RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP3K9 (Homo sapiens)

Ensembl gene IDs: ENSG00000006432

Ensembl transcript IDs: ENST00000381250.8, ENST00000553414.5, ENST00000554024.1, ENST00000554146.1, ENST00000554752.7, ENST00000555993.6

Found 1200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAACAGGCAGCACACTATTTCTGAAACCTGGCCTTGGACTTCAGTaGGCGCAGGGCAAGGAACACCACGGCCCTGGGGCCCTCGCTCCC +
Preference number: 1 (lower is better)
Translates to: GTGSTLFLKPGLGLQ*AQGKEHHGPGALAP
Trigger: GGGAGCGAGGGCCCCAGGGCCGTGGTGTTCCTTGCCCTGCGCTCACTGAAGTCCAAGGCCAGGTTTCAGAAATAGTGTGCTGCCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp GGGGCCCTCGCTCCCCAGGGCTCCGCTTGTGACTACTCTGACCTCTaGGTTCAGAATGCCCAGACGTCTATCCCTCATGTTCCGGTAGGA +
Preference number: 1 (lower is better)
Translates to: GALAPQGSACDYSDL*VQNAQTSIPHVPVG
Trigger: TCCTACCGGAACATGAGGGATAGACGTCTGGGCATTCTGAACCCAGAGGTCAGAGTAGTCACAAGCGGAGCCCTGGGGAGCGAGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp ATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTaGGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTG +
Preference number: 1 (lower is better)
Translates to: IISARSRAGSQGVQP*ERAVPASSPHLRWL
Trigger: CAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
3UTR TCA 90 bp GTAAGAATCAGGAAGGACCAGTCCCACCGGCTCCTGATCATGGAGTaGGCCCAACACGAAGAGCAAAGCCAGGGCTCCCTAGGCAGCCTA +
Preference number: 1 (lower is better)
Translates to: VRIRKDQSHRLLIME*AQHEEQSQGSLGSL
Trigger: TAGGCTGCCTAGGGAGCCCTGGCTTTGCTCTTCGTGTTGGGCTCACTCCATGATCAGGAGCCGGTGGGACTGGTCCTTCCTGATTCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp GGAAACAGGGCGAGGAAGGCAGCCAGCAGCATCAAGGATGTCAGCTaGGACGTGCGAGGGTTCAAGTCCAGTCACAGGCAGATGACAGGT +
Preference number: 1 (lower is better)
Translates to: GNRARKAASSIKDVS*DVRGFKSSHRQMTG
Trigger: ACCTGTCATCTGCCTGTGACTGGACTTGAACCCTCGCACGTCTCAGCTGACATCCTTGATGCTGCTGGCTGCCTTCCTCGCCCTGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp TCTCTCTATCCAGCTCAAGGCCCAAAGCAGGCTCCCCGTAGGGGATaGGGAACCACAGACAGTAAGAATCAGGAAGGACCAGTCCCACCG +
Preference number: 1 (lower is better)
Translates to: SLYPAQGPKQAPRRG*GTTDSKNQEGPVPP
Trigger: CGGTGGGACTGGTCCTTCCTGATTCTTACTGTCTGTGGTTCCCCATCCCCTACGGGGAGCCTGCTTTGGGCCTTGAGCTGGATAGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp AAGGATCTCAGGAACAGGCAGCACACTATTTCTGAAACCTGGCCTTaGACTTCAGTGAGCGCAGGGCAAGGAACACCACGGCCCTGGGGC +
Preference number: 1 (lower is better)
Translates to: KDLRNRQHTISETWP*TSVSAGQGTPRPWG
Trigger: GCCCCAGGGCCGTGGTGTTCCTTGCCCTGCGCTCACTGAAGTCCAAGGCCAGGTTTCAGAAATAGTGTGCTGCCTGTTCCTGAGATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp GCCTCTGCTATCCTTCCTACTCAGCTCATGGTCCAGAGCCCAGCATaGGGGGCTACCTGTGCACAGGCCTTGGTCAGTTTTCAGTATGGG +
Preference number: 1 (lower is better)
Translates to: ASAILPTQLMVQSPA*GATCAQALVSFQYG
Trigger: CCCATACTGAAAACTGACCAAGGCCTGTGCACAGGTAGCCCCTCATGCTGGGCTCTGGACCATGAGCTGAGTAGGAAGGATAGCAGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp GCAGCCTACAGAGGCCCCCGTACTTCCAGGGCCCAAGACGGGAAATaGATGAGGAAGCGGGTGGACATGACTGTCAATATCTCATCAGGA +
Preference number: 1 (lower is better)
Translates to: AAYRGPRTSRAQDGK*MRKRVDMTVNISSG
Trigger: TCCTGATGAGATATTGACAGTCATGTCCACCCGCTTCCTCATCCATTTCCCGTCTTGGGCCCTGGAAGTACGGGGGCCTCTGTAGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp ACCCAACTGGCTGAGGAGAGGGAGCAGCAGACAGATTTGGCTGAGTaGCTCTGCAGGGTCACTCTAAAGGCAAGGAAGACTGTGGAGGGT +
Preference number: 1 (lower is better)
Translates to: TQLAEEREQQTDLAE*LCRVTLKARKTVEG
Trigger: ACCCTCCACAGTCTTCCTTGCCTTTAGAGTGACCCTGCAGAGTCACTCAGCCAAATCTGTCTGCTGCTCCCTCTCCTCAGCCAGTTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR TCA 90 bp ATGTCAGCTGAGACGTGCGAGGGTTCAAGTCCAGTCACAGGCAGATaGCAGGTGAGCCAAGGACACAACTCCTCCTTGGGCAAAGGGCAA +
Preference number: 1 (lower is better)
Translates to: MSAETCEGSSPVTGR*QVSQGHNSSLGKGQ
Trigger: TTGCCCTTTGCCCAAGGAGGAGTTGTGTCCTTGGCTCACCTGTCATCTGCCTGTGACTGGACTTGAACCCTCGCACGTCTCAGCTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 90 bp AGGGCCACAAGAGGGCCATTTAGTGGAGCCAAGGATATACAGATGTaGTCATGGTTTAGCCTGAGGTTATGGAGGGCCCGGGGGAAGGAG +
Preference number: 1 (lower is better)
Translates to: RATRGPFSGAKDIQM*SWFSLRLWRARGKE
Trigger: CTCCTTCCCCCGGGCCCTCCATAACCTCAGGCTAAACCATGAGCACATCTGTATATCCTTGGCTCCACTAAATGGCCCTCTTGTGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 90 bp GCCCAGACGTCTATCCCTCATGTTCCGGTAGGAGAGGCCTGTCTGTaGACCCCTGGAATGGTATTCTGCTGTCCAATCCTGAGACACCTA +
Preference number: 1 (lower is better)
Translates to: AQTSIPHVPVGEACL*TPGMVFCCPILRHL
Trigger: TAGGTGTCTCAGGATTGGACAGCAGAATACCATTCCAGGGGTGCACAGACAGGCCTCTCCTACCGGAACATGAGGGATAGACGTCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp GCTACTACTATACAGATCCTTAGCCCATCTCCAACCTTGCCCCACTaGGAGAGTGCAGCAGTCAGGGGCCCATCAGAGACCAGGTGTGTA +
Preference number: 1 (lower is better)
Translates to: ATTIQILSPSPTLPH*ESAAVRGPSETRCV
Trigger: TACACACCTGGTCTCTGATGGGCCCCTGACTGCTGCACTCTCTCAGTGGGGCAAGGTTGGAGATGGGCTAAGGATCTGTATAGTAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp AGCTCCAGGGCCTGCTCCCGACCAGGACCACAGAACAAGGGAACCTaGGCGAATAGAAAGCCACTGAGACCTGCTACTACTATACAGATC +
Preference number: 1 (lower is better)
Translates to: SSRACSRPGPQNKGT*ANRKPLRPATTIQI
Trigger: GATCTGTATAGTAGTAGCAGGTCTCAGTGGCTTTCTATTCGCTCAGGTTCCCTTGTTCTGTGGTCCTGGTCGGGAGCAGGCCCTGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp CTGAGACGTGCGAGGGTTCAAGTCCAGTCACAGGCAGATGACAGGTaGGCCAAGGACACAACTCCTCCTTGGGCAAAGGGCAATCTCAAA +
Preference number: 1 (lower is better)
Translates to: LRRARVQVQSQADDR*AKDTTPPWAKGNLK
Trigger: TTTGAGATTGCCCTTTGCCCAAGGAGGAGTTGTGTCCTTGGCTCACCTGTCATCTGCCTGTGACTGGACTTGAACCCTCGCACGTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp TGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCTGAAGTaGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTG +
Preference number: 1 (lower is better)
Translates to: WTRVERPCRAGDPLK*PCFHPFHLQSALSV
Trigger: CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
3UTR CCA 90 bp ACAAGAGGGCCATTTAGTGGAGCCAAGGATATACAGATGTGCTCATaGTTTAGCCTGAGGTTATGGAGGGCCCGGGGGAAGGAGGCCACA +
Preference number: 1 (lower is better)
Translates to: TRGPFSGAKDIQMCS*FSLRLWRARGKEAT
Trigger: TGTGGCCTCCTTCCCCCGGGCCCTCCATAACCTCAGGCTAAACCATGAGCACATCTGTATATCCTTGGCTCCACTAAATGGCCCTCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp GAACTGGCACCAGTGAGTGAGTCCCCCAAGAAACTATTCCTGGGATaGGCAGATGATTGTATCCGAACCTGGTCTGACGAGGTCCTGACC +
Preference number: 1 (lower is better)
Translates to: ELAPVSESPKKLFLG*ADDCIRTWSDEVLT
Trigger: GGTCAGGACCTCGTCAGACCAGGTTCGGATACAATCATCTGCTCATCCCAGGAATAGTTTCTTGGGGGACTCACTCACTGGTGCCAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp GAGTGCAGCAGTCAGGGGCCCATCAGAGACCAGGTGTGTAGGAGCTaGGAGATGGTAACTGTTCCTTCTTCATGGATGCTCACAGTAGCA +
Preference number: 1 (lower is better)
Translates to: ECSSQGPIRDQVCRS*EMVTVPSSWMLTVA
Trigger: TGCTACTGTGAGCATCCATGAAGAAGGAACAGTTACCATCTCTCAGCTCCTACACACCTGGTCTCTGATGGGCCCCTGACTGCTGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 90 bp TTCCCTTCTCCAGAGAACACACACACACACAAGTGCCCTCAGGGCTaGAGAGCCAGAAAGGCAGCCAGAGAACACCAAGGAAATGTCACA +
Preference number: 1 (lower is better)
Translates to: FPSPENTHTHKCPQG*RARKAAREHQGNVT
Trigger: TGTGACATTTCCTTGGTGTTCTCTGGCTGCCTTTCTGGCTCTGCAGCCCTGAGGGCACTTGTGTGTGTGTGTGTTCTCTGGAGAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 90 bp TGCCATAATCACTTCCCTTCTCCAGAGAACACACACACACACAAGTaGCCTCAGGGCTGCAGAGCCAGAAAGGCAGCCAGAGAACACCAA +
Preference number: 1 (lower is better)
Translates to: CHNHFPSPENTHTHK*PQGCRARKAAREHQ
Trigger: TTGGTGTTCTCTGGCTGCCTTTCTGGCTCTGCAGCCCTGAGGGCACTTGTGTGTGTGTGTGTTCTCTGGAGAAGGGAAGTGATTATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp AATGCTTGTCAACACCAGATGCTATATAAATGCGGCAGAAGGGCATaGGCCCGACCAGGGCCCCCATTAGTCATGCTCAACCACCTCCAA +
Preference number: 1 (lower is better)
Translates to: NACQHQMLYKCGRRA*ARPGPPLVMLNHLQ
Trigger: TTGGAGGTGGTTGAGCATGACTAATGGGGGCCCTGGTCGGGCCCATGCCCTTCTGCCGCATTTATATAGCATCTGGTGTTGACAAGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp AGAGGCTCACGGCCTTCAGTGGTATTGGGAGAAGAGCTACAGAATTaGCATGTCCAGCTCCTGTGTGCTTCAAACCCCTGGAGTCATGGA +
Preference number: 1 (lower is better)
Translates to: RGSRPSVVLGEELQN*HVQLLCASNPWSHG
Trigger: TCCATGACTCCAGGGGTTTGAAGCACACAGGAGCTGGACATGTCAATTCTGTAGCTCTTCTCCCAATACCACTGAAGGCCGTGAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 90 bp GGGGAATTAGGAAAGAATGCTTGTCAACACCAGATGCTATATAAATaGGGCAGAAGGGCATGGGCCCGACCAGGGCCCCCATTAGTCATG +
Preference number: 1 (lower is better)
Translates to: GELGKNACQHQMLYK*GRRAWARPGPPLVM
Trigger: CATGACTAATGGGGGCCCTGGTCGGGCCCATGCCCTTCTGCCGCATTTATATAGCATCTGGTGTTGACAAGCATTCTTTCCTAATTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 90 bp GGTATTGGGAGAAGAGCTACAGAATTGACATGTCCAGCTCCTGTGTaGTTCAAACCCCTGGAGTCATGGAGAGGAAACAGGGCGAGGAAG +
Preference number: 1 (lower is better)
Translates to: GIGRRATELTCPAPV*FKPLESWRGNRARK
Trigger: CTTCCTCGCCCTGTTTCCTCTCCATGACTCCAGGGGTTTGAAGCACACAGGAGCTGGACATGTCAATTCTGTAGCTCTTCTCCCAATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp TGGGATGAGCAGATGATTGTATCCGAACCTGGTCTGACGAGGTCCTaGCCCCAAGTAGCTAGATGGGTACCCTCAATACTTGCTGGTTTG +
Preference number: 1 (lower is better)
Translates to: WDEQMIVSEPGLTRS*PQVARWVPSILAGL
Trigger: CAAACCAGCAAGTATTGAGGGTACCCATCTAGCTACTTGGGGTCAGGACCTCGTCAGACCAGGTTCGGATACAATCATCTGCTCATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp TGGATGGCCCAGTTGAGAGTGAATTCCCAAGTCCCAATGTCCAGGTaGCCATATGGTATTCTGCTTCATAGCTGTTCTAGGGCATTGCGG +
Preference number: 1 (lower is better)
Translates to: WMAQLRVNSQVPMSR*PYGILLHSCSRALR
Trigger: CCGCAATGCCCTAGAACAGCTATGAAGCAGAATACCATATGGCCACCTGGACATTGGGACTTGGGAATTCACTCTCAACTGGGCCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp GACCAGGACCACAGAACAAGGGAACCTGAGCGAATAGAAAGCCACTaGGACCTGCTACTACTATACAGATCCTTAGCCCATCTCCAACCT +
Preference number: 1 (lower is better)
Translates to: DQDHRTREPERIESH*DLLLLYRSLAHLQP
Trigger: AGGTTGGAGATGGGCTAAGGATCTGTATAGTAGTAGCAGGTCTCAGTGGCTTTCTATTCGCTCAGGTTCCCTTGTTCTGTGGTCCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp ACAAGCTACAATAAGGCTTCCAAGCTCAAGAGACTGAGAGAAAAGTaGGGAGAAGCTGGAATGAAGAGCAGCAACAGGGCACCTGCAGGC +
Preference number: 1 (lower is better)
Translates to: TSYNKASKLKRLREK*GEAGMKSSNRAPAG
Trigger: GCCTGCAGGTGCCCTGTTGCTGCTCTTCATTCCAGCTTCTCCTCACTTTTCTCTCAGTCTCTTGAGCTTGGAAGCCTTATTGTAGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 90 bp GGTGTACCATTCACAGCCATCCAGTCTTCAGTGCCCTCTGCTCTTTaGTTTGTTAAAAGTGAGCTGGATGAGTTAGGATTGCTCGGGAGG +
Preference number: 1 (lower is better)
Translates to: GVPFTAIQSSVPSAL*FVKSELDELGLLGR
Trigger: CCTCCCGAGCAATCCTAACTCATCCAGCTCACTTTTAACAAAGCAAAGAGCAGAGGGCACTGAAGACTGGATGGCTGTGAATGGTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 90 bp AAATTCACACACCCAGGAAGTAGGCAGCTTTTATCACCAGGTTCCTaGCAACACGGTTTCAACCCCAAGGTGTACCATTCACAGCCATCC +
Preference number: 1 (lower is better)
Translates to: KFTHPGSRQLLSPGS*QHGFNPKVYHSQPS
Trigger: GGATGGCTGTGAATGGTACACCTTGGGGTTGAAACCGTGTTGGCAGGAACCTGGTGATAAAAGCTGCCTACTTCCTGGGTGTGTGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 90 bp CTTTTCTGCACCAAGGGAAGCAATCTGGCAAGGCTGCAGTTTCTGTaGAGGACTCATGGCCCCAGGACCATACATTTGAAAGTTAGAAGG +
Preference number: 1 (lower is better)
Translates to: LFCTKGSNLARLQFL*RTHGPRTIHLKVRR
Trigger: CCTTCTAACTTTCAAATGTATGGTCCTGGGGCCATGAGTCCTGCACAGAAACTGCAGCCTTGCCAGATTGCTTCCCTTGGTGCAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp GCAAATGCAAGGAACCTGCTGAGTGACCTCCAAGACAAAAGACAGTaGAGCAGCATTCAGAGAGTCTTGAGGGAAGAGGGGAATGACCTT +
Preference number: 1 (lower is better)
Translates to: ANARNLLSDLQDKRQ*SSIQRVLREEGNDL
Trigger: AAGGTCATTCCCCTCTTCCCTCAAGACTCTCTGAATGCTGCTCCACTGTCTTTTGTCTTGGAGGTCACTCAGCAGGTTCCTTGCATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp ATCTCTGCTTCATACCACAGAGCACTGTGTATAGGCAGCATGGTTTaGAGGGCCACAAGAGGGCCATTTAGTGGAGCCAAGGATATACAG +
Preference number: 1 (lower is better)
Translates to: ISASYHRALCIGSMV*RATRGPFSGAKDIQ
Trigger: CTGTATATCCTTGGCTCCACTAAATGGCCCTCTTGTGGCCCTCCAAACCATGCTGCCTATACACAGTGCTCTGTGGTATGAAGCAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp CAACTCCTCCTTGGGCAAAGGGCAATCTCAAAACCTCGGTGGACCTaGGCTAGGCCAACTTTATCTCAAGAGCTTCTAAGTAGTGGCTTA +
Preference number: 1 (lower is better)
Translates to: QLLLGQRAISKPRWT*ARPTLSQELLSSGL
Trigger: TAAGCCACTACTTAGAAGCTCTTGAGATAAAGTTGGCCTAGCTCAGGTCCACCGAGGTTTTGAGATTGCCCTTTGCCCAAGGAGGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp CCTCTAGGAGCTGGCAAGGAGCTATGGTGTTTCACTGACCTTCTCTaGTACATACACCCAACTCCCTTGAGAGGAAAGCATGTGATGATT +
Preference number: 1 (lower is better)
Translates to: PLGAGKELWCFTDLL*YIHPTPLRGKHVMI
Trigger: AATCATCACATGCTTTCCTCTCAAGGGAGTTGGGTGTATGTATCAGAGAAGGTCAGTGAAACACCATAGCTCCTTGCCAGCTCCTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp AAAGAAGCTTCCTCTAGGAGCTGGCAAGGAGCTATGGTGTTTCACTaGCCTTCTCTGATACATACACCCAACTCCCTTGAGAGGAAAGCA +
Preference number: 1 (lower is better)
Translates to: KEASSRSWQGAMVFH*PSLIHTPNSLERKA
Trigger: TGCTTTCCTCTCAAGGGAGTTGGGTGTATGTATCAGAGAAGGTCAGTGAAACACCATAGCTCCTTGCCAGCTCCTAGAGGAAGCTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp TATTTCCTTAGCAAAGACCCAGGCTTGCTTTATCTTTCCCCACAGTaGACAAGTAAGGATGGCACTCAACCTCTCACTCAATGGCAGGTG +
Preference number: 1 (lower is better)
Translates to: YFLSKDPGLLYLSPQ*TSKDGTQPLTQWQV
Trigger: CACCTGCCATTGAGTGAGAGGTTGAGTGCCATCCTTACTTGTCCACTGTGGGGAAAGATAAAGCAAGCCTGGGTCTTTGCTAAGGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp ATCCCAAAGCAAAGTGGGAATTCAAGGACACGGGGTCAGGACACATaGACAAGACACTGGAGCAGAGAAGGTCTAGGGATAAAAACTAGT +
Preference number: 1 (lower is better)
Translates to: IPKQSGNSRTRGQDT*TRHWSREGLGIKTS
Trigger: ACTAGTTTTTATCCCTAGACCTTCTCTGCTCCAGTGTCTTGTTCATGTGTCCTGACCCCGTGTCCTTGAATTCCCACTTTGCTTTGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 90 bp AGAGCAGTATCTGTTCCTATTACCATCTTCCATGAAGTTAGCACCTaGCAAGAGCAGAAGGAACGTGTCTTTGTGCAAAGGGAAGGCAGA +
Preference number: 1 (lower is better)
Translates to: RAVSVPITIFHEVST*QEQKERVFVQREGR
Trigger: TCTGCCTTCCCTTTGCACAAAGACACGTTCCTTCTGCTCTTGGCAGGTGCTAACTTCATGGAAGATGGTAATAGGAACAGATACTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp TCCCCACAGTGGACAAGTAAGGATGGCACTCAACCTCTCACTCAATaGCAGGTGACCATCATTCAGTTACACTACATCAGTTACACTACA +
Preference number: 1 (lower is better)
Translates to: SPQWTSKDGTQPLTQ*QVTIIQLHYISYTT
Trigger: TGTAGTGTAACTGATGTAGTGTAACTGAATGATGGTCACCTGCCATTGAGTGAGAGGTTGAGTGCCATCCTTACTTGTCCACTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp TATCAAAATTTTAAGTCAGGCTTTGTCTGGGTTGGTGTCCAGGTGTaGAGGATCTCAGGAACAGGCAGCACACTATTTCTGAAACCTGGC +
Preference number: 1 (lower is better)
Translates to: YQNFKSGFVWVGVQV*RISGTGSTLFLKPG
Trigger: GCCAGGTTTCAGAAATAGTGTGCTGCCTGTTCCTGAGATCCTTCACACCTGGACACCAACCCAGACAAAGCCTGACTTAAAATTTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp AGACAACTGTTCACACATAACACAGGAGGCCTCAGAGTAGTGGCATaGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACATTC +
Preference number: 1 (lower is better)
Translates to: RQLFTHNTGGLRVVA*RRHTRESFRGSSTF
Trigger: GAATGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCTGAGGCCTCCTGTGTTATGTGTGAACAGTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp AGCATGCCAGGGAGTGAAAAAGCCTCCGTTCACTTTAGTCCCTTCTaGAATCTGGACGAGAGAATGAATGAAGTTCATTCACTTCTGGAA +
Preference number: 1 (lower is better)
Translates to: SMPGSEKASVHFSPF*NLDERMNEVHSLLE
Trigger: TTCCAGAAGTGAATGAACTTCATTCATTCTCTCGTCCAGATTTCAGAAGGGACTAAAGTGAACGGAGGCTTTTTCACTCCCTGGCATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 90 bp AAAGTTAGCACTATTCTGAGTTGTCCAGATGTAAGATATCATTGTTaGTATTACTGCTACCACCAGACCCTAGGGATGCCACAGGATGCC +
Preference number: 1 (lower is better)
Translates to: KVSTILSCPDVRYHC*YYCYHQTLGMPQDA
Trigger: GGCATCCTGTGGCATCCCTAGGGTCTGGTGGTAGCAGTAATAGCAACAATGATATCTTACATCTGGACAACTCAGAATAGTGCTAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 90 bp AGTGGACAAGTAAGGATGGCACTCAACCTCTCACTCAATGGCAGGTaGCCATCATTCAGTTACACTACATCAGTTACACTACATCTAGAA +
Preference number: 1 (lower is better)
Translates to: SGQVRMALNLSLNGR*PSFSYTTSVTLHLE
Trigger: TTCTAGATGTAGTGTAACTGATGTAGTGTAACTGAATGATGGTCACCTGCCATTGAGTGAGAGGTTGAGTGCCATCCTTACTTGTCCACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 90 bp CCATCATTCAGTTACACTACATCAGTTACACTACATCTAGAAAGATaGCTGCAACCTACCACAATGGCAAAAGTTAAAAATGAGCAAAGG +
Preference number: 1 (lower is better)
Translates to: PSFSYTTSVTLHLER*LQPTTMAKVKNEQR
Trigger: CCTTTGCTCATTTTTAACTTTTGCCATTGTGGTAGGTTGCAGCCATCTTTCTAGATGTAGTGTAACTGATGTAGTGTAACTGAATGATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR TCA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCACAGGGGGTCCAACCCTaGGAAAGGGCTGTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPQGVQP*ERAVPA
Trigger: GGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTG...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR CCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCATCCCCTCATCTCCGCTaGCTGTCCCCCTTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPSPHLR*LSPLPA
Trigger: GGCGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGA...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR GCA 90 bp TACAGAGGCCCCCGTACTTCCAGGGCCCAAGACGGGAAATGGATGAGGAAGCGGCGGGTAGAAAGGCCCTaGAGGGCAGGAGACCCTCTG +
Preference number: 2 (lower is better)
Translates to: YRGPRTSRAQDGKWMRKRRVERP*RAGDPL
Trigger: CAGAGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCG...CCGCTTCCTCATCCATTTCCCGTCTTGGGCCCTGGAAGTACGGGGGCCTCTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR CCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACTCCCCTCATCTCCGCTaGCTGTCCCCCTTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDSPHLR*LSPLPA
Trigger: GGCGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGA...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR TCA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCAGCAGACAGATTTGGCTaGGTGACTCTGCAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPADRFG*VTLQGH
Trigger: GTGACCCTGCAGAGTCACTCAGCCAAATCTGTCTGC...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR GCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACCTGAGAAAGGGCTGTaGCCGCCAGCTCCCCTCATC +
Preference number: 2 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQPEKGL*PPAPLI
Trigger: GATGAGGGGAGCTGGCGGGCACAGCCCTTTCTCAGG...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR GCA 90 bp TACAGAGGCCCCCGTACTTCCAGGGCCCAAGACGGGAAATGGATGAGGAAGCGGAGGCTGCAGTTTCTGTaGAGGACTCATGGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: YRGPRTSRAQDGKWMRKRRLQFL*RTHGPR
Trigger: CCTGGGGCCATGAGTCCTGCACAGAAACTGCAGCCT...CCGCTTCCTCATCCATTTCCCGTCTTGGGCCCTGGAAGTACGGGGGCCTCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR CCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGTCCCCTCATCTCCGCTaGCTGTCCCCCTTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: SALSVQEVGLDLRGSNPESPHLR*LSPLPA
Trigger: GGCGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGA...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR CCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCTGCGCACACCCAACTaGCTGAGGAGAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDLRTPN*LRRGSS
Trigger: GCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGCGCAG...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR CCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTTCCCCTCATCTCCGCTaGCTGTCCCCCTTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPSPHLR*LSPLPA
Trigger: GGCGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGA...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR TCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGCTACACAGCCAGAGCTaGTGGCCACAGCCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGLHSQS*WPQPLQ
Trigger: CTGGAGGGGCTGTGGCCATCAGCTCTGGCTGTGTAG...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR TCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGGCACACCCAACTGGCTaGGGAGAGGGAGCAGCAGAC +
Preference number: 2 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGAHPTG*GEGAAD
Trigger: GTCTGCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGC...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR CCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGCTGCGCACACCCAACTaGCTGAGGAGAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGLRTPN*LRRGSS
Trigger: GCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGCGCAG...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR TCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGACTACACAGCCAGAGCTaGTGGCCACAGCCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: RKAPISNQARFPFLGVGGLHSQS*WPQPLQ
Trigger: CTGGAGGGGCTGTGGCCATCAGCTCTGGCTGTGTAG...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR TCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACGCAGACAGATTTGGCTaGGTGACTCTGCAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDADRFG*VTLQGH
Trigger: GTGACCCTGCAGAGTCACTCAGCCAAATCTGTCTGC...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR GCA 90 bp CCCAAAGCAAAGTGGGAATTCAAGGACACGGGGTCAGGACACATGAACAAGACACACAGCTCCAGGGCCTaGTCCCGACCAGGACCACAG +
Preference number: 2 (lower is better)
Translates to: PKAKWEFKDTGSGHMNKTHSSRA*SRPGPQ
Trigger: CTGTGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTG...TGTCTTGTTCATGTGTCCTGACCCCGTGTCCTTGAATTCCCACTTTGCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGACCACAGCCCCTCCAGTaGACACGGGTAGAAAGGCCC +
Preference number: 2 (lower is better)
Translates to: RKAPISNQARFPFLGVGGPQPLQ*TRVERP
Trigger: GGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR TCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCAGGGGGTCCAACCCTaGGAAAGGGCTGTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: VALFPSLPSSKCIISARSQGVQP*ERAVPA
Trigger: GGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTG...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR TCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGCAGGGGGTCCAACCCTaGGAAAGGGCTGTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKQGVQP*ERAVPA
Trigger: GGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTG...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR TCA 90 bp GGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGCACACCCAACTGGCTaGGGAGAGGGAGCAGCAGAC +
Preference number: 2 (lower is better)
Translates to: GLGHRKAPISNQARFPFLAHPTG*GEGAAD
Trigger: GTCTGCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGC...CAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR CCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCTCCCCTCATCTCCGCTaGCTGTCCCCCTTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLSPHLR*LSPLPA
Trigger: GGCGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGA...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR CCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGGCAAGGAAGACTGTaGAGGGTGGGGGACATGCAT +
Preference number: 2 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDRQGRL*RVGDMH
Trigger: ATGCATGTCCCCCACCCTCCACAGTCTTCCTTGCCT...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR TCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCGCAGACAGATTTGGCTaGGTGACTCTGCAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPADRFG*VTLQGH
Trigger: GTGACCCTGCAGAGTCACTCAGCCAAATCTGTCTGC...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR GCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGGAGGGTGGGGGACATaGATGCACCCCTTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLGGWGT*MHPFLP
Trigger: GGGGAGGAAGGGGTGCATGCATGTCCCCCACCCTCC...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR CCA 90 bp GGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGAAGACTGTGGAGGGTaGGGGACATGCATGCACCCC +
Preference number: 2 (lower is better)
Translates to: GLGHRKAPISNQARFPFLEDCGG*GTCMHP
Trigger: GGGGTGCATGCATGTCCCCCACCCTCCACAGTCTTC...CAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR CAA 90 bp GAGAGGCTCACGGCCTTCAGTGGTATTGGGAGAAGAGCTACAGAATaGACATGTCCAGCTCCTGTGTGCTTCAAACCCCTGGAGTCATGG +
Preference number: 2 (lower is better)
Translates to: ERLTAFSGIGRRATE*TCPAPVCFKPLESW
Trigger: CCATGACTCCAGGGGTTTGAAGCACACAGGAGCTGGACATGTCAATTCTGTAGCTCTTCTCCCAATACCACTGAAGGCCGTGAGCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR TCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGCACACCCAACTGGCTaGGGAGAGGGAGCAGCAGAC +
Preference number: 2 (lower is better)
Translates to: NHRISNTGVWEAELGADKAHPTG*GEGAAD
Trigger: GTCTGCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGC...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR TCA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGACAAAGGGACCCTATaGCAGCTCTGCGCACACCCA +
Preference number: 2 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWDKGTL*QLCAHP
Trigger: TGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTC...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR TCA 90 bp TACAGAGGCCCCCGTACTTCCAGGGCCCAAGACGGGAAATGGATGAGGAAGCGGAAACTATTCCTGGGATaGGCAGATGATTGTATCCGA +
Preference number: 2 (lower is better)
Translates to: YRGPRTSRAQDGKWMRKRKLFLG*ADDCIR
Trigger: TCGGATACAATCATCTGCTCATCCCAGGAATAGTTT...CCGCTTCCTCATCCATTTCCCGTCTTGGGCCCTGGAAGTACGGGGGCCTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR GCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGCCTGAGAAAGGGCTGTaGCCGCCAGCTCCCCTCATC +
Preference number: 2 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKPEKGL*PPAPLI
Trigger: GATGAGGGGAGCTGGCGGGCACAGCCCTTTCTCAGG...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR GCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAACGGGTAGAAAGGCCCTaGAGGGCAGGAGACCCTCTG +
Preference number: 2 (lower is better)
Translates to: NHRISNTGVWEAELGADKRVERP*RAGDPL
Trigger: CAGAGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCG...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR CCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAACCACAGCCCCTCCAGTaGACACGGGTAGAAAGGCCC +
Preference number: 2 (lower is better)
Translates to: NHRISNTGVWEAELGADKPQPLQ*TRVERP
Trigger: GGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR CCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAACTGCGCACACCCAACTaGCTGAGGAGAGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: NHRISNTGVWEAELGADKLRTPN*LRRGSS
Trigger: GCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGCGCAG...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR CAA 90 bp CCCTCTGCTCTTTGCTTTGTTAAAAGTGAGCTGGATGAGTTAGGATaGCTCGGGAGGTGTCTCCTTCACACAAGGGAAGGAGGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: PSALCFVKSELDELG*LGRCLLHTREGGGR
Trigger: CCTCCCTCCTCCTTCCCTTGTGTGAAGGAGACACCTCCCGAGCAATCCTAACTCATCCAGCTCACTTTTAACAAAGCAAAGAGCAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR GCA 90 bp AGAGTAGTGGCATGGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACACCTGAGAAAGGGCTGTaGCCGCCAGCTCCCCTCATC +
Preference number: 2 (lower is better)
Translates to: RVVAWRRHTRESFRGSSTPEKGL*PPAPLI
Trigger: GATGAGGGGAGCTGGCGGGCACAGCCCTTTCTCAGG...TGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR CCA 90 bp CCCAAAGCAAAGTGGGAATTCAAGGACACGGGGTCAGGACACATGAACAAGACACCTATGACCCCACACTaGGCCACCTTGCTTTCAGTC +
Preference number: 2 (lower is better)
Translates to: PKAKWEFKDTGSGHMNKTPMTPH*ATLLSV
Trigger: GACTGAAAGCAAGGTGGCCCAGTGTGGGGTCATAGG...TGTCTTGTTCATGTGTCCTGACCCCGTGTCCTTGAATTCCCACTTTGCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR TCA 90 bp CCCAAAGCAAAGTGGGAATTCAAGGACACGGGGTCAGGACACATGAACAAGACAATCAAGGATGTCAGCTaGGACGTGCGAGGGTTCAAG +
Preference number: 2 (lower is better)
Translates to: PKAKWEFKDTGSGHMNKTIKDVS*DVRGFK
Trigger: CTTGAACCCTCGCACGTCTCAGCTGACATCCTTGAT...TGTCTTGTTCATGTGTCCTGACCCCGTGTCCTTGAATTCCCACTTTGCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR CCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTAGCAGCAGACAGATTTaGCTGAGTGACTCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCSSRQI*LSDSAG
Trigger: CCCTGCAGAGTCACTCAGCCAAATCTGTCTGCTGCT...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR CAA 90 bp CTGGCTCCATTTTACTTCAAGGGCATCACAACATGGATGGCCCAGTaGAGAGTGAATTCCCAAGTCCCAATGTCCAGGTGGCCATATGGT +
Preference number: 2 (lower is better)
Translates to: LAPFYFKGITTWMAQ*RVNSQVPMSRWPYG
Trigger: ACCATATGGCCACCTGGACATTGGGACTTGGGAATTCACTCTCAACTGGGCCATCCATGTTGTGATGCCCTTGAAGTAAAATGGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 90 bp AGCTCAACATTCAAGTTAAGGAAACAACTTCCAGGAAGGTCAGGGTaGGCCTCTGCTATCCTTCCTACTCAGCTCATGGTCCAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: SSTFKLRKQLPGRSG*ASAILPTQLMVQSP
Trigger: TGGGCTCTGGACCATGAGCTGAGTAGGAAGGATAGCAGAGGCCAACCCTGACCTTCCTGGAAGTTGTTTCCTTAACTTGAATGTTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR CCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGAGACCCTCTGAAGTaGCCCTGTTTCCATCCCTTC +
Preference number: 2 (lower is better)
Translates to: NHRISNTGVWEAELGADKGDPLK*PCFHPF
Trigger: GAAGGGATGGAAACAGGGCCACTTCAGAGGGTCTCC...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
3UTR-3UTR CCA 90 bp CCCAAAGCAAAGTGGGAATTCAAGGACACGGGGTCAGGACACATGAACAAGACAAAGGGCATCACAACATaGATGGCCCAGTTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: PKAKWEFKDTGSGHMNKTKGITT*MAQLRV
Trigger: CACTCTCAACTGGGCCATCCATGTTGTGATGCCCTT...TGTCTTGTTCATGTGTCCTGACCCCGTGTCCTTGAATTCCCACTTTGCTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR CCA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCAGCCTTGCGAGTAGCTaGGATTACAGGCACGTGCCA +
Preference number: 2 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFSLASS*DYRHVP
Trigger: TGGCACGTGCCTGTAATCCCAGCTACTCGCAAGGCT...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR CCA 90 bp AATGAGAGACAGCCAACTGTCACTCTGATGTTGCTACCAACCTCCCTCTCTCATCTACTGCCACTCAAGTaGCTTCATCCACAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: NERQPTVTLMLLPTSLSHLLPLK*LHPQLQ
Trigger: CTGGAGCTGTGGATGAAGCCACTTGAGTGGCAGTAG...ATGAGAGAGGGAGGTTGGTAGCAACATCAGAGTGACAGTTGGCTGTCTCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 90 bp CAGAGGAAAAAGAGAGGTGACTTTGGAACCAAGCAGATCAGCAACTaGCTTCCTAGCTGTGTGACCCTGGGCAAATTACAGAGCCATCAG +
Preference number: 2 (lower is better)
Translates to: QRKKRGDFGTKQISN*LPSCVTLGKLQSHQ
Trigger: CTGATGGCTCTGTAATTTGCCCAGGGTCACACAGCTAGGAAGCAAGTTGCTGATCTGCTTGGTTCCAAAGTCACCTCTCTTTTTCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 90 bp ATCTATCCCAGTTATAGAGAAAGAGCAGTGACCAATTCATCACTGTaGCCAGCTGCACATCCAGGCAGCAAATGCAAGGAACCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: IYPSYRERAVTNSSL*PAAHPGSKCKEPAE
Trigger: CTCAGCAGGTTCCTTGCATTTGCTGCCTGGATGTGCAGCTGGCAACAGTGATGAATTGGTCACTGCTCTTTCTCTATAACTGGGATAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR CCA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCGCTCAGATAAATAGGTaGGGCACCTGGAAGTGCAGA +
Preference number: 2 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFAQINR*GTWKCR
Trigger: TCTGCACTTCCAGGTGCCCCACCTATTTATCTGAGC...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR CCA 90 bp AGAGTAGTGGCATGGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACAGATTGTATCCGAACCTaGTCTGACGAGGTCCTGACC +
Preference number: 2 (lower is better)
Translates to: RVVAWRRHTRESFRGSSTDCIRT*SDEVLT
Trigger: GGTCAGGACCTCGTCAGACCAGGTTCGGATACAATC...TGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 90 bp GTTATTGTACATCAGCGGCTCCCTGGGCACCCTATAAATAGCACTTaGCCACATGCATTTACAGAAGGTACTCCTGCTGGCTCCATTTTA +
Preference number: 2 (lower is better)
Translates to: VIVHQRLPGHPINST*PHAFTEGTPAGSIL
Trigger: TAAAATGGAGCCAGCAGGAGTACCTTCTGTAAATGCATGTGGCAAAGTGCTATTTATAGGGTGCCCAGGGAGCCGCTGATGTACAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR TCA 90 bp CCCAAAGCAAAGTGGGAATTCAAGGACACGGGGTCAGGACACATGAACAAGACATCTCCCCATCAAGAATaGAGAAGAATCACTTGGTTG +
Preference number: 2 (lower is better)
Translates to: PKAKWEFKDTGSGHMNKTSPHQE*RRITWL
Trigger: CAACCAAGTGATTCTTCTTCATTCTTGATGGGGAGA...TGTCTTGTTCATGTGTCCTGACCCCGTGTCCTTGAATTCCCACTTTGCTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR CCA 90 bp AGAGTAGTGGCATGGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACAGTCCCAATGTCCAGGTaGCCATATGGTATTCTGCTT +
Preference number: 2 (lower is better)
Translates to: RVVAWRRHTRESFRGSSTVPMSR*PYGILL
Trigger: AAGCAGAATACCATATGGCCACCTGGACATTGGGAC...TGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR-3UTR TCA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCCAAGGACATACTTCATaGACCTCTTCATTGCAACTT +
Preference number: 2 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFQGHTS*TSSLQL
Trigger: AAGTTGCAATGAAGAGGTTCATGAAGTATGTCCTTG...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 90 bp GAGATGGTAACTGTTCCTTCTTCATGGATGCTCACAGTAGCACCTTaGGATAGCCCTGCTTTTGCTTCTTTCAGGTACAATTATTTCCTT +
Preference number: 2 (lower is better)
Translates to: EMVTVPSSWMLTVAP*DSPAFASFRYNYFL
Trigger: AAGGAAATAATTGTACCTGAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGAAGGAACAGTTACCATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp AGCACACTATTTCTGAAACCTGGCCTTGGACTTCAGTaGGCGCAGGGCAAGGAACACCACGGCCCTGGGGCC +
Preference number: 3 (lower is better)
Translates to: STLFLKPGLGLQ*AQGKEHHGPGA
Trigger: GGCCCCAGGGCCGTGGTGTTCCTTGCCCTGCGCTCACTGAAGTCCAAGGCCAGGTTTCAGAAATAGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp GCGAGGAAGGCAGCCAGCAGCATCAAGGATGTCAGCTaGGACGTGCGAGGGTTCAAGTCCAGTCACAGGCAG +
Preference number: 3 (lower is better)
Translates to: ARKAASSIKDVS*DVRGFKSSHRQ
Trigger: CTGCCTGTGACTGGACTTGAACCCTCGCACGTCTCAGCTGACATCCTTGATGCTGCTGGCTGCCTTCCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp GCGAGGGTTCAAGTCCAGTCACAGGCAGATGACAGGTaGGCCAAGGACACAACTCCTCCTTGGGCAAAGGGC +
Preference number: 3 (lower is better)
Translates to: ARVQVQSQADDR*AKDTTPPWAKG
Trigger: GCCCTTTGCCCAAGGAGGAGTTGTGTCCTTGGCTCACCTGTCATCTGCCTGTGACTGGACTTGAACCCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp GAGACGTGCGAGGGTTCAAGTCCAGTCACAGGCAGATaGCAGGTGAGCCAAGGACACAACTCCTCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: ETCEGSSPVTGR*QVSQGHNSSLG
Trigger: GCCCAAGGAGGAGTTGTGTCCTTGGCTCACCTGTCATCTGCCTGTGACTGGACTTGAACCCTCGCACGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp ATACAGATCCTTAGCCCATCTCCAACCTTGCCCCACTaGGAGAGTGCAGCAGTCAGGGGCCCATCAGAGACC +
Preference number: 3 (lower is better)
Translates to: IQILSPSPTLPH*ESAAVRGPSET
Trigger: GGTCTCTGATGGGCCCCTGACTGCTGCACTCTCTCAGTGGGGCAAGGTTGGAGATGGGCTAAGGATCTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 72 bp CCAGAGAACACACACACACACAAGTGCCCTCAGGGCTaGAGAGCCAGAAAGGCAGCCAGAGAACACCAAGGA +
Preference number: 3 (lower is better)
Translates to: PENTHTHKCPQG*RARKAAREHQG
Trigger: TCCTTGGTGTTCTCTGGCTGCCTTTCTGGCTCTGCAGCCCTGAGGGCACTTGTGTGTGTGTGTGTTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp AGAGGCCCCCGTACTTCCAGGGCCCAAGACGGGAAATaGATGAGGAAGCGGGTGGACATGACTGTCAATATC +
Preference number: 3 (lower is better)
Translates to: RGPRTSRAQDGK*MRKRVDMTVNI
Trigger: GATATTGACAGTCATGTCCACCCGCTTCCTCATCCATTTCCCGTCTTGGGCCCTGGAAGTACGGGGGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 72 bp GGAAAGAATGCTTGTCAACACCAGATGCTATATAAATaGGGCAGAAGGGCATGGGCCCGACCAGGGCCCCCA +
Preference number: 3 (lower is better)
Translates to: GKNACQHQMLYK*GRRAWARPGPP
Trigger: TGGGGGCCCTGGTCGGGCCCATGCCCTTCTGCCGCATTTATATAGCATCTGGTGTTGACAAGCATTCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 72 bp CACTTTTCTGCACCAAGGGAAGCAATCTGGCAAGGCTaGAGTTTCTGTGCAGGACTCATGGCCCCAGGACCA +
Preference number: 3 (lower is better)
Translates to: HFSAPREAIWQG*SFCAGLMAPGP
Trigger: TGGTCCTGGGGCCATGAGTCCTGCACAGAAACTGCAGCCTTGCCAGATTGCTTCCCTTGGTGCAGAAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp CAACACCAGATGCTATATAAATGCGGCAGAAGGGCATaGGCCCGACCAGGGCCCCCATTAGTCATGCTCAAC +
Preference number: 3 (lower is better)
Translates to: QHQMLYKCGRRA*ARPGPPLVMLN
Trigger: GTTGAGCATGACTAATGGGGGCCCTGGTCGGGCCCATGCCCTTCTGCCGCATTTATATAGCATCTGGTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp AGGAACAGGCAGCACACTATTTCTGAAACCTGGCCTTaGACTTCAGTGAGCGCAGGGCAAGGAACACCACGG +
Preference number: 3 (lower is better)
Translates to: RNRQHTISETWP*TSVSAGQGTPR
Trigger: CCGTGGTGTTCCTTGCCCTGCGCTCACTGAAGTCCAAGGCCAGGTTTCAGAAATAGTGTGCTGCCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 72 bp CTACTACTATACAGATCCTTAGCCCATCTCCAACCTTaGCCCACTGAGAGAGTGCAGCAGTCAGGGGCCCAT +
Preference number: 3 (lower is better)
Translates to: LLLYRSLAHLQP*PTERVQQSGAH
Trigger: ATGGGCCCCTGACTGCTGCACTCTCTCAGTGGGGCAAGGTTGGAGATGGGCTAAGGATCTGTATAGTAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 72 bp TCTATCCCTCATGTTCCGGTAGGAGAGGCCTGTCTGTaGACCCCTGGAATGGTATTCTGCTGTCCAATCCTG +
Preference number: 3 (lower is better)
Translates to: SIPHVPVGEACL*TPGMVFCCPIL
Trigger: CAGGATTGGACAGCAGAATACCATTCCAGGGGTGCACAGACAGGCCTCTCCTACCGGAACATGAGGGATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp GGCTACCTGTGCACAGGCCTTGGTCAGTTTTCAGTATaGGGGACCTCAAGGTTATTGTACATCAGCGGCTCC +
Preference number: 3 (lower is better)
Translates to: GYLCTGLGQFSV*GTSRLLYISGS
Trigger: GGAGCCGCTGATGTACAATAACCTTGAGGTCCCCCATACTGAAAACTGACCAAGGCCTGTGCACAGGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp TCATGTTCCGGTAGGAGAGGCCTGTCTGTGCACCCCTaGAATGGTATTCTGCTGTCCAATCCTGAGACACCT +
Preference number: 3 (lower is better)
Translates to: SCSGRRGLSVHP*NGILLSNPETP
Trigger: AGGTGTCTCAGGATTGGACAGCAGAATACCATTCCAGGGGTGCACAGACAGGCCTCTCCTACCGGAACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp AGTCAGGGGCCCATCAGAGACCAGGTGTGTAGGAGCTaGGAGATGGTAACTGTTCCTTCTTCATGGATGCTC +
Preference number: 3 (lower is better)
Translates to: SQGPIRDQVCRS*EMVTVPSSWML
Trigger: GAGCATCCATGAAGAAGGAACAGTTACCATCTCTCAGCTCCTACACACCTGGTCTCTGATGGGCCCCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp AAGCAGAATGGGGAATGCAGCCAACCTGTTCAGTTCTaGGCCCAGTGGCCTCACTCAGCAATTAGTCCAAGC +
Preference number: 3 (lower is better)
Translates to: KQNGECSQPVQF*AQWPHSAISPS
Trigger: GCTTGGACTAATTGCTGAGTGAGGCCACTGGGCTCAGAACTGAACAGGTTGGCTGCATTCCCCATTCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp TGTGAAGGATCTCAGGAACAGGCAGCACACTATTTCTaGAACCTGGCCTTGGACTTCAGTGAGCGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: CEGSQEQAAHYF*NLALDFSERRA
Trigger: TGCCCTGCGCTCACTGAAGTCCAAGGCCAGGTTTCAGAAATAGTGTGCTGCCTGTTCCTGAGATCCTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 72 bp AGAGGGCCATTTAGTGGAGCCAAGGATATACAGATGTaGTCATGGTTTAGCCTGAGGTTATGGAGGGCCCGG +
Preference number: 3 (lower is better)
Translates to: RGPFSGAKDIQM*SWFSLRLWRAR
Trigger: CCGGGCCCTCCATAACCTCAGGCTAAACCATGAGCACATCTGTATATCCTTGGCTCCACTAAATGGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp AGGAACCTGCTGAGTGACCTCCAAGACAAAAGACAGTaGAGCAGCATTCAGAGAGTCTTGAGGGAAGAGGGG +
Preference number: 3 (lower is better)
Translates to: RNLLSDLQDKRQ*SSIQRVLREEG
Trigger: CCCCTCTTCCCTCAAGACTCTCTGAATGCTGCTCCACTGTCTTTTGTCTTGGAGGTCACTCAGCAGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp AGAGAGGTGTGGAAAAGCTCAGCTCCTATAACCAGCTaGGCCCCAAAGCTCTTCTCTCTATCCAGCTCAAGG +
Preference number: 3 (lower is better)
Translates to: REVWKSSAPITS*APKLFSLSSSR
Trigger: CCTTGAGCTGGATAGAGAGAAGAGCTTTGGGGCCCAGCTGGTTATAGGAGCTGAGCTTTTCCACACCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp GATCTCAGGAACAGGCAGCACACTATTTCTGAAACCTaGCCTTGGACTTCAGTGAGCGCAGGGCAAGGAACA +
Preference number: 3 (lower is better)
Translates to: DLRNRQHTISET*PWTSVSAGQGT
Trigger: TGTTCCTTGCCCTGCGCTCACTGAAGTCCAAGGCCAGGTTTCAGAAATAGTGTGCTGCCTGTTCCTGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp CCAGTGAGTGAGTCCCCCAAGAAACTATTCCTGGGATaGGCAGATGATTGTATCCGAACCTGGTCTGACGAG +
Preference number: 3 (lower is better)
Translates to: PVSESPKKLFLG*ADDCIRTWSDE
Trigger: CTCGTCAGACCAGGTTCGGATACAATCATCTGCTCATCCCAGGAATAGTTTCTTGGGGGACTCACTCACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp GCACATCCAGGCAGCAAATGCAAGGAACCTGCTGAGTaGCCTCCAAGACAAAAGACAGTGGAGCAGCATTCA +
Preference number: 3 (lower is better)
Translates to: AHPGSKCKEPAE*PPRQKTVEQHS
Trigger: TGAATGCTGCTCCACTGTCTTTTGTCTTGGAGGTCACTCAGCAGGTTCCTTGCATTTGCTGCCTGGATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp GAACCAAGCAGATCAGCAACTTGCTTCCTAGCTGTGTaGCCCTGGGCAAATTACAGAGCCATCAGAGCCTTG +
Preference number: 3 (lower is better)
Translates to: EPSRSATCFLAV*PWANYRAIRAL
Trigger: CAAGGCTCTGATGGCTCTGTAATTTGCCCAGGGTCACACAGCTAGGAAGCAAGTTGCTGATCTGCTTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp CTGCTGGCTCCATTTTACTTCAAGGGCATCACAACATaGATGGCCCAGTTGAGAGTGAATTCCCAAGTCCCA +
Preference number: 3 (lower is better)
Translates to: LLAPFYFKGITT*MAQLRVNSQVP
Trigger: TGGGACTTGGGAATTCACTCTCAACTGGGCCATCCATGTTGTGATGCCCTTGAAGTAAAATGGAGCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp GCTGGCAAGGAGCTATGGTGTTTCACTGACCTTCTCTaGTACATACACCCAACTCCCTTGAGAGGAAAGCAT +
Preference number: 3 (lower is better)
Translates to: AGKELWCFTDLL*YIHPTPLRGKH
Trigger: ATGCTTTCCTCTCAAGGGAGTTGGGTGTATGTATCAGAGAAGGTCAGTGAAACACCATAGCTCCTTGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp TTTAAGTCAGGCTTTGTCTGGGTTGGTGTCCAGGTGTaGAGGATCTCAGGAACAGGCAGCACACTATTTCTG +
Preference number: 3 (lower is better)
Translates to: FKSGFVWVGVQV*RISGTGSTLFL
Trigger: CAGAAATAGTGTGCTGCCTGTTCCTGAGATCCTTCACACCTGGACACCAACCCAGACAAAGCCTGACTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp CTTGGGCAAAGGGCAATCTCAAAACCTCGGTGGACCTaGGCTAGGCCAACTTTATCTCAAGAGCTTCTAAGT +
Preference number: 3 (lower is better)
Translates to: LGQRAISKPRWT*ARPTLSQELLS
Trigger: ACTTAGAAGCTCTTGAGATAAAGTTGGCCTAGCTCAGGTCCACCGAGGTTTTGAGATTGCCCTTTGCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp CCACACTCTCAACTTCAGCGATTCATCCTGTATAGATaGAAGAAGCTTCCTCTAGGAGCTGGCAAGGAGCTA +
Preference number: 3 (lower is better)
Translates to: PHSQLQRFILYR*KKLPLGAGKEL
Trigger: TAGCTCCTTGCCAGCTCCTAGAGGAAGCTTCTTTCATCTATACAGGATGAATCGCTGAAGTTGAGAGTGTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 72 bp AGTTGTCCAGATGTAAGATATCATTGTTGCTATTACTaGTACCACCAGACCCTAGGGATGCCACAGGATGCC +
Preference number: 3 (lower is better)
Translates to: SCPDVRYHCCYY*YHQTLGMPQDA
Trigger: GGCATCCTGTGGCATCCCTAGGGTCTGGTGGTAGCAGTAATAGCAACAATGATATCTTACATCTGGACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp CAGTTGAGAGTGAATTCCCAAGTCCCAATGTCCAGGTaGCCATATGGTATTCTGCTTCATAGCTGTTCTAGG +
Preference number: 3 (lower is better)
Translates to: QLRVNSQVPMSR*PYGILLHSCSR
Trigger: CCTAGAACAGCTATGAAGCAGAATACCATATGGCCACCTGGACATTGGGACTTGGGAATTCACTCTCAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp TTCACACATAACACAGGAGGCCTCAGAGTAGTGGCATaGAGAAGACATACACGAGAAAGCTTTAGAGGAAGC +
Preference number: 3 (lower is better)
Translates to: FTHNTGGLRVVA*RRHTRESFRGS
Trigger: GCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCTGAGGCCTCCTGTGTTATGTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 72 bp TCTGTTCCTATTACCATCTTCCATGAAGTTAGCACCTaGCAAGAGCAGAAGGAACGTGTCTTTGTGCAAAGG +
Preference number: 3 (lower is better)
Translates to: SVPITIFHEVST*QEQKERVFVQR
Trigger: CCTTTGCACAAAGACACGTTCCTTCTGCTCTTGGCAGGTGCTAACTTCATGGAAGATGGTAATAGGAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 72 bp TTCACAGCCATCCAGTCTTCAGTGCCCTCTGCTCTTTaGTTTGTTAAAAGTGAGCTGGATGAGTTAGGATTG +
Preference number: 3 (lower is better)
Translates to: FTAIQSSVPSAL*FVKSELDELGL
Trigger: CAATCCTAACTCATCCAGCTCACTTTTAACAAAGCAAAGAGCAGAGGGCACTGAAGACTGGATGGCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 72 bp ACGTATATTTCACACACACACACACACACACTTTTCTaGACCAAGGGAAGCAATCTGGCAAGGCTGCAGTTT +
Preference number: 3 (lower is better)
Translates to: TYISHTHTHTLF*TKGSNLARLQF
Trigger: AAACTGCAGCCTTGCCAGATTGCTTCCCTTGGTGCAGAAAAGTGTGTGTGTGTGTGTGTGTGAAATATACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp TGGACAAGTAAGGATGGCACTCAACCTCTCACTCAATaGCAGGTGACCATCATTCAGTTACACTACATCAGT +
Preference number: 3 (lower is better)
Translates to: WTSKDGTQPLTQ*QVTIIQLHYIS
Trigger: ACTGATGTAGTGTAACTGAATGATGGTCACCTGCCATTGAGTGAGAGGTTGAGTGCCATCCTTACTTGTCCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp GTAAGGATGGCACTCAACCTCTCACTCAATGGCAGGTaGCCATCATTCAGTTACACTACATCAGTTACACTA +
Preference number: 3 (lower is better)
Translates to: VRMALNLSLNGR*PSFSYTTSVTL
Trigger: TAGTGTAACTGATGTAGTGTAACTGAATGATGGTCACCTGCCATTGAGTGAGAGGTTGAGTGCCATCCTTAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp GGTATTCTGCTTCATAGCTGTTCTAGGGCATTGCGGTaGTATCTACTAACCAAACATAACCAAAAGCCCACA +
Preference number: 3 (lower is better)
Translates to: GILLHSCSRALR*YLLTKHNQKPT
Trigger: TGTGGGCTTTTGGTTATGTTTGGTTAGTAGATATCACCGCAATGCCCTAGAACAGCTATGAAGCAGAATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp GGGAGTGAAAAAGCCTCCGTTCACTTTAGTCCCTTCTaGAATCTGGACGAGAGAATGAATGAAGTTCATTCA +
Preference number: 3 (lower is better)
Translates to: GSEKASVHFSPF*NLDERMNEVHS
Trigger: TGAATGAACTTCATTCATTCTCTCGTCCAGATTTCAGAAGGGACTAAAGTGAACGGAGGCTTTTTCACTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 72 bp ACTATTCTGAGTTGTCCAGATGTAAGATATCATTGTTaGTATTACTGCTACCACCAGACCCTAGGGATGCCA +
Preference number: 3 (lower is better)
Translates to: TILSCPDVRYHC*YYCYHQTLGMP
Trigger: TGGCATCCCTAGGGTCTGGTGGTAGCAGTAATAGCAACAATGATATCTTACATCTGGACAACTCAGAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR GCA 72 bp GAAAAGAAAGTGAGCAAGTTCATCACCTCCCTTCTTTaGTACAACTGTGTATCAAAGGCATGTGGCTCAATG +
Preference number: 3 (lower is better)
Translates to: EKKVSKFITSLL*YNCVSKACGSM
Trigger: CATTGAGCCACATGCCTTTGATACACAGTTGTAGCAAAGAAGGGAGGTGATGAACTTGCTCACTTTCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR TCA 72 bp AGAACAAACTTTGTATGTACTTCTCCCCATCAAGAATaGAGAAGAATCACTTGGTTGGCTGGAACTGCTGGT +
Preference number: 3 (lower is better)
Translates to: RTNFVCTSPHQE*RRITWLAGTAG
Trigger: ACCAGCAGTTCCAGCCAACCAAGTGATTCTTCTTCATTCTTGATGGGGAGAAGTACATACAAAGTTTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CCA 72 bp AGTTACACTACATCAGTTACACTACATCTAGAAAGATaGCTGCAACCTACCACAATGGCAAAAGTTAAAAAT +
Preference number: 3 (lower is better)
Translates to: SYTTSVTLHLER*LQPTTMAKVKN
Trigger: ATTTTTAACTTTTGCCATTGTGGTAGGTTGCAGCCATCTTTCTAGATGTAGTGTAACTGATGTAGTGTAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGGAAGGAGTCCGCCGGTaGCTGCTGGGCTGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPEGVRR*LLGCEG
Trigger: CCCCTCGCAGCCCAGCAGTCACCGGCGGACTCCTTC...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGGGGCACCGCCCCGCTTaGGGCTGTTGGTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPGHRPA*GCWLAS
Trigger: TGACGCCAACCAACAGCCTCAAGCGGGGCGGTGCCC...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCTCCTCCCGGGCTGGTaGCTCAGGCTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCLLPGW*LRLLQG
Trigger: CCCCTGGAGGAGCCTGAGCCACCAGCCCGGGAGGAG...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGCCAGCCGTTGCCGGTTaGCAGAAGGACGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPPAVAG*QKDAAE
Trigger: CTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGG...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCGAAGGAGTCCGCCGGTaGCTGCTGGGCTGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGEGVRR*LLGCEG
Trigger: CCCCTCGCAGCCCAGCAGTCACCGGCGGACTCCTTC...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCGAGTCCGCCGGTGACTaGTGGGCTGCGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGESAGD*WAARGW
Trigger: CCACCCCCTCGCAGCCCAGCAGTCACCGGCGGACTC...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGGGAGGGTGGGGGACATaGATGCACCCCTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPGGWGT*MHPFLP
Trigger: GGGGAGGAAGGGGTGCATGCATGTCCCCCACCCTCC...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTTCGCAGCGGCGGTGGTaGGCACCGCCCCGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPASQRRW*APPRLR
Trigger: CCTCAAGCGGGGCGGTGCCCACCACCGCCGCTGCGA...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTGGCAGCGGCCCTGCCTaGAACGGGAGCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPGSGPA*NGSRAG
Trigger: TCCAGCCCTGCTCCCGTTCCAGGCAGGGCCGCTGCC...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGTTGGTTGGCGTCAGCTaGGGGGTACTCGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPLVGVS*GVLVAE
Trigger: CTCGGCCACGAGTACCCCTCAGCTGACGCCAACCAA...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCAGGGGGTCCAACCCTaGGAAAGGGCTGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPQGVQP*ERAVPA
Trigger: GGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTG...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCGGCTGGAGAAGGCGCTaGGCGGGGTCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCGWRRR*AGSRSC
Trigger: GCAACTACGTGACCCCGCGCAGCGCCTTCTCCAGCC...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGCAAGGGTCCAGCCGTTaGCGGTTGGCAGAAGGACGC +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPQGSSR*RLAEGR
Trigger: GCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTG...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCTGTTGGCTGGGGAGGTaGTGCGGGCATGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGCWLGR*CGHGWG
Trigger: CCCCCAGCCATGCCCGCAGCACCTCCCCAGCCAACA...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGTGCTGGGCGTCTCTGTaGTGGAGCTGTTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPCWASL*WSCWLG
Trigger: CCCCAGCCAACAGCTCCAGCACAGAGACGCCCAGCA...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGCTCCTCCCGGGCTGGTaGCTCAGGCTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQLLPGW*LRLLQG
Trigger: CCCCTGGAGGAGCCTGAGCCACCAGCCCGGGAGGAG...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCCCAGCCGTTGCCGGTTaGCAGAAGGACGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGPAVAG*QKDAAE
Trigger: CTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGG...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGGGGCCTCGACTGGGCTaGCTGGCATCTCATACACGA +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPGPRLG*LASHTR
Trigger: TCGTGTATGAGATGCCAGTCAGCCCAGTCGAGGCCC...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTGGCACGGTGCTGTCCTaGCTCTGCCCCTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPGTVLS*LCPSAS
Trigger: GGATGCAGAGGGGCAGAGTCAGGACAGCACCGTGCC...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGCAGGGGGTCCAACCCTaGGAAAGGGCTGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQQGVQP*ERAVPA
Trigger: GGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTG...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTGGCTGGAGAAGGCGCTaGGCGGGGTCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPGWRRR*AGSRSC
Trigger: GCAACTACGTGACCCCGCGCAGCGCCTTCTCCAGCC...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGTGCTGGAGGGGCTCCTaGTGGCTAGGAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPCWRGS*WLGESL
Trigger: CAGAGACTCTCCTAGCCAGCAGGAGCCCCTCCAGCA...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCAAGGGTCCAGCCGTTaGCGGTTGGCAGAAGGACGC +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCQGSSR*RLAEGR
Trigger: GCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTG...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGCTGACTCTGCCCCTCTaGATCCAGGTCCAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPLTLPL*IQVQER
Trigger: ACGCTCCTGGACCTGGATGCAGAGGGGCAGAGTCAG...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCGGGTAGAAAGGCCCTaGAGGGCAGGAGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCRVERP*RAGDPL
Trigger: CAGAGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCG...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTGGAGGGTGGGGGACATaGATGCACCCCTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPGGWGT*MHPFLP
Trigger: GGGGAGGAAGGGGTGCATGCATGTCCCCCACCCTCC...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCTGACCAAGCGTCCCTaGCCCCCACGTCCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPLTKRP*PPRPSL
Trigger: AAGGGACGGACGTGGGGGCCAGGGACGCTTGGTCAG...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCGGCCGGGCTACTCCTTaGGCCCTTCACCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGGRATP*ALHQVG
Trigger: CCCAACCTGGTGAAGGGCCCAAGGAGTAGCCCGGCC...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCTTCTCCTCCCGGGCTaGTGGCTCAGGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPLLLPG*WLRLLQ
Trigger: CTGGAGGAGCCTGAGCCACCAGCCCGGGAGGAGAAG...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCGGGGGAAGACCACATTaGGGTCAGGGAGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCGGRPH*GQGDGG
Trigger: TCCCCCGTCTCCCTGACCCCAATGTGGTCTTCCCCC...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGTGCTGCGGGCATGGCTaGGGGACACAAACCACCAAG +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPCCGHG*GTQTTK
Trigger: CTTGGTGGTTTGTGTCCCCCAGCCATGCCCGCAGCA...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGAGGAGTCCAGGTTGCTaGGCGTCTCTGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPRSPGC*ASLCWS
Trigger: GCTCCAGCACAGAGACGCCCAGCAACCTGGACTCCT...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGGCAGCGGCCCTGCCTaGAACGGGAGCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPGSGPA*NGSRAG
Trigger: TCCAGCCCTGCTCCCGTTCCAGGCAGGGCCGCTGCC...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCAGGCAGCGGCCCTGCCTaGAACGGGAGCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPGSGPA*NGSRAG
Trigger: TCCAGCCCTGCTCCCGTTCCAGGCAGGGCCGCTGCC...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTGAGGCAAGCTCCTTCTaGCCAAGCGTCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAEASSF*PSVPGP
Trigger: GGGGCCAGGGACGCTTGGTCAGAAGGAGCTTGCCTC...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCTACTCGTGGCCGAGTTaGCTGGGGTGGGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCYSWPS*LGWAPH
Trigger: ATGAGGAGCCCACCCCAGTCAACTCGGCCACGAGTA...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTTTGGTTGGCGTCAGCTaGGGGGTACTCGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPLVGVS*GVLVAE
Trigger: CTCGGCCACGAGTACCCCTCAGCTGACGCCAACCAA...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGGGCACCGCCCCGCTTaGGGCTGTTGGTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPGHRPA*GCWLAS
Trigger: TGACGCCAACCAACAGCCTCAAGCGGGGCGGTGCCC...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCTACACAGCCAGAGCTaGTGGCCACAGCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPLHSQS*WPQPLQ
Trigger: CTGGAGGGGCTGTGGCCATCAGCTCTGGCTGTGTAG...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTGCACACCCAACTGGCTaGGGAGAGGGAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPAHPTG*GEGAAD
Trigger: GTCTGCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGC...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCAACCTTGCCCCACTaGGAGAGTGCAGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCPTLPH*ESAAVR
Trigger: CCTGACTGCTGCACTCTCTCAGTGGGGCAAGGTTGG...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGATCTTGGTGGTTCGGTaGCATTCCCGAGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPILVVR*HSRARP
Trigger: TGGCCTGGCTCGGGAATGGCACCGAACCACCAAGAT...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGCCGGATGACTTCGGGTaGCATCCAAGCATACGTCCC +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPPDDFG*HPSIRP
Trigger: GGGACGTATGCTTGGATGGCACCCGAAGTCATCCGG...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCATGTTGGCTGGGGAGGTaGTGCGGGCATGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPCWLGR*CGHGWG
Trigger: CCCCCAGCCATGCCCGCAGCACCTCCCCAGCCAACA...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTTGCTGGGCGTCTCTGTaGTGGAGCTGTTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPCWASL*WSCWLG
Trigger: CCCCAGCCAACAGCTCCAGCACAGAGACGCCCAGCA...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCTGCACAGCGGCACGGTaGTGTCCTGACTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGCTAAR*CPDSAP
Trigger: AGGGGCAGAGTCAGGACAGCACCGTGCCGCTGTGCA...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCCCTGAGAAAGGGCTGTaGCCGCCAGCTCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGPEKGL*PPAPLI
Trigger: GATGAGGGGAGCTGGCGGGCACAGCCCTTTCTCAGG...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGCACAGCTCCAGGGCCTaGTCCCGACCAGGACCACAG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQHSSRA*SRPGPQ
Trigger: CTGTGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTG...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTAAGATGCCCACCCGCTaGTTCAGCTGCCCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPKMPTR*FSCPVH
Trigger: GTGGACCGGGCAGCTGAACCAGCGGGTGGGCATCTT...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGCTGACCAAGCGTCCCTaGCCCCCACGTCCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQLTKRP*PPRPSL
Trigger: AAGGGACGGACGTGGGGGCCAGGGACGCTTGGTCAG...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCCGGGCTACTCCTTaGGCCCTTCACCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQGRATP*ALHQVG
Trigger: CCCAACCTGGTGAAGGGCCCAAGGAGTAGCCCGGCC...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGACCTCGCAGCGGCGGTaGTGGGCACCGCCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLTSQRR*WAPPRL
Trigger: CAAGCGGGGCGGTGCCCACCACCGCCGCTGCGAGGT...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCGAAAAGCTTTCGGGATaGGGGGCTGGTGCTCCGACG +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCEKLSG*GAGAPT
Trigger: CGTCGGAGCACCAGCCCCCCATCCCGAAAGCTTTTC...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCGGGAGGGGCCTCGACTaGGCTGACTGGCATCTCATA +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCGRGLD*ADWHLI
Trigger: TATGAGATGCCAGTCAGCCCAGTCGAGGCCCCTCCC...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCTGGAGGGGCTCCTGCTaGCTAGGAGAGTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCWRGSC*LGESLA
Trigger: AGCCAGAGACTCTCCTAGCCAGCAGGAGCCCCTCCA...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGCACCTGGGTCTCGGCTaGGACTGGGGGTTTTCAACA +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPHLGLG*DWGFST
Trigger: TGTTGAAAACCCCCAGTCCCAGCCGAGACCCAGGTG...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCGAGGTGCTGCGGGCATaGCTGGGGGACACAAACCAC +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGEVLRA*LGDTNH
Trigger: GTGGTTTGTGTCCCCCAGCCATGCCCGCAGCACCTC...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGAACGGGAGCAGGGCTaGAAGTCCAGGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQEREQG*KSRPLL
Trigger: GAGGAGCGGCCTGGACTTCCAGCCCTGCTCCCGTTC...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCTGGGCACCACCCAACTaGCTGCCAGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCWAPPN*LPARPS
Trigger: AGATGGCCTTGCTGGCAGCCAGTTGGGTGGTGCCCA...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554146.1
ENST00000555993.6
CDS-3UTR TCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCTGCGGTTGCCATCCTTaGGCTTCAGCCGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGCGCHP*ASAGSS
Trigger: GGAAGAGCCGGCTGAAGCTCAAGGATGGCAACCGCA...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTTACTCGTGGCCGAGTTaGCTGGGGTGGGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPYSWPS*LGWAPH
Trigger: ATGAGGAGCCCACCCCAGTCAACTCGGCCACGAGTA...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TACAGAGGCCCCCGTACTTCCAGGGCCCAAGACGGGAAATGGATGAGGAAGCGGGGGCACCGCCCCGCTTaGGGCTGTTGGTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: YRGPRTSRAQDGKWMRKRGHRPA*GCWLAS
Trigger: TGACGCCAACCAACAGCCTCAAGCGGGGCGGTGCCC...CCGCTTCCTCATCCATTTCCCGTCTTGGGCCCTGGAAGTACGGGGGCCTCTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGGCACGGTGCTGTCCTaGCTCTGCCCCTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPGTVLS*LCPSAS
Trigger: GGATGCAGAGGGGCAGAGTCAGGACAGCACCGTGCC...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCTACACAGCCAGAGCTaGTGGCCACAGCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPALHSQS*WPQPLQ
Trigger: CTGGAGGGGCTGTGGCCATCAGCTCTGGCTGTGTAG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGCGGCCTCGTCACCTCTaGCGCCGGTACCTGCTCGCG +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLRPRHL*RRYLLA
Trigger: CGCGAGCAGGTACCGGCGGCAGAGGTGACGAGGCCG...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCGCCGCCTATTGTTCATaGGCCTCCGCAGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGAAYCS*ASAELG
Trigger: TCCCAGCTCTGCGGAGGCGCATGAACAATAGGCGGC...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTTCGTCGCCGGACACCTaGGAGTCCTTGGACAGCACC +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPASSPDT*ESLDST
Trigger: GGTGCTGTCCAAGGACTCGCAGGTGTCCGGCGACGA...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTTGCTGGAGGGGCTCCTaGTGGCTAGGAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPCWRGS*WLGESL
Trigger: CAGAGACTCTCCTAGCCAGCAGGAGCCCCTCCAGCA...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCAAGGGTCCAGCCGTTaGCGGTTGGCAGAAGGACGC +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAQGSSR*RLAEGR
Trigger: GCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCAGGAGGGTGGGGGACATaGATGCACCCCTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPGGWGT*MHPFLP
Trigger: GGGGAGGAAGGGGTGCATGCATGTCCCCCACCCTCC...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGCTCTGGAGGGCTCCATaGAGCGGCCGATCCATAGGG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQLWRAP*SGRSIG
Trigger: CCCTATGGATCGGCCGCTCCATGGAGCCCTCCAGAG...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCCGTGGCCGAGTTGACTaGGGTGGGCTCCTCATGGAT +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGRGRVD*GGLLMD
Trigger: ATCCATGAGGAGCCCACCCCAGTCAACTCGGCCACG...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACACCTCGCAGCGGCGGTaGTGGGCACCGCCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDTSQRR*WAPPRL
Trigger: CAAGCGGGGCGGTGCCCACCACCGCCGCTGCGAGGT...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTGGGGGAAGACCACATTaGGGTCAGGGAGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAGGRPH*GQGDGG
Trigger: TCCCCCGTCTCCCTGACCCCAATGTGGTCTTCCCCC...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TACAGAGGCCCCCGTACTTCCAGGGCCCAAGACGGGAAATGGATGAGGAAGCGGTCCCCTCATCTCCGCTaGCTGTCCCCCTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: YRGPRTSRAQDGKWMRKRSPHLR*LSPLPA
Trigger: GGCGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGA...CCGCTTCCTCATCCATTTCCCGTCTTGGGCCCTGGAAGTACGGGGGCCTCTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGGGAGACCCTCTGAAGTaGCCCTGTTTCCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPGDPLK*PCFHPF
Trigger: GAAGGGATGGAAACAGGGCCACTTCAGAGGGTCTCC...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCACGAGCAAACTCCATaGCCAAGCAGAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCHEQTP*PSRGWA
Trigger: AGCCCAACCTCTGCTTGGTCATGGAGTTTGCTCGTG...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGGGTCCAGGATATTCGTaGAAGATGGTCGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPGPGYS*KMVVSG
Trigger: CCCACTCACGACCATCTTTCACGAATATCCTGGACC...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TACAGAGGCCCCCGTACTTCCAGGGCCCAAGACGGGAAATGGATGAGGAAGCGGGAGGCAAGCTCCTTCTaGCCAAGCGTCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: YRGPRTSRAQDGKWMRKREASSF*PSVPGP
Trigger: GGGGCCAGGGACGCTTGGTCAGAAGGAGCTTGCCTC...CCGCTTCCTCATCCATTTCCCGTCTTGGGCCCTGGAAGTACGGGGGCCTCTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTGGACGGCTGGACCTCTaGAAAAGACCCTCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPGRLDL*KRPSRL
Trigger: AAGACGGGAGGGTCTTTTTCAGAGGTCCAGCCGTCC...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACGAAGGAGTCCGCCGGTaGCTGCTGGGCTGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDEGVRR*LLGCEG
Trigger: CCCCTCGCAGCCCAGCAGTCACCGGCGGACTCCTTC...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCAGGGGGTCCAACCCTaGGAAAGGGCTGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCQGVQP*ERAVPA
Trigger: GGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTG...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCGTTGGTGTCCAGGTGTaGAGGATCTCAGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCVGVQV*RISGTG
Trigger: GCCTGTTCCTGAGATCCTTCACACCTGGACACCAAC...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACTCTGCCGCCGGTACCTaGTCGCGCAGCCGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDSAAGT*SRSRCP
Trigger: CGGGCACCGGCTGCGCGAGCAGGTACCGGCGGCAGA...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCGGGGTCACGTAGTTaGTGGGGAAGATGCCCACCC +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPAGSRS*WGRCPP
Trigger: GGGTGGGCATCTTCCCCAGCAACTACGTGACCCCGC...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCCGGATGACTTCGGGTaGCATCCAAGCATACGTCCC +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPPDDFG*HPSIRP
Trigger: GGGACGTATGCTTGGATGGCACCCGAAGTCATCCGG...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGGAAGCAGCTGGCACTTaGCAGCTTCCAGCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPEAAGT*QLPASQ
Trigger: TTGACTTGCTGGAAGCTGGCAAGTGCCAGCTGCTTC...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCGGGAGCGTGTGGAGTTaGACTCGGAGATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGGSVWS*TRRWRR
Trigger: TCTCCTCCATCTCCGAGTGCAACTCCACACGCTCCC...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCATGCACAGCGGCACGGTaGTGTCCTGACTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPCTAAR*CPDSAP
Trigger: AGGGGCAGAGTCAGGACAGCACCGTGCCGCTGTGCA...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCACTCTGGAGGGCTCCATaGAGCGGCCGATCCATAGGG +
Preference number: 4 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPLWRAP*SGRSIG
Trigger: CCCTATGGATCGGCCGCTCCATGGAGCCCTCCAGAG...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAAAGATGCCCACCCGCTaGTTCAGCTGCCCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPKMPTR*FSCPVH
Trigger: GTGGACCGGGCAGCTGAACCAGCGGGTGGGCATCTT...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCCCGCACTCATCTTGGTaGTTCGGTGCCATTCCCGAG +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGPHSSW*FGAIPE
Trigger: CTCGGGAATGGCACCGAACCACCAAGATGAGTGCGG...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCCGCACTCATCTTGGTaGTTCGGTGCCATTCCCGAG +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPPHSSW*FGAIPE
Trigger: CTCGGGAATGGCACCGAACCACCAAGATGAGTGCGG...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCTTGAGGCTGTTGGTTaGCGTCAGCTGAGGGGTACT +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCLEAVG*RQLRGT
Trigger: AGTACCCCTCAGCTGACGCCAACCAACAGCCTCAAG...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACACCTCGCAGCGGCGGTaGTGGGCACCGCCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDTSQRR*WAPPRL
Trigger: CAAGCGGGGCGGTGCCCACCACCGCCGCTGCGAGGT...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCACCTGGGTCTCGGCTaGGACTGGGGGTTTTCAACA +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPHLGLG*DWGFST
Trigger: TGTTGAAAACCCCCAGTCCCAGCCGAGACCCAGGTG...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTTGCTGCGGGCATGGCTaGGGGACACAAACCACCAAG +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPACCGHG*GTQTTK
Trigger: CTTGGTGGTTTGTGTCCCCCAGCCATGCCCGCAGCA...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCTCCCCTCATCTCCGCTaGCTGTCCCCCTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCSPHLR*LSPLPA
Trigger: GGCGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGA...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCTCCTGGCAGCAGTCTaGATCCCCAAGAGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCLLAAV*IPKRVK
Trigger: TTTGACCCTCTTGGGGATCCAGACTGCTGCCAGGAG...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTGCTCCCCGTAGGGGATaGGGAACCACAGACAGTAAG +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPAPRRG*GTTDSK
Trigger: CTTACTGTCTGTGGTTCCCCATCCCCTACGGGGAGC...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCGAGGCAAGCTCCTTCTaGCCAAGCGTCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCEASSF*PSVPGP
Trigger: GGGGCCAGGGACGCTTGGTCAGAAGGAGCTTGCCTC...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGGTCTTCCTGCTAGCATaGAAGGGCTTAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPVFLLA*KGLGHR
Trigger: TCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGAC...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGTATCCGAACCTGGTCTaGCGAGGTCCTGACCCCAAG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQYPNLV*RGPDPK
Trigger: CTTGGGGTCAGGACCTCGTCAGACCAGGTTCGGATA...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCTGGGATGAGCAGATaGTTGTATCCGAACCTGGTC +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCPGMSR*LYPNLV
Trigger: GACCAGGTTCGGATACAATCATCTGCTCATCCCAGG...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCCAGGCAGATGACAGGTaGGCCAAGGACACAACTCCT +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGQADDR*AKDTTP
Trigger: AGGAGTTGTGTCCTTGGCTCACCTGTCATCTGCCTG...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGTCTGCCGCCGGTACCTaGTCGCGCAGCCGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPESAAGT*SRSRCP
Trigger: CGGGCACCGGCTGCGCGAGCAGGTACCGGCGGCAGA...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCATCCCTCTGGCAATCTaGACAGCCCAATTCACCAGG +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCIPLAI*TAQFTR
Trigger: CCTGGTGAATTGGGCTGTGCAGATTGCCAGAGGGAT...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTATCTTGGTGGTTCGGTaGCATTCCCGAGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAILVVR*HSRARP
Trigger: TGGCCTGGCTCGGGAATGGCACCGAACCACCAAGAT...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGTGCACCGTGAACTTGTaGTGGAAATCAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPCTVNL*WKSEGR
Trigger: CCTCCCTTCTGATTTCCAGCACAAGTTCACGGTGCA...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCTCCTGCCCCAGGTTTTaGTGCTTTCACCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCSCPRF*CFHLVS
Trigger: TGACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGA...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCACCACCCAACTGGCTaGCAGCAAGGCCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAHHPTG*QQGHLH
Trigger: ATGGAGATGGCCTTGCTGGCAGCCAGTTGGGTGGTG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554146.1
ENST00000555993.6
CDS-3UTR GCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTAGGCTGCAGTTTCTGTaGAGGACTCATGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPARLQFL*RTHGPR
Trigger: CCTGGGGCCATGAGTCCTGCACAGAAACTGCAGCCT...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTACACCTGCGAGTCCTTaGACAGCACCTCCACCACGT +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPATPASP*TAPPPR
Trigger: ACGTGGTGGAGGTGCTGTCCAAGGACTCGCAGGTGT...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTTCCTCATCAGGGTCGTaGCGAGCTGCTTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPSSSGS*RAAFTA
Trigger: TGCTGTGAAAGCAGCTCGCCACGACCCTGATGAGGA...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCTGACCAAGCGTCCCTaGCCCCCACGTCCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCLTKRP*PPRPSL
Trigger: AAGGGACGGACGTGGGGGCCAGGGACGCTTGGTCAG...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGCTGACCAAGCGTCCCTaGCCCCCACGTCCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLLTKRP*PPRPSL
Trigger: AAGGGACGGACGTGGGGGCCAGGGACGCTTGGTCAG...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTTCCGACGAGGACGGCTaGACCTCTGAAAAAGACCCT +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPSDEDG*TSEKDP
Trigger: AGGGTCTTTTTCAGAGGTCCAGCCGTCCTCGTCGGA...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGAGTTGCACTCGGAGATaGAGGAGAGGGAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQSCTRR*RRGRAA
Trigger: CGCTGCTCTCCCTCTCCTCCATCTCCGAGTGCAACT...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGGCTCAGATAAATAGGTaGGGCACCTGGAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPAQINR*GTWKCR
Trigger: TCTGCACTTCCAGGTGCCCCACCTATTTATCTGAGC...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCGCTCCTATAACCAGCTaGGCCCCAAAGCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCAPITS*APKLFS
Trigger: AGAGAAGAGCTTTGGGGCCCAGCTGGTTATAGGAGC...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTTCTCTATGGTCTGGCTaGTGTCCTCATCAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPSLWSG*CPHQGR
Trigger: ACGACCCTGATGAGGACATCAGCCAGACCATAGAGA...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGTCAGCCGGCTCTTCCTaGACTTGCCCTTGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQSAGSS*TCPCVS
Trigger: AGAAACGCAAGGGCAAGTTCAGGAAGAGCCGGCTGA...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAAAGGTAGAGTCCTGCTaGGTGTTCCAGCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPKVESC*VFQRLG
Trigger: CCCAAGGCGCTGGAACACTCAGCAGGACTCTACCTT...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGAGGGTCGTGGCGAGCTaGTTTCACAGCAACCTCATC +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQRVVAS*FHSNLI
Trigger: GATGAGGTTGCTGTGAAAGCAGCTCGCCACGACCCT...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGCCAAGCATACGTCCCTaGCGCACTCATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQPSIRP*RTHLGG
Trigger: ACCACCAAGATGAGTGCGGCAGGGACGTATGCTTGG...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCCAAGCATACGTCCCTaGCGCACTCATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAPSIRP*RTHLGG
Trigger: ACCACCAAGATGAGTGCGGCAGGGACGTATGCTTGG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCTGCACCGTGAACTTGTaGTGGAAATCAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCCTVNL*WKSEGR
Trigger: CCTCCCTTCTGATTTCCAGCACAAGTTCACGGTGCA...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAATGGTAGGGGAGGCCTaGACCGTGAACTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPMVGEA*TVNLCW
Trigger: CCAGCACAAGTTCACGGTGCAGGCCTCCCCTACCAT...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGCAAGGGTCCAGCCGTTaGCGGTTGGCAGAAGGACGC +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLQGSSR*RLAEGR
Trigger: GCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTG...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCATGTTCAGTTCCGCTCTaGACAGCGGCACGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPCSVPL*TAARCC
Trigger: ACAGCACCGTGCCGCTGTGCAGAGCGGAACTGAACA...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCGGGTAGAAAGGCCCTaGAGGGCAGGAGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCRVERP*RAGDPL
Trigger: CAGAGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCG...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCACACCACCCAACTGGCTaGCAGCAAGGCCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPHHPTG*QQGHLH
Trigger: ATGGAGATGGCCTTGCTGGCAGCCAGTTGGGTGGTG...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554146.1
ENST00000555993.6
CDS-3UTR CCA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCAACACCTGCGAGTCCTTaGACAGCACCTCCACCACGT +
Preference number: 4 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPTPASP*TAPPPR
Trigger: ACGTGGTGGAGGTGCTGTCCAAGGACTCGCAGGTGT...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTGGGCGGGTAGCAACTaGGGTCCTCGCCGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPWAGSN*GPRRRA
Trigger: AGCCCGGCGGCGAGGACCCCAGTTGCTACCCGCCCA...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCGGGCGAGTTTGTTCATaGCCACTCCATAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGGRVCS*PLHKRL
Trigger: CAGTCGCTTATGGAGTGGCCATGAACAAACTCGCCC...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGTCACCTGGTGTCAACTaGATGGCTCGAAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQSPGVN*MARRRG
Trigger: TCCTCGCCTTCGAGCCATCCAGTTGACACCAGGTGA...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACGGCCGGGCTACTCCTTaGGCCCTTCACCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDGRATP*ALHQVG
Trigger: CCCAACCTGGTGAAGGGCCCAAGGAGTAGCCCGGCC...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTACTCTCTCCACTCCCTaGGCCTTCACTGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPATLSTP*AFTVLI
Trigger: GATGAGGACAGTGAAGGCCCAGGGAGTGGAGAGAGT...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCATGGATTCCATCACTaGAGGGGCCATCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAHGFHH*RGHRHP
Trigger: AGGATGGCGATGGCCCCTCCAGTGATGGAATCCATG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGCTTGAGGCTGTTGGTTaGCGTCAGCTGAGGGGTACT +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQLEAVG*RQLRGT
Trigger: AGTACCCCTCAGCTGACGCCAACCAACAGCCTCAAG...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCTTGAGGCTGTTGGTTaGCGTCAGCTGAGGGGTACT +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPALEAVG*RQLRGT
Trigger: AGTACCCCTCAGCTGACGCCAACCAACAGCCTCAAG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGATCGCAGCGGCGGTGGTaGGCACCGCCCCGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGSQRRW*APPRLR
Trigger: CCTCAAGCGGGGCGGTGCCCACCACCGCCGCTGCGA...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGCTCCTCCCGGGCTGGTaGCTCAGGCTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPELLPGW*LRLLQG
Trigger: CCCCTGGAGGAGCCTGAGCCACCAGCCCGGGAGGAG...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGTTGACCAGGGGGTTGTaGGTACATGGACTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQLTRGL*VHGLRG
Trigger: TCCCCTGAGTCCATGTACCCACAACCCCCTGGTCAA...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCATTCCTGCTCCAGGACTaGGGCTCAACCCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPFLLQD*GSTHCW
Trigger: CCAGCAATGGGTTGAGCCCCAGTCCTGGAGCAGGAA...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGGGGGGAAGACCACATTaGGGTCAGGGAGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLGGRPH*GQGDGG
Trigger: TCCCCCGTCTCCCTGACCCCAATGTGGTCTTCCCCC...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCAGCGCCTTGGGGTTaGGGGGAAGACCACATTGGG +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCPAPWG*GEDHIG
Trigger: CCCAATGTGGTCTTCCCCCCAACCCCAAGGCGCTGG...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAAGAACGGGAGCAGGGCTaGAAGTCCAGGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQEREQG*KSRPLL
Trigger: GAGGAGCGGCCTGGACTTCCAGCCCTGCTCCCGTTC...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGCCACAGCCCCTCCAGTaGACACGGGTAGAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLPQPLQ*TRVERP
Trigger: GGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTAGGCAAGGAAGACTGTaGAGGGTGGGGGACATGCAT +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPARQGRL*RVGDMH
Trigger: ATGCATGTCCCCCACCCTCCACAGTCTTCCTTGCCT...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCGGACCAGTCGGTGGCTaGACAGAGCAGGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCGPVGG*TEQGTG
Trigger: ACCTGTCCCCTGCTCTGTCCAGCCACCGACTGGTCC...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGCCTATGACCCCACACTaGGCCACCTTGCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQPMTPH*ATLLSV
Trigger: GACTGAAAGCAAGGTGGCCCAGTGTGGGGTCATAGG...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCATTTAGCCTGAGGTTATaGAGGGCCCGGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPFSLRL*RARGKE
Trigger: CTCCTTCCCCCGGGCCCTCCATAACCTCAGGCTAAA...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCACATGGAGGCCCGGATaGCTTCGGGTGCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCTWRPG*LRVPSK
Trigger: CTTGGATGGCACCCGAAGTCATCCGGGCCTCCATGT...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGACATGGAGGCCCGGATaGCTTCGGGTGCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLTWRPG*LRVPSK
Trigger: CTTGGATGGCACCCGAAGTCATCCGGGCCTCCATGT...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCTTTTCTTTGGCCCTaGGTTGGTCAAACATCTCCT +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCPFLWP*VGQTSP
Trigger: AGGAGATGTTTGACCAACTCAGGGCCAAAGAAAAGG...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGTACTCGTGGCCGAGTTaGCTGGGGTGGGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLYSWPS*LGWAPH
Trigger: ATGAGGAGCCCACCCCAGTCAACTCGGCCACGAGTA...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGGGGCACCGCCCCGCTTaGGGCTGTTGGTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEGHRPA*GCWLAS
Trigger: TGACGCCAACCAACAGCCTCAAGCGGGGCGGTGCCC...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAAGGAGTCCGCCGGTaGCTGCTGGGCTGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPEGVRR*LLGCEG
Trigger: CCCCTCGCAGCCCAGCAGTCACCGGCGGACTCCTTC...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCCAGGGGGTCCAACCCTaGGAAAGGGCTGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPQGVQP*ERAVPA
Trigger: GGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTG...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGTGCTGGAGGGGCTCCTaGTGGCTAGGAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLCWRGS*WLGESL
Trigger: CAGAGACTCTCCTAGCCAGCAGGAGCCCCTCCAGCA...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACAAGGGTCCAGCCGTTaGCGGTTGGCAGAAGGACGC +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQQGSSR*RLAEGR
Trigger: GCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTG...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACTGCACAGCGGCACGGTaGTGTCCTGACTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDCTAAR*CPDSAP
Trigger: AGGGGCAGAGTCAGGACAGCACCGTGCCGCTGTGCA...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGATGGGCGGGTAGCAACTaGGGTCCTCGCCGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGWAGSN*GPRRRA
Trigger: AGCCCGGCGGCGAGGACCCCAGTTGCTACCCGCCCA...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGGCGAGTTTGTTCATaGCCACTCCATAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQGRVCS*PLHKRL
Trigger: CAGTCGCTTATGGAGTGGCCATGAACAAACTCGCCC...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTAAAGATGGTCGTGAGTaGGGATCAGGATTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPKDGRE*GSGFQQ
Trigger: CTGCTGGAATCCTGATCCCCACTCACGACCATCTTT...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTTTCTCCTGGCACAGCTaGTGGATGATGATGTTGAGC +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPFSWHS*WMMMLS
Trigger: GCTCAACATCATCATCCACCAGCTGTGCCAGGAGAA...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCACCGTGAACTTGTGCTaGAAATCAGAAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGTVNLC*KSEGRL
Trigger: CAGCCTCCCTTCTGATTTCCAGCACAAGTTCACGGT...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAAAAGGCTGGTGAACCCTaGCAGGGCCGGGCTACTCCT +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQKAGEP*QGRATP
Trigger: AGGAGTAGCCCGGCCCTGCCAGGGTTCACCAGCCTT...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCTCGCAGCGGCGGTGGTaGGCACCGCCCCGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSSQRRW*APPRLR
Trigger: CCTCAAGCGGGGCGGTGCCCACCACCGCCGCTGCGA...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCCTTCTCCTCCCGGGCTaGTGGCTCAGGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSLLLPG*WLRLLQ
Trigger: CTGGAGGAGCCTGAGCCACCAGCCCGGGAGGAGAAG...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGTGGAGGGGCTCCTGCTaGCTAGGAGAGTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLWRGSC*LGESLA
Trigger: AGCCAGAGACTCTCCTAGCCAGCAGGAGCCCCTCCA...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCAAGGCAAGGAAGACTGTaGAGGGTGGGGGACATGCAT +
Preference number: 4 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPRQGRL*RVGDMH
Trigger: ATGCATGTCCCCCACCCTCCACAGTCTTCCTTGCCT...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACAGCCTGGACCAGTCGGTaGCTGGACAGAGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTAWTSR*LDRAGD
Trigger: GTCCCCTGCTCTGTCCAGCCACCGACTGGTCCAGGC...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCGCTCAGATAAATAGGTaGGGCACCTGGAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGAQINR*GTWKCR
Trigger: TCTGCACTTCCAGGTGCCCCACCTATTTATCTGAGC...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGAACACCACGGCCCTaGGGCCCTCGCTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWGTPRP*GPRSPG
Trigger: CCCTGGGGAGCGAGGGCCCCAGGGCCGTGGTGTTCC...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCCATTCTCCACCTTCTaGAGGATCAATACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPPFSTF*RINTRA
Trigger: TGCCCTGGTATTGATCCTCCAGAAGGTGGAGAATGG...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554146.1
CDS-3UTR TCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGCTCCTTTGGGACGACTaGGCTCCTGCCCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLLLWDD*APAPGF
Trigger: AAAACCTGGGGCAGGAGCTCAGTCGTCCCAAAGGAG...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACGGGCACCGCCCCGCTTaGGGCTGTTGGTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHGHRPA*GCWLAS
Trigger: TGACGCCAACCAACAGCCTCAAGCGGGGCGGTGCCC...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCGGACGGCTGGACCTCTaGAAAAGACCCTCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCGRLDL*KRPSRL
Trigger: AAGACGGGAGGGTCTTTTTCAGAGGTCCAGCCGTCC...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCAAGGTAGAGTCCTGCTaGGTGTTCCAGCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCKVESC*VFQRLG
Trigger: CCCAAGGCGCTGGAACACTCAGCAGGACTCTACCTT...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCGGCACGGTGCTGTCCTaGCTCTGCCCCTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPGTVLS*LCPSAS
Trigger: GGATGCAGAGGGGCAGAGTCAGGACAGCACCGTGCC...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTACTGGCACCAGTGAGTaGGTCCCCCAAGAAACTATT +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPATGTSE*VPQETI
Trigger: AATAGTTTCTTGGGGGACTCACTCACTGGTGCCAGT...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACGTCCAGAGCCCAGCATaGGGGGCTACCTGTGCACAG +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDVQSPA*GATCAQ
Trigger: CTGTGCACAGGTAGCCCCTCATGCTGGGCTCTGGAC...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GACCTCCAAGACAAAAGACAGTGGAGCAGCATTCAGAGAGTCTTGAGGGAAGAGCGGCCTCGTCACCTCTaGCGCCGGTACCTGCTCGCG +
Preference number: 4 (lower is better)
Translates to: DLQDKRQWSSIQRVLREERPRHL*RRYLLA
Trigger: CGCGAGCAGGTACCGGCGGCAGAGGTGACGAGGCCG...CTCTTCCCTCAAGACTCTCTGAATGCTGCTCCACTGTCTTTTGTCTTGGAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACGCCGCCTATTGTTCATaGGCCTCCGCAGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDAAYCS*ASAELG
Trigger: TCCCAGCTCTGCGGAGGCGCATGAACAATAGGCGGC...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGGGCTGGAGAAGGCGCTaGGCGGGGTCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGGWRRR*AGSRSC
Trigger: GCAACTACGTGACCCCGCGCAGCGCCTTCTCCAGCC...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGTCTTCAGAATCTTGTTaGTCAGGTCTCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPSSESC*SGLHSP
Trigger: TGGAGAATGGAGACCTGAGCAACAAGATTCTGAAGA...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGCTCCACACATCACTaGCTTTGGAAAACATGGAGG +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGSSTHH*LWKTWR
Trigger: CCTCCATGTTTTCCAAAGGCAGTGATGTGTGGAGCT...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCACTGCTAAGCCATCAATaGCTCGAAAGGGCACCTCAC +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPLLSHQ*LERAPH
Trigger: GTGAGGTGCCCTTTCGAGGCATTGATGGCTTAGCAG...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTTGCACCGTGAACTTGTaGTGGAAATCAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPACTVNL*WKSEGR
Trigger: CCTCCCTTCTGATTTCCAGCACAAGTTCACGGTGCA...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGAATGATGGTGGGGCTTaGAGGAGGACTGGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLNDGGA*RRTGAA
Trigger: AGCCGCTCCAGTCCTCCTGCAAGCCCCACCATCATT...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCGGGAGCGTGTGGAGTTaGACTCGGAGATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCGSVWS*TRRWRR
Trigger: TCTCCTCCATCTCCGAGTGCAACTCCACACGCTCCC...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACTGCTGGGCGTCTCTGTaGTGGAGCTGTTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDCWASL*WSCWLG
Trigger: CCCCAGCCAACAGCTCCAGCACAGAGACGCCCAGCA...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGGGAGGGTGGGGGACATaGATGCACCCCTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGGGWGT*MHPFLP
Trigger: GGGGAGGAAGGGGTGCATGCATGTCCCCCACCCTCC...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCAATACTTGCTGGTTTaGCCTTTGCCGAGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPQYLLV*PLPRVS
Trigger: GGAAACTCTCGGCAAAGGGCAAACCAGCAAGTATTG...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCCCTGGAATGGTATTCTaGTGTCCAATCCTGAGACAC +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGPGMVF*CPILRH
Trigger: GTGTCTCAGGATTGGACAGCAGAATACCATTCCAGG...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCTGGGCGGGTAGCAACTaGGGTCCTCGCCGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSWAGSN*GPRRRA
Trigger: AGCCCGGCGGCGAGGACCCCAGTTGCTACCCGCCCA...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCATTCTCCACCTTCTaGAGGATCAATATGTTGCTG +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCPFSTF*RINMLL
Trigger: CAGCAACATATTGATCCTCCAGAAGGTGGAGAATGG...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCTGCCGCACTCATCTTaGTGGTTCGGTGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCLPHSS*WFGAIP
Trigger: GGGAATGGCACCGAACCACCAAGATGAGTGCGGCAG...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGCTGCCGCACTCATCTTaGTGGTTCGGTGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLLPHSS*WFGAIP
Trigger: GGGAATGGCACCGAACCACCAAGATGAGTGCGGCAG...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGGGCGAGTTTGTTCATaGCCACTCCATAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPGRVCS*PLHKRL
Trigger: CAGTCGCTTATGGAGTGGCCATGAACAAACTCGCCC...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGAAAGATGGTCGTGAGTaGGGATCAGGATTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQKDGRE*GSGFQQ
Trigger: CTGCTGGAATCCTGATCCCCACTCACGACCATCTTT...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGAACCAGACTCCTCTATaGTGGTTAGCTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQNQTPL*WLAGPG
Trigger: TCCTGGACCAGCTAACCACCATAGAGGAGTCTGGTT...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGTTCTCCTGGCACAGCTaGTGGATGATGATGTTGAGC +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQFSWHS*WMMMLS
Trigger: GCTCAACATCATCATCCACCAGCTGTGCCAGGAGAA...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGTCCCTTCTTCTTTaGGGCCCTCTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCPSLLL*GPLLLL
Trigger: GAGGAGGAGAAGAGGGCCCCAAAGAAGAAGGGACGG...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCGGCCCTTCACCAGGTTaGGGGCACTGGACGACCACT +
Preference number: 4 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSGPSPG*GHWTTT
Trigger: AGTGGTCGTCCAGTGCCCCCAACCTGGTGAAGGGCC...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCGCAGCGGCGGTGGTaGGCACCGCCCCGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGSQRRW*APPRLR
Trigger: CCTCAAGCGGGGCGGTGCCCACCACCGCCGCTGCGA...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAAGAAAAGCTTTCGGGATaGGGGGCTGGTGCTCCGACG +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQEKLSG*GAGAPT
Trigger: CGTCGGAGCACCAGCCCCCCATCCCGAAAGCTTTTC...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCTCGACTGGGCTGACTaGCATCTCATACACGACAAT +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPALDWAD*HLIHDN
Trigger: ATTGTCGTGTATGAGATGCCAGTCAGCCCAGTCGAG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCGTGGGAGTCAGAGATTaGTTAGGATCTCGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCVGVRD*LGSRLK
Trigger: CTTCAAACGAGATCCTAACCAATCTCTGACTCCCAC...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACTGGAGGGGCTCCTGCTaGCTAGGAGAGTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDWRGSC*LGESLA
Trigger: AGCCAGAGACTCTCCTAGCCAGCAGGAGCCCCTCCA...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCCCAGCGCCTTGGGGTTaGGGGGAAGACCACATTGGG +
Preference number: 4 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSPAPWG*GEDHIG
Trigger: CCCAATGTGGTCTTCCCCCCAACCCCAAGGCGCTGG...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGATCCCCTCATCTCCGCTaGCTGTCCCCCTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGSPHLR*LSPLPA
Trigger: GGCGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGA...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCATCCAACACTGGTGTTTaGGAAGCTGAACTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPSNTGV*EAELGA
Trigger: AGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGA...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTGCTCAGATAAATAGGTaGGGCACCTGGAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAAQINR*GTWKCR
Trigger: TCTGCACTTCCAGGTGCCCCACCTATTTATCTGAGC...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCGACTTGAGGCCCAAGTaGAAATGTGGAGATTCTGAT +
Preference number: 4 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCDLRPK*KCGDSD
Trigger: ATCAGAATCTCCACATTTCCACTTGGGCCTCAAGTC...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCCCCAAGTAGCTAGATaGGTACCCTCAATACTTGCT +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPPQVAR*VPSILA
Trigger: AGCAAGTATTGAGGGTACCCATCTAGCTACTTGGGG...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGAAGGGCATCACAACATaGATGGCCCAGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQKGITT*MAQLRV
Trigger: CACTCTCAACTGGGCCATCCATGTTGTGATGCCCTT...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCATTCCTACTCAGCTCATaGTCCAGAGCCCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPFLLSS*SRAQHE
Trigger: CTCATGCTGGGCTCTGGACCATGAGCTGAGTAGGAA...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCAACCTCTCACTCAATaGCAGGTGACCATCATTCAG +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPQPLTQ*QVTIIQ
Trigger: CTGAATGATGGTCACCTGCCATTGAGTGAGAGGTTG...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp TACAGAGGCCCCCGTACTTCCAGGGCCCAAGACGGGAAATGGATGAGGAAGCGGTCTCTATGGTCTGGCTaGTGTCCTCATCAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: YRGPRTSRAQDGKWMRKRSLWSG*CPHQGR
Trigger: ACGACCCTGATGAGGACATCAGCCAGACCATAGAGA...CCGCTTCCTCATCCATTTCCCGTCTTGGGCCCTGGAAGTACGGGGGCCTCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCCTTTTCTTTGGCCCTaGGTTGGTCAAACATCTCCT +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAPFLWP*VGQTSP
Trigger: AGGAGATGTTTGACCAACTCAGGGCCAAAGAAAAGG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACACTCGAAGGCGAGGAATaGTGGTGGGGCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTLEGEE*WWGLQE
Trigger: CTCCTGCAAGCCCCACCATCATTCCTCGCCTTCGAG...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAGAGGCAAGCTCCTTCTaGCCAAGCGTCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGEASSF*PSVPGP
Trigger: GGGGCCAGGGACGCTTGGTCAGAAGGAGCTTGCCTC...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACATACTCGTGGCCGAGTTaGCTGGGGTGGGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTYSWPS*LGWAPH
Trigger: ATGAGGAGCCCACCCCAGTCAACTCGGCCACGAGTA...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAAGCTCTACTCGGACATTaGCCAGGGGGTTGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQALLGH*PGGCGY
Trigger: GTACCCACAACCCCCTGGTCAATGTCCGAGTAGAGC...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGGCACGGTGCTGTCCTaGCTCTGCCCCTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPGTVLS*LCPSAS
Trigger: GGATGCAGAGGGGCAGAGTCAGGACAGCACCGTGCC...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCGCACACCCAACTGGCTaGGGAGAGGGAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPAHPTG*GEGAAD
Trigger: GTCTGCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGC...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCACAGGTGTGTAGGAGCTaGGAGATGGTAACTGTTCCT +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPQVCRS*EMVTVP
Trigger: AGGAACAGTTACCATCTCTCAGCTCCTACACACCTG...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCTGCCGCCGGTACCTaGTCGCGCAGCCGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKSAAGT*SRSRCP
Trigger: CGGGCACCGGCTGCGCGAGCAGGTACCGGCGGCAGA...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACAGTTGCTGGGGAAGATaGCCACCCGCTGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDSCWGR*PPAGSA
Trigger: AGCTGAACCAGCGGGTGGGCATCTTCCCCAGCAACT...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCGCGGGGTCACGTAGTTaGTGGGGAAGATGCCCACCC +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPAGSRS*WGRCPP
Trigger: GGGTGGGCATCTTCCCCAGCAACTACGTGACCCCGC...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTAGCTCCACACATCACTaGCTTTGGAAAACATGGAGG +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPASSTHH*LWKTWR
Trigger: CCTCCATGTTTTCCAAAGGCAGTGATGTGTGGAGCT...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACTCCTGGTTCTTCTGCTaGAGTGCAGCCCGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDSWFFC*SAARVS
Trigger: GCTGACGCGGGCTGCACTGCAGCAGAAGAACCAGGA...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACATCCTGGTTCTTCTGCTaGAGTGCAGCCCGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTSWFFC*SAARVS
Trigger: GCTGACGCGGGCTGCACTGCAGCAGAAGAACCAGGA...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCGGACGACTGAGCTCCTaGCCCAGGTTTTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCGRLSS*PRFCCF
Trigger: AAAGCAGCAAAACCTGGGGCAGGAGCTCAGTCGTCC...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGGGACGACTGAGCTCCTaGCCCAGGTTTTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLGRLSS*PRFCCF
Trigger: AAAGCAGCAAAACCTGGGGCAGGAGCTCAGTCGTCC...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCACTGGACGACCACTaGTTATATCCATCTACCAGG +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPALDDH*LYPSTR
Trigger: CCTGGTAGATGGATATAAGCAGTGGTCGTCCAGTGC...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACGGGAGCGTGTGGAGTTaGACTCGGAGATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDGSVWS*TRRWRR
Trigger: TCTCCTCCATCTCCGAGTGCAACTCCACACGCTCCC...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCTGTTGGCTGGGGAGGTaGTGCGGGCATGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSCWLGR*CGHGWG
Trigger: CCCCCAGCCATGCCCGCAGCACCTCCCCAGCCAACA...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGTGTTGGCTGGGGAGGTaGTGCGGGCATGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLCWLGR*CGHGWG
Trigger: CCCCCAGCCATGCCCGCAGCACCTCCCCAGCCAACA...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACCTGACTCTGCCCCTCTaGATCCAGGTCCAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDLTLPL*IQVQER
Trigger: ACGCTCCTGGACCTGGATGCAGAGGGGCAGAGTCAG...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTGCACAGCGGCACGGTaGTGTCCTGACTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPCTAAR*CPDSAP
Trigger: AGGGGCAGAGTCAGGACAGCACCGTGCCGCTGTGCA...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGTGCACAGCGGCACGGTaGTGTCCTGACTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGCTAAR*CPDSAP
Trigger: AGGGGCAGAGTCAGGACAGCACCGTGCCGCTGTGCA...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGCGGGTAGAAAGGCCCTaGAGGGCAGGAGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPERVERP*RAGDPL
Trigger: CAGAGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCG...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTTGCTGGTTTGCCCTTTaGCGAGAGTTTCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPCWFAL*REFPKR
Trigger: TCTTTTTGGAAACTCTCGGCAAAGGGCAAACCAGCA...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGCCAGGATACATCTTTaGCTCACTCTGATGGTGATG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQARIHL*LTLMVM
Trigger: CATCACCATCAGAGTGAGGCAAAGATGTATCCTGGC...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACAGCCGAGAAGCGCTCTaGAGGGCTCCATGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHSREAL*RAPWSG
Trigger: GCCGCTCCATGGAGCCCTCCAGAGCGCTTCTCGGCT...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCCCATTCTCCACCTTCTaGAGGATCAATATGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGPFSTF*RINMLL
Trigger: CAGCAACATATTGATCCTCCAGAAGGTGGAGAATGG...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCTTTGGCAAAAGGTTCTaGGCACGTAGAAGGAATAGG +
Preference number: 4 (lower is better)
Translates to: ELMATAPPVDTGRKALQGFGKRF*ARRRNR
Trigger: CCTATTCCTTCTACGTGCCCAGAACCTTTTGCCAAA...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAAACCAGACTCCTCTATaGTGGTTAGCTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPNQTPL*WLAGPG
Trigger: TCCTGGACCAGCTAACCACCATAGAGGAGTCTGGTT...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCATTCTCCTGGCACAGCTaGTGGATGATGATGTTGAGC +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPFSWHS*WMMMLS
Trigger: GCTCAACATCATCATCCACCAGCTGTGCCAGGAGAA...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCATTTGCTGCTTTCACCTaGTGTCAACTGGATGGCTCG +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPFAAFT*CQLDGS
Trigger: CGAGCCATCCAGTTGACACCAGGTGAAAGCAGCAAA...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACCGTCCCTTCTTCTTTaGGGCCCTCTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQPSLLL*GPLLLL
Trigger: GAGGAGGAGAAGAGGGCCCCAAAGAAGAAGGGACGG...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGGGCCCTTCACCAGGTTaGGGGCACTGGACGACCACT +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEGPSPG*GHWTTT
Trigger: AGTGGTCGTCCAGTGCCCCCAACCTGGTGAAGGGCC...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAGGCCGGGCTACTCCTTaGGCCCTTCACCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGGRATP*ALHQVG
Trigger: CCCAACCTGGTGAAGGGCCCAAGGAGTAGCCCGGCC...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCAAGGCTGGTGAACCCTaGCAGGGCCGGGCTACTCCT +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPKAGEP*QGRATP
Trigger: AGGAGTAGCCCGGCCCTGCCAGGGTTCACCAGCCTT...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCCGTGGCCGAGTTGACTaGGGTGGGCTCCTCATGGAT +
Preference number: 4 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSRGRVD*GGLLMD
Trigger: ATCCATGAGGAGCCCACCCCAGTCAACTCGGCCACG...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGCTTGAGGCTGTTGGTTaGCGTCAGCTGAGGGGTACT +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLLEAVG*RQLRGT
Trigger: AGTACCCCTCAGCTGACGCCAACCAACAGCCTCAAG...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCTCGCAGCGGCGGTGGTaGGCACCGCCCCGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLSQRRW*APPRLR
Trigger: CCTCAAGCGGGGCGGTGCCCACCACCGCCGCTGCGA...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTACCTCGCAGCGGCGGTaGTGGGCACCGCCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSTSQRR*WAPPRL
Trigger: CAAGCGGGGCGGTGCCCACCACCGCCGCTGCGAGGT...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCTCCTCCCGGGCTGGTaGCTCAGGCTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVLLPGW*LRLLQG
Trigger: CCCCTGGAGGAGCCTGAGCCACCAGCCCGGGAGGAG...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTCTTCTCCTCCCGGGCTaGTGGCTCAGGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPLLLPG*WLRLLQ
Trigger: CTGGAGGAGCCTGAGCCACCAGCCCGGGAGGAGAAG...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGTCCGACGAGGACGGCTaGACCTCTGAAAAAGACCCT +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLSDEDG*TSEKDP
Trigger: AGGGTCTTTTTCAGAGGTCCAGCCGTCCTCGTCGGA...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACAGGGAGGGGCCTCGACTaGGCTGACTGGCATCTCATA +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTGRGLD*ADWHLI
Trigger: TATGAGATGCCAGTCAGCCCAGTCGAGGCCCCTCCC...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACATGGAGGGGCTCCTGCTaGCTAGGAGAGTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTWRGSC*LGESLA
Trigger: AGCCAGAGACTCTCCTAGCCAGCAGGAGCCCCTCCA...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGCCAGCCGTTGCCGGTTaGCAGAAGGACGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWPAVAG*QKDAAE
Trigger: CTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGG...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCGGAGACCCTCTGAAGTaGCCCTGTTTCCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCGDPLK*PCFHPF
Trigger: GAAGGGATGGAAACAGGGCCACTTCAGAGGGTCTCC...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGAGGCAAGGAAGACTGTaGAGGGTGGGGGACATGCAT +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLRQGRL*RVGDMH
Trigger: ATGCATGTCCCCCACCCTCCACAGTCTTCCTTGCCT...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTGTCCCAATGTCCAGGTaGCCATATGGTATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAVPMSR*PYGILL
Trigger: AAGCAGAATACCATATGGCCACCTGGACATTGGGAC...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTGCGGCAGAAGGGCATaGGCCCGACCAGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGCGRRA*ARPGPP
Trigger: TGGGGGCCCTGGTCGGGCCCATGCCCTTCTGCCGCA...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCATGTGCACCCCTGGAATaGTATTCTGCTGTCCAATCC +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPCAPLE*YSAVQS
Trigger: GGATTGGACAGCAGAATACCATTCCAGGGGTGCACA...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCCAGGCCAAAATCAGTaGTCTTCAGAATCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAPGQNQ*SSESCC
Trigger: GCAACAAGATTCTGAAGATCACTGATTTTGGCCTGG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCCTCGAAGGCGAGGAATaGTGGTGGGGCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPLEGEE*WWGLQE
Trigger: CTCCTGCAAGCCCCACCATCATTCCTCGCCTTCGAG...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCGAGGCAAGCTCCTTCTaGCCAAGCGTCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSEASSF*PSVPGP
Trigger: GGGGCCAGGGACGCTTGGTCAGAAGGAGCTTGCCTC...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAATGGGCTCCTCCTTCTTaGAAAGCTTTCGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQWAPPS*KAFGMG
Trigger: CCCCATCCCGAAAGCTTTTCAAGAAGGAGGAGCCCA...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGGAAGGAGTCCGCCGGTaGCTGCTGGGCTGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKEGVRR*LLGCEG
Trigger: CCCCTCGCAGCCCAGCAGTCACCGGCGGACTCCTTC...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGCAGGGGGTCCAACCCTaGGAAAGGGCTGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGQGVQP*ERAVPA
Trigger: GGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTG...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGGCTCATGGTTTAGCCTaGGGTTATGGAGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGAHGLA*GYGGPG
Trigger: CCCGGGCCCTCCATAACCTCAGGCTAAACCATGAGC...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCTCCTGATCATGGAGTaGGCCCAACACGAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCLLIME*AQHEEQ
Trigger: TTGCTCTTCGTGTTGGGCTCACTCCATGATCAGGAG...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGGGCCTTGGACTTCAGTaGGCGCAGGGCAAGGAACAC +
Preference number: 4 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGGLGLQ*AQGKEH
Trigger: GTGTTCCTTGCCCTGCGCTCACTGAAGTCCAAGGCC...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGATCGTCGCCGGACACCTaGGAGTCCTTGGACAGCACC +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGSSPDT*ESLDST
Trigger: GGTGCTGTCCAAGGACTCGCAGGTGTCCGGCGACGA...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCTGTTTCCAGTTGTCCTaGAGGCAGTGGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCCFQLS*RQWKES
Trigger: GGACTCCTTCCACTGCCTGCAGGACAACTGGAAACA...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGTGTTTCCAGTTGTCCTaGAGGCAGTGGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLCFQLS*RQWKES
Trigger: GGACTCCTTCCACTGCCTGCAGGACAACTGGAAACA...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCATGGTAGGGGAGGCCTaGACCGTGAACTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSMVGEA*TVNLCW
Trigger: CCAGCACAAGTTCACGGTGCAGGCCTCCCCTACCAT...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACATGGTAGGGGAGGCCTaGACCGTGAACTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDMVGEA*TVNLCW
Trigger: CCAGCACAAGTTCACGGTGCAGGCCTCCCCTACCAT...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCTCCTGCCCCAGGTTTTaGTGCTTTCACCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCSCPRF*CFHLVS
Trigger: TGACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGA...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAGTCCGCCGGTGACTaGTGGGCTGCGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQESAGD*WAARGW
Trigger: CCACCCCCTCGCAGCCCAGCAGTCACCGGCGGACTC...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTGAGTCCGCCGGTGACTaGTGGGCTGCGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SMKGLRTQKSSYLEPSQIESAGD*WAARGW
Trigger: CCACCCCCTCGCAGCCCAGCAGTCACCGGCGGACTC...AATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCGAGTCCGCCGGTGACTaGTGGGCTGCGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLESAGD*WAARGW
Trigger: CCACCCCCTCGCAGCCCAGCAGTCACCGGCGGACTC...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAGTCCGCCGGTGACTaGTGGGCTGCGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLESAGD*WAARGW
Trigger: CCACCCCCTCGCAGCCCAGCAGTCACCGGCGGACTC...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTGTTGGCTGGGGAGGTaGTGCGGGCATGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGCWLGR*CGHGWG
Trigger: CCCCCAGCCATGCCCGCAGCACCTCCCCAGCCAACA...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCCTGACTCTGCCCCTCTaGATCCAGGTCCAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPLTLPL*IQVQER
Trigger: ACGCTCCTGGACCTGGATGCAGAGGGGCAGAGTCAG...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTCCTGAGAAAGGGCTGTaGCCGCCAGCTCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPPEKGL*PPAPLI
Trigger: GATGAGGGGAGCTGGCGGGCACAGCCCTTTCTCAGG...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACGCCCCACTGAGAGAGTaGAGCAGTCAGGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHAPLRE*SSQGPI
Trigger: GATGGGCCCCTGACTGCTGCACTCTCTCAGTGGGGC...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAAAGGGATGCCACAGGATaGCAAGTGAAGAGGATCCGC +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQRDATG*QVKRIR
Trigger: GCGGATCCTCTTCACTTGGCATCCTGTGGCATCCCT...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGCCATTCTCCACCTTCTaGAGGATCAATATGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQPFSTF*RINMLL
Trigger: CAGCAACATATTGATCCTCCAGAAGGTGGAGAATGG...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACCTGCCGCACTCATCTTaGTGGTTCGGTGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDLPHSS*WFGAIP
Trigger: GGGAATGGCACCGAACCACCAAGATGAGTGCGGCAG...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGTTTGGCAAAAGGTTCTaGGCACGTAGAAGGAATAGG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQFGKRF*ARRRNR
Trigger: CCTATTCCTTCTACGTGCCCAGAACCTTTTGCCAAA...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TACAGAGGCCCCCGTACTTCCAGGGCCCAAGACGGGAAATGGATGAGGAAGCGGTTCTCCTGGCACAGCTaGTGGATGATGATGTTGAGC +
Preference number: 4 (lower is better)
Translates to: YRGPRTSRAQDGKWMRKRFSWHS*WMMMLS
Trigger: GCTCAACATCATCATCCACCAGCTGTGCCAGGAGAA...CCGCTTCCTCATCCATTTCCCGTCTTGGGCCCTGGAAGTACGGGGGCCTCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAAAGGCTGGTGAACCCTaGCAGGGCCGGGCTACTCCT +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGKAGEP*QGRATP
Trigger: AGGAGTAGCCCGGCCCTGCCAGGGTTCACCAGCCTT...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGCTCTCCACGAGGGAATaGGATACAGAGGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLLSTRE*DTEVGL
Trigger: CAGTCCTACCTCTGTATCCCATTCCCTCGTGGAGAG...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGACTCCTCCCGGGCTGGTaGCTCAGGCTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARLLPGW*LRLLQG
Trigger: CCCCTGGAGGAGCCTGAGCCACCAGCCCGGGAGGAG...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGGGGAGGGGCCTCGACTaGGCTGACTGGCATCTCATA +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEGRGLD*ADWHLI
Trigger: TATGAGATGCCAGTCAGCCCAGTCGAGGCCCCTCCC...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGGTGCTGCGGGCATaGCTGGGGGACACAAACCAC +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPEVLRA*LGDTNH
Trigger: GTGGTTTGTGTCCCCCAGCCATGCCCGCAGCACCTC...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCAGGAGTCCAGGTTGCTaGGCGTCTCTGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPRSPGC*ASLCWS
Trigger: GCTCCAGCACAGAGACGCCCAGCAACCTGGACTCCT...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCCAAAGCAAAGTGGGAATTCAAGGACACGGGGTCAGGACACATGAACAAGACAGAACGGGAGCAGGGCTaGAAGTCCAGGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PKAKWEFKDTGSGHMNKTEREQG*KSRPLL
Trigger: GAGGAGCGGCCTGGACTTCCAGCCCTGCTCCCGTTC...TGTCTTGTTCATGTGTCCTGACCCCGTGTCCTTGAATTCCCACTTTGCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGAACGGGAGCAGGGCTaGAAGTCCAGGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLEREQG*KSRPLL
Trigger: GAGGAGCGGCCTGGACTTCCAGCCCTGCTCCCGTTC...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCGGCAGCGGCCCTGCCTaGAACGGGAGCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLGSGPA*NGSRAG
Trigger: TCCAGCCCTGCTCCCGTTCCAGGCAGGGCCGCTGCC...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACCCACAGCCCCTCCAGTaGACACGGGTAGAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHPQPLQ*TRVERP
Trigger: GGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGGAAGACTGTGGAGGGTaGGGGACATGCATGCACCCC +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEEDCGG*GTCMHP
Trigger: GGGGTGCATGCATGTCCCCCACCCTCCACAGTCTTC...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGAGCAGCAGACAGATTTaGCTGAGTGACTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLSSRQI*LSDSAG
Trigger: CCCTGCAGAGTCACTCAGCCAAATCTGTCTGCTGCT...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGACTGTTCCTTCTTCATaGATGCTCACAGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQTVPSS*MLTVAP
Trigger: AGGTGCTACTGTGAGCATCCATGAAGAAGGAACAGT...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCAAATCCCAAAGCAAAGTaGGAATTCAAGGACACGGGG +
Preference number: 4 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPNPKAK*EFKDTG
Trigger: CCCCGTGTCCTTGAATTCCCACTTTGCTTTGGGATT...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTACATGGAGGCCCGGATaGCTTCGGGTGCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPTWRPG*LRVPSK
Trigger: CTTGGATGGCACCCGAAGTCATCCGGGCCTCCATGT...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCAGCCGGCTCTTCCTaGACTTGCCCTTGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSSAGSS*TCPCVS
Trigger: AGAAACGCAAGGGCAAGTTCAGGAAGAGCCGGCTGA...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTTGCGGTTGCCATCCTTaGGCTTCAGCCGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPCGCHP*ASAGSS
Trigger: GGAAGAGCCGGCTGAAGCTCAAGGATGGCAACCGCA...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGTTGGTTGGCGTCAGCTaGGGGGTACTCGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GLGHRKAPISNQARFPFLLVGVS*GVLVAE
Trigger: CTCGGCCACGAGTACCCCTCAGCTGACGCCAACCAA...CAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCGGACGGCTGGACCTCTaGAAAAGACCCTCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPGRLDL*KRPSRL
Trigger: AAGACGGGAGGGTCTTTTTCAGAGGTCCAGCCGTCC...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGGGACGGCTGGACCTCTaGAAAAGACCCTCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEGRLDL*KRPSRL
Trigger: AAGACGGGAGGGTCTTTTTCAGAGGTCCAGCCGTCC...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCGCAGACAGATTTGGCTaGGTGACTCTGCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSADRFG*VTLQGH
Trigger: GTGACCCTGCAGAGTCACTCAGCCAAATCTGTCTGC...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGCCAGCACCTGAGTGGTaGGCACCCACCCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLPAPEW*APTQVA
Trigger: TGCTACCTGGGTGGGTGCTCACCACTCAGGTGCTGG...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACGCCTCACTCAGGACCTaGGGGGAAGGGCAAGTAAAA +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDASLRT*GEGQVK
Trigger: TTTTACTTGCCCTTCCCCTCAGGTCCTGAGTGAGGC...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGAATCAGAAAAGAAAGTaGGCAAGTTCATCACCTCCC +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQNQKRK*ASSSPP
Trigger: GGGAGGTGATGAACTTGCTCACTTTCTTTTCTGATT...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTCGTCGCCGGACACCTaGGAGTCCTTGGACAGCACC +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCSSPDT*ESLDST
Trigger: GGTGCTGTCCAAGGACTCGCAGGTGTCCGGCGACGA...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTGCGGGGTCACGTAGTTaGTGGGGAAGATGCCCACCC +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCAGSRS*WGRCPP
Trigger: GGGTGGGCATCTTCCCCAGCAACTACGTGACCCCGC...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACATCCCTCTGGCAATCTaGACAGCCCAATTCACCAGG +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDIPLAI*TAQFTR
Trigger: CCTGGTGAATTGGGCTGTGCAGATTGCCAGAGGGAT...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGATCTTGGTGGTTCGGTaGCATTCCCGAGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGILVVR*HSRARP
Trigger: TGGCCTGGCTCGGGAATGGCACCGAACCACCAAGAT...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGATCCTGGTTCTTCTGCTaGAGTGCAGCCCGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGSWFFC*SAARVS
Trigger: GCTGACGCGGGCTGCACTGCAGCAGAAGAACCAGGA...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTTCCTCCTGGTTCTTCTaGTGCAGTGCAGCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPSSWFF*CSAARV
Trigger: GACGCGGGCTGCACTGCAGCAGAAGAACCAGGAGGA...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGTGCACCGTGAACTTGTaGTGGAAATCAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLCTVNL*WKSEGR
Trigger: CCTCCCTTCTGATTTCCAGCACAAGTTCACGGTGCA...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGATGGTAGGGGAGGCCTaGACCGTGAACTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGMVGEA*TVNLCW
Trigger: CCAGCACAAGTTCACGGTGCAGGCCTCCCCTACCAT...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCGGGAGCGTGTGGAGTTaGACTCGGAGATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPGSVWS*TRRWRR
Trigger: TCTCCTCCATCTCCGAGTGCAACTCCACACGCTCCC...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCTGCTGGGCGTCTCTGTaGTGGAGCTGTTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSCWASL*WSCWLG
Trigger: CCCCAGCCAACAGCTCCAGCACAGAGACGCCCAGCA...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTCGGGTAGAAAGGCCCTaGAGGGCAGGAGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCRVERP*RAGDPL
Trigger: CAGAGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCG...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCACACATCACTGCCTTTaGAAAACATGGAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCTHHCL*KTWRPG
Trigger: TCCGGGCCTCCATGTTTTCCAAAGGCAGTGATGTGT...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGTTTGCTGCTTTCACCTaGTGTCAACTGGATGGCTCG +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLFAAFT*CQLDGS
Trigger: CGAGCCATCCAGTTGACACCAGGTGAAAGCAGCAAA...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTCGTGGCCGAGTTGACTaGGGTGGGCTCCTCATGGAT +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPRGRVD*GGLLMD
Trigger: ATCCATGAGGAGCCCACCCCAGTCAACTCGGCCACG...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGACGTGGCCGAGTTGACTaGGGTGGGCTCCTCATGGAT +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGRGRVD*GGLLMD
Trigger: ATCCATGAGGAGCCCACCCCAGTCAACTCGGCCACG...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAGCAGCAGGGAGCGTGTaGAGTTGCACTCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGAAGSV*SCTRRW
Trigger: CCATCTCCGAGTGCAACTCCACACGCTCCCTGCTGC...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGCAGCAGGGAGCGTGTaGAGTTGCACTCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPAAGSV*SCTRRW
Trigger: CCATCTCCGAGTGCAACTCCACACGCTCCCTGCTGC...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCTCGACTGGGCTGACTaGCATCTCATACACGACAAT +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCLDWAD*HLIHDN
Trigger: ATTGTCGTGTATGAGATGCCAGTCAGCCCAGTCGAG...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAGGGAGGGGCCTCGACTaGGCTGACTGGCATCTCATA +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGGRGLD*ADWHLI
Trigger: TATGAGATGCCAGTCAGCCCAGTCGAGGCCCCTCCC...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACGGTCTCGGCTGGGACTaGGGGTTTTCAACATTCCTG +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDGLGWD*GFSTFL
Trigger: CAGGAATGTTGAAAACCCCCAGTCCCAGCCGAGACC...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCGGGGGAAGACCACATTaGGGTCAGGGAGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSGGRPH*GQGDGG
Trigger: TCCCCCGTCTCCCTGACCCCAATGTGGTCTTCCCCC...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAACCAGCCGTTGCCGGTTaGCAGAAGGACGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQPAVAG*QKDAAE
Trigger: CTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGG...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGATGCTGCGGGCATGGCTaGGGGACACAAACCACCAAG +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGCCGHG*GTQTTK
Trigger: CTTGGTGGTTTGTGTCCCCCAGCCATGCCCGCAGCA...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTTCCCCTCATCTCCGCTaGCTGTCCCCCTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSSPHLR*LSPLPA
Trigger: GGCGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGA...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGCCACAGCCCCTCCAGTaGACACGGGTAGAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLPQPLQ*TRVERP
Trigger: GGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGCCACAGCCCCTCCAGTaGACACGGGTAGAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GLGHRKAPISNQARFPFLPQPLQ*TRVERP
Trigger: GGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG...CAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACGAAGACTGTGGAGGGTaGGGGACATGCATGCACCCC +
Preference number: 4 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHEDCGG*GTCMHP
Trigger: GGGGTGCATGCATGTCCCCCACCCTCCACAGTCTTC...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGCTGCGCACACCCAACTaGCTGAGGAGAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLLRTPN*LRRGSS
Trigger: GCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGCGCAG...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTTGGGCACCACCCAACTaGCTGCCAGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPWAPPN*LPARPS
Trigger: AGATGGCCTTGCTGGCAGCCAGTTGGGTGGTGCCCA...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554146.1
ENST00000555993.6
CDS-3UTR CCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACACCTATGACCCCACACTaGGCCACCTTGCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTPMTPH*ATLLSV
Trigger: GACTGAAAGCAAGGTGGCCCAGTGTGGGGTCATAGG...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGATACAGATGTGCTCATaGTTTAGCCTGAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: PELMATAPPVDTGRKALQIQMCS*FSLRLW
Trigger: CCATAACCTCAGGCTAAACCATGAGCACATCTGTAT...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCTCTGTGCAGGACTCATaGCCCCAGGACCATACATTT +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCSVQDS*PQDHTF
Trigger: AAATGTATGGTCCTGGGGCCATGAGTCCTGCACAGA...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGTCTGTGCACCCCTaGAATGGTATTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQLSVHP*NGILLS
Trigger: GGACAGCAGAATACCATTCCAGGGGTGCACAGACAG...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACGCTCACGGCCTTCAGTaGTATTGGGAGAAGAGCTAC +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDAHGLQ*YWEKSY
Trigger: GTAGCTCTTCTCCCAATACCACTGAAGGCCGTGAGC...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCACATGGAGGCCCGGATaGCTTCGGGTGCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSTWRPG*LRVPSK
Trigger: CTTGGATGGCACCCGAAGTCATCCGGGCCTCCATGT...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGACATGGAGGCCCGGATaGCTTCGGGTGCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLTWRPG*LRVPSK
Trigger: CTTGGATGGCACCCGAAGTCATCCGGGCCTCCATGT...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACCGTGAAAGATGGTCGTaGGTGGGGATCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDRERWS*VGIRIP
Trigger: TGGAATCCTGATCCCCACTCACGACCATCTTTCACG...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACAGGTCCAGGATATTCGTaGAAGATGGTCGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTGPGYS*KMVVSG
Trigger: CCCACTCACGACCATCTTTCACGAATATCCTGGACC...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCTGCGGTTGCCATCCTTaGGCTTCAGCCGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSCGCHP*ASAGSS
Trigger: GGAAGAGCCGGCTGAAGCTCAAGGATGGCAACCGCA...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGCTCGAAGGCGAGGAATaGTGGTGGGGCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLLEGEE*WWGLQE
Trigger: CTCCTGCAAGCCCCACCATCATTCCTCGCCTTCGAG...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCGGGCCTCGACTGGGCTaGCTGGCATCTCATACACGA +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSGPRLG*LASHTR
Trigger: TCGTGTATGAGATGCCAGTCAGCCCAGTCGAGGCCC...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GACCTCCAAGACAAAAGACAGTGGAGCAGCATTCAGAGAGTCTTGAGGGAAGAGGGGCCTCGACTGGGCTaGCTGGCATCTCATACACGA +
Preference number: 4 (lower is better)
Translates to: DLQDKRQWSSIQRVLREEGPRLG*LASHTR
Trigger: TCGTGTATGAGATGCCAGTCAGCCCAGTCGAGGCCC...CTCTTCCCTCAAGACTCTCTGAATGCTGCTCCACTGTCTTTTGTCTTGGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGCTCTACTCGGACATTaGCCAGGGGGTTGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPALLGH*PGGCGY
Trigger: GTACCCACAACCCCCTGGTCAATGTCCGAGTAGAGC...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGGCACGGTGCTGTCCTaGCTCTGCCCCTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLGTVLS*LCPSAS
Trigger: GGATGCAGAGGGGCAGAGTCAGGACAGCACCGTGCC...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACGTCTTCCTGCTAGCATaGAAGGGCTTAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDVFLLA*KGLGHR
Trigger: TCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGAC...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCACTTGGTGGGCCCCTTaGACCAAAGTGCTAATGGGC +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPTWWAP*TKVLMG
Trigger: GCCCATTAGCACTTTGGTTCAAGGGGCCCACCAAGT...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCATCTTCAGAATCTTGTTaGTCAGGTCTCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPSSESC*SGLHSP
Trigger: TGGAGAATGGAGACCTGAGCAACAAGATTCTGAAGA...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGCCAAGCATACGTCCCTaGCGCACTCATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEPSIRP*RTHLGG
Trigger: ACCACCAAGATGAGTGCGGCAGGGACGTATGCTTGG...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCCTGCTAAGCCATCAATaGCTCGAAAGGGCACCTCAC +
Preference number: 4 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSLLSHQ*LERAPH
Trigger: GTGAGGTGCCCTTTCGAGGCATTGATGGCTTAGCAG...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCTCCTGGTTCTTCTGCTaGAGTGCAGCCCGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSSWFFC*SAARVS
Trigger: GCTGACGCGGGCTGCACTGCAGCAGAAGAACCAGGA...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTTGTTCAGTTCCGCTCTaGACAGCGGCACGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPCSVPL*TAARCC
Trigger: ACAGCACCGTGCCGCTGTGCAGAGCGGAACTGAACA...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACTGTTCAGTTCCGCTCTaGACAGCGGCACGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHCSVPL*TAARCC
Trigger: ACAGCACCGTGCCGCTGTGCAGAGCGGAACTGAACA...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGCCTGAGAAAGGGCTGTaGCCGCCAGCTCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGPEKGL*PPAPLI
Trigger: GATGAGGGGAGCTGGCGGGCACAGCCCTTTCTCAGG...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCGGGTAGAAAGGCCCTaGAGGGCAGGAGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVRVERP*RAGDPL
Trigger: CAGAGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCG...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAAAGTGCAGATAGGCAGTaGCAGGTCTATCAAGCCCTA +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQSADRQ*QVYQAL
Trigger: TAGGGCTTGATAGACCTGGCACTGCCTATCTGCACT...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACGGTACCCTCAATACTTaGTGGTTTGCCCTTTGCCGA +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDGTLNT*WFALCR
Trigger: TCGGCAAAGGGCAAACCAGCAAGTATTGAGGGTACC...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGCCGAGAAGCGCTCTaGAGGGCTCCATGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSSREAL*RAPWSG
Trigger: GCCGCTCCATGGAGCCCTCCAGAGCGCTTCTCGGCT...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTCCTCATCAGGGTCGTaGCGAGCTGCTTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPSSSGS*RAAFTA
Trigger: TGCTGTGAAAGCAGCTCGCCACGACCCTGATGAGGA...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGAAGAGCTTGGCCTCTTaGCGAACATTCTCTATGGTC +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLKSLAS*RTFSMV
Trigger: GACCATAGAGAATGTTCGCCAAGAGGCCAAGCTCTT...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCAAGAGCTTGGCCTCTTaGCGAACATTCTCTATGGTC +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCKSLAS*RTFSMV
Trigger: GACCATAGAGAATGTTCGCCAAGAGGCCAAGCTCTT...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGATTCACCAGGATGTCTaGGGGAATCCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLIHQDV*GNPFPR
Trigger: TCTGGGAAAAGGATTCCCCCAGACATCCTGGTGAAT...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCAGACTCCTCTATGGTaGTTAGCTGGTCCAGGATAT +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCQTPLW*LAGPGY
Trigger: ATATCCTGGACCAGCTAACCACCATAGAGGAGTCTG...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAAACCGTGAACTTGTGCTaGAAATCAGAAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQTVNLC*KSEGRL
Trigger: CAGCCTCCCTTCTGATTTCCAGCACAAGTTCACGGT...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGGGCCCTTCACCAGGTTaGGGGCACTGGACGACCACT +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGGPSPG*GHWTTT
Trigger: AGTGGTCGTCCAGTGCCCCCAACCTGGTGAAGGGCC...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGGCCGGGCTACTCCTTaGGCCCTTCACCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRGRATP*ALHQVG
Trigger: CCCAACCTGGTGAAGGGCCCAAGGAGTAGCCCGGCC...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGAAGGCTGGTGAACCCTaGCAGGGCCGGGCTACTCCT +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGKAGEP*QGRATP
Trigger: AGGAGTAGCCCGGCCCTGCCAGGGTTCACCAGCCTT...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACACTCTCCACGAGGGAATaGGATACAGAGGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTLSTRE*DTEVGL
Trigger: CAGTCCTACCTCTGTATCCCATTCCCTCGTGGAGAG...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAACTTCTCCTCCCGGGCTaGTGGCTCAGGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQLLLPG*WLRLLQ
Trigger: CTGGAGGAGCCTGAGCCACCAGCCCGGGAGGAGAAG...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCGAAAAGCTTTCGGGATaGGGGGCTGGTGCTCCGACG +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSEKLSG*GAGAPT
Trigger: CGTCGGAGCACCAGCCCCCCATCCCGAAAGCTTTTC...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGAAAAGCTTTCGGGATaGGGGGCTGGTGCTCCGACG +
Preference number: 4 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWEKLSG*GAGAPT
Trigger: CGTCGGAGCACCAGCCCCCCATCCCGAAAGCTTTTC...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGTTGACCAGGGGGTTGTaGGTACATGGACTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGLTRGL*VHGLRG
Trigger: TCCCCTGAGTCCATGTACCCACAACCCCCTGGTCAA...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGTTGACCAGGGGGTTGTaGGTACATGGACTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPELTRGL*VHGLRG
Trigger: TCCCCTGAGTCCATGTACCCACAACCCCCTGGTCAA...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCCAGCCGTTGCCGGTTaGCAGAAGGACGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDPAVAG*QKDAAE
Trigger: CTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGG...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGAGGAGTCCAGGTTGCTaGGCGTCTCTGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLRSPGC*ASLCWS
Trigger: GCTCCAGCACAGAGACGCCCAGCAACCTGGACTCCT...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAGAACGGGAGCAGGGCTaGAAGTCCAGGCCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISAREREQG*KSRPLL
Trigger: GAGGAGCGGCCTGGACTTCCAGCCCTGCTCCCGTTC...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTGAAGACTGTGGAGGGTaGGGGACATGCATGCACCCC +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCEDCGG*GTCMHP
Trigger: GGGGTGCATGCATGTCCCCCACCCTCCACAGTCTTC...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAGGCAAGGAAGACTGTaGAGGGTGGGGGACATGCAT +
Preference number: 4 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGRQGRL*RVGDMH
Trigger: ATGCATGTCCCCCACCCTCCACAGTCTTCCTTGCCT...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCAGCCTTGCGAGTAGCTaGGATTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPSLASS*DYRHVP
Trigger: TGGCACGTGCCTGTAATCCCAGCTACTCGCAAGGCT...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCATCTACTCAGCCTCCTaGCAGCAGTCTGGATCCCCA +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPIYSAS*QQSGSP
Trigger: TGGGGATCCAGACTGCTGCCAGGAGGCTGAGTAGAT...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCGACACAACTCCTCCTTaGGCAAAGGGCAATCTCAAA +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCDTTPP*AKGNLK
Trigger: TTTGAGATTGCCCTTTGCCCAAGGAGGAGTTGTGTC...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAATCCAGCAGTCTTCCATaGGTTTGGCAAAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQSSSLP*VWQKVL
Trigger: CAGAACCTTTTGCCAAACTCATGGAAGACTGCTGGA...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTTCAGCCGGCTCTTCCTaGACTTGCCCTTGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPSAGSS*TCPCVS
Trigger: AGAAACGCAAGGGCAAGTTCAGGAAGAGCCGGCTGA...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGATTGGTTGGCGTCAGCTaGGGGGTACTCGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARLVGVS*GVLVAE
Trigger: CTCGGCCACGAGTACCCCTCAGCTGACGCCAACCAA...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCTTGGTTGGCGTCAGCTaGGGGGTACTCGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLLVGVS*GVLVAE
Trigger: CTCGGCCACGAGTACCCCTCAGCTGACGCCAACCAA...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGACGGCTGGACCTCTaGAAAAGACCCTCCCGTCTT +
Preference number: 4 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWGRLDL*KRPSRL
Trigger: AAGACGGGAGGGTCTTTTTCAGAGGTCCAGCCGTCC...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGGGGCCTCGACTGGGCTaGCTGGCATCTCATACACGA +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGGPRLG*LASHTR
Trigger: TCGTGTATGAGATGCCAGTCAGCCCAGTCGAGGCCC...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
53% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGAAGGTAGAGTCCTGCTaGGTGTTCCAGCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWKVESC*VFQRLG
Trigger: CCCAAGGCGCTGGAACACTCAGCAGGACTCTACCTT...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAAGGTAGAGTCCTGCTaGGTGTTCCAGCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSKVESC*VFQRLG
Trigger: CCCAAGGCGCTGGAACACTCAGCAGGACTCTACCTT...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCTACACAGCCAGAGCTaGTGGCCACAGCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSLHSQS*WPQPLQ
Trigger: CTGGAGGGGCTGTGGCCATCAGCTCTGGCTGTGTAG...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGCTACACAGCCAGAGCTaGTGGCCACAGCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQLHSQS*WPQPLQ
Trigger: CTGGAGGGGCTGTGGCCATCAGCTCTGGCTGTGTAG...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGGCACACCCAACTGGCTaGGGAGAGGGAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKAHPTG*GEGAAD
Trigger: GTCTGCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGC...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGCACACCCAACTGGCTaGGGAGAGGGAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQAHPTG*GEGAAD
Trigger: GTCTGCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGC...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCGCATTCAGAGAGTCTTaGGGGAAGAGGGGAATGACC +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPAFRES*GKRGMT
Trigger: GGTCATTCCCCTCTTCCCTCAAGACTCTCTGAATGC...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GACCTCCAAGACAAAAGACAGTGGAGCAGCATTCAGAGAGTCTTGAGGGAAGAGCCACAGGATGCCAAGTaGAGAGGATCCGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: DLQDKRQWSSIQRVLREEPQDAK*RGSAKA
Trigger: GGCTTTGGCGGATCCTCTTCACTTGGCATCCTGTGG...CTCTTCCCTCAAGACTCTCTGAATGCTGCTCCACTGTCTTTTGTCTTGGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACGGAAGCGGGTGGACATaGCTGTCAATATCTCATCAG +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDGSGWT*LSISHQ
Trigger: CTGATGAGATATTGACAGTCATGTCCACCCGCTTCC...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AATGAGAGACAGCCAACTGTCACTCTGATGTTGCTACCAACCTCCCTCTCTCATAGTCCCACCGGCTCCTaGTCATGGAGTGAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: NERQPTVTLMLLPTSLSHSPTGS*SWSEPN
Trigger: GTTGGGCTCACTCCATGATCAGGAGCCGGTGGGACT...ATGAGAGAGGGAGGTTGGTAGCAACATCAGAGTGACAGTTGGCTGTCTCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCAAACCTCGGTGGACCTaGGCTAGGCCAACTTTATCT +
Preference number: 4 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSKPRWT*ARPTLS
Trigger: AGATAAAGTTGGCCTAGCTCAGGTCCACCGAGGTTT...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACAGGGTCGTGGCGAGCTaGTTTCACAGCAACCTCATC +
Preference number: 4 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHRVVAS*FHSNLI
Trigger: GATGAGGTTGCTGTGAAAGCAGCTCGCCACGACCCT...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTATCTTGGTGGTTCGGTaGCATTCCCGAGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCILVVR*HSRARP
Trigger: TGGCCTGGCTCGGGAATGGCACCGAACCACCAAGAT...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCCCGGATGACTTCGGGTaGCATCCAAGCATACGTCCC +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSPDDFG*HPSIRP
Trigger: GGGACGTATGCTTGGATGGCACCCGAAGTCATCCGG...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCATGGTAGGGGAGGCCTaGACCGTGAACTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSMVGEA*TVNLCW
Trigger: CCAGCACAAGTTCACGGTGCAGGCCTCCCCTACCAT...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCGAAGCAGCTGGCACTTaGCAGCTTCCAGCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPEAAGT*QLPASQ
Trigger: TTGACTTGCTGGAAGCTGGCAAGTGCCAGCTGCTTC...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGGAAGCAGCTGGCACTTaGCAGCTTCCAGCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEEAAGT*QLPASQ
Trigger: TTGACTTGCTGGAAGCTGGCAAGTGCCAGCTGCTTC...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCCCTGAGAAAGGGCTGTaGCCGCCAGCTCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLPEKGL*PPAPLI
Trigger: GATGAGGGGAGCTGGCGGGCACAGCCCTTTCTCAGG...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAACCTGAGAAAGGGCTGTaGCCGCCAGCTCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQPEKGL*PPAPLI
Trigger: GATGAGGGGAGCTGGCGGGCACAGCCCTTTCTCAGG...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGTGCAGATAGGCAGTaGCAGGTCTATCAAGCCCTA +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDSADRQ*QVYQAL
Trigger: TAGGGCTTGATAGACCTGGCACTGCCTATCTGCACT...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACAATCACTGTTGCCAGCTaGACATCCAGGCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTITVAS*TSRQQM
Trigger: CATTTGCTGCCTGGATGTGCAGCTGGCAACAGTGAT...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACCAGATGCTATATAAATaGGGCAGAAGGGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDQMLYK*GRRAWA
Trigger: GGCCCATGCCCTTCTGCCGCATTTATATAGCATCTG...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCAGGAATTAGGAAAGAATaGTTGTCAACACCAGATGCT +
Preference number: 4 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPGIRKE*LSTPDA
Trigger: AGCATCTGGTGTTGACAAGCATTCTTTCCTAATTCC...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACATTATCACCAGGTTCCTaGCAACACGGTTTCAACCCC +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTLSPGS*QHGFNP
Trigger: GGGGTTGAAACCGTGTTGGCAGGAACCTGGTGATAA...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGCCGCCAGAGAGCCACTaGCTCACTCAGGACCTGAGG +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRPPESH*LTQDLR
Trigger: CCTCAGGTCCTGAGTGAGGCAGTGGCTCTCTGGCGG...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTGTCCAGCTCCTGTGTaGTTCAAACCCCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPCPAPV*FKPLES
Trigger: TGACTCCAGGGGTTTGAAGCACACAGGAGCTGGACA...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCAATCACCTCCCTTCTTTaGTACAACTGTGTATCAAAG +
Preference number: 4 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPITSLL*YNCVSK
Trigger: CTTTGATACACAGTTGTAGCAAAGAAGGGAGGTGAT...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCTCTGGAGGGCTCCATaGAGCGGCCGATCCATAGGG +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSLWRAP*SGRSIG
Trigger: CCCTATGGATCGGCCGCTCCATGGAGCCCTCCAGAG...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTAAGATGCCCACCCGCTaGTTCAGCTGCCCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SMKGLRTQKSSYLEPSQIKMPTR*FSCPVH
Trigger: GTGGACCGGGCAGCTGAACCAGCGGGTGGGCATCTT...AATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCCTGCCGCACTCATCTTaGTGGTTCGGTGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSLPHSS*WFGAIP
Trigger: GGGAATGGCACCGAACCACCAAGATGAGTGCGGCAG...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGAGTGGAAGGAGTCCTTaGGCATTTCAAAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLSGRSP*AFQRNQ
Trigger: CTGGTTTCTTTGAAATGCCCAAGGACTCCTTCCACT...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCGGCCCTTCACCAGGTTaGGGGCACTGGACGACCACT +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLGPSPG*GHWTTT
Trigger: AGTGGTCGTCCAGTGCCCCCAACCTGGTGAAGGGCC...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTGGCCCTTCACCAGGTTaGGGGCACTGGACGACCACT +
Preference number: 4 (lower is better)
Translates to: SMKGLRTQKSSYLEPSQIGPSPG*GHWTTT
Trigger: AGTGGTCGTCCAGTGCCCCCAACCTGGTGAAGGGCC...AATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACACTCTCTCCACTCCCTaGGCCTTCACTGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHTLSTP*AFTVLI
Trigger: GATGAGGACAGTGAAGGCCCAGGGAGTGGAGAGAGT...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTACTCTCTCCACTCCCTaGGCCTTCACTGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPTLSTP*AFTVLI
Trigger: GATGAGGACAGTGAAGGCCCAGGGAGTGGAGAGAGT...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCCTCTCCACGAGGGAATaGGATACAGAGGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPLSTRE*DTEVGL
Trigger: CAGTCCTACCTCTGTATCCCATTCCCTCGTGGAGAG...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCGTGGCCGAGTTGACTaGGGTGGGCTCCTCATGGAT +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVRGRVD*GGLLMD
Trigger: ATCCATGAGGAGCCCACCCCAGTCAACTCGGCCACG...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTTCTCCTCCCGGGCTaGTGGCTCAGGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDLLLPG*WLRLLQ
Trigger: CTGGAGGAGCCTGAGCCACCAGCCCGGGAGGAGAAG...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGGCAGCAGGGAGCGTGTaGAGTTGCACTCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGAAGSV*SCTRRW
Trigger: CCATCTCCGAGTGCAACTCCACACGCTCCCTGCTGC...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTGGAGGGGCTCCTGCTaGCTAGGAGAGTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGWRGSC*LGESLA
Trigger: AGCCAGAGACTCTCCTAGCCAGCAGGAGCCCCTCCA...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCCCAGCGCCTTGGGGTTaGGGGGAAGACCACATTGGG +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLPAPWG*GEDHIG
Trigger: CCCAATGTGGTCTTCCCCCCAACCCCAAGGCGCTGG...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCAGCGCCTTGGGGTTaGGGGGAAGACCACATTGGG +
Preference number: 4 (lower is better)
Translates to: SMKGLRTQKSSYLEPSQIPAPWG*GEDHIG
Trigger: CCCAATGTGGTCTTCCCCCCAACCCCAAGGCGCTGG...AATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCCCAGCGCCTTGGGGTTaGGGGGAAGACCACATTGGG +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLPAPWG*GEDHIG
Trigger: CCCAATGTGGTCTTCCCCCCAACCCCAAGGCGCTGG...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTGAGGTGCTGCGGGCATaGCTGGGGGACACAAACCAC +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSEVLRA*LGDTNH
Trigger: GTGGTTTGTGTCCCCCAGCCATGCCCGCAGCACCTC...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGAGGTGCTGCGGGCATaGCTGGGGGACACAAACCAC +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKEVLRA*LGDTNH
Trigger: GTGGTTTGTGTCCCCCAGCCATGCCCGCAGCACCTC...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGAGGAGTCCAGGTTGCTaGGCGTCTCTGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGRSPGC*ASLCWS
Trigger: GCTCCAGCACAGAGACGCCCAGCAACCTGGACTCCT...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGCCACAGCCCCTCCAGTaGACACGGGTAGAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRPQPLQ*TRVERP
Trigger: GGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGCTGCGCACACCCAACTaGCTGAGGAGAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQLRTPN*LRRGSS
Trigger: GCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGCGCAG...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGACTGCGCACACCCAACTaGCTGAGGAGAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARLRTPN*LRRGSS
Trigger: GCTGCTCCCTCTCCTCAGCCAGTTGGGTGTGCGCAG...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGTGGATGGAGCAAGCCTaGACCAGTCGGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVWMEQA*TSRWLD
Trigger: GTCCAGCCACCGACTGGTCCAGGCTTGCTCCATCCA...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCGGTCAGTTTTCAGTATaGGGGACCTCAAGGTTATTG +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCGQFSV*GTSRLL
Trigger: CAATAACCTTGAGGTCCCCCATACTGAAAACTGACC...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCCTACTGCCACTCAAGTaGCTTCATCCACAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPLLPLK*LHPQLQ
Trigger: CTGGAGCTGTGGATGAAGCCACTTGAGTGGCAGTAG...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCGGGAGGTCTCCAATGTaGGGACCACAGAGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSGRSPM*GPQRQE
Trigger: CTCTTGCCTCTGTGGTCCCCACATTGGAGACCTCCC...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGATCTGAAACCTGGCCTTaGACTTCAGTGAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGSETWP*TSVSAG
Trigger: CCCTGCGCTCACTGAAGTCCAAGGCCAGGTTTCAGA...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGGCTTTGTCTGGGTTaGTGTCCAGGTGTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDRLCLG*CPGVKD
Trigger: ATCCTTCACACCTGGACACCAACCCAGACAAAGCCT...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 72 bp CATCAGCGGCTCCCTGGGCACCCTATAAATAGCACTTaGCCACATGCATTTACAGAAGGTACTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: HQRLPGHPINST*PHAFTEGTPAG
Trigger: GCCAGCAGGAGTACCTTCTGTAAATGCATGTGGCAAAGTGCTATTTATAGGGTGCCCAGGGAGCCGCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACCCTTTTCTTTGGCCCTaGGTTGGTCAAACATCTCCT +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDPFLWP*VGQTSP
Trigger: AGGAGATGTTTGACCAACTCAGGGCCAAAGAAAAGG...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCTGCGGTTGCCATCCTTaGGCTTCAGCCGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFCGCHP*ASAGSS
Trigger: GGAAGAGCCGGCTGAAGCTCAAGGATGGCAACCGCA...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCCTCGAAGGCGAGGAATaGTGGTGGGGCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLLEGEE*WWGLQE
Trigger: CTCCTGCAAGCCCCACCATCATTCCTCGCCTTCGAG...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTTACTCGTGGCCGAGTTaGCTGGGGTGGGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSYSWPS*LGWAPH
Trigger: ATGAGGAGCCCACCCCAGTCAACTCGGCCACGAGTA...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCCAGAACAAGGGAACCTaGGCGAATAGAAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPQNKGT*ANRKPL
Trigger: CAGTGGCTTTCTATTCGCTCAGGTTCCCTTGTTCTG...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCAGGCAAGAGAGTTCATaGAAAGTCAGGTCTAGATGT +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCRQESS*KVRSRC
Trigger: ACATCTAGACCTGACTTTTCATGAACTCTCTTGCCT...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAATCCAACACCAGCACCTaGGTGGTGAGCACCCACCCA +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKSNTST*VVSTHP
Trigger: TGGGTGGGTGCTCACCACTCAGGTGCTGGTGTTGGA...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCCAGCATGGCATCTaGACTGGAGGTAGAGATAAA +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDSQHGI*TGGRDK
Trigger: TTTATCTCTACCTCCAGTTCAGATGCCATGCTGGCT...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTGTGGGGAGTGCAGGATaGGTAGGGAGGGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCVGSAG*VGREIR
Trigger: TCTGATTTCCCTCCCTACTCATCCTGCACTCCCCAC...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACGCATTGAGACCAGGCTaGGATCAGCATTACACTGTA +
Preference number: 4 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDALRPG*DQHYTV
Trigger: TACAGTGTAATGCTGATCTCAGCCTGGTCTCAATGC...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGGCCGCCTATTGTTCATaGGCCTCCGCAGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKAAYCS*ASAELG
Trigger: TCCCAGCTCTGCGGAGGCGCATGAACAATAGGCGGC...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCCGGATGACTTCGGGTaGCATCCAAGCATACGTCCC +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVPDDFG*HPSIRP
Trigger: GGGACGTATGCTTGGATGGCACCCGAAGTCATCCGG...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACAAGCTCCACACATCACTaGCTTTGGAAAACATGGAGG +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTSSTHH*LWKTWR
Trigger: CCTCCATGTTTTCCAAAGGCAGTGATGTGTGGAGCT...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGCTCCTCCTCCCAGGTaGGAAGTTCCTTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPAPPPR*EVPFLW
Trigger: CCAAAGAAAAGGAACTTCGCACCTGGGAGGAGGAGC...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCCTGGTTCTTCTGCTaGAGTGCAGCCCGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKSWFFC*SAARVS
Trigger: GCTGACGCGGGCTGCACTGCAGCAGAAGAACCAGGA...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAATCCTCCTGGTTCTTCTaGTGCAGTGCAGCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKSSWFF*CSAARV
Trigger: GACGCGGGCTGCACTGCAGCAGAAGAACCAGGAGGA...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGATCCTCCTGGTTCTTCTaGTGCAGTGCAGCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARSSWFF*CSAARV
Trigger: GACGCGGGCTGCACTGCAGCAGAAGAACCAGGAGGA...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAATGCTGGAGGGGCTCCTaGTGGCTAGGAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKCWRGS*WLGESL
Trigger: CAGAGACTCTCCTAGCCAGCAGGAGCCCCTCCAGCA...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCCTGACTCTGCCCCTCTaGATCCAGGTCCAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLLTLPL*IQVQER
Trigger: ACGCTCCTGGACCTGGATGCAGAGGGGCAGAGTCAG...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGCTGACTCTGCCCCTCTaGATCCAGGTCCAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKLTLPL*IQVQER
Trigger: ACGCTCCTGGACCTGGATGCAGAGGGGCAGAGTCAG...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAATGAGGGGCTACCTGTaGACAGGCCTTGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGMRGYL*TGLGQF
Trigger: AAACTGACCAAGGCCTGTGCACAGGTAGCCCCTCAT...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCATGTGGCTCTTAGCATaGCAGGGAGTGAAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSMWLLA*QGVKKP
Trigger: AGGCTTTTTCACTCCCTGGCATGCTAAGAGCCACAT...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGTCTGAAGACTCACTGTaGAGGCACAGAGCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGSEDSL*RHRARE
Trigger: TTCCCTAGCTCTGTGCCTGCACAGTGAGTCTTCAGA...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCAGTGGCTTAGAAATGTaGTCAGAGGAAAAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCSGLEM*SEEKER
Trigger: CCTCTCTTTTTCCTCTGAGCACATTTCTAAGCCACT...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGTGGGGTGCTTCAGCATaGCGAAGAGCTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLWGASA*RRAWPL
Trigger: AAGAGGCCAAGCTCTTCGCCATGCTGAAGCACCCCA...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGTGCTTCAGCATaGCGAAGAGCTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCWGASA*RRAWPL
Trigger: AAGAGGCCAAGCTCTTCGCCATGCTGAAGCACCCCA...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGACACATCACTGCCTTTaGAAAACATGGAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPETHHCL*KTWRPG
Trigger: TCCGGGCCTCCATGTTTTCCAAAGGCAGTGATGTGT...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAACCAGACTCCTCTATaGTGGTTAGCTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGNQTPL*WLAGPG
Trigger: TCCTGGACCAGCTAACCACCATAGAGGAGTCTGGTT...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGTTCTCCTGGCACAGCTaGTGGATGATGATGTTGAGC +
Preference number: 4 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGFSWHS*WMMMLS
Trigger: GCTCAACATCATCATCCACCAGCTGTGCCAGGAGAA...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCACCGTGAACTTGTGCTaGAAATCAGAAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPTVNLC*KSEGRL
Trigger: CAGCCTCCCTTCTGATTTCCAGCACAAGTTCACGGT...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCTCACCTGGTGTCAACTaGATGGCTCGAAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSSPGVN*MARRRG
Trigger: TCCTCGCCTTCGAGCCATCCAGTTGACACCAGGTGA...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATAAGGCTGGTGAACCCTaGCAGGGCCGGGCTACTCCT +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDKAGEP*QGRATP
Trigger: AGGAGTAGCCCGGCCCTGCCAGGGTTCACCAGCCTT...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGCATGGATTCCATCACTaGAGGGGCCATCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLHGFHH*RGHRHP
Trigger: AGGATGGCGATGGCCCCTCCAGTGATGGAATCCATG...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGGAAAAGCTTTCGGGATaGGGGGCTGGTGCTCCGACG +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKEKLSG*GAGAPT
Trigger: CGTCGGAGCACCAGCCCCCCATCCCGAAAGCTTTTC...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCAGCAGGGAGCGTGTaGAGTTGCACTCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRAAGSV*SCTRRW
Trigger: CCATCTCCGAGTGCAACTCCACACGCTCCCTGCTGC...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGCTCGACTGGGCTGACTaGCATCTCATACACGACAAT +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPELDWAD*HLIHDN
Trigger: ATTGTCGTGTATGAGATGCCAGTCAGCCCAGTCGAG...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGAGGGGCCTCGACTaGGCTGACTGGCATCTCATA +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQGRGLD*ADWHLI
Trigger: TATGAGATGCCAGTCAGCCCAGTCGAGGCCCCTCCC...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGCACCTGGGTCTCGGCTaGGACTGGGGGTTTTCAACA +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGHLGLG*DWGFST
Trigger: TGTTGAAAACCCCCAGTCCCAGCCGAGACCCAGGTG...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGAGTAGTGGCATGGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACAGGGGGAAGACCACATTaGGGTCAGGGAGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: RVVAWRRHTRESFRGSSTGGRPH*GQGDGG
Trigger: TCCCCCGTCTCCCTGACCCCAATGTGGTCTTCCCCC...TGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCTGCTGCGGGCATGGCTaGGGGACACAAACCACCAAG +
Preference number: 4 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFCCGHG*GTQTTK
Trigger: CTTGGTGGTTTGTGTCCCCCAGCCATGCCCGCAGCA...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTTGCTGCGGGCATGGCTaGGGGACACAAACCACCAAG +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSCCGHG*GTQTTK
Trigger: CTTGGTGGTTTGTGTCCCCCAGCCATGCCCGCAGCA...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATGAGGTGCTGCGGGCATaGCTGGGGGACACAAACCAC +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDEVLRA*LGDTNH
Trigger: GTGGTTTGTGTCCCCCAGCCATGCCCGCAGCACCTC...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAAGGAGTCCAGGTTGCTaGGCGTCTCTGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQRSPGC*ASLCWS
Trigger: GCTCCAGCACAGAGACGCCCAGCAACCTGGACTCCT...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTGGAGACCCTCTGAAGTaGCCCTGTTTCCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCGDPLK*PCFHPF
Trigger: GAAGGGATGGAAACAGGGCCACTTCAGAGGGTCTCC...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAGAAGACTGTGGAGGGTaGGGGACATGCATGCACCCC +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISAREDCGG*GTCMHP
Trigger: GGGGTGCATGCATGTCCCCCACCCTCCACAGTCTTC...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGTGGGCACCACCCAACTaGCTGCCAGCAAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRWAPPN*LPARPS
Trigger: AGATGGCCTTGCTGGCAGCCAGTTGGGTGGTGCCCA...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554146.1
ENST00000555993.6
CDS-3UTR CCA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACGACTACTCTGACCTCTaGGTTCAGAATGCCCAGACG +
Preference number: 4 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHDYSDL*VQNAQT
Trigger: CGTCTGGGCATTCTGAACCCAGAGGTCAGAGTAGTC...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CCCAAAGCAAAGTGGGAATTCAAGGACACGGGGTCAGGACACATGAACAAGACAGGTCCAGGATATTCGTaGAAGATGGTCGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PKAKWEFKDTGSGHMNKTGPGYS*KMVVSG
Trigger: CCCACTCACGACCATCTTTCACGAATATCCTGGACC...TGTCTTGTTCATGTGTCCTGACCCCGTGTCCTTGAATTCCCACTTTGCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGCCTTTTCTTTGGCCCTaGGTTGGTCAAACATCTCCT +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEPFLWP*VGQTSP
Trigger: AGGAGATGTTTGACCAACTCAGGGCCAAAGAAAAGG...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCGAAGGCGAGGAATaGTGGTGGGGCTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDLEGEE*WWGLQE
Trigger: CTCCTGCAAGCCCCACCATCATTCCTCGCCTTCGAG...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCTCCTTTGGGACGACTaGGCTCCTGCCCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSLLWDD*APAPGF
Trigger: AAAACCTGGGGCAGGAGCTCAGTCGTCCCAAAGGAG...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAACTCCTTTGGGACGACTaGGCTCCTGCCCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKLLWDD*APAPGF
Trigger: AAAACCTGGGGCAGGAGCTCAGTCGTCCCAAAGGAG...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGCTCCTTTGGGACGACTaGGCTCCTGCCCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKLLWDD*APAPGF
Trigger: AAAACCTGGGGCAGGAGCTCAGTCGTCCCAAAGGAG...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCCTCCTTTGGGACGACTaGGCTCCTGCCCCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLLLWDD*APAPGF
Trigger: AAAACCTGGGGCAGGAGCTCAGTCGTCCCAAAGGAG...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTGGGCTCCTCCTTCTTaGAAAGCTTTCGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGWAPPS*KAFGMG
Trigger: CCCCATCCCGAAAGCTTTTCAAGAAGGAGGAGCCCA...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCGCTCTACTCGGACATTaGCCAGGGGGTTGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLALLGH*PGGCGY
Trigger: GTACCCACAACCCCCTGGTCAATGTCCGAGTAGAGC...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGAAGGTAGAGTCCTGCTaGGTGTTCCAGCGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQKVESC*VFQRLG
Trigger: CCCAAGGCGCTGGAACACTCAGCAGGACTCTACCTT...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTGACAAAGGGACCCTATaGCAGCTCTGCGCACACCCA +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSDKGTL*QLCAHP
Trigger: TGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTC...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGACAAAGGGACCCTATaGCAGCTCTGCGCACACCCA +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQDKGTL*QLCAHP
Trigger: TGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTC...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCCAAAGGTTTCATATaGTCCACAGCAACGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSSKGFI*STATLP
Trigger: AGGAAGCGTTGCTGTGGATCATATGAAACCTTTGGA...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR TCA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACGTCTTCCTGCTAGCATaGAAGGGCTTAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHVFLLA*KGLGHR
Trigger: TCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGAC...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACGCAGCACACTATTTCTaGAACCTGGCCTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHAAHYF*NLALDF
Trigger: GAAGTCCAAGGCCAGGTTTCAGAAATAGTGTGCTGC...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCCCAGTCACAGGCAGATaGCAGGTGAGCCAAGGACAC +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLPVTGR*QVSQGH
Trigger: GTGTCCTTGGCTCACCTGTCATCTGCCTGTGACTGG...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCATCAAGGATGTCAGCTaGGACGTGCGAGGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSIKDVS*DVRGFK
Trigger: CTTGAACCCTCGCACGTCTCAGCTGACATCCTTGAT...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAAGTTGCTGGGGAAGATaGCCACCCGCTGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQSCWGR*PPAGSA
Trigger: AGCTGAACCAGCGGGTGGGCATCTTCCCCAGCAACT...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAAGTTGCTGGGGAAGATaGCCACCCGCTGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKSCWGR*PPAGSA
Trigger: AGCTGAACCAGCGGGTGGGCATCTTCCCCAGCAACT...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCCAAAGCAAAGTGGGAATTCAAGGACACGGGGTCAGGACACATGAACAAGACAATCCCTCTGGCAATCTaGACAGCCCAATTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PKAKWEFKDTGSGHMNKTIPLAI*TAQFTR
Trigger: CCTGGTGAATTGGGCTGTGCAGATTGCCAGAGGGAT...TGTCTTGTTCATGTGTCCTGACCCCGTGTCCTTGAATTCCCACTTTGCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAATCTTGGTGGTTCGGTaGCATTCCCGAGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARILVVR*HSRARP
Trigger: TGGCCTGGCTCGGGAATGGCACCGAACCACCAAGAT...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCCAAGCATACGTCCCTaGCGCACTCATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVPSIRP*RTHLGG
Trigger: ACCACCAAGATGAGTGCGGCAGGGACGTATGCTTGG...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAACCGGATGACTTCGGGTaGCATCCAAGCATACGTCCC +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQPDDFG*HPSIRP
Trigger: GGGACGTATGCTTGGATGGCACCCGAAGTCATCCGG...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGCTCCTCCTCCCAGGTaGGAAGTTCCTTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GLGHRKAPISNQARFPFLAPPPR*EVPFLW
Trigger: CCAAAGAAAAGGAACTTCGCACCTGGGAGGAGGAGC...CAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATTCCTCCTGGTTCTTCTaGTGCAGTGCAGCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDSSWFF*CSAARV
Trigger: GACGCGGGCTGCACTGCAGCAGAAGAACCAGGAGGA...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGAATGATGGTGGGGCTTaGAGGAGGACTGGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRNDGGA*RRTGAA
Trigger: AGCCGCTCCAGTCCTCCTGCAAGCCCCACCATCATT...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGAATGATGGTGGGGCTTaGAGGAGGACTGGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKNDGGA*RRTGAA
Trigger: AGCCGCTCCAGTCCTCCTGCAAGCCCCACCATCATT...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTAATGATGGTGGGGCTTaGAGGAGGACTGGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SMKGLRTQKSSYLEPSQINDGGA*RRTGAA
Trigger: AGCCGCTCCAGTCCTCCTGCAAGCCCCACCATCATT...AATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTCCTGCCCCAGGTTTTaGTGCTTTCACCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCSCPRF*CFHLVS
Trigger: TGACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGA...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCGAAGCAGCTGGCACTTaGCAGCTTCCAGCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSEAAGT*QLPASQ
Trigger: TTGACTTGCTGGAAGCTGGCAAGTGCCAGCTGCTTC...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGGGGAGCGTGTGGAGTTaGACTCGGAGATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKGSVWS*TRRWRR
Trigger: TCTCCTCCATCTCCGAGTGCAACTCCACACGCTCCC...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATTGCTGGAGGGGCTCCTaGTGGCTAGGAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDCWRGS*WLGESL
Trigger: CAGAGACTCTCCTAGCCAGCAGGAGCCCCTCCAGCA...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGTGTTCAGTTCCGCTCTaGACAGCGGCACGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQCSVPL*TAARCC
Trigger: ACAGCACCGTGCCGCTGTGCAGAGCGGAACTGAACA...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTTGTTCAGTTCCGCTCTaGACAGCGGCACGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSCSVPL*TAARCC
Trigger: ACAGCACCGTGCCGCTGTGCAGAGCGGAACTGAACA...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCCCATCTCCAACCTTaGCCCACTGAGAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRAHLQP*PTERVQ
Trigger: CTGCACTCTCTCAGTGGGGCAAGGTTGGAGATGGGC...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCAGCAACAGGGCACCTaGAGGCTGGAAACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSQQQGT*RLETGE
Trigger: CTCTCCTGTTTCCAGCCTGCAGGTGCCCTGTTGCTG...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGGTTTCGGTGGGGAGTaGAGGATGAGTAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRGFGGE*RMSREG
Trigger: TCCCTCCCTACTCATCCTGCACTCCCCACCGAAACC...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCCCATTGAACCAAGCCTaGTTGGCATCCCTAGTTAAC +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPPLNQA*LASLVN
Trigger: GTTAACTAGGGATGCCAAGCAGGCTTGGTTCAATGG...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCACACCTGCGAGTCCTTaGACAGCACCTCCACCACGT +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLTPASP*TAPPPR
Trigger: ACGTGGTGGAGGTGCTGTCCAAGGACTCGCAGGTGT...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACGACTTAAGGTCGCGGTaGATGATGGGAACAATTGCC +
Preference number: 4 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHDLRSR*MMGTIA
Trigger: GGCAATTGTTCCCATCATCCACCGCGACCTTAAGTC...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGCCGCACTCATCTTGGTaGTTCGGTGCCATTCCCGAG +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRPHSSW*FGAIPE
Trigger: CTCGGGAATGGCACCGAACCACCAAGATGAGTGCGG...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGCTGCCGCACTCATCTTaGTGGTTCGGTGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKLPHSS*WFGAIP
Trigger: GGGAATGGCACCGAACCACCAAGATGAGTGCGGCAG...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTGGGCGAGTTTGTTCATaGCCACTCCATAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCGRVCS*PLHKRL
Trigger: CAGTCGCTTATGGAGTGGCCATGAACAAACTCGCCC...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTAAAGATGGTCGTGAGTaGGGATCAGGATTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPKDGRE*GSGFQQ
Trigger: CTGCTGGAATCCTGATCCCCACTCACGACCATCTTT...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAATCTATGGTGGTTAGCTaGTCCAGGATATTCGTGAAA +
Preference number: 4 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQSMVVS*SRIFVK
Trigger: TTTCACGAATATCCTGGACCAGCTAACCACCATAGA...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAACCGTCCCTTCTTCTTTaGGGCCCTCTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQPSLLL*GPLLLL
Trigger: GAGGAGGAGAAGAGGGCCCCAAAGAAGAAGGGACGG...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGCCGTCCCTTCTTCTTTaGGGCCCTCTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKPSLLL*GPLLLL
Trigger: GAGGAGGAGAAGAGGGCCCCAAAGAAGAAGGGACGG...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCCCGTCCCTTCTTCTTTaGGGCCCTCTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLPSLLL*GPLLLL
Trigger: GAGGAGGAGAAGAGGGCCCCAAAGAAGAAGGGACGG...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAAGTTGCACTCGGAGATaGAGGAGAGGGAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQSCTRR*RRGRAA
Trigger: CGCTGCTCTCCCTCTCCTCCATCTCCGAGTGCAACT...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGAGTTGCACTCGGAGATaGAGGAGAGGGAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKSCTRR*RRGRAA
Trigger: CGCTGCTCTCCCTCTCCTCCATCTCCGAGTGCAACT...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTAGTTGCACTCGGAGATaGAGGAGAGGGAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SMKGLRTQKSSYLEPSQISCTRR*RRGRAA
Trigger: CGCTGCTCTCCCTCTCCTCCATCTCCGAGTGCAACT...AATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATGCAGCAGGGAGCGTGTaGAGTTGCACTCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDAAGSV*SCTRRW
Trigger: CCATCTCCGAGTGCAACTCCACACGCTCCCTGCTGC...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTCTCGACTGGGCTGACTaGCATCTCATACACGACAAT +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPLDWAD*HLIHDN
Trigger: ATTGTCGTGTATGAGATGCCAGTCAGCCCAGTCGAG...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAATTCCTGCTCCAGGACTaGGGCTCAACCCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKFLLQD*GSTHCW
Trigger: CCAGCAATGGGTTGAGCCCCAGTCCTGGAGCAGGAA...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGTTCCTGCTCCAGGACTaGGGCTCAACCCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRFLLQD*GSTHCW
Trigger: CCAGCAATGGGTTGAGCCCCAGTCCTGGAGCAGGAA...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGCACCTGGGTCTCGGCTaGGACTGGGGGTTTTCAACA +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQHLGLG*DWGFST
Trigger: TGTTGAAAACCCCCAGTCCCAGCCGAGACCCAGGTG...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGAGCAGCAGACAGATTTaGCTGAGTGACTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWSSRQI*LSDSAG
Trigger: CCCTGCAGAGTCACTCAGCCAAATCTGTCTGCTGCT...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGTCCAACACTGGTGTTTaGGAAGCTGAACTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLGHRKAPISNQARFPFLSNTGV*EAELGA
Trigger: AGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGA...CAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAGCTTCCTCTAGGAGCTaGCAAGGAGCTATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGASSRS*QGAMVF
Trigger: AAACACCATAGCTCCTTGCCAGCTCCTAGAGGAAGC...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGCCCAAGACGGGAAATaGATGAGGAAGCGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQAQDGK*MRKRVD
Trigger: GTCCACCCGCTTCCTCATCCATTTCCCGTCTTGGGC...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 72 bp ACGGCCTTCAGTGGTATTGGGAGAAGAGCTACAGAATaGACATGTCCAGCTCCTGTGTGCTTCAAACCCCTG +
Preference number: 4 (lower is better)
Translates to: TAFSGIGRRATE*TCPAPVCFKPL
Trigger: CAGGGGTTTGAAGCACACAGGAGCTGGACATGTCAATTCTGTAGCTCTTCTCCCAATACCACTGAAGGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCACGAGCAAACTCCATaGCCAAGCAGAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SMKGLRTQKSSYLEPSQIHEQTP*PSRGWA
Trigger: AGCCCAACCTCTGCTTGGTCATGGAGTTTGCTCGTG...AATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGCCAGGCCAAAATCAGTaGTCTTCAGAATCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEPGQNQ*SSESCC
Trigger: GCAACAAGATTCTGAAGATCACTGATTTTGGCCTGG...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGCGTGAAAGATGGTCGTaGGTGGGGATCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGRERWS*VGIRIP
Trigger: TGGAATCCTGATCCCCACTCACGACCATCTTTCACG...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGGGTCCAGGATATTCGTaGAAGATGGTCGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGGPGYS*KMVVSG
Trigger: CCCACTCACGACCATCTTTCACGAATATCCTGGACC...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAATCAGCCGGCTCTTCCTaGACTTGCCCTTGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQSAGSS*TCPCVS
Trigger: AGAAACGCAAGGGCAAGTTCAGGAAGAGCCGGCTGA...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCAGCCGGCTCTTCCTaGACTTGCCCTTGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKSAGSS*TCPCVS
Trigger: AGAAACGCAAGGGCAAGTTCAGGAAGAGCCGGCTGA...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGTGGGCTCCTCCTTCTTaGAAAGCTTTCGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQWAPPS*KAFGMG
Trigger: CCCCATCCCGAAAGCTTTTCAAGAAGGAGGAGCCCA...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTTGGGCTCCTCCTTCTTaGAAAGCTTTCGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSWAPPS*KAFGMG
Trigger: CCCCATCCCGAAAGCTTTTCAAGAAGGAGGAGCCCA...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTGGGCTCCTCCTTCTTaGAAAGCTTTCGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKWAPPS*KAFGMG
Trigger: CCCCATCCCGAAAGCTTTTCAAGAAGGAGGAGCCCA...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATGCTCTACTCGGACATTaGCCAGGGGGTTGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDALLGH*PGGCGY
Trigger: GTACCCACAACCCCCTGGTCAATGTCCGAGTAGAGC...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AGAGTAGTGGCATGGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACAGCTCTACTCGGACATTaGCCAGGGGGTTGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: RVVAWRRHTRESFRGSSTALLGH*PGGCGY
Trigger: GTACCCACAACCCCCTGGTCAATGTCCGAGTAGAGC...TGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCGCAGACAGATTTGGCTaGGTGACTCTGCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLADRFG*VTLQGH
Trigger: GTGACCCTGCAGAGTCACTCAGCCAAATCTGTCTGC...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGCAGACAGATTTGGCTaGGTGACTCTGCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQADRFG*VTLQGH
Trigger: GTGACCCTGCAGAGTCACTCAGCCAAATCTGTCTGC...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AGAGTAGTGGCATGGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACAGACAAAGGGACCCTATaGCAGCTCTGCGCACACCCA +
Preference number: 4 (lower is better)
Translates to: RVVAWRRHTRESFRGSSTDKGTL*QLCAHP
Trigger: TGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTC...TGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTGCTTTCTCACGTCTCTaGGGGGATCCTTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: SMKGLRTQKSSYLEPSQIAFSRL*GDPSSP
Trigger: GGGAGATGAAGGATCCCCTCAGAGACGTGAGAAAGC...AATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTTTCTCACGTCTCTaGGGGGATCCTTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRAFSRL*GDPSSP
Trigger: GGGAGATGAAGGATCCCCTCAGAGACGTGAGAAAGC...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCCTCCAGGGATTAGAGTaGAGACCAAAGGAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSLQGLE*RPKEGS
Trigger: ACTCCCTTCCTTTGGTCTTCACTCTAATCCCTGGAG...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCCAACCTGTTCAGTTCTaGGCCCAGTGGCCTCACTCA +
Preference number: 4 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFQPVQF*AQWPHS
Trigger: TGAGTGAGGCCACTGGGCTCAGAACTGAACAGGTTG...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACTTCATCCTGTATAGATaGAAGAAGCTTCCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDFILYR*KKLPLG
Trigger: TCCTAGAGGAAGCTTCTTTCATCTATACAGGATGAA...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGGGTATAGAGTGGAGTaGGGCCCTCACCTTGGGTTA +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQGYRVE*GPHLGL
Trigger: TAACCCAAGGTGAGGGCCTCACTCCACTCTATACCC...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCCACTTTAGTCCCTTCTaGAATCTGGACGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPHFSPF*NLDERM
Trigger: CATTCTCTCGTCCAGATTTCAGAAGGGACTAAAGTG...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCTGCTTCCTAGCTGTGTaGCCCTGGGCAAATTACAGA +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSCFLAV*PWANYR
Trigger: TCTGTAATTTGCCCAGGGTCACACAGCTAGGAAGCA...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGCGGGGTCAGGACACATaGACAAGACACTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQRGQDT*TRHWSR
Trigger: TCTGCTCCAGTGTCTTGTTCATGTGTCCTGACCCCG...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAAGGGTCGTGGCGAGCTaGTTTCACAGCAACCTCATC +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKRVVAS*FHSNLI
Trigger: GATGAGGTTGCTGTGAAAGCAGCTCGCCACGACCCT...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCCAAGCATACGTCCCTaGCGCACTCATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSPSIRP*RTHLGG
Trigger: ACCACCAAGATGAGTGCGGCAGGGACGTATGCTTGG...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAAGCTCCACACATCACTaGCTTTGGAAAACATGGAGG +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGSSTHH*LWKTWR
Trigger: CCTCCATGTTTTCCAAAGGCAGTGATGTGTGGAGCT...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGGCTCCTCCTCCCAGGTaGGAAGTTCCTTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGAPPPR*EVPFLW
Trigger: CCAAAGAAAAGGAACTTCGCACCTGGGAGGAGGAGC...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGAGTAGTGGCATGGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACAAATGATGGTGGGGCTTaGAGGAGGACTGGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: RVVAWRRHTRESFRGSSTNDGGA*RRTGAA
Trigger: AGCCGCTCCAGTCCTCCTGCAAGCCCCACCATCATT...TGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCTGCCCCAGGTTTTaGTGCTTTCACCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGSCPRF*CFHLVS
Trigger: TGACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGA...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGGACGACTGAGCTCCTaGCCCAGGTTTTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQGRLSS*PRFCCF
Trigger: AAAGCAGCAAAACCTGGGGCAGGAGCTCAGTCGTCC...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGACGACTGAGCTCCTaGCCCAGGTTTTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKGRLSS*PRFCCF
Trigger: AAAGCAGCAAAACCTGGGGCAGGAGCTCAGTCGTCC...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTGCACTGGACGACCACTaGTTATATCCATCTACCAGG +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCALDDH*LYPSTR
Trigger: CCTGGTAGATGGATATAAGCAGTGGTCGTCCAGTGC...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGCACTGGACGACCACTaGTTATATCCATCTACCAGG +
Preference number: 4 (lower is better)
Translates to: GLGHRKAPISNQARFPFLALDDH*LYPSTR
Trigger: CCTGGTAGATGGATATAAGCAGTGGTCGTCCAGTGC...CAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCCCAATTCATCACTGTTaGCAGCTGCACATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSPIHHC*QLHIQA
Trigger: TGCCTGGATGTGCAGCTGGCAACAGTGATGAATTGG...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGGAGAGGCCTGTCTGTaGACCCCTGGAATGGTATTC +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQGEACL*TPGMVF
Trigger: GAATACCATTCCAGGGGTGCACAGACAGGCCTCTCC...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGACACTCCTATTTAAATaGGAGCACCGCCAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLGHRKAPISNQARFPFLTLLFK*EHRQRA
Trigger: GGCTCTCTGGCGGTGCTCGCATTTAAATAGGAGTGT...CAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTTCCTCATCAGGGTCGTaGCGAGCTGCTTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSSSSGS*RAAFTA
Trigger: TGCTGTGAAAGCAGCTCGCCACGACCCTGATGAGGA...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGTGGGGTGCTTCAGCATaGCGAAGAGCTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRWGASA*RRAWPL
Trigger: AAGAGGCCAAGCTCTTCGCCATGCTGAAGCACCCCA...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTATTCACCAGGATGTCTaGGGGAATCCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPIHQDV*GNPFPR
Trigger: TCTGGGAAAAGGATTCCCCCAGACATCCTGGTGAAT...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCCGCACTCATCTTGGTaGTTCGGTGCCATTCCCGAG +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDPHSSW*FGAIPE
Trigger: CTCGGGAATGGCACCGAACCACCAAGATGAGTGCGG...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGAACCAGACTCCTCTATaGTGGTTAGCTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWNQTPL*WLAGPG
Trigger: TCCTGGACCAGCTAACCACCATAGAGGAGTCTGGTT...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCAGTGGAAGGAGTCCTTaGGCATTTCAAAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPSGRSP*AFQRNQ
Trigger: CTGGTTTCTTTGAAATGCCCAAGGACTCCTTCCACT...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAGTGGAAGGAGTCCTTaGGCATTTCAAAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPESGRSP*AFQRNQ
Trigger: CTGGTTTCTTTGAAATGCCCAAGGACTCCTTCCACT...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTACCGTGAACTTGTGCTaGAAATCAGAAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCTVNLC*KSEGRL
Trigger: CAGCCTCCCTTCTGATTTCCAGCACAAGTTCACGGT...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCTCACCTGGTGTCAACTaGATGGCTCGAAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLSPGVN*MARRRG
Trigger: TCCTCGCCTTCGAGCCATCCAGTTGACACCAGGTGA...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTTCACCTGGTGTCAACTaGATGGCTCGAAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSSPGVN*MARRRG
Trigger: TCCTCGCCTTCGAGCCATCCAGTTGACACCAGGTGA...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGTTTGCTGCTTTCACCTaGTGTCAACTGGATGGCTCG +
Preference number: 4 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWFAAFT*CQLDGS
Trigger: CGAGCCATCCAGTTGACACCAGGTGAAAGCAGCAAA...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTACTCTCTCCACTCCCTaGGCCTTCACTGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSTLSTP*AFTVLI
Trigger: GATGAGGACAGTGAAGGCCCAGGGAGTGGAGAGAGT...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCACTCTCTCCACTCCCTaGGCCTTCACTGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFTLSTP*AFTVLI
Trigger: GATGAGGACAGTGAAGGCCCAGGGAGTGGAGAGAGT...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGCTCTCCACGAGGGAATaGGATACAGAGGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGLSTRE*DTEVGL
Trigger: CAGTCCTACCTCTGTATCCCATTCCCTCGTGGAGAG...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCATGGATTCCATCACTaGAGGGGCCATCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSHGFHH*RGHRHP
Trigger: AGGATGGCGATGGCCCCTCCAGTGATGGAATCCATG...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTTCCGACGAGGACGGCTaGACCTCTGAAAAAGACCCT +
Preference number: 4 (lower is better)
Translates to: SMKGLRTQKSSYLEPSQISDEDG*TSEKDP
Trigger: AGGGTCTTTTTCAGAGGTCCAGCCGTCCTCGTCGGA...AATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGTCCGACGAGGACGGCTaGACCTCTGAAAAAGACCCT +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRSDEDG*TSEKDP
Trigger: AGGGTCTTTTTCAGAGGTCCAGCCGTCCTCGTCGGA...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTTCCGACGAGGACGGCTaGACCTCTGAAAAAGACCCT +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSSDEDG*TSEKDP
Trigger: AGGGTCTTTTTCAGAGGTCCAGCCGTCCTCGTCGGA...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGAGTAGTGGCATGGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACAAGTTGCACTCGGAGATaGAGGAGAGGGAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: RVVAWRRHTRESFRGSSTSCTRR*RRGRAA
Trigger: CGCTGCTCTCCCTCTCCTCCATCTCCGAGTGCAACT...TGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGTTGACCAGGGGGTTGTaGGTACATGGACTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRLTRGL*VHGLRG
Trigger: TCCCCTGAGTCCATGTACCCACAACCCCCTGGTCAA...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAATTGACCAGGGGGTTGTaGGTACATGGACTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKLTRGL*VHGLRG
Trigger: TCCCCTGAGTCCATGTACCCACAACCCCCTGGTCAA...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATTTCCTGCTCCAGGACTaGGGCTCAACCCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDFLLQD*GSTHCW
Trigger: CCAGCAATGGGTTGAGCCCCAGTCCTGGAGCAGGAA...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGGTCTCGGCTGGGACTaGGGGTTTTCAACATTCCTG +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQGLGWD*GFSTFL
Trigger: CAGGAATGTTGAAAACCCCCAGTCCCAGCCGAGACC...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTGGTCTCGGCTGGGACTaGGGGTTTTCAACATTCCTG +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSGLGWD*GFSTFL
Trigger: CAGGAATGTTGAAAACCCCCAGTCCCAGCCGAGACC...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGGTCTCGGCTGGGACTaGGGGTTTTCAACATTCCTG +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLGLGWD*GFSTFL
Trigger: CAGGAATGTTGAAAACCCCCAGTCCCAGCCGAGACC...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGAGACCCTCTGAAGTaGCCCTGTTTCCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQGDPLK*PCFHPF
Trigger: GAAGGGATGGAAACAGGGCCACTTCAGAGGGTCTCC...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCATAGGCAGCATGGTTTaGAGGGCCACAAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLIGSMV*RATRGP
Trigger: TGGCCCTCTTGTGGCCCTCCAAACCATGCTGCCTAT...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GACCTCCAAGACAAAAGACAGTGGAGCAGCATTCAGAGAGTCTTGAGGGAAGAGCCAAGGGAAGCAATCTaGCAAGGCTGCAGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: DLQDKRQWSSIQRVLREEPREAI*QGCSFC
Trigger: ACAGAAACTGCAGCCTTGCCAGATTGCTTCCCTTGG...CTCTTCCCTCAAGACTCTCTGAATGCTGCTCCACTGTCTTTTGTCTTGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCTCTCTATGGTCTGGCTaGTGTCCTCATCAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLSLWSG*CPHQGR
Trigger: ACGACCCTGATGAGGACATCAGCCAGACCATAGAGA...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTCCAGCAGTCTTCCATaGGTTTGGCAAAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCSSSLP*VWQKVL
Trigger: CAGAACCTTTTGCCAAACTCATGGAAGACTGCTGGA...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGACGTGAAAGATGGTCGTaGGTGGGGATCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARRERWS*VGIRIP
Trigger: TGGAATCCTGATCCCCACTCACGACCATCTTTCACG...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAACGTGAAAGATGGTCGTaGGTGGGGATCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKRERWS*VGIRIP
Trigger: TGGAATCCTGATCCCCACTCACGACCATCTTTCACG...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCCGTGAAAGATGGTCGTaGGTGGGGATCAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLRERWS*VGIRIP
Trigger: TGGAATCCTGATCCCCACTCACGACCATCTTTCACG...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTGGTCCAGGATATTCGTaGAAGATGGTCGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSGPGYS*KMVVSG
Trigger: CCCACTCACGACCATCTTTCACGAATATCCTGGACC...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACACAAGGACATACTTCATaGACCTCTTCATTGCAACTT +
Preference number: 4 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTQGHTS*TSSLQL
Trigger: AAGTTGCAATGAAGAGGTTCATGAAGTATGTCCTTG...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTCTAGGGCATTGCGGTaGTATCTACTAACCAAACAT +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPSRALR*YLLTKH
Trigger: ATGTTTGGTTAGTAGATATCACCGCAATGCCCTAGA...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGGATGACCCCAAGAAATaGGAGACAGCCAACTGTCAC +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVDDPKK*ETANCH
Trigger: GTGACAGTTGGCTGTCTCTCATTTCTTGGGGTCATC...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCTTCCAGGAACTGGGATaGTCCCAGGCTCTAAACAAA +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSFQELG*SQALNK
Trigger: TTTGTTTAGAGCCTGGGATCATCCCAGTTCCTGGAA...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCGCTTCTGAAGTCCAGTaGGGGGAAAAGATATGTGCA +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSASEVQ*GEKICA
Trigger: TGCACATATCTTTTCCCCTCACTGGACTTCAGAAGC...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTCCAAGCTCAAGAGACTaGGAGAAAAGTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCPSSRD*EKSEEK
Trigger: CTTCTCCTCACTTTTCTCTCAGTCTCTTGAGCTTGG...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAAGAGGTTTAGCCATTaGACCAAGCCTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSKRFSH*TKPAWH
Trigger: ATGCCAAGCAGGCTTGGTTCAATGGCTAAACCTCTT...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGTCTTCAGAATCTTGTTaGTCAGGTCTCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPESSESC*SGLHSP
Trigger: TGGAGAATGGAGACCTGAGCAACAAGATTCTGAAGA...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAGCTCCACACATCACTaGCTTTGGAAAACATGGAGG +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSSSTHH*LWKTWR
Trigger: CCTCCATGTTTTCCAAAGGCAGTGATGTGTGGAGCT...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCTGCTAAGCCATCAATaGCTCGAAAGGGCACCTCAC +
Preference number: 4 (lower is better)
Translates to: SMKGLRTQKSSYLEPSQILLSHQ*LERAPH
Trigger: GTGAGGTGCCCTTTCGAGGCATTGATGGCTTAGCAG...AATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGCTGCTAAGCCATCAATaGCTCGAAAGGGCACCTCAC +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQLLSHQ*LERAPH
Trigger: GTGAGGTGCCCTTTCGAGGCATTGATGGCTTAGCAG...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCTGTTTCCAGTTGTCCTaGAGGCAGTGGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLCFQLS*RQWKES
Trigger: GGACTCCTTCCACTGCCTGCAGGACAACTGGAAACA...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGTGTTTCCAGTTGTCCTaGAGGCAGTGGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQCFQLS*RQWKES
Trigger: GGACTCCTTCCACTGCCTGCAGGACAACTGGAAACA...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGATGTTTCCAGTTGTCCTaGAGGCAGTGGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARCFQLS*RQWKES
Trigger: GGACTCCTTCCACTGCCTGCAGGACAACTGGAAACA...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGCTCCTCCTCCCAGGTaGGAAGTTCCTTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKAPPPR*EVPFLW
Trigger: CCAAAGAAAAGGAACTTCGCACCTGGGAGGAGGAGC...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGGCTCCTCCTCCCAGGTaGGAAGTTCCTTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKAPPPR*EVPFLW
Trigger: CCAAAGAAAAGGAACTTCGCACCTGGGAGGAGGAGC...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCCTGCCCCAGGTTTTaGTGCTTTCACCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKSCPRF*CFHLVS
Trigger: TGACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGA...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGGCACTGGACGACCACTaGTTATATCCATCTACCAGG +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVALDDH*LYPSTR
Trigger: CCTGGTAGATGGATATAAGCAGTGGTCGTCCAGTGC...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGGCACTGGACGACCACTaGTTATATCCATCTACCAGG +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGALDDH*LYPSTR
Trigger: CCTGGTAGATGGATATAAGCAGTGGTCGTCCAGTGC...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGCAGCTGGCACTTaGCAGCTTCCAGCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQEAAGT*QLPASQ
Trigger: TTGACTTGCTGGAAGCTGGCAAGTGCCAGCTGCTTC...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCGTCAGGGTTGGCCTCTaGTATCCTTCCTACTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFVRVGL*YPSYSA
Trigger: AGCTGAGTAGGAAGGATAGCAGAGGCCAACCCTGAC...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GACCTCCAAGACAAAAGACAGTGGAGCAGCATTCAGAGAGTCTTGAGGGAAGAGCATTGTTGCTATTACTaGTACCACCAGACCCTAGGG +
Preference number: 4 (lower is better)
Translates to: DLQDKRQWSSIQRVLREEHCCYY*YHQTLG
Trigger: CCCTAGGGTCTGGTGGTAGCAGTAATAGCAACAATG...CTCTTCCCTCAAGACTCTCTGAATGCTGCTCCACTGTCTTTTGTCTTGGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp CCAGGTGGCCATATGGTATTCTGCTTCATAGCTGTTCTAGGGCATTGCGGTGATAAGCAGAATGGGGAATaGAGCCAACCTGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: PGGHMVFCFIAVLGHCGDKQNGE*SQPVQF
Trigger: GAACTGAACAGGTTGGCTGCATTCCCCATTCTGCTT...ATCACCGCAATGCCCTAGAACAGCTATGAAGCAGAATACCATATGGCCACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTGCAATCTGGCAAGGCTaGAGTTTCTGTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSAIWQG*SFCAGL
Trigger: GAGTCCTGCACAGAAACTGCAGCCTTGCCAGATTGC...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATGAGACTCACCTGGCCTaGACGGCTAACCATAAGTCC +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDETHLA*TANHKS
Trigger: GGACTTATGGTTAGCCGTGCAGGCCAGGTGAGTCTC...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCTCTGGGTTCAGAATaGCCAGACGTCTATCCCTCA +
Preference number: 4 (lower is better)
Translates to: SMKGLRTQKSSYLEPSQIPLGSE*PDVYPS
Trigger: TGAGGGATAGACGTCTGGGCATTCTGAACCCAGAGG...AATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGGACTTAAGGTCGCGGTaGATGATGGGAACAATTGCC +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVDLRSR*MMGTIA
Trigger: GGCAATTGTTCCCATCATCCACCGCGACCTTAAGTC...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGACACATCACTGCCTTTaGAAAACATGGAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGTHHCL*KTWRPG
Trigger: TCCGGGCCTCCATGTTTTCCAAAGGCAGTGATGTGT...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTGGGCGAGTTTGTTCATaGCCACTCCATAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSGRVCS*PLHKRL
Trigger: CAGTCGCTTATGGAGTGGCCATGAACAAACTCGCCC...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGATTTGGCAAAAGGTTCTaGGCACGTAGAAGGAATAGG +
Preference number: 4 (lower is better)
Translates to: RKAPISNQARFPFLGVGGFGKRF*ARRRNR
Trigger: CCTATTCCTTCTACGTGCCCAGAACCTTTTGCCAAA...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCCAGACTCCTCTATGGTaGTTAGCTGGTCCAGGATAT +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSQTPLW*LAGPGY
Trigger: ATATCCTGGACCAGCTAACCACCATAGAGGAGTCTG...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGAACCAGACTCCTCTATaGTGGTTAGCTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVNQTPL*WLAGPG
Trigger: TCCTGGACCAGCTAACCACCATAGAGGAGTCTGGTT...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGCTCTCCACGAGGGAATaGGATACAGAGGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQLSTRE*DTEVGL
Trigger: CAGTCCTACCTCTGTATCCCATTCCCTCGTGGAGAG...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCATGGATTCCATCACTaGAGGGGCCATCGCCATCCT +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDHGFHH*RGHRHP
Trigger: AGGATGGCGATGGCCCCTCCAGTGATGGAATCCATG...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATGGTCTCGGCTGGGACTaGGGGTTTTCAACATTCCTG +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDGLGWD*GFSTFL
Trigger: CAGGAATGTTGAAAACCCCCAGTCCCAGCCGAGACC...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATGGAGACCCTCTGAAGTaGCCCTGTTTCCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDGDPLK*PCFHPF
Trigger: GAAGGGATGGAAACAGGGCCACTTCAGAGGGTCTCC...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGAGCAGCAGACAGATTTaGCTGAGTGACTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKSSRQI*LSDSAG
Trigger: CCCTGCAGAGTCACTCAGCCAAATCTGTCTGCTGCT...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAATCCAACACTGGTGTTTaGGAAGCTGAACTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQSNTGV*EAELGA
Trigger: AGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGA...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCCAACACTGGTGTTTaGGAAGCTGAACTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKSNTGV*EAELGA
Trigger: AGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGA...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGAAACAGTCTCACACTaGATGGCTCGAAGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKETVSH*MARRRG
Trigger: TCCTCGCCTTCGAGCCATCCAGTGTGAGACTGTTTC...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTGGCCCCAGCTAATTTaGGAAACAGTCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGWPQLI*ETVSHW
Trigger: CCAGTGTGAGACTGTTTCCCAAATTAGCTGGGGCCA...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCTGCCCCTGTGTGTTCTaGCCCCAGCTAATTTGGGAA +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLCPCVF*PQLIWE
Trigger: TTCCCAAATTAGCTGGGGCCAGAACACACAGGGGCA...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGGCAGAAGTTATGGATaGAGCAAGCCTGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRGRSYG*SKPGPV
Trigger: GACTGGTCCAGGCTTGCTCCATCCATAACTTCTGCC...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CCA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTATTGTCGAGGAGAGGTaGCAGAAGTTATGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCIVEER*QKLWME
Trigger: CTCCATCCATAACTTCTGCCACCTCTCCTCGACAAT...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCCTATGACCCCACACTaGGCCACCTTGCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDPMTPH*ATLLSV
Trigger: GACTGAAAGCAAGGTGGCCCAGTGTGGGGTCATAGG...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGGATTGTATCCGAACCTaGTCTGACGAGGTCCTGACC +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKDCIRT*SDEVLT
Trigger: GGTCAGGACCTCGTCAGACCAGGTTCGGATACAATC...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGACCTGTGCACAGGCCTTaGTCAGTTTTCAGTATGGGG +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARPVHRP*SVFSMG
Trigger: CCCCATACTGAAAACTGACCAAGGCCTGTGCACAGG...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 72 bp TTTTACTTCAAGGGCATCACAACATGGATGGCCCAGTaGAGAGTGAATTCCCAAGTCCCAATGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FYFKGITTWMAQ*RVNSQVPMSRW
Trigger: CCACCTGGACATTGGGACTTGGGAATTCACTCTCAACTGGGCCATCCATGTTGTGATGCCCTTGAAGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 72 bp AAGAGAGGTGACTTTGGAACCAAGCAGATCAGCAACTaGCTTCCTAGCTGTGTGACCCTGGGCAAATTACAG +
Preference number: 4 (lower is better)
Translates to: KRGDFGTKQISN*LPSCVTLGKLQ
Trigger: CTGTAATTTGCCCAGGGTCACACAGCTAGGAAGCAAGTTGCTGATCTGCTTGGTTCCAAAGTCACCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGTCCAGCAGTCTTCCATaGGTTTGGCAAAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVSSSLP*VWQKVL
Trigger: CAGAACCTTTTGCCAAACTCATGGAAGACTGCTGGA...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAGCAGTCTTCCATaGGTTTGGCAAAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGSSSLP*VWQKVL
Trigger: CAGAACCTTTTGCCAAACTCATGGAAGACTGCTGGA...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGAGGAAAAAGAGAGGTaGCTTTGGAACCAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: GLGHRKAPISNQARFPFLEEKER*LWNQAD
Trigger: ATCTGCTTGGTTCCAAAGTCACCTCTCTTTTTCCTC...CAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AGAGTAGTGGCATGGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACACTGCTAAGCCATCAATaGCTCGAAAGGGCACCTCAC +
Preference number: 4 (lower is better)
Translates to: RVVAWRRHTRESFRGSSTLLSHQ*LERAPH
Trigger: GTGAGGTGCCCTTTCGAGGCATTGATGGCTTAGCAG...TGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAATGCACCGTGAACTTGTaGTGGAAATCAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQCTVNL*WKSEGR
Trigger: CCTCCCTTCTGATTTCCAGCACAAGTTCACGGTGCA...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGTGCCCCAGGTTTTGCTaGTTTCACCTGGTGTCAATA +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVCPRFC*FHLVSI
Trigger: TATTGACACCAGGTGAAAGCAGCAAAACCTGGGGCA...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR GCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAAGTGCAGATAGGCAGTaGCAGGTCTATCAAGCCCTA +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKSADRQ*QVYQAL
Trigger: TAGGGCTTGATAGACCTGGCACTGCCTATCTGCACT...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCCAAAGCAAAGTGGGAATTCAAGGACACGGGGTCAGGACACATGAACAAGACAGTGCCCTCTGCTCTTTaGTTTGTTAAAAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PKAKWEFKDTGSGHMNKTVPSAL*FVKSEL
Trigger: CAGCTCACTTTTAACAAAGCAAAGAGCAGAGGGCAC...TGTCTTGTTCATGTGTCCTGACCCCGTGTCCTTGAATTCCCACTTTGCTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTTTCTAACAACTGAATaGGCGGGTAGCAACTGGGGT +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGFLTTE*AGSNWG
Trigger: ACCCCAGTTGCTACCCGCCCATTCAGTTGTTAGAAA...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGTTTCTAACAACTGAATaGGCGGGTAGCAACTGGGGT +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVFLTTE*AGSNWG
Trigger: ACCCCAGTTGCTACCCGCCCATTCAGTTGTTAGAAA...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGACTTAAGGTCGCGGTaGATGATGGGAACAATTGCC +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRDLRSR*MMGTIA
Trigger: GGCAATTGTTCCCATCATCCACCGCGACCTTAAGTC...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGACACATCACTGCCTTTaGAAAACATGGAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRTHHCL*KTWRPG
Trigger: TCCGGGCCTCCATGTTTTCCAAAGGCAGTGATGTGT...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAAAGATGGTCGTGAGTaGGGATCAGGATTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLKDGRE*GSGFQQ
Trigger: CTGCTGGAATCCTGATCCCCACTCACGACCATCTTT...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAGTGGAAGGAGTCCTTaGGCATTTCAAAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSSGRSP*AFQRNQ
Trigger: CTGGTTTCTTTGAAATGCCCAAGGACTCCTTCCACT...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAACCGTGAACTTGTGCTaGAAATCAGAAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQTVNLC*KSEGRL
Trigger: CAGCCTCCCTTCTGATTTCCAGCACAAGTTCACGGT...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAATTTGCTGCTTTCACCTaGTGTCAACTGGATGGCTCG +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQFAAFT*CQLDGS
Trigger: CGAGCCATCCAGTTGACACCAGGTGAAAGCAGCAAA...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGCTCGACTGGGCTGACTaGCATCTCATACACGACAAT +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRLDWAD*HLIHDN
Trigger: ATTGTCGTGTATGAGATGCCAGTCAGCCCAGTCGAG...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCGTGGGAGTCAGAGATTaGTTAGGATCTCGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSVGVRD*LGSRLK
Trigger: CTTCAAACGAGATCCTAACCAATCTCTGACTCCCAC...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGTGGGAGTCAGAGATTaGTTAGGATCTCGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GLGHRKAPISNQARFPFLVGVRD*LGSRLK
Trigger: CTTCAAACGAGATCCTAACCAATCTCTGACTCCCAC...CAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGTGGGAGTCAGAGATTaGTTAGGATCTCGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLVGVRD*LGSRLK
Trigger: CTTCAAACGAGATCCTAACCAATCTCTGACTCCCAC...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAACAAACAACGGTAAGGTaGGAAGGAAGACGGCATCCT +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQQTTVR*EGRRHP
Trigger: AGGATGCCGTCTTCCTTCCCACCTTACCGTTGTTTG...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553414.5
ENST00000554146.1
CDS-3UTR CCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCCAAACAACGGTAAGGTaGGAAGGAAGACGGCATCCT +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLQTTVR*EGRRHP
Trigger: AGGATGCCGTCTTCCTTCCCACCTTACCGTTGTTTG...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553414.5
ENST00000554146.1
CDS-3UTR CCA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTTTGCTGCTTTCACCTaGTGTCAATATGTGCATGTA +
Preference number: 4 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPFAAFT*CQYVHV
Trigger: TACATGCACATATTGACACCAGGTGAAAGCAGCAAA...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCTCCCCTTTCCACCTGTaGGCTCAGATAAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLSPFHL*AQINRW
Trigger: CCACCTATTTATCTGAGCCCACAGGTGGAAAGGGGA...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGATCCCCTTTCCACCTGTaGGCTCAGATAAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARSPFHL*AQINRW
Trigger: CCACCTATTTATCTGAGCCCACAGGTGGAAAGGGGA...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGTCCCCTTTCCACCTGTaGGCTCAGATAAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQSPFHL*AQINRW
Trigger: CCACCTATTTATCTGAGCCCACAGGTGGAAAGGGGA...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AATGAGAGACAGCCAACTGTCACTCTGATGTTGCTACCAACCTCCCTCTCTCATAGGTCTAGATGTCCTTaGGGTATCTCATTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: NERQPTVTLMLLPTSLSHRSRCP*GISLCP
Trigger: GGGACACAATGAGATACCCCAAGGACATCTAGACCT...ATGAGAGAGGGAGGTTGGTAGCAACATCAGAGTGACAGTTGGCTGTCTCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCATAAGAGACTCACCTaGCCTGCACGGCTAACCATA +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSHKRLT*PARLTI
Trigger: TATGGTTAGCCGTGCAGGCCAGGTGAGTCTCTTATG...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCTCCAGCAGTCTTCCATaGGTTTGGCAAAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLSSSLP*VWQKVL
Trigger: CAGAACCTTTTGCCAAACTCATGGAAGACTGCTGGA...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCCCTTTTCTTTGGCCCTaGGTTGGTCAAACATCTCCT +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLPFLWP*VGQTSP
Trigger: AGGAGATGTTTGACCAACTCAGGGCCAAAGAAAAGG...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAAAGGTTTCATATaGTCCACAGCAACGCTTCCT +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGSKGFI*STATLP
Trigger: AGGAAGCGTTGCTGTGGATCATATGAAACCTTTGGA...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553414.5
ENST00000554146.1
CDS-3UTR GCA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGAAAGCCACTGAGACCTaGTACTACTATACAGATCCT +
Preference number: 4 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWKATET*YYYTDP
Trigger: AGGATCTGTATAGTAGTAGCAGGTCTCAGTGGCTTT...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGGAACGTGTCTTTGTaGAAAGGGAAGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARRNVSL*KGKAEE
Trigger: TTCCTCTGCCTTCCCTTTGCACAAAGACACGTTCCT...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAACATGAAGTTAGCACCTaGCAAGAGCAGAAGGAACGT +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKHEVST*QEQKER
Trigger: ACGTTCCTTCTGCTCTTGGCAGGTGCTAACTTCATG...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGGTAAGATATCATTGTTaGTATTACTGCTACCACCAG +
Preference number: 4 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEVRYHC*YYCYHQ
Trigger: CTGGTGGTAGCAGTAATAGCAACAATGATATCTTAC...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAGGGGAAAAGATATGTaGAAATTCACACACCCAGGA +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSRGKDM*KFTHPG
Trigger: TCCTGGGTGTGTGAATTTGCACATATCTTTTCCCCT...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAATTCACCAGGATGTCTaGGGGAATCCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARIHQDV*GNPFPR
Trigger: TCTGGGAAAAGGATTCCCCCAGACATCCTGGTGAAT...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCTCTATGGTGGTTAGCTaGTCCAGGATATTCGTGAAA +
Preference number: 4 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSSMVVS*SRIFVK
Trigger: TTTCACGAATATCCTGGACCAGCTAACCACCATAGA...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGCAGACTCCTCTATGGTaGTTAGCTGGTCCAGGATAT +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRQTPLW*LAGPGY
Trigger: ATATCCTGGACCAGCTAACCACCATAGAGGAGTCTG...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCAGACTCCTCTATGGTaGTTAGCTGGTCCAGGATAT +
Preference number: 4 (lower is better)
Translates to: SMKGLRTQKSSYLEPSQIQTPLW*LAGPGY
Trigger: ATATCCTGGACCAGCTAACCACCATAGAGGAGTCTG...AATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp AATGAGAGACAGCCAACTGTCACTCTGATGTTGCTACCAACCTCCCTCTCTCATCAAGACAAAAGACAGTaGAGCAGCATTCAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: NERQPTVTLMLLPTSLSHQDKRQ*SSIQRV
Trigger: GACTCTCTGAATGCTGCTCCACTGTCTTTTGTCTTG...ATGAGAGAGGGAGGTTGGTAGCAACATCAGAGTGACAGTTGGCTGTCTCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp AATGAGAGACAGCCAACTGTCACTCTGATGTTGCTACCAACCTCCCTCTCTCATACTATTTCTGAAACCTaGCCTTGGACTTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: NERQPTVTLMLLPTSLSHTISET*PWTSVS
Trigger: GCTCACTGAAGTCCAAGGCCAGGTTTCAGAAATAGT...ATGAGAGAGGGAGGTTGGTAGCAACATCAGAGTGACAGTTGGCTGTCTCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 72 bp CTTTGCTTTGTTAAAAGTGAGCTGGATGAGTTAGGATaGCTCGGGAGGTGTCTCCTTCACACAAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LCFVKSELDELG*LGRCLLHTREG
Trigger: TCCTTCCCTTGTGTGAAGGAGACACCTCCCGAGCAATCCTAACTCATCCAGCTCACTTTTAACAAAGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 72 bp TTTCTGTGCAGGACTCATGGCCCCAGGACCATACATTaGAAAGTTAGAAGGGCTTCAGGAGGGAAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: FLCRTHGPRTIH*KVRRASGGKVD
Trigger: ATCTACTTTCCCTCCTGAAGCCCTTCTAACTTTCAAATGTATGGTCCTGGGGCCATGAGTCCTGCACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGCCAGGCCAAAATCAGTaGTCTTCAGAATCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQPGQNQ*SSESCC
Trigger: GCAACAAGATTCTGAAGATCACTGATTTTGGCCTGG...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCCCAGGCCAAAATCAGTaGTCTTCAGAATCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLPGQNQ*SSESCC
Trigger: GCAACAAGATTCTGAAGATCACTGATTTTGGCCTGG...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR TCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGATCACTCAATGGCAGGTaGCCATCATTCAGTTACACT +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARSLNGR*PSFSYT
Trigger: AGTGTAACTGAATGATGGTCACCTGCCATTGAGTGA...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAACGAATAGAAAGCCACTaGGACCTGCTACTACTATAC +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKRIESH*DLLLLY
Trigger: GTATAGTAGTAGCAGGTCTCAGTGGCTTTCTATTCG...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAACCAGGACCATACATTTaGAAGTTAGAAGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKPGPYI*KLEGLQ
Trigger: CTGAAGCCCTTCTAACTTTCAAATGTATGGTCCTGG...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAATCTAGGAATACGCTaGTCCGACAGAAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLNLGIR*SDRRDA
Trigger: TGCATCTCTTCTGTCGGATCAGCGTATTCCTAGATT...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGGGACGAGAGAATGAATaGAGTTCATTCACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGGRENE*SSFTSG
Trigger: TCCAGAAGTGAATGAACTTCATTCATTCTCTCGTCC...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCGGCCATATGGTATTCTaGTTCATAGCTGTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLGHMVF*FIAVLG
Trigger: CCCTAGAACAGCTATGAAGCAGAATACCATATGGCC...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AGAGTAGTGGCATGGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACAGCAAAGACCCAGGCTTaGTTTATCTTTCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: RVVAWRRHTRESFRGSSTAKTQA*FIFPHS
Trigger: ACTGTGGGGAAAGATAAAGCAAGCCTGGGTCTTTGC...TGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAACACACACACTTTTCTaGACCAAGGGAAGCAATCTG +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARTHTLF*TKGSNL
Trigger: CAGATTGCTTCCCTTGGTGCAGAAAAGTGTGTGTGT...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCAAACTAGGTGATGAGTaGTTTCAAAGAGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFKLGDE*FQRGQV
Trigger: GACCTGCCCTCTTTGAAAGCACTCATCACCTAGTTT...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAATTTGGCAAAAGGTTCTaGGCACGTAGAAGGAATAGG +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKFGKRF*ARRRNR
Trigger: CCTATTCCTTCTACGTGCCCAGAACCTTTTGCCAAA...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGTTTGGCAAAAGGTTCTaGGCACGTAGAAGGAATAGG +
Preference number: 4 (lower is better)
Translates to: SLPSSKCIISARSRAGSQFGKRF*ARRRNR
Trigger: CCTATTCCTTCTACGTGCCCAGAACCTTTTGCCAAA...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGTCTATGGTGGTTAGCTaGTCCAGGATATTCGTGAAA +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVSMVVS*SRIFVK
Trigger: TTTCACGAATATCCTGGACCAGCTAACCACCATAGA...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTGGAAGGAGTCCTTaGGCATTTCAAAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: EVALFPSLPSSKCIISARSGRSP*AFQRNQ
Trigger: CTGGTTTCTTTGAAATGCCCAAGGACTCCTTCCACT...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGCCATTCTCCACCTTCTaGAGGATCAATAATGTTAGA +
Preference number: 4 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLPFSTF*RINNVR
Trigger: TCTAACATTATTGATCCTCCAGAAGGTGGAGAATGG...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGACTTGAGGCCCAAGTaGAAATGTGGAGATTCTGAT +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSRDLRPK*KCGDSD
Trigger: ATCAGAATCTCCACATTTCCACTTGGGCCTCAAGTC...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGAAGAATCACTTGGTTaGCTGGAACTGCTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: ALFPSLPSSKCIISARSREESLG*LELLVR
Trigger: TCTTACCAGCAGTTCCAGCCAACCAAGTGATTCTTC...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 72 bp CAAGTAGCTAGATGGGTACCCTCAATACTTGCTGGTTaGCCCTTTGCCGAGAGTTTCCAAAAAGAACAAGGA +
Preference number: 4 (lower is better)
Translates to: QVARWVPSILAG*PFAESFQKEQG
Trigger: TCCTTGTTCTTTTTGGAAACTCTCGGCAAAGGGCAAACCAGCAAGTATTGAGGGTACCCATCTAGCTACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 72 bp TTCCTTCTCTGTAAGACACAAGTGGTGAGGATGACATaGGCAGACAGCATCAGACAAGTTAAGTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: FLLCKTQVVRMT*ADSIRQVKWGN
Trigger: ATTCCCCCACTTAACTTGTCTGATGCTGTCTGCCAATGTCATCCTCACCACTTGTGTCTTACAGAGAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAAAACTATTCCTGGGATaGGCAGATGATTGTATCCGA +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKKLFLG*ADDCIR
Trigger: TCGGATACAATCATCTGCTCATCCCAGGAATAGTTT...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAATAGAGAAAGAGCAGTaGCCAATTCATCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: NHRISNTGVWEAELGADKIEKEQ*PIHHCC
Trigger: GCAACAGTGATGAATTGGTCACTGCTCTTTCTCTAT...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTACATATTGGCTTCACTaGACAAAGAGAAGGACACAG +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSTYWLH*TKRRTQ
Trigger: CTGTGTCCTTCTCTTTGTTCAGTGAAGCCAATATGT...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCTCCCCATCAAGAATaGAGAAGAATCACTTGGTTG +
Preference number: 4 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKSPHQE*RRITWL
Trigger: CAACCAAGTGATTCTTCTTCATTCTTGATGGGGAGA...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTTCTTCAGAATCTTGTTaGTCAGGTCTCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSSSESC*SGLHSP
Trigger: TGGAGAATGGAGACCTGAGCAACAAGATTCTGAAGA...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAATCTTCAGAATCTTGTTaGTCAGGTCTCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQSSESC*SGLHSP
Trigger: TGGAGAATGGAGACCTGAGCAACAAGATTCTGAAGA...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR GCA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCTTGTCAACACCAGATaGTATATAAATGCGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVLVNTR*YINAAE
Trigger: TTCTGCCGCATTTATATAGCATCTGGTGTTGACAAG...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp AGAGTAGTGGCATGGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACACTAAAGGAGCCTCTCTaGCATAATCACTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RVVAWRRHTRESFRGSSTLKEPL*HNHFPS
Trigger: AGAAGGGAAGTGATTATGGCAGAGAGGCTCCTTTAG...TGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGCTCCCTCATTTCCTaGTCAAAATTCCTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSSSLIS*SKFLPK
Trigger: TTTTGGGAGGAATTTTGAGCAGGAAATGAGGGAGCT...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554146.1
CDS-3UTR CCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCTCTATGGTGGTTAGCTaGTCCAGGATATTCGTGAAA +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLSMVVS*SRIFVK
Trigger: TTTCACGAATATCCTGGACCAGCTAACCACCATAGA...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CCA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCCTACATCTAGAAAGATaGCTGCAACCTACCACAATG +
Preference number: 4 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFLHLER*LQPTTM
Trigger: CATTGTGGTAGGTTGCAGCCATCTTTCTAGATGTAG...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 72 bp CTAGATGGGTACCCTCAATACTTGCTGGTTTGCCCTTaGCCGAGAGTTTCCAAAAAGAACAAGGACATACTT +
Preference number: 4 (lower is better)
Translates to: LDGYPQYLLVCP*PRVSKKNKDIL
Trigger: AAGTATGTCCTTGTTCTTTTTGGAAACTCTCGGCAAAGGGCAAACCAGCAAGTATTGAGGGTACCCATCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 72 bp ACTGTTCCTTCTTCATGGATGCTCACAGTAGCACCTTaGGATAGCCCTGCTTTTGCTTCTTTCAGGTACAAT +
Preference number: 4 (lower is better)
Translates to: TVPSSWMLTVAP*DSPAFASFRYN
Trigger: ATTGTACCTGAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGAAGGAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 72 bp CACTATTCTGAGTTGTCCAGATGTAAGATATCATTGTaGCTATTACTGCTACCACCAGACCCTAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: HYSELSRCKISL*LLLLPPDPRDA
Trigger: GGCATCCCTAGGGTCTGGTGGTAGCAGTAATAGCAACAATGATATCTTACATCTGGACAACTCAGAATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR TCA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTATCTGGACGAGAGAATaGATGAAGTTCATTCACTTC +
Preference number: 4 (lower is better)
Translates to: VALFPSLPSSKCIISARSIWTRE*MKFIHF
Trigger: GAAGTGAATGAACTTCATTCATTCTCTCGTCCAGAT...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR GCA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATAAGGATATACAGATGTaGTCATGGTTTAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDKDIQM*SWFSLR
Trigger: CCTCAGGCTAAACCATGAGCACATCTGTATATCCTT...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CCA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCGCAATAACAAAACCTTaGGCAATAAAACCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLAITKP*AIKPVA
Trigger: CGCTACTGGTTTTATTGCCCAAGGTTTTGTTATTGC...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
3UTR CAA 72 bp AGAAAAGAAAGTGAGCAAGTTCATCACCTCCCTTCTTaGCTACAACTGTGTATCAAAGGCATGTGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: RKESEQVHHLPS*LQLCIKGMWLN
Trigger: ATTGAGCCACATGCCTTTGATACACAGTTGTAGCAAAGAAGGGAGGTGATGAACTTGCTCACTTTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS GCA 90 bp TCACCTCTGCCGCCGGTACCTGCTCGCGCAGCCGGTGCCCGCCGCTaGCAGCCGGCCGCCGCTCTCCTCTCCGCGCCGTGCCGTGCCCCG +
Preference number: 5 (lower is better)
Translates to: SPLPPVPARAAGARR*QPAAALLSAPCRAP
Trigger: CGGGGCACGGCACGGCGCGGAGAGGAGAGCGGCGGCCGGCTGGCAGCGGCGGGCACCGGCTGCGCGAGCAGGTACCGGCGGCAGAGGTGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555993.6
CDS CCA 90 bp CGGCGGCGCTCGCTAGGCAGCCGAGAAGCGCTCTGGAGGGCTCCATaGAGCGGCCGATCCATAGGGTGCGGGGCCGCCGCCGCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: RRRSLGSREALWRAP*SGRSIGCGAAAARR
Trigger: CCTGCGGGCGGCGGCGGCCCCGCACCCTATGGATCGGCCGCTCCATGGAGCCCTCCAGAGCGCTTCTCGGCTGCCTAGCGAGCGCCGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS CCA 90 bp GCGGGGCGGCAGCGGCGGCGCTCGCTAGGCAGCCGAGAAGCGCTCTaGAGGGCTCCATGGAGCGGCCGATCCATAGGGTGCGGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: AGRQRRRSLGSREAL*RAPWSGRSIGCGAA
Trigger: GGCGGCCCCGCACCCTATGGATCGGCCGCTCCATGGAGCCCTCCAGAGCGCTTCTCGGCTGCCTAGCGAGCGCCGCCGCTGCCGCCCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS GCA 90 bp CGAGAAGCGCTCTGGAGGGCTCCATGGAGCGGCCGATCCATAGGGTaGGGGGCCGCCGCCGCCCGCAGGAGCCGCCGCCGCCTATTGTTC +
Preference number: 5 (lower is better)
Translates to: REALWRAPWSGRSIG*GAAAARRSRRRLLF
Trigger: GAACAATAGGCGGCGGCGGCTCCTGCGGGCGGCGGCGGCCCCGCACCCTATGGATCGGCCGCTCCATGGAGCCCTCCAGAGCGCTTCTCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS GCA 90 bp TTCCGCTCTGCACAGCGGCACGGTGCTGTCCTGACTCTGCCCCTCTaGATCCAGGTCCAGGAGCGTCCGCTCAGTCGGGGGCAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: FRSAQRHGAVLTLPL*IQVQERPLSRGQRP
Trigger: GGGCCGCTGCCCCCGACTGAGCGGACGCTCCTGGACCTGGATGCAGAGGGGCAGAGTCAGGACAGCACCGTGCCGCTGTGCAGAGCGGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCTGGGCACCGCCCCGCTaGAGGCTGTTGGTTGGCGTC +
Preference number: 5 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCWAPPR*RLLVGV
Trigger: GACGCCAACCAACAGCCTCAAGCGGGGCGGTGCCCA...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGCTGGGGCTCAACCCATaGCTGGAGGGGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPLGLNP*LEGLLL
Trigger: CAGCAGGAGCCCCTCCAGCAATGGGTTGAGCCCCAG...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 90 bp CCAGGTTGCTGGGCGTCTCTGTGCTGGAGCTGTTGGCTGGGGAGGTaGTGCGGGCATGGCTGGGGGACACAAACCACCAAGGGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PGCWASLCWSCWLGR*CGHGWGTQTTKGPA
Trigger: GGCTGGACCCTTGGTGGTTTGTGTCCCCCAGCCATGCCCGCAGCACCTCCCCAGCCAACAGCTCCAGCACAGAGACGCCCAGCAACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCGTACTCGTGGCCGAGTaGACTGGGGTGGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCVLVAE*TGVGSS
Trigger: TGAGGAGCCCACCCCAGTCAACTCGGCCACGAGTAC...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTTGGGCACCGCCCCGCTaGAGGCTGTTGGTTGGCGTC +
Preference number: 5 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAWAPPR*RLLVGV
Trigger: GACGCCAACCAACAGCCTCAAGCGGGGCGGTGCCCA...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCCTGGGGCTCAACCCATaGCTGGAGGGGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: ELMATAPPVDTGRKALQGLGLNP*LEGLLL
Trigger: CAGCAGGAGCCCCTCCAGCAATGGGTTGAGCCCCAG...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCTCTGTGCTGGAGCTGTaGGCTGGGGAGGTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: ELMATAPPVDTGRKALQGSVLEL*AGEVLR
Trigger: CCGCAGCACCTCCCCAGCCAACAGCTCCAGCACAGA...GCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 90 bp CTGCGGGCATGGCTGGGGGACACAAACCACCAAGGGTCCAGCCGTTaGCGGTTGGCAGAAGGACGCGGCCGAGGCAGAAACTCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: LRAWLGDTNHQGSSR*RLAEGRGRGRNSRV
Trigger: GACTCTGGAGTTTCTGCCTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTGGTGGTTTGTGTCCCCCAGCCATGCCCGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 90 bp GGGCAGGCCTGTGTGTGTTCAGTTCCGCTCTGCACAGCGGCACGGTaGTGTCCTGACTCTGCCCCTCTGCATCCAGGTCCAGGAGCGTCC +
Preference number: 5 (lower is better)
Translates to: GQACVCSVPLCTAAR*CPDSAPLHPGPGAS
Trigger: GGACGCTCCTGGACCTGGATGCAGAGGGGCAGAGTCAGGACAGCACCGTGCCGCTGTGCAGAGCGGAACTGAACACACACAGGCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 90 bp GCAGGAGTCCAGGTTGCTGGGCGTCTCTGTGCTGGAGCTGTTGGCTaGGGAGGTGCTGCGGGCATGGCTGGGGGACACAAACCACCAAGG +
Preference number: 5 (lower is better)
Translates to: AGVQVAGRLCAGAVG*GGAAGMAGGHKPPR
Trigger: CCTTGGTGGTTTGTGTCCCCCAGCCATGCCCGCAGCACCTCCCCAGCCAACAGCTCCAGCACAGAGACGCCCAGCAACCTGGACTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 90 bp CCAACTGGCTGCCAGCAAGGCCATCTCCATAAGGCTGGTGAACCCTaGCAGGGCCGGGCTACTCCTTGGGCCCTTCACCAGGTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: PTGCQQGHLHKAGEP*QGRATPWALHQVGG
Trigger: GCCCCCAACCTGGTGAAGGGCCCAAGGAGTAGCCCGGCCCTGCCAGGGTTCACCAGCCTTATGGAGATGGCCTTGCTGGCAGCCAGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554146.1
ENST00000555993.6
CDS-3UTR CAA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGCCATCTACCAGGGACTaGAGGCCTTCATCTCCCGAG +
Preference number: 5 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPPSTRD*RPSSPE
Trigger: CTCGGGAGATGAAGGCCTCAAGTCCCTGGTAGATGG...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
CDS-3UTR CAA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTGTACTCGTGGCCGAGTaGACTGGGGTGGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPVLVAE*TGVGSS
Trigger: TGAGGAGCCCACCCCAGTCAACTCGGCCACGAGTAC...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCATGGGCACCGCCCCGCTaGAGGCTGTTGGTTGGCGTC +
Preference number: 5 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPWAPPR*RLLVGV
Trigger: GACGCCAACCAACAGCCTCAAGCGGGGCGGTGCCCA...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCCAAGGGTCCAGCCGTaGCCGGTTGGCAGAAGGACG +
Preference number: 5 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAPRVQP*PVGRRT
Trigger: CGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTGG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 90 bp CCCGGGCTGGTGGCTCAGGCTCCTCCAGGGGAAGCAGCTGGCACTTaGCAGCTTCCAGCAAGTCAAACCCTAGGCCTGTGGCTGCCAGAA +
Preference number: 5 (lower is better)
Translates to: PGLVAQAPPGEAAGT*QLPASQTLGLWLPE
Trigger: TTCTGGCAGCCACAGGCCTAGGGTTTGACTTGCTGGAAGCTGGCAAGTGCCAGCTGCTTCCCCTGGAGGAGCCTGAGCCACCAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGCACACATCACTGCCTTaGGAAAACATGGAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPHTSLP*ENMEAR
Trigger: CCGGGCCTCCATGTTTTCCAAAGGCAGTGATGTGTG...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCATGCGGTTGCCATCCTaGAGCTTCAGCCGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCMRLPS*SFSRLF
Trigger: GAAGAGCCGGCTGAAGCTCAAGGATGGCAACCGCAT...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGTACTCGTGGCCGAGTaGACTGGGGTGGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PELMATAPPVDTGRKALQVLVAE*TGVGSS
Trigger: TGAGGAGCCCACCCCAGTCAACTCGGCCACGAGTAC...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCACCAAGGGTCCAGCCGTaGCCGGTTGGCAGAAGGACG +
Preference number: 5 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPPRVQP*PVGRRT
Trigger: CGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTGG...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS CCA 90 bp CTTCTGACCAAGCGTCCCTGGCCCCCACGTCCGTCCCTTCTTCTTTaGGGCCCTCTTCTCCTCCTCCTCCCCTTCCTCCTTTGGGACGAC +
Preference number: 5 (lower is better)
Translates to: LLTKRPWPPRPSLLL*GPLLLLLPFLLWDD
Trigger: GTCGTCCCAAAGGAGGAAGGGGAGGAGGAGGAGAAGAGGGCCCCAAAGAAGAAGGGACGGACGTGGGGGCCAGGGACGCTTGGTCAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 90 bp GCCTTCACTGTCCTCATCCTCCATCTCCATAAGGCTGGTGAACCCTaGCAGGGCCGGGCTACTCCTTGGGCCCTTCACCAGGTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: AFTVLILHLHKAGEP*QGRATPWALHQVGG
Trigger: GCCCCCAACCTGGTGAAGGGCCCAAGGAGTAGCCCGGCCCTGCCAGGGTTCACCAGCCTTATGGAGATGGAGGATGAGGACAGTGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381250.8
ENST00000554752.7
CDS CCA 90 bp GCTGTTGGTTGGCGTCAGCTGAGGGGTACTCGTGGCCGAGTTGACTaGGGTGGGCTCCTCATGGATTCCATCACTGGAGGGGCCATCGCC +
Preference number: 5 (lower is better)
Translates to: AVGWRQLRGTRGRVD*GGLLMDSITGGAIA
Trigger: GGCGATGGCCCCTCCAGTGATGGAATCCATGAGGAGCCCACCCCAGTCAACTCGGCCACGAGTACCCCTCAGCTGACGCCAACCAACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 90 bp CATGGCTGGGGGACACAAACCACCAAGGGTCCAGCCGTTGCCGGTTaGCAGAAGGACGCGGCCGAGGCAGAAACTCCAGAGTCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: HGWGTQTTKGPAVAG*QKDAAEAETPESWV
Trigger: GACCCAAGACTCTGGAGTTTCTGCCTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTGGTGGTTTGTGTCCCCCAGCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCCTGCCGCACTCATCTaGGTGGTTCGGTGCCATTCC +
Preference number: 5 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAPAALI*VVRCHS
Trigger: GGAATGGCACCGAACCACCAAGATGAGTGCGGCAGG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCACACATCACTGCCTTaGGAAAACATGGAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCHTSLP*ENMEAR
Trigger: CCGGGCCTCCATGTTTTCCAAAGGCAGTGATGTGTG...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTCTCCTGCCCCAGGTTTaGCTGCTTTCACCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPLLPQV*LLSPGV
Trigger: GACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGAG...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCACCTCCCCTTCCTCCTTaGGGACGACTGAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPPPLPP*GRLSSC
Trigger: GCAGGAGCTCAGTCGTCCCAAAGGAGGAAGGGGAGG...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCTGGTGGATGATGATGTaGAGCTCCCGTTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCWWMMM*SSRSRM
Trigger: CATCCTGGAACGGGAGCTCAACATCATCATCCACCA...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCTCCTGCCCCAGGTTTaGCTGCTTTCACCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPALLPQV*LLSPGV
Trigger: GACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGAG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTTCCGTCCCTTCTTCTTaGGGGCCCTCTTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPASVPSS*GPSSPP
Trigger: AGGAGGAGAAGAGGGCCCCAAAGAAGAAGGGACGGA...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGCGCTCTACTCGGACATaGACCAGGGGGTTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: PELMATAPPVDTGRKALQRSTRT*TRGLWV
Trigger: TACCCACAACCCCCTGGTCAATGTCCGAGTAGAGCG...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAAAGCAGGAGTCCAGGTaGCTGGGCGTCTCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPKQESR*LGVSVL
Trigger: CAGCACAGAGACGCCCAGCAACCTGGACTCCTGCTT...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 90 bp GCTGGATCTCATAAGGGGCAGGCCTGTGTGTGTTCAGTTCCGCTCTaGACAGCGGCACGGTGCTGTCCTGACTCTGCCCCTCTGCATCCA +
Preference number: 5 (lower is better)
Translates to: AGSHKGQACVCSVPL*TAARCCPDSAPLHP
Trigger: TGGATGCAGAGGGGCAGAGTCAGGACAGCACCGTGCCGCTGTGCAGAGCGGAACTGAACACACACAGGCCTGCCCCTTATGAGATCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCAGTCTTCCATGAGTTaGGCAAAAGGTTCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCQSSMS*AKGSGH
Trigger: GTGCCCAGAACCTTTTGCCAAACTCATGGAAGACTG...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCCCGCAGTGGAAGGAGTCCTaGGGCATTTCAAAGAAACCA +
Preference number: 5 (lower is better)
Translates to: KGLCPPAPLISAGCPPCPQWKES*GISKKP
Trigger: TGGTTTCTTTGAAATGCCCAAGGACTCCTTCCACTG...CGGGCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTATGGGCTCCTCCTTCTaGAAAAGCTTTCGGGATGGG +
Preference number: 5 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPMGSSF*KSFRDG
Trigger: CCCATCCCGAAAGCTTTTCAAGAAGGAGGAGCCCAT...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAGAAAGGGCTGTGCCCGCCAGCTCCCCTCATCTCCGCTGGCTGTCCCCCTTGCTGGTTAGGATCTCGTTaGAAGCGCTCTACTCGGACA +
Preference number: 5 (lower is better)
Translates to: EKGLCPPAPLISAGCPPCWLGSR*KRSTRT
Trigger: TGTCCGAGTAGAGCGCTTCAAACGAGATCCTAACCA...GCAAGGGGGACAGCCAGCGGAGATGAGGGGAGCTGGCGGGCACAGCCCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGGGGCTCAACCCATaGCTGGAGGGGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQLGLNP*LEGLLL
Trigger: CAGCAGGAGCCCCTCCAGCAATGGGTTGAGCCCCAG...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACTCTGTGCTGGAGCTGTaGGCTGGGGAGGTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDSVLEL*AGEVLR
Trigger: CCGCAGCACCTCCCCAGCCAACAGCTCCAGCACAGA...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS GCA 90 bp GAGCAAGCCTGGACCAGTCGGTGGCTGGACAGAGCAGGGGACAGGTaGCCCTGTGTGTTCTGGCCCCAGCTAATTTGGGAAACAGTCTCA +
Preference number: 5 (lower is better)
Translates to: EQAWTSRWLDRAGDR*PCVFWPQLIWETVS
Trigger: TGAGACTGTTTCCCAAATTAGCTGGGGCCAGAACACACAGGGGCACCTGTCCCCTGCTCTGTCCAGCCACCGACTGGTCCAGGCTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS CCA 90 bp CGCCATCCTCTCCACGAGGGAATGGGATACAGAGGTAGGACTGGCTaGGTGAATGCTGTAGGCGACTCTCTCCACTCCCTGGGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: RHPLHEGMGYRGRTG*VNAVGDSLHSLGLH
Trigger: GTGAAGGCCCAGGGAGTGGAGAGAGTCGCCTACAGCATTCACCCAGCCAGTCCTACCTCTGTATCCCATTCCCTCGTGGAGAGGATGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAAGACACCTGCGAGTCCTaGGACAGCACCTCCACCACG +
Preference number: 5 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQDTCES*DSTSTT
Trigger: CGTGGTGGAGGTGCTGTCCAAGGACTCGCAGGTGTC...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTTGGTGGATGATGATGTaGAGCTCCCGTTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAWWMMM*SSRSRM
Trigger: CATCCTGGAACGGGAGCTCAACATCATCATCCACCA...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGGGGCCGGGCTACTCCTaGGGCCCTTCACCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEGPGYS*GPSPGW
Trigger: CCAACCTGGTGAAGGGCCCAAGGAGTAGCCCGGCCC...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CCAGAGCTGATGGCCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGATGGGCTCCTCCTTCTaGAAAAGCTTTCGGGATGGG +
Preference number: 5 (lower is better)
Translates to: PELMATAPPVDTGRKALQMGSSF*KSFRDG
Trigger: CCCATCCCGAAAGCTTTTCAAGAAGGAGGAGCCCAT...CTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGGCCATCAGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAACATTGACCAGGGGGTaGTGGGTACATGGACTCAGG +
Preference number: 5 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPTLTRG*WVHGLR
Trigger: CCTGAGTCCATGTACCCACAACCCCCTGGTCAATGT...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCAACATTGACCAGGGGGTaGTGGGTACATGGACTCAGG +
Preference number: 5 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPTLTRG*WVHGLR
Trigger: CCTGAGTCCATGTACCCACAACCCCCTGGTCAATGT...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGTCCAGCCGTTGCCGGTaGGCAGAAGGACGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: SALSVQEVGLDLRGSNPESSRCR*AEGRGR
Trigger: TCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGA...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCCCACATCTGTGCTGGAGCTGTaGGCTGGGGAGGTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: HLEVQIGSARSIKPYDPTSVLEL*AGEVLR
Trigger: CCGCAGCACCTCCCCAGCCAACAGCTCCAGCACAGA...TGTGGGGTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGAAGCAGGAGTCCAGGTaGCTGGGCGTCTCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLKQESR*LGVSVL
Trigger: CAGCACAGAGACGCCCAGCAACCTGGACTCCTGCTT...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TGCCACTCAAGTGGCTTCATCCACAGCTCCAGGGCCTGCTCCCGACCAGGACCACAGGCTTTGTCTGGGTaGGTGTCCAGGTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: CHSSGFIHSSRACSRPGPQALSG*VSRCEG
Trigger: TCCTTCACACCTGGACACCAACCCAGACAAAGCCTG...TGGTCCTGGTCGGGAGCAGGCCCTGGAGCTGTGGATGAAGCCACTTGAGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS GCA 90 bp ACTGTCCTCATCCTCTTCAATGTCGATGGGCACCACCCAACTGGCTaGCAGCAAGGCCATCTCCATAAGGCTGGTGAACCCTGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: TVLILFNVDGHHPTG*QQGHLHKAGEPWQG
Trigger: GCCCTGCCAGGGTTCACCAGCCTTATGGAGATGGCCTTGCTGGCAGCCAGTTGGGTGGTGCCCATCGACATTGAAGAGGATGAGGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554146.1
ENST00000555993.6
CDS CCA 90 bp GTTGTGGGTACATGGACTCAGGGGAGGGGCCTCGACTGGGCTGACTaGCATCTCATACACGACAATTTCATCGCTGTCGGAGCGCAGCAG +
Preference number: 5 (lower is better)
Translates to: VVGTWTQGRGLDWAD*HLIHDNFIAVGAQQ
Trigger: CTGCTGCGCTCCGACAGCGATGAAATTGTCGTGTATGAGATGCCAGTCAGCCCAGTCGAGGCCCCTCCCCTGAGTCCATGTACCCACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCAGCCGCCGCCGCCTATaGTTCATGCGCCTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPSRRRL*FMRLRR
Trigger: TCTGCGGAGGCGCATGAACAATAGGCGGCGGCGGCT...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTGAAGAGCTTGGCCTCTaGGCGAACATTCTCTATGGT +
Preference number: 5 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAEELGL*ANILYG
Trigger: ACCATAGAGAATGTTCGCCAAGAGGCCAAGCTCTTC...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGTTCCTGAACTTGCCCTaGCGTTTCTTCACCCGGGGC +
Preference number: 5 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLFLNLP*RFFTRG
Trigger: GCCCCGGGTGAAGAAACGCAAGGGCAAGTTCAGGAA...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCATGCGGTTGCCATCCTaGAGCTTCAGCCGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCMRLPS*SFSRLF
Trigger: GAAGAGCCGGCTGAAGCTCAAGGATGGCAACCGCAT...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCTCCTGCCCCAGGTTTaGCTGCTTTCACCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCLLPQV*LLSPGV
Trigger: GACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGAG...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGATGGGCACCGCCCCGCTaGAGGCTGTTGGTTGGCGTC +
Preference number: 5 (lower is better)
Translates to: RKAPISNQARFPFLGVGGWAPPR*RLLVGV
Trigger: GACGCCAACCAACAGCCTCAAGCGGGGCGGTGCCCA...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAATGGGCTCCTCCTTCTaGAAAAGCTTTCGGGATGGG +
Preference number: 5 (lower is better)
Translates to: EVGLDLRGSNPEKGLCPPMGSSF*KSFRDG
Trigger: CCCATCCCGAAAGCTTTTCAAGAAGGAGGAGCCCAT...TGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTGGTGGGAGTCAGAGATaGGTTAGGATCTCGTTTGAA +
Preference number: 5 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPGGSQR*VRISFE
Trigger: TTCAAACGAGATCCTAACCAATCTCTGACTCCCACC...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTAGAAACTCCAGAGTCTaGGGTCTCTCCAAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPARNSRV*GLSKVE
Trigger: CTCTACCTTGGAGAGACCCAAGACTCTGGAGTTTCT...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGATCCAGCCGTTGCCGGTaGGCAGAAGGACGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: RKAPISNQARFPFLGVGGSSRCR*AEGRGR
Trigger: TCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGA...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGCCAAGGGTCCAGCCGTaGCCGGTTGGCAGAAGGACG +
Preference number: 5 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEPRVQP*PVGRRT
Trigger: CGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTGG...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTCTGTGCTGGAGCTGTaGGCTGGGGAGGTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPSVLEL*AGEVLR
Trigger: CCGCAGCACCTCCCCAGCCAACAGCTCCAGCACAGA...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CCACAGCCCCTCCAGTGGACACGGGTAGAAAGGCCCTGCAGGGCAGGAGACCCTGCATGTATATACACATaGTCGAGGAGAGGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: PQPLQWTRVERPCRAGDPACIYT*SRRGGR
Trigger: TCTGCCACCTCTCCTCGACAATGTGTATATACATGC...AGGGTCTCCTGCCCTGCAGGGCCTTTCTACCCGTGTCCACTGGAGGGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS GCA 90 bp TCTTCTCCTCCTCCTCCCCTTCCTCCTTTGGGACGACTGAGCTCCTaGCCCAGGTTTTGCTGCTTTCACCTGGTGTCAACTGGATGGCTC +
Preference number: 5 (lower is better)
Translates to: SSPPPPLPPLGRLSS*PRFCCFHLVSTGWL
Trigger: GAGCCATCCAGTTGACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGAGCTCAGTCGTCCCAAAGGAGGAAGGGGAGGAGGAGGAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCACACATCACTGCCTTaGGAAAACATGGAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCHTSLP*ENMEAR
Trigger: CCGGGCCTCCATGTTTTCCAAAGGCAGTGATGTGTG...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCCGCCAGCTCAGTGGAAGGAGTCCTaGGGCATTTCAAAGAAACCA +
Preference number: 5 (lower is better)
Translates to: VGLDLRGSNPEKGLCPPAQWKES*GISKKP
Trigger: TGGTTTCTTTGAAATGCCCAAGGACTCCTTCCACTG...AGCTGGCGGGCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TACAGAGGCCCCCGTACTTCCAGGGCCCAAGACGGGAAATGGATGAGGAAGCGGTGGTGGATGATGATGTaGAGCTCCCGTTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: YRGPRTSRAQDGKWMRKRWWMMM*SSRSRM
Trigger: CATCCTGGAACGGGAGCTCAACATCATCATCCACCA...CCGCTTCCTCATCCATTTCCCGTCTTGGGCCCTGGAAGTACGGGGGCCTCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACTGCGGCTCTTCCTGAACTaGCCCTTGCGTTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: LNSGLTKGPYDSSAHTQLRLFLN*PLRFFT
Trigger: GGTGAAGAAACGCAAGGGCAAGTTCAGGAAGAGCCG...CAGTTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGCCTCCCCTTCCTCCTTaGGGACGACTGAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGPPLPP*GRLSSC
Trigger: GCAGGAGCTCAGTCGTCCCAAAGGAGGAAGGGGAGG...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGCCGGGCTACTCCTaGGGCCCTTCACCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLGPGYS*GPSPGW
Trigger: CCAACCTGGTGAAGGGCCCAAGGAGTAGCCCGGCCC...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGTCCAGCCGTTGCCGGTaGGCAGAAGGACGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWSSRCR*AEGRGR
Trigger: TCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGA...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TACAGAGGCCCCCGTACTTCCAGGGCCCAAGACGGGAAATGGATGAGGAAGCGGGGACACAACTCCTCCTaGGGCAAAGGGCAATCTCAA +
Preference number: 5 (lower is better)
Translates to: YRGPRTSRAQDGKWMRKRGHNSS*GKGQSQ
Trigger: TTGAGATTGCCCTTTGCCCAAGGAGGAGTTGTGTCC...CCGCTTCCTCATCCATTTCCCGTCTTGGGCCCTGGAAGTACGGGGGCCTCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTTCCTGAACTTGCCCTaGCGTTTCTTCACCCGGGGC +
Preference number: 5 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSFLNLP*RFFTRG
Trigger: GCCCCGGGTGAAGAAACGCAAGGGCAAGTTCAGGAA...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACTTCCTGAACTTGCCCTaGCGTTTCTTCACCCGGGGC +
Preference number: 5 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDFLNLP*RFFTRG
Trigger: GCCCCGGGTGAAGAAACGCAAGGGCAAGTTCAGGAA...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCATGCGGTTGCCATCCTaGAGCTTCAGCCGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSMRLPS*SFSRLF
Trigger: GAAGAGCCGGCTGAAGCTCAAGGATGGCAACCGCAT...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCAAGCAGGAGTCCAGGTaGCTGGGCGTCTCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPKQESR*LGVSVL
Trigger: CAGCACAGAGACGCCCAGCAACCTGGACTCCTGCTT...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAACCACACTGGGCCACCTaGCTTTCAGTCTTCCTGCTA +
Preference number: 5 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQPHWAT*LSVFLL
Trigger: TAGCAGGAAGACTGAAAGCAAGGTGGCCCAGTGTGG...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS TCA 90 bp CATAGCTCCACACATCACTGCCTTTGGAAAACATGGAGGCCCGGATaGCTTCGGGTGCCATCCAAGCATACGTCCCTGCCGCACTCATCT +
Preference number: 5 (lower is better)
Translates to: HSSTHHCLWKTWRPG*LRVPSKHTSLPHSS
Trigger: AGATGAGTGCGGCAGGGACGTATGCTTGGATGGCACCCGAAGTCATCCGGGCCTCCATGTTTTCCAAAGGCAGTGATGTGTGGAGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGAGCCGCCGCCGCCTATaGTTCATGCGCCTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVSRRRL*FMRLRR
Trigger: TCTGCGGAGGCGCATGAACAATAGGCGGCGGCGGCT...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCCACACATCACTGCCTTaGGAAAACATGGAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSHTSLP*ENMEAR
Trigger: CCGGGCCTCCATGTTTTCCAAAGGCAGTGATGTGTG...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGCCTCCCCTTCCTCCTTaGGGACGACTGAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GLGHRKAPISNQARFPFLPPLPP*GRLSSC
Trigger: GCAGGAGCTCAGTCGTCCCAAAGGAGGAAGGGGAGG...CAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGGGGCCGGGCTACTCCTaGGGCCCTTCACCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKGPGYS*GPSPGW
Trigger: CCAACCTGGTGAAGGGCCCAAGGAGTAGCCCGGCCC...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGGGCCGGGCTACTCCTaGGGCCCTTCACCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: ALFPSLPSSKCIISARSRGPGYS*GPSPGW
Trigger: CCAACCTGGTGAAGGGCCCAAGGAGTAGCCCGGCCC...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTGTACTCGTGGCCGAGTaGACTGGGGTGGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCVLVAE*TGVGSS
Trigger: TGAGGAGCCCACCCCAGTCAACTCGGCCACGAGTAC...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAAATGGGCTCCTCCTTCTaGAAAAGCTTTCGGGATGGG +
Preference number: 5 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQMGSSF*KSFRDG
Trigger: CCCATCCCGAAAGCTTTTCAAGAAGGAGGAGCCCAT...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAAGGGAGCGTGTGGAGTaGCACTCGGAGATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RKAPISNQARFPFLGVGGRERVE*HSEMEE
Trigger: CTCCTCCATCTCCGAGTGCAACTCCACACGCTCCCT...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAATCCAGCCGTTGCCGGTaGGCAGAAGGACGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQSSRCR*AEGRGR
Trigger: TCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGA...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGTCCAGCCGTTGCCGGTaGGCAGAAGGACGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: ALFPSLPSSKCIISARSRSSRCR*AEGRGR
Trigger: TCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGA...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTAAGCAGGAGTCCAGGTaGCTGGGCGTCTCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPKQESR*LGVSVL
Trigger: CAGCACAGAGACGCCCAGCAACCTGGACTCCTGCTT...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCGTGGTGAGGATGACATaGGCAGACAGCATCAGACAA +
Preference number: 5 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCVVRMT*ADSIRQ
Trigger: TTGTCTGATGCTGTCTGCCAATGTCATCCTCACCAC...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS GCA 90 bp TCTTCTCCTCCTCCTCCCCTTCCTCCTTTGGGACGACTGAGCTCCTaGCCCAGGTTTTGCTGCTTTCACCTGGTGTCAATATGTGCATGT +
Preference number: 5 (lower is better)
Translates to: SSPPPPLPPLGRLSS*PRFCCFHLVSICAC
Trigger: ACATGCACATATTGACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGAGCTCAGTCGTCCCAAAGGAGGAAGGGGAGGAGGAGGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS CCA 90 bp GCATGTATATACACATTGTCGAGGAGAGGTGGCAGAAGTTATGGATaGAGCAAGCCTGGACCAGTCGGTGGCTGGACAGAGCAGGGGACA +
Preference number: 5 (lower is better)
Translates to: ACIYTLSRRGGRSYG*SKPGPVGGWTEQGT
Trigger: TGTCCCCTGCTCTGTCCAGCCACCGACTGGTCCAGGCTTGCTCCATCCATAACTTCTGCCACCTCTCCTCGACAATGTGTATATACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CAA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGCCGCCGCCGCCTATaGTTCATGCGCCTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLSRRRL*FMRLRR
Trigger: TCTGCGGAGGCGCATGAACAATAGGCGGCGGCGGCT...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGGACACCTGCGAGTCCTaGGACAGCACCTCCACCACG +
Preference number: 5 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVDTCES*DSTSTT
Trigger: CGTGGTGGAGGTGCTGTCCAAGGACTCGCAGGTGTC...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGCCTGCCGCACTCATCTaGGTGGTTCGGTGCCATTCC +
Preference number: 5 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWPAALI*VVRCHS
Trigger: GGAATGGCACCGAACCACCAAGATGAGTGCGGCAGG...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTGGGGCACCTGGAAGTGCAGATAGGCAGTGCCAGGTCTATCAAGCCCTATGACCAGTCTTCCATGAGTTaGGCAAAAGGTTCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: VGHLEVQIGSARSIKPYDQSSMS*AKGSGH
Trigger: GTGCCCAGAACCTTTTGCCAAACTCATGGAAGACTG...GTCATAGGGCTTGATAGACCTGGCACTGCCTATCTGCACTTCCAGGTGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGAAAGGGCTGTGCCAGTGGAAGGAGTCCTaGGGCATTTCAAAGAAACCA +
Preference number: 5 (lower is better)
Translates to: VQEVGLDLRGSNPEKGLCQWKES*GISKKP
Trigger: TGGTTTCTTTGAAATGCCCAAGGACTCCTTCCACTG...GCACAGCCCTTTCTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGCGGCTCTTCCTGAACTaGCCCTTGCGTTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: SALSVQEVGLDLRGSNPERLFLN*PLRFFT
Trigger: GGTGAAGAAACGCAAGGGCAAGTTCAGGAAGAGCCG...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGACTCCTGCCCCAGGTTTaGCTGCTTTCACCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: RKAPISNQARFPFLGVGGLLPQV*LLSPGV
Trigger: GACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGAG...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAACTGGGGCTCAACCCATaGCTGGAGGGGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: NHRISNTGVWEAELGADKLGLNP*LEGLLL
Trigger: CAGCAGGAGCCCCTCCAGCAATGGGTTGAGCCCCAG...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCCTGGGGCTCAACCCATaGCTGGAGGGGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLLGLNP*LEGLLL
Trigger: CAGCAGGAGCCCCTCCAGCAATGGGTTGAGCCCCAG...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCTCTGCGCACACCCAAAGAAACTCCAGAGTCTaGGGTCTCTCCAAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: KLNSGLTKGPYDSSAHTQRNSRV*GLSKVE
Trigger: CTCTACCTTGGAGAGACCCAAGACTCTGGAGTTTCT...TTGGGTGTGCGCAGAGCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCCAAGGGTCCAGCCGTaGCCGGTTGGCAGAAGGACG +
Preference number: 5 (lower is better)
Translates to: VALFPSLPSSKCIISARSPRVQP*PVGRRT
Trigger: CGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTGG...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GGCTTAGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGAAGCAGGAGTCCAGGTaGCTGGGCGTCTCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: GLGHRKAPISNQARFPFLKQESR*LGVSVL
Trigger: CAGCACAGAGACGCCCAGCAACCTGGACTCCTGCTT...CAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCTAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGCCACACTGGGCCACCTaGCTTTCAGTCTTCCTGCTA +
Preference number: 5 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGPHWAT*LSVFLL
Trigger: TAGCAGGAAGACTGAAAGCAAGGTGGCCCAGTGTGG...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCGGGACCTCAAGGTTATaGTACATCAGCGGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPGTSRL*YISGSL
Trigger: CAGGGAGCCGCTGATGTACAATAACCTTGAGGTCCC...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS GCA 90 bp TGGTGTCAACTGGATGGCTCGAAGGCGAGGAATGATGGTGGGGCTTaGAGGAGGACTGGAGCGGCTGTTGATAAGACTCTTCCTTTTATC +
Preference number: 5 (lower is better)
Translates to: WCQLDGSKARNDGGA*RRTGAAVDKTLPFI
Trigger: GATAAAAGGAAGAGTCTTATCAACAGCCGCTCCAGTCCTCCTGCAAGCCCCACCATCATTCCTCGCCTTCGAGCCATCCAGTTGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 90 bp AGTCTCACACTGGATGGCTCGAAGGCGAGGAATGATGGTGGGGCTTaGAGGAGGACTGGAGCGGCTGTTGATAAGACTCTTCCTTTTATC +
Preference number: 5 (lower is better)
Translates to: SLTLDGSKARNDGGA*RRTGAAVDKTLPFI
Trigger: GATAAAAGGAAGAGTCTTATCAACAGCCGCTCCAGTCCTCCTGCAAGCCCCACCATCATTCCTCGCCTTCGAGCCATCCAGTGTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CAA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGATGACCAAGCAGAGGTaGGGCTCCTTCAGACATACC +
Preference number: 5 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEMTKQR*GSFRHT
Trigger: GGTATGTCTGAAGGAGCCCAACCTCTGCTTGGTCAT...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CCAGGTGGCCATATGGTATTCTGCTTCATAGCTGTTCTAGGGCATTGCGGTGATTTCCTGAACTTGCCCTaGCGTTTCTTCACCCGGGGC +
Preference number: 5 (lower is better)
Translates to: PGGHMVFCFIAVLGHCGDFLNLP*RFFTRG
Trigger: GCCCCGGGTGAAGAAACGCAAGGGCAAGTTCAGGAA...ATCACCGCAATGCCCTAGAACAGCTATGAAGCAGAATACCATATGGCCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTATGCGGTTGCCATCCTaGAGCTTCAGCCGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCMRLPS*SFSRLF
Trigger: GAAGAGCCGGCTGAAGCTCAAGGATGGCAACCGCAT...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGACCTCCCCTTCCTCCTTaGGGACGACTGAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: EVALFPSLPSSKCIISARPPLPP*GRLSSC
Trigger: GCAGGAGCTCAGTCGTCCCAAAGGAGGAAGGGGAGG...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCCCTCCCCTTCCTCCTTaGGGACGACTGAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLPPLPP*GRLSSC
Trigger: GCAGGAGCTCAGTCGTCCCAAAGGAGGAAGGGGAGG...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTACATTGACCAGGGGGTaGTGGGTACATGGACTCAGG +
Preference number: 5 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPTLTRG*WVHGLR
Trigger: CCTGAGTCCATGTACCCACAACCCCCTGGTCAATGT...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGCGCTCTACTCGGACATaGACCAGGGGGTTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLRSTRT*TRGLWV
Trigger: TACCCACAACCCCCTGGTCAATGTCCGAGTAGAGCG...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTCGCTCTACTCGGACATaGACCAGGGGGTTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCRSTRT*TRGLWV
Trigger: TACCCACAACCCCCTGGTCAATGTCCGAGTAGAGCG...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATTCTGTGCTGGAGCTGTaGGCTGGGGAGGTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDSVLEL*AGEVLR
Trigger: CCGCAGCACCTCCCCAGCCAACAGCTCCAGCACAGA...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGACCACACTGGGCCACCTaGCTTTCAGTCTTCCTGCTA +
Preference number: 5 (lower is better)
Translates to: RKAPISNQARFPFLGVGGPHWAT*LSVFLL
Trigger: TAGCAGGAAGACTGAAAGCAAGGTGGCCCAGTGTGG...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGCCATCTACCAGGGACTaGAGGCCCAAGTGGAAATGT +
Preference number: 5 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGPSTRD*RPKWKC
Trigger: ACATTTCCACTTGGGCCTCAAGTCCCTGGTAGATGG...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS TCA 90 bp GTCCCTGGAGATATGACTGCTTGCAGCAGGGTGTGGATGTCATCTTaGAGAAGCCTTTCCAGTTGCCCAGAGGATTCCTCCTTAGGTGAC +
Preference number: 5 (lower is better)
Translates to: VPGDMTACSRVWMSS*RSLSSCPEDSSLGD
Trigger: GTCACCTAAGGAGGAATCCTCTGGGCAACTGGAAAGGCTTCTTCAAGATGACATCCACACCCTGCTGCAAGCAGTCATATCTCCAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554024.1
CDS GCA 90 bp CGAGTTTGTTCATGGCCACTCCATAAGCGACTGCTAAGCCATCAATaGCTCGAAAGGGCACCTCACCAGTCAGCAACTCCCAAAGTAGCA +
Preference number: 5 (lower is better)
Translates to: RVCSWPLHKRLLSHQ*LERAPHQSATPKVA
Trigger: TGCTACTTTGGGAGTTGCTGACTGGTGAGGTGCCCTTTCGAGGCATTGATGGCTTAGCAGTCGCTTATGGAGTGGCCATGAACAAACTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554024.1
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCGAAGAGCTTGGCCTCTaGGCGAACATTCTCTATGGT +
Preference number: 5 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPEELGL*ANILYG
Trigger: ACCATAGAGAATGTTCGCCAAGAGGCCAAGCTCTTC...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGTGGAGGATCAATATGTaGCTGGACTTAAGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEWRINM*LDLRSR
Trigger: CCGCGACCTTAAGTCCAGCAACATATTGATCCTCCA...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCCTGCCGCACTCATCTaGGTGGTTCGGTGCCATTCC +
Preference number: 5 (lower is better)
Translates to: VALFPSLPSSKCIISARSPAALI*VVRCHS
Trigger: GGAATGGCACCGAACCACCAAGATGAGTGCGGCAGG...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAACCTGCCGCACTCATCTaGGTGGTTCGGTGCCATTCC +
Preference number: 5 (lower is better)
Translates to: NHRISNTGVWEAELGADKPAALI*VVRCHS
Trigger: GGAATGGCACCGAACCACCAAGATGAGTGCGGCAGG...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGCAGTCTTCCATGAGTTaGGCAAAAGGTTCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGQSSMS*AKGSGH
Trigger: GTGCCCAGAACCTTTTGCCAAACTCATGGAAGACTG...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp ACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACAGCCGAAGTTCCTTTTCTTaGGCCCTGAGTTGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: TLVFGKLNSGLTKGPYDSRSSFS*ALSWSN
Trigger: GTTTGACCAACTCAGGGCCAAAGAAAAGGAACTTCG...GCTGTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTTCCTGAACTTGCCCTaGCGTTTCTTCACCCGGGGC +
Preference number: 5 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGFLNLP*RFFTRG
Trigger: GCCCCGGGTGAAGAAACGCAAGGGCAAGTTCAGGAA...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGAGCGTGTGGAGTaGCACTCGGAGATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLRERVE*HSEMEE
Trigger: CTCCTCCATCTCCGAGTGCAACTCCACACGCTCCCT...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AATCACAGAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAAGGGAGCGTGTGGAGTaGCACTCGGAGATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: NHRISNTGVWEAELGADKRERVE*HSEMEE
Trigger: CTCCTCCATCTCCGAGTGCAACTCCACACGCTCCCT...TTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTCTGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGAGGGAGCGTGTGGAGTaGCACTCGGAGATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SLPSSKCIISARSRAGSQRERVE*HSEMEE
Trigger: CTCCTCCATCTCCGAGTGCAACTCCACACGCTCCCT...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCAGGGAGCGTGTGGAGTaGCACTCGGAGATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFRERVE*HSEMEE
Trigger: CTCCTCCATCTCCGAGTGCAACTCCACACGCTCCCT...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCACATTGACCAGGGGGTaGTGGGTACATGGACTCAGG +
Preference number: 5 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSTLTRG*WVHGLR
Trigger: CCTGAGTCCATGTACCCACAACCCCCTGGTCAATGT...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGCGCTCTACTCGGACATaGACCAGGGGGTTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGRSTRT*TRGLWV
Trigger: TACCCACAACCCCCTGGTCAATGTCCGAGTAGAGCG...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTCCATCTACCAGGGACTaGAGGCCCAAGTGGAAATGT +
Preference number: 5 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPPSTRD*RPKWKC
Trigger: ACATTTCCACTTGGGCCTCAAGTCCCTGGTAGATGG...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTGACTTGGTGGGCCCCTaGAACCAAAGTGCTAATGGG +
Preference number: 5 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCDLVGP*NQSANG
Trigger: CCCATTAGCACTTTGGTTCAAGGGGCCCACCAAGTC...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACATACACCCAACTCCCTaGAGAGGAAAGCATGTGATG +
Preference number: 5 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDIHPTP*RGKHVM
Trigger: CATCACATGCTTTCCTCTCAAGGGAGTTGGGTGTAT...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS CCA 90 bp CCTGGTGTCAATATGTGCATGTATATACACATTGTCGAGGAGAGGTaGCAGAAGTTATGGATGGAGCAAGCCTGGACCAGTCGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: PGVNMCMYIHIVEER*QKLWMEQAWTSRWL
Trigger: CAGCCACCGACTGGTCCAGGCTTGCTCCATCCATAACTTCTGCCACCTCTCCTCGACAATGTGTATATACATGCACATATTGACACCAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS-3UTR CAA 90 bp CCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCTATGACGTGATCTTCAGAATCTaGTTGCTCAGGTCTCCATTC +
Preference number: 5 (lower is better)
Translates to: PTLVFGKLNSGLTKGPYDVIFRI*LLRSPF
Trigger: GAATGGAGACCTGAGCAACAAGATTCTGAAGATCAC...GTCATAGGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCCTGCCGCACTCATCTaGGTGGTTCGGTGCCATTCC +
Preference number: 5 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDPAALI*VVRCHS
Trigger: GGAATGGCACCGAACCACCAAGATGAGTGCGGCAGG...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCTGGTGGATGATGATGTaGAGCTCCCGTTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSWWMMM*SSRSRM
Trigger: CATCCTGGAACGGGAGCTCAACATCATCATCCACCA...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGGGACTGGAGCGGCTGTaGATAAGACTCTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: SALSVQEVGLDLRGSNPEGLERL*IRLFLL
Trigger: TAAAAGGAAGAGTCTTATCAACAGCCGCTCCAGTCC...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGGGACTGGAGCGGCTGTaGATAAGACTCTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGGLERL*IRLFLL
Trigger: TAAAAGGAAGAGTCTTATCAACAGCCGCTCCAGTCC...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGCTCCTGCCCCAGGTTTaGCTGCTTTCACCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: ALFPSLPSSKCIISARSRLLPQV*LLSPGV
Trigger: GACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGAG...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCCGTCCCTTCTTCTTaGGGGCCCTCTTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKSVPSS*GPSSPP
Trigger: AGGAGGAGAAGAGGGCCCCAAAGAAGAAGGGACGGA...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTTCCGTCCCTTCTTCTTaGGGGCCCTCTTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: VALFPSLPSSKCIISARSSVPSS*GPSSPP
Trigger: AGGAGGAGAAGAGGGCCCCAAAGAAGAAGGGACGGA...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGTCCGTCCCTTCTTCTTaGGGGCCCTCTTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SLPSSKCIISARSRAGSQSVPSS*GPSSPP
Trigger: AGGAGGAGAAGAGGGCCCCAAAGAAGAAGGGACGGA...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGCCATCTACCAGGGACTaGAGGCCTTCATCTCCCGAG +
Preference number: 5 (lower is better)
Translates to: ALFPSLPSSKCIISARSRPSTRD*RPSSPE
Trigger: CTCGGGAGATGAAGGCCTCAAGTCCCTGGTAGATGG...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
CDS-3UTR CAA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCCCATCTACCAGGGACTaGAGGCCTTCATCTCCCGAG +
Preference number: 5 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLPSTRD*RPSSPE
Trigger: CTCGGGAGATGAAGGCCTCAAGTCCCTGGTAGATGG...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
CDS-3UTR CAA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGATGGGCTCCTCCTTCTaGAAAAGCTTTCGGGATGGG +
Preference number: 5 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLMGSSF*KSFRDG
Trigger: CCCATCCCGAAAGCTTTTCAAGAAGGAGGAGCCCAT...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGCGCTCTACTCGGACATaGACCAGGGGGTTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: ALFPSLPSSKCIISARSRRSTRT*TRGLWV
Trigger: TACCCACAACCCCCTGGTCAATGTCCGAGTAGAGCG...CCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGGGTGGGAGTCAGAGATaGGTTAGGATCTCGTTTGAA +
Preference number: 5 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGGGSQR*VRISFE
Trigger: TTCAAACGAGATCCTAACCAATCTCTGACTCCCACC...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GACCTCCAAGACAAAAGACAGTGGAGCAGCATTCAGAGAGTCTTGAGGGAAGAGACCTGTGCACAGGCCTaGGTCAGTTTTCAGTATGGG +
Preference number: 5 (lower is better)
Translates to: DLQDKRQWSSIQRVLREETCAQA*VSFQYG
Trigger: CCCATACTGAAAACTGACCAAGGCCTGTGCACAGGT...CTCTTCCCTCAAGACTCTCTGAATGCTGCTCCACTGTCTTTTGTCTTGGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCCCAGGAAGGTCAGGGTaGGCCTCTGCTATCCTTCCT +
Preference number: 5 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLPGRSG*ASAILP
Trigger: AGGAAGGATAGCAGAGGCCAACCCTGACCTTCCTGG...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTCTTCCCGTCCAAGACTaGGTGGGCCCCTTGAACCAA +
Preference number: 5 (lower is better)
Translates to: VALFPSLPSSKCIISARSLPVQD*VGPLNQ
Trigger: TTGGTTCAAGGGGCCCACCAAGTCTTGGACGGGAAG...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGATATAGGCAGCATGGTTaGGAGGGCCACAAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: EVALFPSLPSSKCIISARYRQHG*EGHKRA
Trigger: GGCCCTCTTGTGGCCCTCCAAACCATGCTGCCTATA...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAAGCAAAGACCCAGGCTaGCTTTATCTTTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: RKAPISNQARFPFLGVGGSKDPG*LYLSPQ
Trigger: CTGTGGGGAAAGATAAAGCAAGCCTGGGTCTTTGCT...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACAGAAGGAACGTGTCTTaGTGCAAAGGGAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHRRNVS*CKGKAE
Trigger: CTCTGCCTTCCCTTTGCACAAAGACACGTTCCTTCT...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS TCA 90 bp AGAAACCAGACTCCTCTATGGTGGTTAGCTGGTCCAGGATATTCGTaGAAGATGGTCGTGAGTGGGGATCAGGATTCCAGCAGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: RNQTPLWWLAGPGYS*KMVVSGDQDSSSLP
Trigger: TGGAAGACTGCTGGAATCCTGATCCCCACTCACGACCATCTTTCACGAATATCCTGGACCAGCTAACCACCATAGAGGAGTCTGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AATGAGAGACAGCCAACTGTCACTCTGATGTTGCTACCAACCTCCCTCTCTCATATGACCAAGCAGAGGTaGGGCTCCTTCAGACATACC +
Preference number: 5 (lower is better)
Translates to: NERQPTVTLMLLPTSLSHMTKQR*GSFRHT
Trigger: GGTATGTCTGAAGGAGCCCAACCTCTGCTTGGTCAT...ATGAGAGAGGGAGGTTGGTAGCAACATCAGAGTGACAGTTGGCTGTCTCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGTGGAGGATCAATATGTaGCTGGACTTAAGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWWRINM*LDLRSR
Trigger: CCGCGACCTTAAGTCCAGCAACATATTGATCCTCCA...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAATATCCAACACTGGTGTTTGGGAAGCTGAACTCGGGGCTGACAAAGGGACCCGTGATCTTCAGAATCTaGTTGCTCAGGTCTCCATTC +
Preference number: 5 (lower is better)
Translates to: EYPTLVFGKLNSGLTKGPVIFRI*LLRSPF
Trigger: GAATGGAGACCTGAGCAACAAGATTCTGAAGATCAC...GGGTCCCTTTGTCAGCCCCGAGTTCAGCTTCCCAAACACCAGTGTTGGATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTCGAAGTTCCTTTTCTTaGGCCCTGAGTTGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPRSSFS*ALSWSN
Trigger: GTTTGACCAACTCAGGGCCAAAGAAAAGGAACTTCG...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGACGGCTCTTCCTGAACTaGCCCTTGCGTTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: EVALFPSLPSSKCIISARRLFLN*PLRFFT
Trigger: GGTGAAGAAACGCAAGGGCAAGTTCAGGAAGAGCCG...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCCGGCTCTTCCTGAACTaGCCCTTGCGTTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLRLFLN*PLRFFT
Trigger: GGTGAAGAAACGCAAGGGCAAGTTCAGGAAGAGCCG...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGAGGACTGGAGCGGCTGTaGATAAGACTCTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: RKAPISNQARFPFLGVGGGLERL*IRLFLL
Trigger: TAAAAGGAAGAGTCTTATCAACAGCCGCTCCAGTCC...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATTCCGTCCCTTCTTCTTaGGGGCCCTCTTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDSVPSS*GPSSPP
Trigger: AGGAGGAGAAGAGGGCCCCAAAGAAGAAGGGACGGA...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGTGGTTAGGATCTCGTTaGAAGCGCTCTACTCGGACA +
Preference number: 5 (lower is better)
Translates to: DTEKLLSRTKPDSHSWVLWLGSR*KRSTRT
Trigger: TGTCCGAGTAGAGCGCTTCAAACGAGATCCTAACCA...CAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAGAAACTCCAGAGTCTaGGGTCTCTCCAAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSRNSRV*GLSKVE
Trigger: CTCTACCTTGGAGAGACCCAAGACTCTGGAGTTTCT...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGGACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTAGAAACTCCAGAGTCTaGGGTCTCTCCAAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: RTQKSSYLEPSQIPIPGCRNSRV*GLSKVE
Trigger: CTCTACCTTGGAGAGACCCAAGACTCTGGAGTTTCT...ACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTTCAATACTTGCTGGTTaGCCCTTTGCCGAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPSILAG*PFAESF
Trigger: GAAACTCTCGGCAAAGGGCAAACCAGCAAGTATTGA...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CCAGGTGGCCATATGGTATTCTGCTTCATAGCTGTTCTAGGGCATTGCGGTGATACATGGATGGCCCAGTaGAGAGTGAATTCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: PGGHMVFCFIAVLGHCGDTWMAQ*RVNSQV
Trigger: GACTTGGGAATTCACTCTCAACTGGGCCATCCATGT...ATCACCGCAATGCCCTAGAACAGCTATGAAGCAGAATACCATATGGCCACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp AATGAGAGACAGCCAACTGTCACTCTGATGTTGCTACCAACCTCCCTCTCTCATCTGGATGAGTTAGGATaGCTCGGGAGGTGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: NERQPTVTLMLLPTSLSHLDELG*LGRCLL
Trigger: AAGGAGACACCTCCCGAGCAATCCTAACTCATCCAG...ATGAGAGAGGGAGGTTGGTAGCAACATCAGAGTGACAGTTGGCTGTCTCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp AGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTGAGTTGAACCAAGCCTGCTaGGCATCCCTAGTTAACAAT +
Preference number: 5 (lower is better)
Translates to: SALSVQEVGLDLRGSNPELNQAC*ASLVNN
Trigger: ATTGTTAACTAGGGATGCCAAGCAGGCTTGGTTCAA...CTCAGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGATGACCAAGCAGAGGTaGGGCTCCTTCAGACATACC +
Preference number: 5 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKMTKQR*GSFRHT
Trigger: GGTATGTCTGAAGGAGCCCAACCTCTGCTTGGTCAT...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTGGAGGATCAATATGTaGCTGGACTTAAGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGWRINM*LDLRSR
Trigger: CCGCGACCTTAAGTCCAGCAACATATTGATCCTCCA...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GGGTGTTGGGGGACAGCGGAGGAGGACCAAAATCAATCACAGAATATCCAACACGTGATCTTCAGAATCTaGTTGCTCAGGTCTCCATTC +
Preference number: 5 (lower is better)
Translates to: GCWGTAEEDQNQSQNIQHVIFRI*LLRSPF
Trigger: GAATGGAGACCTGAGCAACAAGATTCTGAAGATCAC...GTGTTGGATATTCTGTGATTGATTTTGGTCCTCCTCCGCTGTCCCCCAACACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCCAGTGGAAGGAGTCCTaGGGCATTTCAAAGAAACCA +
Preference number: 5 (lower is better)
Translates to: HLQSALSVQEVGLDLRGSQWKES*GISKKP
Trigger: TGGTTTCTTTGAAATGCCCAAGGACTCCTTCCACTG...GGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATGGGTACCCTCAATACTaGCTGGTTTGCCCTTTGCCG +
Preference number: 5 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDGYPQY*LVCPLP
Trigger: CGGCAAAGGGCAAACCAGCAAGTATTGAGGGTACCC...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCACCAATTCATCACTGTaGCCAGCTGCACATCCAGGC +
Preference number: 5 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLTNSSL*PAAHPG
Trigger: GCCTGGATGTGCAGCTGGCAACAGTGATGAATTGGT...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCTCACAGTAGCACCTTaGGATAGCCCTGCTTTTGCT +
Preference number: 5 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVLTVAP*DSPAFA
Trigger: AGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAG...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp GACCTCCAAGACAAAAGACAGTGGAGCAGCATTCAGAGAGTCTTGAGGGAAGAGAGAAGAGCTACAGAATaGACATGTCCAGCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: DLQDKRQWSSIQRVLREERRATE*TCPAPV
Trigger: CACAGGAGCTGGACATGTCAATTCTGTAGCTCTTCT...CTCTTCCCTCAAGACTCTCTGAATGCTGCTCCACTGTCTTTTGTCTTGGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGCATCACCTCCCTTCTTaGCTACAACTGTGTATCAAA +
Preference number: 5 (lower is better)
Translates to: QKSSYLEPSQIPIPGCWGHHLPS*LQLCIK
Trigger: TTTGATACACAGTTGTAGCAAAGAAGGGAGGTGATG...CCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS CCA 90 bp GTGATCTTCAGAATCTTGTTGCTCAGGTCTCCATTCTCCACCTTCTaGAGGATCAATACCAGGGCAACTTCCAGTCCTGTAAGCTCCATT +
Preference number: 5 (lower is better)
Translates to: VIFRILLLRSPFSTF*RINTRATSSPVSSI
Trigger: AATGGAGCTTACAGGACTGGAAGTTGCCCTGGTATTGATCCTCCAGAAGGTGGAGAATGGAGACCTGAGCAACAAGATTCTGAAGATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554146.1
CDS-3UTR CAA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTGAAGAGCTTGGCCTCTaGGCGAACATTCTCTATGGT +
Preference number: 5 (lower is better)
Translates to: VALFPSLPSSKCIISARSEELGL*ANILYG
Trigger: ACCATAGAGAATGTTCGCCAAGAGGCCAAGCTCTTC...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCCAGTCTTCCATGAGTTaGGCAAAAGGTTCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLQSSMS*AKGSGH
Trigger: GTGCCCAGAACCTTTTGCCAAACTCATGGAAGACTG...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCCAGTCTTCCATGAGTTaGGCAAAAGGTTCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFQSSMS*AKGSGH
Trigger: GTGCCCAGAACCTTTTGCCAAACTCATGGAAGACTG...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CCTCTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCGAAGTTCCTTTTCTTaGGCCCTGAGTTGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: PLKWPCFHPFHLQSALSVRSSFS*ALSWSN
Trigger: GTTTGACCAACTCAGGGCCAAAGAAAAGGAACTTCG...CACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTGGTTAGGATCTCGTTaGAAGCGCTCTACTCGGACA +
Preference number: 5 (lower is better)
Translates to: SGPVSIPSIFKVHYQCKKWLGSR*KRSTRT
Trigger: TGTCCGAGTAGAGCGCTTCAAACGAGATCCTAACCA...CTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCTGGTTAGGATCTCGTTaGAAGCGCTCTACTCGGACA +
Preference number: 5 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFWLGSR*KRSTRT
Trigger: TGTCCGAGTAGAGCGCTTCAAACGAGATCCTAACCA...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp TTCAGTCTTCCTGCTAGCATGAAAGGGCTTAGGACACAGAAAAGCTCCTATCTCTGGTTAGGATCTCGTTaGAAGCGCTCTACTCGGACA +
Preference number: 5 (lower is better)
Translates to: FSLPASMKGLRTQKSSYLWLGSR*KRSTRT
Trigger: TGTCCGAGTAGAGCGCTTCAAACGAGATCCTAACCA...GAGATAGGAGCTTTTCTGTGTCCTAAGCCCTTTCATGCTAGCAGGAAGACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGCATTCAGAGAGTCTaGAGGGAAGAGGGGAATGAC +
Preference number: 5 (lower is better)
Translates to: HPFHLQSALSVQEVGLDLSIQRV*REEGND
Trigger: GTCATTCCCCTCTTCCCTCAAGACTCTCTGAATGCT...GAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp AGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGGGGACTGTCAGAACAAACTTaGTATGTACTTCTCCCCATC +
Preference number: 5 (lower is better)
Translates to: RKAPISNQARFPFLGVGGLSEQT*YVLLPI
Trigger: GATGGGGAGAAGTACATACAAAGTTTGTTCTGACAG...TCCCCCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp GTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTACTGTCACTCTGATGTaGCTACCAACCTCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: VALFPSLPSSKCIISARSTVTLM*LPTSLS
Trigger: AGAGAGGGAGGTTGGTAGCAACATCAGAGTGACAGT...ACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp TTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGGTGATCTTCAGAATCTaGTTGCTCAGGTCTCCATTC +
Preference number: 5 (lower is better)
Translates to: FHLQSALSVQEVGLDLRGVIFRI*LLRSPF
Trigger: GAATGGAGACCTGAGCAACAAGATTCTGAAGATCAC...CCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGCAGTGGAAGGAGTCCTaGGGCATTTCAAAGAAACCA +
Preference number: 5 (lower is better)
Translates to: SLPSSKCIISARSRAGSQQWKES*GISKKP
Trigger: TGGTTTCTTTGAAATGCCCAAGGACTCCTTCCACTG...CTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAACGAAGTTCCTTTTCTTaGGCCCTGAGTTGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQRSSFS*ALSWSN
Trigger: GTTTGACCAACTCAGGGCCAAAGAAAAGGAACTTCG...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAGGACTGGAGCGGCTGTaGATAAGACTCTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: EVALFPSLPSSKCIISARGLERL*IRLFLL
Trigger: TAAAAGGAAGAGTCTTATCAACAGCCGCTCCAGTCC...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGGTGGGAGTCAGAGATaGGTTAGGATCTCGTTTGAA +
Preference number: 5 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQGGSQR*VRISFE
Trigger: TTCAAACGAGATCCTAACCAATCTCTGACTCCCACC...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TCTTCATGGATGCTCACAGTAGCACCTTTGGATAGCCCTGCTTTTGCTTCTTTCTTGCTGGTTTGCCCTTaGCCGAGAGTTTCCAAAAAG +
Preference number: 5 (lower is better)
Translates to: SSWMLTVAPLDSPAFASFLLVCP*PRVSKK
Trigger: CTTTTTGGAAACTCTCGGCAAAGGGCAAACCAGCAA...GAAAGAAGCAAAAGCAGGGCTATCCAAAGGTGCTACTGTGAGCATCCATGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGTGGATAGCCCTGCTTTaGCTTCTTTCAGGTACAATT +
Preference number: 5 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWWIALL*LLSGTI
Trigger: AATTGTACCTGAAAGAAGCAAAAGCAGGGCTATCCA...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp AATGAGAGACAGCCAACTGTCACTCTGATGTTGCTACCAACCTCCCTCTCTCATCCTCTGCTCTTTGCTTaGTTAAAAGTGAGCTGGATG +
Preference number: 5 (lower is better)
Translates to: NERQPTVTLMLLPTSLSHPLLFA*LKVSWM
Trigger: CATCCAGCTCACTTTTAACAAAGCAAAGAGCAGAGG...ATGAGAGAGGGAGGTTGGTAGCAACATCAGAGTGACAGTTGGCTGTCTCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAATTTTAAGTCAGGCTTaGTCTGGGTTGGTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQILSQA*SGLVSR
Trigger: CCTGGACACCAACCCAGACAAAGCCTGACTTAAAAT...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp GAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAGTGATCTTCAGAATCTaGTTGCTCAGGTCTCCATTC +
Preference number: 5 (lower is better)
Translates to: EVALFPSLPSSKCIISARVIFRI*LLRSPF
Trigger: GAATGGAGACCTGAGCAACAAGATTCTGAAGATCAC...TCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCGAAGTTCCTTTTCTTaGGCCCTGAGTTGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDRSSFS*ALSWSN
Trigger: GTTTGACCAACTCAGGGCCAAAGAAAAGGAACTTCG...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS-3UTR CAA 90 bp AGAGTAGTGGCATGGAGAAGACATACACGAGAAAGCTTTAGAGGAAGCTCAACAGGTGGGAGTCAGAGATaGGTTAGGATCTCGTTTGAA +
Preference number: 5 (lower is better)
Translates to: RVVAWRRHTRESFRGSSTGGSQR*VRISFE
Trigger: TTCAAACGAGATCCTAACCAATCTCTGACTCCCACC...TGTTGAGCTTCCTCTAAAGCTTTCTCGTGTATGTCTTCTCCATGCCACTACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATCTCAGGGGGTCCAACCCTACAGTATCTTACATATaGGCTTCACTGAACAAAGAG +
Preference number: 5 (lower is better)
Translates to: QSALSVQEVGLDLRGSNPTVSYI*ASLNKE
Trigger: CTCTTTGTTCAGTGAAGCCAATATGTAAGATACTGT...AGGGTTGGACCCCCTGAGATCCAGCCCTACTTCTTGCACTGATAATGCACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp TTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAAGAAGTAGGGCTGGATAGAAGAATCACTTGGTaGGCTGGAACTGCTGGTAAG +
Preference number: 5 (lower is better)
Translates to: FHPFHLQSALSVQEVGLDRRITW*AGTAGK
Trigger: CTTACCAGCAGTTCCAGCCAACCAAGTGATTCTTCT...ATCCAGCCCTACTTCTTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp AATGAGAGACAGCCAACTGTCACTCTGATGTTGCTACCAACCTCCCTCTCTCATAGAGCCATCAGAGCCTaGGTTTCCACATTCTTAAAT +
Preference number: 5 (lower is better)
Translates to: NERQPTVTLMLLPTSLSHRAIRA*VSTFLN
Trigger: ATTTAAGAATGTGGAAACCAAGGCTCTGATGGCTCT...ATGAGAGAGGGAGGTTGGTAGCAACATCAGAGTGACAGTTGGCTGTCTCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CCAGGTGGCCATATGGTATTCTGCTTCATAGCTGTTCTAGGGCATTGCGGTGATCCTATAAATAGCACTTaGCCACATGCATTTACAGAA +
Preference number: 5 (lower is better)
Translates to: PGGHMVFCFIAVLGHCGDPINST*PHAFTE
Trigger: TTCTGTAAATGCATGTGGCAAAGTGCTATTTATAGG...ATCACCGCAATGCCCTAGAACAGCTATGAAGCAGAATACCATATGGCCACCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp ACACAGAAAAGCTCCTATCTCGAACCAAGCCAGATTCCCATTCCTGGGTGTTGGATTAGGAAAGAATGCTaGTCAACACCAGATGCTATA +
Preference number: 5 (lower is better)
Translates to: TQKSSYLEPSQIPIPGCWIRKEC*STPDAI
Trigger: TATAGCATCTGGTGTTGACAAGCATTCTTTCCTAAT...CCAACACCCAGGAATGGGAATCTGGCTTGGTTCGAGATAGGAGCTTTTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS-3UTR CAA 90 bp CTGAAGTGGCCCTGTTTCCATCCCTTCCATCTTCAAAGTGCATTATCAGTGCAATGTAAGATATCATTGTaGCTATTACTGCTACCACCA +
Preference number: 5 (lower is better)
Translates to: LKWPCFHPFHLQSALSVQCKISL*LLLLPP
Trigger: TGGTGGTAGCAGTAATAGCAACAATGATATCTTACA...TTGCACTGATAATGCACTTTGAAGATGGAAGGGATGGAAACAGGGCCACTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554752.7
CDS GCA 72 bp CTCTGGAGGGCTCCATGGAGCGGCCGATCCATAGGGTaGGGGGCCGCCGCCGCCCGCAGGAGCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: LWRAPWSGRSIG*GAAAARRSRRR
Trigger: GCGGCGGCGGCTCCTGCGGGCGGCGGCGGCCCCGCACCCTATGGATCGGCCGCTCCATGGAGCCCTCCAGAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS CAA 72 bp GGGGCCGCCGCCGCCCGCAGGAGCCGCCGCCGCCTATaGTTCATGCGCCTCCGCAGAGCTGGGAGGACCCCC +
Preference number: 6 (lower is better)
Translates to: GAAAARRSRRRL*FMRLRRAGRTP
Trigger: GGGGGTCCTCCCAGCTCTGCGGAGGCGCATGAACAATAGGCGGCGGCGGCTCCTGCGGGCGGCGGCGGCCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp GCCCCACAGCCGAGCAGAGCCACCTCGCAGCGGCGGTaGTGGGCACCGCCCCGCTTGAGGCTGTTGGTTGGC +
Preference number: 6 (lower is better)
Translates to: APQPSRATSQRR*WAPPRLRLLVG
Trigger: GCCAACCAACAGCCTCAAGCGGGGCGGTGCCCACCACCGCCGCTGCGAGGTGGCTCTGCTCGGCTGTGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp TCGCTAGGCAGCCGAGAAGCGCTCTGGAGGGCTCCATaGAGCGGCCGATCCATAGGGTGCGGGGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: SLGSREALWRAP*SGRSIGCGAAA
Trigger: GGCGGCGGCCCCGCACCCTATGGATCGGCCGCTCCATGGAGCCCTCCAGAGCGCTTCTCGGCTGCCTAGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp AGCAACTGGGGTCCTCGCCGCCGGGCTGGCAGCGGCTaGAGAAGGCGCTGCGCGGGGTCACGTAGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: SNWGPRRRAGSG*RRRCAGSRSCW
Trigger: CCAGCAACTACGTGACCCCGCGCAGCGCCTTCTCCAGCCGCTGCCAGCCCGGCGGCGAGGACCCCAGTTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp CCACAGCCGAGCAGAGCCACCTCGCAGCGGCGGTGGTaGGCACCGCCCCGCTTGAGGCTGTTGGTTGGCGTC +
Preference number: 6 (lower is better)
Translates to: PQPSRATSQRRW*APPRLRLLVGV
Trigger: GACGCCAACCAACAGCCTCAAGCGGGGCGGTGCCCACCACCGCCGCTGCGAGGTGGCTCTGCTCGGCTGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS TCA 72 bp CCACCTCGCAGCGGCGGTGGTGGGCACCGCCCCGCTTaGGGCTGTTGGTTGGCGTCAGCTGAGGGGTACTCG +
Preference number: 6 (lower is better)
Translates to: PPRSGGGGHRPA*GCWLASAEGYS
Trigger: CGAGTACCCCTCAGCTGACGCCAACCAACAGCCTCAAGCGGGGCGGTGCCCACCACCGCCGCTGCGAGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp CAGCGGCGGCGCTCGCTAGGCAGCCGAGAAGCGCTCTaGAGGGCTCCATGGAGCGGCCGATCCATAGGGTGC +
Preference number: 6 (lower is better)
Translates to: QRRRSLGSREAL*RAPWSGRSIGC
Trigger: GCACCCTATGGATCGGCCGCTCCATGGAGCCCTCCAGAGCGCTTCTCGGCTGCCTAGCGAGCGCCGCCGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS GCA 72 bp GCACAGCGGCACGGTGCTGTCCTGACTCTGCCCCTCTaGATCCAGGTCCAGGAGCGTCCGCTCAGTCGGGGG +
Preference number: 6 (lower is better)
Translates to: AQRHGAVLTLPL*IQVQERPLSRG
Trigger: CCCCCGACTGAGCGGACGCTCCTGGACCTGGATGCAGAGGGGCAGAGTCAGGACAGCACCGTGCCGCTGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 72 bp AGCGGCTGGAGAAGGCGCTGCGCGGGGTCACGTAGTTaGTGGGGAAGATGCCCACCCGCTGGTTCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: SGWRRRCAGSRS*WGRCPPAGSAA
Trigger: GGCAGCTGAACCAGCGGGTGGGCATCTTCCCCAGCAACTACGTGACCCCGCGCAGCGCCTTCTCCAGCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp GCGGTGGTGGGCACCGCCCCGCTTGAGGCTGTTGGTTaGCGTCAGCTGAGGGGTACTCGTGGCCGAGTTGAC +
Preference number: 6 (lower is better)
Translates to: AVVGTAPLEAVG*RQLRGTRGRVD
Trigger: GTCAACTCGGCCACGAGTACCCCTCAGCTGACGCCAACCAACAGCCTCAAGCGGGGCGGTGCCCACCACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp TGGAGCTGTTGGCTGGGGAGGTGCTGCGGGCATGGCTaGGGGACACAAACCACCAAGGGTCCAGCCGTTGCC +
Preference number: 6 (lower is better)
Translates to: WSCWLGRCCGHG*GTQTTKGPAVA
Trigger: GGCAACGGCTGGACCCTTGGTGGTTTGTGTCCCCCAGCCATGCCCGCAGCACCTCCCCAGCCAACAGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CAA 90 bp GCTGCGGGCATGGCTGGGGGACACAAACCACCAAGGGTCCAGCCGTaGCCGGTTGGCAGAAGGACGCGGCCGAGGCAGAAACTCCAGAGT +
Preference number: 6 (lower is better)
Translates to: AAGMAGGHKPPRVQP*PVGRRTRPRQKLQS
Trigger: ACTCTGGAGTTTCTGCCTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTGGTGGTTTGTGTCCCCCAGCCATGCCCGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 72 bp TGGCTGGGGGACACAAACCACCAAGGGTCCAGCCGTTaGCGGTTGGCAGAAGGACGCGGCCGAGGCAGAAAC +
Preference number: 6 (lower is better)
Translates to: WLGDTNHQGSSR*RLAEGRGRGRN
Trigger: GTTTCTGCCTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTGGTGGTTTGTGTCCCCCAGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CAA 90 bp TCCCGGGCTGGTGGCTCAGGCTCCTCCAGGGGAAGCAGCTGGCACTaGCCAGCTTCCAGCAAGTCAAACCCTAGGCCTGTGGCTGCCAGA +
Preference number: 6 (lower is better)
Translates to: SRAGGSGSSRGSSWH*PASSKSNPRPVAAR
Trigger: TCTGGCAGCCACAGGCCTAGGGTTTGACTTGCTGGAAGCTGGCAAGTGCCAGCTGCTTCCCCTGGAGGAGCCTGAGCCACCAGCCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS TCA 72 bp GACTTGAGGCCTTCATCTCCCGAGGCAAGCTCCTTCTaGCCAAGCGTCCCTGGCCCCCACGTCCGTCCCTTC +
Preference number: 6 (lower is better)
Translates to: DLRPSSPEASSF*PSVPGPHVRPF
Trigger: GAAGGGACGGACGTGGGGGCCAGGGACGCTTGGTCAGAAGGAGCTTGCCTCGGGAGATGAAGGCCTCAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
CDS CCA 72 bp GGGACACAAACCACCAAGGGTCCAGCCGTTGCCGGTTaGCAGAAGGACGCGGCCGAGGCAGAAACTCCAGAG +
Preference number: 6 (lower is better)
Translates to: GTQTTKGPAVAG*QKDAAEAETPE
Trigger: CTCTGGAGTTTCTGCCTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTGGTGGTTTGTGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp TGCCAGCAAGGCCATCTCCATAAGGCTGGTGAACCCTaGCAGGGCCGGGCTACTCCTTGGGCCCTTCACCAG +
Preference number: 6 (lower is better)
Translates to: CQQGHLHKAGEP*QGRATPWALHQ
Trigger: CTGGTGAAGGGCCCAAGGAGTAGCCCGGCCCTGCCAGGGTTCACCAGCCTTATGGAGATGGCCTTGCTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554146.1
ENST00000555993.6
CDS CAA 72 bp GGGGACACAAACCACCAAGGGTCCAGCCGTTGCCGGTaGGCAGAAGGACGCGGCCGAGGCAGAAACTCCAGA +
Preference number: 6 (lower is better)
Translates to: GDTNHQGSSRCR*AEGRGRGRNSR
Trigger: TCTGGAGTTTCTGCCTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTGGTGGTTTGTGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CAA 72 bp ATGGCTGGGGGACACAAACCACCAAGGGTCCAGCCGTaGCCGGTTGGCAGAAGGACGCGGCCGAGGCAGAAA +
Preference number: 6 (lower is better)
Translates to: MAGGHKPPRVQP*PVGRRTRPRQK
Trigger: TTTCTGCCTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTGGTGGTTTGTGTCCCCCAGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CAA 90 bp GCATGGCTGGGGGACACAAACCACCAAGGGTCCAGCCGTTGCCGGTaGGCAGAAGGACGCGGCCGAGGCAGAAACTCCAGAGTCTTGGGT +
Preference number: 6 (lower is better)
Translates to: AWLGDTNHQGSSRCR*AEGRGRGRNSRVLG
Trigger: ACCCAAGACTCTGGAGTTTCTGCCTCGGCCGCGTCCTTCTGCCAACCGGCAACGGCTGGACCCTTGGTGGTTTGTGTCCCCCAGCCATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 72 bp GTGGCTCAGGCTCCTCCAGGGGAAGCAGCTGGCACTTaGCAGCTTCCAGCAAGTCAAACCCTAGGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: VAQAPPGEAAGT*QLPASQTLGLW
Trigger: CCACAGGCCTAGGGTTTGACTTGCTGGAAGCTGGCAAGTGCCAGCTGCTTCCCCTGGAGGAGCCTGAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 72 bp CATAAGGGGCAGGCCTGTGTGTGTTCAGTTCCGCTCTaGACAGCGGCACGGTGCTGTCCTGACTCTGCCCCT +
Preference number: 6 (lower is better)
Translates to: HKGQACVCSVPL*TAARCCPDSAP
Trigger: AGGGGCAGAGTCAGGACAGCACCGTGCCGCTGTGCAGAGCGGAACTGAACACACACAGGCCTGCCCCTTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp CAGCATGGGCTCCTCCTTCTTGAAAAGCTTTCGGGATaGGGGGCTGGTGCTCCGACGAGGACGGCTGGACCT +
Preference number: 6 (lower is better)
Translates to: QHGLLLLEKLSG*GAGAPTRTAGP
Trigger: AGGTCCAGCCGTCCTCGTCGGAGCACCAGCCCCCCATCCCGAAAGCTTTTCAAGAAGGAGGAGCCCATGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS TCA 72 bp TGGTTGGCGTCAGCTGAGGGGTACTCGTGGCCGAGTTaGCTGGGGTGGGCTCCTCATGGATTCCATCACTGG +
Preference number: 6 (lower is better)
Translates to: WLASAEGYSWPS*LGWAPHGFHHW
Trigger: CCAGTGATGGAATCCATGAGGAGCCCACCCCAGTCAACTCGGCCACGAGTACCCCTCAGCTGACGCCAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 72 bp TGTGTGTGTTCAGTTCCGCTCTGCACAGCGGCACGGTaGTGTCCTGACTCTGCCCCTCTGCATCCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: CVCSVPLCTAAR*CPDSAPLHPGP
Trigger: TGGACCTGGATGCAGAGGGGCAGAGTCAGGACAGCACCGTGCCGCTGTGCAGAGCGGAACTGAACACACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp ACATTCCTGCTCCAGGACTGGGGCTCAACCCATTGCTaGAGGGGCTCCTGCTGGCTAGGAGAGTCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: TFLLQDWGSTHC*RGSCWLGESLA
Trigger: AGCCAGAGACTCTCCTAGCCAGCAGGAGCCCCTCCAGCAATGGGTTGAGCCCCAGTCCTGGAGCAGGAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp AATCAATTTCTAACAACTGAATGGGCGGGTAGCAACTaGGGTCCTCGCCGCCGGGCTGGCAGCGGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: NQFLTTEWAGSN*GPRRRAGSGWR
Trigger: TCTCCAGCCGCTGCCAGCCCGGCGGCGAGGACCCCAGTTGCTACCCGCCCATTCAGTTGTTAGAAATTGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS CAA 72 bp ACAGTGCTGCTACTGCTAGCAAAGCAGGAGTCCAGGTaGCTGGGCGTCTCTGTGCTGGAGCTGTTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: TVLLLLAKQESR*LGVSVLELLAG
Trigger: CCCAGCCAACAGCTCCAGCACAGAGACGCCCAGCAACCTGGACTCCTGCTTTGCTAGCAGTAGCAGCACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 72 bp CCTCCTCCCCTTCCTCCTTTGGGACGACTGAGCTCCTaGCCCAGGTTTTGCTGCTTTCACCTGGTGTCAACT +
Preference number: 6 (lower is better)
Translates to: PPPLPPLGRLSS*PRFCCFHLVST
Trigger: AGTTGACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGAGCTCAGTCGTCCCAAAGGAGGAAGGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381250.8
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp CTCCACGAGGGAATGGGATACAGAGGTAGGACTGGCTaGGTGAATGCTGTAGGCGACTCTCTCCACTCCCTG +
Preference number: 6 (lower is better)
Translates to: LHEGMGYRGRTG*VNAVGDSLHSL
Trigger: CAGGGAGTGGAGAGAGTCGCCTACAGCATTCACCCAGCCAGTCCTACCTCTGTATCCCATTCCCTCGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp CTGGGCCTTCACTGTCCTCATCCTCTTCAATGTCGATaGGCACCACCCAACTGGCTGCCAGCAAGGCCATCT +
Preference number: 6 (lower is better)
Translates to: LGLHCPHPLQCR*APPNWLPARPS
Trigger: AGATGGCCTTGCTGGCAGCCAGTTGGGTGGTGCCCATCGACATTGAAGAGGATGAGGACAGTGAAGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554146.1
ENST00000555993.6
CDS CAA 72 bp GGACAGGTGCCCCTGTGTGTTCTGGCCCCAGCTAATTaGGGAAACAGTCTCACACTGGATGGCTCGAAGGCG +
Preference number: 6 (lower is better)
Translates to: GQVPLCVLAPAN*GNSLTLDGSKA
Trigger: CGCCTTCGAGCCATCCAGTGTGAGACTGTTTCCCAAATTAGCTGGGGCCAGAACACACAGGGGCACCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS TCA 72 bp ACACATCACTGCCTTTGGAAAACATGGAGGCCCGGATaGCTTCGGGTGCCATCCAAGCATACGTCCCTGCCG +
Preference number: 6 (lower is better)
Translates to: THHCLWKTWRPG*LRVPSKHTSLP
Trigger: CGGCAGGGACGTATGCTTGGATGGCACCCGAAGTCATCCGGGCCTCCATGTTTTCCAAAGGCAGTGATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS TCA 72 bp GGGTACATGGACTCAGGGGAGGGGCCTCGACTGGGCTaGCTGGCATCTCATACACGACAATTTCATCGCTGT +
Preference number: 6 (lower is better)
Translates to: GYMDSGEGPRLG*LASHTRQFHRC
Trigger: ACAGCGATGAAATTGTCGTGTATGAGATGCCAGTCAGCCCAGTCGAGGCCCCTCCCCTGAGTCCATGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 72 bp GCCTTTGGAAAACATGGAGGCCCGGATGACTTCGGGTaGCATCCAAGCATACGTCCCTGCCGCACTCATCTT +
Preference number: 6 (lower is better)
Translates to: AFGKHGGPDDFG*HPSIRPCRTHL
Trigger: AAGATGAGTGCGGCAGGGACGTATGCTTGGATGGCACCCGAAGTCATCCGGGCCTCCATGTTTTCCAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS GCA 72 bp CCTCCTCCCCTTCCTCCTTTGGGACGACTGAGCTCCTaGCCCAGGTTTTGCTGCTTTCACCTGGTGTCAATA +
Preference number: 6 (lower is better)
Translates to: PPPLPPLGRLSS*PRFCCFHLVSI
Trigger: TATTGACACCAGGTGAAAGCAGCAAAACCTGGGGCAGGAGCTCAGTCGTCCCAAAGGAGGAAGGGGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS GCA 72 bp ATCCTCTTCAATGTCGATGGGCACCACCCAACTGGCTaGCAGCAAGGCCATCTCCATAAGGCTGGTGAACCC +
Preference number: 6 (lower is better)
Translates to: ILFNVDGHHPTG*QQGHLHKAGEP
Trigger: GGGTTCACCAGCCTTATGGAGATGGCCTTGCTGGCAGCCAGTTGGGTGGTGCCCATCGACATTGAAGAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553414.5
ENST00000554146.1
ENST00000555993.6
CDS CCA 72 bp GACAGGTGCCCCTGTGTGTTCTGGCCCCAGCTAATTTaGGAAACAGTCTCACACTGGATGGCTCGAAGGCGA +
Preference number: 6 (lower is better)
Translates to: DRCPCVFWPQLI*ETVSHWMARRR
Trigger: TCGCCTTCGAGCCATCCAGTGTGAGACTGTTTCCCAAATTAGCTGGGGCCAGAACACACAGGGGCACCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS CCA 72 bp GTTGTGGGTACATGGACTCAGGGGAGGGGCCTCGACTaGGCTGACTGGCATCTCATACACGACAATTTCATC +
Preference number: 6 (lower is better)
Translates to: VVGTWTQGRGLD*ADWHLIHDNFI
Trigger: GATGAAATTGTCGTGTATGAGATGCCAGTCAGCCCAGTCGAGGCCCCTCCCCTGAGTCCATGTACCCACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp GGGGTGGTGAGGGTGACATGGGTGGGAGTCAGAGATTaGTTAGGATCTCGTTTGAAGCGCTCTACTCGGACA +
Preference number: 6 (lower is better)
Translates to: GVVRVTWVGVRD*LGSRLKRSTRT
Trigger: TGTCCGAGTAGAGCGCTTCAAACGAGATCCTAACCAATCTCTGACTCCCACCCATGTCACCCTCACCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CAA 72 bp GGTCCTCCACGAGCAAACTCCATGACCAAGCAGAGGTaGGGCTCCTTCAGACATACCCCTCTTAGGGCAATG +
Preference number: 6 (lower is better)
Translates to: GPPRANSMTKQR*GSFRHTPLRAM
Trigger: CATTGCCCTAAGAGGGGTATGTCTGAAGGAGCCCAACCTCTGCTTGGTCATGGAGTTTGCTCGTGGAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp TTCTGGCCCCAGCTAATTTGGGAAACAGTCTCACACTaGATGGCTCGAAGGCGAGGAATGATGGTGGGGCTT +
Preference number: 6 (lower is better)
Translates to: FWPQLIWETVSH*MARRRGMMVGL
Trigger: AAGCCCCACCATCATTCCTCGCCTTCGAGCCATCCAGTGTGAGACTGTTTCCCAAATTAGCTGGGGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS CAA 72 bp TGGTTAGGATCTCGTTTGAAGCGCTCTACTCGGACATaGACCAGGGGGTTGTGGGTACATGGACTCAGGGGA +
Preference number: 6 (lower is better)
Translates to: WLGSRLKRSTRT*TRGLWVHGLRG
Trigger: TCCCCTGAGTCCATGTACCCACAACCCCCTGGTCAATGTCCGAGTAGAGCGCTTCAAACGAGATCCTAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CAA 90 bp GTGAGGGTGACATGGGTGGGAGTCAGAGATTGGTTAGGATCTCGTTaGAAGCGCTCTACTCGGACATTGACCAGGGGGTTGTGGGTACAT +
Preference number: 6 (lower is better)
Translates to: VRVTWVGVRDWLGSR*KRSTRTLTRGLWVH
Trigger: ATGTACCCACAACCCCCTGGTCAATGTCCGAGTAGAGCGCTTCAAACGAGATCCTAACCAATCTCTGACTCCCACCCATGTCACCCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CAA 72 bp ACATGGGTGGGAGTCAGAGATTGGTTAGGATCTCGTTaGAAGCGCTCTACTCGGACATTGACCAGGGGGTTG +
Preference number: 6 (lower is better)
Translates to: TWVGVRDWLGSR*KRSTRTLTRGL
Trigger: CAACCCCCTGGTCAATGTCCGAGTAGAGCGCTTCAAACGAGATCCTAACCAATCTCTGACTCCCACCCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS TCA 72 bp ACTCCTCTATGGTGGTTAGCTGGTCCAGGATATTCGTaGAAGATGGTCGTGAGTGGGGATCAGGATTCCAGC +
Preference number: 6 (lower is better)
Translates to: TPLWWLAGPGYS*KMVVSGDQDSS
Trigger: GCTGGAATCCTGATCCCCACTCACGACCATCTTTCACGAATATCCTGGACCAGCTAACCACCATAGAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp AGCTGGTCCAGGATATTCGTGAAAGATGGTCGTGAGTaGGGATCAGGATTCCAGCAGTCTTCCATGAGTTTG +
Preference number: 6 (lower is better)
Translates to: SWSRIFVKDGRE*GSGFQQSSMSL
Trigger: CAAACTCATGGAAGACTGCTGGAATCCTGATCCCCACTCACGACCATCTTTCACGAATATCCTGGACCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CAA 72 bp CTACCCAGTGCTTACAAGAGGCAAAGTGTCTCCAGTTaGGTTCAGGCCAGGGCTTACTTACCTTCCATGAGT +
Preference number: 6 (lower is better)
Translates to: LPSAYKRQSVSS*VQARAYLPSMS
Trigger: ACTCATGGAAGGTAAGTAAGCCCTGGCCTGAACCAAACTGGAGACACTTTGCCTCTTGTAAGCACTGGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554024.1
CDS CAA 72 bp AGATATGACTGCTTGCAGCAGGGTGTGGATGTCATCTaGAAGAAGCCTTTCCAGTTGCCCAGAGGATTCCTC +
Preference number: 6 (lower is better)
Translates to: RYDCLQQGVDVI*KKPFQLPRGFL
Trigger: GAGGAATCCTCTGGGCAACTGGAAAGGCTTCTTCAAGATGACATCCACACCCTGCTGCAAGCAGTCATATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554024.1
CDS CAA 90 bp GGCCAAACTCTACCCAGTGCTTACAAGAGGCAAAGTGTCTCCAGTTaGGTTCAGGCCAGGGCTTACTTACCTTCCATGAGTTTGGCAAAA +
Preference number: 6 (lower is better)
Translates to: GQTLPSAYKRQSVSS*VQARAYLPSMSLAK
Trigger: TTTTGCCAAACTCATGGAAGGTAAGTAAGCCCTGGCCTGAACCAAACTGGAGACACTTTGCCTCTTGTAAGCACTGGGTAGAGTTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554024.1
CDS CCA 72 bp AGAATCTTGTTGCTCAGGTCTCCATTCTCCACCTTCTaGAGGATCAATATGTTGCTGGACTTAAGGTCGCGG +
Preference number: 6 (lower is better)
Translates to: RILLLRSPFSTF*RINMLLDLRSR
Trigger: CCGCGACCTTAAGTCCAGCAACATATTGATCCTCCAGAAGGTGGAGAATGGAGACCTGAGCAACAAGATTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381250.8
ENST00000554752.7
ENST00000555993.6
CDS CAA 72 bp CTCCCAGGTGCGAAGTTCCTTTTCTTTGGCCCTGAGTaGGTCAAACATCTCCTGAATCTCGTGTTTCCAGTT +
Preference number: 6 (lower is better)
Translates to: LPGAKFLFFGPE*VKHLLNLVFPV
Trigger: AACTGGAAACACGAGATTCAGGAGATGTTTGACCAACTCAGGGCCAAAGAAAAGGAACTTCGCACCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381250.8
ENST00000553414.5
ENST00000554146.1
ENST00000554752.7
ENST00000555993.6
CDS CCA 72 bp AGCCCAGGACAGTACTGTGTCCAAACAACGGTAAGGTaGGAAGGAAGACGGCATCCTAAAGTAAATTCAAAT +
Preference number: 6 (lower is better)
Translates to: SPGQYCVQTTVR*EGRRHPKVNSN
Trigger: ATTTGAATTTACTTTAGGATGCCGTCTTCCTTCCCACCTTACCGTTGTTTGGACACAGTACTGTCCTGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553414.5
ENST00000554146.1
CDS CCA 72 bp AGAATCTTGTTGCTCAGGTCTCCATTCTCCACCTTCTaGAGGATCAATAATGTTAGAAGCCCAGGACAGTAC +
Preference number: 6 (lower is better)
Translates to: RILLLRSPFSTF*RINNVRSPGQY
Trigger: GTACTGTCCTGGGCTTCTAACATTATTGATCCTCCAGAAGGTGGAGAATGGAGACCTGAGCAACAAGATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS CCA 72 bp AATATGTGCATGTATATACACATTGTCGAGGAGAGGTaGCAGAAGTTATGGATGGAGCAAGCCTGGACCAGT +
Preference number: 6 (lower is better)
Translates to: NMCMYIHIVEER*QKLWMEQAWTS
Trigger: ACTGGTCCAGGCTTGCTCCATCCATAACTTCTGCCACCTCTCCTCGACAATGTGTATATACATGCACATATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553414.5
CDS CAA 90 bp GTGACTGAAACTTTATCTCCTCTTTCAGTAACTGATCTCACAGAATaGGCCAAACTCTACCCAGTGCTTACAAGAGGCAAAGTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: VTETLSPLSVTDLTE*AKLYPVLTRGKVSP
Trigger: TGGAGACACTTTGCCTCTTGTAAGCACTGGGTAGAGTTTGGCCAATTCTGTGAGATCAGTTACTGAAAGAGGAGATAAAGTTTCAGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554024.1
CDS CAA 72 bp ACTTTATCTCCTCTTTCAGTAACTGATCTCACAGAATaGGCCAAACTCTACCCAGTGCTTACAAGAGGCAAA +
Preference number: 6 (lower is better)
Translates to: TLSPLSVTDLTE*AKLYPVLTRGK
Trigger: TTTGCCTCTTGTAAGCACTGGGTAGAGTTTGGCCAATTCTGTGAGATCAGTTACTGAAAGAGGAGATAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554024.1