RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP3K8 (Homo sapiens)

Ensembl gene IDs: ENSG00000107968

Ensembl transcript IDs: ENST00000263056.6, ENST00000375321.1, ENST00000375322.2, ENST00000413724.5, ENST00000415139.5, ENST00000430603.1, ENST00000542547.5

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTaGTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGTGT +
Preference number: 1 (lower is better)
Translates to: TGPLGGTFTGHRRSH*SFENGTIHCTGPLC
Trigger: ACACAGGGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR CCA 90 bp TGGTGCATATCAAATAGCTTCACATGTCAAACACACAGGGCCGCTTaGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGA +
Preference number: 1 (lower is better)
Translates to: WCISNSFTCQTHRAA*RHIHGSQEVTLLLR
Trigger: TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTTTGACATGTGAAGCTATTTGATATGCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR CCA 90 bp CCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCTaGTGCATATCAAATAGCTTCACATGTCAAACACACAGGGCCGCT +
Preference number: 1 (lower is better)
Translates to: PALESRHLRNENLET*CISNSFTCQTHRAA
Trigger: AGCGGCCCTGTGTGTTTGACATGTGAAGCTATTTGATATGCACCAGGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR-3UTR GCA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCCTCCAGGAGATCAATaGTGTCTTAATTTAGAGCAA +
Preference number: 2 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLPPGDQ*CLNLEQ
Trigger: TTGCTCTAAATTAAGACAGCATTGATCTCCTGGAGG...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR-3UTR CCA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTACACACAGGGCCGCTTaGAGGCACATTCACGGGTCA +
Preference number: 2 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQITHRAA*RHIHGS
Trigger: TGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR-3UTR GCA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACACACAGGAGGTCACACTaGTCCTTCGAAAATGGCACC +
Preference number: 2 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATHRRSH*SFENGT
Trigger: GGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR-3UTR TCA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTGACACGATCCTTCTGTaGACTCTCAAATTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQIDTILL*TLKFLP
Trigger: AGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTC...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR-3UTR GCA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAAAACCTTGAGACCTGGTaGATATCAAATAGCTTCACA +
Preference number: 2 (lower is better)
Translates to: RSFCELSNSCLRITSPEKNLETW*ISNSFT
Trigger: TGTGAAGCTATTTGATATGCACCAGGTCTCAAGGTT...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR-3UTR TCA 90 bp AGATGGCTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGAGCAAAGTGCACAGTaGATGAAACAGTCAGCAGAC +
Preference number: 2 (lower is better)
Translates to: RWLLIHQLAIFRTLVQLIEQSAQ*MKQSAD
Trigger: GTCTGCTGACTGTTTCATTCACTGTGCACTTTGCTC...AATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAGCCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR-3UTR CCA 90 bp AGATGGCTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGAGAACCTTGAGACCTaGTGCATATCAAATAGCTTC +
Preference number: 2 (lower is better)
Translates to: RWLLIHQLAIFRTLVQLIENLET*CISNSF
Trigger: GAAGCTATTTGATATGCACCAGGTCTCAAGGTTCTC...AATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAGCCATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR-3UTR GCA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATAGAACTCTCAAATTCCTaGCTTAGAATCACGTCACCT +
Preference number: 2 (lower is better)
Translates to: STFKTSRFECLQHSMYSIELSNS*LRITSP
Trigger: AGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTC...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR-3UTR GCA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATAACTAGTCCAGCTTATTaGTACAATCTTCAAGTTGTT +
Preference number: 2 (lower is better)
Translates to: STFKTSRFECLQHSMYSITSPAY*YNLQVV
Trigger: AACAACTTGAAGATTGTAGCAATAAGCTGGACTAGT...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR GCA 72 bp CTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTaGTCCTTCGAAAATGGCACCATTCACTGTACAGGG +
Preference number: 3 (lower is better)
Translates to: LGGTFTGHRRSH*SFENGTIHCTG
Trigger: CCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR CCA 72 bp TCAAATAGCTTCACATGTCAAACACACAGGGCCGCTTaGAGGCACATTCACGGGTCACAGGAGGTCACACTG +
Preference number: 3 (lower is better)
Translates to: SNSFTCQTHRAA*RHIHGSQEVTL
Trigger: CAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTTTGACATGTGAAGCTATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR-3UTR CAA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCAAACACACAGGGCCGCTaGGAGGCACATTCACGGGTC +
Preference number: 3 (lower is better)
Translates to: QQTRSFCELSNSCLRITSNTQGR*EAHSRV
Trigger: GACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR-3UTR CAA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCAACACACAGGGCCGCTaGGAGGCACATTCACGGGTC +
Preference number: 3 (lower is better)
Translates to: SQIPALESRHLRNENLETNTQGR*EAHSRV
Trigger: GACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
3UTR CCA 72 bp GAATCACGTCACCTGAGAAATGAGAACCTTGAGACCTaGTGCATATCAAATAGCTTCACATGTCAAACACAC +
Preference number: 3 (lower is better)
Translates to: ESRHLRNENLET*CISNSFTCQTH
Trigger: GTGTGTTTGACATGTGAAGCTATTTGATATGCACCAGGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAGCGGAGCGGACGAGTaGGACCCGCGTCGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRSGADE*DPRRPH
Trigger: GTGCGGGCGACGCGGGTCTCACTCGTCCGCTCCGCT...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS-3UTR CCA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGACTGGCTGCAGGCCTGTaGGAGCCGAGCACGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRLAAGL*EPSTPG
Trigger: GCCCGGCGTGCTCGGCTCCCACAGGCCTGCAGCCAG...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000542547.5
CDS-3UTR TCA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCCGTCTGCATGTGGATaGGCGTGGCCCCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLPSACG*AWPPGC
Trigger: ACAGCCTGGGGGCCACGCTCATCCACATGCAGACGG...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTGGTGGGGTGCCCGTCTaGATGTGGATGAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLGGVPV*MWMSVA
Trigger: GGCCACGCTCATCCACATGCAGACGGGCACCCCACC...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAGGTTCGGTGCGATGCTaGCTGCAGGCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRGSVRC*LQACGS
Trigger: GCTCCCACAGGCCTGCAGCCAGCATCGCACCGAACC...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000542547.5
CDS-3UTR TCA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAGTAGGAGGGATAGGCTaGGCGAGGGTAGCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRVGGIG*ARVALH
Trigger: GTGAAGCGCTACCCTCGCTCAGCCTATCCCTCCTAC...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCGTAGGAGGGATAGGCTaGGCGAGGGTAGCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLVGGIG*ARVALH
Trigger: GTGAAGCGCTACCCTCGCTCAGCCTATCCCTCCTAC...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCAGACTCTGACAGCGTaGCTGATCCTCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLQTLTA*LILSGR
Trigger: CCGCCCAGAGAGGATCAGCCACGCTGTCAGAGTCTG...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCGGTGGGGTGCCCGTCTaGATGTGGATGAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPGGVPV*MWMSVA
Trigger: GGCCACGCTCATCCACATGCAGACGGGCACCCCACC...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAACACACAGGGCCGCTTaGAGGCACATTCACGGGTCA +
Preference number: 4 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRTHRAA*RHIHGS
Trigger: TGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCGTCTGCATGTGGATaGGCGTGGCCCCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMAPSACG*AWPPGC
Trigger: ACAGCCTGGGGGCCACGCTCATCCACATGCAGACGG...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTGCCCTGCTCTGCCCCTaGCTCACGGCGTCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIALLCP*LTASEP
Trigger: AGGCTCAGACGCCGTGAGTCAGGGGCAGAGCAGGGC...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCGAAGGTTCGGTGCGATaGTGGCTGCAGGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPEGSVR*WLQACG
Trigger: CCCACAGGCCTGCAGCCAGCATCGCACCGAACCTTC...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTTGCGCCATACAGCTCTaGGATGTTCTCGTGCCGGAA +
Preference number: 4 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLCAIQL*DVLVPE
Trigger: TTCCGGCACGAGAACATCGCAGAGCTGTATGGCGCA...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGATGCGCCATACAGCTCTaGGATGTTCTCGTGCCGGAA +
Preference number: 4 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRCAIQL*DVLVPE
Trigger: TTCCGGCACGAGAACATCGCAGAGCTGTATGGCGCA...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTTTGCATCTGCGGCCTTaGCGCTCCCACGCCGGCCGA +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCLHLRP*RSHAGR
Trigger: TCGGCCGGCGTGGGAGCGCCAAGGCCGCAGATGCAA...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS-3UTR CCA 90 bp ACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGTGTAGAGGCAGCGCTTCACCCAGGGTaGGGTGCCCGTCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: TAPSKMAPFTVQGPCVEAALHPG*GARLHV
Trigger: CACATGCAGACGGGCACCCCACCCTGGGTGAAGCGC...TGCCTCTACACAGGGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCAGCGCTTCACCCAGGGTaGGGTGCCCGTCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMAALHPG*GARLHV
Trigger: CACATGCAGACGGGCACCCCACCCTGGGTGAAGCGC...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCGATGTCTGCTTTGGTTaGATGGCCCCTGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLDVCFG*MAPAQD
Trigger: ATCCTGTGCAGGGGCCATTCAACCAAAGCAGACATC...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTGATGTCTGCTTTGGTTaGATGGCCCCTGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLDVCFG*MAPAQD
Trigger: ATCCTGTGCAGGGGCCATTCAACCAAAGCAGACATC...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp AGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATGCGGCTCTTGGGCGGTaGTTGGGGTTTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RHIHGSQEVTLLLRKWHHAALGR*LGFLSR
Trigger: CCTGGAGAGAAACCCCAATCACCGCCCAAGAGCCGC...ATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp ACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGTGTAGAGGCAGCGGCTCTTGGGCGGTaGTTGGGGTTTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TAPSKMAPFTVQGPCVEAAALGR*LGFLSR
Trigger: CCTGGAGAGAAACCCCAATCACCGCCCAAGAGCCGC...TGCCTCTACACAGGGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACTGGCTGCAGGCCTGTaGGAGCCGAGCACGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSLAAGL*EPSTPG
Trigger: GCCCGGCGTGCTCGGCTCCCACAGGCCTGCAGCCAG...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000542547.5
CDS-3UTR CCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTGCGCTTCACCCAGGGTaGGGTGCCCGTCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCALHPG*GARLHV
Trigger: CACATGCAGACGGGCACCCCACCCTGGGTGAAGCGC...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp AACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCTCTTGGGCGGTGATTaGGGTTTCTCTCCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: NTQGRLEAHSRVTGGHTALLGGD*GFSPGK
Trigger: CTTCCCTGGAGAGAAACCCCAATCACCGCCCAAGAG...AGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTTACTGTTGCTCTTTCTaGAGAGTCTGCGGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLYCCSF*RVCGLG
Trigger: GCCAAGGCCGCAGACTCTCCAGAAAGAGCAACAGTA...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS-3UTR TCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCGTCCCCGAACAAGATTaGAGTAGCCAGCCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPVPEQD*SSQPER
Trigger: GCGCTCTGGCTGGCTACTTCAATCTTGTTCGGGGAC...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTGAAGGTTCGGTGCGATaGTGGCTGCAGGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIEGSVR*WLQACG
Trigger: CCCACAGGCCTGCAGCCAGCATCGCACCGAACCTTC...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000542547.5
CDS-3UTR CCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCGGACCCCAGAGCGTaGCGCGCAGTCCAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSPDPRA*RAVQSG
Trigger: TCCGCTCTGGACTGCGCGCCACGCTCTGGGGTCCGG...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000542547.5
CDS-3UTR CCA 90 bp AACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTGGCTACCTATTCCCCTaGCTTCTTCGCGGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: NTQGRLEAHSRVTGGHTAGYLFP*LLRGKK
Trigger: CTTCTTACCGCGAAGAAGCCAGGGGAATAGGTAGCC...AGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS-3UTR CCA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGACAGCTCTCTCATCCCTaGACTGCAGTCATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRQLSHP*TAVICN
Trigger: ATTGCAGATGACTGCAGTCCAGGGATGAGAGAGCTG...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTGTAGGAGGGATAGGCTaGGCGAGGGTAGCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIVGGIG*ARVALH
Trigger: GTGAAGCGCTACCCTCGCTCAGCCTATCCCTCCTAC...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTGAGCAAAGTGCACAGTaGATGAAACAGTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLEQSAQ*MKQSAD
Trigger: GTCTGCTGACTGTTTCATTCACTGTGCACTTTGCTC...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGATCCAGTGGAGGTGCTTaGTTGTGGATTATGTACAGG +
Preference number: 4 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRSSGGA*LWIMYR
Trigger: CCTGTACATAATCCACAAGCAAGCACCTCCACTGGA...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTCTCATCCCTGGACTaGAGTCATCTGCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLLSSLD*SHLQCL
Trigger: AAGACATTGCAGATGACTGCAGTCCAGGGATGAGAG...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTGTCACTAGTGGCCTaGTGTCAGATGGCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLLSLVA*CQMASN
Trigger: ATTAGAAGCCATCTGACAGCAGGCCACTAGTGACAG...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCCTGGCTGCAGGCCTGTaGGAGCCGAGCACGCCGGGC +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCLAAGL*EPSTPG
Trigger: GCCCGGCGTGCTCGGCTCCCACAGGCCTGCAGCCAG...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CCA 90 bp AACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTAACCATGGTACCTCTTaGCCACTAAGCAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: NTQGRLEAHSRVTGGHTANHGTS*PLSSRD
Trigger: GTCTCTGCTGCTTAGTGGCCAAGAGGTACCATGGTT...AGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTCTTGGGCGGTGATTaGGGTTTCTCTCCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPLLGGD*GFSPGK
Trigger: CTTCCCTGGAGAGAAACCCCAATCACCGCCCAAGAG...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTGTGGCTGATCCTCTCTaGGCGGGTTCAGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCVADPL*AGSGPH
Trigger: ATGAGGCCCTGAACCCGCCCAGAGAGGATCAGCCAC...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCGCCATATTCAAGCGTTaGTGGTCCCCGAACAAGATT +
Preference number: 4 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLAIFKR*WSPNKI
Trigger: AATCTTGTTCGGGGACCACCAACGCTTGAATATGGC...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCAACACACAGGGCCGCTTaGAGGCACATTCACGGGTCA +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMATHRAA*RHIHGS
Trigger: TGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCGAGAGTCTGCGGCCTTaGCGCTCCCACGCCGGCCGA +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETESLRP*RSHAGR
Trigger: TCGGCCGGCGTGGGAGCGCCAAGGCCGCAGACTCTC...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS-3UTR TCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCGTCTGCATGTGGATaGGCGTGGCCCCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSPSACG*AWPPGC
Trigger: ACAGCCTGGGGGCCACGCTCATCCACATGCAGACGG...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCAGAGAGCGTTGCCTCTTaGGCATCTCAGATTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMAESVAS*ASQIPR
Trigger: CCGAGGAATCTGAGATGCTCAAGAGGCAACGCTCTC...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTGTCCCCGAACAAGATTaGAGTAGCCAGCCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCVPEQD*SSQPER
Trigger: GCGCTCTGGCTGGCTACTTCAATCTTGTTCGGGGAC...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCCCCGAAGGTTCGGTaGGATGCTGGCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSPPKVR*DAGCRP
Trigger: AGGCCTGCAGCCAGCATCGCACCGAACCTTCGGGGG...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCTCTGCGATGTTCTCGTaGCGGAAGCAAGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPSAMFS*RKQAWI
Trigger: AATCCAGGCTTGCTTCCGGCACGAGAACATCGCAGA...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCATTCACCCCACAGGACTaGGCCATACAGCTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMAFTPQD*AIQLCD
Trigger: ATCGCAGAGCTGTATGGCGCAGTCCTGTGGGGTGAA...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCAGACCCTCCCTCGCCTaGTTCCATAAAGAGATGGAC +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPRPSLA*FHKEMD
Trigger: GTCCATCTCTTTATGGAAGCAGGCGAGGGAGGGTCT...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCAACGCTCAGACCGCCCTaGTCTGCCCCTGACTCACGG +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSTLRPP*SAPDSR
Trigger: CCGTGAGTCAGGGGCAGAGCAGGGCGGTCTGAGCGT...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS-3UTR CCA 90 bp AACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTTGCAATGTCTTCCAGTaGAGGTGCTTGCTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: NTQGRLEAHSRVTGGHTACNVFQ*RCLLVD
Trigger: ATCCACAAGCAAGCACCTCCACTGGAAGACATTGCA...AGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACACACAGGGCCGCTTaGAGGCACATTCACGGGTCA +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCTHRAA*RHIHGS
Trigger: TGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAGCTGCTTTGTATGCATaGGTGAGAAAAGTACTGAGT +
Preference number: 4 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRAALYA*VRKVLS
Trigger: ACTCAGTACTTTTCTCACTCATGCATACAAAGCAGC...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS-3UTR TCA 90 bp AGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATGATGTCTGCTTTGGTTaGATGGCCCCTGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: RHIHGSQEVTLLLRKWHHDVCFG*MAPAQD
Trigger: ATCCTGTGCAGGGGCCATTCAACCAAAGCAGACATC...ATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCAGCGGCTCTTGGGCGGTaGTTGGGGTTTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSAALGR*LGFLSR
Trigger: CCTGGAGAGAAACCCCAATCACCGCCCAAGAGCCGC...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTGAGAGCGTTGCCTCTTaGGCATCTCAGATTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIESVAS*ASQIPR
Trigger: CCGAGGAATCTGAGATGCTCAAGAGGCAACGCTCTC...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTCTGACTCACGGCGTCTaGGCCTGCCCAGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQILTHGV*ACPGAA
Trigger: CGCCGCCCCTGGGCAGGCTCAGACGCCGTGAGTCAG...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS-3UTR GCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTTTCACCCCACAGGACTaGGCCATACAGCTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCFTPQD*AIQLCD
Trigger: ATCGCAGAGCTGTATGGCGCAGTCCTGTGGGGTGAA...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp ACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGTGTAGAGGCAAGACCCTCCCTCGCCTaGTTCCATAAAGAGATGGAC +
Preference number: 4 (lower is better)
Translates to: TAPSKMAPFTVQGPCVEARPSLA*FHKEMD
Trigger: GTCCATCTCTTTATGGAAGCAGGCGAGGGAGGGTCT...TGCCTCTACACAGGGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCTGGACTGCAGTCATCTaGAATGTCTTCCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPWTAVI*NVFQWR
Trigger: CCTCCACTGGAAGACATTGCAGATGACTGCAGTCCA...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACACAGGAGGTCACACTaGTCCTTCGAAAATGGCACC +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMAHRRSH*SFENGT
Trigger: GGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCTTGCATCTGCGGCCTTaGCGCTCCCACGCCGGCCGA +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCLHLRP*RSHAGR
Trigger: TCGGCCGGCGTGGGAGCGCCAAGGCCGCAGATGCAA...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CCA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTGGGTTCATAAACTGCTaGCTCTTCACTTGCATAAAG +
Preference number: 4 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLGFINC*LFTCIK
Trigger: CTTTATGCAAGTGAAGAGCCAGCAGTTTATGAACCC...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCATCTGCTTTGGTTGAATaGCCCCTGCACAGGATGACC +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMASALVE*PLHRMT
Trigger: GGTCATCCTGTGCAGGGGCCATTCAACCAAAGCAGA...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp ACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGTGTAGAGGCATCTGCTTTGGTTGAATaGCCCCTGCACAGGATGACC +
Preference number: 4 (lower is better)
Translates to: TAPSKMAPFTVQGPCVEASALVE*PLHRMT
Trigger: GGTCATCCTGTGCAGGGGCCATTCAACCAAAGCAGA...TGCCTCTACACAGGGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAAGTGCCCGTCTGCATGTaGATGAGCGTGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RSFCELSNSCLRITSPEKVPVCM*MSVAPR
Trigger: CCTGGGGGCCACGCTCATCCACATGCAGACGGGCAC...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCGTGCCCGTCTGCATGTaGATGAGCGTGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETVPVCM*MSVAPR
Trigger: CCTGGGGGCCACGCTCATCCACATGCAGACGGGCAC...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTCTCTTGGGCGGTGATTaGGGTTTCTCTCCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCLLGGD*GFSPGK
Trigger: CTTCCCTGGAGAGAAACCCCAATCACCGCCCAAGAG...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTATATTCAAGCGTTGGTaGTCCCCGAACAAGATTGAA +
Preference number: 4 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLIFKRW*SPNKIE
Trigger: TTCAATCTTGTTCGGGGACCACCAACGCTTGAATAT...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCATATTCAAGCGTTGGTaGTCCCCGAACAAGATTGAA +
Preference number: 4 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLIFKRW*SPNKIE
Trigger: TTCAATCTTGTTCGGGGACCACCAACGCTTGAATAT...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCCCCCCGAAGGTTCGGTaGGATGCTGGCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCPPKVR*DAGCRP
Trigger: AGGCCTGCAGCCAGCATCGCACCGAACCTTCGGGGG...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR GCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTTCTGCGATGTTCTCGTaGCGGAAGCAAGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCSAMFS*RKQAWI
Trigger: AATCCAGGCTTGCTTCCGGCACGAGAACATCGCAGA...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCTCCAGTGGAGGTGCTTaGTTGTGGATTATGTACAGG +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPSSGGA*LWIMYR
Trigger: CCTGTACATAATCCACAAGCAAGCACCTCCACTGGA...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTCTCATCCCTGGACTaGAGTCATCTGCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPLSSLD*SHLQCL
Trigger: AAGACATTGCAGATGACTGCAGTCCAGGGATGAGAG...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCTCTCAGATTCCTCGGTaGTTCCTGTGCACGAAGAAT +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPSQIPR*FLCTKN
Trigger: ATTCTTCGTGCACAGGAAGCACCGAGGAATCTGAGA...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGACCTCCAGGAGATCAATaGTGTCTTAATTTAGAGCAA +
Preference number: 4 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRPPGDQ*CLNLEQ
Trigger: TTGCTCTAAATTAAGACAGCATTGATCTCCTGGAGG...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTCACAGGAGGTCACACTaGTCCTTCGAAAATGGCACC +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCHRRSH*SFENGT
Trigger: GGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCATCTTTCTGGAGAGTCTaGGGCCTTGGCGCTCCCACG +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSSFWRV*GLGAPT
Trigger: CGTGGGAGCGCCAAGGCCGCAGACTCTCCAGAAAGA...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS-3UTR CCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCGGTTCGGTGCGATGCTaGCTGCAGGCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCGSVRC*LQACGS
Trigger: GCTCCCACAGGCCTGCAGCCAGCATCGCACCGAACC...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CCA 90 bp ACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGTGTAGAGGCAAACCATGGTACCTCTTaGCCACTAAGCAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: TAPSKMAPFTVQGPCVEANHGTS*PLSSRD
Trigger: GTCTCTGCTGCTTAGTGGCCAAGAGGTACCATGGTT...TGCCTCTACACAGGGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACAGACTCTGACAGCGTaGCTGATCCTCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSQTLTA*LILSGR
Trigger: CCGCCCAGAGAGGATCAGCCACGCTGTCAGAGTCTG...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGCTCCTTCGAAAATaGCACCATTCACTGTACAGG +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPLLLRK*HHSLYR
Trigger: CCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAG...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp AACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTGAGAACCTTGAGACCTaGTGCATATCAAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: NTQGRLEAHSRVTGGHTAENLET*CISNSF
Trigger: GAAGCTATTTGATATGCACCAGGTCTCAAGGTTCTC...AGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCAGAGCAAAGTGCACAGTaGATGAAACAGTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMAEQSAQ*MKQSAD
Trigger: GTCTGCTGACTGTTTCATTCACTGTGCACTTTGCTC...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCGAAGGTTCGGTGCGATaGTGGCTGCAGGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCEGSVR*WLQACG
Trigger: CCCACAGGCCTGCAGCCAGCATCGCACCGAACCTTC...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR GCA 90 bp AGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTTCAAGCTCATAAAGTaGTCAGTGCAGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RHIHGSQEVTLLLRKWHHFKLIK*SVQCQG
Trigger: CCCCTGACACTGCACTGAGCACTTTATGAGCTTGAA...ATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS-3UTR GCA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTAGTCCCTTGAGAACATaGTTTGTCACCCAAATAATT +
Preference number: 4 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLSPLRT*FVTQII
Trigger: AATTATTTGGGTGACAAAGCATGTTCTCAAGGGACT...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp ACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGTGTAGAGGCATCCAGTGGAGGTGCTTaGTTGTGGATTATGTACAGG +
Preference number: 4 (lower is better)
Translates to: TAPSKMAPFTVQGPCVEASSGGA*LWIMYR
Trigger: CCTGTACATAATCCACAAGCAAGCACCTCCACTGGA...TGCCTCTACACAGGGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTTGGACTGCAGTCATCTaGAATGTCTTCCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIWTAVI*NVFQWR
Trigger: CCTCCACTGGAAGACATTGCAGATGACTGCAGTCCA...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTCCTCGGTGCTTCCTGTaGACGAAGAATCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIPRCFL*TKNQQC
Trigger: ACATTGCTGATTCTTCGTGCACAGGAAGCACCGAGG...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp AGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCTCAGATTCCTCGGTaGTTCCTGTGCACGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RHIHGSQEVTLLLRKWHHSQIPR*FLCTKN
Trigger: ATTCTTCGTGCACAGGAAGCACCGAGGAATCTGAGA...ATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp ACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGTGTAGAGGCACTGTCACTAGTGGCCTaGTGTCAGATGGCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: TAPSKMAPFTVQGPCVEALSLVA*CQMASN
Trigger: ATTAGAAGCCATCTGACAGCAGGCCACTAGTGACAG...TGCCTCTACACAGGGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp AGATGGCTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTCCGGACCCCAGAGCGTaGCGCGCAGTCCAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: RWLLIHQLAIFRTLVQLIPDPRA*RAVQSG
Trigger: TCCGCTCTGGACTGCGCGCCACGCTCTGGGGTCCGG...AATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAGCCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000542547.5
CDS-3UTR CCA 90 bp AACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTTACTGTCTTGACACATaGTCATTAGACTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: NTQGRLEAHSRVTGGHTAYCLDT*SLDWVH
Trigger: ATGAACCCAGTCTAATGACCATGTGTCAAGACAGTA...AGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTAACCATGGTACCTCTTaGCCACTAAGCAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLINHGTS*PLSSRD
Trigger: GTCTCTGCTGCTTAGTGGCCAAGAGGTACCATGGTT...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAGCAGTGTTGGATATATaGTTTGCAAAAGCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRAVLDI*FAKASK
Trigger: TTTGCTTGCTTTTGCAAACCATATATCCAACACTGC...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCATGCAATGTCTTCCAGTaGAGGTGCTTGCTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMACNVFQ*RCLLVD
Trigger: ATCCACAAGCAAGCACCTCCACTGGAAGACATTGCA...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTAATTTAGAGCAAACATaGCATCCTTCAGCCATATTC +
Preference number: 4 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLNLEQT*HPSAIF
Trigger: GAATATGGCTGAAGGATGCCATGTTTGCTCTAAATT...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCACAGTTCCATATCTaGCTGATGACAACCATGGTA +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMAPQFHI*LMTTMV
Trigger: TACCATGGTTGTCATCAGTCAGATATGGAACTGTGG...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTGACACGATCCTTCTGTaGACTCTCAAATTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIDTILL*TLKFLP
Trigger: AGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTC...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTGAGCAAAGTGCACAGTaGATGAAACAGTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCEQSAQ*MKQSAD
Trigger: GTCTGCTGACTGTTTCATTCACTGTGCACTTTGCTC...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp AACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTTGTGTCATTTTTAGCTaGTTTGTATGCATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: NTQGRLEAHSRVTGGHTACVIFS*FVCMSE
Trigger: CTCACTCATGCATACAAAGCAGCTAAAAATGACACA...AGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCACTGGGTTCATAAACTaGTGGCTCTTCACTTGCATA +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPTGFIN*WLFTCI
Trigger: TATGCAAGTGAAGAGCCAGCAGTTTATGAACCCAGT...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCGTCTTTATATCTTGTaGCAAGTATACCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLRLYIL*QVYLSK
Trigger: TTTGGAAAGGTATACTTGGCACAAGATATAAAGACG...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCATACTCAGCAGCCTCTTaGGCTCCAAGAGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSYSAAS*APRGQS
Trigger: ACTCTGCCCTCTTGGAGCGCAAGAGGCTGCTGAGTA...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCGAACTCTCAAATTCCTaGCTTAGAATCACGTCACCT +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPELSNS*LRITSP
Trigger: AGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTC...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTACTGAGTCAGACTCCTaGCTTTGCAGATACTGCGTT +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLITESDS*LCRYCV
Trigger: AACGCAGTATCTGCAAAGCCAGGAGTCTGACTCAGT...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS-3UTR CCA 90 bp AACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCTTAAATTGATCTACTaGGATCAGTTTACACGCCAT +
Preference number: 4 (lower is better)
Translates to: NTQGRLEAHSRVTGGHTALKLIY*DQFTRH
Trigger: ATGGCGTGTAAACTGATCCCAGTAGATCAATTTAAG...AGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTGTGCCCGTCTGCATGTaGATGAGCGTGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQIVPVCM*MSVAPR
Trigger: CCTGGGGGCCACGCTCATCCACATGCAGACGGGCAC...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTTGCAATGTCTTCCAGTaGAGGTGCTTGCTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCCNVFQ*RCLLVD
Trigger: ATCCACAAGCAAGCACCTCCACTGGAAGACATTGCA...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTGCCATATTCAAGCGTTaGTGGTCCCCGAACAAGATT +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIAIFKR*WSPNKI
Trigger: AATCTTGTTCGGGGACCACCAACGCTTGAATATGGC...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTTTTGACCAACCACATTaGACAAAAGTATTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLFDQPH*TKVLGF
Trigger: AAAACCCAATACTTTTGTCCAATGTGGTTGGTCAAA...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCTTTGACCAACCACATTaGACAAAAGTATTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLFDQPH*TKVLGF
Trigger: AAAACCCAATACTTTTGTCCAATGTGGTTGGTCAAA...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTGAAAATCAAGTCCCTTaGGAACATGCTTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIENQVP*EHALSP
Trigger: GGGTGACAAAGCATGTTCTCAAGGGACTTGATTTTC...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCGAGAGCGTTGCCTCTTaGGCATCTCAGATTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETESVAS*ASQIPR
Trigger: CCGAGGAATCTGAGATGCTCAAGAGGCAACGCTCTC...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCAACTGGGTTCATAAACTaGTGGCTCTTCACTTGCATA +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMATGFIN*WLFTCI
Trigger: TATGCAAGTGAAGAGCCAGCAGTTTATGAACCCAGT...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCTACTCAGCAGCCTCTTaGGCTCCAAGAGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETYSAAS*APRGQS
Trigger: ACTCTGCCCTCTTGGAGCGCAAGAGGCTGCTGAGTA...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTACATCTTCGGTCATTTaGACACTTAGGCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLITSSVI*TLRPKS
Trigger: GGATTTTGGCCTAAGTGTTCAAATGACCGAAGATGT...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGAATTTATTCAGTTaGTTTGACCAACCACATTGG +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPLNLFS*FDQPHW
Trigger: CCAATGTGGTTGGTCAAATCAACTGAATAAATTCAG...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCATATTGTCACTTCCAGTaGTCATGTACTCCATTACTG +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMAYCHFQ*SCTPLL
Trigger: CAGTAATGGAGTACATGAGCACTGGAAGTGACAATA...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAAAGACCCTCCCTCGCCTaGTTCCATAAAGAGATGGAC +
Preference number: 4 (lower is better)
Translates to: RSFCELSNSCLRITSPEKRPSLA*FHKEMD
Trigger: GTCCATCTCTTTATGGAAGCAGGCGAGGGAGGGTCT...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCAGTCCCTTGAGAACATaGTTTGTCACCCAAATAATT +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPSPLRT*FVTQII
Trigger: AATTATTTGGGTGACAAAGCATGTTCTCAAGGGACT...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTGAACTCTCAAATTCCTaGCTTAGAATCACGTCACCT +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIELSNS*LRITSP
Trigger: AGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTC...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACATGGTCATTAGACTaGGTTCATAAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCTWSLD*VHKLLA
Trigger: AGCCAGCAGTTTATGAACCCAGTCTAATGACCATGT...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTACATGGTCATTAGACTaGGTTCATAAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLITWSLD*VHKLLA
Trigger: AGCCAGCAGTTTATGAACCCAGTCTAATGACCATGT...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACAGCTCTCTCATCCCTaGACTGCAGTCATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSQLSHP*TAVICN
Trigger: ATTGCAGATGACTGCAGTCCAGGGATGAGAGAGCTG...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTTGGCCTGCTGTCAGATaGCTTCTAATTCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCWPAVR*LLIHQL
Trigger: TAACTGATGAATTAGAAGCCATCTGACAGCAGGCCA...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTCCTCCAGGAGATCAATaGTGTCTTAATTTAGAGCAA +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCPPGDQ*CLNLEQ
Trigger: TTGCTCTAAATTAAGACAGCATTGATCTCCTGGAGG...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCACTAGTCCAGCTTATTaGTACAATCTTCAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPTSPAY*YNLQVV
Trigger: AACAACTTGAAGATTGTAGCAATAAGCTGGACTAGT...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCTACGATATTTGTATTTaGATTCAAGACCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPYDICI*IQDPWE
Trigger: TTCCCATGGGTCTTGAATGCAAATACAAATATCGTA...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375321.1
CDS-3UTR CCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCGGCTACCTATTCCCCTaGCTTCTTCGCGGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCGYLFP*LLRGKK
Trigger: CTTCTTACCGCGAAGAAGCCAGGGGAATAGGTAGCC...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CCA 90 bp ACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGTGTAGAGGCAGCAGTGTTGGATATATaGTTTGCAAAAGCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: TAPSKMAPFTVQGPCVEAAVLDI*FAKASK
Trigger: TTTGCTTGCTTTTGCAAACCATATATCCAACACTGC...TGCCTCTACACAGGGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp AGATGGCTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGTGGCTGATCCTCTCTaGGCGGGTTCAGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: RWLLIHQLAIFRTLVQLIVADPL*AGSGPH
Trigger: ATGAGGCCCTGAACCCGCCCAGAGAGGATCAGCCAC...AATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAGCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp AGATGGCTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTCAGACTCTGACAGCGTaGCTGATCCTCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: RWLLIHQLAIFRTLVQLIQTLTA*LILSGR
Trigger: CCGCCCAGAGAGGATCAGCCACGCTGTCAGAGTCTG...AATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAGCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCAGCCATATTCAAGCGTTaGTGGTCCCCGAACAAGATT +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSAIFKR*WSPNKI
Trigger: AATCTTGTTCGGGGACCACCAACGCTTGAATATGGC...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCAGAAAATCAAGTCCCTTaGGAACATGCTTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSENQVP*EHALSP
Trigger: GGGTGACAAAGCATGTTCTCAAGGGACTTGATTTTC...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAAGACACGATCCTTCTGTaGACTCTCAAATTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RSFCELSNSCLRITSPEKDTILL*TLKFLP
Trigger: AGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTC...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTCTGAATTTATTCAGTTaGTTTGACCAACCACATTGG +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLILNLFS*FDQPHW
Trigger: CCAATGTGGTTGGTCAAATCAACTGAATAAATTCAG...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTCTGAATTTATTCAGTTaGTTTGACCAACCACATTGG +
Preference number: 4 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCLNLFS*FDQPHW
Trigger: CCAATGTGGTTGGTCAAATCAACTGAATAAATTCAG...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATCAGACTCCTGGCTTTaGAGATACTGCGTTAGCTTC +
Preference number: 4 (lower is better)
Translates to: RSFCELSNSCLRITSPEKSDSWL*RYCVSF
Trigger: GAAGCTAACGCAGTATCTGCAAAGCCAGGAGTCTGA...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS-3UTR GCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTAGTCCCTTGAGAACATaGTTTGTCACCCAAATAATT +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLISPLRT*FVTQII
Trigger: AATTATTTGGGTGACAAAGCATGTTCTCAAGGGACT...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATCTCAGATTCCTCGGTaGTTCCTGTGCACGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RSFCELSNSCLRITSPEKSQIPR*FLCTKN
Trigger: ATTCTTCGTGCACAGGAAGCACCGAGGAATCTGAGA...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCAACTAGTCCAGCTTATTaGTACAATCTTCAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMATSPAY*YNLQVV
Trigger: AACAACTTGAAGATTGTAGCAATAAGCTGGACTAGT...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATCTGCAAACAAGATGTaGCTACCTATTCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RSFCELSNSCLRITSPEKSANKM*LPIPLA
Trigger: AGCCAGGGGAATAGGTAGCCACATCTTGTTTGCAGA...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS-3UTR CCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCAACCATGGTACCTCTTaGCCACTAAGCAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCNHGTS*PLSSRD
Trigger: GTCTCTGCTGCTTAGTGGCCAAGAGGTACCATGGTT...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTCTTAAATTGATCTACTaGGATCAGTTTACACGCCAT +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLILKLIY*DQFTRH
Trigger: ATGGCGTGTAAACTGATCCCAGTAGATCAATTTAAG...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCGCTTCCATAAAGAGATaGACAGTTTCACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETASIKR*TVSPHR
Trigger: CCTGTGGGGTGAAACTGTCCATCTCTTTATGGAAGC...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATAGTGGCTGATCCTCTCTaGGCGGGTTCAGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: STFKTSRFECLQHSMYSIVADPL*AGSGPH
Trigger: ATGAGGCCCTGAACCCGCCCAGAGAGGATCAGCCAC...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTAATTTAGAGCAAACATaGCATCCTTCAGCCATATTC +
Preference number: 4 (lower is better)
Translates to: PLCRGSRTSLQEINAVLINLEQT*HPSAIF
Trigger: GAATATGGCTGAAGGATGCCATGTTTGCTCTAAATT...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCCCACAGTTCCATATCTaGCTGATGACAACCATGGTA +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETPQFHI*LMTTMV
Trigger: TACCATGGTTGTCATCAGTCAGATATGGAACTGTGG...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCCACATAGCACCCAACTaGTCGGAAAGAAACGTACCA +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCHIAPN*SERNVP
Trigger: TGGTACGTTTCTTTCCGATCAGTTGGGTGCTATGTG...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR GCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCTCAGACTCCTGGCTTTaGAGATACTGCGTTAGCTTC +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCSDSWL*RYCVSF
Trigger: GAAGCTAACGCAGTATCTGCAAAGCCAGGAGTCTGA...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR GCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCTTCAAGCTCATAAAGTaGTCAGTGCAGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCFKLIK*SVQCQG
Trigger: CCCCTGACACTGCACTGAGCACTTTATGAGCTTGAA...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR GCA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACATGCGCCATACAGCTCTaGGATGTTCTCGTGCCGGAA +
Preference number: 4 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATCAIQL*DVLVPE
Trigger: TTCCGGCACGAGAACATCGCAGAGCTGTATGGCGCA...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACATTCACCCCACAGGACTaGGCCATACAGCTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATFTPQD*AIQLCD
Trigger: ATCGCAGAGCTGTATGGCGCAGTCCTGTGGGGTGAA...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCGTACTCCATTACTGTTaGTCTTTCTGGAGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETVLHYC*SFWRVC
Trigger: GCAGACTCTCCAGAAAGAGCAACAGTAATGGAGTAC...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS-3UTR CCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCTCTGCAAACAAGATGTaGCTACCTATTCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCSANKM*LPIPLA
Trigger: AGCCAGGGGAATAGGTAGCCACATCTTGTTTGCAGA...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCACTGAGTCAGACTCCTaGCTTTGCAGATACTGCGTT +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCTESDS*LCRYCV
Trigger: AACGCAGTATCTGCAAAGCCAGGAGTCTGACTCAGT...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CCA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTTCTGCTTTGGTTGAATaGCCCCTGCACAGGATGACC +
Preference number: 4 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQISALVE*PLHRMT
Trigger: GGTCATCCTGTGCAGGGGCCATTCAACCAAAGCAGA...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCCCACAGTTCCATATCTaGCTGATGACAACCATGGTA +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCPQFHI*LMTTMV
Trigger: TACCATGGTTGTCATCAGTCAGATATGGAACTGTGG...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR TCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCCCACTCTGCATTAAATaGAGCTGCAGTAGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCPLCIK*SCSRKA
Trigger: AGCTTTCCTACTGCAGCTTCATTTAATGCAGAGTGG...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR GCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCGCTTCCTTTCTTATCTaGAAACAAGATGTGGCTACC +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETASFLI*KQDVAT
Trigger: GGTAGCCACATCTTGTTTGCAGATAAGAAAGGAAGC...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS-3UTR GCA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAAGTACTCCATTACTGTTaGTCTTTCTGGAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: RSFCELSNSCLRITSPEKVLHYC*SFWRVS
Trigger: TGAGACTCTCCAGAAAGAGCAACAGTAATGGAGTAC...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS-3UTR GCA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACATCTGCGATGTTCTCGTaGCGGAAGCAAGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATSAMFS*RKQAWI
Trigger: AATCCAGGCTTGCTTCCGGCACGAGAACATCGCAGA...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTTGGACTGCAGTCATCTaGAATGTCTTCCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQIWTAVI*NVFQWR
Trigger: CCTCCACTGGAAGACATTGCAGATGACTGCAGTCCA...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATATACTCAGCAGCCTCTTaGGCTCCAAGAGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: STFKTSRFECLQHSMYSIYSAAS*APRGQS
Trigger: ACTCTGCCCTCTTGGAGCGCAAGAGGCTGCTGAGTA...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTCCTCGGTGCTTCCTGTaGACGAAGAATCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQIPRCFL*TKNQQC
Trigger: ACATTGCTGATTCTTCGTGCACAGGAAGCACCGAGG...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTCCAGGAGATCAATaGTGTCTTAATTTAGAGCAA +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSPPGDQ*CLNLEQ
Trigger: TTGCTCTAAATTAAGACAGCATTGATCTCCTGGAGG...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAAGGGTTCATAAACTGCTaGCTCTTCACTTGCATAAAG +
Preference number: 4 (lower is better)
Translates to: RSFCELSNSCLRITSPEKGFINC*LFTCIK
Trigger: CTTTATGCAAGTGAAGAGCCAGCAGTTTATGAACCC...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCTGGCCTGCTGTCAGATaGCTTCTAATTCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETWPAVR*LLIHQL
Trigger: TAACTGATGAATTAGAAGCCATCTGACAGCAGGCCA...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCGCTGCTTTGTATGCATaGGTGAGAAAAGTACTGAGT +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCAALYA*VRKVLS
Trigger: ACTCAGTACTTTTCTCACTCATGCATACAAAGCAGC...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR GCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCGCTTCCTTTCTTATCTaGAAACAAGATGTGGCTACC +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCASFLI*KQDVAT
Trigger: GGTAGCCACATCTTGTTTGCAGATAAGAAAGGAAGC...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR GCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCGTACTCCATTACTGTTaGTCTTTCTGGAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCVLHYC*SFWRVS
Trigger: TGAGACTCTCCAGAAAGAGCAACAGTAATGGAGTAC...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR GCA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATATTGTCACTTCCAGTaGTCATGTACTCCATTACTG +
Preference number: 4 (lower is better)
Translates to: RSFCELSNSCLRITSPEKYCHFQ*SCTPLL
Trigger: CAGTAATGGAGTACATGAGCACTGGAAGTGACAATA...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCACTGGGTTCATAAACTaGTGGCTCTTCACTTGCATA +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCTGFIN*WLFTCI
Trigger: TATGCAAGTGAAGAGCCAGCAGTTTATGAACCCAGT...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR GCA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACACCTCGGTGCTTCCTGTaGACGAAGAATCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATPRCFL*TKNQQC
Trigger: ACATTGCTGATTCTTCGTGCACAGGAAGCACCGAGG...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCGGGTTCATAAACTGCTaGCTCTTCACTTGCATAAAG +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCGFINC*LFTCIK
Trigger: CTTTATGCAAGTGAAGAGCCAGCAGTTTATGAACCC...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCACATGGTCATTAGACTaGGTTCATAAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCTWSLD*VHKLLA
Trigger: AGCCAGCAGTTTATGAACCCAGTCTAATGACCATGT...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCTACTGTCTTGACACATaGTCATTAGACTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETYCLDT*SLDWVH
Trigger: ATGAACCCAGTCTAATGACCATGTGTCAAGACAGTA...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTGCTTCCATAAAGAGATaGACAGTTTCACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQIASIKR*TVSPHR
Trigger: CCTGTGGGGTGAAACTGTCCATCTCTTTATGGAAGC...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp AGATGGCTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTCAGCTCTCTCATCCCTaGACTGCAGTCATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RWLLIHQLAIFRTLVQLIQLSHP*TAVICN
Trigger: ATTGCAGATGACTGCAGTCCAGGGATGAGAGAGCTG...AATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAGCCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACAGACACGATCCTTCTGTaGACTCTCAAATTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATDTILL*TLKFLP
Trigger: AGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTC...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCTATTGTCACTTCCAGTaGTCATGTACTCCATTACTG +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCYCHFQ*SCTPLL
Trigger: CAGTAATGGAGTACATGAGCACTGGAAGTGACAATA...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR GCA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACGTCTTTATATCTTGTaGCAAGTATACCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QQTRSFCELSNSCLRITSRLYIL*QVYLSK
Trigger: TTTGGAAAGGTATACTTGGCACAAGATATAAAGACG...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACACTCTCATCCCTGGACTaGAGTCATCTGCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATLSSLD*SHLQCL
Trigger: AAGACATTGCAGATGACTGCAGTCCAGGGATGAGAG...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp AGATGGCTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTCTGTCACTAGTGGCCTaGTGTCAGATGGCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: RWLLIHQLAIFRTLVQLILSLVA*CQMASN
Trigger: ATTAGAAGCCATCTGACAGCAGGCCACTAGTGACAG...AATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAGCCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCTACTGTCTTGACACATaGTCATTAGACTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCYCLDT*SLDWVH
Trigger: ATGAACCCAGTCTAATGACCATGTGTCAAGACAGTA...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCAATTTAGAGCAAACATaGCATCCTTCAGCCATATTC +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETNLEQT*HPSAIF
Trigger: GAATATGGCTGAAGGATGCCATGTTTGCTCTAAATT...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp AGATGGCTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTCTGCTCCTTCGAAAATaGCACCATTCACTGTACAGG +
Preference number: 4 (lower is better)
Translates to: RWLLIHQLAIFRTLVQLILLLRK*HHSLYR
Trigger: CCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAG...AATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAGCCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATAAGACCCATGGGAAACTaGCATACAAGGATTGGCAAC +
Preference number: 4 (lower is better)
Translates to: STFKTSRFECLQHSMYSIRPMGN*HTRIGN
Trigger: GTTGCCAATCCTTGTATGTCAGTTTCCCATGGGTCT...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375321.1
CDS-3UTR GCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCTGTGTCATTTTTAGCTaGTTTGTATGCATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCCVIFS*FVCMSE
Trigger: CTCACTCATGCATACAAAGCAGCTAAAAATGACACA...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR GCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCCGTCTTTATATCTTGTaGCAAGTATACCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETRLYIL*QVYLSK
Trigger: TTTGGAAAGGTATACTTGGCACAAGATATAAAGACG...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCACTAGTCCAGCTTATTaGTACAATCTTCAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETTSPAY*YNLQVV
Trigger: AACAACTTGAAGATTGTAGCAATAAGCTGGACTAGT...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTGGGTTCATAAACTGCTaGCTCTTCACTTGCATAAAG +
Preference number: 4 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQIGFINC*LFTCIK
Trigger: CTTTATGCAAGTGAAGAGCCAGCAGTTTATGAACCC...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCGCAGTGTTGGATATATaGTTTGCAAAAGCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCAVLDI*FAKASK
Trigger: TTTGCTTGCTTTTGCAAACCATATATCCAACACTGC...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CCA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATAGCTTCCATAAAGAGATaGACAGTTTCACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: STFKTSRFECLQHSMYSIASIKR*TVSPHR
Trigger: CCTGTGGGGTGAAACTGTCCATCTCTTTATGGAAGC...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCTTTGACCAACCACATTaGACAAAAGTATTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SQIPALESRHLRNENLETFDQPH*TKVLGF
Trigger: AAAACCCAATACTTTTGTCCAATGTGGTTGGTCAAA...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp AGATGGCTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTACATCTTCGGTCATTTaGACACTTAGGCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: RWLLIHQLAIFRTLVQLITSSVI*TLRPKS
Trigger: GGATTTTGGCCTAAGTGTTCAAATGACCGAAGATGT...AATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAGCCATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTAACCTTGAGACCTGGTaGATATCAAATAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQINLETW*ISNSFT
Trigger: TGTGAAGCTATTTGATATGCACCAGGTCTCAAGGTT...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACAACATGGTCATTAGACTaGGTTCATAAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATTWSLD*VHKLLA
Trigger: AGCCAGCAGTTTATGAACCCAGTCTAATGACCATGT...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACAGAGAACCTTGAGACCTaGTGCATATCAAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATENLET*CISNSF
Trigger: GAAGCTATTTGATATGCACCAGGTCTCAAGGTTCTC...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR TCA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATAACATCTTCGGTCATTTaGACACTTAGGCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: STFKTSRFECLQHSMYSITSSVI*TLRPKS
Trigger: GGATTTTGGCCTAAGTGTTCAAATGACCGAAGATGT...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp AGATGGCTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTTATTGTCACTTCCAGTaGTCATGTACTCCATTACTG +
Preference number: 4 (lower is better)
Translates to: RWLLIHQLAIFRTLVQLIYCHFQ*SCTPLL
Trigger: CAGTAATGGAGTACATGAGCACTGGAAGTGACAATA...AATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAGCCATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR GCA 90 bp AGATGGCTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTAACCTTGAGACCTGGTaGATATCAAATAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: RWLLIHQLAIFRTLVQLINLETW*ISNSFT
Trigger: TGTGAAGCTATTTGATATGCACCAGGTCTCAAGGTT...AATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAGCCATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATATGGCCTGCTGTCAGATaGCTTCTAATTCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: STFKTSRFECLQHSMYSIWPAVR*LLIHQL
Trigger: TAACTGATGAATTAGAAGCCATCTGACAGCAGGCCA...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACAGCAGTGTTGGATATATaGTTTGCAAAAGCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATAVLDI*FAKASK
Trigger: TTTGCTTGCTTTTGCAAACCATATATCCAACACTGC...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CCA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACACTTAAATTGATCTACTaGGATCAGTTTACACGCCAT +
Preference number: 4 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATLKLIY*DQFTRH
Trigger: ATGGCGTGTAAACTGATCCCAGTAGATCAATTTAAG...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS TCA 90 bp CCCGCACGCTCAGACCGCCCTGCTCTGCCCCTGACTCACGGCGTCTaGGCCTGCCCAGGGGCGGCGCAGCGGACGCCAGCCACCGCCTCC +
Preference number: 5 (lower is better)
Translates to: PARSDRPALPLTHGV*ACPGAAQRTPATAS
Trigger: GGAGGCGGTGGCTGGCGTCCGCTGCGCCGCCCCTGGGCAGGCTCAGACGCCGTGAGTCAGGGGCAGAGCAGGGCGGTCTGAGCGTGCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS TCA 90 bp CCGGACCCCAGAGCGTGGCGCGCAGTCCAGAGCGGAGCGGACGAGTaGGACCCGCGTCGCCCGCACGCTCAGACCGCCCTGCTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PDPRAWRAVQSGADE*DPRRPHAQTALLCP
Trigger: GGGGCAGAGCAGGGCGGTCTGAGCGTGCGGGCGACGCGGGTCTCACTCGTCCGCTCCGCTCTGGACTGCGCGCCACGCTCTGGGGTCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS CCA 90 bp GCGATGCTGGCTGCAGGCCTGTGGGAGCCGAGCACGCCGGGCCACTaGGATCCGGCGGCGGCAGCGGCAGAAGCAGGAACCAGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: AMLAAGLWEPSTPGH*DPAAAAAEAGTRAP
Trigger: CGGCGCCCTGGTTCCTGCTTCTGCCGCTGCCGCCGCCGGATCCCAGTGGCCCGGCGTGCTCGGCTCCCACAGGCCTGCAGCCAGCATCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000415139.5
ENST00000542547.5
CDS GCA 90 bp GAGCGGACGAGTGAGACCCGCGTCGCCCGCACGCTCAGACCGCCCTaGTCTGCCCCTGACTCACGGCGTCTGAGCCTGCCCAGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: ERTSETRVARTLRPP*SAPDSRRLSLPRGG
Trigger: GCCGCCCCTGGGCAGGCTCAGACGCCGTGAGTCAGGGGCAGAGCAGGGCGGTCTGAGCGTGCGGGCGACGCGGGTCTCACTCGTCCGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS-3UTR CAA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTATTGCATCTGCGGCCTaGGCGCTCCCACGCCGGCCG +
Preference number: 5 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLIASAA*ALPRRP
Trigger: CGGCCGGCGTGGGAGCGCCAAGGCCGCAGATGCAAT...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS TCA 90 bp GAGGGTAGCGCTTCACCCAGGGTGGGGTGCCCGTCTGCATGTGGATaGGCGTGGCCCCCAGGCTGTAGATGTCTGCTTTGGTTGAATGGC +
Preference number: 5 (lower is better)
Translates to: EGSASPRVGCPSACG*AWPPGCRCLLWLNG
Trigger: GCCATTCAACCAAAGCAGACATCTACAGCCTGGGGGCCACGCTCATCCACATGCAGACGGGCACCCCACCCTGGGTGAAGCGCTACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCGTAGGTCTGCGGCTCTaGGGCGGTGATTGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLVGLRL*GGDWGF
Trigger: GAAACCCCAATCACCGCCCAAGAGCCGCAGACCTAC...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS TCA 90 bp TGGAGGTGCTTGCTTGTGGATTATGTACAGGTAGGAGGGATAGGCTaGGCGAGGGTAGCGCTTCACCCAGGGTGGGGTGCCCGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: WRCLLVDYVQVGGIG*ARVALHPGWGARLH
Trigger: ATGCAGACGGGCACCCCACCCTGGGTGAAGCGCTACCCTCGCTCAGCCTATCCCTCCTACCTGTACATAATCCACAAGCAAGCACCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CCA 90 bp CCAAGAGGGCAGAGTCCAGACTCTGACAGCGTGGCTGATCCTCTCTaGGCGGGTTCAGGGCCTCATGTTTTAGTAGGTCTGCGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: PRGQSPDSDSVADPL*AGSGPHVLVGLRLL
Trigger: CAAGAGCCGCAGACCTACTAAAACATGAGGCCCTGAACCCGCCCAGAGAGGATCAGCCACGCTGTCAGAGTCTGGACTCTGCCCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCAGAGAGCGTTGCCTCTaGAGCATCTCAGATTCCTCG +
Preference number: 5 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLRERCL*SISDSS
Trigger: CGAGGAATCTGAGATGCTCAAGAGGCAACGCTCTCT...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCGGAGAGTCTGCGGCCTaGGCGCTCCCACGCCGGCCG +
Preference number: 5 (lower is better)
Translates to: SQIPALESRHLRNENLETGESAA*ALPRRP
Trigger: CGGCCGGCGTGGGAGCGCCAAGGCCGCAGACTCTCC...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS TCA 90 bp AGCCAGCCAGAGCGCCGAGGTCGATGTAGAGAGAGCGTTGCCTCTTaGGCATCTCAGATTCCTCGGTGCTTCCTGTGCACGAAGAATCAG +
Preference number: 5 (lower is better)
Translates to: SQPERRGRCRESVAS*ASQIPRCFLCTKNQ
Trigger: CTGATTCTTCGTGCACAGGAAGCACCGAGGAATCTGAGATGCTCAAGAGGCAACGCTCTCTCTACATCGACCTCGGCGCTCTGGCTGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS GCA 90 bp CTCGCCTGCTTCCATAAAGAGATGGACAGTTTCACCCCACAGGACTaGGCCATACAGCTCTGCGATGTTCTCGTGCCGGAAGCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: LACFHKEMDSFTPQD*AIQLCDVLVPEASL
Trigger: CAGGCTTGCTTCCGGCACGAGAACATCGCAGAGCTGTATGGCGCAGTCCTGTGGGGTGAAACTGTCCATCTCTTTATGGAAGCAGGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000413724.5
ENST00000415139.5
ENST00000430603.1
ENST00000542547.5
CDS GCA 90 bp TGGTCCACAGCTCTCCAGTTTCTCCAGAACAGACCCTCCCTCGCCTaGTTCCATAAAGAGATGGACAGTTTCACCCCACAGGACTGCGCC +
Preference number: 5 (lower is better)
Translates to: WSTALQFLQNRPSLA*FHKEMDSFTPQDCA
Trigger: GGCGCAGTCCTGTGGGGTGAAACTGTCCATCTCTTTATGGAAGCAGGCGAGGGAGGGTCTGTTCTGGAGAAACTGGAGAGCTGTGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000415139.5
ENST00000430603.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTAGCCATATTCAAGCGTaGGTGGTCCCCGAACAAGAT +
Preference number: 5 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLSHIQA*VVPEQD
Trigger: ATCTTGTTCGGGGACCACCAACGCTTGAATATGGCT...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCAGCCATATTCAAGCGTaGGTGGTCCCCGAACAAGAT +
Preference number: 5 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLSHIQA*VVPEQD
Trigger: ATCTTGTTCGGGGACCACCAACGCTTGAATATGGCT...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS TCA 90 bp CATGTGGATGAGCGTGGCCCCCAGGCTGTAGATGTCTGCTTTGGTTaGATGGCCCCTGCACAGGATGACCTCTGGGCTCATGTAAATCTC +
Preference number: 5 (lower is better)
Translates to: HVDERGPQAVDVCFG*MAPAQDDLWAHVNL
Trigger: GAGATTTACATGAGCCCAGAGGTCATCCTGTGCAGGGGCCATTCAACCAAAGCAGACATCTACAGCCTGGGGGCCACGCTCATCCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS GCA 90 bp CAATGTTCTCAGGAAGTTCCAGCTCCTTCCTACTCAGCAGCCTCTTaGGCTCCAAGAGGGCAGAGTCCAGACTCTGACAGCGTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: QCSQEVPAPSYSAAS*APRGQSPDSDSVAD
Trigger: ATCAGCCACGCTGTCAGAGTCTGGACTCTGCCCTCTTGGAGCGCAAGAGGCTGCTGAGTAGGAAGGAGCTGGAACTTCCTGAGAACATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCATTCGCGGTAAGAAGATaGCATCTGCGGCCTTGGCGC +
Preference number: 5 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMAFAVRR*HLRPWR
Trigger: GCGCCAAGGCCGCAGATGCAATCTTCTTACCGCGAA...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS-3UTR CAA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTCTACTCAGCAGCCTCTaGCGCTCCAAGAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PLCRGSRTSLQEINAVLILLSSL*RSKRAE
Trigger: CTCTGCCCTCTTGGAGCGCAAGAGGCTGCTGAGTAG...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTAACACACAGGGCCGCTaGGAGGCACATTCACGGGTC +
Preference number: 5 (lower is better)
Translates to: PLCRGSRTSLQEINAVLINTQGR*EAHSRV
Trigger: GACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS TCA 90 bp GCATCCTTCAGCCATATTCAAGCGTTGGTGGTCCCCGAACAAGATTaGAGTAGCCAGCCAGAGCGCCGAGGTCGATGTAGAGAGAGCGTT +
Preference number: 5 (lower is better)
Translates to: ASFSHIQALVVPEQD*SSQPERRGRCRESV
Trigger: AACGCTCTCTCTACATCGACCTCGGCGCTCTGGCTGGCTACTTCAATCTTGTTCGGGGACCACCAACGCTTGAATATGGCTGAAGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CCA 90 bp AGTTTCTCCAGAACAGACCCTCCCTCGCCTGCTTCCATAAAGAGATaGACAGTTTCACCCCACAGGACTGCGCCATACAGCTCTGCGATG +
Preference number: 5 (lower is better)
Translates to: SFSRTDPPSPASIKR*TVSPHRTAPYSSAM
Trigger: CATCGCAGAGCTGTATGGCGCAGTCCTGTGGGGTGAAACTGTCCATCTCTTTATGGAAGCAGGCGAGGGAGGGTCTGTTCTGGAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000413724.5
ENST00000415139.5
ENST00000430603.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCATTGCATCTGCGGCCTaGGCGCTCCCACGCCGGCCG +
Preference number: 5 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCIASAA*ALPRRP
Trigger: CGGCCGGCGTGGGAGCGCCAAGGCCGCAGATGCAAT...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CAA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTTGTACTCCATTACTGTaGCTCTTTCTGGAGAGTCTC +
Preference number: 5 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLCTPLL*LFLESL
Trigger: GAGACTCTCCAGAAAGAGCAACAGTAATGGAGTACA...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263056.6
CDS GCA 90 bp AAAGAGATGGACAGTTTCACCCCACAGGACTGCGCCATACAGCTCTaGGATGTTCTCGTGCCGGAAGCAAGCCTGGATTTCCACATCAGA +
Preference number: 5 (lower is better)
Translates to: KEMDSFTPQDCAIQL*DVLVPEASLDFHIR
Trigger: TCTGATGTGGAAATCCAGGCTTGCTTCCGGCACGAGAACATCGCAGAGCTGTATGGCGCAGTCCTGTGGGGTGAAACTGTCCATCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000413724.5
ENST00000415139.5
ENST00000430603.1
ENST00000542547.5
CDS-3UTR CAA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCAGAAAATCAAGTCCCTaGAGAACATGCTTTGTCACC +
Preference number: 5 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLRKSSP*RTCFVT
Trigger: GGTGACAAAGCATGTTCTCAAGGGACTTGATTTTCT...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp AGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATAGATGTCTGCTTTGGTaGAATGGCCCCTGCACAGGA +
Preference number: 5 (lower is better)
Translates to: RHIHGSQEVTLLLRKWHHRCLLW*NGPCTG
Trigger: TCCTGTGCAGGGGCCATTCAACCAAAGCAGACATCT...ATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCAAGATGTCTGCTTTGGTaGAATGGCCCCTGCACAGGA +
Preference number: 5 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMARCLLW*NGPCTG
Trigger: TCCTGTGCAGGGGCCATTCAACCAAAGCAGACATCT...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCAAGAGAGCGTTGCCTCTaGAGCATCTCAGATTCCTCG +
Preference number: 5 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMARERCL*SISDSS
Trigger: CGAGGAATCTGAGATGCTCAAGAGGCAACGCTCTCT...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCAGCCATATTCAAGCGTaGGTGGTCCCCGAACAAGAT +
Preference number: 5 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPSHIQA*VVPEQD
Trigger: ATCTTGTTCGGGGACCACCAACGCTTGAATATGGCT...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCTGTACTCCATTACTGTaGCTCTTTCTGGAGAGTCTA +
Preference number: 5 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLCTPLL*LFLESL
Trigger: TAGACTCTCCAGAAAGAGCAACAGTAATGGAGTACA...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375321.1
CDS CCA 90 bp CAGCTCTCTCATCCCTGGACTGCAGTCATCTGCAATGTCTTCCAGTaGAGGTGCTTGCTTGTGGATTATGTACAGGTAGGAGGGATAGGC +
Preference number: 5 (lower is better)
Translates to: QLSHPWTAVICNVFQ*RCLLVDYVQVGGIG
Trigger: GCCTATCCCTCCTACCTGTACATAATCCACAAGCAAGCACCTCCACTGGAAGACATTGCAGATGACTGCAGTCCAGGGATGAGAGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGATCAATCTCTTCTTTATaGTCACTTCCAGTGCTCATG +
Preference number: 5 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRSISSL*SLPVLM
Trigger: CATGAGCACTGGAAGTGACAATAAAGAAGAGATTGA...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTTCAATCTCTTCTTTATaGTCACTTCCAGTGCTCATG +
Preference number: 5 (lower is better)
Translates to: HRAAWRHIHGSQEVTLLLSISSL*SLPVLM
Trigger: CATGAGCACTGGAAGTGACAATAAAGAAGAGATTGA...AAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp ACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCAGAACGCTCATCGTTTaGATTACTGTCTTGACACAT +
Preference number: 5 (lower is better)
Translates to: THRAAWRHIHGSQEVTLLRTLIV*ITVLTH
Trigger: ATGTGTCAAGACAGTAATCAAAACGATGAGCGTTCT...GAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTAGATGTCTGCTTTGGTaGAATGGCCCCTGCACAGGA +
Preference number: 5 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIRCLLW*NGPCTG
Trigger: TCCTGTGCAGGGGCCATTCAACCAAAGCAGACATCT...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCTTCCAGTGGAGGTGCTaGCTTGTGGATTATGTACAG +
Preference number: 5 (lower is better)
Translates to: HRRSHCSFENGTIHCTGPFQWRC*LVDYVQ
Trigger: CTGTACATAATCCACAAGCAAGCACCTCCACTGGAA...GGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCAGATGTAGAGAGAGCGTaGCCTCTTGAGCATCTCAGA +
Preference number: 5 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMADVERA*PLEHLR
Trigger: TCTGAGATGCTCAAGAGGCAACGCTCTCTCTACATC...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CCA 90 bp AGCTTCCTTTCTTATCTGCAAACAAGATGTGGCTACCTATTCCCCTaGCTTCTTCGCGGTAAGAAGATTGCATCTGCGGCCTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: SFLSYLQTRCGYLFP*LLRGKKIASAALAL
Trigger: GAGCGCCAAGGCCGCAGATGCAATCTTCTTACCGCGAAGAAGCCAGGGGAATAGGTAGCCACATCTTGTTTGCAGATAAGAAAGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000375322.2
CDS CCA 90 bp AATTTAGAGCAAACATGGCATCCTTCAGCCATATTCAAGCGTTGGTaGTCCCCGAACAAGATTGAAGTAGCCAGCCAGAGCGCCGAGGTC +
Preference number: 5 (lower is better)
Translates to: NLEQTWHPSAIFKRW*SPNKIEVASQSAEV
Trigger: GACCTCGGCGCTCTGGCTGGCTACTTCAATCTTGTTCGGGGACCACCAACGCTTGAATATGGCTGAAGGATGCCATGTTTGCTCTAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp AGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGATGTTGGATATATGGTTaGCAAAAGCAAGCAAATCCT +
Preference number: 5 (lower is better)
Translates to: RAAWRHIHGSQEVTLLLRCWIYG*QKQANP
Trigger: AGGATTTGCTTGCTTTTGCAAACCATATATCCAACA...TCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCATTCCAGTGGAGGTGCTaGCTTGTGGATTATGTACAG +
Preference number: 5 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMAFQWRC*LVDYVQ
Trigger: CTGTACATAATCCACAAGCAAGCACCTCCACTGGAA...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAAGTAGGTCTGCGGCTCTaGGGCGGTGATTGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: RSFCELSNSCLRITSPEKVGLRL*GGDWGF
Trigger: GAAACCCCAATCACCGCCCAAGAGCCGCAGACCTAC...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCCTACTCAGCAGCCTCTaGCGCTCCAAGAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SQIPALESRHLRNENLETLLSSL*RSKRAE
Trigger: CTCTGCCCTCTTGGAGCGCAAGAGGCTGCTGAGTAG...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CCA 90 bp CTTAATTTAGAGCAAACATGGCATCCTTCAGCCATATTCAAGCGTTaGTGGTCCCCGAACAAGATTGAAGTAGCCAGCCAGAGCGCCGAG +
Preference number: 5 (lower is better)
Translates to: LNLEQTWHPSAIFKR*WSPNKIEVASQSAE
Trigger: CTCGGCGCTCTGGCTGGCTACTTCAATCTTGTTCGGGGACCACCAACGCTTGAATATGGCTGAAGGATGCCATGTTTGCTCTAAATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp AACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTATCAGATGGCTTAAATaGATCTACTGGGATCAGTTT +
Preference number: 5 (lower is better)
Translates to: NTQGRLEAHSRVTGGHTAIRWLK*IYWDQF
Trigger: AAACTGATCCCAGTAGATCAATTTAAGCCATCTGAT...AGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp AACACACAGGGCCGCTTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTTCAAAACATCACGTTTaGAATGTCTTCAGCATAGCA +
Preference number: 5 (lower is better)
Translates to: NTQGRLEAHSRVTGGHTASKHHV*NVFSIA
Trigger: TGCTATGCTGAAGACATTCAAAACGTGATGTTTTGA...AGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCTTCGCGGTAAGAAGATaGCATCTGCGGCCTTGGCGC +
Preference number: 5 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCFAVRR*HLRPWR
Trigger: GCGCCAAGGCCGCAGATGCAATCTTCTTACCGCGAA...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CAA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTTTGGTAACGTCCATTTaGGGGAGTGATGACCATGTT +
Preference number: 5 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCLVTSI*GSDDHV
Trigger: AACATGGTCATCACTCCCCAAAATGGACGTTACCAA...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCAAACATCGGAATCTATTaGGTAACGTCCATTTTGGGG +
Preference number: 5 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMANIGIY*VTSILG
Trigger: CCCCAAAATGGACGTTACCAAATAGATTCCGATGTT...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp ACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGTGTAGAGGCAAACATCGGAATCTATTaGGTAACGTCCATTTTGGGG +
Preference number: 5 (lower is better)
Translates to: TAPSKMAPFTVQGPCVEANIGIY*VTSILG
Trigger: CCCCAAAATGGACGTTACCAAATAGATTCCGATGTT...TGCCTCTACACAGGGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CCA 90 bp AACCAGCCTCCAGGAGATCAATGCTGTCTTAATTTAGAGCAAACATaGCATCCTTCAGCCATATTCAAGCGTTGGTGGTCCCCGAACAAG +
Preference number: 5 (lower is better)
Translates to: NQPPGDQCCLNLEQT*HPSAIFKRWWSPNK
Trigger: CTTGTTCGGGGACCACCAACGCTTGAATATGGCTGAAGGATGCCATGTTTGCTCTAAATTAAGACAGCATTGATCTCCTGGAGGCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp ACTGCTCCTTCGAAAATGGCACCATTCACTGTACAGGGCCCCTGTGTAGAGGCAAGAACGCTCATCGTTTaGATTACTGTCTTGACACAT +
Preference number: 5 (lower is better)
Translates to: TAPSKMAPFTVQGPCVEARTLIV*ITVLTH
Trigger: ATGTGTCAAGACAGTAATCAAAACGATGAGCGTTCT...TGCCTCTACACAGGGGCCCTGTACAGTGAATGGTGCCATTTTCGAAGGAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCCAACCATGGTACCTCTaGGCCACTAAGCAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: SQIPALESRHLRNENLETQPWYL*ATKQQR
Trigger: TCTCTGCTGCTTAGTGGCCAAGAGGTACCATGGTTG...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTAACATCGGAATCTATTaGGTAACGTCCATTTTGGGG +
Preference number: 5 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCNIGIY*VTSILG
Trigger: CCCCAAAATGGACGTTACCAAATAGATTCCGATGTT...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTTTTCAAATTCTCTCATaGGTCCACAGCTCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCFQILS*VHSSPV
Trigger: AACTGGAGAGCTGTGGACCAATGAGAGAATTTGAAA...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCAGAGAGCGTTGCCTCTaGAGCATCTCAGATTCCTCG +
Preference number: 5 (lower is better)
Translates to: SQIPALESRHLRNENLETRERCL*SISDSS
Trigger: CGAGGAATCTGAGATGCTCAAGAGGCAACGCTCTCT...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTAACACACAGGGCCGCTaGGAGGCACATTCACGGGTC +
Preference number: 5 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQINTQGR*EAHSRV
Trigger: GACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTTCAATCTCTTCTTTATaGTCACTTCCAGTGCTCATG +
Preference number: 5 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCSISSL*SLPVLM
Trigger: CATGAGCACTGGAAGTGACAATAAAGAAGAGATTGA...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTAGAACGCTCATCGTTTaGATTACTGTCTTGACACAT +
Preference number: 5 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCRTLIV*ITVLTH
Trigger: ATGTGTCAAGACAGTAATCAAAACGATGAGCGTTCT...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCCAACCATGGTACCTCTaGGCCACTAAGCAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCQPWYL*ATKQQR
Trigger: TCTCTGCTGCTTAGTGGCCAAGAGGTACCATGGTTG...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CAA 90 bp TTGGAGGCACATTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCAGATGGATCACTTTCTTaGAGTGTAGAAAATCAAGTC +
Preference number: 5 (lower is better)
Translates to: LEAHSRVTGGHTAPSKMADGSLS*SVENQV
Trigger: GACTTGATTTTCTACACTCAAAGAAAGTGATCCATC...TGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAATGTGCCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCGATGTAGAGAGAGCGTaGCCTCTTGAGCATCTCAGA +
Preference number: 5 (lower is better)
Translates to: SQIPALESRHLRNENLETDVERA*PLEHLR
Trigger: TCTGAGATGCTCAAGAGGCAACGCTCTCTCTACATC...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACAAACACACAGGGCCGCTaGGAGGCACATTCACGGGTC +
Preference number: 5 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATNTQGR*EAHSRV
Trigger: GACCCGTGAATGTGCCTCCAAGCGGCCCTGTGTGTT...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CCA 90 bp TGCGATGTTCTCGTGCCGGAAGCAAGCCTGGATTTCCACATCAGATaGCTTAAATTGATCTACTGGGATCAGTTTACACGCCATTCTTTT +
Preference number: 5 (lower is better)
Translates to: CDVLVPEASLDFHIR*LKLIYWDQFTRHSF
Trigger: AAAAGAATGGCGTGTAAACTGATCCCAGTAGATCAATTTAAGCCATCTGATGTGGAAATCCAGGCTTGCTTCCGGCACGAGAACATCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000413724.5
ENST00000415139.5
ENST00000430603.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTGTCCATAAAAATGCTTaGCAGTGTTGGATATATGGT +
Preference number: 5 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIVHKNA*QCWIYG
Trigger: ACCATATATCCAACACTGCAAAGCATTTTTATGGAC...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CAGCAGACACGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCATTGGTAACGTCCATTTaGGGGAGTGATGACCATGTT +
Preference number: 5 (lower is better)
Translates to: QQTRSFCELSNSCLRITSLVTSI*GSDDHV
Trigger: AACATGGTCATCACTCCCCAAAATGGACGTTACCAA...TGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCGTGTCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTATCAGATGGCTTAAATaGATCTACTGGGATCAGTTT +
Preference number: 5 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCIRWLK*IYWDQF
Trigger: AAACTGATCCCAGTAGATCAATTTAAGCCATCTGAT...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CCCCTGTGTAGAGGCAGCAGAACCAGCCTCCAGGAGATCAATGCTGTCTTAATTGATGGATCACTTTCTTaGAGTGTAGAAAATCAAGTC +
Preference number: 5 (lower is better)
Translates to: PLCRGSRTSLQEINAVLIDGSLS*SVENQV
Trigger: GACTTGATTTTCTACACTCAAAGAAAGTGATCCATC...AATTAAGACAGCATTGATCTCCTGGAGGCTGGTTCTGCTGCCTCTACACAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATTCCAGTGGAGGTGCTaGCTTGTGGATTATGTACAG +
Preference number: 5 (lower is better)
Translates to: RSFCELSNSCLRITSPEKFQWRC*LVDYVQ
Trigger: CTGTACATAATCCACAAGCAAGCACCTCCACTGGAA...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATAGTAGGTCTGCGGCTCTaGGGCGGTGATTGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: STFKTSRFECLQHSMYSIVGLRL*GGDWGF
Trigger: GAAACCCCAATCACCGCCCAAGAGCCGCAGACCTAC...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTCACGGGTCACAGGAGGTCACACTGCTCCTTCGAAAATGGCACCATTCACTGTTCAAAACATCACGTTTaGAATGTCTTCAGCATAGCA +
Preference number: 5 (lower is better)
Translates to: FTGHRRSHCSFENGTIHCSKHHV*NVFSIA
Trigger: TGCTATGCTGAAGACATTCAAAACGTGATGTTTTGA...ACAGTGAATGGTGCCATTTTCGAAGGAGCAGTGTGACCTCCTGTGACCCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTCAACCATGGTACCTCTaGGCCACTAAGCAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQIQPWYL*ATKQQR
Trigger: TCTCTGCTGCTTAGTGGCCAAGAGGTACCATGGTTG...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATTGGTAACGTCCATTTaGGGGAGTGATGACCATGTT +
Preference number: 5 (lower is better)
Translates to: RSFCELSNSCLRITSPEKLVTSI*GSDDHV
Trigger: AACATGGTCATCACTCCCCAAAATGGACGTTACCAA...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS GCA 90 bp ATGAGTGAGAAAAGTACTGAGTCAGACTCCTGGCTTTGCAGATACTaGGTTAGCTTCCTTTCTTATCTGCAAACAAGATGTGGCTACCTA +
Preference number: 5 (lower is better)
Translates to: MSEKSTESDSWLCRY*VSFLSYLQTRCGYL
Trigger: TAGGTAGCCACATCTTGTTTGCAGATAAGAAAGGAAGCTAACGCAGTATCTGCAAAGCCAGGAGTCTGACTCAGTACTTTTCTCACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000375322.2
CDS CCA 90 bp AGCTGCTTTGTATGCATGAGTGAGAAAAGTACTGAGTCAGACTCCTaGCTTTGCAGATACTGCGTTAGCTTCCTTTCTTATCTGCAAACA +
Preference number: 5 (lower is better)
Translates to: SCFVCMSEKSTESDS*LCRYCVSFLSYLQT
Trigger: TGTTTGCAGATAAGAAAGGAAGCTAACGCAGTATCTGCAAAGCCAGGAGTCTGACTCAGTACTTTTCTCACTCATGCATACAAAGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000375322.2
CDS-3UTR CAA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAAAGATTCCTGTGGTCGTaGTCCATAAAAATGCTTTGC +
Preference number: 5 (lower is better)
Translates to: RSFCELSNSCLRITSPEKRFLWS*SIKMLC
Trigger: GCAAAGCATTTTTATGGACAACGACCACAGGAATCT...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCAGATTCCTGTGGTCGTaGTCCATAAAAATGCTTTGC +
Preference number: 5 (lower is better)
Translates to: SQIPALESRHLRNENLETRFLWS*SIKMLC
Trigger: GCAAAGCATTTTTATGGACAACGACCACAGGAATCT...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATTTCAAATTCTCTCATaGGTCCACAGCTCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: RSFCELSNSCLRITSPEKFQILS*VHSSPV
Trigger: AACTGGAGAGCTGTGGACCAATGAGAGAATTTGAAA...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAAAGAAAATCAAGTCCCTaGAGAACATGCTTTGTCACC +
Preference number: 5 (lower is better)
Translates to: RSFCELSNSCLRITSPEKRKSSP*RTCFVT
Trigger: GGTGACAAAGCATGTTCTCAAGGGACTTGATTTTCT...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCAGATTCCTGTGGTCGTaGTCCATAAAAATGCTTTGC +
Preference number: 5 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCRFLWS*SIKMLC
Trigger: GCAAAGCATTTTTATGGACAACGACCACAGGAATCT...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS TCA 90 bp TCCATGGAGGGTCTTCAGATTACAGGAAGGAGCTTGTTTGTCTCCTaGATAACTAGTCTCTTTGAGCCAAAAAGGTATATGTCCAAAGAT +
Preference number: 5 (lower is better)
Translates to: SMEGLQITGRSLFVS*ITSLFEPKRYMSKD
Trigger: ATCTTTGGACATATACCTTTTTGGCTCAAAGAGACTAGTTATTCAGGAGACAAACAAGCTCCTTCCTGTAATCTGAAGACCCTCCATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430603.1
CDS-3UTR CAA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCTCAATCTCTTCTTTATaGTCACTTCCAGTGCTCATG +
Preference number: 5 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCSISSL*SLPVLM
Trigger: CATGAGCACTGGAAGTGACAATAAAGAAGAGATTGA...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CAA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCAGAACGCTCATCGTTTaGATTACTGTCTTGACACAT +
Preference number: 5 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCRTLIV*ITVLTH
Trigger: ATGTGTCAAGACAGTAATCAAAACGATGAGCGTTCT...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CAA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCTGTTGGATATATGGTTaGCAAAAGCAAGCAAATCCT +
Preference number: 5 (lower is better)
Translates to: SQIPALESRHLRNENLETCWIYG*QKQANP
Trigger: AGGATTTGCTTGCTTTTGCAAACCATATATCCAACA...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAAGTCCATAAAAATGCTTaGCAGTGTTGGATATATGGT +
Preference number: 5 (lower is better)
Translates to: RSFCELSNSCLRITSPEKVHKNA*QCWIYG
Trigger: ACCATATATCCAACACTGCAAAGCATTTTTATGGAC...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp CGATCCTTCTGTGAACTCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAAATCAGATGGCTTAAATaGATCTACTGGGATCAGTTT +
Preference number: 5 (lower is better)
Translates to: RSFCELSNSCLRITSPEKIRWLK*IYWDQF
Trigger: AAACTGATCCCAGTAGATCAATTTAAGCCATCTGAT...TTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGAGTTCACAGAAGGATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TCTCAAATTCCTGCCTTAGAATCACGTCACCTGAGAAATGAGAACCTTGAGACCGATGGATCACTTTCTTaGAGTGTAGAAAATCAAGTC +
Preference number: 5 (lower is better)
Translates to: SQIPALESRHLRNENLETDGSLS*SVENQV
Trigger: GACTTGATTTTCTACACTCAAAGAAAGTGATCCATC...GGTCTCAAGGTTCTCATTTCTCAGGTGACGTGATTCTAAGGCAGGAATTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATAGATGTAGAGAGAGCGTaGCCTCTTGAGCATCTCAGA +
Preference number: 5 (lower is better)
Translates to: STFKTSRFECLQHSMYSIDVERA*PLEHLR
Trigger: TCTGAGATGCTCAAGAGGCAACGCTCTCTCTACATC...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CCA 90 bp AACGCTCATCGTTTTGATTACTGTCTTGACACATGGTCATTAGACTaGGTTCATAAACTGCTGGCTCTTCACTTGCATAAAGATTTTCCA +
Preference number: 5 (lower is better)
Translates to: NAHRFDYCLDTWSLD*VHKLLALHLHKDFP
Trigger: TGGAAAATCTTTATGCAAGTGAAGAGCCAGCAGTTTATGAACCCAGTCTAATGACCATGTGTCAAGACAGTAATCAAAACGATGAGCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000375322.2
ENST00000413724.5
ENST00000415139.5
ENST00000542547.5
CDS-3UTR CAA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCTGTTGGATATATGGTTaGCAAAAGCAAGCAAATCCT +
Preference number: 5 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCCWIYG*QKQANP
Trigger: AGGATTTGCTTGCTTTTGCAAACCATATATCCAACA...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CAA 90 bp TTTTTAAAATCATGCCTGCCAGCCCATCTAAGCCAAATTCAAACACCACTCTGCGTCCATAAAAATGCTTaGCAGTGTTGGATATATGGT +
Preference number: 5 (lower is better)
Translates to: FLKSCLPAHLSQIQTPLCVHKNA*QCWIYG
Trigger: ACCATATATCCAACACTGCAAAGCATTTTTATGGAC...GCAGAGTGGTGTTTGAATTTGGCTTAGATGGGCTGGCAGGCATGATTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS-3UTR CAA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACATGTACTCCATTACTGTaGCTCTTTCTGGAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATCTPLL*LFLESL
Trigger: CAGACTCTCCAGAAAGAGCAACAGTAATGGAGTACA...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS-3UTR CAA 90 bp CTTCTAATTCATCAGTTAGCCATTTTTAGGACACTAGTCCAGCTTATTGCTACAAGAAAATCAAGTCCCTaGAGAACATGCTTTGTCACC +
Preference number: 5 (lower is better)
Translates to: LLIHQLAIFRTLVQLIATRKSSP*RTCFVT
Trigger: GGTGACAAAGCATGTTCTCAAGGGACTTGATTTTCT...TGTAGCAATAAGCTGGACTAGTGTCCTAAAAATGGCTAACTGATGAATTAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS GCA 90 bp TGGATCACTTTCTTTGAGTGTAGAAAATCAAGTCCCTTGAGAACATaGTTTGTCACCCAAATAATTTCAAATTCTCTCATTGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: WITFFECRKSSPLRT*FVTQIISNSLIGPQ
Trigger: CTGTGGACCAATGAGAGAATTTGAAATTATTTGGGTGACAAAGCATGTTCTCAAGGGACTTGATTTTCTACACTCAAAGAAAGTGATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000415139.5
ENST00000430603.1
ENST00000542547.5
CDS-3UTR CAA 90 bp GACACTAGTCCAGCTTATTGCTACAATCTTCAAGTTGTTCTAGTCACCCAAATTGTCCATAAAAATGCTTaGCAGTGTTGGATATATGGT +
Preference number: 5 (lower is better)
Translates to: DTSPAYCYNLQVVLVTQIVHKNA*QCWIYG
Trigger: ACCATATATCCAACACTGCAAAGCATTTTTATGGAC...AATTTGGGTGACTAGAACAACTTGAAGATTGTAGCAATAAGCTGGACTAGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATAAGATTCCTGTGGTCGTaGTCCATAAAAATGCTTTGC +
Preference number: 5 (lower is better)
Translates to: STFKTSRFECLQHSMYSIRFLWS*SIKMLC
Trigger: GCAAAGCATTTTTATGGACAACGACCACAGGAATCT...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATATGTTGGATATATGGTTaGCAAAAGCAAGCAAATCCT +
Preference number: 5 (lower is better)
Translates to: STFKTSRFECLQHSMYSICWIYG*QKQANP
Trigger: AGGATTTGCTTGCTTTTGCAAACCATATATCCAACA...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS-3UTR CAA 90 bp TCCACATTCAAAACATCACGTTTTGAATGTCTTCAGCATAGCATGTACAGTATATCAAAACATCACGTTTaGAATGTCTTCAGCATAGCA +
Preference number: 5 (lower is better)
Translates to: STFKTSRFECLQHSMYSISKHHV*NVFSIA
Trigger: TGCTATGCTGAAGACATTCAAAACGTGATGTTTTGA...TATACTGTACATGCTATGCTGAAGACATTCAAAACGTGATGTTTTGAATGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS TCA 72 bp CGTCGCCCGCACGCTCAGACCGCCCTGCTCTGCCCCTaGCTCACGGCGTCTGAGCCTGCCCAGGGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: RRPHAQTALLCP*LTASEPAQGRR
Trigger: GCGCCGCCCCTGGGCAGGCTCAGACGCCGTGAGTCAGGGGCAGAGCAGGGCGGTCTGAGCGTGCGGGCGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS TCA 72 bp TCAGACCGCCCTGCTCTGCCCCTGACTCACGGCGTCTaGGCCTGCCCAGGGGCGGCGCAGCGGACGCCAGCC +
Preference number: 6 (lower is better)
Translates to: SDRPALPLTHGV*ACPGAAQRTPA
Trigger: GGCTGGCGTCCGCTGCGCCGCCCCTGGGCAGGCTCAGACGCCGTGAGTCAGGGGCAGAGCAGGGCGGTCTGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS CCA 72 bp GCTGCAGGCCTGTGGGAGCCGAGCACGCCGGGCCACTaGGATCCGGCGGCGGCAGCGGCAGAAGCAGGAACC +
Preference number: 6 (lower is better)
Translates to: AAGLWEPSTPGH*DPAAAAAEAGT
Trigger: GGTTCCTGCTTCTGCCGCTGCCGCCGCCGGATCCCAGTGGCCCGGCGTGCTCGGCTCCCACAGGCCTGCAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000415139.5
ENST00000542547.5
CDS CCA 72 bp CCCCGAAGGTTCGGTGCGATGCTGGCTGCAGGCCTGTaGGAGCCGAGCACGCCGGGCCACTGGGATCCGGCG +
Preference number: 6 (lower is better)
Translates to: PRRFGAMLAAGL*EPSTPGHWDPA
Trigger: CGCCGGATCCCAGTGGCCCGGCGTGCTCGGCTCCCACAGGCCTGCAGCCAGCATCGCACCGAACCTTCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263056.6
ENST00000375322.2
ENST00000415139.5
ENST00000542547.5
CDS GCA 72 bp AGTGAGACCCGCGTCGCCCGCACGCTCAGACCGCCCTaGTCTGCCCCTGACTCACGGCGTCTGAGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: SETRVARTLRPP*SAPDSRRLSLP
Trigger: GGGCAGGCTCAGACGCCGTGAGTCAGGGGCAGAGCAGGGCGGTCTGAGCGTGCGGGCGACGCGGGTCTCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542547.5
CDS TCA 72 bp GCTTCACCCAGGGTGGGGTGCCCGTCTGCATGTGGATaGGCGTGGCCCCCAGGCTGTAGATGTCTGCTTTGG +
Preference number: 6 (lower is better)
Translates to: ASPRVGCPSACG*AWPPGCRCLLW
Trigger: CCAAAGCAGACATCTACAGCCTGGGGGCCACGCTCATCCACATGCAGACGGGCACCCCACCCTGGGTGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS TCA 72 bp GAGCGTGGCCCCCAGGCTGTAGATGTCTGCTTTGGTTaGATGGCCCCTGCACAGGATGACCTCTGGGCTCAT +
Preference number: 6 (lower is better)
Translates to: ERGPQAVDVCFG*MAPAQDDLWAH
Trigger: ATGAGCCCAGAGGTCATCCTGTGCAGGGGCCATTCAACCAAAGCAGACATCTACAGCCTGGGGGCCACGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CAA 72 bp GCCAGCCAGAGCGCCGAGGTCGATGTAGAGAGAGCGTaGCCTCTTGAGCATCTCAGATTCCTCGGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: ASQSAEVDVERA*PLEHLRFLGAS
Trigger: GGAAGCACCGAGGAATCTGAGATGCTCAAGAGGCAACGCTCTCTCTACATCGACCTCGGCGCTCTGGCTGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS TCA 72 bp TTGCTTGTGGATTATGTACAGGTAGGAGGGATAGGCTaGGCGAGGGTAGCGCTTCACCCAGGGTGGGGTGCC +
Preference number: 6 (lower is better)
Translates to: LLVDYVQVGGIG*ARVALHPGWGA
Trigger: GGCACCCCACCCTGGGTGAAGCGCTACCCTCGCTCAGCCTATCCCTCCTACCTGTACATAATCCACAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS TCA 72 bp GAGCGCCGAGGTCGATGTAGAGAGAGCGTTGCCTCTTaGGCATCTCAGATTCCTCGGTGCTTCCTGTGCACG +
Preference number: 6 (lower is better)
Translates to: ERRGRCRESVAS*ASQIPRCFLCT
Trigger: CGTGCACAGGAAGCACCGAGGAATCTGAGATGCTCAAGAGGCAACGCTCTCTCTACATCGACCTCGGCGCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CAA 90 bp CTCTGGGCGGGTTCAGGGCCTCATGTTTTAGTAGGTCTGCGGCTCTaGGGCGGTGATTGGGGTTTCTCTCCAGGGAAGCTTCTATCAGCT +
Preference number: 6 (lower is better)
Translates to: LWAGSGPHVLVGLRL*GGDWGFSPGKLLSA
Trigger: AGCTGATAGAAGCTTCCCTGGAGAGAAACCCCAATCACCGCCCAAGAGCCGCAGACCTACTAAAACATGAGGCCCTGAACCCGCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS GCA 72 bp CACAGGACTGCGCCATACAGCTCTGCGATGTTCTCGTaGCGGAAGCAAGCCTGGATTTCCACATCAGATGGC +
Preference number: 6 (lower is better)
Translates to: HRTAPYSSAMFS*RKQAWISTSDG
Trigger: GCCATCTGATGTGGAAATCCAGGCTTGCTTCCGGCACGAGAACATCGCAGAGCTGTATGGCGCAGTCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000413724.5
ENST00000415139.5
ENST00000430603.1
ENST00000542547.5
CDS GCA 72 bp GACAGTTTCACCCCACAGGACTGCGCCATACAGCTCTaGGATGTTCTCGTGCCGGAAGCAAGCCTGGATTTC +
Preference number: 6 (lower is better)
Translates to: DSFTPQDCAIQL*DVLVPEASLDF
Trigger: GAAATCCAGGCTTGCTTCCGGCACGAGAACATCGCAGAGCTGTATGGCGCAGTCCTGTGGGGTGAAACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000413724.5
ENST00000415139.5
ENST00000430603.1
ENST00000542547.5
CDS CCA 72 bp CAGAGTCCAGACTCTGACAGCGTGGCTGATCCTCTCTaGGCGGGTTCAGGGCCTCATGTTTTAGTAGGTCTG +
Preference number: 6 (lower is better)
Translates to: QSPDSDSVADPL*AGSGPHVLVGL
Trigger: CAGACCTACTAAAACATGAGGCCCTGAACCCGCCCAGAGAGGATCAGCCACGCTGTCAGAGTCTGGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CAA 90 bp ATTGAAGTAGCCAGCCAGAGCGCCGAGGTCGATGTAGAGAGAGCGTaGCCTCTTGAGCATCTCAGATTCCTCGGTGCTTCCTGTGCACGA +
Preference number: 6 (lower is better)
Translates to: IEVASQSAEVDVERA*PLEHLRFLGASCAR
Trigger: TCGTGCACAGGAAGCACCGAGGAATCTGAGATGCTCAAGAGGCAACGCTCTCTCTACATCGACCTCGGCGCTCTGGCTGGCTACTTCAAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CCA 72 bp AGAACAGACCCTCCCTCGCCTGCTTCCATAAAGAGATaGACAGTTTCACCCCACAGGACTGCGCCATACAGC +
Preference number: 6 (lower is better)
Translates to: RTDPPSPASIKR*TVSPHRTAPYS
Trigger: GCTGTATGGCGCAGTCCTGTGGGGTGAAACTGTCCATCTCTTTATGGAAGCAGGCGAGGGAGGGTCTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000413724.5
ENST00000415139.5
ENST00000430603.1
ENST00000542547.5
CDS TCA 72 bp GCCTCATGTTTTAGTAGGTCTGCGGCTCTTGGGCGGTaGTTGGGGTTTCTCTCCAGGGAAGCTTCTATCAGC +
Preference number: 6 (lower is better)
Translates to: ASCFSRSAALGR*LGFLSREASIS
Trigger: GCTGATAGAAGCTTCCCTGGAGAGAAACCCCAATCACCGCCCAAGAGCCGCAGACCTACTAAAACATGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS TCA 72 bp AGCCATATTCAAGCGTTGGTGGTCCCCGAACAAGATTaGAGTAGCCAGCCAGAGCGCCGAGGTCGATGTAGA +
Preference number: 6 (lower is better)
Translates to: SHIQALVVPEQD*SSQPERRGRCR
Trigger: TCTACATCGACCTCGGCGCTCTGGCTGGCTACTTCAATCTTGTTCGGGGACCACCAACGCTTGAATATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS GCA 72 bp TTCCATAAAGAGATGGACAGTTTCACCCCACAGGACTaGGCCATACAGCTCTGCGATGTTCTCGTGCCGGAA +
Preference number: 6 (lower is better)
Translates to: FHKEMDSFTPQD*AIQLCDVLVPE
Trigger: TTCCGGCACGAGAACATCGCAGAGCTGTATGGCGCAGTCCTGTGGGGTGAAACTGTCCATCTCTTTATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000413724.5
ENST00000415139.5
ENST00000430603.1
ENST00000542547.5
CDS GCA 72 bp CCAGGGAAGCTTCTATCAGCTCTCTCATCCCTGGACTaGAGTCATCTGCAATGTCTTCCAGTGGAGGTGCTT +
Preference number: 6 (lower is better)
Translates to: PGKLLSALSSLD*SHLQCLPVEVL
Trigger: AAGCACCTCCACTGGAAGACATTGCAGATGACTGCAGTCCAGGGATGAGAGAGCTGATAGAAGCTTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS GCA 72 bp ATTGTCACTTCCAGTGCTCATGTACTCCATTACTGTTaGTCTTTCTGGAGAGTCGGGTCTCGGGCAGGGAGA +
Preference number: 6 (lower is better)
Translates to: IVTSSAHVLHYC*SFWRVGSRAGR
Trigger: TCTCCCTGCCCGAGACCCGACTCTCCAGAAAGAGCAACAGTAATGGAGTACATGAGCACTGGAAGTGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413724.5
CDS CCA 72 bp CAAACATGGCATCCTTCAGCCATATTCAAGCGTTGGTaGTCCCCGAACAAGATTGAAGTAGCCAGCCAGAGC +
Preference number: 6 (lower is better)
Translates to: QTWHPSAIFKRW*SPNKIEVASQS
Trigger: GCTCTGGCTGGCTACTTCAATCTTGTTCGGGGACCACCAACGCTTGAATATGGCTGAAGGATGCCATGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CCA 72 bp GAGCAAACATGGCATCCTTCAGCCATATTCAAGCGTTaGTGGTCCCCGAACAAGATTGAAGTAGCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: EQTWHPSAIFKR*WSPNKIEVASQ
Trigger: CTGGCTGGCTACTTCAATCTTGTTCGGGGACCACCAACGCTTGAATATGGCTGAAGGATGCCATGTTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CCA 72 bp TCTTATCTGCAAACAAGATGTGGCTACCTATTCCCCTaGCTTCTTCGCGGTAAGAAGATTGCATCTGCGGCC +
Preference number: 6 (lower is better)
Translates to: SYLQTRCGYLFP*LLRGKKIASAA
Trigger: GGCCGCAGATGCAATCTTCTTACCGCGAAGAAGCCAGGGGAATAGGTAGCCACATCTTGTTTGCAGATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000375322.2
CDS CCA 72 bp CATCCCTGGACTGCAGTCATCTGCAATGTCTTCCAGTaGAGGTGCTTGCTTGTGGATTATGTACAGGTAGGA +
Preference number: 6 (lower is better)
Translates to: HPWTAVICNVFQ*RCLLVDYVQVG
Trigger: TCCTACCTGTACATAATCCACAAGCAAGCACCTCCACTGGAAGACATTGCAGATGACTGCAGTCCAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS CAA 72 bp ACTGCAGTCATCTGCAATGTCTTCCAGTGGAGGTGCTaGCTTGTGGATTATGTACAGGTAGGAGGGATAGGC +
Preference number: 6 (lower is better)
Translates to: TAVICNVFQWRC*LVDYVQVGGIG
Trigger: GCCTATCCCTCCTACCTGTACATAATCCACAAGCAAGCACCTCCACTGGAAGACATTGCAGATGACTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS GCA 72 bp TGGACTGCAGTCATCTGCAATGTCTTCCAGTGGAGGTaGTTGCTTGTGGATTATGTACAGGTAGGAGGGATA +
Preference number: 6 (lower is better)
Translates to: WTAVICNVFQWR*LLVDYVQVGGI
Trigger: TATCCCTCCTACCTGTACATAATCCACAAGCAAGCACCTCCACTGGAAGACATTGCAGATGACTGCAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS GCA 72 bp GGCTTTGCAGATACTGCGTTAGCTTCCTTTCTTATCTaGAAACAAGATGTGGCTACCTATTCCCCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: GFADTALASFLI*KQDVATYSPGF
Trigger: GAAGCCAGGGGAATAGGTAGCCACATCTTGTTTGCAGATAAGAAAGGAAGCTAACGCAGTATCTGCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000375322.2
CDS TCA 72 bp CTGTTGCTCTTTCTGGAGAGTCTCATGAGGTGGTCGTaGGGATTAACAGAGTTCAAGCTCATAAAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: LLLFLESLMRWS*GLTEFKLIKCS
Trigger: TGAGCACTTTATGAGCTTGAACTCTGTTAATCCTCACGACCACCTCATGAGACTCTCCAGAAAGAGCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000375322.2
CDS CCA 72 bp CCAGGAGATCAATGCTGTCTTAATTTAGAGCAAACATaGCATCCTTCAGCCATATTCAAGCGTTGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: PGDQCCLNLEQT*HPSAIFKRWWS
Trigger: GGACCACCAACGCTTGAATATGGCTGAAGGATGCCATGTTTGCTCTAAATTAAGACAGCATTGATCTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000542547.5
CDS TCA 72 bp CATCTAAGCCAAATTCAAACACCACTCTGCATTAAATaGAGCTGCAGTAGGAAAGCTGAGCACATAGCACCC +
Preference number: 6 (lower is better)
Translates to: HLSQIQTPLCIK*SCSRKAEHIAP
Trigger: GGGTGCTATGTGCTCAGCTTTCCTACTGCAGCTTCATTTAATGCAGAGTGGTGTTTGAATTTGGCTTAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS CCA 72 bp GTATGCATGAGTGAGAAAAGTACTGAGTCAGACTCCTaGCTTTGCAGATACTGCGTTAGCTTCCTTTCTTAT +
Preference number: 6 (lower is better)
Translates to: VCMSEKSTESDS*LCRYCVSFLSY
Trigger: ATAAGAAAGGAAGCTAACGCAGTATCTGCAAAGCCAGGAGTCTGACTCAGTACTTTTCTCACTCATGCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263056.6
ENST00000375322.2
CDS TCA 72 bp AGCTGCAGTAGGAAAGCTGAGCACATAGCACCCAACTaGTCGGAAAGAAACGTACCATGTTTAATAAAATTC +
Preference number: 6 (lower is better)
Translates to: SCSRKAEHIAPN*SERNVPCLIKF
Trigger: GAATTTTATTAAACATGGTACGTTTCTTTCCGATCAGTTGGGTGCTATGTGCTCAGCTTTCCTACTGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375322.2
CDS CAA 72 bp GAAGCAAGCCTGGATTTCCACATCAGATGGCTTAAATaGATCTACTGGGATCAGTTTACACGCCATTCTTTT +
Preference number: 6 (lower is better)
Translates to: EASLDFHIRWLK*IYWDQFTRHSF
Trigger: AAAAGAATGGCGTGTAAACTGATCCCAGTAGATCAATTTAAGCCATCTGATGTGGAAATCCAGGCTTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000413724.5
ENST00000415139.5
ENST00000430603.1
ENST00000542547.5
CDS TCA 72 bp GGTCTTCAGATTACAGGAAGGAGCTTGTTTGTCTCCTaGATAACTAGTCTCTTTGAGCCAAAAAGGTATATG +
Preference number: 6 (lower is better)
Translates to: GLQITGRSLFVS*ITSLFEPKRYM
Trigger: CATATACCTTTTTGGCTCAAAGAGACTAGTTATTCAGGAGACAAACAAGCTCCTTCCTGTAATCTGAAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430603.1
CDS CAA 72 bp GTCCATAAAAATGCTTTGCAGTGTTGGATATATGGTTaGCAAAAGCAAGCAAATCCTCCACAGTTCCATATC +
Preference number: 6 (lower is better)
Translates to: VHKNALQCWIYG*QKQANPPQFHI
Trigger: GATATGGAACTGTGGAGGATTTGCTTGCTTTTGCAAACCATATATCCAACACTGCAAAGCATTTTTATGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263056.6
ENST00000375321.1
ENST00000375322.2
ENST00000413724.5
ENST00000415139.5
ENST00000542547.5