTGGCTTGGATGGTaGGGCCCGCTTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTSWLGW*GPLLRS
Trigger: GCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCT...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCGCATGGGTGTGGCCTTaGCTCGGCTGGGAACCACCC +
Preference number: 4 (lower is better)
Translates to: GSLLRGKSTLQPIPLQRSAWVWP*LGWEPP
Trigger: GGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGC...GCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCATCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCTTGAGGGCTGGGACCTaGTCCTCAGTCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGILRAGT*SSVRAT
Trigger: GGTGGCCCTGACTGAGGATCAGGTCCCAGCCCTCAA...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCAGGGTGGGGTGGCCATTaGGGCCACTGGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPGWGGH*GHWLKW
Trigger: CCACTTCAGCCAGTGGCCTCAATGGCCACCCCACCC...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GTGTCTCCTGACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCGGCCCCTTGTGTGCCTaGCCGGCTCACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: VSPDYATLFPSHFHPSRPGPLCA*PAHQPQ
Trigger: CTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCC...GGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR TCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCAGTGTGGGTGCCGGCCTaGAGGAATTCCATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSVWVPA*RNSISW
Trigger: CCAGGAGATGGAATTCCTTCAGGCCGGCACCCACAC...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCTTATCATGGTCTCTaGTGTGACAGCTTGCATTCA +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAPYHGL*CDSLHS
Trigger: TGAATGCAAGCTGTCACATCAGAGACCATGATAAGG...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGCCTCCAGCCCGTGGTTaGGAATATCTCTTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLAPPARG*EYLFCF
Trigger: AAAGCAAAAGAGATATTCTCAACCACGGGCTGGAGG...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGATATAATCCAGCAGTaGCGAGTTCCTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLDIIQQ*RVPSSQ
Trigger: CTGGGAAGAAGGAACTCGGCACTGCTGGATTATATC...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGCCTCGCTGGCAAACCTaGGAGCATGAATCAATTCTA +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLAPRWQT*EHESIL
Trigger: TAGAATTGATTCATGCTCGCAGGTTTGCCAGCGAGG...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTAATTTCTTTCTTCCCTaGCAGAGCCGTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSANFFLP*QSRLSW
Trigger: CCAGGACAGACGGCTCTGGCAGGGAAGAAAGAAATT...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCTGGAGTGCTCTGGGTTaGAGTGACCTCAATTTCTTT +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPWSALG*SDLNFF
Trigger: AAAGAAATTGAGGTCACTGCAACCCAGAGCACTCCA...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTACTTCTCAGGAGCCTTTaGATCTGCAATGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLLLRSL*ICNGLC
Trigger: ACAAAGCCCATTGCAGATGCAAAGGCTCCTGAGAAG...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTTCTCAGGAGCCTTTaGATCTGCAATGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGLLRSL*ICNGLC
Trigger: ACAAAGCCCATTGCAGATGCAAAGGCTCCTGAGAAG...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCACCTCCAGGGACATaGTTAATATTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAPPPGT*LILSLE
Trigger: TTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
CDS-3UTR GCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGCCACCTCCAGGGACATaGTTAATATTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWPPPGT*LILSLE
Trigger: TTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
CDS-3UTR GCA 90 bp TCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGGACAGGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: STRHCYLRKGEDLSGPGQAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...CTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGAGTAGGTGCAGCTGACTaGCCCACATCCTGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGVGAAD*PTSCRD
Trigger: ATCTCTGCAGGATGTGGGGCAGTCAGCTGCACCTAC...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR GCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGTTGTTTCTGTGCACTTaGAATTGGGCCGGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARLFLCT*NWAGCF
Trigger: AAAACAGCCGGCCCAATTGCAAGTGCACAGAAACAA...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCAAGGGCCCCTTGTGTaGCTGACCGGCTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: GSLLRGKSTLQPIPLQRSQGPLV*LTGSPA
Trigger: GGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTG...GCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTCCTCCCCCACCCCAAACAGCTaGGGAGTACACATCACACAG +
Preference number: 4 (lower is better)
Translates to: AAIPRPSWDALCGPCLSSPTPNS*GVHITQ
Trigger: CTGTGTGATGTGTACTCCGCAGCTGTTTGGGGTGGG...GGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR GCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTACTGAAATCACATACCTaGTCTCAAGGTGACCTGAGG +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLLKSHT*SQGDLR
Trigger: CCTCAGGTCACCTTGAGAGCAGGTATGTGATTTCAG...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp GCCCAGCACGGCGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGTTCCAAAGGAATCAATaGCTGCATGGTGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: AQHGAQALTGLVDSPGKGFQRNQ*LHGACH
Trigger: GTGGCAGGCACCATGCAGGCATTGATTCCTTTGGAA...CCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGAACGATGGAGTGCTCTaGGTTGCAGTGACCTCAATT +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLANDGVL*VAVTSI
Trigger: AATTGAGGTCACTGCAACCCAGAGCACTCCATCGTT...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGGCTATTCCATCACGTaGGGGCTTTTCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLGYSIT*GLFKQE
Trigger: TTCCTGTTTGAAAAGCCCCCACGTGATGGAATAGCC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCTTTCTTCTCTGGGCTTaGTGGGAGCTCCTTGTTCGG +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSFLLWA*WELLVR
Trigger: CCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAA...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCAGGGCAGAAGCTGGCTTaGATGGTGAGGCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPGQKLA*MVRPAS
Trigger: AGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCC...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAGTCTGGGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCTGGCAGTGGGCTTCTTaGGCAGGAGCGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KSGAASSEANLHCSQSPSWQWAS*AGAWRG
Trigger: GCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCA...GGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCGGTGGAGGTGCTCTTTaGGCGACTCAAGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLGGGAL*ATQVSW
Trigger: CCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACC...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGTTTTCTTCATGGAACTaGTGGAGGTGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGFSSWN*WRCSLG
Trigger: GCCCAAAGAGCACCTCCACCAGTTCCATGAAGAAAA...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGTGGTGGTTTTCTTCATaGAACTGGTGGAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLAWWFSS*NWWRCS
Trigger: AGAGCACCTCCACCAGTTCCATGAAGAAAACCACCA...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCCCGTGGAGCCAACCTTaGAGCGGACATTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSPWSQP*SGHSSD
Trigger: ATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGG...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 4 (lower is better)
Translates to: VKPPQGTATSERGRTCQAGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTACAATGTCGGCCCCGTaGTCGGTGCGGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GTAEVFCTWSLRRKAGPPTMSAP*SVRALA
Trigger: TGCCAGGGCCCGCACCGACCACGGGGCCGACATTGT...AGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCAGCCGCCAGGGAAGTGTaGGGGGCGGGAGACAATGTC +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPAAREV*GAGDNV
Trigger: GACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGC...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCAGTCCTCCACGGAGCAGTaGCGCAGTGATGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GAGPGICPERQPVGLNLQSSTEQ*RSDGAR
Trigger: TCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGA...CTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCGCTGTGGCGGACCAATaGGTGCTGGCCCTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSAVADQ*VLALPP
Trigger: TGGCGGCAGGGCCAGCACCCATTGGTCCGCCACAGC...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR CCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCACCAGTTCTGGCTATTTaGGTATTCCTGGTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPPVLAI*VFLVGH
Trigger: ATGGCCTACCAGGAATACCCAAATAGCCAGAACTGG...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTATATCAGCTGTCGCACTaGAGGGAAAGACCAAATCTG +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLYQLSH*RERPNL
Trigger: CAGATTTGGTCTTTCCCTCCAGTGCGACAGCTGATA...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCACGGAGCCACATCCTTaGCCGGGGCTATTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RPSAHWSSGQPGKGGQGPTEPHP*PGLFLF
Trigger: AAACAGAAATAGCCCCGGCCAAGGATGTGGCTCCGT...GGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCGTGGTGGAACATCTTTaGCTGGAGTCACATTGTTGG +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRVVEHL*LESHCW
Trigger: CCAACAATGTGACTCCAGCCAAAGATGTTCCACCAC...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGTTGCAGGTTGAGTGGTaGCCAAAGGCTTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARLQVEW*PKALFS
Trigger: AGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAA...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGGCCGACGGCAGGGCGTTTaGGTGGGGCAGCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: CRPEGIPSPGPFLFSSPGRRQGV*VGQLAL
Trigger: TAGTGCCAGCTGCCCCACCCAAACGCCCTGCCGTCG...GCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TGTGGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCGGCCACTGGCTGAAGTaGGGGCGCCAGCTTCAGGCG +
Preference number: 4 (lower is better)
Translates to: CGCRPEGIPSPGPFLFSSGHWLK*GRQLQA
Trigger: CGCCTGAAGCTGGCGCCCCCACTTCAGCCAGTGGCC...GCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCCACTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTGAAAGGACCTGGAGGGGGCGCCCATTTGTaGGACCAGAGGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ATWATYPQPLAKGVKGPGGGAHL*DQRERQ
Trigger: CTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCC...TCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCAAGGCAGCAGGTACTCTaGGCCTGTGCTGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPRQQVL*ACAVAP
Trigger: AGGGGCAACAGCACAGGCCCAGAGTACCTGCTGCCT...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGGGACCCTGGCAGGCTTaGGCCGGGTTGACCTGCGGT +
Preference number: 4 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRGPWQA*AGLTCG
Trigger: ACCGCAGGTCAACCCGGCCCAAGCCTGCCAGGGTCC...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCAAACCTGCGAGCATaGATCAATTCTAGTTTCACT +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTANLRA*INSSFT
Trigger: AGTGAAACTAGAATTGATTCATGCTCGCAGGTTTGC...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR TCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGGCAAACCTGCGAGCATaGATCAATTCTAGTTTCACT +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWANLRA*INSSFT
Trigger: AGTGAAACTAGAATTGATTCATGCTCGCAGGTTTGC...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR TCA 90 bp CTGGAACCTGTCGTCAACCTCAGCATCCTCATGACCCCAGGACAGACGCAGTGGAGCTGGCTTGGATGGTaGGGCCCGCTTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LEPVVNLSILMTPGQTQWSWLGW*GPLLRS
Trigger: GCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCT...CCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAGGTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR TCA 90 bp GGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATGGGAGGAGGGAAGGGAGGCATGGGTGTGGCCTTaGCTCGGCTGGGAACCACCC +
Preference number: 4 (lower is better)
Translates to: GTSACRSQSAVTWEEGREAWVWP*LGWEPP
Trigger: GGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGC...CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR TCA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGTTCCTCGTCGCCTCTTaGGGGCCGGCGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QRGWHKDISALFPLTLTEFLVAS*GPAQGR
Trigger: CCTCCCTTGCGCCGGCCCTCAAGAGGCGACGAGGAA...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR TCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGAATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACC +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGMHLQD*GQPFCT
Trigger: GGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCAT...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR TCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCGGAACTGCCGTTGGCTaGGGAGGTTCTGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGIGTAVG*GGSATA
Trigger: GGCTGTTGCAGAACCTCCTCAGCCAACGGCAGTTCC...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGATCTGTTTCTGGGAGTTaGGCCATGTCCTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGSVSGS*AMSLTG
Trigger: CCCAGTCAAGGACATGGCTCAACTCCCAGAAACAGA...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR TCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTTTGAGGGCTGGGACCTaGTCCTCAGTCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPLRAGT*SSVRAT
Trigger: GGTGGCCCTGACTGAGGATCAGGTCCCAGCCCTCAA...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGTGTGACGGTTTCTGGTaGAATCATGAAAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGCDGFW*NHESRC
Trigger: GCACCTACTTTCATGATTTCACCAGAAACCGTCACA...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTTTGGTCACCACCCCCTaGCAGGGTGGGGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPLVTTP*QGGVAI
Trigger: AATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAA...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCTTGGTCACCACCCCCTaGCAGGGTGGGGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: GSLLRGKSTLQPIPLQRSLVTTP*QGGVAI
Trigger: AATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAA...GCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTCCTCCCCTTTGAGGGAACTCTaGCCACTCCTGTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: AAIPRPSWDALCGPCLSSPLREL*PLLLST
Trigger: GGTAGACAACAGGAGTGGTCAGAGTTCCCTCAAAGG...GGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR GCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTACTTCCTTCAGGAATCTaGTCCAGCTTACTATGGAGA +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLLPSGI*SSLLWR
Trigger: TCTCCATAGTAAGCTGGAGCAGATTCCTGAAGGAAG...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCCTTCCTTCAGGAATCTaGTCCAGCTTACTATGGAGA +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRLPSGI*SSLLWR
Trigger: TCTCCATAGTAAGCTGGAGCAGATTCCTGAAGGAAG...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAGCTGGTACAGACTTTaGAGTCATCTTCTTGACTTC +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPSWYRL*SHLLDF
Trigger: GAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCT...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GTGAGCCCCTGCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: VSPCSFLVCAWGARDMVSAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...TGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: GSLLRGKSTLQPIPLQRSAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...GCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGTGGGGCAGGGCTGCTaGTGCCCCGGGCACGCAAAG +
Preference number: 4 (lower is better)
Translates to: WGARDMVSNLHKALLPQKVGQGC*CPGHAK
Trigger: CTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCAC...TTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCCATCATTATTTCCAATaGTTGTGCTGGTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRHHYFQ*LCWWPL
Trigger: GAGAGGCCACCAGCACAAGCATTGGAAATAATGATG...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTCCTCGGCCGGCAAGCTaGACTTTTTCCCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSPRPAS*TFSPFL
Trigger: CAGGAACGGGGAAAAAGTGCAGCTTGCCGGCCGAGG...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCAGAAGGTTGACTGTTaGATGGTTTCCTTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGQKVDC*MVSFPL
Trigger: TAGGGGAAAGGAAACCATGCAACAGTCAACCTTCTG...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCCTTCTCAGGAGCCTTTaGATCTGCAATGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSLLRSL*ICNGLW
Trigger: CCAAAGCCCATTGCAGATGCAAAGGCTCCTGAGAAG...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCCTTCTCAGGAGCCTTTaGATCTGCAATGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RPSAHWSSGQPGKGGQGPLLRSL*ICNGLW
Trigger: CCAAAGCCCATTGCAGATGCAAAGGCTCCTGAGAAG...GGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGTTGTTTCTGTGCACTTaGAATTGGGCCGGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLALFLCT*NWAGCF
Trigger: AAAACAGCCGGCCCAATTGCAAGTGCACAGAAACAA...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGACATGGCTTCAACCTaGAGAACTATTTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARDMAST*RTILPV
Trigger: AACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTC...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCAAGGGCCCCTTGTGTaGCTGACCGGCTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRQGPLV*LTGSPA
Trigger: GGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTG...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCAGTCCTAGGGTGTGGGTaGCGGCCTGAAGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSVLGCG*RPEGIP
Trigger: TGGAATTCCTTCAGGCCGGCACCCACACCCTAGGAC...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTGTCCTAGGGTGTGGGTaGCGGCCTGAAGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: AAHILQRGWHKDISALFPVLGCG*RPEGIP
Trigger: TGGAATTCCTTCAGGCCGGCACCCACACCCTAGGAC...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTCCTCCGAGGCAAATCTACACTaGAGCCAATCCCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AAIPRPSWDALCGPCLSSEANLH*SQSPSR
Trigger: TCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTC...GGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGTCCTCCGTGAGCCCCTaGAGTTTCCTGGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPSSVSP*SFLVCA
Trigger: AGCACACACCAGGAAACTGCAGGGGCTCACGGAGGA...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGAGAAAGGAAGGAACCTaGTGCTTTCTGCACAACAAA +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTRKEGT*CFLHNK
Trigger: TTTGTTGTGCAGAAAGCAGCAGGTTCCTTCCTTTCT...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGAGACTGAGAACTTATTaGAGTTTTGGGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARRLRTY*SFGGFF
Trigger: GAAGAAGCCCCCAAAACTGCAATAAGTTCTCAGTCT...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCCAGAAGTCTGAGTCATaGCTGATCCACTTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRQKSES*LIHFPK
Trigger: CTTTGGAAAGTGGATCAGGCATGACTCAGACTTCTG...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGATTCTTCTCTCTTCTTaGCCACTGGTTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLILLSS*PLVPHR
Trigger: TCTGTGAGGAACCAGTGGCCAAGAAGAGAGAAGAAT...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGTGCTCCAGCTTACTATaGAGATATAATCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: APGTQSRREGEPSGLPSTCSSLL*RYNPAV
Trigger: CACTGCTGGATTATATCTCCATAGTAAGCTGGAGCA...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGCCTTTGCATCTGCAATaGGCTTTGTTTTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GGKASLAGCPARRPSAHWPLHLQ*ALFSSL
Trigger: CAGAGAAGAAAACAAAGCCCATTGCAGATGCAAAGG...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTCCCAGATCTGGAGGCTaGGGCAGAAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSPRSGG*GRSWLG
Trigger: TCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGG...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGTGGCAGTGGGCTTCTTaGGCAGGAGCGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRWQWAS*AGAWRG
Trigger: GCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCA...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGATCTTCATGGAACTGGTaGAGGTGCTCTTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGSSWNW*RCSLGD
Trigger: GTCGCCCAAAGAGCACCTCCACCAGTTCCATGAAGA...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGACCGTGGAGCCAACCTTaGAGCGGACATTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGPWSQP*SGHSSD
Trigger: ATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGG...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCCCAGCACGGCGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGCCTTGGAACCACACTTaGACTGAATATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AQHGAQALTGLVDSPGKGPWNHT*TEYGCS
Trigger: GCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGG...CCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp GTGTCTCCTGACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCCGCCCAAGCGCTCACTaGTCTAGTGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: VSPDYATLFPSHFHPSRPRPSAH*SSGQPG
Trigger: CCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG...GGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAGGAGTATCTTCAATCTaGCTAGTTTCTGAGCACGGT +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPGVSSI*LVSEHG
Trigger: ACCGTGCTCAGAAACTAGCCAGATTGAAGATACTCC...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000395734.7
CDS-3UTR CCA 90 bp GGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTCAGAGGGAGAGGCAGTaGCTTAAGCTCCACGGTCAG +
Preference number: 4 (lower is better)
Translates to: GRCGPWHLPGTSACRSQSQRERQ*LKLHGQ
Trigger: CTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTG...AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGACCAGATCCCAGGGAATaGGACAGAGATGCCAAAACC +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGPDPRE*DRDAKT
Trigger: GGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGG...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCTGCCATTCTCTTAAATaGTTCATTCTCTACCCCAGG +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSCHSLK*FILYPR
Trigger: CCTGGGGTAGAGAATGAACCATTTAAGAGAATGGCA...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCGGGGGCTGTCCCACTaGGAGTGGTGGTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGIRGLSH*EWWFSS
Trigger: TGAAGAAAACCACCACTCTCAGTGGGACAGCCCCCG...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGCCTCCTCCAGGCTaGTGCTTGATGTTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTRPPPG*CLMFSV
Trigger: CACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCG...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp TTCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCCGGCCTCCTCCAGGCTaGTGCTTGATGTTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: FPGFLLTAAIPRPSWDALRPPPG*CLMFSV
Trigger: CACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCG...GAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGTTGTCCTGCAAATATTaGAGTATCAGCTGTCGCACT +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLALSCKY*SISCRT
Trigger: AGTGCGACAGCTGATACTTCAATATTTGCAGGACAA...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp GCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTCCTCCGAAGTCTTTGCAGGTTaGGTGGTGGCCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: AAIPRPSWDALCGPCLSSEVFAG*VVAKGF
Trigger: AAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTC...GGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGACCTTCCTTTACTACTTaGGGAGTAGGAGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGPSFTT*GVGVGS
Trigger: ACTGCCCACTCCTACTCCTCAAGTAGTAAAGGAAGG...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GCCCAGCACGGCGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGAGTAAGTCAGGAATCTaGACTGCAACAGACCCTTCT +
Preference number: 4 (lower is better)
Translates to: AQHGAQALTGLVDSPGKGSKSGI*TATDPS
Trigger: AGAAGGGTCTGTTGCAGTTCAGATTCCTGACTTACT...CCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp CAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGTGTGGGTGCCGGCCTaGAGGAATTCCATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QTSTRHCYLRKGEDLSGPVWVPA*RNSISW
Trigger: CCAGGAGATGGAATTCCTTCAGGCCGGCACCCACAC...TGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGAATGTAATTTCCCGTaGACTAGCACTCTGTTTAGA +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARECNFP*TSTLFR
Trigger: TCTAAACAGAGTGCTAGTTCACGGGAAATTACATTC...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCCTCTCCTCAAGCAGTTaGGTATTAAATGCACTTACA +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSLSSSS*VLNALT
Trigger: TGTAAGTGCATTTAATACTCAACTGCTTGAGGAGAG...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAAAGGCTTGGGCCGGGTTaGCCTGCGGTCACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLERLGPG*PAVTGS
Trigger: AGACCCAGTGACCGCAGGTCAACCCGGCCCAAGCCT...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCTGGCTCACTCGGTATaGGAACAGCCCTTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGILAHSV*EQPFRP
Trigger: AGGACGGAAGGGCTGTTCTCATACCGAGTGAGCCAG...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAAGGAGCCTTTGCATCTaGAATGGGCTTTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLRSLCI*NGLCFL
Trigger: AAGAAAACAAAGCCCATTGCAGATGCAAAGGCTCCT...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCATCTTCTTGACTTCTaGAGGTTTTCCCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLHLLDF*RFSLSL
Trigger: AAGACTGAGGGAAAACCTGCAGAAGTCAAGAAGATG...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCAGCTGGTACAGACTTTaGAGTCATCTTCTTGACTTC +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRSWYRL*SHLLDF
Trigger: GAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCT...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAAGCTGGTACAGACTTTaGAGTCATCTTCTTGACTTC +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLSWYRL*SHLLDF
Trigger: GAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCT...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCATATCTTTAGCCAATaGCACCTCGGTTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLHIFSQ*HLGFCS
Trigger: GCTACAAAAACCGAGGTGGCATTGGCTAAAGATATG...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACGCAGGTTGTTTCTGTaGACTTGCAATTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSRRLFL*TCNWAG
Trigger: GCCGGCCCAATTGCAAGTGCACAGAAACAACCTGCG...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACATCCAGGGCCCTAAGCTaGCCACATCCTCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTSRALS*PHPPAG
Trigger: CCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGA...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGAGGAATGGGACAGAGATaGCAAAACCAGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGGMGQR*QNQPLG
Trigger: ACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCC...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCATACCTTCTCCAGGGATaGCAGGACCAGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSYLLQG*QDQRRA
Trigger: TGCCCTTCTCTGGTCCTGGCATCCCTGGAGAAGGTA...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGTCTGATGTGACAGCTTaGATTCAAATGTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLSDVTA*IQMFLG
Trigger: ACCCAGGAACATTTGAATGCAAGCTGTCACATCAGA...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCTCATCATTATTGGTGTaGTTTCTATATCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSSSLLV*FLYPRP
Trigger: AGGCCTGGGATATAGAAAGCACACCAATAATGATGA...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTTGCCTGCATGGTGCCTaGCACCTTAGGCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: AAHILQRGWHKDISALFPCLHGA*HLRLSH
Trigger: ATGACTCAGCCTAAGGTGGCAGGCACCATGCAGGCA...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGCCTTTGCATCTGCAATaGGCTTTGTTTTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLAPLHLQ*ALFSSL
Trigger: CAGAGAAGAAAACAAAGCCCATTGCAGATGCAAAGG...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCAGGGCAGAAGCTGGCTTaGATGGTGAGGCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPGQKLA*MVRPAS
Trigger: AGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCC...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCGGGCAGAAGCTGGCTTaGATGGTGAGGCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: VKPPQGTATSERGRTCQAGQKLA*MVRPAS
Trigger: AGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCC...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCCACTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTGAAAGGACCTGGACCCAGATCTGGAGGCTaGGGCAGAAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: ATWATYPQPLAKGVKGPGPRSGG*GRSWLG
Trigger: TCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGG...TCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp TTCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCGGTGGAGGTGCTCTTTaGGCGACTCAAGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FPGFLLTAAIPRPSWDALGGGAL*ATQVSW
Trigger: CCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACC...GAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACCTCCTGCAGGTAGGTaGCCCACATTATCGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPPPAGR*PTLSRD
Trigger: ATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGG...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGTCCTCCACGGAGCAGTaGCGCAGTGATGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GQPPQRQIYTAANPPPEKSSTEQ*RSDGAR
Trigger: TCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGA...CTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTGGAGTATCTTCAATCTaGCTAGTTTCTGAGCACGGT +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSAGVSSI*LVSEHG
Trigger: ACCGTGCTCAGAAACTAGCCAGATTGAAGATACTCC...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000395734.7
CDS-3UTR CCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGGTTGGAAACAAAAGTTaGTATCTTCTGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAVGNKS*YLLASS
Trigger: AGAACTGGCCAGAAGATACCAACTTTTGTTTCCAAC...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGTTGGAAACAAAAGTTaGTATCTTCTGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PRARKAGGKASLAGCPARVGNKS*YLLASS
Trigger: AGAACTGGCCAGAAGATACCAACTTTTGTTTCCAAC...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTGGTCAAGATCACGTTaGTTTCCGGGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLWSRSR*FPGAVS
Trigger: TGACACTGCCCCCGGAAACCAACGTGATCTTGACCA...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGATTCTGTTTTGAGGGCTaGGACCTGATCCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGFCFEG*DLILSQ
Trigger: CTGACTGAGGATCAGGTCCCAGCCCTCAAAACAGAA...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGCGACGGCAGGGCGTTTaGGTGGGGCAGCTGGCACTA +
Preference number: 4 (lower is better)
Translates to: QRGWHKDISALFPLTLTERRQGV*VGQLAL
Trigger: TAGTGCCAGCTGCCCCACCCAAACGCCCTGCCGTCG...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCGTAAGATGGAAGGCCTaGCAGAGGCGACGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSVRWKA*QRRRQG
Trigger: GCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTAC...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp ACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCTTTCTTCCTGGGCCACTGGCTGAAGTaGGGGCGCCAGCTTCAGGCG +
Preference number: 4 (lower is better)
Translates to: TTQPCFLPTFIPAGPFFLGHWLK*GRQLQA
Trigger: CGCCTGAAGCTGGCGCCCCCACTTCAGCCAGTGGCC...CAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429422.5
CDS-3UTR CCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCCATGTCAGTTTCTTTTaGGTTTGGACCAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPHVSFF*VWTKEP
Trigger: TGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATG...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCAGAGGGAGAGGCAGTaGCTTAAGCTCCACGGTCAG +
Preference number: 4 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGIQRERQ*LKLHGQ
Trigger: CTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTG...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCATCCTCCAGCGGGGGTaGCATAAGGATATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLILQRG*HKDISA
Trigger: GGCGGAGATATCCTTATGCCACCCCCGCTGGAGGAT...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGGCTCTGGTCTTCTACTaGCACTCCAGGAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPALVFY*HSRKEV
Trigger: CACCTCCTTCCTGGAGTGCCAGTAGAAGACCAGAGC...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCACCAAAATCTTATCTTTaGGTTCTGGGAGTCGAACAC +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPPKSYL*VLGVEH
Trigger: GTGTTCGACTCCCAGAACCCAAAGATAAGATTTTGG...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTAGACTTTGGCAAAAGTaGAGTAAGTCCTCGGGACTT +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSARLWQK*SKSSGL
Trigger: AAGTCCCGAGGACTTACTCCACTTTTGCCAAAGTCT...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCATTCCTGGTGTGTGCTTaGGGAGCTAGGGACATGGTG +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSFLVCA*GARDMV
Trigger: CACCATGTCCCTAGCTCCCCAAGCACACACCAGGAA...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTTTCCTGGTGTGTGCTTaGGGAGCTAGGGACATGGTG +
Preference number: 4 (lower is better)
Translates to: AAHILQRGWHKDISALFPFLVCA*GARDMV
Trigger: CACCATGTCCCTAGCTCCCCAAGCACACACCAGGAA...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGCCCCTGCAGTTTCCTaGTGTGTGCTTGGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSAPAVS*CVLGEL
Trigger: TAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGC...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTCCTCCGCTCCCTCATGTTCTTaGCACAGCAGAAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: AAIPRPSWDALCGPCLSSAPSCS*HSRSVL
Trigger: CAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGC...GGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCATGGGCTTCTTGTCTATaGAAGGAGTTGTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPWASCL*KELWRA
Trigger: GGCCCTCCACAACTCCTTTCATAGACAAGAAGCCCA...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAATTGGTCACCACCCCCTaGCAGGGTGGGGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLELVTTP*QGGVAI
Trigger: AATGGCCACCCCACCCTGTCAGGGGGTGGTGACCAA...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCAGGCTCCCTTGGACATaGGGGCTTACATGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGIRLPWT*GLTCPR
Trigger: CCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCT...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGTTAAATTTCCAGACCTaGTTTCCTACTATCTGCATG +
Preference number: 4 (lower is better)
Translates to: PGTQSRREGEPSGLPSTALNFQT*FPTICM
Trigger: CATGCAGATAGTAGGAAATCAGGTCTGGAAATTTAA...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCGGTCAGGAGGGGGCATaGGGAGGCCAAGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPGQEGA*GGQVWG
Trigger: GCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACC...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCTTTGAGGGAACTCTaGCCACTCCTGTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSPLREL*PLLLST
Trigger: GGTAGACAACAGGAGTGGTCAGAGTTCCCTCAAAGG...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR TCA 90 bp TCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGGACAGGAGTGGAGGATCCTTTaGGGGAACTCTGACCACTCC +
Preference number: 4 (lower is better)
Translates to: STRHCYLRKGEDLSGPGQEWRIL*GNSDHS
Trigger: GGAGTGGTCAGAGTTCCCTCAAAGGATCCTCCACTC...CTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR TCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTGGCTGTCTGCTTGTCTaGGAGCGACATCGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPGCLLV*ERHRLS
Trigger: GGAGAGACGATGTCGCTCTCAGACAAGCAGACAGCC...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTCTGGGCAGCCAGGGGTaGTGCTATTCTCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPLGSQG*CYSPSL
Trigger: GAGAGATGGAGAATAGCATCACCCCTGGCTGCCCAG...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp CAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCGGGGTCCTTTCAGATTaGGAGGGCCTACTGACTGGC +
Preference number: 4 (lower is better)
Translates to: QQKCSAHGLYGGKLVPLAGVLSD*EGLLTG
Trigger: GCCAGTCAGTAGGCCCTCTCAATCTGAAAGGACCCC...GGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTAAAATCTTCCTaGCCTTTTTCCTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRSLKSS*PFSLLL
Trigger: AAGCAGCAAGGAAAAAGGGCAGGAAGATTTTAGTGA...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR GCA 90 bp GCCACTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTGAAAGGACCTGGATGGAGGGGCTCCTACTaGTTGGGCCAGTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: ATWATYPQPLAKGVKGPGWRGSY*LGQLRQ
Trigger: TTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCA...TCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR GCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCATCTTCTTGACTTCTaGAGGTTTTCCCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSAHLLDF*RFSLSL
Trigger: AAGACTGAGGGAAAACCTGCAGAAGTCAAGAAGATG...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTAGCTGGTACAGACTTTaGAGTCATCTTCTTGACTTC +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSASWYRL*SHLLDF
Trigger: GAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCT...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCATGTTTCTTTAGATGGTaGCATGTCAGTAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPCFFRW*HVSSLQ
Trigger: CTGAAGACTACTGACATGGCACCATCTAAAGAAACA...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp TCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGGACAGCGCAGGTTGTTTCTGTaGACTTGCAATTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: STRHCYLRKGEDLSGPGQRRLFL*TCNWAG
Trigger: GCCGGCCCAATTGCAAGTGCACAGAAACAACCTGCG...CTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTGAGGCAAATCTACACTaGAGCCAATCCCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AAHILQRGWHKDISALFPEANLH*SQSPSR
Trigger: TCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTC...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAGAACCTGCTGCTTTCTaGACAACAAAATGCTACTTT +
Preference number: 4 (lower is better)
Translates to: ARKAGGKASLAGCPARRPEPAAF*TTKCYF
Trigger: AAAGTAGCATTTTGTTGTGCAGAAAGCAGCAGGTTC...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCCCCCATCACCACTaGCTCCGTGAGATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPLPHHH*LREISL
Trigger: AAGGCTGATCTCACGGAGGCAGTGGTGATGGGGGAG...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAAGTGTATCTATTGGCTaGATCTGTCTTATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GAGLLLPRARKAGGKASLSVSIG*ICLILL
Trigger: GAGGAGAATAAGACAGATGCAGCCAATAGATACACT...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTCAGAGCCGTCTGTCCTaGCTGTTTCTCTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPQSRLS*LFLSSL
Trigger: CAGCGAGGAGAGAAACAGCCAGGACAGACGGCTCTG...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCATTTCTTCTCTGGGCTTaGTGGGAGCTCCTTGTTCGG +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPFLLWA*WELLVR
Trigger: CCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAA...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTTCTTGGACCCAGATCTaGAGGCTGGGGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPSWTQI*RLGQKL
Trigger: CAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGA...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCAGTCTGAGTGCTCTTaGACCCAGATCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTQSECS*TQIWRL
Trigger: CAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTG...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGAGCGACTCAAGTCAGCTaGTACAGACTTTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGATQVS*YRLCSH
Trigger: ATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGC...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTCCTCCTGGTGGTTTTCTTCATaGAACTGGTGGAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: AAIPRPSWDALCGPCLSSWWFSS*NWWRCS
Trigger: AGAGCACCTCCACCAGTTCCATGAAGAAAACCACCA...GGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCCTCCTGCAGGTAGGTaGCCCACATTATCGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLPPAGR*PTLSRD
Trigger: ATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGG...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCTTAAAGGGATCAGTCTaGATAGGATCGACCACTTGC +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSLKGSV*IGSTTC
Trigger: GCAAGTGGTCGATCCTATCCAGACTGATCCCTTTAA...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCTACCAAATCCTTGGCTaGGACTATCTTGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPYQILG*DYLVFF
Trigger: AAAGAAAACAAGATAGTCCCAGCCAAGGATTTGGTA...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCAGAATGGTGGTGGGAGCTaGCTGCTTAGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GAGPGICPERQPVGLNLQNGGGS*LLRERS
Trigger: ACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATT...CTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTCAGAGGGAGAGGCAGTaGCTTAAGCTCCACGGTCAG +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPQRERQ*LKLHGQ
Trigger: CTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTG...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACCAGATCCCAGGGAATaGGACAGAGATGCCAAAACC +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPPDPRE*DRDAKT
Trigger: GGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGG...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCTGGATTGTAGACTTTaGCAAAAGTGGAGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSALDCRL*QKWSKS
Trigger: GGACTTACTCCACTTTTGCCAAAGTCTACAATCCAG...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTAGGCCTTCCTTCTTCTaGCCTGGCTATTCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTRPSFF*PGYSSG
Trigger: TCCGCTGGAATAGCCAGGCCAGAAGAAGGAAGGCCT...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCGGGGAGCTAGGGACATaGTGTCAAACCTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGIGELGT*CQTSTR
Trigger: CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCC...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCTGTAGGACTAGGCATTaGGCTACTAGGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLCRTRH*ATRGRQ
Trigger: CTGCCTCCCCCTAGTAGCCCAATGCCTAGTCCTACA...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGACAACTGCTTCCACTGTaGGTGTATCTGGTGTATGTG +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGQLLPL*VYLVYV
Trigger: CACATACACCAGATACACCCACAGTGGAAGCAGTTG...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCCCTGGATTTGCTCTTaGCAGCTCACATCTGTCACC +
Preference number: 4 (lower is better)
Translates to: AAHILQRGWHKDISALFPPWICS*QLTSVT
Trigger: GGTGACAGATGTGAGCTGCCAAGAGCAAATCCAGGG...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCAACAAATCCTGCCCCCTaGATTTGCTCTTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPTNPAP*ICSWQL
Trigger: GAGCTGCCAAGAGCAAATCCAGGGGGCAGGATTTGT...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTTGGGCTTCTTGTCTATaGAAGGAGTTGTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTWASCL*KELWRA
Trigger: GGCCCTCCACAACTCCTTTCATAGACAAGAAGCCCA...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCTCCCTTCTACTCCATaGCCACCATTGGCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLLPSTP*PPLARS
Trigger: ACTCCTAGCCAATGGTGGTCATGGAGTAGAAGGGAG...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGGGAACTGCCGTTGGCTaGGGAGGTTCTGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: QRGWHKDISALFPLTLTEGTAVG*GGSATA
Trigger: GGCTGTTGCAGAACCTCCTCAGCCAACGGCAGTTCC...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp TCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAGGAACTGCCGTTGGCTaGGGAGGTTCTGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: SSEANLHCSQSPSREALGGTAVG*GGSATA
Trigger: GGCTGTTGCAGAACCTCCTCAGCCAACGGCAGTTCC...TCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp TCTGCAGTGACATGGGAGGAGGGAAGGGAGAGGGGAACAGGGGAGACAAGAGGGTCTGTTTCTGGGAGTTaGGCCATGTCCTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: SAVTWEEGRERGTGETRGSVSGS*AMSLTG
Trigger: CCCAGTCAAGGACATGGCTCAACTCCCAGAAACAGA...CCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR TCA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTGAAGTCTTTGCAGGTTaGGTGGTGGCCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: AAHILQRGWHKDISALFPEVFAG*VVAKGF
Trigger: AAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTC...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCCGTATCCGCCACCTCTaGAGGAGGAGCTTCGACTTT +
Preference number: 4 (lower is better)
Translates to: QQKCSAHGLYGGKLVPLARIRHL*RRSFDF
Trigger: AAAGTCGAAGCTCCTCCTTCAGAGGTGGCGGATACG...GGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCAGGCTCCCTTGGACATaGGGGCTTACATGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: GSLLRGKSTLQPIPLQRSRLPWT*GLTCPR
Trigger: CCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCT...GCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GTGTCTCCTGACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCACCTCAGCATCCTCATaGCCCCAGGACAGACGCAGT +
Preference number: 4 (lower is better)
Translates to: VSPDYATLFPSHFHPSRPTSASS*PQDRRS
Trigger: ACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGT...GGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR GCA 90 bp TCTGCAGTGACATGGGAGGAGGGAAGGGAGAGGGGAACAGGGGAGACAAGAGGGTGGAACTGGTGGAGGTaGTCTTTGGGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: SAVTWEEGRERGTGETRGWNWWR*SLGDSS
Trigger: ACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCA...CCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR GCA 90 bp CTCCAGAGAAGCCCTTGGAATCTCCCAGGCCATTTCACTACAAACTTATGTTTGCGGCCCCGTGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 4 (lower is better)
Translates to: LQRSPWNLPGHFTTNLCLRPRGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCACGGGGCCG...CAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCGTGGAGTCACATCCTTaGCCAGAGCCATTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLVESHP*PEPFLF
Trigger: AAACAGAAATGGCTCTGGGCAAGGATGTGACTCCAC...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTATCCTTAGCCAGGGGTaGTTCTGTTTTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTILSQG*FCFEGW
Trigger: CCAGCCCTCAAAACAGAAGCACCCCTGGCTAAGGAT...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTGTAGGTGCAGCTGACTaGCCCACATCCTGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPVGAAD*PTSCRD
Trigger: ATCTCTGCAGGATGTGGGGCAGTCAGCTGCACCTAC...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAGTGGTGGGAGCTGGCTaGTTAGGGAGAGAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTVVGAG*LGREVG
Trigger: GCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCAC...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAAGTGGTGGGAGCTGGCTaGTTAGGGAGAGAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEVVGAG*LGREVG
Trigger: GCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCAC...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTTCTCAGGAGCCTTTaGATCTGCAATGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPLLRSL*ICNGLW
Trigger: CCAAAGCCCATTGCAGATGCAAAGGCTCCTGAGAAG...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGGCACCTCCACAAGGCACTaGTACCTCAGAAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: CRPEGIPSPGPFLFSSPGTSTRH*YLRKGE
Trigger: CTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGT...GCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCCACTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTGAAAGGACCTGGAACCTCCACAAGGCACTaGTACCTCAGAAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ATWATYPQPLAKGVKGPGTSTRH*YLRKGE
Trigger: CTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGT...TCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR GCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCAACCCTTCCTGTCAACTaGTTCCACTGTGGGTGTATC +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPTLPVN*FHCGCI
Trigger: GATACACCCACAGTGGAAGCAGTTGACAGGAAGGGT...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp TCTGCAGTGACATGGGAGGAGGGAAGGGAGAGGGGAACAGGGGAGACAAGAGGGGAGCTCCTTGTTCGGTaGGGTGGTGATGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SAVTWEEGRERGTGETRGELLVR*GGDVIS
Trigger: GGAAATGACATCACCACCCCACCGAACAAGGAGCTC...CCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTTTTCTTCTCTGGGCTTaGTGGGAGCTCCTTGTTCGG +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTFLLWA*WELLVR
Trigger: CCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAA...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGTCTTGGACCCAGATCTaGAGGCTGGGGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRSWTQI*RLGQKL
Trigger: CAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGA...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTGATCCCACCTTGGCCTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATC...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCCTGTGCTGTTGCCCCTGAGGTGTCTCCTGACTACGCAACCCTGTTTCCTTCCGATCCCACCTTGGCCTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ACAVAPEVSPDYATLFPSDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATC...GGAAGGAAACAGGGTTGCGTAGTCAGGAGACACCTCAGGGGCAACAGCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCAGATCCCACCTTGGCCTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATC...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTGATCCCACCTTGGCCTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATC...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AGAGCACGCCACTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTGAAAGGGATCCCACCTTGGCCTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RARHLGHLPPTFGQRSERDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAGGCCAAGGTGGGATC...CCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp CAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCCCTCCTGCAGGTAGGTaGCCCACATTATCGAGGGAT +
Preference number: 4 (lower is better)
Translates to: QQKCSAHGLYGGKLVPLAPPAGR*PTLSRD
Trigger: ATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGG...GGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAATCCTCCACGGAGCAGTaGCGCAGTGATGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLESSTEQ*RSDGAR
Trigger: TCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGA...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TTCTTCCTGCTGACAAAACACTGGCTCCCTCATGTTCTTGGCACAGCAGAAGTGCCGCCGAGACGGAGCTaGGGCAGAAGGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FFLLTKHWLPHVLGTAEVPPRRS*GRREPG
Trigger: TCCTGGCTCCCTTCTGCCCCAGCTCCGTCTCGGCGG...CACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCCCAGTTCTGGCTATTTaGGTATTCCTGGTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLPVLAI*VFLVGH
Trigger: ATGGCCTACCAGGAATACCCAAATAGCCAGAACTGG...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTACCACTTGCTCAGGTTaGAAACAAAAGTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSATTCSG*KQKLVS
Trigger: AGATACCAACTTTTGTTTCCAACCTGAGCAAGTGGT...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCTAGTGCCATGTCCTTaGCGAGGGCCATCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTLVPCP*RGPSLF
Trigger: AAACAGAGATGGCCCTCGCCAAGGACATGGCACTAG...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTGCAGTACCACATTCTTaGCTGAAGATACATCTGTTT +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSAAVPHS*LKIHLF
Trigger: AAACAGATGTATCTTCAGCCAAGAATGTGGTACTGC...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTTTCTGTTTCTGGAGGTaGAGTCACATCCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GRCGPWHLPGTSACRSQSFCFWR*SHILAQ
Trigger: CTGGGCAAGGATGTGACTCCACCTCCAGAAACAGAA...AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCATTCTGTTTCTGGAGGTaGAGTCACATCCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSFCFWR*SHILAQ
Trigger: CTGGGCAAGGATGTGACTCCACCTCCAGAAACAGAA...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCAACTACTTCTGTTTCTaGAGGTGGAGTCACATCCTT +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSNYFCF*RWSHIL
Trigger: AAGGATGTGACTCCACCTCCAGAAACAGAAGTAGTT...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTGGCCACCTCCATTTCTaGAGGCAGACATACGTTCTT +
Preference number: 4 (lower is better)
Translates to: AAHILQRGWHKDISALFPGHLHF*RQTYVL
Trigger: AAGAACGTATGTCTGCCTCCAGAAATGGAGGTGGCC...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTGCAGAGATTCTAAATaGGAATCCTCACTTATTCCT +
Preference number: 4 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRCRDSK*ESSLIP
Trigger: AGGAATAAGTGAGGATTCCCATTTAGAATCTCTGCA...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCATGTCAGTTTCTTTTaGGTTTGGACCAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSAHVSFF*VWTKEP
Trigger: TGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATG...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGATCCTCCAGCGGGGGTaGCATAAGGATATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRILQRG*HKDISA
Trigger: GGCGGAGATATCCTTATGCCACCCCCGCTGGAGGAT...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGACTGGATTTCTGGTGTTaGCAAGGAAACGCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGLDFWC*QGNAFQ
Trigger: TTGGAAAGCGTTTCCTTGCCAACACCAGAAATCCAG...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCAAGGCCTTCCTTCTTCTaGCCTGGCTATTCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPRPSFF*PGYSSG
Trigger: TCCGCTGGAATAGCCAGGCCAGAAGAAGGAAGGCCT...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GTGAGCCCCTGCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAGGGGAGCTAGGGACATaGTGTCAAACCTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: VSPCSFLVCAWGARDMVSGELGT*CQTSTR
Trigger: CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCC...TGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCTTCCTGGTGTGTGCTTaGGGAGCTAGGGACATGGTG +
Preference number: 4 (lower is better)
Translates to: GSLLRGKSTLQPIPLQRSFLVCA*GARDMV
Trigger: CACCATGTCCCTAGCTCCCCAAGCACACACCAGGAA...GCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAAAGGCAGCAGGTACTCTaGGCCTGTGCTGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLERQQVL*ACAVAP
Trigger: AGGGGCAACAGCACAGGCCCAGAGTACCTGCTGCCT...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp GTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCCAGGACAGACGCAGTaGAGGCAGCAGGTACTCTGG +
Preference number: 4 (lower is better)
Translates to: VSWCVLGELGTWCQTSTRPGQTQ*RQQVLW
Trigger: CCAGAGTACCTGCTGCCTCCACTGCGTCTGTCCTGG...CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTATAATGGGGGCTGGGTaGGCTAGAGACACCAGGAGT +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPIMGAG*ARDTRS
Trigger: ACTCCTGGTGTCTCTAGCCCACCCAGCCCCCATTAT...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420772.6
3UTR CAA 72 bp AGAGAGCACGCCACTTGGGCCACCTACCCCCAACCTTaGGCCAAAGGAGTGAAAGGACCTGGAACCTGTCGT +
Preference number: 4 (lower is better)
Translates to: REHATWATYPQP*AKGVKGPGTCR
Trigger: ACGACAGGTTCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR TCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTTGGGCTTCTTGTCTATaGAAGGAGTTGTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPWASCL*KELWRA
Trigger: GGCCCTCCACAACTCCTTTCATAGACAAGAAGCCCA...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACC +
Preference number: 4 (lower is better)
Translates to: GCRPEGIPSPGPFLFSSPMHLQD*GQPFCT
Trigger: GGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCAT...AGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp GGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCTCCCTTCTACTCCATaGCCACCATTGGCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: GQPPQRQIYTAANPPPEKLPSTP*PPLARS
Trigger: ACTCCTAGCCAATGGTGGTCATGGAGTAGAAGGGAG...CTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTGGATATTTCTGTGGATaGTATAATGTCATTAGCCTG +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSAGYFCG*YNVISL
Trigger: CAGGCTAATGACATTATATCATCCACAGAAATATCC...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAGAAAGTAGGTGCAGCTaGCTGCCCCACATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTESRCS*LPHILQ
Trigger: CTGCAGGATGTGGGGCAGTCAGCTGCACCTACTTTC...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTGTGACGGTTTCTGGTaGAATCATGAAAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLCDGFW*NHESRC
Trigger: GCACCTACTTTCATGATTTCACCAGAAACCGTCACA...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTCGCACCACTGTGCACTaGCTCAGATTCTCCTATCAC +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPRTTVH*LRFSYH
Trigger: GTGATAGGAGAATCTGAGTCAGTGCACAGTGGTGCG...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGACCTCAGCATCCTCATaGCCCCAGGACAGACGCAGT +
Preference number: 4 (lower is better)
Translates to: QRGWHKDISALFPLTLTETSASS*PQDRRS
Trigger: ACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGT...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR TCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCAGGGATGGCAGGTCTCTaGAATCACATACCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPGMAGL*NHIPAL
Trigger: GAGAGCAGGTATGTGATTTCAGAGACCTGCCATCCC...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTACTTATCTGCAAGGTTaGCAGCTGGGGGAACTGAGA +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTTYLQG*QLGELR
Trigger: TCTCAGTTCCCCCAGCTGTCAACCTTGCAGATAAGT...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp GGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTAGTGCCTGGTTGCTTTaGAGAATTCAGCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GCRPEGIPSPGPFLFSSPSAWLL*RIQPQL
Trigger: GAGCTGGGGCTGAATTCTTCAAAGCAACCAGGCACT...AGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCAGCTAACACCAGAAGTCTaGGTCATGCCTGATCCACTT +
Preference number: 4 (lower is better)
Translates to: GAGPGICPERQPVGLNLQLTPEV*VMPDPL
Trigger: AAGTGGATCAGGCATGACTCAGACTTCTGGTGTTAG...CTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCTCCTCAGATACTACTaGAGGAACAAATCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLLLRYY*RNKSCP
Trigger: GGGGCAGGATTTGTTCCTTCAGTAGTATCTGAGGAG...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTTTGCAACAGTCTGAGTaGTCTTGGACCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTLQQSE*SWTQIW
Trigger: CCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAA...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTTTGCAACAGTCTGAGTaGTCTTGGACCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSLQQSE*SWTQIW
Trigger: CCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAA...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACATGGAGGGGCTCCTACTaGTTGGGCCAGTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTWRGSY*LGQLRQ
Trigger: TTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCA...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGGCTGGAACTGGTGGAGGTaGTCTTTGGGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: CRPEGIPSPGPFLFSSPGWNWWR*SLGDSS
Trigger: ACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCA...GCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCCTCCACCAGGCTTGTaGTTGATGTTAGCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTPPPGL*LMLALD
Trigger: GTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGG...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCTGTTTCTTTAGATGGTaGCATGTCAGTAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSCFFRW*HVSSLQ
Trigger: CTGAAGACTACTGACATGGCACCATCTAAAGAAACA...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp TGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGGCGATTCCATGGATGGCTaGATGTCCTTGGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: CRPEGIPSPGPFLFSSPGDSMDG*MSLASV
Trigger: GACACTGGCCAAGGACATGCAGCCATCCATGGAATC...GCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGACTGCCCCACATCCTaGAGAGATTCTAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: GRCGPWHLPGTSACRSQSDCPTS*RDSKWE
Trigger: TTCCCATTTAGAATCTCTGCAGGATGTGGGGCAGTC...AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR GCA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCGAGGCAAATCTACACTaGAGCCAATCCCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VKPPQGTATSERGRTCQAEANLH*SQSPSR
Trigger: TCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTC...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTGTGAGAGAGGCTGTCTaGTTGTCTGAGAGCGACATC +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPVREAV*LSESDI
Trigger: GATGTCGCTCTCAGACAAGCAGACAGCCTCTCTCAC...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGTTTGTATTCATGTTaGTTCAGCAATTTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: AGLLLPRARKAGGKASLAGLYSC*FSNFLS
Trigger: AGACAAGAAATTGCTGAAGCAACATGAATACAAACC...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCAGAGCTCCTTGTTCGGTaGGGTGGTGATGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPELLVR*GGDVIS
Trigger: GGAAATGACATCACCACCCCACCGAACAAGGAGCTC...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGAGCTCCTTGTTCGGTaGGGTGGTGATGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: QTSTRHCYLRKGEDLSGPELLVR*GGDVIS
Trigger: GGAAATGACATCACCACCCCACCGAACAAGGAGCTC...TGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCATTTCTTCTCTGGGCTTaGTGGGAGCTCCTTGTTCGG +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPFLLWA*WELLVR
Trigger: CCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAA...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCGACTCAAGTCAGCTaGTACAGACTTTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: GRCGPWHLPGTSACRSQSATQVS*YRLCSH
Trigger: ATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGC...AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp GTGAGCCCCTGCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCACCGTGGAGCCAACCTTaGAGCGGACATTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: VSPCSFLVCAWGARDMVSPWSQP*SGHSSD
Trigger: ATCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGG...TGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACCTTGGAACCACACTTaGACTGAATATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPPWNHT*TEYGCS
Trigger: GCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGG...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
CDS-3UTR CCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCATCTTCTGGCCAGTTCTaGCTATTTGGGTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSSSGQF*LFGYSW
Trigger: CCAGGAATACCCAAATAGCCAGAACTGGCCAGAAGA...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCCTCTGTTTCTTTAGATaGTGCCATGTCAGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSLCFFR*CHVSSL
Trigger: AAGACTACTGACATGGCACCATCTAAAGAAACAGAG...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCCACTTCTTTTACTGTaGACGGAGCCACATCCTTGG +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTPLLLL*TEPHPW
Trigger: CCAAGGATGTGGCTCCGTCCACAGTAAAAGAAGTGG...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCCAGATCCCAGGGAATaGGACAGAGATGCCAAAACC +
Preference number: 4 (lower is better)
Translates to: VKPPQGTATSERGRTCQAPDPRE*DRDAKT
Trigger: GGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGG...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAGTCTGGGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCGTCCTCGGGACTTGGTaGGTCTCATGTAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KSGAASSEANLHCSQSPSVLGTW*VSCSLS
Trigger: TGAAAGGCTACATGAGACCCACCAAGTCCCGAGGAC...GGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTAGGAATTCCATCTCCTaGCCCTTTCTTGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRCGPWHLPGTSACRSQSRNSIS*PFLVLQ
Trigger: CTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCT...AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp TGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGGCCTCCAGAGAAGCCCTTaGAATCTCCCAGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: CRPEGIPSPGPFLFSSPGLQRSP*NLPGHF
Trigger: GAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG...GCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCCTCCAGAGAAGCCCTTaGAATCTCCCAGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: QQKCSAHGLYGGKLVPLALQRSP*NLPGHF
Trigger: GAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG...GGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTAGGAGTGAAAGGACCTaGAACCTGTCGTCAACCTCA +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSRSERT*NLSSTS
Trigger: TGAGGTTGACGACAGGTTCCAGGTCCTTTCACTCCT...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTACTGCCTTTTTCTGCTaGGGGGCTTGGTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPTAFFC*GAWLST
Trigger: TGTGCTCAACCAAGCCCCCCAGCAGAAAAAGGCAGT...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTTGTTGGTTTAGAAGATaGAGTATCAAGAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: KAGGKASLAGCPARRPSACWFRR*SIKRKM
Trigger: CATCTTCCTCTTGATACTCCATCTTCTAAACCAACA...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp TCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGGACAGGTCTGCAAACTTGTTTaGCTTGTGTGGGAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: STRHCYLRKGEDLSGPGQVCKLV*LVWEGY
Trigger: GTACCCCTCCCACACAAGCCAAACAAGTTTGCAGAC...CTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCCTTCCCTTCAAAAGGTaGGTTAAGGATTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSLPFKR*VKDFFL
Trigger: AAGGAAGAAATCCTTAACCCACCTTTTGAAGGGAAG...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCGTTTTTGCAACAGTCTaGGTGCTCTTGGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGIVFATV*VLLDPD
Trigger: ATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAAC...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCGGAGCAGTGGCGCAGTaGTGGGGCAAGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPGAVAQ*WGKTKA
Trigger: TGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCC...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTCCTCTAGTGTGGCAATaGAGTCCCGCTTTATCTCTC +
Preference number: 4 (lower is better)
Translates to: GCRPEGIPSPGPFLFSSPPLVWQ*SPALSL
Trigger: GAGAGATAAAGCGGGACTTCATTGCCACACTAGAGG...AGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCGGATATTTCTGTGGATaGTATAATGTCATTAGCCTG +
Preference number: 4 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSGYFCG*YNVISL
Trigger: CAGGCTAATGACATTATATCATCCACAGAAATATCC...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp TGTGGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCTCTGTTTCTGGGAGTTaGGCCATGTCCTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: CGCRPEGIPSPGPFLFSSSVSGS*AMSLTG
Trigger: CCCAGTCAAGGACATGGCTCAACTCCCAGAAACAGA...GCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCGTGTGGGTGCCGGCCTaGAGGAATTCCATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPVWVPA*RNSISW
Trigger: CCAGGAGATGGAATTCCTTCAGGCCGGCACCCACAC...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGAGGCTCCCTTGGACATaGGGGCTTACATGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: QRGWHKDISALFPLTLTERLPWT*GLTCPR
Trigger: CCTAGGACATGTAAGCCCTCATGTCCAAGGGAGCCT...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCATTCCTACTATCTGCATaGGGCTCCCTTGGACATGAG +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPFLLSA*GSLGHE
Trigger: CTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAA...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCGGTCAGGAGGGGGCATaGGGAGGCCAAGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCGQEGA*GGQVWG
Trigger: GCCCCAGACTTGGCCTCCTCATGCCCCCTCCTGACC...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGACACAGGTAATGGCTaGGCCATAAGCAAATCGAGA +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSDTGNG*AISKSR
Trigger: TCTCGATTTGCTTATGGCTCAGCCATTACCTGTGTC...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR TCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACGAATCCGGCTTGACTaGTTTCTTTTGGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPRIRLD*FLLGSP
Trigger: TGGACTCCCCAAAAGAAATCAGTCAAGCCGGATTCG...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp TGTGGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCGGGTACCGCAATACATaGAGTTGGCTGAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CGCRPEGIPSPGPFLFSSGYRNT*SWLRSL
Trigger: CAGAGACCTCAGCCAACTTCATGTATTGCGGTACCC...GCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGGGGAAAGACCAAATCTaGCAGGTCATCATCATGGTA +
Preference number: 4 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPGKDQI*QVIIMV
Trigger: TACCATGATGATGACCTGGCAGATTTGGTCTTTCCC...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAGTAGGTGCAGCTGACTaGCCCACATCCTGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTVGAAD*PTSCRD
Trigger: ATCTCTGCAGGATGTGGGGCAGTCAGCTGCACCTAC...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp AAGTCTGGGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCCTTCTCAGGAGCCTTTaGATCTGCAATGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KSGAASSEANLHCSQSPSLLRSL*ICNGLW
Trigger: CCAAAGCCCATTGCAGATGCAAAGGCTCCTGAGAAG...GGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAACGCAGGTTGTTTCTGTaGACTTGCAATTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLERRLFL*TCNWAG
Trigger: GCCGGCCCAATTGCAAGTGCACAGAAACAACCTGCG...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCACAGAGGAGCCTCGCTaGCACCGCCCTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPTEEPR*HRPQSS
Trigger: TGAAGACTGAGGGCGGTGGCAGCGAGGCTCCTCTGT...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp AGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTAGCCAGCTTCAGGCGCTaGCTCAGAGATGGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RTASLHMEIKSKLRSRPLASFRR*LRDGRL
Trigger: GAGCCGGCCATCTCTGAGGCAGCGCCTGAAGCTGGC...TAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGGAATGGGACAGAGATaGCAAAACCAGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GCRPEGIPSPGPFLFSSPGMGQR*QNQPLG
Trigger: ACCAAGAGGCTGGTTTTGGCATCTCTGTCCCATTCC...AGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCCTGTGCTGTTGCCCCTGAGGTGTCTCCTGACTACGCAACCCTGTTTCCTTCCACAGCAGAAGTGTTCTaGACATGGTCTCTACGGAGG +
Preference number: 4 (lower is better)
Translates to: ACAVAPEVSPDYATLFPSTAEVF*TWSLRR
Trigger: CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGT...GGAAGGAAACAGGGTTGCGTAGTCAGGAGACACCTCAGGGGCAACAGCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR GCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTAGCCCATCTTTTGGTTaGCCGTCCATGCTGACATTC +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPSPSFG*PSMLTF
Trigger: GAATGTCAGCATGGACGGGCAACCAAAAGATGGGCT...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp GCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTCCTCCTTTTTGTGTGTCAGCTaGAAATGGATGACCTTTAGG +
Preference number: 4 (lower is better)
Translates to: AAIPRPSWDALCGPCLSSFLCVS*KWMTFR
Trigger: CCTAAAGGTCATCCATTTGCAGCTGACACACAAAAA...GGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp CAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAACCAACACTTGGCCCTaGAGCTGCTCAGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: QTSTRHCYLRKGEDLSGPTNTWP*SCSEVK
Trigger: CTTTACTTCTGAGCAGCTGCAGGGCCAAGTGTTGGT...TGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGCCTCCTGCAGGTAGGTaGCCCACATTATCGAGGGAT +
Preference number: 4 (lower is better)
Translates to: QRGWHKDISALFPLTLTEPPAGR*PTLSRD
Trigger: ATCCCTCGATAATGTGGGCCACCTACCTGCAGGAGG...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CTCCAGAGAAGCCCTTGGAATCTCCCAGGCCATTTCACTACAAACTTATGTTTGCCGCCGAGACGGAGCTaGGGCAGAAGGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LQRSPWNLPGHFTTNLCLPPRRS*GRREPG
Trigger: TCCTGGCTCCCTTCTGCCCCAGCTCCGTCTCGGCGG...CAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCATTCTGTTTCTGGAGGTaGAGTCACATCCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QTSTRHCYLRKGEDLSGPFCFWR*SHILAQ
Trigger: CTGGGCAAGGATGTGACTCCACCTCCAGAAACAGAA...TGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGGCCACCTCCATTTCTaGAGGCAGACATACGTTCTT +
Preference number: 4 (lower is better)
Translates to: QTSTRHCYLRKGEDLSGPGHLHF*RQTYVL
Trigger: AAGAACGTATGTCTGCCTCCAGAAATGGAGGTGGCC...TGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp TCTGACCACTCCTGTTGTCTACCTAGAGAGCACGCCACTTGGGCCACCTACCCCTTCTGTTTTGAGGGCTaGGACCTGATCCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SDHSCCLPREHATWATYPFCFEG*DLILSQ
Trigger: CTGACTGAGGATCAGGTCCCAGCCCTCAAAACAGAA...GGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395734.7
CDS-3UTR CCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGTGGAACATCTTTaGCTGGAGTCACATTGTTGG +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSVVEHL*LESHCW
Trigger: CCAACAATGTGACTCCAGCCAAAGATGTTCCACCAC...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCATCTTTGCAGGTTGAGTaGTGGCCAAAGGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPSLQVE*WPKALF
Trigger: AAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGA...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGTCTTTGCAGGTTGAGTaGTGGCCAAAGGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPSLQVE*WPKALF
Trigger: AAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGA...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGTAAGATGGAAGGCCTaGCAGAGGCGACGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKAVRWKA*QRRRQG
Trigger: GCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTAC...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAATCTAAACTTAGGTCAAGACCCCTACCTTCTCCAGGGATGCCAGGACCAGAGGTAAGATGGAAGGCCTaGCAGAGGCGACGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KSKLRSRPLPSPGMPGPEVRWKA*QRRRQG
Trigger: GCCCTGCCGTCGCCTCTGCCAGGCCTTCCATCTTAC...CTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCCTTTGCATCTGCAATaGGCTTTGGCTTCACGTCTT +
Preference number: 4 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLPLHLQ*ALASRL
Trigger: AAGACGTGAAGCCAAAGCCCATTGCAGATGCAAAGG...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TTCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCCCTTTGCATCTGCAATaGGCTTTGGCTTCACGTCTT +
Preference number: 4 (lower is better)
Translates to: FPGFLLTAAIPRPSWDALPLHLQ*ALASRL
Trigger: AAGACGTGAAGCCAAAGCCCATTGCAGATGCAAAGG...GAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTCTGTGCACTTGCAATTaGGCCGGCTGTTTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: GCRPEGIPSPGPFLFSSPLCTCN*AGCFSD
Trigger: GTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAG...AGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCGCGCTGCCTCAGAGATaGCCGGCTCCTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCALPQR*PAPPQQ
Trigger: CTGCTGGGGAGGAGCCGGCCATCTCTGAGGCAGCGC...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAATTTCCAGACCTGATTTCCTACTATCTGCATGAGGCTCCCTTGGACATGAGGGCGCTGCCTCAGAGATaGCCGGCTCCTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KFPDLISYYLHEAPLDMRALPQR*PAPPQQ
Trigger: CTGCTGGGGAGGAGCCGGCCATCTCTGAGGCAGCGC...CCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAACAGAGGGAGAGGCAGTaGCTTAAGCTCCACGGTCAG +
Preference number: 4 (lower is better)
Translates to: WGARDMVSNLHKALLPQKQRERQ*LKLHGQ
Trigger: CTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTG...TTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TCTGCAGTGACATGGGAGGAGGGAAGGGAGAGGGGAACAGGGGAGACAAGAGGGTTTGGAAATCTGGGCTaGGGCTATCTCTTGCCCATT +
Preference number: 4 (lower is better)
Translates to: SAVTWEEGRERGTGETRGFGNLG*GYLLPI
Trigger: AATGGGCAAGAGATAGCCCCAGCCCAGATTTCCAAA...CCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGAGACTTTGGCAAAAGTaGAGTAAGTCCTCGGGACTT +
Preference number: 4 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPRLWQK*SKSSGL
Trigger: AAGTCCCGAGGACTTACTCCACTTTTGCCAAAGTCT...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGGCAGGAGTGAAAGGACCTaGAACCTGTCGTCAACCTCA +
Preference number: 4 (lower is better)
Translates to: CRPEGIPSPGPFLFSSPGRSERT*NLSSTS
Trigger: TGAGGTTGACGACAGGTTCCAGGTCCTTTCACTCCT...GCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCAGAGAGCACGCCACTTaGGCCACCTACCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPREHAT*ATYPQP
Trigger: AGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCTCT...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCACAAGCCCATCTTTTaGTTGCCCGTCCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSHKPIF*LPVHAD
Trigger: GTCAGCATGGACGGGCAACCAAAAGATGGGCTTGTG...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCAAAATCCAGATCTGACTaGCTCTTGGTCTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPKSRSD*LLVSSP
Trigger: TGGACTAGAGACCAAGAGCCAGTCAGATCTGGATTT...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTGTGGGGTGCAGGCTGTaGTTTGTATTCATGTTGCTT +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTVGCRL*FVFMLL
Trigger: AAGCAACATGAATACAAACCACAGCCTGCACCCCAC...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp TCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGGACAGTGTCACCTTGGCAGGTaGTTCAGTAACAGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: STRHCYLRKGEDLSGPGQCHLGR*FSNSRS
Trigger: GCTTCTACTGTTACTGAACCACCTGCCAAGGTGACA...CTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACACTCCAGGCTGATGCTTaGTGTTTTCCGTGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTLQADA*CFPWSQ
Trigger: TTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAG...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTCGGCCTCCTCCAGGCTaGTGCTTGATGTTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: PLSSQGIREADSLSLMPFRPPPG*CLMFSV
Trigger: CACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCG...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTTCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTTCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCGCCTTCGCTGTTCTATaGTGGCCGTCGCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPAFAVL*WPSLSL
Trigger: GAGAGAGAGCGACGGCCATCATAGAACAGCGAAGGC...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR TCA 90 bp GTGTCTCCTGACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCCCTCTAGTGTGGCAATaGAGTCCCGCTTTATCTCTC +
Preference number: 4 (lower is better)
Translates to: VSPDYATLFPSHFHPSRPPLVWQ*SPALSL
Trigger: GAGAGATAAAGCGGGACTTCATTGCCACACTAGAGG...GGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395734.7
CDS-3UTR TCA 90 bp TGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGGCTTTTCCCCGTTCCTGTaGCGGTTTCTGGTGAAATCA +
Preference number: 4 (lower is better)
Translates to: CRPEGIPSPGPFLFSSPGFSPFL*RFLVKS
Trigger: TGATTTCACCAGAAACCGTCACAGGAACGGGGAAAA...GCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp TTCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGACTTTCTCTACTaGATGCTTAGACGCACCACT +
Preference number: 4 (lower is better)
Translates to: FPGFLLTAAIPRPSWDALCDFLY*MLRRTT
Trigger: AGTGGTGCGTCTAAGCATTCAGTAGAGAAAGTCACA...GAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCTTCCTACTATCTGCATaGGGCTCCCTTGGACATGAG +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSFLLSA*GSLGHE
Trigger: CTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAA...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAACTTTGGCCAAAGGAGTaGAAGGACCTGGAACCTGTC +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLELWPKE*KDLEPV
Trigger: GACAGGTTCCAGGTCCTTTCACTCCTTTGGCCAAAG...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR TCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACATTCGAATCCGGCTTaGCTGATTTCTTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPHSNPA*LISFGE
Trigger: CTCCCCAAAAGAAATCAGTCAAGCCGGATTCGAATG...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGAGATATAAAGGAATTCTaGGACTCTCTGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGDIKEF*DSLRQS
Trigger: ACTTTGTCTCAGAGAGTCTCAGAATTCCTTTATATC...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTCCACCTCCAGGGACATaGTTAATATTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSPPPGT*LILSLE
Trigger: TTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp TCAGGCCCAGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAACCTCGGCCGGCAAGCTaGACTTTTTCCCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SGPGQPPCTWRSNLNLGQPRPAS*TFSPFL
Trigger: CAGGAACGGGGAAAAAGTGCAGCTTGCCGGCCGAGG...TTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCAGGAGCCTTTGCATCTaGAATGGGCTTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSRSLCI*NGLWLH
Trigger: GTGAAGCCAAAGCCCATTGCAGATGCAAAGGCTCCT...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp AAATTTCCAGACCTGATTTCCTACTATCTGCATGAGGCTCCCTTGGACATGAGGGCCAGCTTCAGGCGCTaGCTCAGAGATGGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: KFPDLISYYLHEAPLDMRASFRR*LRDGRL
Trigger: GAGCCGGCCATCTCTGAGGCAGCGCCTGAAGCTGGC...CCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCTCCAGGGCCCTAAGCTaGCCACATCCTCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCSRALS*PHPPAG
Trigger: CCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGA...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTTTAGACGCACCACTGTaGACTGACTCAGATTCTCCT +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPLDAPL*TDSDSP
Trigger: AGGAGAATCTGAGTCAGTGCACAGTGGTGCGTCTAA...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp GGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTCCAGCGGACTTCAGTTaGTTATGTCTCTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GCRPEGIPSPGPFLFSSPPADFS*LCLSCS
Trigger: GGAACAAGAGAGACATAAGCAACTGAAGTCCGCTGG...AGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp AAGTCTGGGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCCCAGCGGACTTCAGTTaGTTATGTCTCTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: KSGAASSEANLHCSQSPSPADFS*LCLSCS
Trigger: GGAACAAGAGAGACATAAGCAACTGAAGTCCGCTGG...GGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp ACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCTTTCTTCCTGTACCTTCTCCAGGGATaGCAGGACCAGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: TTQPCFLPTFIPAGPFFLYLLQG*QDQRRA
Trigger: TGCCCTTCTCTGGTCCTGGCATCCCTGGAGAAGGTA...CAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR GCA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGCCCACCCCAAACAGCTaGGGAGTACACATCACACAG +
Preference number: 4 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRPTPNS*GVHITQ
Trigger: CTGTGTGATGTGTACTCCGCAGCTGTTTGGGGTGGG...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR GCA 90 bp GGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATGGGAGGAGGGAAGGGAGACTTGGCCCTGCAGCTaGTCAGAAGTAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: GTSACRSQSAVTWEEGRETWPCS*SEVKML
Trigger: CAGCATCTTTACTTCTGAGCAGCTGCAGGGCCAAGT...CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAAGAGCTCCTTGTTCGGTaGGGTGGTGATGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEELLVR*GGDVIS
Trigger: GGAAATGACATCACCACCCCACCGAACAAGGAGCTC...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCTCTTGGACCCAGATCTaGAGGCTGGGGCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPSWTQI*RLGQKL
Trigger: CAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGA...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGCAGTCTGAGTGCTCTTaGACCCAGATCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRQSECS*TQIWRL
Trigger: CAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTG...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTTTTTCTTCATGGAACTaGTGGAGGTGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPFSSWN*WRCSLG
Trigger: GCCCAAAGAGCACCTCCACCAGTTCCATGAAGAAAA...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTTTTTCTTCATGGAACTaGTGGAGGTGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPFSSWN*WRCSLG
Trigger: GCCCAAAGAGCACCTCCACCAGTTCCATGAAGAAAA...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TCTGACCACTCCTGTTGTCTACCTAGAGAGCACGCCACTTGGGCCACCTACCCCCCTTGGAACCACACTTaGACTGAATATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SDHSCCLPREHATWATYPPWNHT*TEYGCS
Trigger: GCTACAGCCATATTCAGTCCAAGTGTGGTTCCAAGG...GGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000395734.7
CDS-3UTR CCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAATTTCCAGACCTGATTTCCTACTATCTGCATGAGGCTCCCTTGGACATGAGGGCCGCCAGGGAAGTGTaGGGGGCGGGAGACAATGTC +
Preference number: 4 (lower is better)
Translates to: KFPDLISYYLHEAPLDMRAAREV*GAGDNV
Trigger: GACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGC...CCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TGCAGTACTGGTGGCCTCAACCCCTTTATGAAAACACATGTTCTCATTTGGTGTCCGCCGAGACGGAGCTaGGGCAGAAGGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSTGGLNPFMKTHVLIWCPPRRS*GRREPG
Trigger: TCCTGGCTCCCTTCTGCCCCAGCTCCGTCTCGGCGG...ACACCAAATGAGAACATGTGTTTTCATAAAGGGGTTGAGGCCACCAGTACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439356.2
CDS-3UTR CCA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTTTCAAGGAATTCAGTTaGAGACCCTGTAGTATCGCT +
Preference number: 4 (lower is better)
Translates to: AAHILQRGWHKDISALFPFKEFS*RPCSIA
Trigger: AGCGATACTACAGGGTCTCCAACTGAATTCCTTGAA...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTAAAGTTGGTATCTTCTaGCCAGTTCTGGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: GRCGPWHLPGTSACRSQSKVGIF*PVLAIW
Trigger: CCAAATAGCCAGAACTGGCCAGAAGATACCAACTTT...AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTAAAGTTGGTATCTTCTaGCCAGTTCTGGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: AAHILQRGWHKDISALFPKVGIF*PVLAIW
Trigger: CCAAATAGCCAGAACTGGCCAGAAGATACCAACTTT...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTTTAAAGGGATCAGTCTaGATAGGATCGACCACTTGC +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTLKGSV*IGSTTC
Trigger: GCAAGTGGTCGATCCTATCCAGACTGATCCCTTTAA...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTTTAAAGGGATCAGTCTaGATAGGATCGACCACTTGC +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSLKGSV*IGSTTC
Trigger: GCAAGTGGTCGATCCTATCCAGACTGATCCCTTTAA...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGGCCAGGTCATCATCATaGTACATCTTAAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPARSSS*YILKGS
Trigger: TGATCCCTTTAAGATGTACCATGATGATGACCTGGC...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCATATCTGATTCCATaGATGGCTGCATGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPPYLIP*MAACPW
Trigger: CCAAGGACATGCAGCCATCCATGGAATCAGATATGG...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCTGGAGTCACATTGTTaGCCAGGGTCAGAACCCCAT +
Preference number: 4 (lower is better)
Translates to: VSWCVLGELGTWCQTSTRLESHC*PGSEPH
Trigger: ATGGGGTTCTGACCCTGGCCAACAATGTGACTCCAG...CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GTGAGCCCCTGCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCATGGAACATCTTTGGCTaGAGTCACATTGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VSPCSFLVCAWGARDMVSWNIFG*SHIVGQ
Trigger: CTGGCCAACAATGTGACTCCAGCCAAAGATGTTCCA...TGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGAAGTGGGCTGTGTTTTaGCTTTCGATGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPKWAVF*LSMLKS
Trigger: AGACTTCAACATCGAAAGCCAAAACACAGCCCACTT...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAAATGGTGGTGGGAGCTaGCTGCTTAGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SSEANLHCSQSPSREALGNGGGS*LLRERS
Trigger: ACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATT...TCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GTGAGCCCCTGCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCACCTTTGCATCTGCAATaGGCTTTGGCTTCACGTCTT +
Preference number: 4 (lower is better)
Translates to: VSPCSFLVCAWGARDMVSPLHLQ*ALASRL
Trigger: AAGACGTGAAGCCAAAGCCCATTGCAGATGCAAAGG...TGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCCAGAGGGAGAGGCAGTaGCTTAAGCTCCACGGTCAG +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPQRERQ*LKLHGQ
Trigger: CTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTG...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTGGGTCTTTCTTGACCTaGGACTCCATCTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPGSFLT*DSIFGV
Trigger: TACACCAAAGATGGAGTCCCAGGTCAAGAAAGACCC...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGTTCCTTCTTCTGGCCTaGCTATTCCAGCGGACTTCA +
Preference number: 4 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRFLLLA*LFQRTS
Trigger: TGAAGTCCGCTGGAATAGCCAGGCCAGAAGAAGGAA...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCTTCCTTCTTCTGGCCTaGCTATTCCAGCGGACTTCA +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSFLLLA*LFQRTS
Trigger: TGAAGTCCGCTGGAATAGCCAGGCCAGAAGAAGGAA...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTGCCCCTGCAGTTTCCTaGTGTGTGCTTGGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: PLSSQGIREADSLSLMPFAPAVS*CVLGEL
Trigger: TAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGC...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTAGAGAGCACGCCACTTaGGCCACCTACCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKAREHAT*ATYPQP
Trigger: AGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCTCT...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp TCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAATCAAGAGTCTTCCATaGAGGAGAGCCTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSEANLHCSQSPSREALGIKSLP*RRASQQ
Trigger: CTGCTGGGAGGCTCTCCTCCATGGAAGACTCTTGAT...TCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAAGGTCCTCCAGCCCGTaGTTGAGAATATCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: QTSTRHCYLRKGEDLSGPRSSSP*LRISLL
Trigger: CAAAAGAGATATTCTCAACCACGGGCTGGAGGACCT...TGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTTTCAGTTTTAGAGACTaGCTCACTCGGTATGAGAAC +
Preference number: 4 (lower is better)
Translates to: AAHILQRGWHKDISALFPFSFRD*LTRYEN
Trigger: GTTCTCATACCGAGTGAGCCAGTCTCTAAAACTGAA...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACTTCCTTCCTTGCTCTaGTTATTGACACCCATATCT +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSLPSLL*LLTPIS
Trigger: AGATATGGGTGTCAATAACCAGAGCAAGGAAGGAAG...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGCTGGCTTGGATGGTaGGGCCCGCTTCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCSWLGW*GPLLRS
Trigger: GCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCT...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCGTTTTTGCAACAGTCTaGGTGCTCTTGGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSVFATV*VLLDPD
Trigger: ATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAAC...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp GGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTTCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: GTAEVFCTWSLRRKAGPPSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...AGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTTGGAATTTCTATCTTaGGCATTTTGGTCCTCACAA +
Preference number: 4 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLLEFLS*AFWSSQ
Trigger: TTGTGAGGACCAAAATGCTCAAGATAGAAATTCCAA...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp TGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAACTTTGGCCAAAGGAGTaGAAGGACCTGGAACCTGTC +
Preference number: 4 (lower is better)
Translates to: WGARDMVSNLHKALLPQKLWPKE*KDLEPV
Trigger: GACAGGTTCCAGGTCCTTTCACTCCTTTGGCCAAAG...TTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR TCA 90 bp TGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAACCAGAGACCCAACCTaGCTCAGACAAAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: WGARDMVSNLHKALLPQKTRDPT*LRQRAV
Trigger: CACTGCTCTTTGTCTGAGTCAGGTTGGGTCTCTGGT...TTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCATCAGCTGCAAATGGATaGCCTTTAGGCTTATCTGCA +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPSAANG*PLGLSA
Trigger: TGCAGATAAGCCTAAAGGTCATCCATTTGCAGCTGA...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTAGTCTGAGTCATGCCTaGTCCACTTTCCAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPSLSHA*STFQRN
Trigger: ATTCCTTTGGAAAGTGGATCAGGCATGACTCAGACT...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTCAGGGAGCTGCCTCATaGTCCTTCCATGGACACCTT +
Preference number: 4 (lower is better)
Translates to: PLSSQGIREADSLSLMPFQGAAS*SFHGHL
Trigger: AAGGTGTCCATGGAAGGATCATGAGGCAGCTCCCTG...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp CCTGTAGAAGAGGGAATGCTTCCTAAATTCCGGAAGTCGCTGCAAGGATTCAGTGGCAGGAGAACCACTTaGACCTGGGAGGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PVEEGMLPKFRKSLQGFSGRRTT*TWEAEG
Trigger: ACCCTCTGCCTCCCAGGTTCAAGTGGTTCTCCTGCC...ACTGAATCCTTGCAGCGACTTCCGGAATTTAGGAAGCATTCCCTCTTCTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCCTCGCTGGCAAACCTaGGAGCATGAATCAATTCTA +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSPRWQT*EHESIL
Trigger: TAGAATTGATTCATGCTCGCAGGTTTGCCAGCGAGG...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCATGGAGTGCTCTGGGTTaGAGTGACCTCAATTTCTTT +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPWSALG*SDLNFF
Trigger: AAAGAAATTGAGGTCACTGCAACCCAGAGCACTCCA...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGCCTCCACCAGGCTTGTaGTTGATGTTAGCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: QRGWHKDISALFPLTLTEPPPGL*LMLALD
Trigger: GTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGG...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTGTGGGGCAGGGCTGCTaGTGCCCCGGGCACGCAAAG +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTIVGQGC*CPGHAK
Trigger: CTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCCAC...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCAGCCATTCTGCACCACTaGAACTGCCCGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GFRSITMLRKDHWSGVAAAILHH*NCPPPP
Trigger: CGGCGGCGGCGGGCAGTTGCAGTGGTGCAGAATGGC...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439356.2
CDS-3UTR GCA 90 bp TTCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCATAGGATCGACCACTTaGTCAGGTTGGAAACAAAAG +
Preference number: 4 (lower is better)
Translates to: FPGFLLTAAIPRPSWDALIGSTT*SGWKQK
Trigger: CTTTTGTTTCCAACCTGAGCAAGTGGTCGATCCTAT...GAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCGTACAACAGCTGTGTTaGAGGGAGACATACCGTAAC +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSVQQLC*RETYRN
Trigger: GTTACGGTATGTCTCCCTGCAACACAGCTGTTGTAC...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp CAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCATTGTTTCTGTGCACTTaGAATTGGGCCGGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: QTSTRHCYLRKGEDLSGPLFLCT*NWAGCF
Trigger: AAAACAGCCGGCCCAATTGCAAGTGCACAGAAACAA...TGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCGACATGGCTTCAACCTaGAGAACTATTTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLDMAST*RTILPV
Trigger: AACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTC...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCAAGGAAGGAACCTGCTaGTTTCTGCACAACAAAATG +
Preference number: 4 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLKEGTC*FLHNKM
Trigger: CATTTTGTTGTGCAGAAAGCAGCAGGTTCCTTCCTT...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCTGTCCTGCATTTCAATaGTCAGCTCTTTGTCTAGCT +
Preference number: 4 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGICPAFQ*SALCLA
Trigger: AGCTAGACAAAGAGCTGAGCATTGAAATGCAGGACA...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTACCTTTAGGCTTATCTaGATTGTCATCATCCGAAGG +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTTFRLI*IVIIRR
Trigger: CCTTCGGATGATGACAATGCAGATAAGCCTAAAGGT...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp GTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGGCCTTAGTGCCTGGTTaGTTTGAAGAATTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: VSWCVLGELGTWCQTSTRALVPG*FEEFSP
Trigger: GGGGCTGAATTCTTCAAAGCAACCAGGCACTAAGGC...CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGAAAGGAATCAATGCCTaGATGGTGCCTGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRKGINA*MVPATL
Trigger: TAAGGTGGCAGGCACCATGCAGGCATTGATTCCTTT...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCAACGATGGAGTGCTCTaGGTTGCAGTGACCTCAATT +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSNDGVL*VAVTSI
Trigger: AATTGAGGTCACTGCAACCCAGAGCACTCCATCGTT...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCCAGTCTGAGTGCTCTTaGACCCAGATCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPQSECS*TQIWRL
Trigger: CAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTG...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp ACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCTTTCTTCCTGTCTTCATGGAACTGGTaGAGGTGCTCTTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: TTQPCFLPTFIPAGPFFLSSWNW*RCSLGD
Trigger: GTCGCCCAAAGAGCACCTCCACCAGTTCCATGAAGA...CAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCTTTTCTTCATGGAACTaGTGGAGGTGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSFSSWN*WRCSLG
Trigger: GCCCAAAGAGCACCTCCACCAGTTCCATGAAGAAAA...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTTTTTCTTCATGGAACTaGTGGAGGTGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GTAEVFCTWSLRRKAGPPFSSWN*WRCSLG
Trigger: GCCCAAAGAGCACCTCCACCAGTTCCATGAAGAAAA...AGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTTTCAAGGAATTCAGTTaGAGACCCTGTAGTATCGCT +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTFKEFS*RPCSIA
Trigger: AGCGATACTACAGGGTCTCCAACTGAATTCCTTGAA...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTTCTTCTGGCCAGTTCTaGCTATTTGGGTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GTAEVFCTWSLRRKAGPPSSGQF*LFGYSW
Trigger: CCAGGAATACCCAAATAGCCAGAACTGGCCAGAAGA...AGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCAGCTCTGTTTCTTTAGATaGTGCCATGTCAGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: GAGPGICPERQPVGLNLQLCFFR*CHVSSL
Trigger: AAGACTACTGACATGGCACCATCTAAAGAAACAGAG...CTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGACGGAGCCACATCCTTaGCCGGGGCTATTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRTEPHP*PGLFLF
Trigger: AAACAGAAATAGCCCCGGCCAAGGATGTGGCTCCGT...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTAACTACTTCTGTTTCTaGAGGTGGAGTCACATCCTT +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSNYFCF*RWSHIL
Trigger: AAGGATGTGACTCCACCTCCAGAAACAGAAGTAGTT...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTTTGCAGGTTGAGTGGTaGCCAAAGGCTTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPLQVEW*PKALFS
Trigger: AGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAA...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCAAGTGGGCTGTGTTTTaGCTTTCGATGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGIKWAVF*LSMLKS
Trigger: AGACTTCAACATCGAAAGCCAAAACACAGCCCACTT...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCAATTACTCCTTTTACTTaGTTTGTCAGCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSITPFT*FVSHCS
Trigger: ACTGCAGTGGCTGACAAACCAAGTAAAAGGAGTAAT...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCATTTTGCCAAGGTATCTaGAAAGGAATCACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSFCQGI*KGITFL
Trigger: AAGGAAGGTGATTCCTTTCCAGATACCTTGGCAAAA...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGGAGTCGAACACCCTTaGAAGCAGTCATTATTACTA +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSGVEHP*KQSLLL
Trigger: TAGTAATAATGACTGCTTCCAAGGGTGTTCGACTCC...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp TGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGTCCTCGGGACTTGGTaGGTCTCATGTAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: WGARDMVSNLHKALLPQKVLGTW*VSCSLS
Trigger: TGAAAGGCTACATGAGACCCACCAAGTCCCGAGGAC...TTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAATCTAAACTTAGGTCAAGACCCCTACCTTCTCCAGGGATGCCAGGACCAGAGGCCCCTGCAGTTTCCTaGTGTGTGCTTGGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: KSKLRSRPLPSPGMPGPEAPAVS*CVLGEL
Trigger: TAGCTCCCCAAGCACACACCAGGAAACTGCAGGGGC...CTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACCAGGACAGACGCAGTaGAGGCAGCAGGTACTCTGG +
Preference number: 4 (lower is better)
Translates to: RTASLHMEIKSKLRSRPLPGQTQ*RQQVLW
Trigger: CCAGAGTACCTGCTGCCTCCACTGCGTCTGTCCTGG...TAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
3UTR CAA 72 bp CTCCATCAAACCCTGCAGAGCACAAGAGGAAGCAGGTaGTTTGCTCAGGCATCAGCAGAAATAGGCCCCGAA +
Preference number: 4 (lower is better)
Translates to: LHQTLQSTRGSR*FAQASAEIGPE
Trigger: TTCGGGGCCTATTTCTGCTGATGCCTGAGCAAACAACCTGCTTCCTCTTGTGCTCTGCAGGGTTTGATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp TCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAGTTTTTGCAACAGTCTaGGTGCTCTTGGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: SSEANLHCSQSPSREALGVFATV*VLLDPD
Trigger: ATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAAC...TCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCGAAAGTAGGTGCAGCTaGCTGCCCCACATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: MRIESGSPLLDPNLASTTESRCS*LPHILQ
Trigger: CTGCAGGATGTGGGGCAGTCAGCTGCACCTACTTTC...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGTTTTCCCCGTTCCTGTaGCGGTTTCTGGTGAAATCA +
Preference number: 4 (lower is better)
Translates to: QRGWHKDISALFPLTLTEFSPFL*RFLVKS
Trigger: TGATTTCACCAGAAACCGTCACAGGAACGGGGAAAA...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTCAGTGGCCCAGCCTGTaGTCAAGAGTCTTCCATGGA +
Preference number: 4 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKAQWPSL*SRVFHG
Trigger: TCCATGGAAGACTCTTGATCACAGGCTGGGCCACTG...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp AAGCAGGTTGTTTGCTCAGGCATCAGCAGAAATAGGCCCCGAAGAACTACCCTCAGAATCCAGCCCTTGTaGCCAGACCCCTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: KQVVCSGISRNRPRRTTLRIQPL*PDPCRR
Trigger: TCTTCTACAGGGGTCTGGTCACAAGGGCTGGATTCT...GAGGGTAGTTCTTCGGGGCCTATTTCTGCTGATGCCTGAGCAAACAACCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCTGGAGGGGCTCCTACTaGTTGGGCCAGTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: MRIESGSPLLDPNLASTTWRGSY*LGQLRQ
Trigger: TTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCA...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GCCACTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTGAAAGGACCTGGACATCTTCTTGACTTCTaGAGGTTTTCCCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ATWATYPQPLAKGVKGPGHLLDF*RFSLSL
Trigger: AAGACTGAGGGAAAACCTGCAGAAGTCAAGAAGATG...TCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR GCA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGCCTCCACCAGGCTTGTaGTTGATGTTAGCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRPPPGL*LMLALD
Trigger: GTCTAAGGCTAACATCAAGCACAAGCCTGGTGGAGG...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATGGGAGGAGGGAAGGGAGGGGAAAGACCAAATCTaGCAGGTCATCATCATGGTA +
Preference number: 4 (lower is better)
Translates to: GTSACRSQSAVTWEEGREGKDQI*QVIIMV
Trigger: TACCATGATGATGACCTGGCAGATTTGGTCTTTCCC...CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR GCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCGGGAAAGACCAAATCTaGCAGGTCATCATCATGGTA +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSGKDQI*QVIIMV
Trigger: TACCATGATGATGACCTGGCAGATTTGGTCTTTCCC...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATGGGAGGAGGGAAGGGAGCATCATTATTTCCAATaGTTGTGCTGGTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GTSACRSQSAVTWEEGREHHYFQ*LCWWPL
Trigger: GAGAGGCCACCAGCACAAGCATTGGAAATAATGATG...CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR GCA 90 bp AAATTTCCAGACCTGATTTCCTACTATCTGCATGAGGCTCCCTTGGACATGAGGGTGGTGGGAGCTGGCTaGTTAGGGAGAGAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: KFPDLISYYLHEAPLDMRVVGAG*LGREVG
Trigger: GCCCACTTCTCTCCCTAAGCAGCCAGCTCCCACCAC...CCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCCCCTTCATCGATCCCTaGTTCATTTTTCATGGAATC +
Preference number: 4 (lower is better)
Translates to: QQKCSAHGLYGGKLVPLAPFIDP*FIFHGI
Trigger: GATTCCATGAAAAATGAAGCAGGGATCGATGAAGGG...GGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp TCTGCAGTGACATGGGAGGAGGGAAGGGAGAGGGGAACAGGGGAGACAAGAGGGTTCATTCACTGGATGTaGTGGGAAATTACCTCTATC +
Preference number: 4 (lower is better)
Translates to: SAVTWEEGRERGTGETRGFIHWM*WEITSI
Trigger: GATAGAGGTAATTTCCCAGCACATCCAGTGAATGAA...CCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp CTCCAGAGAAGCCCTTGGAATCTCCCAGGCCATTTCACTACAAACTTATGTTTGCCCGGCCTTCTCAGGTaGTCTGGAGTGGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: LQRSPWNLPGHFTTNLCLPGLLR*SGVEDP
Trigger: AGGATCCTCCACTCCAGAGCACCTGAGAAGGCCGGG...CAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR GCA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACAATTTCATTCAGTTTaGCCTCTGTCCTCTGCCATT +
Preference number: 4 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPQFHSV*PLSSAI
Trigger: AATGGCAGAGGACAGAGGGCAAACTGAATGAAATTG...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp AAATTTCCAGACCTGATTTCCTACTATCTGCATGAGGCTCCCTTGGACATGAGGTGGGCCGGGTTGACCTaGGGTCACTGGGTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KFPDLISYYLHEAPLDMRWAGLT*GHWVCK
Trigger: TTTGCAGACCCAGTGACCGCAGGTCAACCCGGCCCA...CCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp TGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGGCGCTTTTGCCATCACCTaGCATTCTCTTAAATGGTTC +
Preference number: 4 (lower is better)
Translates to: CRPEGIPSPGPFLFSSPGAFAIT*HSLKWF
Trigger: GAACCATTTAAGAGAATGGCAGGTGATGGCAAAAGC...GCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp AAGCAGGTTGTTTGCTCAGGCATCAGCAGAAATAGGCCCCGAAGAACTACCCTCCCTGACCAGTCTGGCTaGCTCACCATTGAGATACTG +
Preference number: 4 (lower is better)
Translates to: KQVVCSGISRNRPRRTTLPDQSG*LTIEIL
Trigger: CAGTATCTCAATGGTGAGGCAGCCAGACTGGTCAGG...GAGGGTAGTTCTTCGGGGCCTATTTCTGCTGATGCCTGAGCAAACAACCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCCCCAGATCTGGAGGCTaGGGCAGAAGCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCPRSGG*GRSWLG
Trigger: TCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGG...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TCAGGCCCAGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAACAGTCTGAGTGCTCTTaGACCCAGATCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGPGQPPCTWRSNLNLGQQSECS*TQIWRL
Trigger: CAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTG...TTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAATGGTGGTTTTCTTCATaGAACTGGTGGAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEWWFSS*NWWRCS
Trigger: AGAGCACCTCCACCAGTTCCATGAAGAAAACCACCA...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCATGTTGGTTTAGAAGATaGAGTATCTTCAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPCWFRR*SIFNLA
Trigger: AGCCAGATTGAAGATACTCCATCTTCTAAACCAACA...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000395734.7
CDS-3UTR CCA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCACCACTTGCTCAGGTTaGAAACAAAAGTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGITTCSG*KQKLVS
Trigger: AGATACCAACTTTTGTTTCCAACCTGAGCAAGTGGT...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCCTAGTGCCATGTCCTTaGCGAGGGCCATCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPLVPCP*RGPSLF
Trigger: AAACAGAGATGGCCCTCGCCAAGGACATGGCACTAG...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCAGGTGTCACATCTAATTTaGTGGGTGATTCCATATCTT +
Preference number: 4 (lower is better)
Translates to: GAGPGICPERQPVGLNLQVSHLI*WVIPYL
Trigger: AAGATATGGAATCACCCACCAAATTAGATGTGACAC...CTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGGTGTCACATCTAATTTaGTGGGTGATTCCATATCTT +
Preference number: 4 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPVSHLI*WVIPYL
Trigger: AAGATATGGAATCACCCACCAAATTAGATGTGACAC...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp TCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGACCATATCTGATTCCATaGATGGCTGCATGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSEANLHCSQSPSREALGPYLIP*MAACPW
Trigger: CCAAGGACATGCAGCCATCCATGGAATCAGATATGG...TCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGCAGTACCACATTCTTaGCTGAAGATACATCTGTTT +
Preference number: 4 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSAVPHS*LKIHLF
Trigger: AAACAGATGTATCTTCAGCCAAGAATGTGGTACTGC...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp TCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGGACAGGTAGTGCTTTATCCTTaGTCAAGATCACGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: STRHCYLRKGEDLSGPGQVVLYP*SRSRWF
Trigger: AAACCAACGTGATCTTGACCAAGGATAAAGCACTAC...CTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTACGGAGCCACATCCTTaGCCGGGGCTATTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: PLSSQGIREADSLSLMPFTEPHP*PGLFLF
Trigger: AAACAGAAATAGCCCCGGCCAAGGATGTGGCTCCGT...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTAACTACTTCTGTTTCTaGAGGTGGAGTCACATCCTT +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPNYFCF*RWSHIL
Trigger: AAGGATGTGACTCCACCTCCAGAAACAGAAGTAGTT...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTTTGCAGGTTGAGTGGTaGCCAAAGGCTTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GTAEVFCTWSLRRKAGPPLQVEW*PKALFS
Trigger: AGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAA...AGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TCTGCAGTGACATGGGAGGAGGGAAGGGAGAGGGGAACAGGGGAGACAAGAGGGCATGTCAGTTTCTTTTaGGTTTGGACCAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: SAVTWEEGRERGTGETRGHVSFF*VWTKEP
Trigger: TGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATG...CCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAGGGGGCGCCCATTTGTaGGACCAGAGGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KKMRIESGSPLLDPNLASGGAHL*DQRERQ
Trigger: CTGCCTCTCCCTCTGGTCCCACAAATGGGCGCCCCC...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTCCAGATCCCAGGGAATaGGACAGAGATGCCAAAACC +
Preference number: 4 (lower is better)
Translates to: PLSSQGIREADSLSLMPFPDPRE*DRDAKT
Trigger: GGTTTTGGCATCTCTGTCCCATTCCCTGGGATCTGG...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCACTACCATTAATGATTTaGAAATCTGGGCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: QTSTRHCYLRKGEDLSGPLPLMI*KSGLGL
Trigger: TAGCCCCAGCCCAGATTTCCAAATCATTAATGGTAG...TGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp TTCTTCCTGCTGACAAAACACTGGCTCCCTCATGTTCTTGGCACAGCAGAAGTGGGGGAGCTAGGGACATaGTGTCAAACCTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: FFLLTKHWLPHVLGTAEVGELGT*CQTSTR
Trigger: CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCC...CACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGTTACAACAGAATCATaGACTGACACAGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: GCRPEGIPSPGPFLFSSPVTTES*TDTGNG
Trigger: GCCATTACCTGTGTCAGTCCATGATTCTGTTGTAAC...AGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR TCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCTTGTCCTGCAAATATTaGAGTATCAGCTGTCGCACT +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSLSCKY*SISCRT
Trigger: AGTGCGACAGCTGATACTTCAATATTTGCAGGACAA...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGGGGTGGGGTGGCCATTaGGGCCACTGGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILGWGGH*GHWLKW
Trigger: CCACTTCAGCCAGTGGCCTCAATGGCCACCCCACCC...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGCTGGGGAGAACACCTaGTTTTTGTGTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKAAGENT*FLCVSC
Trigger: GCAGCTGACACACAAAAATCAGGTGTTCTCCCCAGC...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTAATTCTGAGACTCTCTaGGACAAAGTTCTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GTAEVFCTWSLRRKAGPPNSETL*DKVLSY
Trigger: GTAGCTGAGAACTTTGTCTCAGAGAGTCTCAGAATT...AGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGTCCTCACTCTTATCCTaGGTAGTCATTCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRSSLLS*VVIPSV
Trigger: AACTGAAGGAATGACTACTCAGGATAAGAGTGAGGA...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTTCAACAAAATTAACCTaGAAATTTCCACCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTSTKLT*KFPPFL
Trigger: CAGGAAGGGTGGAAATTTTCAGGTTAATTTTGTTGA...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCAGGAGCCTTTGCATCTaGAATGGGCTTTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSRSLCI*NGLCFL
Trigger: AAGAAAACAAAGCCCATTGCAGATGCAAAGGCTCCT...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCTGGAGGGGCTCCTACTaGTTGGGCCAGTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCWRGSY*LGQLRQ
Trigger: TTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCA...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGATAGGATCGACCACTTaGTCAGGTTGGAAACAAAAG +
Preference number: 4 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRIGSTT*SGWKQK
Trigger: CTTTTGTTTCCAACCTGAGCAAGTGGTCGATCCTAT...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGGTACAACAGCTGTGTTaGAGGGAGACATACCGTAAC +
Preference number: 4 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRVQQLC*RETYRN
Trigger: GTTACGGTATGTCTCCCTGCAACACAGCTGTTGTAC...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGTGTTTCTTTAGATGGTaGCATGTCAGTAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GQPPQRQIYTAANPPPEKCFFRW*HVSSLQ
Trigger: CTGAAGACTACTGACATGGCACCATCTAAAGAAACA...CTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATGGGAGGAGGGAAGGGAGCATATCTTTAGCCAATaGCACCTCGGTTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: GTSACRSQSAVTWEEGREHIFSQ*HLGFCS
Trigger: GCTACAAAAACCGAGGTGGCATTGGCTAAAGATATG...CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR GCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTGCCAGCTTCAGGCGCTaGCTCAGAGATGGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTIASFRR*LRDGRL
Trigger: GAGCCGGCCATCTCTGAGGCAGCGCCTGAAGCTGGC...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTCCAGGGCCCTAAGCTaGCCACATCCTCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTISRALS*PHPPAG
Trigger: CCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTGGA...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACCTTACCTCCACAAGGCACTaGTACCTCAGAAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QPPCTWRSNLNLGQDPYLTSTRH*YLRKGE
Trigger: CTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGT...AAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CTCCAGAGAAGCCCTTGGAATCTCCCAGGCCATTTCACTACAAACTTATGTTTGTCCTCCGTGAGCCCCTaGAGTTTCCTGGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LQRSPWNLPGHFTTNLCLSSVSP*SFLVCA
Trigger: AGCACACACCAGGAAACTGCAGGGGCTCACGGAGGA...CAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCGACTCACACTTCAGCTaGTCAGAGTTATCATTTACC +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSDSHFS*SELSFT
Trigger: GGTAAATGATAACTCTGAGCAGCTGAAGTGTGAGTC...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCTGCTCCAGCTTACTATaGAGATATAATCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSCSSLL*RYNPAV
Trigger: CACTGCTGGATTATATCTCCATAGTAAGCTGGAGCA...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTGGCAGTGGGCTTCTTaGGCAGGAGCGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTIWQWAS*AGAWRG
Trigger: GCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCCA...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGGCCGCCAGGGAAGTGTaGGGGGCGGGAGACAATGTC +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILAAREV*GAGDNV
Trigger: GACATTGTCTCCCGCCCCCCACACTTCCCTGGCGGC...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTCGCCCAAGCGCTCACTaGTCTAGTGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTIRPSAH*SSGQPG
Trigger: CCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTTGTTGGTTTAGAAGATaGAGTATCTTCAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTCWFRR*SIFNLA
Trigger: AGCCAGATTGAAGATACTCCATCTTCTAAACCAACA...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000395734.7
CDS-3UTR CCA 90 bp GGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATGGGAGGAGGGAAGGGAGAAAGTTGGTATCTTCTaGCCAGTTCTGGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: GTSACRSQSAVTWEEGREKVGIF*PVLAIW
Trigger: CCAAATAGCCAGAACTGGCCAGAAGATACCAACTTT...CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTGTTGGAAACAAAAGTTaGTATCTTCTGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPVGNKS*YLLASS
Trigger: AGAACTGGCCAGAAGATACCAACTTTTGTTTCCAAC...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTACCACTTGCTCAGGTTaGAAACAAAAGTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPTTCSG*KQKLVS
Trigger: AGATACCAACTTTTGTTTCCAACCTGAGCAAGTGGT...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp AGAGCACGCCACTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTGAAAGGCTCTGTTTCTTTAGATaGTGCCATGTCAGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: RARHLGHLPPTFGQRSERLCFFR*CHVSSL
Trigger: AAGACTACTGACATGGCACCATCTAAAGAAACAGAG...CCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395734.7
CDS-3UTR CCA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGATGGCTGCATGTCCTTaGCCAGTGTCACATCTAATT +
Preference number: 4 (lower is better)
Translates to: QRGWHKDISALFPLTLTEMAACP*PVSHLI
Trigger: AATTAGATGTGACACTGGCCAAGGACATGCAGCCAT...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCGTAATACCAAATCCTTaGCTGGGACTATCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLVIPNP*LGLSCF
Trigger: AAAACAAGATAGTCCCAGCCAAGGATTTGGTATTAC...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp AGAGCACGCCACTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTGAAAGGGTAGTGCTTTATCCTTaGTCAAGATCACGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RARHLGHLPPTFGQRSERVVLYP*SRSRWF
Trigger: AAACCAACGTGATCTTGACCAAGGATAAAGCACTAC...CCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGCGTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395734.7
CDS-3UTR CCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCCCACTTCTTTTACTGTaGACGGAGCCACATCCTTGG +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPPLLLL*TEPHPW
Trigger: CCAAGGATGTGGCTCCGTCCACAGTAAAAGAAGTGG...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTCCACTTCTTTTACTGTaGACGGAGCCACATCCTTGG +
Preference number: 4 (lower is better)
Translates to: PLSSQGIREADSLSLMPFPLLLL*TEPHPW
Trigger: CCAAGGATGTGGCTCCGTCCACAGTAAAAGAAGTGG...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCTTCTGTTTTGAGGGCTaGGACCTGATCCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPFCFEG*DLILSQ
Trigger: CTGACTGAGGATCAGGTCCCAGCCCTCAAAACAGAA...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GCCACTTGGGCCACCTACCCCCAACCTTTGGCCAAAGGAGTGAAAGGACCTGGATTCCATGTCTTTAATTaGAACTGGTGTTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ATWATYPQPLAKGVKGPGFHVFN*NWCCLC
Trigger: ACAGAGGCAACACCAGTTCCAATTAAAGACATGGAA...TCCAGGTCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGTGGCCCAAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395734.7
CDS-3UTR CCA 90 bp GTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGAATGATTTGGAAATCTaGGCTGGGGCTATCTCTTGC +
Preference number: 4 (lower is better)
Translates to: VSWCVLGELGTWCQTSTRNDLEI*AGAISC
Trigger: GCAAGAGATAGCCCCAGCCCAGATTTCCAAATCATT...CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp AAGTCTGGGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCCTGCTTCATTTTTCATaGAATCAGCAAGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: KSGAASSEANLHCSQSPSLLHFS*NQQAQL
Trigger: AAGCTGAGCTTGCTGATTCCATGAAAAATGAAGCAG...GGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp AAGTCTGGGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCTGTCTCTCTTGTTCCTaGATTGTAGACTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: KSGAASSEANLHCSQSPSCLSCS*IVDFGK
Trigger: TTTGCCAAAGTCTACAATCCAGGAACAAGAGAGACA...GGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TCTGACCACTCCTGTTGTCTACCTAGAGAGCACGCCACTTGGGCCACCTACCCCTGTCTCTCTTGTTCCTaGATTGTAGACTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SDHSCCLPREHATWATYPCLSCS*IVDFGK
Trigger: TTTGCCAAAGTCTACAATCCAGGAACAAGAGAGACA...GGGGTAGGTGGCCCAAGTGGCGTGCTCTCTAGGTAGACAACAGGAGTGGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429422.5
CDS-3UTR CCA 90 bp ACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCTTTCTTCCTGGAAGTGTTCTGCACATaGTCTCTACGGAGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: TTQPCFLPTFIPAGPFFLEVFCT*SLRRKA
Trigger: AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTC...CAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGGAAGTGTTCTGCACATaGTCTCTACGGAGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRREVFCT*SLRRKA
Trigger: AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTC...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTGCATTCAAATGTTCCTaGGTGAACACCATAGTGATT +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPAFKCS*VNTIVI
Trigger: AATCACTATGGTGTTCACCCAGGAACATTTGAATGC...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCGACTCAAGTCAGCAGTaGGCTTCTTGGGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCDSSQQ*ASWAGA
Trigger: CGCTCCTGCCCAAGAAGCCCACTGCTGACTTGAGTC...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCTCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCTGTAGAAGAGGGAATGCTTCCTAAATTCCGGAAGTCGCTGCAAGGATTCAGTATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACC +
Preference number: 4 (lower is better)
Translates to: PVEEGMLPKFRKSLQGFSMHLQD*GQPFCT
Trigger: GGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCAT...ACTGAATCCTTGCAGCGACTTCCGGAATTTAGGAAGCATTCCCTCTTCTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACATTTATTTATCAGCTCTaGTGGTGTTCTGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTFIYQL*WCSGTG
Trigger: ACCTGTCCCAGAACACCATCAGAGCTGATAAATAAA...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp CTGGAACCTGTCGTCAACCTCAGCATCCTCATGACCCCAGGACAGACGCAGTGGTTAAATTTCCAGACCTaGTTTCCTACTATCTGCATG +
Preference number: 4 (lower is better)
Translates to: LEPVVNLSILMTPGQTQWLNFQT*FPTICM
Trigger: CATGCAGATAGTAGGAAATCAGGTCTGGAAATTTAA...CCACTGCGTCTGTCCTGGGGTCATGAGGATGCTGAGGTTGACGACAGGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR TCA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTTTAAATTTCCAGACCTaGTTTCCTACTATCTGCATG +
Preference number: 4 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPLNFQT*FPTICM
Trigger: CATGCAGATAGTAGGAAATCAGGTCTGGAAATTTAA...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAACCTCTGGGGTTCAAGTaGGTCAACATGAATACTTTT +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEPLGFK*VNMNTF
Trigger: AAAAGTATTCATGTTGACTCACTTGAACCCCAGAGG...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCAGGCAGGAGAACCACTTaGACCTGGGAGGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GFRSITMLRKDHWSGVAAGRRTT*TWEAEG
Trigger: ACCCTCTGCCTCCCAGGTTCAAGTGGTTCTCCTGCC...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGCATCTTCTTGACTTCTaGAGGTTTTCCCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QRGWHKDISALFPLTLTEHLLDF*RFSLSL
Trigger: AAGACTGAGGGAAAACCTGCAGAAGTCAAGAAGATG...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGACATCTTCTTGACTTCTaGAGGTTTTCCCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSEANLHCSQSPSREALGHLLDF*RFSLSL
Trigger: AAGACTGAGGGAAAACCTGCAGAAGTCAAGAAGATG...TCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAAAGCTGGTACAGACTTTaGAGTCATCTTCTTGACTTC +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLESWYRL*SHLLDF
Trigger: GAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCT...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGCCACCTCCAGGGACATaGTTAATATTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRPPPGT*LILSLE
Trigger: TTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCGATTCCATGGATGGCTaGATGTCCTTGGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: MRIESGSPLLDPNLASTTDSMDG*MSLASV
Trigger: GACACTGGCCAAGGACATGCAGCCATCCATGGAATC...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp AGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTAATCCTTAGCCAGGGGTaGTTCTGTTTTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RTASLHMEIKSKLRSRPLILSQG*FCFEGW
Trigger: CCAGCCCTCAAAACAGAAGCACCCCTGGCTAAGGAT...TAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTAGGAGCCTTTGCATCTaGAATGGGCTTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKARSLCI*NGLWLH
Trigger: GTGAAGCCAAAGCCCATTGCAGATGCAAAGGCTCCT...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TCAGGCCCAGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAACAGCAGAAGTGTTCTaGACATGGTCTCTACGGAGG +
Preference number: 4 (lower is better)
Translates to: SGPGQPPCTWRSNLNLGQTAEVF*TWSLRR
Trigger: CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGT...TTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TGCACTTTGTGTTCACAAAGGGAAATGAGGCTCCATCAAACCCTGCAGAGCACACCTGACCAGTCTGGCTaGCTCACCATTGAGATACTG +
Preference number: 4 (lower is better)
Translates to: CTLCSQREMRLHQTLQSTPDQSG*LTIEIL
Trigger: CAGTATCTCAATGGTGAGGCAGCCAGACTGGTCAGG...TGTGCTCTGCAGGGTTTGATGGAGCCTCATTTCCCTTTGTGAACACAAAGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAGGGCAGAAGCTGGCTTaGATGGTGAGGCCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: KKMRIESGSPLLDPNLASGQKLA*MVRPAS
Trigger: AGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCC...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATGGGAGGAGGGAAGGGAGGCAGTACCACATTCTTaGCTGAAGATACATCTGTTT +
Preference number: 4 (lower is better)
Translates to: GTSACRSQSAVTWEEGREAVPHS*LKIHLF
Trigger: AAACAGATGTATCTTCAGCCAAGAATGTGGTACTGC...CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCGTAGTGCTTTATCCTTaGTCAAGATCACGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSVVLYP*SRSRWF
Trigger: AAACCAACGTGATCTTGACCAAGGATAAAGCACTAC...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCTGGAACATCTTTGGCTaGAGTCACATTGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPWNIFG*SHIVGQ
Trigger: CTGGCCAACAATGTGACTCCAGCCAAAGATGTTCCA...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTGTGGTGGAACATCTTTaGCTGGAGTCACATTGTTGG +
Preference number: 4 (lower is better)
Translates to: PLSSQGIREADSLSLMPFVVEHL*LESHCW
Trigger: CCAACAATGTGACTCCAGCCAAAGATGTTCCACCAC...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATGGGAGGAGGGAAGGGAGTTCCATGTCTTTAATTaGAACTGGTGTTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GTSACRSQSAVTWEEGREFHVFN*NWCCLC
Trigger: ACAGAGGCAACACCAGTTCCAATTAAAGACATGGAA...CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAAGTGGGCTGTGTTTTaGCTTTCGATGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTKWAVF*LSMLKS
Trigger: AGACTTCAACATCGAAAGCCAAAACACAGCCCACTT...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCATGTCAGTTTCTTTTaGGTTTGGACCAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSHVSFF*VWTKEP
Trigger: TGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATG...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCCTTATCTTTGGGTTCTaGGAGTCGAACACCCTTGGA +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPLIFGF*ESNTLG
Trigger: TCCAAGGGTGTTCGACTCCCAGAACCCAAAGATAAG...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAACCAAAATCTTATCTTTaGGTTCTGGGAGTCGAACAC +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEPKSYL*VLGVEH
Trigger: GTGTTCGACTCCCAGAACCCAAAGATAAGATTTTGG...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAAGTTACAACAGAATCATaGACTGACACAGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEVTTES*TDTGNG
Trigger: GCCATTACCTGTGTCAGTCCATGATTCTGTTGTAAC...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACATGTGTCAGCTGCAAATaGATGACCTTTAGGCTTATC +
Preference number: 4 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTCVSCK*MTFRLI
Trigger: GATAAGCCTAAAGGTCATCCATTTGCAGCTGACACA...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CTCCAGAGAAGCCCTTGGAATCTCCCAGGCCATTTCACTACAAACTTATGTTTGCCCATAGTGGTAGGCTaGCTGGGGAGAACACCTGAT +
Preference number: 4 (lower is better)
Translates to: LQRSPWNLPGHFTTNLCLPIVVG*LGRTPD
Trigger: ATCAGGTGTTCTCCCCAGCCAGCCTACCACTATGGG...CAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp GGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATGGGAGGAGGGAAGGGAGCTGCAGTGTATCTATTaGCTGCATCTGTCTTATTCT +
Preference number: 4 (lower is better)
Translates to: GTSACRSQSAVTWEEGRELQCIY*LHLSYS
Trigger: AGAATAAGACAGATGCAGCCAATAGATACACTGCAG...CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CCTGTAGAAGAGGGAATGCTTCCTAAATTCCGGAAGTCGCTGCAAGGATTCAGTGAAAGATCACTGGTCTaGTGTTGCAGCAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PVEEGMLPKFRKSLQGFSERSLV*CCSSPS
Trigger: ACTGGGGCTGCTGCAACACCAGACCAGTGATCTTTC...ACTGAATCCTTGCAGCGACTTCCGGAATTTAGGAAGCATTCCCTCTTCTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR CAA 72 bp ATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTaGGAATCTCCCAGGCCATTTCACTACAAACTTATG +
Preference number: 4 (lower is better)
Translates to: IYTAANPPPEKP*ESPRPFHYKLM
Trigger: CATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp AAATTTCCAGACCTGATTTCCTACTATCTGCATGAGGCTCCCTTGGACATGAGGCTCCAGGCTGATGCTTaGTGTTTTCCGTGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: KFPDLISYYLHEAPLDMRLQADA*CFPWSQ
Trigger: TTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAG...CCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTGGAGCAGTGGCGCAGTaGTGGGGCAAGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTIGAVAQ*WGKTKA
Trigger: TGCTTTGGTCTTGCCCCATCACTGCGCCACTGCTCC...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CCTGTAGAAGAGGGAATGCTTCCTAAATTCCGGAAGTCGCTGCAAGGATTCAGTCCTCTAGTGTGGCAATaGAGTCCCGCTTTATCTCTC +
Preference number: 4 (lower is better)
Translates to: PVEEGMLPKFRKSLQGFSPLVWQ*SPALSL
Trigger: GAGAGATAAAGCGGGACTTCATTGCCACACTAGAGG...ACTGAATCCTTGCAGCGACTTCCGGAATTTAGGAAGCATTCCCTCTTCTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCGGATATTTCTGTGGATaGTATAATGTCATTAGCCTG +
Preference number: 4 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSGYFCG*YNVISL
Trigger: CAGGCTAATGACATTATATCATCCACAGAAATATCC...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTTTTTCCCCGTTCCTGTaGCGGTTTCTGGTGAAATCA +
Preference number: 4 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKAFSPFL*RFLVKS
Trigger: TGATTTCACCAGAAACCGTCACAGGAACGGGGAAAA...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCGCTCTCAAGGTGACCTaGGGCTTCTTGACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCALKVT*GFLTVL
Trigger: AAGGACTGTCAAGAAGCCTCAGGTCACCTTGAGAGC...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGCGGAGTTGCTTCCCTTaGGCCCAGAGAGCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILRSCFP*AQRALS
Trigger: GCTCAAGGCTCTCTGGGCTCAAGGGAAGCAACTCCG...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTATTGAGAGGGCCTACTaGCTGGCTTTTATCTACAGG +
Preference number: 4 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKAIERAY*LAFIYR
Trigger: CCTGTAGATAAAAGCCAGTCAGTAGGCCCTCTCAAT...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp TGCAGTACTGGTGGCCTCAACCCCTTTATGAAAACACATGTTCTCATTTGGTGTTGGCTGCCTCACCATTaGGATACTGGACCACTTGGG +
Preference number: 4 (lower is better)
Translates to: CSTGGLNPFMKTHVLIWCWLPHH*DTGPLG
Trigger: CCCAAGTGGTCCAGTATCTCAATGGTGAGGCAGCCA...ACACCAAATGAGAACATGTGTTTTCATAAAGGGGTTGAGGCCACCAGTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCATCAACAAAGCAGCCCTaGCCAGTCTGGCTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: GFRSITMLRKDHWSGVAASTKQP*PVWLPH
Trigger: GTGAGGCAGCCAGACTGGTCAGGGCTGCTTTGTTGA...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp AAATCTAAACTTAGGTCAAGACCCCTACCTTCTCCAGGGATGCCAGGACCAGAGGTGGAGTCACATCCTTaGCCAGAGCCATTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: KSKLRSRPLPSPGMPGPEVESHP*PEPFLF
Trigger: AAACAGAAATGGCTCTGGGCAAGGATGTGACTCCAC...CTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCCAGAAGGTTGACTGTTaGATGGTTTCCTTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPQKVDC*MVSFPL
Trigger: TAGGGGAAAGGAAACCATGCAACAGTCAACCTTCTG...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTACAGAGGAGCCTCGCTaGCACCGCCCTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTITEEPR*HRPQSS
Trigger: TGAAGACTGAGGGCGGTGGCAGCGAGGCTCCTCTGT...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp TGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGACATGGCTTCAACCTaGAGAACTATTTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: WGARDMVSNLHKALLPQKDMAST*RTILPV
Trigger: AACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTC...TTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp GTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGGAGGAGCTTCGACTTTaGTATGTAAGAAATCTGACT +
Preference number: 4 (lower is better)
Translates to: VSWCVLGELGTWCQTSTREELRL*YVRNLT
Trigger: AGTCAGATTTCTTACATAGCAAAGTCGAAGCTCCTC...CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCCGATCACACAGAGCTTaGAGTGACATCACACCAATT +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPRSHRA*SDITPI
Trigger: AATTGGTGTGATGTCACTGCAAGCTCTGTGTGATCG...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCTTCAGGGTACTTATCTaGAAGGTTGACAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: MRIESGSPLLDPNLASTTFRVLI*KVDSWG
Trigger: CCCCCAGCTGTCAACCTTGCAGATAAGTACCCTGAA...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR GCA 90 bp AAGCAGGTTGTTTGCTCAGGCATCAGCAGAAATAGGCCCCGAAGAACTACCCTCAGGAAGCAGGTTGTTTaGTCAGGCATCAGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: KQVVCSGISRNRPRRTTLRKQVV*SGISRN
Trigger: ATTTCTGCTGATGCCTGAGCAAACAACCTGCTTCCT...GAGGGTAGTTCTTCGGGGCCTATTTCTGCTGATGCCTGAGCAAACAACCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTCCTCCACGGAGCAGTaGCGCAGTGATGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTISSTEQ*RSDGAR
Trigger: TCTTGCCCCATCACTGCGCCACTGCTCCGTGGAGGA...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TTCTTCCTGCTGACAAAACACTGGCTCCCTCATGTTCTTGGCACAGCAGAAGTGTCTTCTGGCCAGTTCTaGCTATTTGGGTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: FFLLTKHWLPHVLGTAEVSSGQF*LFGYSW
Trigger: CCAGGAATACCCAAATAGCCAGAACTGGCCAGAAGA...CACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp TCAGGCCCAGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAATATCAGCTGTCGCACTaGAGGGAAAGACCAAATCTG +
Preference number: 4 (lower is better)
Translates to: SGPGQPPCTWRSNLNLGQYQLSH*RERPNL
Trigger: CAGATTTGGTCTTTCCCTCCAGTGCGACAGCTGATA...TTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GTGTCTCCTGACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCTACCAAATCCTTGGCTaGGACTATCTTGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VSPDYATLFPSHFHPSRPYQILG*DYLVFF
Trigger: AAAGAAAACAAGATAGTCCCAGCCAAGGATTTGGTA...GGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395734.7
CDS-3UTR CCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCCTGGAGTCACATTGTTaGCCAGGGTCAGAACCCCAT +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCLESHC*PGSEPH
Trigger: ATGGGGTTCTGACCCTGGCCAACAATGTGACTCCAG...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAATGGTGGTGGGAGCTaGCTGCTTAGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCNGGGS*LLRERS
Trigger: ACTTCTCTCCCTAAGCAGCCAGCTCCCACCACCATT...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAACATGTCAGTTTCTTTTaGGTTTGGACCAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEHVSFF*VWTKEP
Trigger: TGGTTCTTTGGTCCAAACCCAAAAGAAACTGACATG...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACATGTAAGAAATCTGACTaGATTTCTGGTGTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTCKKSD*ISGVGK
Trigger: CTTGCCAACACCAGAAATCCAGTCAGATTTCTTACA...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGCATGTAGCCTTTCATTaGTTCTGCCATTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: QRGWHKDISALFPLTLTEHVAFH*FCHSAF
Trigger: AAAAGCAGAATGGCAGAACCAATGAAAGGCTACATG...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGAACTTATTGCAGTTTTaGGGGCTTCTTCAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: QRGWHKDISALFPLTLTENLLQF*GLLQKD
Trigger: ATCCTTCTGAAGAAGCCCCCAAAACTGCAATAAGTT...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp TGCACTTTGTGTTCACAAAGGGAAATGAGGCTCCATCAAACCCTGCAGAGCACATCGCTGCAGTACTGGTaGCCTCAACCCCTTTATGAA +
Preference number: 4 (lower is better)
Translates to: CTLCSQREMRLHQTLQSTSLQYW*PQPLYE
Trigger: TTCATAAAGGGGTTGAGGCCACCAGTACTGCAGCGA...TGTGCTCTGCAGGGTTTGATGGAGCCTCATTTCCCTTTGTGAACACAAAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR CAA 72 bp CAGTCTGGCTGCCTCACCATTGAGATACTGGACCACTaGGGTGTGACCACTATGGCAATACAGCATTTCATT +
Preference number: 4 (lower is better)
Translates to: QSGCLTIEILDH*GVTTMAIQHFI
Trigger: AATGAAATGCTGTATTGCCATAGTGGTCACACCCAAGTGGTCCAGTATCTCAATGGTGAGGCAGCCAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp TGCAGTACTGGTGGCCTCAACCCCTTTATGAAAACACATGTTCTCATTTGGTGTATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACC +
Preference number: 4 (lower is better)
Translates to: CSTGGLNPFMKTHVLIWCMHLQD*GQPFCT
Trigger: GGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCAT...ACACCAAATGAGAACATGTGTTTTCATAAAGGGGTTGAGGCCACCAGTACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp TGCAGTACTGGTGGCCTCAACCCCTTTATGAAAACACATGTTCTCATTTGGTGTCTCCCTTCTACTCCATaGCCACCATTGGCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: CSTGGLNPFMKTHVLIWCLPSTP*PPLARS
Trigger: ACTCCTAGCCAATGGTGGTCATGGAGTAGAAGGGAG...ACACCAAATGAGAACATGTGTTTTCATAAAGGGGTTGAGGCCACCAGTACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCATGGCTGCCTCACCATTaGGATACTGGACCACTTGGG +
Preference number: 4 (lower is better)
Translates to: GFRSITMLRKDHWSGVAAWLPHH*DTGPLG
Trigger: CCCAAGTGGTCCAGTATCTCAATGGTGAGGCAGCCA...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp ACTGTACACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGTCAACAAAGCAGCCCTaGCCAGTCTGGCTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: TVHQRERVVFSLMVYSLWSTKQP*PVWLPH
Trigger: GTGAGGCAGCCAGACTGGTCAGGGCTGCTTTGTTGA...CCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTGTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp AAGCAGGTTGTTTGCTCAGGCATCAGCAGAAATAGGCCCCGAAGAACTACCCTCGCTTGTGTTCAGTCCTaGCTAAATGCATTTTGGATC +
Preference number: 4 (lower is better)
Translates to: KQVVCSGISRNRPRRTTLACVQS*LNAFWI
Trigger: GATCCAAAATGCATTTAGTCAGGACTGAACACAAGC...GAGGGTAGTTCTTCGGGGCCTATTTCTGCTGATGCCTGAGCAAACAACCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434267.5
CDS-3UTR GCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCTTGCAACAGTCTGAGTaGTCTTGGACCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCLQQSE*SWTQIW
Trigger: CCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAA...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGCAAGAGTCACTGGTCTGGTGTTaGAGCAGCCCCAGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: HQRERVVFSLMVYSLWQESLVWC*SSPSVE
Trigger: CTCAACACTGGGGCTGCTGCAACACCAGACCAGTGA...CTCTTGCCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCATCACTGGTCTGGTGTTaGAGCAGCCCCAGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: GFRSITMLRKDHWSGVAASLVWC*SSPSVE
Trigger: CTCAACACTGGGGCTGCTGCAACACCAGACCAGTGA...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp TGCACTTTGTGTTCACAAAGGGAAATGAGGCTCCATCAAACCCTGCAGAGCACAGAAAAGGAAATTCGCTaGAGTACTGGTGGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: CTLCSQREMRLHQTLQSTEKEIR*STGGLN
Trigger: GTTGAGGCCACCAGTACTGCAGCGAATTTCCTTTTC...TGTGCTCTGCAGGGTTTGATGGAGCCTCATTTCCCTTTGTGAACACAAAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp CAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACCTTTTTTCTTCATGGAACTaGTGGAGGTGCTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: QPPCTWRSNLNLGQDPYLFSSWN*WRCSLG
Trigger: GCCCAAAGAGCACCTCCACCAGTTCCATGAAGAAAA...AAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGTGCAGAGATTCTAAATaGGAATCCTCACTTATTCCT +
Preference number: 4 (lower is better)
Translates to: VSWCVLGELGTWCQTSTRCRDSK*ESSLIP
Trigger: AGGAATAAGTGAGGATTCCCATTTAGAATCTCTGCA...CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACCTTCCTTTGCATCTGCAATaGGCTTTGGCTTCACGTCTT +
Preference number: 4 (lower is better)
Translates to: QPPCTWRSNLNLGQDPYLPLHLQ*ALASRL
Trigger: AAGACGTGAAGCCAAAGCCCATTGCAGATGCAAAGG...AAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGATCCTCCAGCGGGGGTaGCATAAGGATATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILILQRG*HKDISA
Trigger: GGCGGAGATATCCTTATGCCACCCCCGCTGGAGGAT...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGCATGTAGCCTTTCATTaGTTCTGCCATTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRHVAFH*FCHSAF
Trigger: AAAAGCAGAATGGCAGAACCAATGAAAGGCTACATG...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACCTTAGGAATTCCATCTCCTaGCCCTTTCTTGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QPPCTWRSNLNLGQDPYLRNSIS*PFLVLQ
Trigger: CTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCT...AAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACCTTCTCCAGGAAGTGTTCTGCACATaGTCTCTACGGAGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PCTWRSNLNLGQDPYLLQEVFCT*SLRRKA
Trigger: AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTC...CTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CTCCAGAGAAGCCCTTGGAATCTCCCAGGCCATTTCACTACAAACTTATGTTTGGCTCCCTCATGTTCTTaGCACAGCAGAAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LQRSPWNLPGHFTTNLCLAPSCS*HSRSVL
Trigger: CAGAACACTTCTGCTGTGCCAAGAACATGAGGGAGC...CAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TGCACTTTGTGTTCACAAAGGGAAATGAGGCTCCATCAAACCCTGCAGAGCACAAATTCGCTGCAGTACTaGTGGCCTCAACCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: CTLCSQREMRLHQTLQSTNSLQY*WPQPLY
Trigger: ATAAAGGGGTTGAGGCCACCAGTACTGCAGCGAATT...TGTGCTCTGCAGGGTTTGATGGAGCCTCATTTCCCTTTGTGAACACAAAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp AAATTTCCAGACCTGATTTCCTACTATCTGCATGAGGCTCCCTTGGACATGAGGGTTTTTGCAACAGTCTaGGTGCTCTTGGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: KFPDLISYYLHEAPLDMRVFATV*VLLDPD
Trigger: ATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAAC...CCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR TCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTTTGTCCTGCAAATATTaGAGTATCAGCTGTCGCACT +
Preference number: 4 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKALSCKY*SISCRT
Trigger: AGTGCGACAGCTGATACTTCAATATTTGCAGGACAA...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR TCA 90 bp TGCAGTACTGGTGGCCTCAACCCCTTTATGAAAACACATGTTCTCATTTGGTGTGTTCACAAAGGGAAATaGGGCTCCATCAAACCCTGC +
Preference number: 4 (lower is better)
Translates to: CSTGGLNPFMKTHVLIWCVHKGK*GSIKPC
Trigger: GCAGGGTTTGATGGAGCCTCATTTCCCTTTGTGAAC...ACACCAAATGAGAACATGTGTTTTCATAAAGGGGTTGAGGCCACCAGTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp CACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGCAAGAGAGAATCCAGCCCTTGTaGCCAGACCCCTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: HQRERVVFSLMVYSLWQERIQPL*PDPCRR
Trigger: TCTTCTACAGGGGTCTGGTCACAAGGGCTGGATTCT...CTCTTGCCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCATGGACCACTTGGGTGTaGCCACTATGGCAATACAGC +
Preference number: 4 (lower is better)
Translates to: GFRSITMLRKDHWSGVAAWTTWV*PLWQYS
Trigger: GCTGTATTGCCATAGTGGTCACACCCAAGTGGTCCA...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGCGCAGGCCGATCGACTaGCTTCGCTGTTCTATGATG +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILRRPID*LRCSMM
Trigger: CATCATAGAACAGCGAAGGCAGTCGATCGGCCTGCG...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR GCA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCATCATTATTTCCAATaGTTGTGCTGGTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: MRIESGSPLLDPNLASTTHHYFQ*LCWWPL
Trigger: GAGAGGCCACCAGCACAAGCATTGGAAATAATGATG...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp TCAGGCCCAGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAACATATCTTTAGCCAATaGCACCTCGGTTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: SGPGQPPCTWRSNLNLGQHIFSQ*HLGFCS
Trigger: GCTACAAAAACCGAGGTGGCATTGGCTAAAGATATG...TTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAATCCTTAGCCAGGGGTaGTTCTGTTTTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KKMRIESGSPLLDPNLASILSQG*FCFEGW
Trigger: CCAGCCCTCAAAACAGAAGCACCCCTGGCTAAGGAT...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp AAATTTCCAGACCTGATTTCCTACTATCTGCATGAGGCTCCCTTGGACATGAGGGATTCTCCTATCACATaGCCTTCATCGATCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KFPDLISYYLHEAPLDMRDSPIT*PSSIPA
Trigger: AGCAGGGATCGATGAAGGGCATGTGATAGGAGAATC...CCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCATTCTTCTCTCTTCTTaGCCACTGGTTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: MRIESGSPLLDPNLASTTILLSS*PLVPHR
Trigger: TCTGTGAGGAACCAGTGGCCAAGAAGAGAGAAGAAT...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCATTCCTTCTTCTGGCCTaGCTATTCCATCACGTGGGG +
Preference number: 4 (lower is better)
Translates to: KKMRIESGSPLLDPNLASFLLLA*LFHHVG
Trigger: CCCCACGTGATGGAATAGCCAGGCCAGAAGAAGGAA...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTCAGTCTGAGTGCTCTTaGACCCAGATCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTIQSECS*TQIWRL
Trigger: CAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTG...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCTGGTGGTTTTCTTCATaGAACTGGTGGAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCWWFSS*NWWRCS
Trigger: AGAGCACCTCCACCAGTTCCATGAAGAAAACCACCA...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp GTACACAACGGAAAGTCATACCCAGGCTTCTCCACCCATAACTTAGACAGCTACGGAGTATCTTCAATCTaGCTAGTTTCTGAGCACGGT +
Preference number: 4 (lower is better)
Translates to: VHNGKSYPGFSTHNLDSYGVSSI*LVSEHG
Trigger: ACCGTGCTCAGAAACTAGCCAGATTGAAGATACTCC...GTAGCTGTCTAAGTTATGGGTGGAGAAGCCTGGGTATGACTTTCCGTTGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp AGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTAATGGCTGCATGTCCTTaGCCAGTGTCACATCTAATT +
Preference number: 4 (lower is better)
Translates to: RTASLHMEIKSKLRSRPLMAACP*PVSHLI
Trigger: AATTAGATGTGACACTGGCCAAGGACATGCAGCCAT...TAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCTTCCATGTCTTTAATTaGAACTGGTGTTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPFHVFN*NWCCLC
Trigger: ACAGAGGCAACACCAGTTCCAATTAAAGACATGGAA...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACCTTTCTTTGCAGGTTGAGTaGTGGCCAAAGGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: QPPCTWRSNLNLGQDPYLSLQVE*WPKALF
Trigger: AAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGA...AAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp TCAGGCCCAGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAACTGGATTGTAGACTTTaGCAAAAGTGGAGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: SGPGQPPCTWRSNLNLGQLDCRL*QKWSKS
Trigger: GGACTTACTCCACTTTTGCCAAAGTCTACAATCCAG...TTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAGATGAAAAGAAAGGCTaGCAGGGTGTGGGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: KKMRIESGSPLLDPNLASDEKKG*QGVGVV
Trigger: CACTACCCCCACACCCTGCCAGCCTTTCTTTTCATC...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGACAGGAGTCTTCAGGTaGGGTGCAGGCTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILTGVFR*GAGCGL
Trigger: CAAACCACAGCCTGCACCCCACCTGAAGACTCCTGT...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp CACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGCAAGAGGAAAGATCACTGGTCTaGTGTTGCAGCAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: HQRERVVFSLMVYSLWQEERSLV*CCSSPS
Trigger: ACTGGGGCTGCTGCAACACCAGACCAGTGATCTTTC...CTCTTGCCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTTGTATCTGGTGTATGTaGGAACGAAGAATCATGCAT +
Preference number: 4 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKACIWCM*ERRIMH
Trigger: ATGCATGATTCTTCGTTCTCACATACACCAGATACA...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp TGCACTTTGTGTTCACAAAGGGAAATGAGGCTCCATCAAACCCTGCAGAGCACAGGGTTGTGTTTTCTTTaGTGGTGTATTCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: CTLCSQREMRLHQTLQSTGLCFL*WCILYG
Trigger: GCCATAGAGAATACACCATCAAAGAAAACACAACCC...TGTGCTCTGCAGGGTTTGATGGAGCCTCATTTCCCTTTGTGAACACAAAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp ACTGTACACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGGGCTCCATCAAACCCTaGAGAGCACAAGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TVHQRERVVFSLMVYSLWGSIKP*RAQEEA
Trigger: TGCTTCCTCTTGTGCTCTGCAGGGTTTGATGGAGCC...CCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTGTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCAGCCATTCTGCACCACTaGAACTGCAGGAACTATCCA +
Preference number: 4 (lower is better)
Translates to: GFRSITMLRKDHWSGVAAAILHH*NCRNYP
Trigger: TGGATAGTTCCTGCAGTTGCAGTGGTGCAGAATGGC...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434267.5
CDS-3UTR CCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGTCTTCATGGAACTGGTaGAGGTGCTCTTTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILSSWNW*RCSLGD
Trigger: GTCGCCCAAAGAGCACCTCCACCAGTTCCATGAAGA...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCTTCAAGGAATTCAGTTaGAGACCCTGTAGTATCGCT +
Preference number: 4 (lower is better)
Translates to: MRIESGSPLLDPNLASTTFKEFS*RPCSIA
Trigger: AGCGATACTACAGGGTCTCCAACTGAATTCCTTGAA...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTGGTCAAGATCACGTTaGTTTCCGGGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTIWSRSR*FPGAVS
Trigger: TGACACTGCCCCCGGAAACCAACGTGATCTTGACCA...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGTGGTCAAGATCACGTTaGTTTCCGGGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILWSRSR*FPGAVS
Trigger: TGACACTGCCCCCGGAAACCAACGTGATCTTGACCA...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTCTGGAGTCACATTGTTaGCCAGGGTCAGAACCCCAT +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTILESHC*PGSEPH
Trigger: ATGGGGTTCTGACCCTGGCCAACAATGTGACTCCAG...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp AAATTTCCAGACCTGATTTCCTACTATCTGCATGAGGCTCCCTTGGACATGAGGTCTTTGCAGGTTGAGTaGTGGCCAAAGGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KFPDLISYYLHEAPLDMRSLQVE*WPKALF
Trigger: AAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGA...CCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp AAATCTAAACTTAGGTCAAGACCCCTACCTTCTCCAGGGATGCCAGGACCAGAGTTTCTCTTCATTCACTaGATGTGCTGGGAAATTACC +
Preference number: 4 (lower is better)
Translates to: KSKLRSRPLPSPGMPGPEFLFIH*MCWEIT
Trigger: GGTAATTTCCCAGCACATCCAGTGAATGAAGAGAAA...CTCTGGTCCTGGCATCCCTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR TCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGACACAGAGCTTGCAGTaGCATCACACCAATTCCCCA +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILTQSLQ*HHTNSP
Trigger: TGGGGAATTGGTGTGATGTCACTGCAAGCTCTGTGT...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp GTACACAACGGAAAGTCATACCCAGGCTTCTCCACCCATAACTTAGACAGCTACGCCTCAACCCCTTTATaGAAACACATGTTCTCATTT +
Preference number: 4 (lower is better)
Translates to: VHNGKSYPGFSTHNLDSYASTPL*KHMFSF
Trigger: AAATGAGAACATGTGTTTTCATAAAGGGGTTGAGGC...GTAGCTGTCTAAGTTATGGGTGGAGAAGCCTGGGTATGACTTTCCGTTGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp TTCCGGAAGTCGCTGCAAGGATTCAGTTTAAACTTTCATGATATTCTAATCTTAGGCGGGTGGATCACTTaGGATCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: FRKSLQGFSLNFHDILILGGWIT*DQEFET
Trigger: GGTCTCGAACTCCTGATCTCAAGTGATCCACCCGCC...TAAGATTAGAATATCATGAAAGTTTAAACTGAATCCTTGCAGCGACTTCCGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGTTGCAACAGTCTGAGTaGTCTTGGACCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILLQQSE*SWTQIW
Trigger: CCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAA...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCATAGGATCGACCACTTaGTCAGGTTGGAAACAAAAG +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCIGSTT*SGWKQK
Trigger: CTTTTGTTTCCAACCTGAGCAAGTGGTCGATCCTAT...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAGTACAACAGCTGTGTTaGAGGGAGACATACCGTAAC +
Preference number: 4 (lower is better)
Translates to: KKMRIESGSPLLDPNLASVQQLC*RETYRN
Trigger: GTTACGGTATGTCTCCCTGCAACACAGCTGTTGTAC...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCGACATGGCTTCAACCTaGAGAACTATTTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCDMAST*RTILPV
Trigger: AACTGGCAAAATAGTTCTGCAGGTTGAAGCCATGTC...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGACAGCAGAAGTGTTCTaGACATGGTCTCTACGGAGG +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILTAEVF*TWSLRR
Trigger: CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGT...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR GCA 90 bp CACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGCAAGAGGAAAAGGAAATTCGCTaGAGTACTGGTGGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: HQRERVVFSLMVYSLWQEEKEIR*STGGLN
Trigger: GTTGAGGCCACCAGTACTGCAGCGAATTTCCTTTTC...CTCTTGCCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp CTCCAGAGAAGCCCTTGGAATCTCCCAGGCCATTTCACTACAAACTTATGTTTGGCCAGGTCATCATCATaGTACATCTTAAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: LQRSPWNLPGHFTTNLCLARSSS*YILKGS
Trigger: TGATCCCTTTAAGATGTACCATGATGATGACCTGGC...CAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGTAATACCAAATCCTTaGCTGGGACTATCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKAVIPNP*LGLSCF
Trigger: AAAACAAGATAGTCCCAGCCAAGGATTTGGTATTAC...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTTGCAGAGATTCTAAATaGGAATCCTCACTTATTCCT +
Preference number: 4 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKACRDSK*ESSLIP
Trigger: AGGAATAAGTGAGGATTCCCATTTAGAATCTCTGCA...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAAGTGGGCTGTGTTTTaGCTTTCGATGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCKWAVF*LSMLKS
Trigger: AGACTTCAACATCGAAAGCCAAAACACAGCCCACTT...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGCTGTGCACTTGCAATTaGGCCGGCTGTTTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILLCTCN*AGCFSD
Trigger: GTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAG...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGCTGCTGACAAAACACTaGCTCCCTCATGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILLLTKH*LPHVLG
Trigger: GCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAG...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp ACTGTACACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGTCGCTGCAGTACTGGTaGCCTCAACCCCTTTATGAA +
Preference number: 4 (lower is better)
Translates to: TVHQRERVVFSLMVYSLWSLQYW*PQPLYE
Trigger: TTCATAAAGGGGTTGAGGCCACCAGTACTGCAGCGA...CCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTGTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCAAATTCGCTGCAGTACTaGTGGCCTCAACCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: GFRSITMLRKDHWSGVAANSLQY*WPQPLY
Trigger: ATAAAGGGGTTGAGGCCACCAGTACTGCAGCGAATT...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp TGCAGTACTGGTGGCCTCAACCCCTTTATGAAAACACATGTTCTCATTTGGTGTGACAGCTACAGGGACTaGTTACGAGCAATAGAAAGA +
Preference number: 4 (lower is better)
Translates to: CSTGGLNPFMKTHVLIWCDSYRD*LRAIER
Trigger: TCTTTCTATTGCTCGTAACCAGTCCCTGTAGCTGTC...ACACCAAATGAGAACATGTGTTTTCATAAAGGGGTTGAGGCCACCAGTACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp AAGCAGGTTGTTTGCTCAGGCATCAGCAGAAATAGGCCCCGAAGAACTACCCTCTACAGCATTTCATTATaGGACTGGCTACTTTGTATA +
Preference number: 4 (lower is better)
Translates to: KQVVCSGISRNRPRRTTLYSISL*DWLLCI
Trigger: TATACAAAGTAGCCAGTCCCATAATGAAATGCTGTA...GAGGGTAGTTCTTCGGGGCCTATTTCTGCTGATGCCTGAGCAAACAACCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTCTGCTGTTGCTGAAGTaGGCCAATTCTTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTILLLLK*ANSSLF
Trigger: GAAGAGAGAAGAATTGGCTCACTTCAGCAACAGCAG...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp GTGACCACTATGGCAATACAGCATTTCATTATGGGACTGGCTACTTTGTATAAACCTCTAGTGTGGCAATaGAGTCCCGCTTTATCTCTC +
Preference number: 4 (lower is better)
Translates to: VTTMAIQHFIMGLATLYKPLVWQ*SPALSL
Trigger: GAGAGATAAAGCGGGACTTCATTGCCACACTAGAGG...TTTATACAAAGTAGCCAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCACCACCTCCAGGGACATaGTTAATATTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KKMRIESGSPLLDPNLASPPPGT*LILSLE
Trigger: TTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
CDS-3UTR GCA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCACAGAAGGTTGACTGTTaGATGGTTTCCTTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: KKMRIESGSPLLDPNLASQKVDC*MVSFPL
Trigger: TAGGGGAAAGGAAACCATGCAACAGTCAACCTTCTG...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR GCA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCAAGGAAGCAGGTTGTTTaGTCAGGCATCAGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: GFRSITMLRKDHWSGVAARKQVV*SGISRN
Trigger: ATTTCTGCTGATGCCTGAGCAAACAACCTGCTTCCT...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGTGGTGGTTTTCTTCATaGAACTGGTGGAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILWWFSS*NWWRCS
Trigger: AGAGCACCTCCACCAGTTCCATGAAGAAAACCACCA...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CCTGTAGAAGAGGGAATGCTTCCTAAATTCCGGAAGTCGCTGCAAGGATTCAGTTGTTGGTTTAGAAGATaGAGTATCTTCAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: PVEEGMLPKFRKSLQGFSCWFRR*SIFNLA
Trigger: AGCCAGATTGAAGATACTCCATCTTCTAAACCAACA...ACTGAATCCTTGCAGCGACTTCCGGAATTTAGGAAGCATTCCCTCTTCTACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGCCAGTTCTGGCTATTTaGGTATTCCTGGTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILPVLAI*VFLVGH
Trigger: ATGGCCTACCAGGAATACCCAAATAGCCAGAACTGG...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACCTTCTCCAGGTGTCACATCTAATTTaGTGGGTGATTCCATATCTT +
Preference number: 4 (lower is better)
Translates to: PCTWRSNLNLGQDPYLLQVSHLI*WVIPYL
Trigger: AAGATATGGAATCACCCACCAAATTAGATGTGACAC...CTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAATGGCTGCATGTCCTTaGCCAGTGTCACATCTAATT +
Preference number: 4 (lower is better)
Translates to: KKMRIESGSPLLDPNLASMAACP*PVSHLI
Trigger: AATTAGATGTGACACTGGCCAAGGACATGCAGCCAT...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGGATCTGACTGGCTCTTaGTCTCTAGTCCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILDLTGS*SLVHSS
Trigger: GGAAGAATGGACTAGAGACCAAGAGCCAGTCAGATC...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp TTCCGGAAGTCGCTGCAAGGATTCAGTTTAAACTTTCATGATATTCTAATCTTACTCCCTTCTACTCCATaGCCACCATTGGCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: FRKSLQGFSLNFHDILILLPSTP*PPLARS
Trigger: ACTCCTAGCCAATGGTGGTCATGGAGTAGAAGGGAG...TAAGATTAGAATATCATGAAAGTTTAAACTGAATCCTTGCAGCGACTTCCGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCAGGGTTGTGTTTTCTTTaGTGGTGTATTCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: GFRSITMLRKDHWSGVAAGLCFL*WCILYG
Trigger: GCCATAGAGAATACACCATCAAAGAAAACACAACCC...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp CACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGCAAGAGGTCAATCATGAAGTGTaGGTGTACACAACGGAAAGT +
Preference number: 4 (lower is better)
Translates to: HQRERVVFSLMVYSLWQEVNHEV*VYTTES
Trigger: ACTTTCCGTTGTGTACACTCACACTTCATGATTGAC...CTCTTGCCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTACTTTCTCTACTGAATaGTTAGACGCACCACTGTGC +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTITFSTE*LDAPLC
Trigger: GCACAGTGGTGCGTCTAAGCATTCAGTAGAGAAAGT...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR GCA 90 bp TGCACTTTGTGTTCACAAAGGGAAATGAGGCTCCATCAAACCCTGCAGAGCACAGGGGTTATAAGAAGCTaGATAATCAGTAAAAGGATA +
Preference number: 4 (lower is better)
Translates to: CTLCSQREMRLHQTLQSTGVIRS*IISKRI
Trigger: TATCCTTTTACTGATTATGCAGCTTCTTATAACCCC...TGTGCTCTGCAGGGTTTGATGGAGCCTCATTTCCCTTTGTGAACACAAAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp CCTGTAGAAGAGGGAATGCTTCCTAAATTCCGGAAGTCGCTGCAAGGATTCAGTGGGGTTATAAGAAGCTaGATAATCAGTAAAAGGATA +
Preference number: 4 (lower is better)
Translates to: PVEEGMLPKFRKSLQGFSGVIRS*IISKRI
Trigger: TATCCTTTTACTGATTATGCAGCTTCTTATAACCCC...ACTGAATCCTTGCAGCGACTTCCGGAATTTAGGAAGCATTCCCTCTTCTACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCATCAGTCCTGACTAAATaGATTTTGGATCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: GFRSITMLRKDHWSGVAASVLTK*ILDQAP
Trigger: AGGTGCCTGATCCAAAATGCATTTAGTCAGGACTGA...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434267.5
CDS-3UTR CCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGTTGCAGGTTGAGTGGTaGCCAAAGGCTTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILLQVEW*PKALFS
Trigger: AGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAA...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGACTGATTTCTTTTaGGGAGTCCATTCGGCACTC +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTILTDFF*GVHSAL
Trigger: GAGTGCCGAATGGACTCCCCAAAAGAAATCAGTCAA...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR TCA 90 bp ACTGTACACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGAACTACTACCAGTTTTaGAAAGATCCCTGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: TVHQRERVVFSLMVYSLWNYYQF*KDPWRK
Trigger: CTTTCGCCAGGGATCTTTTCAAAACTGGTAGTAGTT...CCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTGTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp ACTGTACACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGGTCAATCATGAAGTGTaGGTGTACACAACGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TVHQRERVVFSLMVYSLWVNHEV*VYTTES
Trigger: ACTTTCCGTTGTGTACACTCACACTTCATGATTGAC...CCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTGTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR GCA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCATCACTAAAATCTTCCTaGCCTTTTTCCTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KKMRIESGSPLLDPNLASSLKSS*PFSLLL
Trigger: AAGCAGCAAGGAAAAAGGGCAGGAAGATTTTAGTGA...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CCA 90 bp GTGACCACTATGGCAATACAGCATTTCATTATGGGACTGGCTACTTTGTATAAAGGAGTATCTTCAATCTaGCTAGTTTCTGAGCACGGT +
Preference number: 4 (lower is better)
Translates to: VTTMAIQHFIMGLATLYKGVSSI*LVSEHG
Trigger: ACCGTGCTCAGAAACTAGCCAGATTGAAGATACTCC...TTTATACAAAGTAGCCAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGGCCAGGTCATCATCATaGTACATCTTAAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: TLTEDFHVDMASTCRTILARSSS*YILKGS
Trigger: TGATCCCTTTAAGATGTACCATGATGATGACCTGGC...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CTCCAGAGAAGCCCTTGGAATCTCCCAGGCCATTTCACTACAAACTTATGTTTGATTTCCTTGCTTTTATaGGGAATACTACCAGTATCT +
Preference number: 4 (lower is better)
Translates to: LQRSPWNLPGHFTTNLCLISLLL*GILPVS
Trigger: AGATACTGGTAGTATTCCCCATAAAAGCAAGGAAAT...CAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CCA 90 bp ACTGTACACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGAATACAAAAATTAGCTaGTGTGGTGGCGCACACCTA +
Preference number: 4 (lower is better)
Translates to: TVHQRERVVFSLMVYSLWNTKIS*CGGAHL
Trigger: TAGGTGTGCGCCACCACACCAGCTAATTTTTGTATT...CCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTGTACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp GTGACCACTATGGCAATACAGCATTTCATTATGGGACTGGCTACTTTGTATAAAGACAGCTACAGGGACTaGTTACGAGCAATAGAAAGA +
Preference number: 4 (lower is better)
Translates to: VTTMAIQHFIMGLATLYKDSYRD*LRAIER
Trigger: TCTTTCTATTGCTCGTAACCAGTCCCTGTAGCTGTC...TTTATACAAAGTAGCCAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp ACTGTACACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGGCCTCAACCCCTTTATaGAAACACATGTTCTCATTT +
Preference number: 4 (lower is better)
Translates to: TVHQRERVVFSLMVYSLWASTPL*KHMFSF
Trigger: AAATGAGAACATGTGTTTTCATAAAGGGGTTGAGGC...CCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTGTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCATACCAAATCCTTGGCTaGGACTATCTTGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KKMRIESGSPLLDPNLASYQILG*DYLVFF
Trigger: AAAGAAAACAAGATAGTCCCAGCCAAGGATTTGGTA...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTGTAATACCAAATCCTTaGCTGGGACTATCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LTLTEDFHVDMASTCRTIVIPNP*LGLSCF
Trigger: AAAACAAGATAGTCCCAGCCAAGGATTTGGTATTAC...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CCA 90 bp CACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGCAAGAGTACAGCATTTCATTATaGGACTGGCTACTTTGTATA +
Preference number: 4 (lower is better)
Translates to: HQRERVVFSLMVYSLWQEYSISL*DWLLCI
Trigger: TATACAAAGTAGCCAGTCCCATAATGAAATGCTGTA...CTCTTGCCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR TCA 90 bp TTCCGGAAGTCGCTGCAAGGATTCAGTTTAAACTTTCATGATATTCTAATCTTAAACTACTACCAGTTTTaGAAAGATCCCTGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: FRKSLQGFSLNFHDILILNYYQF*KDPWRK
Trigger: CTTTCGCCAGGGATCTTTTCAAAACTGGTAGTAGTT...TAAGATTAGAATATCATGAAAGTTTAAACTGAATCCTTGCAGCGACTTCCGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CCA 90 bp TTCCGGAAGTCGCTGCAAGGATTCAGTTTAAACTTTCATGATATTCTAATCTTATGTTGGTTTAGAAGATaGAGTATCTTCAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: FRKSLQGFSLNFHDILILCWFRR*SIFNLA
Trigger: AGCCAGATTGAAGATACTCCATCTTCTAAACCAACA...TAAGATTAGAATATCATGAAAGTTTAAACTGAATCCTTGCAGCGACTTCCGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
3UTR CAA 72 bp ATAACTGTACACCAAAGGGAAAGGGTTGTGTTTTCTTaGATGGTGTATTCTCTATGGCAAGAGAGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: ITVHQRERVVFS*MVYSLWQESFN
Trigger: ATTAAAACTCTCTTGCCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTGTACAGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS CCA 90 bp CTGCCGCCACGACGTCTCTGCAGAGCTGCCCGAGCCGCGGGCGGTTaGGGCGAGGTGCGCCTGGGGGCTCTAGCCTCCCGCCTGCGGCCT +
Preference number: 5 (lower is better)
Translates to: LPPRRLCRAARAAGG*GEVRLGALASRLRP
Trigger: AGGCCGCAGGCGGGAGGCTAGAGCCCCCAGGCGCACCTCGCCCCAACCGCCCGCGGCTCGGGCAGCTCTGCAGAGACGTCGTGGCGGCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000468075.2
CDS CCA 90 bp CGTGGCGAGGGGGAGGGCGGAGGGCTGTGGCGGACCAATGGGTGCTaGCCCTGCCGCCACGACGTCTCTGCAGAGCTGCCCGAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: RGEGEGGGLWRTNGC*PCRHDVSAELPEPR
Trigger: CCGCGGCTCGGGCAGCTCTGCAGAGACGTCGTGGCGGCAGGGCCAGCACCCATTGGTCCGCCACAGCCCTCCGCCCTCCCCCTCGCCACG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000468075.2
CDS GCA 90 bp GCTGTGGCGGACCAATGGGTGCTGGCCCTGCCGCCACGACGTCTCTaGAGAGCTGCCCGAGCCGCGGGCGGTTGGGGCGAGGTGCGCCTG +
Preference number: 5 (lower is better)
Translates to: AVADQWVLALPPRRL*RAARAAGGWGEVRL
Trigger: CAGGCGCACCTCGCCCCAACCGCCCGCGGCTCGGGCAGCTCTGCAGAGACGTCGTGGCGGCAGGGCCAGCACCCATTGGTCCGCCACAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000468075.2
CDS-3UTR CAA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGGGGGCAGAAGCTGGCTaGGATGGTGAGGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAGAEAG*DGEARF
Trigger: GAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCC...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: APGTQSRREGEPSGLPSTCGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPCGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCGGGGCAGAAGCTGGCTaGGATGGTGAGGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRGAEAG*DGEARF
Trigger: GAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCC...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCGGCATGGGTGTGGCCTaGACTCGGCTGGGAACCACC +
Preference number: 5 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRGMGVA*TRLGTT
Trigger: GGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCC...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGGGCATGGGTGTGGCCTaGACTCGGCTGGGAACCACC +
Preference number: 5 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGGMGVA*TRLGTT
Trigger: GGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCC...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCGCACTGACCCCCAACTaGGGGCAGGGCAGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSALTPN*GQGSKK
Trigger: CTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGC...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS GCA 90 bp CGAGGTGCGCCTGGGGGCTCTAGCCTCCCGCCTGCGGCCTGCGAATaGCGAAGCGGACCGCAGGCCGATCGACTGCCTTCGCTGTTCTAT +
Preference number: 5 (lower is better)
Translates to: RGAPGGSSLPPAACE*RSGPQADRLPSLFY
Trigger: ATAGAACAGCGAAGGCAGTCGATCGGCCTGCGGTCCGCTTCGGCATTCGCAGGCCGCAGGCGGGAGGCTAGAGCCCCCAGGCGCACCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000468075.2
CDS-3UTR CAA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCAGGGGCTCCTACTGCTaGGGCCAGTTGAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSRGSYC*GQLRQQ
Trigger: CTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCT...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGAGGGGCTCCTACTGCTaGGGCCAGTTGAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: PGTQSRREGEPSGLPSTARGSYC*GQLRQQ
Trigger: CTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCT...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGAGGGGCTCCTACTGCTaGGGCCAGTTGAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: PRARKAGGKASLAGCPARRGSYC*GQLRQQ
Trigger: CTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCT...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCCCAGCACGGCGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: AQHGAQALTGLVDSPGKGCGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...CCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAAGGGTGGGGTGGCCATaGAGGCCACTGGCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: GAGLLLPRARKAGGKASLRVGWP*RPLAEV
Trigger: CACTTCAGCCAGTGGCCTCAATGGCCACCCCACCCT...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGAGGGTGGGGTGGCCATaGAGGCCACTGGCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLRVGWP*RPLAEV
Trigger: CACTTCAGCCAGTGGCCTCAATGGCCACCCCACCCT...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCATCTCTCCCGGAGTaGCTTCCCTTGAGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAPSLPE*LPLSPE
Trigger: CTCTGGGCTCAAGGGAAGCAACTCCGGGAGAGATGG...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CAA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCACTTGGTGGGAGCTCCTaGTTCGGTGGGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: ARKAGGKASLAGCPARRPLGGSS*FGGVVM
Trigger: CATCACCACCCCACCGAACAAGGAGCTCCCACCAAG...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGTACTGCTTGGGCCAGTaGAGGCAACAGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PRARKAGGKASLAGCPARYCLGQ*RQQQQL
Trigger: CAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTA...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGTGGTGGAGGTGCTCTTaGGGCGACTCAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAWWRCS*GDSSQL
Trigger: CAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCA...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCCGGAGTTGCTTCCCTaGAGCCCAGAGAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGPELLP*SPESLE
Trigger: CTCAAGGCTCTCTGGGCTCAAGGGAAGCAACTCCGG...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGTGGTGGAGGTGCTCTTaGGGCGACTCAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLWWRCS*GDSSQL
Trigger: CAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCA...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCATGGTGGAGGTGCTCTTaGGGCGACTCAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: ARKAGGKASLAGCPARRPWWRCS*GDSSQL
Trigger: CAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCA...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGATGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGCGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGCTAAGGGAACTGCCGTaGGCTGAGGAGGTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: APGTQSRREGEPSGLPSTLRELP*AEEVLQ
Trigger: TTGCAGAACCTCCTCAGCCAACGGCAGTTCCCTTAG...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCTTGGTCAAGATCACGTaGGTTTCCGGGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSLVKIT*VSGGSV
Trigger: GACACTGCCCCCGGAAACCAACGTGATCTTGACCAA...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGGACGGAGCCACATCCTaGGCCGGGGCTATTTCTGTT +
Preference number: 5 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGDGATS*AGAISV
Trigger: AACAGAAATAGCCCCGGCCAAGGATGTGGCTCCGTC...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGCTGGAGTCACATTGTaGGCCAGGGTCAGAACCCCA +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLAGVTL*ARVRTP
Trigger: TGGGGTTCTGACCCTGGCCAACAATGTGACTCCAGC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGAGAGAGGCTGTCTGCTaGTCTGAGAGCGACATCGTC +
Preference number: 5 (lower is better)
Translates to: PRARKAGGKASLAGCPARREAVC*SESDIV
Trigger: GACGATGTCGCTCTCAGACAAGCAGACAGCCTCTCT...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS TCA 90 bp ATGCCGAAGCGGACCGCAGGCCGATCGACTGCCTTCGCTGTTCTATaGTGGCCGTCGCTCTCTCTCAGAGTCTGGGCGCCCGGAGCGAGG +
Preference number: 5 (lower is better)
Translates to: MPKRTAGRSTAFAVL*WPSLSLRVWAPGAR
Trigger: CCTCGCTCCGGGCGCCCAGACTCTGAGAGAGAGCGACGGCCATCATAGAACAGCGAAGGCAGTCGATCGGCCTGCGGTCCGCTTCGGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR CAA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGTTTTCTTCTCTGGGCTaGGTGGGAGCTCCTTGTTCG +
Preference number: 5 (lower is better)
Translates to: GGKASLAGCPARRPSAHWFSSLG*VGAPCS
Trigger: CGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAA...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGTTTTCTTCTCTGGGCTaGGTGGGAGCTCCTTGTTCG +
Preference number: 5 (lower is better)
Translates to: APGTQSRREGEPSGLPSTFSSLG*VGAPCS
Trigger: CGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAA...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCGCCGAGGTGGGCTTCTaGTCTATGAAAGGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSAEVGF*SMKGVV
Trigger: CACAACTCCTTTCATAGACAAGAAGCCCACCTCGGC...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCGCCGAGGTGGGCTTCTaGTCTATGAAAGGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPAEVGF*SMKGVV
Trigger: CACAACTCCTTTCATAGACAAGAAGCCCACCTCGGC...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGTCCGTGGAGCCAACCTaGGAGCGGACATTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGSVEPT*ERTFFR
Trigger: TCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGA...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCCTTAGACCCACACTaGGAGGAGACCTTAGAGATG +
Preference number: 5 (lower is better)
Translates to: APGTQSRREGEPSGLPSTALDPH*EETLEM
Trigger: CATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGC...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCACCAGGCTTGTGCTaGATGTTAGCCTTAGACCCA +
Preference number: 5 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAPPGLC*MLALDP
Trigger: TGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGG...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGCCAGTTCTGGCTATTaGGGTATTCCTGGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: PRARKAGGKASLAGCPARASSGY*GIPGRP
Trigger: TGGCCTACCAGGAATACCCAAATAGCCAGAACTGGC...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCTAAGGGAACTGCCGTaGGCTGAGGAGGTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLLRELP*AEEVLQ
Trigger: TTGCAGAACCTCCTCAGCCAACGGCAGTTCCCTTAG...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTATTGGTCAAGATCACGTaGGTTTCCGGGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: GAGLLLPRARKAGGKASLLVKIT*VSGGSV
Trigger: GACACTGCCCCCGGAAACCAACGTGATCTTGACCAA...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGGGTGGAGTCACATCCTaGCCCAGAGCCATTTCTGTT +
Preference number: 5 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAGGVTS*PRAISV
Trigger: AACAGAAATGGCTCTGGGCAAGGATGTGACTCCACC...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCATCTCCTGGCCCTTTCTaGTTCTCCAGCCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: ARKAGGKASLAGCPARRPSPGPF*FSSPGF
Trigger: AAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGA...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTACTGCATGAGGCTCCCTaGGACATGAGGGCTTACATG +
Preference number: 5 (lower is better)
Translates to: GAGLLLPRARKAGGKASLLHEAP*DMRAYM
Trigger: CATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAG...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCTGCATGAGGCTCCCTaGGACATGAGGGCTTACATG +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLLHEAP*DMRAYM
Trigger: CATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAG...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCGGCTCCCTCATGTTCTaGGCACAGCAGAAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPGSLMF*AQQKCS
Trigger: AGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCC...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS GCA 90 bp CGCCTGCGGCCTGCGAATGCCGAAGCGGACCGCAGGCCGATCGACTaGCTTCGCTGTTCTATGATGGCCGTCGCTCTCTCTCAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: RLRPANAEADRRPID*LRCSMMAVALSQSL
Trigger: CAGACTCTGAGAGAGAGCGACGGCCATCATAGAACAGCGAAGGCAGTCGATCGGCCTGCGGTCCGCTTCGGCATTCGCAGGCCGCAGGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS GCA 90 bp CCAGCAGCTCAGGAGGGACCCTGGCAGGCTTGGGCCGGGTTGACCTaGGGTCACTGGGTCTGCAAACTTGTTTGGCTTGTGTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: PAAQEGPWQAWAGLT*GHWVCKLVWLVWEG
Trigger: CCCCTCCCACACAAGCCAAACAAGTTTGCAGACCCAGTGACCGCAGGTCAACCCGGCCCAAGCCTGCCAGGGTCCCTCCTGAGCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp GAGTCTTCCATGGAGGAGAGCCTCCCAGCAGCTCAGGAGGGACCCTaGCAGGCTTGGGCCGGGTTGACCTGCGGTCACTGGGTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: ESSMEESLPAAQEGP*QAWAGLTCGHWVCK
Trigger: TTTGCAGACCCAGTGACCGCAGGTCAACCCGGCCCAAGCCTGCCAGGGTCCCTCCTGAGCTGCTGGGAGGCTCTCCTCCATGGAAGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS-3UTR CAA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGTCCTGCCCTTTTTCCTaGCTGCTTCCTTCAGGAATC +
Preference number: 5 (lower is better)
Translates to: PRARKAGGKASLAGCPARSCPFS*LLPSGI
Trigger: GATTCCTGAAGGAAGCAGCAAGGAAAAAGGGCAGGA...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CAA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGTTTTCTTCTCTGGGCTaGGTGGGAGCTCCTTGTTCG +
Preference number: 5 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGFSSLG*VGAPCS
Trigger: CGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAA...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCTACTGCTTGGGCCAGTaGAGGCAACAGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSYCLGQ*RQQQQL
Trigger: CAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTA...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGAAGGGGCTCCTACTGCTaGGGCCAGTTGAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGRGSYC*GQLRQQ
Trigger: CTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCT...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGCCGAGGTGGGCTTCTaGTCTATGAAAGGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLAEVGF*SMKGVV
Trigger: CACAACTCCTTTCATAGACAAGAAGCCCACCTCGGC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCGCCGAGGTGGGCTTCTaGTCTATGAAAGGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRAEVGF*SMKGVV
Trigger: CACAACTCCTTTCATAGACAAGAAGCCCACCTCGGC...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTTCCGTGGAGCCAACCTaGGAGCGGACATTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: KAGGKASLAGCPARRPSASVEPT*ERTFFR
Trigger: TCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGA...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTACCACCAGGCTTGTGCTaGATGTTAGCCTTAGACCCA +
Preference number: 5 (lower is better)
Translates to: GAGLLLPRARKAGGKASLPPGLC*MLALDP
Trigger: TGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGG...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGTCTCCTCCACCAGGCTaGTGCTTGATGTTAGCCTTA +
Preference number: 5 (lower is better)
Translates to: APGTQSRREGEPSGLPSTSPPPG*CLMLAL
Trigger: TAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGA...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGTCTCCTCCACCAGGCTaGTGCTTGATGTTAGCCTTA +
Preference number: 5 (lower is better)
Translates to: PRARKAGGKASLAGCPARSPPPG*CLMLAL
Trigger: TAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGA...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGATGGCTGCATGTCCTaGGCCAGTGTCACATCTAAT +
Preference number: 5 (lower is better)
Translates to: APGTQSRREGEPSGLPSTDGCMS*ASVTSN
Trigger: ATTAGATGTGACACTGGCCAAGGACATGCAGCCATC...CGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGGTGGAGTCACATCCTaGCCCAGAGCCATTTCTGTT +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLGGVTS*PRAISV
Trigger: AACAGAAATGGCTCTGGGCAAGGATGTGACTCCACC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGTGGTGGCCAAAGGCTTaGTTTTCTTCTCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAWWPKA*FSSLGL
Trigger: CAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCA...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCGTTGTTTCTGTGCACTaGCAATTGGGCCGGCTGTTT +
Preference number: 5 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSVVSVH*QLGRLF
Trigger: AAACAGCCGGCCCAATTGCAAGTGCACAGAAACAAC...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTATCCTGCCCTTTTTCCTaGCTGCTTCCTTCAGGAATC +
Preference number: 5 (lower is better)
Translates to: GAGLLLPRARKAGGKASLSCPFS*LLPSGI
Trigger: GATTCCTGAAGGAAGCAGCAAGGAAAAAGGGCAGGA...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CAA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTCTTCCTCGTCGCCTCTaGAGGGCCGGCGCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPLPRRL*RAGARE
Trigger: CTCCCTTGCGCCGGCCCTCAAGAGGCGACGAGGAAG...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS-3UTR CAA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGAGCTAGTGCCATGTCCTaGGCGAGGGCCATCTCTGTT +
Preference number: 5 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGASAMS*ARAISV
Trigger: AACAGAGATGGCCCTCGCCAAGGACATGGCACTAGC...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGTGGTGGCCAAAGGCTTaGTTTTCTTCTCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLWWPKA*FSSLGL
Trigger: CAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCA...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCGTCATCATTAGATGCTaGTCTCCTGGATCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPVIIRC*SPGSGC
Trigger: ACAGCCAGATCCAGGAGACAAGCATCTAATGATGAC...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CAA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGGCACTGACCCCCAACTaGGGGCAGGGCAGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPALTPN*GQGSKK
Trigger: CTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGC...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGAAGCCCATCTTTTGGTaGCCCGTCCATGCTGACATT +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLKPIFW*PVHADI
Trigger: AATGTCAGCATGGACGGGCAACCAAAAGATGGGCTT...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CAA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTACTCACATCTGTCACCTaGGCAGGTGGTTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: GAGLLLPRARKAGGKASLLTSVT*AGGSVT
Trigger: TGTTACTGAACCACCTGCCAAGGTGACAGATGTGAG...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS CCA 90 bp CAGGAGGGACCCTGGCAGGCTTGGGCCGGGTTGACCTGCGGTCACTaGGTCTGCAAACTTGTTTGGCTTGTGTGGGAGGGGTACCGCAAT +
Preference number: 5 (lower is better)
Translates to: QEGPWQAWAGLTCGH*VCKLVWLVWEGYRN
Trigger: ATTGCGGTACCCCTCCCACACAAGCCAAACAAGTTTGCAGACCCAGTGACCGCAGGTCAACCCGGCCCAAGCCTGCCAGGGTCCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCATCTGCAATGGGCTTaGTTTTCTTCTCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLHLQWA*FSSLGL
Trigger: CAAGCCCAGAGAAGAAAACAAAGCCCATTGCAGATG...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS-3UTR CAA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCGGGGCAGAAGCTGGCTaGGATGGTGAGGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: VKPPQGTATSERGRTCQAGAEAG*DGEARF
Trigger: GAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCC...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGGGGCAGAAGCTGGCTaGGATGGTGAGGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: QTSTRHCYLRKGEDLSGPGAEAG*DGEARF
Trigger: GAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCC...TGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGTTTGCAGTCATCTTCTaGACTTCTGCAGGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAFAVIF*TSAGFP
Trigger: GGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAA...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCCTGTGCTGTTGCCCCTGAGGTGTCTCCTGACTACGCAACCCTGTTTCCTTCCGGCATGGGTGTGGCCTaGACTCGGCTGGGAACCACC +
Preference number: 5 (lower is better)
Translates to: ACAVAPEVSPDYATLFPSGMGVA*TRLGTT
Trigger: GGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCC...GGAAGGAAACAGGGTTGCGTAGTCAGGAGACACCTCAGGGGCAACAGCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CAA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCGCCGAGGTGGGCTTCTaGTCTATGAAAGGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSAEVGF*SMKGVV
Trigger: CACAACTCCTTTCATAGACAAGAAGCCCACCTCGGC...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCGGGACATGCTTAATATaGTCCTTGGAACCACACTTG +
Preference number: 5 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPGTCLI*SLEPHL
Trigger: CAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCC...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
CDS-3UTR CAA 90 bp CCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGGGGACATGCTTAATATaGTCCTTGGAACCACACTTG +
Preference number: 5 (lower is better)
Translates to: PGTQSRREGEPSGLPSTAGTCLI*SLEPHL
Trigger: CAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCC...CGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
CDS-3UTR CAA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCGCCTTAGACCCACACTaGGAGGAGACCTTAGAGATG +
Preference number: 5 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSALDPH*EETLEM
Trigger: CATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGC...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCCCACCAGGCTTGTGCTaGATGTTAGCCTTAGACCCA +
Preference number: 5 (lower is better)
Translates to: RPSAHWSSGQPGKGGQGPPPGLC*MLALDP
Trigger: TGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGG...GGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: QQKCSAHGLYGGKLVPLACGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...GGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGCCAGTTCTGGCTATTaGGGTATTCCTGGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: RPSAHWSSGQPGKGGQGPASSGY*GIPGRP
Trigger: TGGCCTACCAGGAATACCCAAATAGCCAGAACTGGC...GGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CAA 90 bp CCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGGACCACTTGCTCAGGTaGGAAACAAAAGTTGGTATC +
Preference number: 5 (lower is better)
Translates to: PRARKAGGKASLAGCPARDHLLR*ETKVGI
Trigger: GATACCAACTTTTGTTTCCAACCTGAGCAAGTGGTC...CCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCGCCATTTCTATCTCCTaGGCTAGCTCTAAGGGAACT +
Preference number: 5 (lower is better)
Translates to: QSRREGEPSGLPSTAPKRAISIS*ASSKGT
Trigger: AGTTCCCTTAGAGCTAGCCAAGGAGATAGAAATGGC...GCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGCCATTTCTATCTCCTaGGCTAGCTCTAAGGGAACT +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLAISIS*ASSKGT
Trigger: AGTTCCCTTAGAGCTAGCCAAGGAGATAGAAATGGC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGGTAGTTCCATGTCCTaGACTAGGGCCATATCTGAT +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLGSSMS*TRAISD
Trigger: ATCAGATATGGCCCTAGTCAAGGACATGGAACTACC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTCACTGGGGCAGTACCACATTCTaGGCTGAAGATACATCTGTT +
Preference number: 5 (lower is better)
Translates to: GGKASLAGCPARRPSAHWGSTTF*AEDTSV
Trigger: AACAGATGTATCTTCAGCCAAGAATGTGGTACTGCC...CCAGTGAGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCGCATGTCAGTTTCTTTaGGGTTTGGACCAAAGAACC +
Preference number: 5 (lower is better)
Translates to: AAPGTQSRREGEPSGLPSACQFL*GLDQRT
Trigger: GGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGC...GCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGCCATTCGAATCCGGCTaGACTGATTTCTTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: AGLLLPRARKAGGKASLAPFESG*TDFFWG
Trigger: TCCCCAAAAGAAATCAGTCAAGCCGGATTCGAATGG...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CAA 90 bp GCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGTACACCCATAACCTCTaGGTCCAAGAAAGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: AGLLLPRARKAGGKASLAYTHNL*VQERRA
Trigger: TGCTCTCCTTTCTTGGACCAAGAGGTTATGGGTGTA...CGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS CCA 90 bp TCTTTGGGCGACTCAAGTCAGCAGTGGGCTTCTTGGGCAGGAGCGTaGAGGGGCTCCTACTGCTTGGGCCAGTTGAGGCAACAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SLGDSSQQWASWAGA*RGSYCLGQLRQQQQ
Trigger: CTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCTGACTTGAGTCGCCCAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGGGACATGCTTAATATaGTCCTTGGAACCACACTTG +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLGTCLI*SLEPHL
Trigger: CAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
CDS-3UTR CAA 90 bp GCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGGACCACTTGCTCAGGTaGGAAACAAAAGTTGGTATC +
Preference number: 5 (lower is better)
Translates to: AAAAPGTQSRREGEPSGLDHLLR*ETKVGI
Trigger: GATACCAACTTTTGTTTCCAACCTGAGCAAGTGGTC...CAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGGGCAGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGATAGGATCGACCACTaGCTCAGGTTGGAAACAAAA +
Preference number: 5 (lower is better)
Translates to: GAGLLLPRARKAGGKASLDRIDH*LRLETK
Trigger: TTTTGTTTCCAACCTGAGCAAGTGGTCGATCCTATC...TAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCTTGGCTGGGACTATCTaGTTTTCTTTGGGTGGTCCC +
Preference number: 5 (lower is better)
Translates to: RPSAHWSSGQPGKGGQGPLAGTI*FSLGGP
Trigger: GGGACCACCCAAAGAAAACAAGATAGTCCCAGCCAA...GGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CAA 90 bp CGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCTCGATGTTGAAGTCTTaGCAGGTTGAGTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: RPSAHWSSGQPGKGGQGPSMLKS*QVEWWP
Trigger: TGGCCACCACTCAACCTGCAAAGACTTCAACATCGA...GGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCTCGATGTTGAAGTCTTaGCAGGTTGAGTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSSMLKS*QVEWWP
Trigger: TGGCCACCACTCAACCTGCAAAGACTTCAACATCGA...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGACTTTCCCCGCAGGTaGTTTCTGTGCACTTGCAAT +
Preference number: 5 (lower is better)
Translates to: RPSAHWSSGQPGKGGQGPDFPRR*FLCTCN
Trigger: ATTGCAAGTGCACAGAAACAACCTGCGGGGAAAGTC...GGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CAA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTGCACTGACCCCCAACTaGGGGCAGGGCAGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPALTPN*GQGSKK
Trigger: CTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGC...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS TCA 90 bp CTTGGACCCAGATCTGGAGGCTGGGGCAGAAGCTGGCTTGGATGGTaGGGCCCGCTTCTCAGGAGCCTTTGCATCTGCAATGGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: LGPRSGGWGRSWLGW*GPLLRSLCICNGLW
Trigger: CCAAAGCCCATTGCAGATGCAAAGGCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS CCA 90 bp GAGTGCTCTTGGACCCAGATCTGGAGGCTGGGGCAGAAGCTGGCTTaGATGGTGAGGCCCGCTTCTCAGGAGCCTTTGCATCTGCAATGG +
Preference number: 5 (lower is better)
Translates to: ECSWTQIWRLGQKLA*MVRPASQEPLHLQW
Trigger: CCATTGCAGATGCAAAGGCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
ENST00000462206.1
ENST00000683076.1
CDS-3UTR CAA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTTCCGTGGAGCCAACCTaGGAGCGGACATTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: AAHILQRGWHKDISALFPSVEPT*ERTFFR
Trigger: TCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGA...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTCCTCCTCTCCTCCACCAGGCTaGTGCTTGATGTTAGCCTTA +
Preference number: 5 (lower is better)
Translates to: AAIPRPSWDALCGPCLSSSPPPG*CLMLAL
Trigger: TAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGA...GGAGGAGAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTGATAGGATCGACCACTaGCTCAGGTTGGAAACAAAA +
Preference number: 5 (lower is better)
Translates to: KAGGKASLAGCPARRPSADRIDH*LRLETK
Trigger: TTTTGTTTCCAACCTGAGCAAGTGGTCGATCCTATC...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp AGGGCTGCTGCTGCCCCGGGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGTTTGTCCTGCAAATATaGAAGTATCAGCTGTCGCAC +
Preference number: 5 (lower is better)
Translates to: RAAAAPGTQSRREGEPSGFVLQI*KYQLSH
Trigger: GTGCGACAGCTGATACTTCAATATTTGCAGGACAAA...CCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCCCGGGGCAGCAGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAGTGTCACATCTAATTaGGTGGGTGATTCCATATCT +
Preference number: 5 (lower is better)
Translates to: GTQSRREGEPSGLPSTAPSVTSN*VGDSIS
Trigger: AGATATGGAATCACCCACCAAATTAGATGTGACACT...GGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCGCTGGAGTCACATTGTaGGCCAGGGTCAGAACCCCA +
Preference number: 5 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLAGVTL*ARVRTP
Trigger: TGGGGTTCTGACCCTGGCCAACAATGTGACTCCAGC...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCAGTGGTGGAACATCTTaGGCTGGAGTCACATTGTTG +
Preference number: 5 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSSGGTS*AGVTLL
Trigger: CAACAATGTGACTCCAGCCAAAGATGTTCCACCACT...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGATGGTGGCCAAAGGCTTaGTTTTCTTCTCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGWWPKA*FSSLGL
Trigger: CAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCA...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCACGCAAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCATTTTGGCTTTCGATGTaGAAGTCTTTGCAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: ARKAGGKASLAGCPARRPFWLSM*KSLQVE
Trigger: CTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAA...TGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTTGCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCCATCTGCAATGGGCTTaGGCTTCACGTCTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: RPSAHWSSGQPGKGGQGPHLQWA*ASRLLK
Trigger: CTTCAAAAGACGTGAAGCCAAAGCCCATTGCAGATG...GGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCCCAGCACGGCGCCCAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGCTGAGCTTTTGTGCTTaGTCTTCCAGTAAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: AQHGAQALTGLVDSPGKGLSFCA*SSSKSG
Trigger: TCCTGACTTACTGGAAGACAAAGCACAAAAGCTCAG...CCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTGGGCGCCGTGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCTGGTGGAGGTGCTCTTaGGGCGACTCAAGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGIWWRCS*GDSSQQ
Trigger: CTGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCA...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CAA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTAGGGGTCCTTTCAGATaGAGAGGGCCTACTGACTGG +
Preference number: 5 (lower is better)
Translates to: AAHILQRGWHKDISALFPRGPFR*RGPTDW
Trigger: CCAGTCAGTAGGCCCTCTCAATCTGAAAGGACCCCT...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS TCA 90 bp CTTGGACCCAGATCTGGAGGCTGGGGCAGAAGCTGGCTTGGATGGTaGGGCCCGCTTCTCAGGAGCCTTTGCATCTGCAATGGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: LGPRSGGWGRSWLGW*GPLLRSLCICNGLC
Trigger: ACAAAGCCCATTGCAGATGCAAAGGCTCCTGAGAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335271.9
ENST00000420772.6
ENST00000462206.1
CDS TCA 90 bp ACTGAGCTGACCGTACGCGGCAGTGAGAGAGGCTGTCTGCTTGTCTaGGAGCGACATCGTCTCTCCTCCACTGCTCTCCCTGCTTTCGCT +
Preference number: 5 (lower is better)
Translates to: TELTVRGSERGCLLV*ERHRLSSTALPAFA
Trigger: AGCGAAAGCAGGGAGAGCAGTGGAGGAGAGACGATGTCGCTCTCAGACAAGCAGACAGCCTCTCTCACTGCCGCGTACGGTCAGCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 90 bp TTTGGGGAGTCCATTCGGCACTCTGCAGGCTTGCCCTTACTGAGCTaGCCGTACGCGGCAGTGAGAGAGGCTGTCTGCTTGTCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: FGESIRHSAGLPLLS*PYAAVREAVCLSES
Trigger: GCTCTCAGACAAGCAGACAGCCTCTCTCACTGCCGCGTACGGTCAGCTCAGTAAGGGCAAGCCTGCAGAGTGCCGAATGGACTCCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS-3UTR CAA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCTACTGCTTGGGCCAGTaGAGGCAACAGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: VKPPQGTATSERGRTCQAYCLGQ*RQQQQL
Trigger: CAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTA...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCATACTGCTTGGGCCAGTaGAGGCAACAGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPYCLGQ*RQQQQL
Trigger: CAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTA...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCTCCGTGGAGCCAACCTaGGAGCGGACATTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLSVEPT*ERTFFR
Trigger: TCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGA...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTTTTGTCCTGCAAATATaGAAGTATCAGCTGTCGCAC +
Preference number: 5 (lower is better)
Translates to: KAGGKASLAGCPARRPSAFVLQI*KYQLSH
Trigger: GTGCGACAGCTGATACTTCAATATTTGCAGGACAAA...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTTGGCTGGGACTATCTaGTTTTCTTTGGGTGGTCCC +
Preference number: 5 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLLAGTI*FSLGGP
Trigger: GGGACCACCCAAAGAAAACAAGATAGTCCCAGCCAA...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTGCTGGAGTCACATTGTaGGCCAGGGTCAGAACCCCA +
Preference number: 5 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPAGVTL*ARVRTP
Trigger: TGGGGTTCTGACCCTGGCCAACAATGTGACTCCAGC...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCACCAGCCACAGCAGAAAGCTCAGAAGGTaGACTGTTGCATGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PVHAPRAPCVPDRLTSHSRKLRR*TVAWFP
Trigger: AGGAAACCATGCAACAGTCAACCTTCTGAGCTTTCT...GCTGTGGCTGGTGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAGCACTGACCCCCAACTaGGGGCAGGGCAGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTALTPN*GQGSKK
Trigger: CTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGC...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCTCTCCTGGCCCTTTCTaGTTCTCCAGCCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGISPGPF*FSSPGF
Trigger: AAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGA...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCAACCTACCCCCAACCTTaGGCCAAAGGAGTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPTYPQP*AKGVKG
Trigger: TCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGT...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CAA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCAGGTCTGCAAACTTGTTaGGCTTGTGTGGGAGGGGTA +
Preference number: 5 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSGLQTC*ACVGGV
Trigger: TACCCCTCCCACACAAGCCAAACAAGTTTGCAGACC...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS TCA 90 bp GCCAGGGGTGATGCTATTCTCCATCTCTCCCGGAGTTGCTTCCCTTaGGCCCAGAGAGCCTTGAGCCACTGGATGAAAGCTGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: ARGDAILHLSRSCFP*AQRALSHWMKAGVP
Trigger: TGGAACCCCAGCTTTCATCCAGTGGCTCAAGGCTCTCTGGGCTCAAGGGAAGCAACTCCGGGAGAGATGGAGAATAGCATCACCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS GCA 90 bp GCTGGGTGGGCTAGAGACACCAGGAGTGGGGACTCACACTTCAGCTaGTCAGAGTTATCATTTACCACCCCAATCACTGGGCAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: AGWARDTRSGDSHFS*SELSFTTPITGQPG
Trigger: CCCTGGCTGCCCAGTGATTGGGGTGGTAAATGATAACTCTGAGCAGCTGAAGTGTGAGTCCCCACTCCTGGTGTCTCTAGCCCACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CCA 90 bp CTTCATAGCAGGAGCTCCCAGTTTCCCAGGTGTAGGACTAGGCATTaGGCTACTAGGGGGAGGCAGCAGGCCAGAAGAAGGCTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: LHSRSSQFPRCRTRH*ATRGRQQARRRLFS
Trigger: CGAGAAGAGCCTTCTTCTGGCCTGCTGCCTCCCCCTAGTAGCCCAATGCCTAGTCCTACACCTGGGAAACTGGGAGCTCCTGCTATGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS-3UTR CAA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCTTTTCTTCTCTGGGCTaGGTGGGAGCTCCTTGTTCG +
Preference number: 5 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLFSSLG*VGAPCS
Trigger: CGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAA...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTGCCTTAGACCCACACTaGGAGGAGACCTTAGAGATG +
Preference number: 5 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTALDPH*EETLEM
Trigger: CATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGC...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCGCCTTAGACCCACACTaGGAGGAGACCTTAGAGATG +
Preference number: 5 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLALDPH*EETLEM
Trigger: CATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGC...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp TTCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCGCCTTAGACCCACACTaGGAGGAGACCTTAGAGATG +
Preference number: 5 (lower is better)
Translates to: FPGFLLTAAIPRPSWDALALDPH*EETLEM
Trigger: CATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGC...GAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCCACCAGGCTTGTGCTaGATGTTAGCCTTAGACCCA +
Preference number: 5 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLPPGLC*MLALDP
Trigger: TGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGG...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp AAAGCAGGAGGGAAGGCGAGCCTAGCGGGCTGCCCAGCACGGCGCCCAAGCGCTAGTAATACCAAATCCTaGGCTGGGACTATCTTGTTT +
Preference number: 5 (lower is better)
Translates to: KAGGKASLAGCPARRPSASNTKS*AGTILF
Trigger: AAACAAGATAGTCCCAGCCAAGGATTTGGTATTACT...AGCGCTTGGGCGCCGTGCTGGGCAGCCCGCTAGGCTCGCCTTCCCTCCTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTGTTGTTTCTGTGCACTaGCAATTGGGCCGGCTGTTT +
Preference number: 5 (lower is better)
Translates to: AAHILQRGWHKDISALFPVVSVH*QLGRLF
Trigger: AAACAGCCGGCCCAATTGCAAGTGCACAGAAACAAC...AGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTTCTCCTGGCCCTTTCTaGTTCTCCAGCCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPSPGPF*FSSPGF
Trigger: AAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGA...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCTGCATGAGGCTCCCTaGGACATGAGGGCTTACATG +
Preference number: 5 (lower is better)
Translates to: VKPPQGTATSERGRTCQALHEAP*DMRAYM
Trigger: CATGTAAGCCCTCATGTCCAAGGGAGCCTCATGCAG...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGGCTCCCTCATGTTCTaGGCACAGCAGAAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSGSLMF*AQQKCS
Trigger: AGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCC...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCACTGGGTCTGCAAACTaGTTTGGCTTGTGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGITGSAN*FGLCGR
Trigger: CCTCCCACACAAGCCAAACAAGTTTGCAGACCCAGT...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp CAAGCGCTCACTGGTCTAGTGGACAGCCCGGGAAAGGGGGCCAAGGACCCGGGAGAACTTATTGCAGTTTaGGGGGCTTCTTCAGAAGGA +
Preference number: 5 (lower is better)
Translates to: QALTGLVDSPGKGAKDPGELIAV*GASSEG
Trigger: TCCTTCTGAAGAAGCCCCCAAAACTGCAATAAGTTC...TCCCGGGTCCTTGGCCCCCTTTCCCGGGCTGTCCACTAGACCAGTGAGCGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp CAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCCCCCTGGATTTGCTCTaGGCAGCTCACATCTGTCAC +
Preference number: 5 (lower is better)
Translates to: QQKCSAHGLYGGKLVPLAPLDLL*AAHICH
Trigger: GTGACAGATGTGAGCTGCCAAGAGCAAATCCAGGGG...GGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS TCA 90 bp CTTCTTGGGCAGGAGCGTGGAGGGGCTCCTACTGCTTGGGCCAGTTaGGGCAACAGCAGCAGCTGTTGTGGTTTTTGCAACAGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: LLGQERGGAPTAWAS*GNSSSCCGFCNSLS
Trigger: ACTCAGACTGTTGCAAAAACCACAACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
ENST00000462206.1
ENST00000683076.1
CDS TCA 90 bp CTCCCTCAATGTCTGGAGATGGTTCTGTTAATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACCACTGCAACTGCCCGCCGCCGCCGA +
Preference number: 5 (lower is better)
Translates to: LPQCLEMVLLMHLQD*GQPFCTTATARRRR
Trigger: TCGGCGGCGGCGGGCAGTTGCAGTGGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCATTAACAGAACCATCTCCAGACATTGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000439356.2
CDS TCA 90 bp CTCCCTCAATGTCTGGAGATGGTTCTGTTAATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACCACTGCAACTGCCCGGCGAGCGCCG +
Preference number: 5 (lower is better)
Translates to: LPQCLEMVLLMHLQD*GQPFCTTATARRAP
Trigger: CGGCGCTCGCCGGGCAGTTGCAGTGGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCATTAACAGAACCATCTCCAGACATTGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468075.2
CDS GCA 90 bp TCCTGGGTGAACACCATAGTGATTGGCGGAATGGTGGTGGGTGAATaGTCAATAATGGGGGCTGGGTGGGCTAGAGACACCAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: SWVNTIVIGGMVVGE*SIMGAGWARDTRSG
Trigger: CCCACTCCTGGTGTCTCTAGCCCACCCAGCCCCCATTATTGAGCATTCACCCACCACCATTCCGCCAATCACTATGGTGTTCACCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CCA 90 bp GGGCTTTGTTTTCTTCTCTGGGCTTGGTGGGAGCTCCTTGTTCGGTaGGGTGGTGATGTCATTTCCTGTCCCACTCACCACAGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: GLCFLLWAWWELLVR*GGDVISCPTHHRPS
Trigger: GGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCACCACCCCACCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335271.9
ENST00000420772.6
ENST00000462206.1
CDS CCA 90 bp ATTGGCGGAATGGTGGTGGGTGAATGCTCAATAATGGGGGCTGGGTaGGCTAGAGACACCAGGAGTGGGGACTCACACTTCAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: IGGMVVGECSIMGAG*ARDTRSGDSHFSCS
Trigger: TGAGCAGCTGAAGTGTGAGTCCCCACTCCTGGTGTCTCTAGCCCACCCAGCCCCCATTATTGAGCATTCACCCACCACCATTCCGCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS-3UTR CAA 90 bp ACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCTTTCTTCCTGCTTGGTGGGAGCTCCTaGTTCGGTGGGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: TTQPCFLPTFIPAGPFFLLGGSS*FGGVVM
Trigger: CATCACCACCCCACCGAACAAGGAGCTCCCACCAAG...CAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CAA 90 bp TGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGGCTTTTCTTCTCTGGGCTaGGTGGGAGCTCCTTGTTCG +
Preference number: 5 (lower is better)
Translates to: CRPEGIPSPGPFLFSSPGFSSLG*VGAPCS
Trigger: CGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAA...GCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGGGCAGAAGCTGGCTaGGATGGTGAGGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKAGAEAG*DGEARF
Trigger: GAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCC...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACATACTGCTTGGGCCAGTaGAGGCAACAGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTYCLGQ*RQQQQL
Trigger: CAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTA...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGTGGTGGAGGTGCTCTTaGGGCGACTCAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: QRGWHKDISALFPLTLTEWWRCS*GDSSQL
Trigger: CAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCA...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAATGGTGGAGGTGCTCTTaGGGCGACTCAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEWWRCS*GDSSQL
Trigger: CAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCA...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTTCTCCTCCACCAGGCTaGTGCTTGATGTTAGCCTTA +
Preference number: 5 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTSPPPG*CLMLAL
Trigger: TAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGA...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGAGCACGGTTTCTTCTTaGACTCTGAGTTCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPSTVSS*TLSSRF
Trigger: AAACCGGGAACTCAGAGTCAAAGAAGAAACCGTGCT...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCGCCAGTTCTGGCTATTaGGGTATTCCTGGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: VKPPQGTATSERGRTCQAASSGY*GIPGRP
Trigger: TGGCCTACCAGGAATACCCAAATAGCCAGAACTGGC...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCGATAGGATCGACCACTaGCTCAGGTTGGAAACAAAA +
Preference number: 5 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLDRIDH*LRLETK
Trigger: TTTTGTTTCCAACCTGAGCAAGTGGTCGATCCTATC...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGGCCATTTCTATCTCCTaGGCTAGCTCTAAGGGAACT +
Preference number: 5 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPAISIS*ASSKGT
Trigger: AGTTCCCTTAGAGCTAGCCAAGGAGATAGAAATGGC...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACATTATTTCCAATGCTaGTGCTGGTGGCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPHYFQC*CWWPLF
Trigger: GAAGAGAGGCCACCAGCACAAGCATTGGAAATAATG...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp TTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCTTGGTCAAGATCACGTaGGTTTCCGGGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: LSSTVSVLSPLGIHLHSSLVKIT*VSGGSV
Trigger: GACACTGCCCCCGGAAACCAACGTGATCTTGACCAA...GGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGGACGGAGCCACATCCTaGGCCGGGGCTATTTCTGTT +
Preference number: 5 (lower is better)
Translates to: QRGWHKDISALFPLTLTEDGATS*AGAISV
Trigger: AACAGAAATAGCCCCGGCCAAGGATGTGGCTCCGTC...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCAGGTGGAGTCACATCCTaGCCCAGAGCCATTTCTGTT +
Preference number: 5 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPGGVTS*PRAISV
Trigger: AACAGAAATGGCTCTGGGCAAGGATGTGACTCCACC...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCTGGTGGCCAAAGGCTTaGTTTTCTTCTCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GSGLSSTVSVLSPLGIHLWWPKA*FSSLGL
Trigger: CAAGCCCAGAGAAGAAAACAAAGCCTTTGGCCACCA...GAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCAGAAGTGGGCTGTGTTTaGGCTTTCGATGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSEVGCV*AFDVEV
Trigger: GACTTCAACATCGAAAGCCAAAACACAGCCCACTTC...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGCATCTGCAATGGGCTTaGGCTTCACGTCTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPHLQWA*ASRLLK
Trigger: CTTCAAAAGACGTGAAGCCAAAGCCCATTGCAGATG...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGTCATCATTAGATGCTaGTCTCCTGGATCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: GRCGPWHLPGTSACRSQSVIIRC*SPGSGC
Trigger: ACAGCCAGATCCAGGAGACAAGCATCTAATGATGAC...AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CAA 90 bp GGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCACCTTCCTTTACTACTaGAGGAGTAGGAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: GRGSGLSSTVSVLSPLGITFLYY*RSRSGQ
Trigger: CTGCCCACTCCTACTCCTCAAGTAGTAAAGGAAGGT...GATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp CCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACCTTCTCCAGCAGGCTTGGGCCGGGTaGACCTGCGGTCACTGGGTC +
Preference number: 5 (lower is better)
Translates to: PCTWRSNLNLGQDPYLLQQAWAG*TCGHWV
Trigger: GACCCAGTGACCGCAGGTCAACCCGGCCCAAGCCTG...CTGGAGAAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp GGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCGGACACCTTCCTTCCTaGCTCTGGTTATTGACACCC +
Preference number: 5 (lower is better)
Translates to: GSLLRGKSTLQPIPLQRSGHLPS*LWLLTP
Trigger: GGGTGTCAATAACCAGAGCAAGGAAGGAAGGTGTCC...GCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS GCA 90 bp CGATGGAGTGCTCTGGGTTGCAGTGACCTCAATTTCTTTCTTCCCTaGCAGAGCCGTCTGTCCTGGCTGTTTCTCTCCTCGCTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: RWSALGCSDLNFFLP*QSRLSWLFLSSLAN
Trigger: GTTTGCCAGCGAGGAGAGAAACAGCCAGGACAGACGGCTCTGGCAGGGAAGAAAGAAATTGAGGTCACTGCAACCCAGAGCACTCCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335271.9
ENST00000420772.6
ENST00000497735.1
CDS GCA 90 bp TTGAGGCAACAGCAGCAGCTGTTGTGGTTTTTGCAACAGTCTGAGTaGTCTTGGACCCAGATCTGGAGGCTGGGGCAGAAGCTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LRQQQQLLWFLQQSE*SWTQIWRLGQKLAW
Trigger: CCAAGCCAGCTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAACCACAACAGCTGCTGCTGTTGCCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
ENST00000462206.1
ENST00000683076.1
CDS GCA 90 bp GAGAGGCTGTCTGCTTGTCTGAGAGCGACATCGTCTCTCCTCCACTaGTCTCCCTGCTTTCGCTCCTGGAGCTCTAATACCACCTACGAT +
Preference number: 5 (lower is better)
Translates to: ERLSACLRATSSLLH*SPCFRSWSSNTTYD
Trigger: ATCGTAGGTGGTATTAGAGCTCCAGGAGCGAAAGCAGGGAGAGCAGTGGAGGAGAGACGATGTCGCTCTCAGACAAGCAGACAGCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS GCA 90 bp GAATCCGGCTTGACTGATTTCTTTTGGGGAGTCCATTCGGCACTCTaGAGGCTTGCCCTTACTGAGCTGACCGTACGCGGCAGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: ESGLTDFFWGVHSAL*RLALTELTVRGSER
Trigger: TCTCTCACTGCCGCGTACGGTCAGCTCAGTAAGGGCAAGCCTGCAGAGTGCCGAATGGACTCCCCAAAAGAAATCAGTCAAGCCGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CCA 90 bp AGGCTTTGTTTTCTTCTCTGGGCTTGGTGGGAGCTCCTTGTTCGGTaGGGTGGTGATGTCATTTCCTGTCCCACTCACCACAGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: RLCFLLWAWWELLVR*GGDVISCPTHHRPS
Trigger: GGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCACCACCCCACCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS CCA 90 bp GCCCTCTGTCCTCTGCCATTCGAATCCGGCTTGACTGATTTCTTTTaGGGAGTCCATTCGGCACTCTGCAGGCTTGCCCTTACTGAGCTG +
Preference number: 5 (lower is better)
Translates to: ALCPLPFESGLTDFF*GVHSALCRLALTEL
Trigger: CAGCTCAGTAAGGGCAAGCCTGCAGAGTGCCGAATGGACTCCCCAAAAGAAATCAGTCAAGCCGGATTCGAATGGCAGAGGACAGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CCA 90 bp TTGTCTGGCCCCTCTATGAGTCCCAGATGGAACTCGGAGGTCTTCTaGTGTACCGAGTTCCCCTCCAAGGGATGGCAGGTCTCTGAAATC +
Preference number: 5 (lower is better)
Translates to: LSGPSMSPRWNSEVF*CTEFPSKGWQVSEI
Trigger: GATTTCAGAGACCTGCCATCCCTTGGAGGGGAACTCGGTACACCAGAAGACCTCCGAGTTCCATCTGGGACTCATAGAGGGGCCAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS-3UTR CAA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGTTTGCAGTCATCTTCTaGACTTCTGCAGGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPFAVIF*TSAGFP
Trigger: GGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAA...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTACCTTGGCATGGGTGTGGCCTaGACTCGGCTGGGAACCACC +
Preference number: 5 (lower is better)
Translates to: QPPCTWRSNLNLGQDPYLGMGVA*TRLGTT
Trigger: GGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCC...AAGGTAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGCTAAGGGAACTGCCGTaGGCTGAGGAGGTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: QRGWHKDISALFPLTLTELRELP*AEEVLQ
Trigger: TTGCAGAACCTCCTCAGCCAACGGCAGTTCCCTTAG...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp AAGTCTGGGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCTTGGCTGGGACTATCTaGTTTTCTTTGGGTGGTCCC +
Preference number: 5 (lower is better)
Translates to: KSGAASSEANLHCSQSPSLAGTI*FSLGGP
Trigger: GGGACCACCCAAAGAAAACAAGATAGTCCCAGCCAA...GGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCTCGATGTTGAAGTCTTaGCAGGTTGAGTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GSLLRGKSTLQPIPLQRSSMLKS*QVEWWP
Trigger: TGGCCACCACTCAACCTGCAAAGACTTCAACATCGA...GCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTGTTGTTTCTGTGCACTaGCAATTGGGCCGGCTGTTT +
Preference number: 5 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPVVSVH*QLGRLF
Trigger: AAACAGCCGGCCCAATTGCAAGTGCACAGAAACAAC...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCAGCATGTCAGTTTCTTTaGGGTTTGGACCAAAGAACC +
Preference number: 5 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPACQFL*GLDQRT
Trigger: GGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGC...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGGAGGAGCTTCGACTTaGCTATGTAAGAAATCTGAC +
Preference number: 5 (lower is better)
Translates to: GRCGPWHLPGTSACRSQSGGAST*LCKKSD
Trigger: GTCAGATTTCTTACATAGCAAAGTCGAAGCTCCTCC...AGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp GTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGCCTCCAGAGAAGCCCTaGGAATCTCCCAGGCCATTT +
Preference number: 5 (lower is better)
Translates to: VSWCVLGELGTWCQTSTRPPEKP*ESPRPF
Trigger: AAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAGG...CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGGGCTCCCTCATGTTCTaGGCACAGCAGAAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRGSLMF*AQQKCS
Trigger: AGAACACTTCTGCTGTGCCAAGAACATGAGGGAGCC...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAAGCAAACTTGTTTGGCTaGTGTGGGAGGGGTACCGCA +
Preference number: 5 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEANLFG*CGRGTA
Trigger: TGCGGTACCCCTCCCACACAAGCCAAACAAGTTTGC...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCATGGCAGCTCAGATTTaGCTTTTACCTTCCCAGAAT +
Preference number: 5 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLMAAQI*LLPSQN
Trigger: ATTCTGGGAAGGTAAAAGCAAAATCTGAGCTGCCAT...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCTCCTTGCTCTGGTTATaGACACCCATATCTTTGACT +
Preference number: 5 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLSLLWL*TPISLT
Trigger: AGTCAAAGATATGGGTGTCAATAACCAGAGCAAGGA...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS TCA 90 bp GCTCAGAGTTATCATTTACCACCCCAATCACTGGGCAGCCAGGGGTaGTGCTATTCTCCATCTCTCCCGGAGTTGCTTCCCTTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: AQSYHLPPQSLGSQG*CYSPSLPELLPLSP
Trigger: TGGGCTCAAGGGAAGCAACTCCGGGAGAGATGGAGAATAGCATCACCCCTGGCTGCCCAGTGATTGGGGTGGTAAATGATAACTCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 90 bp TCAGGGTACTTATCTGCAAGGTTGACAGCTGGGGGAACTGAGAGGTaGGAACATTCAGACAGGGCCCTGCGCACTGCCTTTTTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SGYLSARLTAGGTER*EHSDRALRTAFFCW
Trigger: CCAGCAGAAAAAGGCAGTGCGCAGGGCCCTGTCTGAATGTTCTCACCTCTCAGTTCCCCCAGCTGTCAACCTTGCAGATAAGTACCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS GCA 90 bp TCTGCTTGTCTGAGAGCGACATCGTCTCTCCTCCACTGCTCTCCCTaGTTTCGCTCCTGGAGCTCTAATACCACCTACGATCACACAGAG +
Preference number: 5 (lower is better)
Translates to: SACLRATSSLLHCSP*FRSWSSNTTYDHTE
Trigger: CTCTGTGTGATCGTAGGTGGTATTAGAGCTCCAGGAGCGAAAGCAGGGAGAGCAGTGGAGGAGAGACGATGTCGCTCTCAGACAAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CCA 90 bp CCTCTGCTTCTAAAGGTAGTGCTTTATCCTTGGTCAAGATCACGTTaGTTTCCGGGGGCAGTGTCATGTCCCTGGCCAGGGCTACCTCTG +
Preference number: 5 (lower is better)
Translates to: PLLLKVVLYPWSRSR*FPGAVSCPWPGLPL
Trigger: CAGAGGTAGCCCTGGCCAGGGACATGACACTGCCCCCGGAAACCAACGTGATCTTGACCAAGGATAAAGCACTACCTTTAGAAGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp TACCTTTGTTTTCTTCTCTGGGCTTGGTGGGAGCTCCTTGTTCGGTaGGGTGGTGATGTCATTTCCTGTCCCACTCACCACAGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: YLCFLLWAWWELLVR*GGDVISCPTHHRPS
Trigger: GGAAGGCCTGTGGTGAGTGGGACAGGAAATGACATCACCACCCCACCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482752.1
ENST00000497735.1
CDS-3UTR CAA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAATTTTCTTCTCTGGGCTaGGTGGGAGCTCCTTGTTCG +
Preference number: 5 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEFSSLG*VGAPCS
Trigger: CGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAA...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCGGCATGGGTGTGGCCTaGACTCGGCTGGGAACCACC +
Preference number: 5 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCGMGVA*TRLGTT
Trigger: GGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCC...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTGGTAGTGCTTTATCCTaGGTCAAGATCACGTTGGTT +
Preference number: 5 (lower is better)
Translates to: DQRERQWLKLHGQRPVTTGSALS*VKITLV
Trigger: AACCAACGTGATCTTGACCAAGGATAAAGCACTACC...AGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CAGGGCCCTAAGCTGCCCACATCCTCCAGCGGGGGTGGCATAAGGATATCTCCGGGCAGACATACGTTCTaGATGAGAACTACTTCTGTT +
Preference number: 5 (lower is better)
Translates to: QGPKLPTSSSGGGIRISPGRHTF*MRTTSV
Trigger: AACAGAAGTAGTTCTCATCAAGAACGTATGTCTGCC...CGGAGATATCCTTATGCCACCCCCGCTGGAGGATGTGGGCAGCTTAGGGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTGAAGTGGGCTGTGTTTaGGCTTTCGATGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPEVGCV*AFDVEV
Trigger: GACTTCAACATCGAAAGCCAAAACACAGCCCACTTC...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCATCTGCAATGGGCTTaGGCTTCACGTCTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: GSLLRGKSTLQPIPLQRSHLQWA*ASRLLK
Trigger: CTTCAAAAGACGTGAAGCCAAAGCCCATTGCAGATG...GCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCATCATGTAGCCTTTCATaGGTTCTGCCATTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSSCSLS*VLPFCF
Trigger: AAAGCAGAATGGCAGAACCAATGAAAGGCTACATGA...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGTCCAGCGGACTTCAGTaGCTTATGTCTCTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: GQPPQRQIYTAANPPPEKSSGLQ*LMSLLF
Trigger: GAACAAGAGAGACATAAGCAACTGAAGTCCGCTGGA...CTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp AGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTAGATCTGACTGGCTCTaGGTCTCTAGTCCATTCTTC +
Preference number: 5 (lower is better)
Translates to: RQWLKLHGQRPVTTRNPPRSDWL*VSSPFF
Trigger: GAAGAATGGACTAGAGACCAAGAGCCAGTCAGATCT...AGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CAA 90 bp TCTGCAGTGACATGGGAGGAGGGAAGGGAGAGGGGAACAGGGGAGACAAGAGGGTTAGGCTTATCTGCATaGTCATCATCCGAAGGTCCT +
Preference number: 5 (lower is better)
Translates to: SAVTWEEGRERGTGETRGLGLSA*SSSEGP
Trigger: AGGACCTTCGGATGATGACAATGCAGATAAGCCTAA...CCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp TGTGGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCGGTGCAGGCTGTGGTTaGTATTCATGTTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: CGCRPEGIPSPGPFLFSSGAGCG*YSCCFS
Trigger: GCTGAAGCAACATGAATACAAACCACAGCCTGCACC...GCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS TCA 90 bp CATTCAGTTTGCCCTCTGTCCTCTGCCATTCGAATCCGGCTTGACTaGTTTCTTTTGGGGAGTCCATTCGGCACTCTGCAGGCTTGCCCT +
Preference number: 5 (lower is better)
Translates to: HSVCPLSSAIRIRLD*FLLGSPFGTLQACP
Trigger: AGGGCAAGCCTGCAGAGTGCCGAATGGACTCCCCAAAAGAAATCAGTCAAGCCGGATTCGAATGGCAGAGGACAGAGGGCAAACTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 90 bp AGGGAGTTCAGGGTACTTATCTGCAAGGTTGACAGCTGGGGGAACTaGGAGGTGAGAACATTCAGACAGGGCCCTGCGCACTGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: REFRVLICKVDSWGN*EVRTFRQGPAHCLF
Trigger: AAAAAGGCAGTGCGCAGGGCCCTGTCTGAATGTTCTCACCTCTCAGTTCCCCCAGCTGTCAACCTTGCAGATAAGTACCCTGAACTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS GCA 90 bp ATCACGTGGGGGCTTTTCAAACAGGAACGATGGAGTGCTCTGGGTTaGAGTGACCTCAATTTCTTTCTTCCCTGCCAGAGCCGTCTGTCC +
Preference number: 5 (lower is better)
Translates to: ITWGLFKQERWSALG*SDLNFFLPCQSRLS
Trigger: GGACAGACGGCTCTGGCAGGGAAGAAAGAAATTGAGGTCACTGCAACCCAGAGCACTCCATCGTTCCTGTTTGAAAAGCCCCCACGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335271.9
ENST00000420772.6
ENST00000497735.1
CDS-3UTR CAA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCTTGGTGGGAGCTCCTaGTTCGGTGGGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: MRIESGSPLLDPNLASTTLGGSS*FGGVVM
Trigger: CATCACCACCCCACCGAACAAGGAGCTCCCACCAAG...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTTCCGTGGAGCCAACCTaGGAGCGGACATTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: PLSSQGIREADSLSLMPFSVEPT*ERTFFR
Trigger: TCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGA...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCAGGTTGGAAACAAAAGTaGGTATCTTCTGGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: QWLKLHGQRPVTTRNPPPGWKQK*VSSGQF
Trigger: GAACTGGCCAGAAGATACCAACTTTTGTTTCCAACC...TGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GCCTGTGCTGTTGCCCCTGAGGTGTCTCCTGACTACGCAACCCTGTTTCCTTCCGACCACTTGCTCAGGTaGGAAACAAAAGTTGGTATC +
Preference number: 5 (lower is better)
Translates to: ACAVAPEVSPDYATLFPSDHLLR*ETKVGI
Trigger: GATACCAACTTTTGTTTCCAACCTGAGCAAGTGGTC...GGAAGGAAACAGGGTTGCGTAGTCAGGAGACACCTCAGGGGCAACAGCACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395734.7
CDS-3UTR CAA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAGATGGCTGCATGTCCTaGGCCAGTGTCACATCTAAT +
Preference number: 5 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTDGCMS*ASVTSN
Trigger: ATTAGATGTGACACTGGCCAAGGACATGCAGCCATC...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GTGTCTCCTGACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCGGTAGTTCCATGTCCTaGACTAGGGCCATATCTGAT +
Preference number: 5 (lower is better)
Translates to: VSPDYATLFPSHFHPSRPGSSMS*TRAISD
Trigger: ATCAGATATGGCCCTAGTCAAGGACATGGAACTACC...GGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395734.7
CDS-3UTR CAA 90 bp GGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCGGCAGTACCACATTCTaGGCTGAAGATACATCTGTT +
Preference number: 5 (lower is better)
Translates to: GSLLRGKSTLQPIPLQRSGSTTF*AEDTSV
Trigger: AACAGATGTATCTTCAGCCAAGAATGTGGTACTGCC...GCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGGACCAGAGGGAGAGGCAGTGGCTTAAGCTCCACGGTCAGCGTCCTGTCACCAAGTAATACCAAATCCTaGGCTGGGACTATCTTGTTT +
Preference number: 5 (lower is better)
Translates to: GTRGRGSGLSSTVSVLSPSNTKS*AGTILF
Trigger: AAACAAGATAGTCCCAGCCAAGGATTTGGTATTACT...TGGTGACAGGACGCTGACCGTGGAGCTTAAGCCACTGCCTCTCCCTCTGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGCAAAACCAACCAGTCCACGCTCCAAGGGCCCCTTGTGTGCCTGACCGGCTCAAGTAATACCAAATCCTaGGCTGGGACTATCTTGTTT +
Preference number: 5 (lower is better)
Translates to: GKTNQSTLQGPLVCLTGSSNTKS*AGTILF
Trigger: AAACAAGATAGTCCCAGCCAAGGATTTGGTATTACT...TGAGCCGGTCAGGCACACAAGGGGCCCTTGGAGCGTGGACTGGTTGGTTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp TCTGCAGTGACATGGGAGGAGGGAAGGGAGAGGGGAACAGGGGAGACAAGAGGGGGCAGACATACGTTCTaGATGAGAACTACTTCTGTT +
Preference number: 5 (lower is better)
Translates to: SAVTWEEGRERGTGETRGGRHTF*MRTTSV
Trigger: AACAGAAGTAGTTCTCATCAAGAACGTATGTCTGCC...CCCTCTTGTCTCCCCTGTTCCCCTCTCCCTTCCCTCCTCCCATGTCACTGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CAA 90 bp GGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATGGGAGGAGGGAAGGGAGAGTGGTGGAACATCTTaGGCTGGAGTCACATTGTTG +
Preference number: 5 (lower is better)
Translates to: GTSACRSQSAVTWEEGRESGGTS*AGVTLL
Trigger: CAACAATGTGACTCCAGCCAAAGATGTTCCACCACT...CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CAA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAATCGATGTTGAAGTCTTaGCAGGTTGAGTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: PQRQIYTAANPPPEKPLESMLKS*QVEWWP
Trigger: TGGCCACCACTCAACCTGCAAAGACTTCAACATCGA...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAAGACTTTCCCCGCAGGTaGTTTCTGTGCACTTGCAAT +
Preference number: 5 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEDFPRR*FLCTCN
Trigger: ATTGCAAGTGCACAGAAACAACCTGCGGGGAAAGTC...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGGTGCCGGCCTGAAGGAATTCCATCTCCTGGCCCTTTCTTGTTCTCCAGCCCTGCATGTCAGTTTCTTTaGGGTTTGGACCAAAGAACC +
Preference number: 5 (lower is better)
Translates to: GCRPEGIPSPGPFLFSSPACQFL*GLDQRT
Trigger: GGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGC...AGGGCTGGAGAACAAGAAAGGGCCAGGAGATGGAATTCCTTCAGGCCGGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTTCTCCTGGCCCTTTCTaGTTCTCCAGCCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: PLSSQGIREADSLSLMPFSPGPF*FSSPGF
Trigger: AAAGCCAGGGCTGGAGAACAAGAAAGGGCCAGGAGA...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCTCTACCATTAATGATTaGGAAATCTGGGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: VKPPQGTATSERGRTCQASTIND*EIWAGA
Trigger: AGCCCCAGCCCAGATTTCCAAATCATTAATGGTAGA...GGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp CTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTGTGGGCCTTGCCTCATTCTAATGGATTACTaGCTATCAAAGTGGGTACCA +
Preference number: 5 (lower is better)
Translates to: LTAAIPRPSWDALCGPCLILMDY*LSKWVP
Trigger: TGGTACCCACTTTGATAGCAAGTAATCCATTAGAAT...GAGGCAAGGCCCACAGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp CCTGTAGAAGAGGGAATGCTTCCTAAATTCCGGAAGTCGCTGCAAGGATTCAGTGCAGCAGCCCCAGTGTaGAGAGACACGCTAGGCTTC +
Preference number: 5 (lower is better)
Translates to: PVEEGMLPKFRKSLQGFSAAAPV*RDTLGF
Trigger: GAAGCCTAGCGTGTCTCTCAACACTGGGGCTGCTGC...ACTGAATCCTTGCAGCGACTTCCGGAATTTAGGAAGCATTCCCTCTTCTACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CAA 90 bp AAGCAGGTTGTTTGCTCAGGCATCAGCAGAAATAGGCCCCGAAGAACTACCCTCCTGGCTGCCTCACCATaGAGATACTGGACCACTTGG +
Preference number: 5 (lower is better)
Translates to: KQVVCSGISRNRPRRTTLLAASP*RYWTTW
Trigger: CCAAGTGGTCCAGTATCTCAATGGTGAGGCAGCCAG...GAGGGTAGTTCTTCGGGGCCTATTTCTGCTGATGCCTGAGCAAACAACCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS CCA 90 bp ATTCCATCACGTGGGGGCTTTTCAAACAGGAACGATGGAGTGCTCTaGGTTGCAGTGACCTCAATTTCTTTCTTCCCTGCCAGAGCCGTC +
Preference number: 5 (lower is better)
Translates to: IPSRGGFSNRNDGVL*VAVTSISFFPARAV
Trigger: GACGGCTCTGGCAGGGAAGAAAGAAATTGAGGTCACTGCAACCCAGAGCACTCCATCGTTCCTGTTTGAAAAGCCCCCACGTGATGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335271.9
ENST00000420772.6
ENST00000497735.1
CDS CCA 90 bp GATGTGCTGGGAAATTACCTCTATCTGCATATCCTTCTAGGGCTCTaGCCTCTCCTGGTAGGCTCTGGTCTTCTACTGGCACTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: DVLGNYLYLHILLGL*PLLVGSGLLLALQE
Trigger: TTCCTGGAGTGCCAGTAGAAGACCAGAGCCTACCAGGAGAGGCCAGAGCCCTAGAAGGATATGCAGATAGAGGTAATTTCCCAGCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS-3UTR CAA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAGGGGCAGAAGCTGGCTaGGATGGTGAGGCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: KKMRIESGSPLLDPNLASGAEAG*DGEARF
Trigger: GAAGCGGGCCTCACCATCCAAGCCAGCTTCTGCCCC...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCTACTGCTTGGGCCAGTaGAGGCAACAGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: MRIESGSPLLDPNLASTTYCLGQ*RQQQQL
Trigger: CAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTA...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGTTTGCAGTCATCTTCTaGACTTCTGCAGGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRFAVIF*TSAGFP
Trigger: GGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAA...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATGGGAGGAGGGAAGGGAGGGTTGGAAACAAAAGTaGGTATCTTCTGGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GTSACRSQSAVTWEEGREGWKQK*VSSGQF
Trigger: GAACTGGCCAGAAGATACCAACTTTTGTTTCCAACC...CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CAA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGCATTATTTCCAATGCTaGTGCTGGTGGCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: QRGWHKDISALFPLTLTEHYFQC*CWWPLF
Trigger: GAAGAGAGGCCACCAGCACAAGCATTGGAAATAATG...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGGGTAGTGCTTTATCCTaGGTCAAGATCACGTTGGTT +
Preference number: 5 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRGSALS*VKITLV
Trigger: AACCAACGTGATCTTGACCAAGGATAAAGCACTACC...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GTGTCTCCTGACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCAGAAAGCTCAGAAGGTaGACTGTTGCATGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: VSPDYATLFPSHFHPSRPRKLRR*TVAWFP
Trigger: AGGAAACCATGCAACAGTCAACCTTCTGAGCTTTCT...GGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGTCAGGAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395734.7
CDS-3UTR CAA 90 bp CAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTGGCCTTTTGGCTTTCGATGTaGAAGTCTTTGCAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: QQKCSAHGLYGGKLVPLAFWLSM*KSLQVE
Trigger: CTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAA...GGCCAGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp TCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAGAAGTGGGCTGTGTTTaGGCTTTCGATGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: SSEANLHCSQSPSREALGEVGCV*AFDVEV
Trigger: GACTTCAACATCGAAAGCCAAAACACAGCCCACTTC...TCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GCAGTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAGGGAGTCGAACACCCTaGGAAGCAGTCATTATTACT +
Preference number: 5 (lower is better)
Translates to: AVSWCVLGELGTWCQTSTGSRTP*EAVIIT
Trigger: AGTAATAATGACTGCTTCCAAGGGTGTTCGACTCCC...TGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp TCAGGCCCAGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAACCTCCAGAGAAGCCCTaGGAATCTCCCAGGCCATTT +
Preference number: 5 (lower is better)
Translates to: SGPGQPPCTWRSNLNLGQPPEKP*ESPRPF
Trigger: AAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAGG...TTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp TCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGCCCAGGACAGTTGACACCCATATCTTaGACTACATCTCCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: STRHCYLRKGEDLSGPGQLTPIS*TTSPVS
Trigger: AGAAACAGGAGATGTAGTCAAAGATATGGGTGTCAA...CTGTCCTGGGCCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp ACTACGCAACCCTGTTTCCTTCCCACTTTCATCCCAGCAGGCCCTTTCTTCCTGCCTGTAGGTCTCAATTaGTCTCCTGGATCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: TTQPCFLPTFIPAGPFFLPVGLN*SPGSGC
Trigger: ACAGCCAGATCCAGGAGACAAATTGAGACCTACAGG...CAGGAAGAAAGGGCCTGCTGGGATGAAAGTGGGAAGGAAACAGGGTTGCGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429422.5
CDS TCA 90 bp AGCTGGCATTCTTCACAAGCCCATCTTTTGGTTGCCCGTCCATGCTaGCATTCAGCCCAATTTCATTCAGTTTGCCCTCTGTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SWHSSQAHLLVARPC*HSAQFHSVCPLSSA
Trigger: GGCAGAGGACAGAGGGCAAACTGAATGAAATTGGGCTGAATGTCAGCATGGACGGGCAACCAAAAGATGGGCTTGTGAAGAATGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 90 bp CATCACCACTGCCTCCGTGAGATCAGCCTTAGTGCCTGGTTGCTTTaGAGAATTCAGCCCCAGCTCCTCACTCTTATCCTGAGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: HHHCLREISLSAWLL*RIQPQLLTLILSSH
Trigger: ATGACTACTCAGGATAAGAGTGAGGAGCTGGGGCTGAATTCTTCAAAGCAACCAGGCACTAAGGCTGATCTCACGGAGGCAGTGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 90 bp AAGGACTCTGAGTGTGGAGAGTTTAAGGCTTCCACAGACCACCCCTaGGGTACAACAGCTGTGTTGCAGGGAGACATACCAGTCTGGATA +
Preference number: 5 (lower is better)
Translates to: KDSECGEFKASTDHP*GTTAVLQGDIPVWI
Trigger: TATCCAGACTGGTATGTCTCCCTGCAACACAGCTGTTGTACCTCAGGGGTGGTCTGTGGAAGCCTTAAACTCTCCACACTCAGAGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423088.5
CDS CCA 90 bp TTTGAGGGCTGGGACCTGATCCTCAGTCAGGGCCACCTCCATTTCTaGAGGCAGACATACGTTCTTGATGAGAACTACTTCTGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: FEGWDLILSQGHLHF*RQTYVLDENYFCFW
Trigger: CCAGAAACAGAAGTAGTTCTCATCAAGAACGTATGTCTGCCTCCAGAAATGGAGGTGGCCCTGACTGAGGATCAGGTCCCAGCCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp GATAACCACCATTCTGGCACCTACCTTTGTTTTCTTCTCTGGGCTTaGTGGGAGCTCCTTGTTCGGTGGGGTGGTGATGTCATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: DNHHSGTYLCFLLWA*WELLVRWGGDVISC
Trigger: ACAGGAAATGACATCACCACCCCACCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGGTAGGTGCCAGAATGGTGGTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482752.1
ENST00000497735.1
CDS-3UTR CAA 90 bp CAGCGGGGGTGGCATAAGGATATCTCCGCCCTGTTCCCTCTAACACTTACTGAGTTTGCAGTCATCTTCTaGACTTCTGCAGGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: QRGWHKDISALFPLTLTEFAVIF*TSAGFP
Trigger: GGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAA...CTCAGTAAGTGTTAGAGGGAACAGGGCGGAGATATCCTTATGCCACCCCCGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGCCTTAGACCCACACTaGGAGGAGACCTTAGAGATG +
Preference number: 5 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKAALDPH*EETLEM
Trigger: CATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGC...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp TCAGGCCCAGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAACCACCAGGCTTGTGCTaGATGTTAGCCTTAGACCCA +
Preference number: 5 (lower is better)
Translates to: SGPGQPPCTWRSNLNLGQPPGLC*MLALDP
Trigger: TGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGG...TTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCTGGGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: LTLTEDFHVDMASTCRTICGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAGCACGGTTTCTTCTTaGACTCTGAGTTCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRSTVSS*TLSSRF
Trigger: AAACCGGGAACTCAGAGTCAAAGAAGAAACCGTGCT...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGAAGGTTGGAAACAAAAGTaGGTATCTTCTGGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: PQRQIYTAANPPPEKPLEGWKQK*VSSGQF
Trigger: GAACTGGCCAGAAGATACCAACTTTTGTTTCCAACC...TTCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCGCTAGTGCCATGTCCTaGGCGAGGGCCATCTCTGTT +
Preference number: 5 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCASAMS*ARAISV
Trigger: AACAGAGATGGCCCTCGCCAAGGACATGGCACTAGC...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTAGTGTCACATCTAATTaGGTGGGTGATTCCATATCT +
Preference number: 5 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPSVTSN*VGDSIS
Trigger: AGATATGGAATCACCCACCAAATTAGATGTGACACT...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTGATGGCTGCATGTCCTaGGCCAGTGTCACATCTAAT +
Preference number: 5 (lower is better)
Translates to: PLSSQGIREADSLSLMPFDGCMS*ASVTSN
Trigger: ATTAGATGTGACACTGGCCAAGGACATGCAGCCATC...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATGGGAGGAGGGAAGGGAGGGCAGACATACGTTCTaGATGAGAACTACTTCTGTT +
Preference number: 5 (lower is better)
Translates to: GTSACRSQSAVTWEEGREGRHTF*MRTTSV
Trigger: AACAGAAGTAGTTCTCATCAAGAACGTATGTCTGCC...CTCCCTTCCCTCCTCCCATGTCACTGCAGATTGAGACCTACAGGCTGACGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000426837.6
CDS-3UTR CAA 90 bp CCCCTCTCCAGTCAGGGCATAAGGGAAGCAGATAGCCTTAGTCTCATGCCTTTTGACTTTCCCCGCAGGTaGTTTCTGTGCACTTGCAAT +
Preference number: 5 (lower is better)
Translates to: PLSSQGIREADSLSLMPFDFPRR*FLCTCN
Trigger: ATTGCAAGTGCACAGAAACAACCTGCGGGGAAAGTC...AAAAGGCATGAGACTAAGGCTATCTGCTTCCCTTATGCCCTGACTGGAGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAGCACTGACCCCCAACTaGGGGCAGGGCAGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: KKMRIESGSPLLDPNLASALTPN*GQGSKK
Trigger: CTTCTTGCTGCCCTGCCCCAAGTTGGGGGTCAGTGC...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp TCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCAGAGAAGCCCTTGGACATTACTCCTTTTACTaGGTTTGTCAGCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: SSEANLHCSQSPSREALGHYSFY*VCQPLQ
Trigger: CTGCAGTGGCTGACAAACCAAGTAAAAGGAGTAATG...TCCAAGGGCTTCTCTGGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp AAGCTCCACGGTCAGCGTCCTGTCACCACTCGGAATCCACCTCCACTCTTCCCTTCTATCTTGAGCATTTaGGTCCTCACAAAAACTGAG +
Preference number: 5 (lower is better)
Translates to: KLHGQRPVTTRNPPPLFPSILSI*VLTKTE
Trigger: CTCAGTTTTTGTGAGGACCAAAATGCTCAAGATAGA...AGGGAAGAGTGGAGGTGGATTCCGAGTGGTGACAGGACGCTGACCGTGGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGTCCTCCAGCCCGTGGTaGAGAATATCTCTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRSSSPW*RISLLL
Trigger: AAGCAAAAGAGATATTCTCAACCACGGGCTGGAGGA...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp TCCCGGGATTTCTCCTCACTGCAGCCATCCCAAGGCCTAGCTGGGATGCCCTCTTGGTTTGTATTCATGTaGCTTCAGCAATTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: SRDFSSLQPSQGLAGMPSWFVFM*LQQFLV
Trigger: GACAAGAAATTGCTGAAGCAACATGAATACAAACCA...AGAGGGCATCCCAGCTAGGCCTTGGGATGGCTGCAGTGAGGAGAAATCCCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp GTACACAACGGAAAGTCATACCCAGGCTTCTCCACCCATAACTTAGACAGCTACCTGGCTGCCTCACCATaGAGATACTGGACCACTTGG +
Preference number: 5 (lower is better)
Translates to: VHNGKSYPGFSTHNLDSYLAASP*RYWTTW
Trigger: CCAAGTGGTCCAGTATCTCAATGGTGAGGCAGCCAG...GTAGCTGTCTAAGTTATGGGTGGAGAAGCCTGGGTATGACTTTCCGTTGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS TCA 90 bp ATTTCATTCAGTTTGCCCTCTGTCCTCTGCCATTCGAATCCGGCTTaGCTGATTTCTTTTGGGGAGTCCATTCGGCACTCTGCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: ISFSLPSVLCHSNPA*LISFGESIRHSAGL
Trigger: CAAGCCTGCAGAGTGCCGAATGGACTCCCCAAAAGAAATCAGTCAAGCCGGATTCGAATGGCAGAGGACAGAGGGCAAACTGAATGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 90 bp CTCCCTCAATGTCTGGAGATGGTTCTGTTAATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACCACTGCAACTGCAGGAACTATCCAG +
Preference number: 5 (lower is better)
Translates to: LPQCLEMVLLMHLQD*GQPFCTTATAGTIQ
Trigger: CTGGATAGTTCCTGCAGTTGCAGTGGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCATTAACAGAACCATCTCCAGACATTGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000683076.1
CDS TCA 90 bp CTCCCTCAATGTCTGGAGATGGTTCTGTTAATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACCACTGCAACTGCTGTGGCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: LPQCLEMVLLMHLQD*GQPFCTTATAVALN
Trigger: ATTCAAGGCCACAGCAGTTGCAGTGGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCATTAACAGAACCATCTCCAGACATTGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633710.1
CDS GCA 90 bp TTCTGCTCCAGGAAGCTGGCATTCTTCACAAGCCCATCTTTTGGTTaGCCGTCCATGCTGACATTCAGCCCAATTTCATTCAGTTTGCCC +
Preference number: 5 (lower is better)
Translates to: FCSRKLAFFTSPSFG*PSMLTFSPISFSLP
Trigger: GGGCAAACTGAATGAAATTGGGCTGAATGTCAGCATGGACGGGCAACCAAAAGATGGGCTTGTGAAGAATGCCAGCTTCCTGGAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS GCA 90 bp GCTGTGTTGCAGGGAGACATACCAGTCTGGATAGGATCGACCACTTaGTCAGGTTGGAAACAAAAGTTGGTATCTTCTGGCCAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: AVLQGDIPVWIGSTT*SGWKQKLVSSGQFW
Trigger: CCAGAACTGGCCAGAAGATACCAACTTTTGTTTCCAACCTGAGCAAGTGGTCGATCCTATCCAGACTGGTATGTCTCCCTGCAACACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423088.5
CDS CCA 90 bp CTCCTCACTCTTATCCTGAGTAGTCATTCCTTCAGTTTTAGAGACTaGCTCACTCGGTATGAGAACAGCCCTTCCGTCCTTCTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: LLTLILSSHSFSFRD*LTRYENSPSVLLAV
Trigger: GACAGCCAGAAGGACGGAAGGGCTGTTCTCATACCGAGTGAGCCAGTCTCTAAAACTGAAGGAATGACTACTCAGGATAAGAGTGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp GTCTTATTCTCCTCAGATACTACTGAAGGAACAAATCCTGCCCCCTaGATTTGCTCTTGGCAGCTCACATCTGTCACCTTGGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: VLFSSDTTEGTNPAP*ICSWQLTSVTLAGG
Trigger: ACCACCTGCCAAGGTGACAGATGTGAGCTGCCAAGAGCAAATCCAGGGGGCAGGATTTGTTCCTTCAGTAGTATCTGAGGAGAATAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS-3UTR CAA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAAGGGGCTCCTACTGCTaGGGCCAGTTGAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: KKMRIESGSPLLDPNLASRGSYC*GQLRQQ
Trigger: CTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCT...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCAGCACGGTTTCTTCTTaGACTCTGAGTTCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPSTVSS*TLSSRF
Trigger: AAACCGGGAACTCAGAGTCAAAGAAGAAACCGTGCT...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAGAAAGCTCAGAAGGTaGACTGTTGCATGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRRKLRR*TVAWFP
Trigger: AGGAAACCATGCAACAGTCAACCTTCTGAGCTTTCT...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGAGGGTGGGGTGGCCATaGAGGCCACTGGCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: TLTEDFHVDMASTCRTILRVGWP*RPLAEV
Trigger: CACTTCAGCCAGTGGCCTCAATGGCCACCCCACCCT...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CTCCAGAGAAGCCCTTGGAATCTCCCAGGCCATTTCACTACAAACTTATGTTTGCCTCCAGAGAAGCCCTaGGAATCTCCCAGGCCATTT +
Preference number: 5 (lower is better)
Translates to: LQRSPWNLPGHFTTNLCLPPEKP*ESPRPF
Trigger: AAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAGG...CAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp AAGTCTGGGGCAGCCTCCTCAGAGGCAAATCTACACTGCAGCCAATCCCCCTCCTTTTGTAGTACTGACTaGTTACTTTTGCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: KSGAASSEANLHCSQSPSFCSTD*LLLLSS
Trigger: GGAAGAGAGCAAAAGTAACAAGTCAGTACTACAAAA...GGAGGGGGATTGGCTGCAGTGTAGATTTGCCTCTGAGGAGGCTGCCCCAGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp GGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGGTCCCCCTAAGTGGGTACCAAATTaGGTATTTCTTTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GTAEVFCTWSLRRKAGPPKWVPN*VFLLLL
Trigger: CAGCAGCAAAAGAAATACCAAATTTGGTACCCACTT...AGGGGGACCAGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp GTGTCAAACCTCCACAAGGCACTGCTACCTCAGAAAGGGGGAGGACCTGTCAGGGTAACAGTAGAAGCCTaGACTGTGCTTATCTTGTTT +
Preference number: 5 (lower is better)
Translates to: VSNLHKALLPQKGGGPVRVTVEA*TVLILF
Trigger: AAACAAGATAAGCACAGTCAAGGCTTCTACTGTTAC...CCTGACAGGTCCTCCCCCTTTCTGAGGTAGCAGTGCCTTGTGGAGGTTTGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp CCTGTAGAAGAGGGAATGCTTCCTAAATTCCGGAAGTCGCTGCAAGGATTCAGTGAGATACTGGACCACTaGGGTGTGACCACTATGGCA +
Preference number: 5 (lower is better)
Translates to: PVEEGMLPKFRKSLQGFSEILDH*GVTTMA
Trigger: TGCCATAGTGGTCACACCCAAGTGGTCCAGTATCTC...ACTGAATCCTTGCAGCGACTTCCGGAATTTAGGAAGCATTCCCTCTTCTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS TCA 90 bp TTTCTCCCACAACATCATCAAAGGCCTCTGCCTCTAGTGTGGCAATaGAGTCCCGCTTTATCTCTCCCTCAATGTCTGGAGATGGTTCTG +
Preference number: 5 (lower is better)
Translates to: FLPQHHQRPLPLVWQ*SPALSLPQCLEMVL
Trigger: CAGAACCATCTCCAGACATTGAGGGAGAGATAAAGCGGGACTTCATTGCCACACTAGAGGCAGAGGCCTTTGATGATGTTGTGGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000434267.5
ENST00000439356.2
ENST00000468075.2
ENST00000633710.1
ENST00000683076.1
CDS TCA 90 bp TACATCTCCTGTTTCTGTGCTAACACCAGAAGTCTGAGTCATGCCTaGTCCACTTTCCAAAGGAATCAATGCCTGCATGGTGCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: YISCFCANTRSLSHA*STFQRNQCLHGACH
Trigger: GTGGCAGGCACCATGCAGGCATTGATTCCTTTGGAAAGTGGATCAGGCATGACTCAGACTTCTGGTGTTAGCACAGAAACAGGAGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS GCA 90 bp ACTCAAGTCAGCTGGTACAGACTTTGCAGTCATCTTCTTGACTTCTaGAGGTTTTCCCTCAGTCTTAATGGCAGTGGGCTTCTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: TQVSWYRLCSHLLDF*RFSLSLNGSGLLGQ
Trigger: CTGCCCAAGAAGCCCACTGCCATTAAGACTGAGGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS GCA 90 bp TCATTCTCTACCCCAGGGACCTGTACCAACACTTGGCCCTGCAGCTaGTCAGAAGTAAAGATGCTGATCTCTTGTCTTTCGTTGGGAAAA +
Preference number: 5 (lower is better)
Translates to: SFSTPGTCTNTWPCS*SEVKMLISCLSLGK
Trigger: TTTTCCCAACGAAAGACAAGAGATCAGCATCTTTACTTCTGAGCAGCTGCAGGGCCAAGTGTTGGTACAGGTCCCTGGGGTAGAGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS GCA 90 bp AATGGTTCATTCTCTACCCCAGGGACCTGTACCAACACTTGGCCCTaGAGCTGCTCAGAAGTAAAGATGCTGATCTCTTGTCTTTCGTTG +
Preference number: 5 (lower is better)
Translates to: NGSFSTPGTCTNTWP*SCSEVKMLISCLSL
Trigger: CAACGAAAGACAAGAGATCAGCATCTTTACTTCTGAGCAGCTGCAGGGCCAAGTGTTGGTACAGGTCCCTGGGGTAGAGAATGAACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp TTCTTCCCTGCCAGAGCCGTCTGTCCTGGCTGTTTCTCTCCTCGCTaGCAAACCTGCGAGCATGAATCAATTCTAGTTTCACTAAAATCT +
Preference number: 5 (lower is better)
Translates to: FFPARAVCPGCFSPR*QTCEHESILVSLKS
Trigger: AGATTTTAGTGAAACTAGAATTGATTCATGCTCGCAGGTTTGCCAGCGAGGAGAGAAACAGCCAGGACAGACGGCTCTGGCAGGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335271.9
ENST00000420772.6
ENST00000497735.1
CDS CCA 90 bp CAGCAGAGGGACCCTTGGGTCTTTCTTGACCTGGGACTCCATCTTTaGTGTAGTTATCTACCATTAATGATTTGGAAATCTGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QQRDPWVFLDLGLHL*CSYLPLMIWKSGLG
Trigger: CCCCAGCCCAGATTTCCAAATCATTAATGGTAGATAACTACACCAAAGATGGAGTCCCAGGTCAAGAAAGACCCAAGGGTCCCTCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp CCCCTGGATTTGCTCTTGGCAGCTCACATCTGTCACCTTGGCAGGTaGTTCAGTAACAGTAGAAGCCTTGACTGTGCTTATCTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: PLDLLLAAHICHLGR*FSNSRSLDCAYLVF
Trigger: GAAAACAAGATAAGCACAGTCAAGGCTTCTACTGTTACTGAACCACCTGCCAAGGTGACAGATGTGAGCTGCCAAGAGCAAATCCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp CAGGGAGACATACCAGTCTGGATAGGATCGACCACTTGCTCAGGTTaGAAACAAAAGTTGGTATCTTCTGGCCAGTTCTGGCTATTTGGG +
Preference number: 5 (lower is better)
Translates to: QGDIPVWIGSTTCSG*KQKLVSSGQFWLFG
Trigger: CCCAAATAGCCAGAACTGGCCAGAAGATACCAACTTTTGTTTCCAACCTGAGCAAGTGGTCGATCCTATCCAGACTGGTATGTCTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423088.5
CDS-3UTR CAA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCTTTGCAGTCATCTTCTaGACTTCTGCAGGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPFAVIF*TSAGFP
Trigger: GGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAA...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCGGGACATGCTTAATATaGTCCTTGGAACCACACTTG +
Preference number: 5 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPGTCLI*SLEPHL
Trigger: CAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCC...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
CDS-3UTR CAA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCCCACCAGGCTTGTGCTaGATGTTAGCCTTAGACCCA +
Preference number: 5 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCPPGLC*MLALDP
Trigger: TGGGTCTAAGGCTAACATCAAGCACAAGCCTGGTGG...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp AGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTATCTCCTCCACCAGGCTaGTGCTTGATGTTAGCCTTA +
Preference number: 5 (lower is better)
Translates to: RTASLHMEIKSKLRSRPLSPPPG*CLMLAL
Trigger: TAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGA...TAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp TTCTTCCTGCTGACAAAACACTGGCTCCCTCATGTTCTTGGCACAGCAGAAGTGCATTATTTCCAATGCTaGTGCTGGTGGCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: FFLLTKHWLPHVLGTAEVHYFQC*CWWPLF
Trigger: GAAGAGAGGCCACCAGCACAAGCATTGGAAATAATG...CACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GTTTCCTGGTGTGTGCTTGGGGAGCTAGGGACATGGTGTCAAACCTCCACAAGGTTGCTTATGTCTCTCTaGTTCCTGGATTGTAGACTT +
Preference number: 5 (lower is better)
Translates to: VSWCVLGELGTWCQTSTRLLMSL*FLDCRL
Trigger: AAGTCTACAATCCAGGAACAAGAGAGACATAAGCAA...CCTTGTGGAGGTTTGACACCATGTCCCTAGCTCCCCAAGCACACACCAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CTCCAGAGAAGCCCTTGGAATCTCCCAGGCCATTTCACTACAAACTTATGTTTGACCTACCCCCAACCTTaGGCCAAAGGAGTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: LQRSPWNLPGHFTTNLCLTYPQP*AKGVKG
Trigger: TCCTTTCACTCCTTTGGCCAAAGGTTGGGGGTAGGT...CAAACATAAGTTTGTAGTGAAATGGCCTGGGAGATTCCAAGGGCTTCTCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000429422.5
CDS-3UTR CAA 90 bp CTCCCTCATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGGGAAACTCCTTCAGTTaGACATTCTGCAGTTTAGTC +
Preference number: 5 (lower is better)
Translates to: LPHVLGTAEVFCTWSLRRGNSFS*TFCSLV
Trigger: GACTAAACTGCAGAATGTCAAACTGAAGGAGTTTCC...CCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp CCTGTAGAAGAGGGAATGCTTCCTAAATTCCGGAAGTCGCTGCAAGGATTCAGTGAGGAAGCAGGTTGTTaGCTCAGGCATCAGCAGAAA +
Preference number: 5 (lower is better)
Translates to: PVEEGMLPKFRKSLQGFSEEAGC*LRHQQK
Trigger: TTTCTGCTGATGCCTGAGCAAACAACCTGCTTCCTC...ACTGAATCCTTGCAGCGACTTCCGGAATTTAGGAAGCATTCCCTCTTCTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS TCA 90 bp TGGCTGGGGAGAACACCTGATTTTTGTGTGTCAGCTGCAAATGGATaGCCTTTAGGCTTATCTGCATTGTCATCATCCGAAGGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: WLGRTPDFCVSAANG*PLGLSALSSSEGPP
Trigger: TGGAGGACCTTCGGATGATGACAATGCAGATAAGCCTAAAGGTCATCCATTTGCAGCTGACACACAAAAATCAGGTGTTCTCCCCAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 90 bp CCTGGTTGCTTTGAAGAATTCAGCCCCAGCTCCTCACTCTTATCCTaGGTAGTCATTCCTTCAGTTTTAGAGACTGGCTCACTCGGTATG +
Preference number: 5 (lower is better)
Translates to: PGCFEEFSPSSSLLS*VVIPSVLETGSLGM
Trigger: CATACCGAGTGAGCCAGTCTCTAAAACTGAAGGAATGACTACTCAGGATAAGAGTGAGGAGCTGGGGCTGAATTCTTCAAAGCAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS GCA 90 bp AGGTTGTTTCTGTGCACTTGCAATTGGGCCGGCTGTTTTAGTGACTaGATTAGATTCAGGCTTTCGGGTTGTAGCAGCTGCCTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: RLFLCTCNWAGCFSD*IRFRLSGCSSCLCF
Trigger: AAAACAGAGGCAGCTGCTACAACCCGAAAGCCTGAATCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAGAAACAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS GCA 90 bp TTTGGAGACTATCTGGACTTTCCCCGCAGGTTGTTTCTGTGCACTTaGAATTGGGCCGGCTGTTTTAGTGACTGCATTAGATTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: FGDYLDFPRRLFLCT*NWAGCFSDCIRFRL
Trigger: AAGCCTGAATCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAGAAACAACCTGCGGGGAAAGTCCAGATAGTCTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS GCA 90 bp TGCTTAGACGCACCACTGTGCACTGACTCAGATTCTCCTATCACATaGCCTTCATCGATCCCTGCTTCATTTTTCATGGAATCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: CLDAPLCTDSDSPIT*PSSIPASFFMESAS
Trigger: GCTTGCTGATTCCATGAAAAATGAAGCAGGGATCGATGAAGGGCATGTGATAGGAGAATCTGAGTCAGTGCACAGTGGTGCGTCTAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp CTTGTTCTGCTCCAGGAAGCTGGCATTCTTCACAAGCCCATCTTTTaGTTGCCCGTCCATGCTGACATTCAGCCCAATTTCATTCAGTTT +
Preference number: 5 (lower is better)
Translates to: LVLLQEAGILHKPIF*LPVHADIQPNFIQF
Trigger: AAACTGAATGAAATTGGGCTGAATGTCAGCATGGACGGGCAACCAAAAGATGGGCTTGTGAAGAATGCCAGCTTCCTGGAGCAGAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CCA 90 bp TTGAGAGGGCCTACTGACTGGCTTTTATCTACAGGAGTCTTCAGGTaGGGTGCAGGCTGTGGTTTGTATTCATGTTGCTTCAGCAATTTC +
Preference number: 5 (lower is better)
Translates to: LRGPTDWLLSTGVFR*GAGCGLYSCCFSNF
Trigger: GAAATTGCTGAAGCAACATGAATACAAACCACAGCCTGCACCCCACCTGAAGACTCCTGTAGATAAAAGCCAGTCAGTAGGCCCTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp CTCTTAAATGGTTCATTCTCTACCCCAGGGACCTGTACCAACACTTaGCCCTGCAGCTGCTCAGAAGTAAAGATGCTGATCTCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: LLNGSFSTPGTCTNT*PCSCSEVKMLISCL
Trigger: AAGACAAGAGATCAGCATCTTTACTTCTGAGCAGCTGCAGGGCCAAGTGTTGGTACAGGTCCCTGGGGTAGAGAATGAACCATTTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp CGGTATGAGAACAGCCCTTCCGTCCTTCTGGCTGTCCAGAAGAAATaGCAGCTCAGATTTTGCTTTTACCTTCCCAGAATCTGTTCTCAT +
Preference number: 5 (lower is better)
Translates to: RYENSPSVLLAVQKK*QLRFCFYLPRICSH
Trigger: ATGAGAACAGATTCTGGGAAGGTAAAAGCAAAATCTGAGCTGCCATTTCTTCTGGACAGCCAGAAGGACGGAAGGGCTGTTCTCATACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp AATGCTGAAGGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTaGTCTGGTGTTGCAGCAGCCCCAGTGTTGAGAGACACGCTAGGC +
Preference number: 5 (lower is better)
Translates to: NAEGFRSITMLRKDH*SGVAAAPVLRDTLG
Trigger: GCCTAGCGTGTCTCTCAACACTGGGGCTGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACCTTCAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CAA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCATCTGCAATGGGCTTaGTTTTCTTCTCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: MRIESGSPLLDPNLASTTHLQWA*FSSLGL
Trigger: CAAGCCCAGAGAAGAAAACAAAGCCCATTGCAGATG...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS-3UTR CAA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGGCTAGTGCCATGTCCTaGGCGAGGGCCATCTCTGTT +
Preference number: 5 (lower is better)
Translates to: TLTEDFHVDMASTCRTILASAMS*ARAISV
Trigger: AACAGAGATGGCCCTCGCCAAGGACATGGCACTAGC...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp AGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTAGGTAGTTCCATGTCCTaGACTAGGGCCATATCTGAT +
Preference number: 5 (lower is better)
Translates to: RTASLHMEIKSKLRSRPLGSSMS*TRAISD
Trigger: ATCAGATATGGCCCTAGTCAAGGACATGGAACTACC...TAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGGACGGAGCCACATCCTaGGCCGGGGCTATTTCTGTT +
Preference number: 5 (lower is better)
Translates to: TLTEDFHVDMASTCRTILDGATS*AGAISV
Trigger: AACAGAAATAGCCCCGGCCAAGGATGTGGCTCCGTC...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp GAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCCTTTTGGCTTTCGATGTaGAAGTCTTTGCAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: EDRIWFSSPRSQLSLNHPFWLSM*KSLQVE
Trigger: CTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAA...GGGGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCCATCTGCAATGGGCTTaGGCTTCACGTCTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: MRIESGSPLLDPNLASTTHLQWA*ASRLLK
Trigger: CTTCAAAAGACGTGAAGCCAAAGCCCATTGCAGATG...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTGCATGTCAGTTTCTTTaGGGTTTGGACCAAAGAACC +
Preference number: 5 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKAACQFL*GLDQRT
Trigger: GGTTCTTTGGTCCAAACCCAAAAGAAACTGACATGC...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp AGGACAGCCTCCCTGCACATGGAGATCAAATCTAAACTTAGGTCAAGACCCCTATCCAGCGGACTTCAGTaGCTTATGTCTCTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: RTASLHMEIKSKLRSRPLSSGLQ*LMSLLF
Trigger: GAACAAGAGAGACATAAGCAACTGAAGTCCGCTGGA...TAGGGGTCTTGACCTAAGTTTAGATTTGATCTCCATGTGCAGGGAGGCTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GTGACCACTATGGCAATACAGCATTTCATTATGGGACTGGCTACTTTGTATAAAGCAGCAGCCCCAGTGTaGAGAGACACGCTAGGCTTC +
Preference number: 5 (lower is better)
Translates to: VTTMAIQHFIMGLATLYKAAAPV*RDTLGF
Trigger: GAAGCCTAGCGTGTCTCTCAACACTGGGGCTGCTGC...TTTATACAAAGTAGCCAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CAA 90 bp GTACACAACGGAAAGTCATACCCAGGCTTCTCCACCCATAACTTAGACAGCTACCTGACTAAATGCATTTaGGATCAGGCACCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: VHNGKSYPGFSTHNLDSYLTKCI*DQAPAF
Trigger: GAAGGCAGGTGCCTGATCCAAAATGCATTTAGTCAG...GTAGCTGTCTAAGTTATGGGTGGAGAAGCCTGGGTATGACTTTCCGTTGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434267.5
CDS TCA 90 bp AGGAATTCAGTTGGAGACCCTGTAGTATCGCTCCCTTCTACTCCATaGCCACCATTGGCTAGGAGTGTTGGTTTAGAAGATGGAGTATCT +
Preference number: 5 (lower is better)
Translates to: RNSVGDPVVSLPSTP*PPLARSVGLEDGVS
Trigger: AGATACTCCATCTTCTAAACCAACACTCCTAGCCAATGGTGGTCATGGAGTAGAAGGGAGCGATACTACAGGGTCTCCAACTGAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000683076.1
CDS TCA 90 bp AGGAATTCAGTTGGAGACCCTGTAGTATCGCTCCCTTCTACTCCATaGCCACCATTGGCTAGGAGTGTTGGTTTAGAAGATGGAGTATCA +
Preference number: 5 (lower is better)
Translates to: RNSVGDPVVSLPSTP*PPLARSVGLEDGVS
Trigger: TGATACTCCATCTTCTAAACCAACACTCCTAGCCAATGGTGGTCATGGAGTAGAAGGGAGCGATACTACAGGGTCTCCAACTGAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000633710.1
CDS TCA 90 bp TCCATATTCTGTACCCATAGTGGTAGGCTGGCTGGGGAGAACACCTaGTTTTTGTGTGTCAGCTGCAAATGGATGACCTTTAGGCTTATC +
Preference number: 5 (lower is better)
Translates to: SIFCTHSGRLAGENT*FLCVSCKWMTFRLI
Trigger: GATAAGCCTAAAGGTCATCCATTTGCAGCTGACACACAAAAATCAGGTGTTCTCCCCAGCCAGCCTACCACTATGGGTACAGAATATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 90 bp AGTGTATCTATTGGCTGCATCTGTCTTATTCTCCTCAGATACTACTaGAGGAACAAATCCTGCCCCCTGGATTTGCTCTTGGCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: SVSIGCICLILLRYY*RNKSCPLDLLLAAH
Trigger: GTGAGCTGCCAAGAGCAAATCCAGGGGGCAGGATTTGTTCCTTCAGTAGTATCTGAGGAGAATAAGACAGATGCAGCCAATAGATACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS GCA 90 bp CTAAAATCTTCCTGCCCTTTTTCCTTGCTGCTTCCTTCAGGAATCTaGTCCAGCTTACTATGGAGATATAATCCAGCAGTGCCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: LKSSCPFSLLLPSGI*SSLLWRYNPAVPSS
Trigger: GGAACTCGGCACTGCTGGATTATATCTCCATAGTAAGCTGGAGCAGATTCCTGAAGGAAGCAGCAAGGAAAAAGGGCAGGAAGATTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335271.9
ENST00000420772.6
ENST00000497735.1
CDS GCA 90 bp CCTGTGACGGTTTCTGGTGAAATCATGAAAGTAGGTGCAGCTGACTaGCCCACATCCTGCAGAGATTCTAAATGGGAATCCTCACTTATT +
Preference number: 5 (lower is better)
Translates to: PVTVSGEIMKVGAAD*PTSCRDSKWESSLI
Trigger: AATAAGTGAGGATTCCCATTTAGAATCTCTGCAGGATGTGGGGCAGTCAGCTGCACCTACTTTCATGATTTCACCAGAAACCGTCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp AGGATCGACCACTTGCTCAGGTTGGAAACAAAAGTTGGTATCTTCTaGCCAGTTCTGGCTATTTGGGTATTCCTGGTAGGCCATTTTCTC +
Preference number: 5 (lower is better)
Translates to: RIDHLLRLETKVGIF*PVLAIWVFLVGHFL
Trigger: GAGAAAATGGCCTACCAGGAATACCCAAATAGCCAGAACTGGCCAGAAGATACCAACTTTTGTTTCCAACCTGAGCAAGTGGTCGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp GTGTCTCCAAAATCTTATCTTTGGGTTCTGGGAGTCGAACACCCTTaGAAGCAGTCATTATTACTAACGTATCCGCCACCTCTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: VSPKSYLWVLGVEHP*KQSLLLTYPPPLKE
Trigger: CTCCTTCAGAGGTGGCGGATACGTTAGTAATAATGACTGCTTCCAAGGGTGTTCGACTCCCAGAACCCAAAGATAAGATTTTGGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CCA 90 bp GGACTTCAGTTGCTTATGTCTCTCTTGTTCCTGGATTGTAGACTTTaGCAAAAGTGGAGTAAGTCCTCGGGACTTGGTGGGTCTCATGTA +
Preference number: 5 (lower is better)
Translates to: GLQLLMSLLFLDCRL*QKWSKSSGLGGSHV
Trigger: TACATGAGACCCACCAAGTCCCGAGGACTTACTCCACTTTTGCCAAAGTCTACAATCCAGGAACAAGAGAGACATAAGCAACTGAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS-3UTR CAA 90 bp CTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTCCGTGGAGCCAACCTaGGAGCGGACATTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: LTLTEDFHVDMASTCRTISVEPT*ERTFFR
Trigger: TCTGAAGAATGTCCGCTCCAAGGTTGGCTCCACGGA...AATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp ATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACCACCGGCAGTACCACATTCTaGGCTGAAGATACATCTGTT +
Preference number: 5 (lower is better)
Translates to: MRIESGSPLLDPNLASTTGSTTF*AEDTSV
Trigger: AACAGATGTATCTTCAGCCAAGAATGTGGTACTGCC...GGTGGTTGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCACTGGATTTCTGGTGTaGGCAAGGAAACGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCTGFLV*ARKRFP
Trigger: TGGAAAGCGTTTCCTTGCCAACACCAGAAATCCAGT...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS TCA 90 bp TGCAATTTCCATGTCTTTAATTGGAACTGGTGTTGCCTCTGTTTCTaGGAGTGGTGGAACATCTTTGGCTGGAGTCACATTGTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: CNFHVFNWNWCCLCF*EWWNIFGWSHIVGQ
Trigger: CTGGCCAACAATGTGACTCCAGCCAAAGATGTTCCACCACTCTCAGAAACAGAGGCAACACCAGTTCCAATTAAAGACATGGAAATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS TCA 90 bp TCTGGCCTGGCTATTCCTGAGGTCTCTGAAGAAAGCTCAGAAGGTTaGCTGTTGCATGGTTTCCTTTCCCCTAGTTTTTCTAACACAGAA +
Preference number: 5 (lower is better)
Translates to: SGLAIPEVSEESSEG*LLHGFLSPSFSNTE
Trigger: TTCTGTGTTAGAAAAACTAGGGGAAAGGAAACCATGCAACAGTCAACCTTCTGAGCTTTCTTCAGAGACCTCAGGAATAGCCAGGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000395734.7
CDS TCA 90 bp GCTCCTGGAGCTCTAATACCACCTACGATCACACAGAGCTTGCAGTaGCATCACACCAATTCCCCAGTATTCATGACAAAATTCATCTCT +
Preference number: 5 (lower is better)
Translates to: APGALIPPTITQSLQ*HHTNSPVFMTKFIS
Trigger: AGAGATGAATTTTGTCATGAATACTGGGGAATTGGTGTGATGTCACTGCAAGCTCTGTGTGATCGTAGGTGGTATTAGAGCTCCAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS CCA 90 bp TTGCTTATGTCTCTCTTGTTCCTGGATTGTAGACTTTGGCAAAAGTaGAGTAAGTCCTCGGGACTTGGTGGGTCTCATGTAGCCTTTCAT +
Preference number: 5 (lower is better)
Translates to: LLMSLLFLDCRLWQK*SKSSGLGGSHVAFH
Trigger: ATGAAAGGCTACATGAGACCCACCAAGTCCCGAGGACTTACTCCACTTTTGCCAAAGTCTACAATCCAGGAACAAGAGAGACATAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS-3UTR CAA 90 bp TTCTTCCTGCTGACAAAACACTGGCTCCCTCATGTTCTTGGCACAGCAGAAGTGTTGCTTATGTCTCTCTaGTTCCTGGATTGTAGACTT +
Preference number: 5 (lower is better)
Translates to: FFLLTKHWLPHVLGTAEVLLMSL*FLDCRL
Trigger: AAGTCTACAATCCAGGAACAAGAGAGACATAAGCAA...CACTTCTGCTGTGCCAAGAACATGAGGGAGCCAGTGTTTTGTCAGCAGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS TCA 90 bp CATACCGTAACTGTCTTTCAAGGGATCATTTTGTCCTGCAAATATTaGAGTATCAGCTGTCGCACTGGAGGGAAAGACCAAATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: HTVTVFQGIILSCKY*SISCRTGGKDQICQ
Trigger: CTGGCAGATTTGGTCTTTCCCTCCAGTGCGACAGCTGATACTTCAATATTTGCAGGACAAAATGATCCCTTGAAAGACAGTTACGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS TCA 90 bp TTTCTACATTGTATGCAGAAACTTCTGCTAGGGGTCCTTTCAGATTaGGAGGGCCTACTGACTGGCTTTTATCTACAGGAGTCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: FLHCMQKLLLGVLSD*EGLLTGFYLQESSG
Trigger: ACCTGAAGACTCCTGTAGATAAAAGCCAGTCAGTAGGCCCTCTCAATCTGAAAGGACCCCTAGCAGAAGTTTCTGCATACAATGTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS GCA 90 bp TGGCTATTCCTGAGGTCTCTGAAGAAAGCTCAGAAGGTTGACTGTTaGATGGTTTCCTTTCCCCTAGTTTTTCTAACACAGAATCCTCCT +
Preference number: 5 (lower is better)
Translates to: WLFLRSLKKAQKVDC*MVSFPLVFLTQNPP
Trigger: AGGAGGATTCTGTGTTAGAAAAACTAGGGGAAAGGAAACCATGCAACAGTCAACCTTCTGAGCTTTCTTCAGAGACCTCAGGAATAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000395734.7
CDS CCA 90 bp AGGGATCATTTTGTCCTGCAAATATTGAAGTATCAGCTGTCGCACTaGAGGGAAAGACCAAATCTGCCAGGTCATCATCATGGTACATCT +
Preference number: 5 (lower is better)
Translates to: RDHFVLQILKYQLSH*RERPNLPGHHHGTS
Trigger: AGATGTACCATGATGATGACCTGGCAGATTTGGTCTTTCCCTCCAGTGCGACAGCTGATACTTCAATATTTGCAGGACAAAATGATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000482752.1
ENST00000683076.1
CDS CCA 90 bp ACCTCTGAAGGAGGAGCTTCGACTTTGCTATGTAAGAAATCTGACTaGATTTCTGGTGTTGGCAAGGAAACGCTTTCCAATTCCGTGATT +
Preference number: 5 (lower is better)
Translates to: TSEGGASTLLCKKSD*ISGVGKETLSNSVI
Trigger: AATCACGGAATTGGAAAGCGTTTCCTTGCCAACACCAGAAATCCAGTCAGATTTCTTACATAGCAAAGTCGAAGCTCCTCCTTCAGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS-3UTR CAA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCAAGCACGGTTTCTTCTTaGACTCTGAGTTCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: GFRSITMLRKDHWSGVAASTVSS*TLSSRF
Trigger: AAACCGGGAACTCAGAGTCAAAGAAGAAACCGTGCT...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CAA 90 bp CACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGCAAGAGAGCACGGTTTCTTCTTaGACTCTGAGTTCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: HQRERVVFSLMVYSLWQESTVSS*TLSSRF
Trigger: AAACCGGGAACTCAGAGTCAAAGAAGAAACCGTGCT...CTCTTGCCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CAA 90 bp AAATTTCCAGACCTGATTTCCTACTATCTGCATGAGGCTCCCTTGGACATGAGGTTTGTCCTGCAAATATaGAAGTATCAGCTGTCGCAC +
Preference number: 5 (lower is better)
Translates to: KFPDLISYYLHEAPLDMRFVLQI*KYQLSH
Trigger: GTGCGACAGCTGATACTTCAATATTTGCAGGACAAA...CCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp AAATTTCCAGACCTGATTTCCTACTATCTGCATGAGGCTCCCTTGGACATGAGGTTTTGGCTTTCGATGTaGAAGTCTTTGCAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: KFPDLISYYLHEAPLDMRFWLSM*KSLQVE
Trigger: CTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAA...CCTCATGTCCAAGGGAGCCTCATGCAGATAGTAGGAAATCAGGTCTGGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp CATGTTCTTGGCACAGCAGAAGTGTTCTGCACATGGTCTCTACGGAGGAAAGCTTTTGGAATTTCTATCTaGAGCATTTTGGTCCTCACA +
Preference number: 5 (lower is better)
Translates to: HVLGTAEVFCTWSLRRKAFGISI*SILVLT
Trigger: TGTGAGGACCAAAATGCTCAAGATAGAAATTCCAAA...AGCTTTCCTCCGTAGAGACCATGTGCAGAACACTTCTGCTGTGCCAAGAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp GTGACCACTATGGCAATACAGCATTTCATTATGGGACTGGCTACTTTGTATAAAGAGATACTGGACCACTaGGGTGTGACCACTATGGCA +
Preference number: 5 (lower is better)
Translates to: VTTMAIQHFIMGLATLYKEILDH*GVTTMA
Trigger: TGCCATAGTGGTCACACCCAAGTGGTCCAGTATCTC...TTTATACAAAGTAGCCAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS TCA 90 bp ATATCTTTGACTACATCTCCTGTTTCTGTGCTAACACCAGAAGTCTaGGTCATGCCTGATCCACTTTCCAAAGGAATCAATGCCTGCATG +
Preference number: 5 (lower is better)
Translates to: ISLTTSPVSVLTPEV*VMPDPLSKGINACM
Trigger: CATGCAGGCATTGATTCCTTTGGAAAGTGGATCAGGCATGACTCAGACTTCTGGTGTTAGCACAGAAACAGGAGATGTAGTCAAAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 90 bp ACCCTTCCTGTCAACTGCTTCCACTGTGGGTGTATCTGGTGTATGTaGGAACGAAGAATCATGCATTTTGGGGAAAGTAAATCCTATTTC +
Preference number: 5 (lower is better)
Translates to: TLPVNCFHCGCIWCM*ERRIMHFGESKSYF
Trigger: GAAATAGGATTTACTTTCCCCAAAATGCATGATTCTTCGTTCTCACATACACCAGATACACCCACAGTGGAAGCAGTTGACAGGAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 90 bp TATTCCGTAACTGTCTTTCAAGGGATCATTTTGTCCTGCAAATATTaGAGTATCAGCTGTCGCACTGGAGGGAAAGACCAAATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: YSVTVFQGIILSCKY*SISCRTGGKDQICQ
Trigger: CTGGCAGATTTGGTCTTTCCCTCCAGTGCGACAGCTGATACTTCAATATTTGCAGGACAAAATGATCCCTTGAAAGACAGTTACGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482752.1
CDS GCA 90 bp TCTGGTGAAATCATGAAAGTAGGTGCAGCTGACTGCCCCACATCCTaGAGAGATTCTAAATGGGAATCCTCACTTATTCCTTTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: SGEIMKVGAADCPTS*RDSKWESSLIPFCV
Trigger: AACACAAAAAGGAATAAGTGAGGATTCCCATTTAGAATCTCTGCAGGATGTGGGGCAGTCAGCTGCACCTACTTTCATGATTTCACCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS GCA 90 bp TTATTACTAACGTATCCGCCACCTCTGAAGGAGGAGCTTCGACTTTaGTATGTAAGAAATCTGACTGGATTTCTGGTGTTGGCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: LLLTYPPPLKEELRL*YVRNLTGFLVLARK
Trigger: TTTCCTTGCCAACACCAGAAATCCAGTCAGATTTCTTACATAGCAAAGTCGAAGCTCCTCCTTCAGAGGTGGCGGATACGTTAGTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS GCA 90 bp ACTCAATTTCTCCAACTCCTTATCATGGTCTCTGATGTGACAGCTTaGATTCAAATGTTCCTGGGTGAACACCATAGTGATTGGCGGAAT +
Preference number: 5 (lower is better)
Translates to: TQFLQLLIMVSDVTA*IQMFLGEHHSDWRN
Trigger: ATTCCGCCAATCACTATGGTGTTCACCCAGGAACATTTGAATGCAAGCTGTCACATCAGAGACCATGATAAGGAGTTGGAGAAATTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS GCA 90 bp TCTAATAGGAACTATCCAGGCAGCTTGTGTTCAGTCCTGACTAAATaGATTTTGGATCAGGCACCTGCCTTCAACATTTCTGTCCAAATG +
Preference number: 5 (lower is better)
Translates to: SNRNYPGSLCSVLTK*ILDQAPAFNISVQM
Trigger: CATTTGGACAGAAATGTTGAAGGCAGGTGCCTGATCCAAAATGCATTTAGTCAGGACTGAACACAAGCTGCCTGGATAGTTCCTATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633710.1
CDS CCA 90 bp AGGTTGGAAACAAAAGTTGGTATCTTCTGGCCAGTTCTGGCTATTTaGGTATTCCTGGTAGGCCATTTTCTCTTCAAGGAATTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: RLETKVGIFWPVLAI*VFLVGHFLFKEFSW
Trigger: CCAACTGAATTCCTTGAAGAGAAAATGGCCTACCAGGAATACCCAAATAGCCAGAACTGGCCAGAAGATACCAACTTTTGTTTCCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS-3UTR CAA 90 bp CTGTTCCCTCTAACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGTGTCACATCTAATTaGGTGGGTGATTCCATATCT +
Preference number: 5 (lower is better)
Translates to: LFPLTLTEDFHVDMASTCSVTSN*VGDSIS
Trigger: AGATATGGAATCACCCACCAAATTAGATGTGACACT...GCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGTTAGAGGGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAGGTAGTGCTTTATCCTaGGTCAAGATCACGTTGGTT +
Preference number: 5 (lower is better)
Translates to: KKMRIESGSPLLDPNLASGSALS*VKITLV
Trigger: AACCAACGTGATCTTGACCAAGGATAAAGCACTACC...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS-3UTR CAA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGAGTGGTGGAACATCTTaGGCTGGAGTCACATTGTTG +
Preference number: 5 (lower is better)
Translates to: TLTEDFHVDMASTCRTILSGGTS*AGVTLL
Trigger: CAACAATGTGACTCCAGCCAAAGATGTTCCACCACT...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
CDS TCA 90 bp TCGGTAGAACTCAATTTCTCCAACTCCTTATCATGGTCTCTGATGTaGCAGCTTGCATTCAAATGTTCCTGGGTGAACACCATAGTGATT +
Preference number: 5 (lower is better)
Translates to: SVELNFSNSLSWSLM*QLAFKCSWVNTIVI
Trigger: AATCACTATGGTGTTCACCCAGGAACATTTGAATGCAAGCTGTCACATCAGAGACCATGATAAGGAGTTGGAGAAATTGAGTTCTACCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS-3UTR CAA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGGGGACATGCTTAATATaGTCCTTGGAACCACACTTG +
Preference number: 5 (lower is better)
Translates to: TLTEDFHVDMASTCRTILGTCLI*SLEPHL
Trigger: CAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCC...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
CDS-3UTR CAA 90 bp AAAAAGATGAGGATAGAATCTGGTTCTCCTCTCCTAGATCCCAACTTAGCCTCAACTGCAGTGTATCTATaGGCTGCATCTGTCTTATTC +
Preference number: 5 (lower is better)
Translates to: KKMRIESGSPLLDPNLASTAVYL*AASVLF
Trigger: GAATAAGACAGATGCAGCCAATAGATACACTGCAGT...TGAGGCTAAGTTGGGATCTAGGAGAGGAGAACCAGATTCTATCCTCATCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426837.6
CDS-3UTR CAA 90 bp GGTTTTAGAAGTATAACGATGCTTAGGAAAGATCACTGGTCTGGTGTTGCAGCAGAAATAATCTGTACCTaGGGGGTTATAAGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GFRSITMLRKDHWSGVAAEIICT*GVIRSC
Trigger: GCAGCTTCTTATAACCCCCAAGGTACAGATTATTTC...TGCTGCAACACCAGACCAGTGATCTTTCCTAAGCATCGTTATACTTCTAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS-3UTR CAA 90 bp ACTGTACACCAAAGGGAAAGGGTTGTGTTTTCTTTGATGGTGTATTCTCTATGGAACTATCCAGGCAGCTaGTGTTCAGTCCTGACTAAA +
Preference number: 5 (lower is better)
Translates to: TVHQRERVVFSLMVYSLWNYPGS*CSVLTK
Trigger: TTTAGTCAGGACTGAACACAAGCTGCCTGGATAGTT...CCATAGAGAATACACCATCAAAGAAAACACAACCCTTTCCCTTTGGTGTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434267.5
CDS CCA 90 bp ATTTCTTTTGCTGCTGTGGGTTTTGAAACTACACCCATAACCTCTTaGTCCAAGAAAGGAGAGCAACCCTCTTTAAGTCTGATATCCAAA +
Preference number: 5 (lower is better)
Translates to: ISFAAVGFETTPITS*SKKGEQPSLSLISK
Trigger: TTTGGATATCAGACTTAAAGAGGGTTGCTCTCCTTTCTTGGACCAAGAGGTTATGGGTGTAGTTTCAAAACCCACAGCAGCAAAAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS-3UTR CAA 90 bp ACACTTACTGAGGACTTTCATGTAGACATGGCTTCAACCTGCAGAACTATTTTGTCATGTAGCCTTTCATaGGTTCTGCCATTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: TLTEDFHVDMASTCRTILSCSLS*VLPFCF
Trigger: AAAGCAGAATGGCAGAACCAATGAAAGGCTACATGA...CAAAATAGTTCTGCAGGTTGAAGCCATGTCTACATGAAAGTCCTCAGTAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000429422.5
CDS-3UTR CAA 90 bp GTGACCACTATGGCAATACAGCATTTCATTATGGGACTGGCTACTTTGTATAAAGAAATAATCTGTACCTaGGGGGTTATAAGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: VTTMAIQHFIMGLATLYKEIICT*GVIRSC
Trigger: GCAGCTTCTTATAACCCCCAAGGTACAGATTATTTC...TTTATACAAAGTAGCCAGTCCCATAATGAAATGCTGTATTGCCATAGTGGTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS GCA 90 bp TTTACTTTTTCCATCATTACTCCTTTTACTTGGTTTGTCAGCCACTaGAGTGTATCTATTGGCTGCATCTGTCTTATTCTCCTCAGATAC +
Preference number: 5 (lower is better)
Translates to: FTFSIITPFTWFVSH*SVSIGCICLILLRY
Trigger: GTATCTGAGGAGAATAAGACAGATGCAGCCAATAGATACACTGCAGTGGCTGACAAACCAAGTAAAAGGAGTAATGATGGAAAAAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 90 bp AAATGCACTTACAAATGTGAAAGAAAGAAAGAAAGGAAGAATGAATaGAAGCGAAAGAAAGGAAGGAACCTGCTGCTTTCTGCACAACAA +
Preference number: 5 (lower is better)
Translates to: KCTYKCERKKERKNE*KRKKGRNLLLSAQQ
Trigger: TTGTTGTGCAGAAAGCAGCAGGTTCCTTCCTTTCTTTCGCTTTCATTCATTCTTCCTTTCTTTCTTTCTTTCACATTTGTAAGTGCATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS CAA 90 bp CCGGAGGGGCGGGGCGCAGGGAGGCGGCCGCTTCCTCGTCGCCTCTaGAGGGCCGGCGCAAGGGAGGGACGCCGCCACCGCCTACCCGGC +
Preference number: 6 (lower is better)
Translates to: PEGRGAGRRPLPRRL*RAGAREGRRHRLPG
Trigger: GCCGGGTAGGCGGTGGCGGCGTCCCTCCCTTGCGCCGGCCCTCAAGAGGCGACGAGGAAGCGGCCGCCTCCCTGCGCCCCGCCCCTCCGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS TCA 72 bp GGGGCGCAGGGAGGCGGCCGCTTCCTCGTCGCCTCTTaGGGGCCGGCGCAAGGGAGGGACGCCGCCACCGCC +
Preference number: 6 (lower is better)
Translates to: GAQGGGRFLVAS*GPAQGRDAATA
Trigger: GGCGGTGGCGGCGTCCCTCCCTTGCGCCGGCCCTCAAGAGGCGACGAGGAAGCGGCCGCCTCCCTGCGCCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS CAA 72 bp CGGGGCGCAGGGAGGCGGCCGCTTCCTCGTCGCCTCTaGAGGGCCGGCGCAAGGGAGGGACGCCGCCACCGC +
Preference number: 6 (lower is better)
Translates to: RGAGRRPLPRRL*RAGAREGRRHR
Trigger: GCGGTGGCGGCGTCCCTCCCTTGCGCCGGCCCTCAAGAGGCGACGAGGAAGCGGCCGCCTCCCTGCGCCCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS GCA 72 bp GGTGCTGGCCCTGCCGCCACGACGTCTCTGCAGAGCTaGCCGAGCCGCGGGCGGTTGGGGCGAGGTGCGCCT +
Preference number: 6 (lower is better)
Translates to: GAGPAATTSLQS*PSRGRLGRGAP
Trigger: AGGCGCACCTCGCCCCAACCGCCCGCGGCTCGGGCAGCTCTGCAGAGACGTCGTGGCGGCAGGGCCAGCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000468075.2
CDS GCA 72 bp GACCAATGGGTGCTGGCCCTGCCGCCACGACGTCTCTaGAGAGCTGCCCGAGCCGCGGGCGGTTGGGGCGAG +
Preference number: 6 (lower is better)
Translates to: DQWVLALPPRRL*RAARAAGGWGE
Trigger: CTCGCCCCAACCGCCCGCGGCTCGGGCAGCTCTGCAGAGACGTCGTGGCGGCAGGGCCAGCACCCATTGGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000468075.2
CDS CCA 72 bp GGGGAGGGCGGAGGGCTGTGGCGGACCAATGGGTGCTaGCCCTGCCGCCACGACGTCTCTGCAGAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: GEGGGLWRTNGC*PCRHDVSAELP
Trigger: GGGCAGCTCTGCAGAGACGTCGTGGCGGCAGGGCCAGCACCCATTGGTCCGCCACAGCCCTCCGCCCTCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000468075.2
CDS GCA 72 bp CCTGGGGGCTCTAGCCTCCCGCCTGCGGCCTGCGAATaGCGAAGCGGACCGCAGGCCGATCGACTGCCTTCG +
Preference number: 6 (lower is better)
Translates to: PGGSSLPPAACE*RSGPQADRLPS
Trigger: CGAAGGCAGTCGATCGGCCTGCGGTCCGCTTCGGCATTCGCAGGCCGCAGGCGGGAGGCTAGAGCCCCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000468075.2
CDS GCA 72 bp GAGGGGGAGGGCGGAGGGCTGTGGCGGACCAATGGGTaGTGGCCCTGCCGCCACGACGTCTCTGCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: EGEGGGLWRTNG*WPCRHDVSAEL
Trigger: CAGCTCTGCAGAGACGTCGTGGCGGCAGGGCCAGCACCCATTGGTCCGCCACAGCCCTCCGCCCTCCCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000468075.2
CDS CCA 72 bp TGGCGAGGGGGAGGGCGGAGGGCTGTGGCGGACCAATaGGTGCTGGCCCTGCCGCCACGACGTCTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: WRGGGRRAVADQ*VLALPPRRLCR
Trigger: TCTGCAGAGACGTCGTGGCGGCAGGGCCAGCACCCATTGGTCCGCCACAGCCCTCCGCCCTCCCCCTCGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000468075.2
CDS TCA 72 bp GAGTTGTGGAGGGCCGGGAGGGCATGGGTGTGGCCTTaGCTCGGCTGGGAACCACCCCTGCAGCGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: ELWRAGRAWVWP*LGWEPPLQRGL
Trigger: CAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCTCCCGGCCCTCCACAACTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS GCA 72 bp CCCCAGCAGGGGGACCCGGACACAGAGGAGCCTCGCTaGCACCGCCCTCAGTCTTCACAGCACCTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: PQQGDPDTEEPR*HRPQSSQHLLQ
Trigger: CTGCAGGAGGTGCTGTGAAGACTGAGGGCGGTGGCAGCGAGGCTCCTCTGTGTCCGGGTCCCCCTGCTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS CAA 90 bp TCTATGAAAGGAGTTGTGGAGGGCCGGGAGGGCATGGGTGTGGCCTaGACTCGGCTGGGAACCACCCCTGCAGCGGGGGCTGTCCCACTG +
Preference number: 6 (lower is better)
Translates to: SMKGVVEGREGMGVA*TRLGTTPAAGAVPL
Trigger: CAGTGGGACAGCCCCCGCTGCAGGGGTGGTTCCCAGCCGAGTCAAGGCCACACCCATGCCCTCCCGGCCCTCCACAACTCCTTTCATAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS TCA 72 bp CGGACCGCAGGCCGATCGACTGCCTTCGCTGTTCTATaGTGGCCGTCGCTCTCTCTCAGAGTCTGGGCGCCC +
Preference number: 6 (lower is better)
Translates to: RTAGRSTAFAVL*WPSLSLRVWAP
Trigger: GGGCGCCCAGACTCTGAGAGAGAGCGACGGCCATCATAGAACAGCGAAGGCAGTCGATCGGCCTGCGGTCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360240.10
CDS CCA 72 bp CCCTGGCAGGCTTGGGCCGGGTTGACCTGCGGTCACTaGGTCTGCAAACTTGTTTGGCTTGTGTGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: PWQAWAGLTCGH*VCKLVWLVWEG
Trigger: CCCCTCCCACACAAGCCAAACAAGTTTGCAGACCCAGTGACCGCAGGTCAACCCGGCCCAAGCCTGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS GCA 72 bp CCTGCGAATGCCGAAGCGGACCGCAGGCCGATCGACTaGCTTCGCTGTTCTATGATGGCCGTCGCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: PANAEADRRPID*LRCSMMAVALS
Trigger: AGAGAGAGCGACGGCCATCATAGAACAGCGAAGGCAGTCGATCGGCCTGCGGTCCGCTTCGGCATTCGCAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000468075.2
CDS GCA 72 bp CAGGAGGGACCCTGGCAGGCTTGGGCCGGGTTGACCTaGGGTCACTGGGTCTGCAAACTTGTTTGGCTTGTG +
Preference number: 6 (lower is better)
Translates to: QEGPWQAWAGLT*GHWVCKLVWLV
Trigger: CACAAGCCAAACAAGTTTGCAGACCCAGTGACCGCAGGTCAACCCGGCCCAAGCCTGCCAGGGTCCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp GACTCAAGTCAGCAGTGGGCTTCTTGGGCAGGAGCGTaGAGGGGCTCCTACTGCTTGGGCCAGTTGAGGCAA +
Preference number: 6 (lower is better)
Translates to: DSSQQWASWAGA*RGSYCLGQLRQ
Trigger: TTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGCCCACTGCTGACTTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS CCA 72 bp AGAGCAGTGGCCCAGCCTGTGATCAAGAGTCTTCCATaGAGGAGAGCCTCCCAGCAGCTCAGGAGGGACCCT +
Preference number: 6 (lower is better)
Translates to: RAVAQPVIKSLP*RRASQQLRRDP
Trigger: AGGGTCCCTCCTGAGCTGCTGGGAGGCTCTCCTCCATGGAAGACTCTTGATCACAGGCTGGGCCACTGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp ACCGTACGCGGCAGTGAGAGAGGCTGTCTGCTTGTCTaGGAGCGACATCGTCTCTCCTCCACTGCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: TVRGSERGCLLV*ERHRLSSTALP
Trigger: AGGGAGAGCAGTGGAGGAGAGACGATGTCGCTCTCAGACAAGCAGACAGCCTCTCTCACTGCCGCGTACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 72 bp TCCATTCGGCACTCTGCAGGCTTGCCCTTACTGAGCTaGCCGTACGCGGCAGTGAGAGAGGCTGTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SIRHSAGLPLLS*PYAAVREAVCL
Trigger: CAAGCAGACAGCCTCTCTCACTGCCGCGTACGGTCAGCTCAGTAAGGGCAAGCCTGCAGAGTGCCGAATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CCA 72 bp CATTCAGACAGGGCCCTGCGCACTGCCTTTTTCTGCTaGGGGGCTTGGTTGAGCACAGCCTCCTCGGTAGAA +
Preference number: 6 (lower is better)
Translates to: HSDRALRTAFFC*GAWLSTASSVE
Trigger: TTCTACCGAGGAGGCTGTGCTCAACCAAGCCCCCCAGCAGAAAAAGGCAGTGCGCAGGGCCCTGTCTGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CCA 72 bp AGGAGCTCCCAGTTTCCCAGGTGTAGGACTAGGCATTaGGCTACTAGGGGGAGGCAGCAGGCCAGAAGAAGG +
Preference number: 6 (lower is better)
Translates to: RSSQFPRCRTRH*ATRGRQQARRR
Trigger: CCTTCTTCTGGCCTGCTGCCTCCCCCTAGTAGCCCAATGCCTAGTCCTACACCTGGGAAACTGGGAGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CAA 90 bp GCTTCTTGGGCAGGAGCGTGGAGGGGCTCCTACTGCTTGGGCCAGTaGAGGCAACAGCAGCAGCTGTTGTGGTTTTTGCAACAGTCTGAG +
Preference number: 6 (lower is better)
Translates to: ASWAGAWRGSYCLGQ*RQQQQLLWFLQQSE
Trigger: CTCAGACTGTTGCAAAAACCACAACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGCCCAAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
ENST00000462206.1
ENST00000683076.1
CDS CAA 90 bp GGCTTGGGCCGGGTTGACCTGCGGTCACTGGGTCTGCAAACTTGTTaGGCTTGTGTGGGAGGGGTACCGCAATACATGAAGTTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: GLGRVDLRSLGLQTC*ACVGGVPQYMKLAE
Trigger: CTCAGCCAACTTCATGTATTGCGGTACCCCTCCCACACAAGCCAAACAAGTTTGCAGACCCAGTGACCGCAGGTCAACCCGGCCCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp CCCATCCTTAGCCAGGGGTGCTTCTGTTTTGAGGGCTaGGACCTGATCCTCAGTCAGGGCCACCTCCATTTC +
Preference number: 6 (lower is better)
Translates to: PILSQGCFCFEG*DLILSQGHLHF
Trigger: GAAATGGAGGTGGCCCTGACTGAGGATCAGGTCCCAGCCCTCAAAACAGAAGCACCCCTGGCTAAGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp CCCTCTATGAGTCCCAGATGGAACTCGGAGGTCTTCTaGTGTACCGAGTTCCCCTCCAAGGGATGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: PSMSPRWNSEVF*CTEFPSKGWQV
Trigger: GACCTGCCATCCCTTGGAGGGGAACTCGGTACACCAGAAGACCTCCGAGTTCCATCTGGGACTCATAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CAA 72 bp GCAGGAGCGTGGAGGGGCTCCTACTGCTTGGGCCAGTaGAGGCAACAGCAGCAGCTGTTGTGGTTTTTGCAA +
Preference number: 6 (lower is better)
Translates to: AGAWRGSYCLGQ*RQQQQLLWFLQ
Trigger: TTGCAAAAACCACAACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCTCCACGCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
ENST00000462206.1
ENST00000683076.1
CDS TCA 72 bp AGACTATCTGGACCCGGCCTCCTCCAGGCTGATGCTTaGTGTTTTCCGTGGAGCCAACCTTGGAGCGGACAT +
Preference number: 6 (lower is better)
Translates to: RLSGPGLLQADA*CFPWSQPWSGH
Trigger: ATGTCCGCTCCAAGGTTGGCTCCACGGAAAACATCAAGCATCAGCCTGGAGGAGGCCGGGTCCAGATAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335271.9
ENST00000420772.6
CDS CCA 72 bp CAGCAGCCCCAGGGAAATCCAGATCTGACTGGCTCTTaGTCTCTAGTCCATTCTTCCCTGCCACCTTCCCCT +
Preference number: 6 (lower is better)
Translates to: QQPQGNPDLTGS*SLVHSSLPPSP
Trigger: AGGGGAAGGTGGCAGGGAAGAATGGACTAGAGACCAAGAGCCAGTCAGATCTGGATTTCCCTGGGGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CCA 72 bp ATGGTGGTGGGTGAATGCTCAATAATGGGGGCTGGGTaGGCTAGAGACACCAGGAGTGGGGACTCACACTTC +
Preference number: 6 (lower is better)
Translates to: MVVGECSIMGAG*ARDTRSGDSHF
Trigger: GAAGTGTGAGTCCCCACTCCTGGTGTCTCTAGCCCACCCAGCCCCCATTATTGAGCATTCACCCACCACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CAA 72 bp TCAGCAGCCCCAGGGAAATCCAGATCTGACTGGCTCTaGGTCTCTAGTCCATTCTTCCCTGCCACCTTCCCC +
Preference number: 6 (lower is better)
Translates to: SAAPGKSRSDWL*VSSPFFPATFP
Trigger: GGGGAAGGTGGCAGGGAAGAATGGACTAGAGACCAAGAGCCAGTCAGATCTGGATTTCCCTGGGGCTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CAA 90 bp AGGGGCTCCTACTGCTTGGGCCAGTTGAGGCAACAGCAGCAGCTGTaGTGGTTTTTGCAACAGTCTGAGTGCTCTTGGACCCAGATCTGG +
Preference number: 6 (lower is better)
Translates to: RGSYCLGQLRQQQQL*WFLQQSECSWTQIW
Trigger: CCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAACCACAACAGCTGCTGCTGTTGCCTCAACTGGCCCAAGCAGTAGGAGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
ENST00000462206.1
ENST00000683076.1
CDS TCA 72 bp GCAACAGCAGCAGCTGTTGTGGTTTTTGCAACAGTCTaGGTGCTCTTGGACCCAGATCTGGAGGCTGGGGCA +
Preference number: 6 (lower is better)
Translates to: ATAAAVVVFATV*VLLDPDLEAGA
Trigger: TGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAACCACAACAGCTGCTGCTGTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
ENST00000462206.1
ENST00000683076.1
CDS TCA 72 bp AGGGTACTTATCTGCAAGGTTGACAGCTGGGGGAACTaGGAGGTGAGAACATTCAGACAGGGCCCTGCGCAC +
Preference number: 6 (lower is better)
Translates to: RVLICKVDSWGN*EVRTFRQGPAH
Trigger: GTGCGCAGGGCCCTGTCTGAATGTTCTCACCTCTCAGTTCCCCCAGCTGTCAACCTTGCAGATAAGTACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS GCA 72 bp CAGCAGCAGCTGTTGTGGTTTTTGCAACAGTCTGAGTaGTCTTGGACCCAGATCTGGAGGCTGGGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: QQQLLWFLQQSE*SWTQIWRLGQK
Trigger: CTTCTGCCCCAGCCTCCAGATCTGGGTCCAAGAGCACTCAGACTGTTGCAAAAACCACAACAGCTGCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
ENST00000462206.1
ENST00000683076.1
CDS GCA 72 bp CTGAGAGCGACATCGTCTCTCCTCCACTGCTCTCCCTaGTTTCGCTCCTGGAGCTCTAATACCACCTACGAT +
Preference number: 6 (lower is better)
Translates to: LRATSSLLHCSP*FRSWSSNTTYD
Trigger: ATCGTAGGTGGTATTAGAGCTCCAGGAGCGAAAGCAGGGAGAGCAGTGGAGGAGAGACGATGTCGCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS GCA 72 bp TTGACTGATTTCTTTTGGGGAGTCCATTCGGCACTCTaGAGGCTTGCCCTTACTGAGCTGACCGTACGCGGC +
Preference number: 6 (lower is better)
Translates to: LTDFFWGVHSAL*RLALTELTVRG
Trigger: GCCGCGTACGGTCAGCTCAGTAAGGGCAAGCCTGCAGAGTGCCGAATGGACTCCCCAAAAGAAATCAGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CCA 72 bp TTTCTTCTCTGGGCTTGGTGGGAGCTCCTTGTTCGGTaGGGTGGTGATGTCATTTCCTGTCCCACTCACCAC +
Preference number: 6 (lower is better)
Translates to: FLLWAWWELLVR*GGDVISCPTHH
Trigger: GTGGTGAGTGGGACAGGAAATGACATCACCACCCCACCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
ENST00000462206.1
ENST00000482752.1
ENST00000497735.1
ENST00000683076.1
CDS CAA 72 bp GAGAGTGGTGGAACATCTTTGGCTGGAGTCACATTGTaGGCCAGGGTCAGAACCCCATCCTTAGCCAGGGGT +
Preference number: 6 (lower is better)
Translates to: ESGGTSLAGVTL*ARVRTPSLARG
Trigger: ACCCCTGGCTAAGGATGGGGTTCTGACCCTGGCCAACAATGTGACTCCAGCCAAAGATGTTCCACCACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp CGGGTTGACCTGCGGTCACTGGGTCTGCAAACTTGTTaGGCTTGTGTGGGAGGGGTACCGCAATACATGAAG +
Preference number: 6 (lower is better)
Translates to: RVDLRSLGLQTC*ACVGGVPQYMK
Trigger: CTTCATGTATTGCGGTACCCCTCCCACACAAGCCAAACAAGTTTGCAGACCCAGTGACCGCAGGTCAACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp GCCTCTGTTTCTGAGAGTGGTGGAACATCTTTGGCTGGAGTCACATaGTTGGCCAGGGTCAGAACCCCATCCTTAGCCAGGGGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: ASVSESGGTSLAGVT*LARVRTPSLARGAS
Trigger: AGAAGCACCCCTGGCTAAGGATGGGGTTCTGACCCTGGCCAACAATGTGACTCCAGCCAAAGATGTTCCACCACTCTCAGAAACAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp TGCCCTCTGTCCTCTGCCATTCGAATCCGGCTTGACTaGTTTCTTTTGGGGAGTCCATTCGGCACTCTGCAG +
Preference number: 6 (lower is better)
Translates to: CPLSSAIRIRLD*FLLGSPFGTLQ
Trigger: CTGCAGAGTGCCGAATGGACTCCCCAAAAGAAATCAGTCAAGCCGGATTCGAATGGCAGAGGACAGAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 72 bp GATGCTATTCTCCATCTCTCCCGGAGTTGCTTCCCTTaGGCCCAGAGAGCCTTGAGCCACTGGATGAAAGCT +
Preference number: 6 (lower is better)
Translates to: DAILHLSRSCFP*AQRALSHWMKA
Trigger: AGCTTTCATCCAGTGGCTCAAGGCTCTCTGGGCTCAAGGGAAGCAACTCCGGGAGAGATGGAGAATAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 72 bp TATCATTTACCACCCCAATCACTGGGCAGCCAGGGGTaGTGCTATTCTCCATCTCTCCCGGAGTTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: YHLPPQSLGSQG*CYSPSLPELLP
Trigger: GGGAAGCAACTCCGGGAGAGATGGAGAATAGCATCACCCCTGGCTGCCCAGTGATTGGGGTGGTAAATGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 72 bp TTATCTGCAAGGTTGACAGCTGGGGGAACTGAGAGGTaGGAACATTCAGACAGGGCCCTGCGCACTGCCTTT +
Preference number: 6 (lower is better)
Translates to: LSARLTAGGTER*EHSDRALRTAF
Trigger: AAAGGCAGTGCGCAGGGCCCTGTCTGAATGTTCTCACCTCTCAGTTCCCCCAGCTGTCAACCTTGCAGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS GCA 72 bp AACACCATAGTGATTGGCGGAATGGTGGTGGGTGAATaGTCAATAATGGGGGCTGGGTGGGCTAGAGACACC +
Preference number: 6 (lower is better)
Translates to: NTIVIGGMVVGE*SIMGAGWARDT
Trigger: GGTGTCTCTAGCCCACCCAGCCCCCATTATTGAGCATTCACCCACCACCATTCCGCCAATCACTATGGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CCA 72 bp CTAAAGGTAGTGCTTTATCCTTGGTCAAGATCACGTTaGTTTCCGGGGGCAGTGTCATGTCCCTGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: LKVVLYPWSRSR*FPGAVSCPWPG
Trigger: CCCTGGCCAGGGACATGACACTGCCCCCGGAAACCAACGTGATCTTGACCAAGGATAAAGCACTACCTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp CATTCTGGCACCTACCTTTGTTTTCTTCTCTGGGCTTaGTGGGAGCTCCTTGTTCGGTGGGGTGGTGATGTC +
Preference number: 6 (lower is better)
Translates to: HSGTYLCFLLWA*WELLVRWGGDV
Trigger: GACATCACCACCCCACCGAACAAGGAGCTCCCACCAAGCCCAGAGAAGAAAACAAAGGTAGGTGCCAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482752.1
ENST00000497735.1
CDS CAA 72 bp GGGGCCACCTCTGCTTCTAAAGGTAGTGCTTTATCCTaGGTCAAGATCACGTTGGTTTCCGGGGGCAGTGTC +
Preference number: 6 (lower is better)
Translates to: GATSASKGSALS*VKITLVSGGSV
Trigger: GACACTGCCCCCGGAAACCAACGTGATCTTGACCAAGGATAAAGCACTACCTTTAGAAGCAGAGGTGGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp TGGTGGTTTTCTTCATGGAACTGGTGGAGGTGCTCTTaGGGCGACTCAAGTCAGCAGTGGGCTTCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: WWFSSWNWWRCS*GDSSQQWASWA
Trigger: TGCCCAAGAAGCCCACTGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCATGAAGAAAACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS CAA 72 bp AAAGATCACTGGTCTGGTGTTGCAGCAGCCCCAGTGTaGAGAGACACGCTAGGCTTCTGTAGTATCGCTCCC +
Preference number: 6 (lower is better)
Translates to: KDHWSGVAAAPV*RDTLGFCSIAP
Trigger: GGGAGCGATACTACAGAAGCCTAGCGTGTCTCTCAACACTGGGGCTGCTGCAACACCAGACCAGTGATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000439356.2
CDS CAA 90 bp ACCTCTGCTTCTAAAGGTAGTGCTTTATCCTTGGTCAAGATCACGTaGGTTTCCGGGGGCAGTGTCATGTCCCTGGCCAGGGCTACCTCT +
Preference number: 6 (lower is better)
Translates to: TSASKGSALSLVKIT*VSGGSVMSLARATS
Trigger: AGAGGTAGCCCTGGCCAGGGACATGACACTGCCCCCGGAAACCAACGTGATCTTGACCAAGGATAAAGCACTACCTTTAGAAGCAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp TCCTTGACTGGGGCCACCTCTGCTTCTAAAGGTAGTGCTTTATCCTaGGTCAAGATCACGTTGGTTTCCGGGGGCAGTGTCATGTCCCTG +
Preference number: 6 (lower is better)
Translates to: SLTGATSASKGSALS*VKITLVSGGSVMSL
Trigger: CAGGGACATGACACTGCCCCCGGAAACCAACGTGATCTTGACCAAGGATAAAGCACTACCTTTAGAAGCAGAGGTGGCCCCAGTCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp TGTCTGGAGATGGTTCTGTTAATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACCACTGCAACTGCCCGC +
Preference number: 6 (lower is better)
Translates to: CLEMVLLMHLQD*GQPFCTTATAR
Trigger: GCGGGCAGTTGCAGTGGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCATTAACAGAACCATCTCCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000439356.2
CDS TCA 72 bp TGCCTCCGTGAGATCAGCCTTAGTGCCTGGTTGCTTTaGAGAATTCAGCCCCAGCTCCTCACTCTTATCCTG +
Preference number: 6 (lower is better)
Translates to: CLREISLSAWLL*RIQPQLLTLIL
Trigger: CAGGATAAGAGTGAGGAGCTGGGGCTGAATTCTTCAAAGCAACCAGGCACTAAGGCTGATCTCACGGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp TGTCTGGAGATGGTTCTGTTAATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACCACTGCAACTGCCCGG +
Preference number: 6 (lower is better)
Translates to: CLEMVLLMHLQD*GQPFCTTATAR
Trigger: CCGGGCAGTTGCAGTGGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCATTAACAGAACCATCTCCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468075.2
CDS GCA 72 bp GCTAGAGACACCAGGAGTGGGGACTCACACTTCAGCTaGTCAGAGTTATCATTTACCACCCCAATCACTGGG +
Preference number: 6 (lower is better)
Translates to: ARDTRSGDSHFS*SELSFTTPITG
Trigger: CCCAGTGATTGGGGTGGTAAATGATAACTCTGAGCAGCTGAAGTGTGAGTCCCCACTCCTGGTGTCTCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS GCA 72 bp ACCCCAGGGACCTGTACCAACACTTGGCCCTGCAGCTaGTCAGAAGTAAAGATGCTGATCTCTTGTCTTTCG +
Preference number: 6 (lower is better)
Translates to: TPGTCTNTWPCS*SEVKMLISCLS
Trigger: CGAAAGACAAGAGATCAGCATCTTTACTTCTGAGCAGCTGCAGGGCCAAGTGTTGGTACAGGTCCCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS GCA 72 bp TCCACTTTCCAAAGGAATCAATGCCTGCATGGTGCCTaGCACCTTAGGCTGAGTCATCTCTTTAGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: STFQRNQCLHGA*HLRLSHLFRLP
Trigger: GGGGAGCCTAAAGAGATGACTCAGCCTAAGGTGGCAGGCACCATGCAGGCATTGATTCCTTTGGAAAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp GCCAGAGCCGTCTGTCCTGGCTGTTTCTCTCCTCGCTaGCAAACCTGCGAGCATGAATCAATTCTAGTTTCA +
Preference number: 6 (lower is better)
Translates to: ARAVCPGCFSPR*QTCEHESILVS
Trigger: TGAAACTAGAATTGATTCATGCTCGCAGGTTTGCCAGCGAGGAGAGAAACAGCCAGGACAGACGGCTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335271.9
ENST00000420772.6
ENST00000497735.1
CDS CCA 72 bp CGTGGGGGCTTTTCAAACAGGAACGATGGAGTGCTCTaGGTTGCAGTGACCTCAATTTCTTTCTTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: RGGFSNRNDGVL*VAVTSISFFPA
Trigger: GGCAGGGAAGAAAGAAATTGAGGTCACTGCAACCCAGAGCACTCCATCGTTCCTGTTTGAAAAGCCCCCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335271.9
ENST00000420772.6
ENST00000497735.1
CDS CCA 72 bp GAGACATGTCCTTCAACAAGCCCACTTCTTTTACTGTaGACGGAGCCACATCCTTGGCCGGGGCTATTTCTG +
Preference number: 6 (lower is better)
Translates to: ETCPSTSPLLLL*TEPHPWPGLFL
Trigger: CAGAAATAGCCCCGGCCAAGGATGTGGCTCCGTCCACAGTAAAAGAAGTGGGCTTGTTGAAGGACATGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp CAGCTGCTCAGAGTTATCATTTACCACCCCAATCACTaGGCAGCCAGGGGTGATGCTATTCTCCATCTCTCC +
Preference number: 6 (lower is better)
Translates to: QLLRVIIYHPNH*AARGDAILHLS
Trigger: GGAGAGATGGAGAATAGCATCACCCCTGGCTGCCCAGTGATTGGGGTGGTAAATGATAACTCTGAGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CCA 72 bp GGTTCATTCTCTACCCCAGGGACCTGTACCAACACTTaGCCCTGCAGCTGCTCAGAAGTAAAGATGCTGATC +
Preference number: 6 (lower is better)
Translates to: GSFSTPGTCTNT*PCSCSEVKMLI
Trigger: GATCAGCATCTTTACTTCTGAGCAGCTGCAGGGCCAAGTGTTGGTACAGGTCCCTGGGGTAGAGAATGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp TCTAAAGGTAGTGCTTTATCCTTGGTCAAGATCACGTaGGTTTCCGGGGGCAGTGTCATGTCCCTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SKGSALSLVKIT*VSGGSVMSLAR
Trigger: CCTGGCCAGGGACATGACACTGCCCCCGGAAACCAACGTGATCTTGACCAAGGATAAAGCACTACCTTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp CAGTTTGCCCTCTGTCCTCTGCCATTCGAATCCGGCTaGACTGATTTCTTTTGGGGAGTCCATTCGGCACTC +
Preference number: 6 (lower is better)
Translates to: QFALCPLPFESG*TDFFWGVHSAL
Trigger: GAGTGCCGAATGGACTCCCCAAAAGAAATCAGTCAAGCCGGATTCGAATGGCAGAGGACAGAGGGCAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CAA 90 bp TCTGTTTCTGAGAGTGGTGGAACATCTTTGGCTGGAGTCACATTGTaGGCCAGGGTCAGAACCCCATCCTTAGCCAGGGGTGCTTCTGTT +
Preference number: 6 (lower is better)
Translates to: SVSESGGTSLAGVTL*ARVRTPSLARGASV
Trigger: AACAGAAGCACCCCTGGCTAAGGATGGGGTTCTGACCCTGGCCAACAATGTGACTCCAGCCAAAGATGTTCCACCACTCTCAGAAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp AATCCTGCCCCCTGGATTTGCTCTTGGCAGCTCACATCTGTCACCTaGGCAGGTGGTTCAGTAACAGTAGAAGCCTTGACTGTGCTTATC +
Preference number: 6 (lower is better)
Translates to: NPAPWICSWQLTSVT*AGGSVTVEALTVLI
Trigger: GATAAGCACAGTCAAGGCTTCTACTGTTACTGAACCACCTGCCAAGGTGACAGATGTGAGCTGCCAAGAGCAAATCCAGGGGGCAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp AGTTTGCCCTCTGTCCTCTGCCATTCGAATCCGGCTTaGCTGATTTCTTTTGGGGAGTCCATTCGGCACTCT +
Preference number: 6 (lower is better)
Translates to: SLPSVLCHSNPA*LISFGESIRHS
Trigger: AGAGTGCCGAATGGACTCCCCAAAAGAAATCAGTCAAGCCGGATTCGAATGGCAGAGGACAGAGGGCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS GCA 72 bp CTGTGCACTTGCAATTGGGCCGGCTGTTTTAGTGACTaGATTAGATTCAGGCTTTCGGGTTGTAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LCTCNWAGCFSD*IRFRLSGCSSC
Trigger: GCAGCTGCTACAACCCGAAAGCCTGAATCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp GGTGGTTTTCTTCATGGAACTGGTGGAGGTGCTCTTTaGGCGACTCAAGTCAGCTGGTACAGACTTTGCAGT +
Preference number: 6 (lower is better)
Translates to: GGFLHGTGGGAL*ATQVSWYRLCS
Trigger: ACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCATGAAGAAAACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS CCA 72 bp GGAAATTACCTCTATCTGCATATCCTTCTAGGGCTCTaGCCTCTCCTGGTAGGCTCTGGTCTTCTACTGGCA +
Preference number: 6 (lower is better)
Translates to: GNYLYLHILLGL*PLLVGSGLLLA
Trigger: TGCCAGTAGAAGACCAGAGCCTACCAGGAGAGGCCAGAGCCCTAGAAGGATATGCAGATAGAGGTAATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp CTCCAGGAAGCTGGCATTCTTCACAAGCCCATCTTTTaGTTGCCCGTCCATGCTGACATTCAGCCCAATTTC +
Preference number: 6 (lower is better)
Translates to: LQEAGILHKPIF*LPVHADIQPNF
Trigger: GAAATTGGGCTGAATGTCAGCATGGACGGGCAACCAAAAGATGGGCTTGTGAAGAATGCCAGCTTCCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CAA 72 bp TGGTGGTTTTCTTCATGGAACTGGTGGAGGTGCTCTTaGGGCGACTCAAGTCAGCTGGTACAGACTTTGCAG +
Preference number: 6 (lower is better)
Translates to: WWFSSWNWWRCS*GDSSQLVQTLQ
Trigger: CTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAAGAGCACCTCCACCAGTTCCATGAAGAAAACCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS CAA 72 bp CCCTGGATTTGCTCTTGGCAGCTCACATCTGTCACCTaGGCAGGTGGTTCAGTAACAGTAGAAGCCTTGACT +
Preference number: 6 (lower is better)
Translates to: PWICSWQLTSVT*AGGSVTVEALT
Trigger: AGTCAAGGCTTCTACTGTTACTGAACCACCTGCCAAGGTGACAGATGTGAGCTGCCAAGAGCAAATCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp TCCTCAGTCAGGGCCACCTCCATTTCTGGAGGCAGACATACGTTCTaGATGAGAACTACTTCTGTTTCTGGAGGTGGAGTCACATCCTTG +
Preference number: 6 (lower is better)
Translates to: SSVRATSISGGRHTF*MRTTSVSGGGVTSL
Trigger: CAAGGATGTGACTCCACCTCCAGAAACAGAAGTAGTTCTCATCAAGAACGTATGTCTGCCTCCAGAAATGGAGGTGGCCCTGACTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp ATTGGAACTGGTGTTGCCTCTGTTTCTGAGAGTGGTGGAACATCTTaGGCTGGAGTCACATTGTTGGCCAGGGTCAGAACCCCATCCTTA +
Preference number: 6 (lower is better)
Translates to: IGTGVASVSESGGTS*AGVTLLARVRTPSL
Trigger: TAAGGATGGGGTTCTGACCCTGGCCAACAATGTGACTCCAGCCAAAGATGTTCCACCACTCTCAGAAACAGAGGCAACACCAGTTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp GTTCTGCTCCAGGAAGCTGGCATTCTTCACAAGCCCATCTTTTGGTaGCCCGTCCATGCTGACATTCAGCCCAATTTCATTCAGTTTGCC +
Preference number: 6 (lower is better)
Translates to: VLLQEAGILHKPIFW*PVHADIQPNFIQFA
Trigger: GGCAAACTGAATGAAATTGGGCTGAATGTCAGCATGGACGGGCAACCAAAAGATGGGCTTGTGAAGAATGCCAGCTTCCTGGAGCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 72 bp CAACATCATCAAAGGCCTCTGCCTCTAGTGTGGCAATaGAGTCCCGCTTTATCTCTCCCTCAATGTCTGGAG +
Preference number: 6 (lower is better)
Translates to: QHHQRPLPLVWQ*SPALSLPQCLE
Trigger: CTCCAGACATTGAGGGAGAGATAAAGCGGGACTTCATTGCCACACTAGAGGCAGAGGCCTTTGATGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000434267.5
ENST00000439356.2
ENST00000468075.2
ENST00000633710.1
ENST00000683076.1
CDS TCA 72 bp TGTCTGGAGATGGTTCTGTTAATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACCACTGCAACTGCAGGA +
Preference number: 6 (lower is better)
Translates to: CLEMVLLMHLQD*GQPFCTTATAG
Trigger: TCCTGCAGTTGCAGTGGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCATTAACAGAACCATCTCCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434267.5
ENST00000683076.1
CDS TCA 72 bp TGTCTGGAGATGGTTCTGTTAATGCATCTGCAAGACTaGGGTCAGCCATTCTGCACCACTGCAACTGCTGTG +
Preference number: 6 (lower is better)
Translates to: CLEMVLLMHLQD*GQPFCTTATAV
Trigger: CACAGCAGTTGCAGTGGTGCAGAATGGCTGACCTCAGTCTTGCAGATGCATTAACAGAACCATCTCCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633710.1
CDS CCA 72 bp GGGCCATATCTGATTCCATGGATGGCTGCATGTCCTTaGCCAGTGTCACATCTAATTTGGTGGGTGATTCCA +
Preference number: 6 (lower is better)
Translates to: GPYLIPWMAACP*PVSHLIWWVIP
Trigger: TGGAATCACCCACCAAATTAGATGTGACACTGGCCAAGGACATGCAGCCATCCATGGAATCAGATATGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp AGGGCCACTTCTTTTTCTGTGGGTAGTTCCATGTCCTaGACTAGGGCCATATCTGATTCCATGGATGGCTGC +
Preference number: 6 (lower is better)
Translates to: RATSFSVGSSMS*TRAISDSMDGC
Trigger: GCAGCCATCCATGGAATCAGATATGGCCCTAGTCAAGGACATGGAACTACCCACAGAAAAAGAAGTGGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp TTTGGGCGACTCAAGTCAGCTGGTACAGACTTTGCAGTCATCTTCTaGACTTCTGCAGGTTTTCCCTCAGTCTTAATGGCAGTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: FGRLKSAGTDFAVIF*TSAGFPSVLMAVGF
Trigger: GAAGCCCACTGCCATTAAGACTGAGGGAAAACCTGCAGAAGTCAAGAAGATGACTGCAAAGTCTGTACCAGCTGACTTGAGTCGCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS CAA 90 bp TCTTTAGCCAATGCCACCTCGGTTTTTGTAGCTAGTGCCATGTCCTaGGCGAGGGCCATCTCTGTTTCTTTAGATGGTGCCATGTCAGTA +
Preference number: 6 (lower is better)
Translates to: SLANATSVFVASAMS*ARAISVSLDGAMSV
Trigger: TACTGACATGGCACCATCTAAAGAAACAGAGATGGCCCTCGCCAAGGACATGGCACTAGCTACAAAAACCGAGGTGGCATTGGCTAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp TCCTTAACCAGGGCCACTTCTTTTTCTGTGGGTAGTTCCATGTCCTaGACTAGGGCCATATCTGATTCCATGGATGGCTGCATGTCCTTG +
Preference number: 6 (lower is better)
Translates to: SLTRATSFSVGSSMS*TRAISDSMDGCMSL
Trigger: CAAGGACATGCAGCCATCCATGGAATCAGATATGGCCCTAGTCAAGGACATGGAACTACCCACAGAAAAAGAAGTGGCCCTGGTTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp AATTTCATTCAGTTTGCCCTCTGTCCTCTGCCATTCGAATCCGGCTaGACTGATTTCTTTTGGGGAGTCCATTCGGCACTCTGCAGGCTT +
Preference number: 6 (lower is better)
Translates to: NFIQFALCPLPFESG*TDFFWGVHSALCRL
Trigger: AAGCCTGCAGAGTGCCGAATGGACTCCCCAAAAGAAATCAGTCAAGCCGGATTCGAATGGCAGAGGACAGAGGGCAAACTGAATGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 72 bp GTTGGAGACCCTGTAGTATCGCTCCCTTCTACTCCATaGCCACCATTGGCTAGGAGTGTTGGTTTAGAAGAT +
Preference number: 6 (lower is better)
Translates to: VGDPVVSLPSTP*PPLARSVGLED
Trigger: ATCTTCTAAACCAACACTCCTAGCCAATGGTGGTCATGGAGTAGAAGGGAGCGATACTACAGGGTCTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000633710.1
ENST00000683076.1
CDS TCA 72 bp TCTTCACAAGCCCATCTTTTGGTTGCCCGTCCATGCTaGCATTCAGCCCAATTTCATTCAGTTTGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: SSQAHLLVARPC*HSAQFHSVCPL
Trigger: CAGAGGGCAAACTGAATGAAATTGGGCTGAATGTCAGCATGGACGGGCAACCAAAAGATGGGCTTGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 72 bp TGTACCCATAGTGGTAGGCTGGCTGGGGAGAACACCTaGTTTTTGTGTGTCAGCTGCAAATGGATGACCTTT +
Preference number: 6 (lower is better)
Translates to: CTHSGRLAGENT*FLCVSCKWMTF
Trigger: AAAGGTCATCCATTTGCAGCTGACACACAAAAATCAGGTGTTCTCCCCAGCCAGCCTACCACTATGGGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS GCA 72 bp TCCTTGACTAGGGCCATATCTGATTCCATGGATGGCTaGATGTCCTTGGCCAGTGTCACATCTAATTTGGTG +
Preference number: 6 (lower is better)
Translates to: SLTRAISDSMDG*MSLASVTSNLV
Trigger: CACCAAATTAGATGTGACACTGGCCAAGGACATGCAGCCATCCATGGAATCAGATATGGCCCTAGTCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS GCA 72 bp TATCTGGACTTTCCCCGCAGGTTGTTTCTGTGCACTTaGAATTGGGCCGGCTGTTTTAGTGACTGCATTAGA +
Preference number: 6 (lower is better)
Translates to: YLDFPRRLFLCT*NWAGCFSDCIR
Trigger: TCTAATGCAGTCACTAAAACAGCCGGCCCAATTGCAAGTGCACAGAAACAACCTGCGGGGAAAGTCCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS GCA 72 bp AGGAAGCTGGCATTCTTCACAAGCCCATCTTTTGGTTaGCCGTCCATGCTGACATTCAGCCCAATTTCATTC +
Preference number: 6 (lower is better)
Translates to: RKLAFFTSPSFG*PSMLTFSPISF
Trigger: GAATGAAATTGGGCTGAATGTCAGCATGGACGGGCAACCAAAAGATGGGCTTGTGAAGAATGCCAGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS GCA 72 bp TCATTATTGGTGTGCTTTCTATATCCCAGGCCTCCCTaGCAAGATCCCTCTGGGGTTCAAGTGAGTCAACAT +
Preference number: 6 (lower is better)
Translates to: SLLVCFLYPRPP*QDPSGVQVSQH
Trigger: ATGTTGACTCACTTGAACCCCAGAGGGATCTTGGCAGGGAGGCCTGGGATATAGAAAGCACACCAATAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp GGATCAGTCTGGATAGGATCGACCACTTGCTCAGGTTaGAAACAAAAGTTGGTATCTTCTGGCCAGTTCTGG +
Preference number: 6 (lower is better)
Translates to: GSVWIGSTTCSG*KQKLVSSGQFW
Trigger: CCAGAACTGGCCAGAAGATACCAACTTTTGTTTCCAACCTGAGCAAGTGGTCGATCCTATCCAGACTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000482752.1
ENST00000683076.1
CDS CCA 72 bp CCTACTGACTGGCTTTTATCTACAGGAGTCTTCAGGTaGGGTGCAGGCTGTGGTTTGTATTCATGTTGCTTC +
Preference number: 6 (lower is better)
Translates to: PTDWLLSTGVFR*GAGCGLYSCCF
Trigger: GAAGCAACATGAATACAAACCACAGCCTGCACCCCACCTGAAGACTCCTGTAGATAAAAGCCAGTCAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp TTGCTCTTGGCAGCTCACATCTGTCACCTTGGCAGGTaGTTCAGTAACAGTAGAAGCCTTGACTGTGCTTAT +
Preference number: 6 (lower is better)
Translates to: LLLAAHICHLGR*FSNSRSLDCAY
Trigger: ATAAGCACAGTCAAGGCTTCTACTGTTACTGAACCACCTGCCAAGGTGACAGATGTGAGCTGCCAAGAGCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp CCAGGCTTGTGCTTGATGTTAGCCTTAGACCCACACTaGGAGGAGACCTTAGAGATGTCCACTTTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: PGLCLMLALDPH*EETLEMSTFLF
Trigger: GAACAAGAAAGTGGACATCTCTAAGGTCTCCTCCAAGTGTGGGTCTAAGGCTAACATCAAGCACAAGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335271.9
ENST00000360240.10
ENST00000395734.7
ENST00000420772.6
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS CAA 72 bp CAGGAAGCTGGCATTCTTCACAAGCCCATCTTTTGGTaGCCCGTCCATGCTGACATTCAGCCCAATTTCATT +
Preference number: 6 (lower is better)
Translates to: QEAGILHKPIFW*PVHADIQPNFI
Trigger: AATGAAATTGGGCTGAATGTCAGCATGGACGGGCAACCAAAAGATGGGCTTGTGAAGAATGCCAGCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS CAA 90 bp TTCTGGCCTGGCTATTCCAGCGGACTTCAGTTGCTTATGTCTCTCTaGTTCCTGGATTGTAGACTTTGGCAAAAGTGGAGTAAGTCCTCG +
Preference number: 6 (lower is better)
Translates to: FWPGYSSGLQLLMSL*FLDCRLWQKWSKSS
Trigger: CGAGGACTTACTCCACTTTTGCCAAAGTCTACAATCCAGGAACAAGAGAGACATAAGCAACTGAAGTCCGCTGGAATAGCCAGGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000429422.5
CDS CAA 90 bp TCTCTTAAATGGTTCATTCTCTACCCCAGGGACCTGTACCAACACTaGGCCCTGCAGCTGCTCAGAAGTAAAGATGCTGATCTCTTGTCT +
Preference number: 6 (lower is better)
Translates to: SLKWFILYPRDLYQH*ALQLLRSKDADLLS
Trigger: AGACAAGAGATCAGCATCTTTACTTCTGAGCAGCTGCAGGGCCAAGTGTTGGTACAGGTCCCTGGGGTAGAGAATGAACCATTTAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp CTCACATCTGTCACCTTGGCAGGTGGTTCAGTAACAGTAGAAGCCTaGACTGTGCTTATCTTGTTTTCCCCAAGAGTCCCAAGCTCAACA +
Preference number: 6 (lower is better)
Translates to: LTSVTLAGGSVTVEA*TVLILFSPRVPSST
Trigger: TGTTGAGCTTGGGACTCTTGGGGAAAACAAGATAAGCACAGTCAAGGCTTCTACTGTTACTGAACCACCTGCCAAGGTGACAGATGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp GATTCCATGGATGGCTGCATGTCCTTGGCCAGTGTCACATCTAATTaGGTGGGTGATTCCATATCTTTAGCCAATGCCACCTCGGTTTTT +
Preference number: 6 (lower is better)
Translates to: DSMDGCMSLASVTSN*VGDSISLANATSVF
Trigger: AAAAACCGAGGTGGCATTGGCTAAAGATATGGAATCACCCACCAAATTAGATGTGACACTGGCCAAGGACATGCAGCCATCCATGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp GGTGTCTCCAAAATCTTATCTTTGGGTTCTGGGAGTCGAACACCCTaGGAAGCAGTCATTATTACTAACGTATCCGCCACCTCTGAAGGA +
Preference number: 6 (lower is better)
Translates to: GVSKILSLGSGSRTP*EAVIITNVSATSEG
Trigger: TCCTTCAGAGGTGGCGGATACGTTAGTAATAATGACTGCTTCCAAGGGTGTTCGACTCCCAGAACCCAAAGATAAGATTTTGGAGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp TGTATGCAGAAACTTCTGCTAGGGGTCCTTTCAGATTaGGAGGGCCTACTGACTGGCTTTTATCTACAGGAG +
Preference number: 6 (lower is better)
Translates to: CMQKLLLGVLSD*EGLLTGFYLQE
Trigger: CTCCTGTAGATAAAAGCCAGTCAGTAGGCCCTCTCAATCTGAAAGGACCCCTAGCAGAAGTTTCTGCATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS GCA 72 bp AGTATCAGCTGTCGCACTGGAGGGAAAGACCAAATCTaGCAGGTCATCATCATGGTACATCTTAAAGGGATC +
Preference number: 6 (lower is better)
Translates to: SISCRTGGKDQI*QVIIMVHLKGI
Trigger: GATCCCTTTAAGATGTACCATGATGATGACCTGGCAGATTTGGTCTTTCCCTCCAGTGCGACAGCTGATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000482752.1
ENST00000683076.1
CDS GCA 72 bp GTCCTTGGCGAGGGCCATCTCTGTTTCTTTAGATGGTaGCATGTCAGTAGTCTTCAGTCCCATCATTATTTC +
Preference number: 6 (lower is better)
Translates to: VLGEGHLCFFRW*HVSSLQSHHYF
Trigger: GAAATAATGATGGGACTGAAGACTACTGACATGGCACCATCTAAAGAAACAGAGATGGCCCTCGCCAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS GCA 72 bp GCACCACTGTGCACTGACTCAGATTCTCCTATCACATaGCCTTCATCGATCCCTGCTTCATTTTTCATGGAA +
Preference number: 6 (lower is better)
Translates to: APLCTDSDSPIT*PSSIPASFFME
Trigger: TTCCATGAAAAATGAAGCAGGGATCGATGAAGGGCATGTGATAGGAGAATCTGAGTCAGTGCACAGTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS GCA 72 bp ACGTATCCGCCACCTCTGAAGGAGGAGCTTCGACTTTaGTATGTAAGAAATCTGACTGGATTTCTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: TYPPPLKEELRL*YVRNLTGFLVL
Trigger: CAACACCAGAAATCCAGTCAGATTTCTTACATAGCAAAGTCGAAGCTCCTCCTTCAGAGGTGGCGGATACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp CACTTGCTCAGGTTGGAAACAAAAGTTGGTATCTTCTaGCCAGTTCTGGCTATTTGGGTATTCCTGGTAGGC +
Preference number: 6 (lower is better)
Translates to: HLLRLETKVGIF*PVLAIWVFLVG
Trigger: GCCTACCAGGAATACCCAAATAGCCAGAACTGGCCAGAAGATACCAACTTTTGTTTCCAACCTGAGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp CTGGAGGGAAAGACCAAATCTGCCAGGTCATCATCATaGTACATCTTAAAGGGATCAGTCTGGATAGGATCG +
Preference number: 6 (lower is better)
Translates to: LEGKTKSARSSS*YILKGSVWIGS
Trigger: CGATCCTATCCAGACTGATCCCTTTAAGATGTACCATGATGATGACCTGGCAGATTTGGTCTTTCCCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000482752.1
ENST00000683076.1
CDS CCA 72 bp CAGACATACGTTCTTGATGAGAACTACTTCTGTTTCTaGAGGTGGAGTCACATCCTTGCCCAGAGCCATTTC +
Preference number: 6 (lower is better)
Translates to: QTYVLDENYFCF*RWSHILAQSHF
Trigger: GAAATGGCTCTGGGCAAGGATGTGACTCCACCTCCAGAAACAGAAGTAGTTCTCATCAAGAACGTATGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp TCTCTCTTGTTCCTGGATTGTAGACTTTGGCAAAAGTaGAGTAAGTCCTCGGGACTTGGTGGGTCTCATGTA +
Preference number: 6 (lower is better)
Translates to: SLLFLDCRLWQK*SKSSGLGGSHV
Trigger: TACATGAGACCCACCAAGTCCCGAGGACTTACTCCACTTTTGCCAAAGTCTACAATCCAGGAACAAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS CCA 72 bp GATACAAGTCCATATTCTGTACCCATAGTGGTAGGCTaGCTGGGGAGAACACCTGATTTTTGTGTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: DTSPYSVPIVVG*LGRTPDFCVSA
Trigger: AGCTGACACACAAAAATCAGGTGTTCTCCCCAGCCAGCCTACCACTATGGGTACAGAATATGGACTTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp CTTATCCTGAGTAGTCATTCCTTCAGTTTTAGAGACTaGCTCACTCGGTATGAGAACAGCCCTTCCGTCCTT +
Preference number: 6 (lower is better)
Translates to: LILSSHSFSFRD*LTRYENSPSVL
Trigger: AAGGACGGAAGGGCTGTTCTCATACCGAGTGAGCCAGTCTCTAAAACTGAAGGAATGACTACTCAGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp ATACCAGTCTGGATAGGATCGACCACTTGCTCAGGTTaGAAACAAAAGTTGGTATCTTCTGGCCAGTTCTGG +
Preference number: 6 (lower is better)
Translates to: IPVWIGSTTCSG*KQKLVSSGQFW
Trigger: CCAGAACTGGCCAGAAGATACCAACTTTTGTTTCCAACCTGAGCAAGTGGTCGATCCTATCCAGACTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423088.5
CDS CAA 72 bp TCCTTCTTCTGGCCTGGCTATTCCAGCGGACTTCAGTaGCTTATGTCTCTCTTGTTCCTGGATTGTAGACTT +
Preference number: 6 (lower is better)
Translates to: SFFWPGYSSGLQ*LMSLLFLDCRL
Trigger: AAGTCTACAATCCAGGAACAAGAGAGACATAAGCAACTGAAGTCCGCTGGAATAGCCAGGCCAGAAGAAGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000429422.5
CDS CAA 72 bp TCTACAGGAGTCTTCAGGTGGGGTGCAGGCTGTGGTTaGTATTCATGTTGCTTCAGCAATTTCTTGTCTTGG +
Preference number: 6 (lower is better)
Translates to: STGVFRWGAGCG*YSCCFSNFLSW
Trigger: CCAAGACAAGAAATTGCTGAAGCAACATGAATACAAACCACAGCCTGCACCCCACCTGAAGACTCCTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp CCAGGCAGCTTGTGTTCAGTCCTGACTAAATGCATTTaGGATCAGGCACCTGCCTTCAACATTTCTGTCCAA +
Preference number: 6 (lower is better)
Translates to: PGSLCSVLTKCI*DQAPAFNISVQ
Trigger: TTGGACAGAAATGTTGAAGGCAGGTGCCTGATCCAAAATGCATTTAGTCAGGACTGAACACAAGCTGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000633710.1
ENST00000683076.1
CDS CAA 90 bp TCCTTGACTAGGGCCATATCTGATTCCATGGATGGCTGCATGTCCTaGGCCAGTGTCACATCTAATTTGGTGGGTGATTCCATATCTTTA +
Preference number: 6 (lower is better)
Translates to: SLTRAISDSMDGCMS*ASVTSNLVGDSISL
Trigger: TAAAGATATGGAATCACCCACCAAATTAGATGTGACACTGGCCAAGGACATGCAGCCATCCATGGAATCAGATATGGCCCTAGTCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp GTTTCTACATTGTATGCAGAAACTTCTGCTAGGGGTCCTTTCAGATaGAGAGGGCCTACTGACTGGCTTTTATCTACAGGAGTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: VSTLYAETSARGPFR*RGPTDWLLSTGVFR
Trigger: CCTGAAGACTCCTGTAGATAAAAGCCAGTCAGTAGGCCCTCTCAATCTGAAAGGACCCCTAGCAGAAGTTTCTGCATACAATGTAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp GGAGAGCAACCCTCTTTAAGTCTGATATCCAAAGGGGTTTCTACATaGTATGCAGAAACTTCTGCTAGGGGTCCTTTCAGATTGAGAGGG +
Preference number: 6 (lower is better)
Translates to: GEQPSLSLISKGVST*YAETSARGPFRLRG
Trigger: CCCTCTCAATCTGAAAGGACCCCTAGCAGAAGTTTCTGCATACAATGTAGAAACCCCTTTGGATATCAGACTTAAAGAGGGTTGCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp TGTGTTTTGGCTTTCGATGTTGAAGTCTTTGCAGGTTaGGTGGTGGCCAAAGGCTTTGTTTTCTTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: CVLAFDVEVFAG*VVAKGFVFFSG
Trigger: CCCAGAGAAGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS TCA 72 bp TGTTTCTGTGCTAACACCAGAAGTCTGAGTCATGCCTaGTCCACTTTCCAAAGGAATCAATGCCTGCATGGT +
Preference number: 6 (lower is better)
Translates to: CFCANTRSLSHA*STFQRNQCLHG
Trigger: ACCATGCAGGCATTGATTCCTTTGGAAAGTGGATCAGGCATGACTCAGACTTCTGGTGTTAGCACAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp ATTGGCTGCATCTGTCTTATTCTCCTCAGATACTACTaGAGGAACAAATCCTGCCCCCTGGATTTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: IGCICLILLRYY*RNKSCPLDLLL
Trigger: CAAGAGCAAATCCAGGGGGCAGGATTTGTTCCTTCAGTAGTATCTGAGGAGAATAAGACAGATGCAGCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp CTAATAGGAACTATCCAGGCAGCTTGTGTTCAGTCCTaGCTAAATGCATTTTGGATCAGGCACCTGCCTTCA +
Preference number: 6 (lower is better)
Translates to: LIGTIQAACVQS*LNAFWIRHLPS
Trigger: TGAAGGCAGGTGCCTGATCCAAAATGCATTTAGTCAGGACTGAACACAAGCTGCCTGGATAGTTCCTATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633710.1
CDS GCA 72 bp GTCTGTCCTGGCTGTTTCTCTCCTCGCTGGCAAACCTaGGAGCATGAATCAATTCTAGTTTCACTAAAATCT +
Preference number: 6 (lower is better)
Translates to: VCPGCFSPRWQT*EHESILVSLKS
Trigger: AGATTTTAGTGAAACTAGAATTGATTCATGCTCGCAGGTTTGCCAGCGAGGAGAGAAACAGCCAGGACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335271.9
ENST00000420772.6
ENST00000497735.1
CDS CAA 72 bp AAGTGGGCTGTGTTTTGGCTTTCGATGTTGAAGTCTTaGCAGGTTGAGTGGTGGCCAAAGGCTTTGTTTTCT +
Preference number: 6 (lower is better)
Translates to: KWAVFWLSMLKS*QVEWWPKALFS
Trigger: AGAAAACAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACACAGCCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360240.10
ENST00000383736.3
ENST00000395734.7
ENST00000426837.6
ENST00000429422.5
ENST00000683076.1
CDS CAA 72 bp TGGAAATCTGGGCTGGGGCTATCTCTTGCCCATTTTTaGCCAAGGTATCTGGAAAGGAATCACCTTCCTTTA +
Preference number: 6 (lower is better)
Translates to: WKSGLGLSLAHF*PRYLERNHLPL
Trigger: TAAAGGAAGGTGATTCCTTTCCAGATACCTTGGCAAAAAATGGGCAAGAGATAGCCCCAGCCCAGATTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp GGCTATTCCAGCGGACTTCAGTTGCTTATGTCTCTCTaGTTCCTGGATTGTAGACTTTGGCAAAAGTGGAGT +
Preference number: 6 (lower is better)
Translates to: GYSSGLQLLMSL*FLDCRLWQKWS
Trigger: ACTCCACTTTTGCCAAAGTCTACAATCCAGGAACAAGAGAGACATAAGCAACTGAAGTCCGCTGGAATAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000429422.5
CDS CAA 72 bp TTGTATGCAGAAACTTCTGCTAGGGGTCCTTTCAGATaGAGAGGGCCTACTGACTGGCTTTTATCTACAGGA +
Preference number: 6 (lower is better)
Translates to: LYAETSARGPFR*RGPTDWLLSTG
Trigger: TCCTGTAGATAAAAGCCAGTCAGTAGGCCCTCTCAATCTGAAAGGACCCCTAGCAGAAGTTTCTGCATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp GCTATTCCTGAGGTCTCTGAAGAAAGCTCAGAAGGTTaGCTGTTGCATGGTTTCCTTTCCCCTAGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: AIPEVSEESSEG*LLHGFLSPSFS
Trigger: AGAAAAACTAGGGGAAAGGAAACCATGCAACAGTCAACCTTCTGAGCTTTCTTCAGAGACCTCAGGAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360240.10
ENST00000395734.7
CDS TCA 72 bp GCTCTAATACCACCTACGATCACACAGAGCTTGCAGTaGCATCACACCAATTCCCCAGTATTCATGACAAAA +
Preference number: 6 (lower is better)
Translates to: ALIPPTITQSLQ*HHTNSPVFMTK
Trigger: TTTTGTCATGAATACTGGGGAATTGGTGTGATGTCACTGCAAGCTCTGTGTGATCGTAGGTGGTATTAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420772.6
CDS TCA 72 bp CTCAATTTCTCCAACTCCTTATCATGGTCTCTGATGTaGCAGCTTGCATTCAAATGTTCCTGGGTGAACACC +
Preference number: 6 (lower is better)
Translates to: LNFSNSLSWSLM*QLAFKCSWVNT
Trigger: GGTGTTCACCCAGGAACATTTGAATGCAAGCTGTCACATCAGAGACCATGATAAGGAGTTGGAGAAATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420772.6
ENST00000497735.1
CDS TCA 72 bp AAGTTGGCTGAGGTCTCTGAAGAAAGCTCAGAAGGTTaGCTGTTGCATGGTTTCCTTTCCCCTAGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: KLAEVSEESSEG*LLHGFLSPSFS
Trigger: AGAAAAACTAGGGGAAAGGAAACCATGCAACAGTCAACCTTCTGAGCTTTCTTCAGAGACCTCAGCCAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp TTTGAAGAATTCAGCCCCAGCTCCTCACTCTTATCCTaGGTAGTCATTCCTTCAGTTTTAGAGACTGGCTCA +
Preference number: 6 (lower is better)
Translates to: FEEFSPSSSLLS*VVIPSVLETGS
Trigger: TGAGCCAGTCTCTAAAACTGAAGGAATGACTACTCAGGATAAGAGTGAGGAGCTGGGGCTGAATTCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS GCA 72 bp CTGAGGTCTCTGAAGAAAGCTCAGAAGGTTGACTGTTaGATGGTTTCCTTTCCCCTAGTTTTTCTAACACAG +
Preference number: 6 (lower is better)
Translates to: LRSLKKAQKVDC*MVSFPLVFLTQ
Trigger: CTGTGTTAGAAAAACTAGGGGAAAGGAAACCATGCAACAGTCAACCTTCTGAGCTTTCTTCAGAGACCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS GCA 72 bp AACTATCCAGGCAGCTTGTGTTCAGTCCTGACTAAATaGATTTTGGATCAGGCACCTGCCTTCAACATTTCT +
Preference number: 6 (lower is better)
Translates to: NYPGSLCSVLTK*ILDQAPAFNIS
Trigger: AGAAATGTTGAAGGCAGGTGCCTGATCCAAAATGCATTTAGTCAGGACTGAACACAAGCTGCCTGGATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434267.5
ENST00000633710.1
ENST00000683076.1
CDS CCA 72 bp TTTGTCCTGCAAATATTGAAGTATCAGCTGTCGCACTaGAGGGAAAGACCAAATCTGCCAGGTCATCATCAT +
Preference number: 6 (lower is better)
Translates to: FVLQILKYQLSH*RERPNLPGHHH
Trigger: ATGATGATGACCTGGCAGATTTGGTCTTTCCCTCCAGTGCGACAGCTGATACTTCAATATTTGCAGGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000482752.1
ENST00000683076.1
CDS CCA 72 bp GGAGGAGCTTCGACTTTGCTATGTAAGAAATCTGACTaGATTTCTGGTGTTGGCAAGGAAACGCTTTCCAAT +
Preference number: 6 (lower is better)
Translates to: GGASTLLCKKSD*ISGVGKETLSN
Trigger: ATTGGAAAGCGTTTCCTTGCCAACACCAGAAATCCAGTCAGATTTCTTACATAGCAAAGTCGAAGCTCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp AAATCTTATCTTTGGGTTCTGGGAGTCGAACACCCTTaGAAGCAGTCATTATTACTAACGTATCCGCCACCT +
Preference number: 6 (lower is better)
Translates to: KSYLWVLGVEHP*KQSLLLTYPPP
Trigger: AGGTGGCGGATACGTTAGTAATAATGACTGCTTCCAAGGGTGTTCGACTCCCAGAACCCAAAGATAAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp AAAATCTTATCTTTGGGTTCTGGGAGTCGAACACCCTaGGAAGCAGTCATTATTACTAACGTATCCGCCACC +
Preference number: 6 (lower is better)
Translates to: KILSLGSGSRTP*EAVIITNVSAT
Trigger: GGTGGCGGATACGTTAGTAATAATGACTGCTTCCAAGGGTGTTCGACTCCCAGAACCCAAAGATAAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp CAAGCAAACAGCGGACTTCAGTTGCTTATGTCTCTCTaGTTCCTGGATTGTAGACTTTGGCAAAAGTGGAGT +
Preference number: 6 (lower is better)
Translates to: QANSGLQLLMSL*FLDCRLWQKWS
Trigger: ACTCCACTTTTGCCAAAGTCTACAATCCAGGAACAAGAGAGACATAAGCAACTGAAGTCCGCTGTTTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683076.1
CDS CAA 90 bp CAGGTTGGAAACAAAAGTTGGTATCTTCTGGCCAGTTCTGGCTATTaGGGTATTCCTGGTAGGCCATTTTCTCTTCAAGGAATTCAGTTG +
Preference number: 6 (lower is better)
Translates to: QVGNKSWYLLASSGY*GIPGRPFSLQGIQL
Trigger: CAACTGAATTCCTTGAAGAGAAAATGGCCTACCAGGAATACCCAAATAGCCAGAACTGGCCAGAAGATACCAACTTTTGTTTCCAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp ACATACCGTAACTGTCTTTCAAGGGATCATTTTGTCCTGCAAATATaGAAGTATCAGCTGTCGCACTGGAGGGAAAGACCAAATCTGCCA +
Preference number: 6 (lower is better)
Translates to: TYRNCLSRDHFVLQI*KYQLSHWRERPNLP
Trigger: TGGCAGATTTGGTCTTTCCCTCCAGTGCGACAGCTGATACTTCAATATTTGCAGGACAAAATGATCCCTTGAAAGACAGTTACGGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp CTTCAATTCCCTGGTCCCCTGTGGTTTCCATGGGAACATGTATTTTaGTTGCATCTATCTTATTCTCCAGAATGTGCTTCTCAGGAGAAC +
Preference number: 6 (lower is better)
Translates to: LQFPGPLWFPWEHVF*LHLSYSPECASQEN
Trigger: GTTCTCCTGAGAAGCACATTCTGGAGAATAAGATAGATGCAACAAAAATACATGTTCCCATGGAAACCACAGGGGACCAGGGAATTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp ATTATTACTAACGTATCCGCCACCTCTGAAGGAGGAGCTTCGACTTaGCTATGTAAGAAATCTGACTGGATTTCTGGTGTTGGCAAGGAA +
Preference number: 6 (lower is better)
Translates to: IITNVSATSEGGAST*LCKKSDWISGVGKE
Trigger: TTCCTTGCCAACACCAGAAATCCAGTCAGATTTCTTACATAGCAAAGTCGAAGCTCCTCCTTCAGAGGTGGCGGATACGTTAGTAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp CTATTCCGTAACTGTCTTTCAAGGGATCATTTTGTCCTGCAAATATaGAAGTATCAGCTGTCGCACTGGAGGGAAAGACCAAATCTGCCA +
Preference number: 6 (lower is better)
Translates to: LFRNCLSRDHFVLQI*KYQLSHWRERPNLP
Trigger: TGGCAGATTTGGTCTTTCCCTCCAGTGCGACAGCTGATACTTCAATATTTGCAGGACAAAATGATCCCTTGAAAGACAGTTACGGAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482752.1
CDS TCA 72 bp ACTACATCTCCTGTTTCTGTGCTAACACCAGAAGTCTaGGTCATGCCTGATCCACTTTCCAAAGGAATCAAT +
Preference number: 6 (lower is better)
Translates to: TTSPVSVLTPEV*VMPDPLSKGIN
Trigger: ATTGATTCCTTTGGAAAGTGGATCAGGCATGACTCAGACTTCTGGTGTTAGCACAGAAACAGGAGATGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp GTCAACTGCTTCCACTGTGGGTGTATCTGGTGTATGTaGGAACGAAGAATCATGCATTTTGGGGAAAGTAAA +
Preference number: 6 (lower is better)
Translates to: VNCFHCGCIWCM*ERRIMHFGESK
Trigger: TTTACTTTCCCCAAAATGCATGATTCTTCGTTCTCACATACACCAGATACACCCACAGTGGAAGCAGTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp ACAAAAGTTGGTATCTTCTGGCCAGTTCTGGCTATTTaGGTATTCCTGGTAGGCCATTTTCTCTTCAAGGAA +
Preference number: 6 (lower is better)
Translates to: TKVGIFWPVLAI*VFLVGHFLFKE
Trigger: TTCCTTGAAGAGAAAATGGCCTACCAGGAATACCCAAATAGCCAGAACTGGCCAGAAGATACCAACTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp AATACTACCAGTATCTCCATCCTTCCCTTCAAAAGGTaGGTTAAGGATTTCTTCCTTCCTCTCCATTCTAGC +
Preference number: 6 (lower is better)
Translates to: NTTSISILPFKR*VKDFFLPLHSS
Trigger: GCTAGAATGGAGAGGAAGGAAGAAATCCTTAACCCACCTTTTGAAGGGAAGGATGGAGATACTGGTAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp AACAAAAGTTGGTATCTTCTGGCCAGTTCTGGCTATTaGGGTATTCCTGGTAGGCCATTTTCTCTTCAAGGA +
Preference number: 6 (lower is better)
Translates to: NKSWYLLASSGY*GIPGRPFSLQG
Trigger: TCCTTGAAGAGAAAATGGCCTACCAGGAATACCCAAATAGCCAGAACTGGCCAGAAGATACCAACTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000423088.5
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp AACTGTCTTTCAAGGGATCATTTTGTCCTGCAAATATaGAAGTATCAGCTGTCGCACTGGAGGGAAAGACCA +
Preference number: 6 (lower is better)
Translates to: NCLSRDHFVLQI*KYQLSHWRERP
Trigger: TGGTCTTTCCCTCCAGTGCGACAGCTGATACTTCAATATTTGCAGGACAAAATGATCCCTTGAAAGACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360240.10
ENST00000395734.7
ENST00000426837.6
ENST00000482752.1
ENST00000683076.1
CDS CAA 72 bp CCCTCTTTAAGTCTGATATCCAAAGGGGTTTCTACATaGTATGCAGAAACTTCTGCTAGGGGTCCTTTCAGA +
Preference number: 6 (lower is better)
Translates to: PSLSLISKGVST*YAETSARGPFR
Trigger: TCTGAAAGGACCCCTAGCAGAAGTTTCTGCATACAATGTAGAAACCCCTTTGGATATCAGACTTAAAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CAA 72 bp CTTCCTTCCTTGCTCTGGTTATTGACACCCATATCTTaGACTACATCTCCTGTTTCTGTGCTAACACCAGAA +
Preference number: 6 (lower is better)
Translates to: LPSLLWLLTPIS*TTSPVSVLTPE
Trigger: TTCTGGTGTTAGCACAGAAACAGGAGATGTAGTCAAAGATATGGGTGTCAATAACCAGAGCAAGGAAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp CAATTCCCTGGTCCCCTGTGGTTTCCATGGGAACATGTATTTTTGTaGCATCTATCTTATTCTCCAGAATGTGCTTCTCAGGAGAACTAT +
Preference number: 6 (lower is better)
Translates to: QFPGPLWFPWEHVFL*HLSYSPECASQENY
Trigger: ATAGTTCTCCTGAGAAGCACATTCTGGAGAATAAGATAGATGCAACAAAAATACATGTTCCCATGGAAACCACAGGGGACCAGGGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp TTAATGATTTGGAAATCTGGGCTGGGGCTATCTCTTGCCCATTTTTaGCCAAGGTATCTGGAAAGGAATCACCTTCCTTTACTACTTGAG +
Preference number: 6 (lower is better)
Translates to: LMIWKSGLGLSLAHF*PRYLERNHLPLLLE
Trigger: CTCAAGTAGTAAAGGAAGGTGATTCCTTTCCAGATACCTTGGCAAAAAATGGGCAAGAGATAGCCCCAGCCCAGATTTCCAAATCATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS TCA 72 bp AGCTTTTGTGCTTTGTCTTCCAGTAAGTCAGGAATCTaGACTGCAACAGACCCTTCTTTAGTCTCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: SFCALSSSKSGI*TATDPSLVSFS
Trigger: AGAGAAAGAGACTAAAGAAGGGTCTGTTGCAGTTCAGATTCCTGACTTACTGGAAGACAAAGCACAAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS GCA 72 bp TCCATCATTACTCCTTTTACTTGGTTTGTCAGCCACTaGAGTGTATCTATTGGCTGCATCTGTCTTATTCTC +
Preference number: 6 (lower is better)
Translates to: SIITPFTWFVSH*SVSIGCICLIL
Trigger: GAGAATAAGACAGATGCAGCCAATAGATACACTGCAGTGGCTGACAAACCAAGTAAAAGGAGTAATGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1
CDS CCA 72 bp CTCCATCTTTGGTGTAGTTATCTACCATTAATGATTTaGAAATCTGGGCTGGGGCTATCTCTTGCCCATTTT +
Preference number: 6 (lower is better)
Translates to: LHLWCSYLPLMI*KSGLGLSLAHF
Trigger: AAAATGGGCAAGAGATAGCCCCAGCCCAGATTTCCAAATCATTAATGGTAGATAACTACACCAAAGATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383736.3
ENST00000426837.6
ENST00000683076.1
CDS CAA 90 bp TTTAGTTCTTTATCCTCTTCAGCTCCTTCAGGAAACTCCTTCAGTTaGACATTCTGCAGTTTAGTCATTTTACTTTCATTATTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: FSSLSSSAPSGNSFS*TFCSLVILLSLFPS
Trigger: AGAAGGGAATAATGAAAGTAAAATGACTAAACTGCAGAATGTCAAACTGAAGGAGTTTCCTGAAGGAGCTGAAGAGGATAAAGAACTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426837.6
ENST00000683076.1