RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP3K5 (Homo sapiens)

Ensembl gene IDs: ENSG00000197442

Ensembl transcript IDs: ENST00000359015.5, ENST00000463140.1

Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATaGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAA +
Preference number: 1 (lower is better)
Translates to: RLLEHITNTQKPKQL*SHFGFVPVVHDHMK
Trigger: TTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
3UTR-3UTR GCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGATACTGGATTTAAAGTaGAGCGCCTTTCTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPILDLK*SAFLLS
Trigger: GGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTAT...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
3UTR-3UTR CAA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAAGTTATGGTCACATTTaGGTTTTGTTCCAGTGGTGC +
Preference number: 3 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSESYGHI*VLFQWC
Trigger: GCACCACTGGAACAAAACCAAAATGTGACCATAACT...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GCCTTTCTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTGCCGGGCTAAGCAGCTaGCATCGCGCGCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: AFLLSLRFSHPQEDQLCIAGLSS*HRAPRP
Trigger: AGGGCGCGGCGCGCGATGGCAGCTGCTTAGCCCGGC...AATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAGAAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp CTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTAATTTTCCCCGCCAACAGAGCTaGCCCGGCCTCGGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLSLRFSHPQEDQLCINFPRQQS*PGLGWH
Trigger: GTGCCACCCGAGGCCGGGGCAGCTCTGTTGGCGGGG...AAAATTAATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACGCCTCCCGCAAGCTCTaGAGGGCCTCGCTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHASRKL*RASLSA
Trigger: GGCCGAGAGCGAGGCCCTGCAGAGCTTGCGGGAGGC...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACTGCCGCCCTCGGGGATaGTGCAGAAGCCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHCRPRG*CRSPRG
Trigger: CCCCCTCGGGCTTCTGCACCATCCCCGAGGGCGGCA...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGGGCCTCGGGTGGCACTaGTCGAGGAGGTGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPGLGWH*SRRWPP
Trigger: CGGCGGCCACCTCCTCGAGCAGTGCCACCCGAGGCC...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp GCCTTTCTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTGAGCGTGCTCACGCCTaGGGTAGCCACAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: AFLLSLRFSHPQEDQLCIERAHA*GSHSIF
Trigger: GAAGATGCTGTGGCTACCTCAGGCGTGAGCACGCTC...AATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAGAAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGCCACGTTCCAGAAGCTaGCCGGCGGCGGCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPPRSRS*PAAAVA
Trigger: TGCCACCGCCGCCGCCGGGCAGCTTCTGGAACGTGG...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACTCACATATGCCACCGTaGTCCGTCGGCTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHSHMPP*SVGCPR
Trigger: GCGGGGGCAGCCGACGGACCACGGTGGCATATGTGA...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGCCTCGTCCGCCTCCGTaGTCATCTCTCCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVPRPPP*SSLRAG
Trigger: CCCGGCCCGGAGAGATGAGCACGGAGGCGGACGAGG...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACCGTGGTCCGTCGGCTaGCCCCGCCAACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VMVTFWFCSSGARSHEMLPWSVG*PRQQSC
Trigger: GCAGCTCTGTTGGCGGGGGCAGCCGACGGACCACGG...TAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACTTAGAGTACAAGGGGTaGGGAAGCCGGGTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHLEYKG*GSRVSG
Trigger: CCCGCTCACCCGGCTTCCCCACCCCTTGTACTCTAA...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp GTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTATGCCCCGGCCTCGGGTaGCACTGCTCGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VMVTFWFCSSGARSHEMLCPGLG*HCSRRW
Trigger: CCACCTCCTCGAGCAGTGCCACCCGAGGCCGGGGCA...TAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp GCCTTTCTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTCTGTCAACCCCTTCATaGAGCTGCTGTCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: AFLLSLRFSHPQEDQLCILSTPS*SCCHSS
Trigger: ACTGCTGTGACAGCAGCTTCATGAAGGGGTTGACAG...AATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAGAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTCGCCCTCGGGGATGGTaGAGAAGCCCGAGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETRPRGW*RSPRGR
Trigger: TCGCCCCCTCGGGCTTCTGCACCATCCCCGAGGGCG...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTCCGCCGGACAACCGATaGCAGGGGCAGCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETPPDNR*QGQRRS
Trigger: AGAGCGCCGCTGCCCCTGGCATCGGTTGTCCGGCGG...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGGCAGGGTTTCCAGGGTaGCGCCCACTGTCTCGCACG +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVAGFPG*RPLSRT
Trigger: CGTGCGAGACAGTGGGCGCCACCCTGGAAACCCTGC...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACACTCACTGCTGCTGCTaGTGTCCTCCACCAGCACAG +
Preference number: 4 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHTHCCC*CPPPAQ
Trigger: CTGTGCTGGTGGAGGACACCAGCAGCAGCAGTGAGT...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTGTGGCACAGAGAAAGTaGTGCCCTCGTCCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCVAQRK*CPRPPP
Trigger: CGGAGGCGGACGAGGGCATCACTTTCTCTGTGCCAC...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCACCGCTCCTCCCCTCCTaGAGATGCCGCCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSPLLPS*RCRPRG
Trigger: TCCCCGAGGGCGGCATCTGCAGGAGGGGAGGAGCGG...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp GTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACACTGCTCGAGGAGGTaGCCGCCGGACAACCGATGC +
Preference number: 4 (lower is better)
Translates to: VMVTFWFCSSGARSHEMLHCSRR*PPDNRC
Trigger: GCATCGGTTGTCCGGCGGCCACCTCCTCGAGCAGTG...TAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACTCTTCATGCAGGGGCTaGGAGTATCTGCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHSSCRG*EYLLSL
Trigger: GAGAGACAGCAGATACTCTCAGCCCCTGCATGAAGA...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGCGTACTCACTGCTGCTaGTGGTGTCCTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPRTHCC*WCPPPA
Trigger: TGCTGGTGGAGGACACCAGCAGCAGCAGTGAGTACG...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp GCCTTTCTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTTCTGGGATCTCAGGGTaGACTTTAAACATTCCCACC +
Preference number: 4 (lower is better)
Translates to: AFLLSLRFSHPQEDQLCISGISG*TLNIPT
Trigger: GGTGGGAATGTTTAAAGTCCACCCTGAGATCCCAGA...AATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAGAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp CTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTAATTTTGTGTCCGAATTCCCTTaGCATCTCTTTCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LLSLRFSHPQEDQLCINFVSEFP*HLFLRR
Trigger: CCTGCGGAGAAAGAGATGTCAAGGGAATTCGGACAC...AAAATTAATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTATCGGCCACCACCAGTTaGCCTTGGCTCGCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: VMVTFWFCSSGARSHEMLSATTS*PWLASL
Trigger: CAACGAAGCGAGCCAAGGGCAACTGGTGGTGGCCGA...TAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGAGCCGTACTCACTGCTaGTGCTGGTGTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVSRTHC*CWCPPP
Trigger: TGGTGGAGGACACCAGCAGCAGCAGTGAGTACGGCT...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTCTGAGCCGTACTCACTaGTGCTGCTGGTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCLSRTH*CCWCPP
Trigger: TGGAGGACACCAGCAGCAGCAGTGAGTACGGCTCAG...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACCAAGAGGTAAGCAGATaGGTCCAAGAAGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHQEVSR*VQEAAR
Trigger: TCGAGCTGCTTCTTGGACCCATCTGCTTACCTCTTG...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGCTCTCATGTGGTCATTaGCTAGGACGCTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVLSCGH*LGRWPP
Trigger: TGGGGGCCAGCGTCCTAGCCAATGACCACATGAGAG...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp CTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTAATTTTGCCAGCAAGCCTCTTTaGTGTTCCGAAGTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: LLSLRFSHPQEDQLCINFASKPL*CSEVRD
Trigger: ATCTCTGACTTCGGAACATCAAAGAGGCTTGCTGGC...AAAATTAATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACTCTCAGATGCAAGGCTaGAATGTGGCCTTAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHSQMQG*NVALVL
Trigger: CAGAACTAAGGCCACATTTCAGCCTTGCATCTGAGA...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTCGAGTTTCCCAAAATaGAGGGTTTCCAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPSSFPK*RVSRVA
Trigger: CGCCACCCTGGAAACCCTGCATTTTGGGAAACTCGA...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GCCTTTCTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTATTTCCTTCAGTGACTaGAGAGAGTCCGAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: AFLLSLRFSHPQEDQLCIISFSD*RESELV
Trigger: TACTAACTCGGACTCTCTGCAGTCACTGAAGGAAAT...AATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGGAATGCCTTGGCCTCTaGAGACATGGACTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPECLGL*RHGLWD
Trigger: ATCCCAGAGTCCATGTCTGCAGAGGCCAAGGCATTC...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp GTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACTTGGCTCGCTTCGTTaGTCACATATGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: VMVTFWFCSSGARSHEMLLGSLR*SHMPPW
Trigger: CCACGGTGGCATATGTGATCAACGAAGCGAGCCAAG...TAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGCGAAGTTCGGTTGCATaGGCTCTGTCAACCCCTTCA +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVRSSVA*ALSTPS
Trigger: TGAAGGGGTTGACAGAGCTCATGCAACCGAACTTCG...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTTCCGTCAGGATCCTGTaGAGGGTAGCTCGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETSVRIL*RVARLS
Trigger: TGAGAGGCGAGCTACCCTTCACAGGATCCTGACGGA...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGCCACAGCATCTTCAATaGCAGCCTGAGGTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVPQHLQ*QPEVFG
Trigger: TCCGAAGACCTCAGGCTGTCATTGAAGATGCTGTGG...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGAAGCTGTACATTCAGTaGCCGGTGAGCACTCTGGGA +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVKLYIQ*PVSTLG
Trigger: TCCCAGAGTGCTCACCGGTCACTGAATGTACAGCTT...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp GCCTTTCTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTTCTTCAATAGCTCGATaGAGGAGTGCTTGTAATTCT +
Preference number: 4 (lower is better)
Translates to: AFLLSLRFSHPQEDQLCISSIAR*RSACNS
Trigger: AGAATTACAAGCACTCCTTCATCGAGCTATTGAAGA...AATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGAGCTCGAAGTTCGGTTaGATGAGCTCTGTCAACCCC +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVSSKFG*MSSVNP
Trigger: GGGGTTGACAGAGCTCATGCAACCGAACTTCGAGCT...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GCCTTTCTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTATATTATCTACTCGCTaGCGAATTCTTGCCAACTCA +
Preference number: 4 (lower is better)
Translates to: AFLLSLRFSHPQEDQLCIILSTR*RILANS
Trigger: TGAGTTGGCAAGAATTCGGCAGCGAGTAGATAATAT...AATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACCTTCCTCCAGGGACCTaGTCCATGAAGATTTTAATG +
Preference number: 4 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHLPPGT*SMKILM
Trigger: CATTAAAATCTTCATGGAGCAGGTCCCTGGAGGAAG...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGCAGAGACCAGATGTCTaGTGCTTTTCCGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPQRPDV*CFSVAS
Trigger: AGAGGCTACGGAAAAGCAGCAGACATCTGGTCTCTG...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCACGAGGGGGCGAAGGGTaGCACAGAGAAAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSRGGEG*HRESDA
Trigger: GGCATCACTTTCTCTGTGCCACCCTTCGCCCCCTCG...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGACCACCAGTTGCCCTTaGCTCGCTTCGTTGATCACA +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVTTSCP*LASLIT
Trigger: TGTGATCAACGAAGCGAGCCAAGGGCAACTGGTGGT...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGAGCGGTCCAGCACGGTaGTTTCTCCAAAGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVSGPAR*FLQSRV
Trigger: AACTCGACTTTGGAGAAACCACCGTGCTGGACCGCT...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp GCCTTTCTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTTCTGCTGTCTCTCTCTaGGATTTCCTTAATAGCAAT +
Preference number: 4 (lower is better)
Translates to: AFLLSLRFSHPQEDQLCISAVSL*DFLNSN
Trigger: ATTGCTATTAAGGAAATCCCAGAGAGAGACAGCAGA...AATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCACTTGGCTAATGCCATaGCTGTCGAAGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WSHFGFVPVVHDHMKCYITWLMP*LSKSSS
Trigger: GGAGCTGGACTTCGACAGCCATGGCATTAGCCAAGT...GATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCAGTACCACCTGGACTTaGCTAATGCCATGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: WSHFGFVPVVHDHMKCYISTTWT*LMPWLS
Trigger: CGACAGCCATGGCATTAGCCAAGTCCAGGTGGTACT...GATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp GCCTTTCTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTGTTATGGTCACATTTTaGTTTTGTTCCAGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: AFLLSLRFSHPQEDQLCIVMVTF*FCSSGA
Trigger: TGCACCACTGGAACAAAACCAAAATGTGACCATAAC...AATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGCTGTGGCCATTTCAATaGTTGTACAGCCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVLWPFQ*LYSPET
Trigger: GGTCTCTGGGCTGTACAATCATTGAAATGGCCACAG...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTGCACTCTGGGAATCATaGGACACAGTAGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCALWES*DTVELS
Trigger: GCTCAGTTCTACTGTGTCTCATGATTCCCAGAGTGC...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGTCGCTGCCGAATTCTTaGCAACTCAGCTGCCAATTC +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVSLPNS*QLSCQF
Trigger: GAATTGGCAGCTGAGTTGGCAAGAATTCGGCAGCGA...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTGGAGCTTCCTTTTCTTaGCCGGCTGACAAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETGASFS*PADKSA
Trigger: AGCCGACTTGTCAGCCGGCCAAGAAAAGGAAGCTCC...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp GTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACCACAAGTTCTTGCTTaGCCACAGGCTGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: VMVTFWFCSSGARSHEMLPQVLA*PQAVLW
Trigger: CCACAGAACAGCCTGTGGCCAAGCAAGAACTTGTGG...TAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGTGCAGACATGGACTCTaGGATCTCAGGGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVCRHGL*DLRVDF
Trigger: AAAGTCCACCCTGAGATCCCAGAGTCCATGTCTGCA...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp CTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTAATTTTGAAGGCTGTTCCTCATaGTCATCTTCTACATCCAAG +
Preference number: 4 (lower is better)
Translates to: LLSLRFSHPQEDQLCINFEGCSS*SSSTSK
Trigger: CTTGGATGTAGAAGATGACCATGAGGAACAGCCTTC...AAAATTAATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGACTTGGCTCTTGTTTTaGAAGAGAAGGGGTCCACTT +
Preference number: 4 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPTWLLF*KRRGPL
Trigger: AAGTGGACCCCTTCTCTTTCAAAACAAGAGCCAAGT...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTACAGTGTGGTGGCTATaGTTTTTCGGTCAGTGGATC +
Preference number: 4 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCTVWWL*FFGQWI
Trigger: GATCCACTGACCGAAAAATCATAGCCACCACACTGT...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGCTCCAGTTTCAGCTTTaGCAGTGTGGTGGCTATGAT +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVLQFQL*QCGGYD
Trigger: ATCATAGCCACCACACTGTCAAAGCTGAAACTGGAG...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGACATCCAGTGCGGCTTaGTGTTATGATTCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPTSSAA*CYDSEE
Trigger: TTCTTCGGAATCATAACATCAAGCCGCACTGGATGT...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTCACCACCGCAATATCTaGATTGTAAAAGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCHHRNI*IVKAVQ
Trigger: CTGGACCGCTTTTACAATGCAGATATTGCGGTGGTG...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCAAAACTGGTGTCCAGCTaGCAGGAGGAGGACCGCATA +
Preference number: 4 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSKLVSS*QEEDRI
Trigger: TATGCGGTCCTCCTCCTGGCAGCTGGACACCAGTTT...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAGCTCAAGTCCCGACCTaGGTAGACTATCCCATAAGT +
Preference number: 4 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSEAQVPT*VDYPIS
Trigger: ACTTATGGGATAGTCTACGCAGGTCGGGACTTGAGC...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAGGGGCTGAGAGTATCTaGTGTCTCTCTCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSEGAESI*CLSLGF
Trigger: AAATCCCAGAGAGAGACAGCAGATACTCTCAGCCCC...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp CTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTAATTTTCAGGTGTTTATGCAATaGTATTTCTTCATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLSLRFSHPQEDQLCINFQVFMQ*YFFMQG
Trigger: CCCCTGCATGAAGAAATAGCATTGCATAAACACCTG...AAAATTAATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCACCTTGAACATAGCTaGTTGTGGTTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: WSHFGFVPVVHDHMKCYIHLEHS*LWFSQF
Trigger: GAACTGGGAGAACCACAAGCAGCTATGTTCAAGGTG...GATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCATGGCCTCTGCAGACATaGACTCTGGGATCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSWPLQT*TLGSQG
Trigger: ACCCTGAGATCCCAGAGTCCATGTCTGCAGAGGCCA...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp GTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTATGTTGTTGGCCATGCTaGAACTTTCTCTCACCCCAA +
Preference number: 4 (lower is better)
Translates to: VMVTFWFCSSGARSHEMLCCWPC*NFLSPQ
Trigger: TTGGGGTGAGAGAAAGTTTCAGCATGGCCAACAACA...TAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTCAAAACATTTCAGTATaGATGCCTTGGCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCQNISV*MPWPLQ
Trigger: CTGCAGAGGCCAAGGCATTCATACTGAAATGTTTTG...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGGAAGGAGGAGCACTGTaGTCTTCAAAATTCTCATCT +
Preference number: 4 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPEGGAL*SSKFSS
Trigger: AGATGAGAATTTTGAAGATCACAGTGCTCCTCCTTC...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAGGTCTTCGGACAGTTTaGTTTGAAGGCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSEGLRTV*FEGCSS
Trigger: TGAGGAACAGCCTTCAAATCAAACTGTCCGAAGACC...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCATTCGTTGATCACATATaGCACCGTGGTCCGTCGGCT +
Preference number: 4 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSFVDHI*HRGPSA
Trigger: AGCCGACGGACCACGGTGGCATATGTGATCAACGAA...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTCTTGCCAACTCAGCTaGCAATTCTTTACCAGTGTA +
Preference number: 4 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPSCQLS*QFFTSV
Trigger: TACACTGGTAAAGAATTGGCAGCTGAGTTGGCAAGA...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGAGTATCACTCTCAGATaGAAGGCTGAAATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVSITLR*KAEMWP
Trigger: AGGCCACATTTCAGCCTTGCATCTGAGAGTGATACT...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTAAGGAAGATTCAAACTaGTGTCCAGCTGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETKEDSN*CPAARR
Trigger: CCTCCTGGCAGCTGGACACCAGTTTGAATCTTCCTT...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTCTCACAATTTTGTCTTaGTCTTCCGTCAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCLTILS*SSVRIL
Trigger: CAGGATCCTGACGGAAGACCAAGACAAAATTGTGAG...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCTTTCAGATGCTTGAATaGCTCTCATGTGGTCATTGG +
Preference number: 4 (lower is better)
Translates to: WSHFGFVPVVHDHMKCYIFQMLE*LSCGHW
Trigger: CCAATGACCACATGAGAGTCATTCAAGCATCTGAAA...GATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTGTACCGCCTTCCGAATaGTACTGTCTAAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETVPPSE*YCLRQT
Trigger: TGTTTGCCTTAGACAGTATCATTCGGAAGGCGGTAC...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAGTACTGGCTAGAACTTaGTTGTGCCACCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSEVLART*LCHLQK
Trigger: CTTTTGAAGGTGGCACAAGCAAGTTCTAGCCAGTAC...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTAAGTCCACAAGTTCTTaGTTGGCCACAGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETKSTSS*LATGCS
Trigger: AGAACAGCCTGTGGCCAAGCAAGAACTTGTGGACTT...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTCAGTACAGGGGTTTATaGCAGCAAGCCTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETQYRGL*QQASLM
Trigger: CATCAAAGAGGCTTGCTGGCATAAACCCCTGTACTG...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTAACCAAGAAGCTCCATaGTCTCTGCTTTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETNQEAP*SLLSVS
Trigger: GGACACTGAAAGCAGAGACCATGGAGCTTCTTGGTT...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGCTTGAGGTACCATGCTaGTGTCTTCAGTTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPLEVPC*CLQFKK
Trigger: CTTTTTAAACTGAAGACACCAGCATGGTACCTCAAG...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTTAATGGACCCCATTTaGAACGAAGGAGAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCLMDPI*NEGEQK
Trigger: TTTCTGCTCTCCTTCGTTCCAAATGGGGTCCATTAA...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCTTATTGACAGCATCTTaGAAACCAAAGAGTACCACC +
Preference number: 4 (lower is better)
Translates to: WSHFGFVPVVHDHMKCYILLTAS*KPKSTT
Trigger: GGTGGTACTCTTTGGTTTTCAAGATGCTGTCAATAA...GATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCTGCGGCTTGATGTTATaGTTCCGAAGAACTTTATTG +
Preference number: 4 (lower is better)
Translates to: WSHFGFVPVVHDHMKCYICGLML*FRRTLL
Trigger: CAATAAAGTTCTTCGGAATCATAACATCAAGCCGCA...GATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCATCGGACAGTTTGATTTaGAGGCTGTTCCTCATGGTC +
Preference number: 4 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSSDSLI*RLFLMV
Trigger: GACCATGAGGAACAGCCTTCAAATCAAACTGTCCGA...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAATGGTGCACGATCACATaGAATGTTACATCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSEWCTIT*NVTSVL
Trigger: CAAAACGGATGTAACATTTCATGTGATCGTGCACCA...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTGCTAGAACTTGCTTGTaGCACCTTCAAAAGTTGAAT +
Preference number: 4 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCARTCL*HLQKLN
Trigger: ATTCAACTTTTGAAGGTGGCACAAGCAAGTTCTAGC...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGAGACTATCCCATAAGTaGCTTTTCCTAAAACGACTC +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVRLSHK*LFLKRL
Trigger: GAGTCGTTTTAGGAAAAGGCACTTATGGGATAGTCT...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTGCTTCAGGTGTTTATaGAATGCTATTTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPCFRCL*NAISSC
Trigger: GCATGAAGAAATAGCATTGCATAAACACCTGAAGCA...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGATCTATTATTTCTGGTaGCATATACTGGAGGGTACC +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVIYYFW*HILEGT
Trigger: GGTACCCTCCAGTATATGGCACCAGAAATAATAGAT...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACATTTCAGTATGAATaGCTTGGCCTCTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSETFQYE*LGLCRH
Trigger: ATGTCTGCAGAGGCCAAGGCATTCATACTGAAATGT...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCTACAGTTCAAGCATGTaGAACTGGTACAGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: WSHFGFVPVVHDHMKCYIYSSSM*NWYSSV
Trigger: TACTGAACTGTACCAGTTGCACATGCTTGAACTGTA...GATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCGAACATAGCTGCTTGTaGTTCTCCCAGTTCATAAAA +
Preference number: 4 (lower is better)
Translates to: WSHFGFVPVVHDHMKCYIEHSCL*FSQFIK
Trigger: TTTTATGAACTGGGAGAACCACAAGCAGCTATGTTC...GATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp GTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTAGGAATTTCTATGGGTTaGGACTTAAGCTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VMVTFWFCSSGARSHEMLGISMG*DLSFRC
Trigger: ACACCTGAAGCTTAAGTCCCAACCCATAGAAATTCC...TAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGTCAAGCATGTGCAACTaGTACAGTTCAGTAGTACAT +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVSSMCN*YSSVVH
Trigger: ATGTACTACTGAACTGTACCAGTTGCACATGCTTGA...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAGCCACCTTCAAAAGTTaGATAAAACGATCCACAAGA +
Preference number: 4 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSEATFKS*IKRSTR
Trigger: TCTTGTGGATCGTTTTATTCAACTTTTGAAGGTGGC...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCACGAAGTCAGAGATCTTaGGAACACCACTGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSRSQRS*EHHCRY
Trigger: ATACCTACAGTGGTGTTCTCAAGATCTCTGACTTCG...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAATGTCCTTCCTCAGCATaGAGAATCCAGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSECPSSA*RIQNLF
Trigger: AAAAAGATTCTGGATTCTTCATGCTGAGGAAGGACA...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGTCCGAAGAACTTTATTaGCAGCATCTTGAAAACCAA +
Preference number: 4 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVSEELY*QHLENQ
Trigger: TTGGTTTTCAAGATGCTGTCAATAAAGTTCTTCGGA...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp GTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCGAAGATTAGATTaGGCAACAGTCAAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VMVTFWFCSSGARSHEMLHRRLD*ATVKSV
Trigger: AACAGACTTGACTGTTGCTCAATCTAATCTTCGATG...TAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTTGTCCTTCGCTTTaGACCATGGGAATCATAATA +
Preference number: 4 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSETCPSL*TMGIII
Trigger: TATTATGATTCCCATGGTGCAAAGCGAAGGACAAGT...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAAATTCTCATCTGGAATaGCCAAAAAGAGTGTCCGAA +
Preference number: 4 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSENSHLE*PKRVSE
Trigger: TTCGGACACTCTTTTTGGGCATTCCAGATGAGAATT...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTAAATTCTCTGAGGCTTaGAATGAGGGTTGTGATGTG +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETKFSEA*NEGCDV
Trigger: CACATCACAACCCTCATTGCAAGCCTCAGAGAATTT...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCAATACTGGATTTAAAGTaGAGCGCCTTTCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSILDLK*SAFLLS
Trigger: GGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTAT...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCAGAAGTAAAAACCATTaGTCTCAGATTCTGCACACT +
Preference number: 4 (lower is better)
Translates to: WSHFGFVPVVHDHMKCYIRSKNH*SQILHT
Trigger: AGTGTGCAGAATCTGAGAGCAATGGTTTTTACTTCT...GATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCAATAGCAATTCTGACTTaGTTGCTCAAGTCCCGACCT +
Preference number: 4 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSIAILT*LLKSRP
Trigger: AGGTCGGGACTTGAGCAACCAAGTCAGAATTGCTAT...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCAAAGAGCCCAGATACTaGACAATATTTTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: WSHFGFVPVVHDHMKCYIKEPRY*TIFLCF
Trigger: GAAGCACAAAAATATTGTCCAGTATCTGGGCTCTTT...GATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTTCTGGTGCCATATACTaGAGGGTACCAGTAAAAGTT +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETSGAIY*RVPVKV
Trigger: AACTTTTACTGGTACCCTCCAGTATATGGCACCAGA...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCAAGCTTTTCAGATGCTTaGATGACTCTCATGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSSFSDA*MTLMWS
Trigger: TGACCACATGAGAGTCATTCAAGCATCTGAAAAGCT...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTGCAAGGATATACTCCTaGGATATTCATTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETARIYS*DIHLIQ
Trigger: CTGGATCAAATGAATATCTCAGGAGTATATCCTTGC...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTAAAAAGCTTTTCAGATaGTTGAATGACTCTCATGTG +
Preference number: 4 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCKKLFR*LNDSHV
Trigger: CACATGAGAGTCATTCAAGCATCTGAAAAGCTTTTT...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTAGACTTGAGGTACCATaGTGGTGTCTTCAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETRLEVP*WCLQFK
Trigger: TTTAAACTGAAGACACCAGCATGGTACCTCAAGTCT...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAACTTCATCAGGAAGCACGTaGCAAATAGAGATTGTCTTT +
Preference number: 4 (lower is better)
Translates to: YSSVVHKRLKQMYDRSETSSGST*QIEIVF
Trigger: AAAGACAATCTCTATTTGGCACGTGCTTCCTGATGA...AGTTTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CCA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTTTTCCGTAGCCTCTTaGTCCTTTATCTATTATTTC +
Preference number: 4 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCFSVAS*SFIYYF
Trigger: GAAATAATAGATAAAGGACCAAGAGGCTACGGAAAA...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR TCA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCAATTCAAATGCCTTTTTaGACCAAGAAGCTCCATGGT +
Preference number: 4 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSIQMPF*TKKLHG
Trigger: ACCATGGAGCTTCTTGGTTCAAAAAGGCATTTGAAT...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR GCA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAACCTATTCAGTGCAAATaGATAATGAAACTTCACATG +
Preference number: 4 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSEPIQCK*IMKLHM
Trigger: CATGTGAAGTTTCATTATGCATTTGCACTGAATAGG...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 90 bp GACAACCGATGCCAGGGGCAGCGGCGCTCTCCACGTTCCAGAAGCTaGCCGGCGGCGGCGGTGGCAGCTGGTGCTCCTCGCCCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: DNRCQGQRRSPRSRS*PAAAVAAGAPRPRP
Trigger: TGGGCGAGGGCGAGGAGCACCAGCTGCCACCGCCGCCGCCGGGCAGCTTCTGGAACGTGGAGAGCGCCGCTGCCCCTGGCATCGGTTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CCA 90 bp CGCCAACAGAGCTGCCCCGGCCTCGGGTGGCACTGCTCGAGGAGGTaGCCGCCGGACAACCGATGCCAGGGGCAGCGGCGCTCTCCACGT +
Preference number: 5 (lower is better)
Translates to: RQQSCPGLGWHCSRR*PPDNRCQGQRRSPR
Trigger: ACGTGGAGAGCGCCGCTGCCCCTGGCATCGGTTGTCCGGCGGCCACCTCCTCGAGCAGTGCCACCCGAGGCCGGGGCAGCTCTGTTGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS TCA 90 bp GGATGGTGCAGAAGCCCGAGGGGGCGAAGGGTGGCACAGAGAAAGTaGTGCCCTCGTCCGCCTCCGTGCTCATCTCTCCGGGCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: GWCRSPRGRRVAQRK*CPRPPPCSSLRAGQ
Trigger: CTGCCCGGCCCGGAGAGATGAGCACGGAGGCGGACGAGGGCATCACTTTCTCTGTGCCACCCTTCGCCCCCTCGGGCTTCTGCACCATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 90 bp CTCGGCCACCACCAGTTGCCCTTGGCTCGCTTCGTTGATCACATATaGCACCGTGGTCCGTCGGCTGCCCCCGCCAACAGAGCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: LGHHQLPLARFVDHI*HRGPSAAPANRAAP
Trigger: CGGGGCAGCTCTGTTGGCGGGGGCAGCCGACGGACCACGGTGGCATATGTGATCAACGAAGCGAGCCAAGGGCAACTGGTGGTGGCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 90 bp GCCTCCCGCAAGCTCTGCAGGGCCTCGCTCTCGGCCACCACCAGTTaGCCTTGGCTCGCTTCGTTGATCACATATGCCACCGTGGTCCGT +
Preference number: 5 (lower is better)
Translates to: ASRKLCRASLSATTS*PWLASLITYATVVR
Trigger: ACGGACCACGGTGGCATATGTGATCAACGAAGCGAGCCAAGGGCAACTGGTGGTGGCCGAGAGCGAGGCCCTGCAGAGCTTGCGGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CCA 90 bp CGTGGCCGCGCCGCTCGCCCTCTGCAGAGTTTAGAGTACAAGGGGTaGGGAAGCCGGGTGAGCGGGAAGGGACGGAGCTTCCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: RGRAARPLQSLEYKG*GSRVSGKGRSFLFL
Trigger: CAAGAAAAGGAAGCTCCGTCCCTTCCCGCTCACCCGGCTTCCCCACCCCTTGTACTCTAAACTCTGCAGAGGGCGAGCGGCGCGGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 90 bp AAGCGGTCCAGCACGGTGGTTTCTCCAAAGTCGAGTTTCCCAAAATaGAGGGTTTCCAGGGTGGCGCCCACTGTCTCGCACGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: KRSSTVVSPKSSFPK*RVSRVAPTVSHASR
Trigger: GCGGGAGGCGTGCGAGACAGTGGGCGCCACCCTGGAAACCCTGCATTTTGGGAAACTCGACTTTGGAGAAACCACCGTGCTGGACCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 90 bp CTTTCAACTCCGTGTCGGGTGAAACTGAGCCGTACTCACTGCTGCTaGTGGTGTCCTCCACCAGCACAGGTACCGGCAAGGATATACTCC +
Preference number: 5 (lower is better)
Translates to: LSTPCRVKLSRTHCC*WCPPPAQVPARIYS
Trigger: GGAGTATATCCTTGCCGGTACCTGTGCTGGTGGAGGACACCAGCAGCAGCAGTGAGTACGGCTCAGTTTCACCCGACACGGAGTTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS TCA 90 bp ACTCTGGGAATCATGAGACACAGTAGAACTGAGCGTGCTCACGCCTaGGGTAGCCACAGCATCTTCAATGACAGCCTGAGGTCTTCGGAC +
Preference number: 5 (lower is better)
Translates to: TLGIMRHSRTERAHA*GSHSIFNDSLRSSD
Trigger: GTCCGAAGACCTCAGGCTGTCATTGAAGATGCTGTGGCTACCTCAGGCGTGAGCACGCTCAGTTCTACTGTGTCTCATGATTCCCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 90 bp ACAAGAGGTAAGCAGATGGGTCCAAGAAGCAGCTCGAAGTTCGGTTaGATGAGCTCTGTCAACCCCTTCATGAAGCTGCTGTCACAGCAG +
Preference number: 5 (lower is better)
Translates to: TRGKQMGPRSSSKFG*MSSVNPFMKLLSQQ
Trigger: CTGCTGTGACAGCAGCTTCATGAAGGGGTTGACAGAGCTCATGCAACCGAACTTCGAGCTGCTTCTTGGACCCATCTGCTTACCTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CCA 90 bp TCTCCACCACCGCAATATCTGCATTGTAAAAGCGGTCCAGCACGGTaGTTTCTCCAAAGTCGAGTTTCCCAAAATGCAGGGTTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: SPPPQYLHCKSGPAR*FLQSRVSQNAGFPG
Trigger: CCCTGGAAACCCTGCATTTTGGGAAACTCGACTTTGGAGAAACCACCGTGCTGGACCGCTTTTACAATGCAGATATTGCGGTGGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGCTCGGCCACCACCAGTaGCCCTTGGCTCGCTTCGTT +
Preference number: 5 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPLGHHQ*PLARFV
Trigger: AACGAAGCGAGCCAAGGGCAACTGGTGGTGGCCGAG...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTAATTTTACTCTCATGTGGTCATaGGCTAGGACGCTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LLSLRFSHPQEDQLCINFTLMWS*ARTLAP
Trigger: GGGGGCCAGCGTCCTAGCCAATGACCACATGAGAGT...AAAATTAATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACCAGCTCGAAGTTCGGTaGCATGAGCTCTGTCAACCC +
Preference number: 5 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHQLEVR*HELCQP
Trigger: GGGTTGACAGAGCTCATGCAACCGAACTTCGAGCTG...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp GCCTTTCTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTTTCAGTATGAATGCCTaGGCCTCTGCAGACATGGAC +
Preference number: 5 (lower is better)
Translates to: AFLLSLRFSHPQEDQLCIFSMNA*ASADMD
Trigger: GTCCATGTCTGCAGAGGCCAAGGCATTCATACTGAA...AATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAGAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTAATTTTCCTTGGCTCGCTTCGTaGATCACATATGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: LLSLRFSHPQEDQLCINFPWLAS*ITYATV
Trigger: CACGGTGGCATATGTGATCAACGAAGCGAGCCAAGG...AAAATTAATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACCTCGCTGCCGAATTCTaGCCAACTCAGCTGCCAATT +
Preference number: 5 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHLAAEF*PTQLPI
Trigger: AATTGGCAGCTGAGTTGGCAAGAATTCGGCAGCGAG...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACTCCACAAGTTCTTGCTaGGCCACAGGCTGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHSTSSC*ATGCSV
Trigger: CACAGAACAGCCTGTGGCCAAGCAAGAACTTGTGGA...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTAATTTTGCAATTCTGACTTGGTaGCTCAAGTCCCGACCTGCG +
Preference number: 5 (lower is better)
Translates to: LLSLRFSHPQEDQLCINFAILTW*LKSRPA
Trigger: CGCAGGTCGGGACTTGAGCAACCAAGTCAGAATTGC...AAAATTAATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS TCA 90 bp TTGGCTAATGCCATGGCTGTCGAAGTCCAGCTCCAGTTTCAGCTTTaGCAGTGTGGTGGCTATGATTTTTCGGTCAGTGGATCTCACAAA +
Preference number: 5 (lower is better)
Translates to: LANAMAVEVQLQFQL*QCGGYDFSVSGSHK
Trigger: TTTGTGAGATCCACTGACCGAAAAATCATAGCCACCACACTGTCAAAGCTGAAACTGGAGCTGGACTTCGACAGCCATGGCATTAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359015.5
ENST00000463140.1
CDS TCA 90 bp TCCCGGAAGTACTGGCTAGAACTTGCTTGTGCCACCTTCAAAAGTTaGATAAAACGATCCACAAGAGGTAAGCAGATGGGTCCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: SRKYWLELACATFKS*IKRSTRGKQMGPRS
Trigger: GCTTCTTGGACCCATCTGCTTACCTCTTGTGGATCGTTTTATTCAACTTTTGAAGGTGGCACAAGCAAGTTCTAGCCAGTACTTCCGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 90 bp TTTGTGGCCTCGACCAGGAAATCCATCCAAAAGTCCACAAGTTCTTaGTTGGCCACAGGCTGTTCTGTGGTCAGTTTCACAAAATGCTTA +
Preference number: 5 (lower is better)
Translates to: FVASTRKSIQKSTSS*LATGCSVVSFTKCL
Trigger: TAAGCATTTTGTGAAACTGACCACAGAACAGCCTGTGGCCAAGCAAGAACTTGTGGACTTTTGGATGGATTTCCTGGTCGAGGCCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAACACCACCAGTTGCCCTaGGCTCGCTTCGTTGATCAC +
Preference number: 5 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSEHHQLP*ARFVDH
Trigger: GTGATCAACGAAGCGAGCCAAGGGCAACTGGTGGTG...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTAATTTTAAAGTCCACAAGTTCTaGCTTGGCCACAGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LLSLRFSHPQEDQLCINFKVHKF*LGHRLF
Trigger: GAACAGCCTGTGGCCAAGCAAGAACTTGTGGACTTT...AAAATTAATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CAAATACTGGATTTAAAGTGCAGCGCCTTTCTCCTCTCCCTTCGATTTTCCCACAGGTTTCTCACAATTTaGTCTTGGTCTTCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: QILDLKCSAFLLSLRFSHRFLTI*SWSSVR
Trigger: CCTGACGGAAGACCAAGACAAAATTGTGAGAAACCT...GTGGGAAAATCGAAGGGAGAGGAGAAAGGCGCTGCACTTTAAATCCAGTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAAGAGTACCACCTGGACTaGGCTAATGCCATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSEEYHLD*ANAMAV
Trigger: GACAGCCATGGCATTAGCCAAGTCCAGGTGGTACTC...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGCTGGCTAGAACTTGCTaGTGCCACCTTCAAAAGTTG +
Preference number: 5 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPLARTC*CHLQKL
Trigger: CAACTTTTGAAGGTGGCACAAGCAAGTTCTAGCCAG...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTAATTTTTCATGTATACCTTTCTaGTCATCAGGAAGCACGTGC +
Preference number: 5 (lower is better)
Translates to: LLSLRFSHPQEDQLCINFSCIPF*SSGSTC
Trigger: GCACGTGCTTCCTGATGACAAGAAAGGTATACATGA...AAAATTAATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp GCCTTTCTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTCTTTTCCGTAGCCTCTaGGTCCTTTATCTATTATTT +
Preference number: 5 (lower is better)
Translates to: AFLLSLRFSHPQEDQLCILFRSL*VLYLLF
Trigger: AAATAATAGATAAAGGACCAAGAGGCTACGGAAAAG...AATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGCTTTCTCCGCAGGACTaGGCTCTTGTTTTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPLSPQD*ALVLKE
Trigger: CTCTTTCAAAACAAGAGCCAAGTCCTGCGGAGAAAG...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 90 bp CGACCAACTAGGCAATACATATCTGAAGCAACTTGTCCTTCGCTTTaGACCATGGGAATCATAATATCAAGAGCTTTTGCTCTGTCACCA +
Preference number: 5 (lower is better)
Translates to: RPTRQYISEATCPSL*TMGIIISRAFALSP
Trigger: TGGTGACAGAGCAAAAGCTCTTGATATTATGATTCCCATGGTGCAAAGCGAAGGACAAGTTGCTTCAGATATGTATTGCCTAGTTGGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CTCCTCTCCCTTCGATTTTCCCACCCCCAAGAAGATCAGCTCTGTATTAATTTTAACTTGTCCTTCGCTTaGCACCATGGGAATCATAAT +
Preference number: 5 (lower is better)
Translates to: LLSLRFSHPQEDQLCINFNLSFA*HHGNHN
Trigger: ATTATGATTCCCATGGTGCAAAGCGAAGGACAAGTT...AAAATTAATACAGAGCTGATCTTCTTGGGGGTGGGAAAATCGAAGGGAGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp TTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTTTGTGGTCTCTACAATAGACTaGAGGTACCATGCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: FGFVPVVHDHMKCYIRFVVSTID*RYHAGV
Trigger: GACACCAGCATGGTACCTCAAGTCTATTGTAGAGAC...CACAAAACGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGCTTGAACATAGCTGCTaGTGGTTCTCCCAGTTCATA +
Preference number: 5 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPLEHSC*WFSQFI
Trigger: TATGAACTGGGAGAACCACAAGCAGCTATGTTCAAG...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp TGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCGACTTGGCTCTTGTTTaGAAAGAGAAGGGGTCCACT +
Preference number: 5 (lower is better)
Translates to: WSHFGFVPVVHDHMKCYIDLALV*KEKGST
Trigger: AGTGGACCCCTTCTCTTTCAAAACAAGAGCCAAGTC...GATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGTTCGGACAGTTTGATTaGAAGGCTGTTCCTCATGGT +
Preference number: 5 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPFGQFD*KAVPHG
Trigger: ACCATGAGGAACAGCCTTCAAATCAAACTGTCCGAA...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 90 bp TTGTCCTTCGCTTTGCACCATGGGAATCATAATATCAAGAGCTTTTaGTCTGTCACCAGGGAGATTTCTCCTATTCAGTGCAAATGCATA +
Preference number: 5 (lower is better)
Translates to: LSFALHHGNHNIKSF*SVTREISPIQCKCI
Trigger: TATGCATTTGCACTGAATAGGAGAAATCTCCCTGGTGACAGAGCAAAAGCTCTTGATATTATGATTCCCATGGTGCAAAGCGAAGGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp GTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCCGGATTCAAATGCCTTTTaGAACCAAGAAGCTCCATGG +
Preference number: 5 (lower is better)
Translates to: VTFWFCSSGARSHEMLHPDSNAF*NQEAPW
Trigger: CCATGGAGCTTCTTGGTTCAAAAAGGCATTTGAATC...CGGATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp TGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTACATCTTTAATGGACCCCATTaGGAACGAAGGAGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: WSHFGFVPVVHDHMKCYIFNGPH*ERRRAE
Trigger: TTCTGCTCTCCTTCGTTCCAAATGGGGTCCATTAAA...GATGTAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTAGGAATTTCTATGGGTaGGGACTTAAGCTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCRNFYG*GLKLQV
Trigger: CACCTGAAGCTTAAGTCCCAACCCATAGAAATTCCT...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp GTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTATTCCTGACTGTAGTGTaGGCTCAGATTCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: VMVTFWFCSSGARSHEMLFLTVV*AQIQMP
Trigger: AGGCATTTGAATCTGAGCCAACACTACAGTCAGGAA...TAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTTAAACATTCCCACCTaGAACATAGCTGCTTGTGGT +
Preference number: 5 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCLNIPT*NIAACG
Trigger: ACCACAAGCAGCTATGTTCAAGGTGGGAATGTTTAA...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 90 bp TTTATGACAATATCTGCTGTCAAGACTTCGATATTATCTACTCGCTaGCGAATTCTTGCCAACTCAGCTGCCAATTCTTTACCAGTGTAT +
Preference number: 5 (lower is better)
Translates to: FMTISAVKTSILSTR*RILANSAANSLPVY
Trigger: ATACACTGGTAAAGAATTGGCAGCTGAGTTGGCAAGAATTCGGCAGCGAGTAGATAATATCGAAGTCTTGACAGCAGATATTGTCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CAGTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTGCCACCTTCAAAAGTaGAATAAAACGATCCACAAG +
Preference number: 5 (lower is better)
Translates to: QLWSHFGFVPVVHDHMKCCHLQK*NKTIHK
Trigger: CTTGTGGATCGTTTTATTCAACTTTTGAAGGTGGCA...ACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCAAATAGCAATTCTGACTaGGTTGCTCAAGTCCCGACC +
Preference number: 5 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSNSNSD*VAQVPT
Trigger: GGTCGGGACTTGAGCAACCAAGTCAGAATTGCTATT...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp TGGTACAGTTCAGTAGTACATAAACGACTCAAACAAATGTACGACAGGTCAGAATACATCCAAGTCTTCTaGATCAGCAGTATCACTCTC +
Preference number: 5 (lower is better)
Translates to: WYSSVVHKRLKQMYDRSEYIQVF*ISSITL
Trigger: GAGAGTGATACTGCTGATCAAGAAGACTTGGATGTA...TTCTGACCTGTCGTACATTTGTTTGAGTCGTTTATGTACTACTGAACTGTACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp GTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTAAGTTATGGTCACATTTaGGTTTTGTTCCAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: VMVTFWFCSSGARSHEMLSYGHI*VLFQWC
Trigger: GCACCACTGGAACAAAACCAAAATGTGACCATAACT...TAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCAGCTTTCCTGATGTCATaGAGTATAGATTCCCGGAAG +
Preference number: 5 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSAFLMS*SIDSRK
Trigger: CTTCCGGGAATCTATACTCAATGACATCAGGAAAGC...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCATTAGCACAGGCTCTCTaGTCAGGATCTGGTTCAAAA +
Preference number: 5 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSLAQAL*SGSGSK
Trigger: TTTTGAACCAGATCCTGACAAGAGAGCCTGTGCTAA...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp CTCAGATTATTAGAGCATATTACAAACACACAGAAGCCTAAACAGTTATGGTCATCTCACAATTTTGTCTaGGTCTTCCGTCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: LRLLEHITNTQKPKQLWSSHNFV*VFRQDP
Trigger: AGGATCCTGACGGAAGACCAAGACAAAATTGTGAGA...TGACCATAACTGTTTAGGCTTCTGTGTGTTTGTAATATGCTCTAATAATCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS TCA 90 bp TCGGTAAGTTCAGAATCTTCAGTATTTGTGCCAGAAGAATTTAGATaGAATACAGGCAATTCAGGAATTTCTATGGGTTGGGACTTAAGC +
Preference number: 5 (lower is better)
Translates to: SVSSESSVFVPEEFR*NTGNSGISMGWDLS
Trigger: GCTTAAGTCCCAACCCATAGAAATTCCTGAATTGCCTGTATTTCATCTAAATTCTTCTGGCACAAATACTGAAGATTCTGAACTTACCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS-3UTR CAA 90 bp GTTATGGTCACATTTTGGTTTTGTTCCAGTGGTGCACGATCACATGAAATGTTATTTATTGACAGCATCTaGAAAACCAAAGAGTACCAC +
Preference number: 5 (lower is better)
Translates to: VMVTFWFCSSGARSHEMLFIDSI*KTKEYH
Trigger: GTGGTACTCTTTGGTTTTCAAGATGCTGTCAATAAA...TAACATTTCATGTGATCGTGCACCACTGGAACAAAACCAAAATGTGACCATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp CCCAGCCGCACCGCCTGGCCAGCCACAGCTCGGGGCTaGTCCGCGCCCGCCGGGCTAAGCAGCTGCCATCGC +
Preference number: 6 (lower is better)
Translates to: PSRTAWPATARG*SAPAGLSSCHR
Trigger: GCGATGGCAGCTGCTTAGCCCGGCGGGCGCGGAGCAGCCCCGAGCTGTGGCTGGCCAGGCGGTGCGGCTGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CCA 72 bp AGCTGCCCCGGCCTCGGGTGGCACTGCTCGAGGAGGTaGCCGCCGGACAACCGATGCCAGGGGCAGCGGCGC +
Preference number: 6 (lower is better)
Translates to: SCPGLGWHCSRR*PPDNRCQGQRR
Trigger: GCGCCGCTGCCCCTGGCATCGGTTGTCCGGCGGCCACCTCCTCGAGCAGTGCCACCCGAGGCCGGGGCAGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp CCACCGTGGTCCGTCGGCTGCCCCCGCCAACAGAGCTaGCCCGGCCTCGGGTGGCACTGCTCGAGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: PPWSVGCPRQQS*PGLGWHCSRRW
Trigger: CCACCTCCTCGAGCAGTGCCACCCGAGGCCGGGGCAGCTCTGTTGGCGGGGGCAGCCGACGGACCACGGTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp CCCCGCCAACAGAGCTGCCCCGGCCTCGGGTGGCACTaGTCGAGGAGGTGGCCGCCGGACAACCGATGCCAG +
Preference number: 6 (lower is better)
Translates to: PRQQSCPGLGWH*SRRWPPDNRCQ
Trigger: CTGGCATCGGTTGTCCGGCGGCCACCTCCTCGAGCAGTGCCACCCGAGGCCGGGGCAGCTCTGTTGGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp TGGCACTGCTCGAGGAGGTGGCCGCCGGACAACCGATaGCAGGGGCAGCGGCGCTCTCCACGTTCCAGAAGC +
Preference number: 6 (lower is better)
Translates to: WHCSRRWPPDNR*QGQRRSPRSRS
Trigger: GCTTCTGGAACGTGGAGAGCGCCGCTGCCCCTGGCATCGGTTGTCCGGCGGCCACCTCCTCGAGCAGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 90 bp CGCCTCCCGCAAGCTCTGCAGGGCCTCGCTCTCGGCCACCACCAGTaGCCCTTGGCTCGCTTCGTTGATCACATATGCCACCGTGGTCCG +
Preference number: 6 (lower is better)
Translates to: RLPQALQGLALGHHQ*PLARFVDHICHRGP
Trigger: CGGACCACGGTGGCATATGTGATCAACGAAGCGAGCCAAGGGCAACTGGTGGTGGCCGAGAGCGAGGCCCTGCAGAGCTTGCGGGAGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS TCA 72 bp AGAAGCCCGAGGGGGCGAAGGGTGGCACAGAGAAAGTaGTGCCCTCGTCCGCCTCCGTGCTCATCTCTCCGG +
Preference number: 6 (lower is better)
Translates to: RSPRGRRVAQRK*CPRPPPCSSLR
Trigger: CCGGAGAGATGAGCACGGAGGCGGACGAGGGCATCACTTTCTCTGTGCCACCCTTCGCCCCCTCGGGCTTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CCA 72 bp GCCGCTCGCCCTCTGCAGAGTTTAGAGTACAAGGGGTaGGGAAGCCGGGTGAGCGGGAAGGGACGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: AARPLQSLEYKG*GSRVSGKGRSF
Trigger: GAAGCTCCGTCCCTTCCCGCTCACCCGGCTTCCCCACCCCTTGTACTCTAAACTCTGCAGAGGGCGAGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 90 bp CCGCAAGCTCTGCAGGGCCTCGCTCTCGGCCACCACCAGTTGCCCTaGGCTCGCTTCGTTGATCACATATGCCACCGTGGTCCGTCGGCT +
Preference number: 6 (lower is better)
Translates to: PQALQGLALGHHQLP*ARFVDHICHRGPSA
Trigger: AGCCGACGGACCACGGTGGCATATGTGATCAACGAAGCGAGCCAAGGGCAACTGGTGGTGGCCGAGAGCGAGGCCCTGCAGAGCTTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS TCA 72 bp TCTCGGCCACCACCAGTTGCCCTTGGCTCGCTTCGTTaGTCACATATGCCACCGTGGTCCGTCGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: SRPPPVALGSLR*SHMPPWSVGCP
Trigger: GGGGCAGCCGACGGACCACGGTGGCATATGTGATCAACGAAGCGAGCCAAGGGCAACTGGTGGTGGCCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 72 bp CTCTCGGCCACCACCAGTTGCCCTTGGCTCGCTTCGTaGATCACATATGCCACCGTGGTCCGTCGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: LSATTSCPWLAS*ITYATVVRRLP
Trigger: GGGCAGCCGACGGACCACGGTGGCATATGTGATCAACGAAGCGAGCCAAGGGCAACTGGTGGTGGCCGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp CACCAGTTGCCCTTGGCTCGCTTCGTTGATCACATATaGCACCGTGGTCCGTCGGCTGCCCCCGCCAACAGA +
Preference number: 6 (lower is better)
Translates to: HQLPLARFVDHI*HRGPSAAPANR
Trigger: TCTGTTGGCGGGGGCAGCCGACGGACCACGGTGGCATATGTGATCAACGAAGCGAGCCAAGGGCAACTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp TCAACTCCGTGTCGGGTGAAACTGAGCCGTACTCACTaGTGCTGCTGGTGTCCTCCACCAGCACAGGTACCG +
Preference number: 6 (lower is better)
Translates to: STPCRVKLSRTH*CCWCPPPAQVP
Trigger: CGGTACCTGTGCTGGTGGAGGACACCAGCAGCAGCAGTGAGTACGGCTCAGTTTCACCCGACACGGAGTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CCA 72 bp TGTCGGGTGAAACTGAGCCGTACTCACTGCTGCTGCTaGTGTCCTCCACCAGCACAGGTACCGGCAAGGATA +
Preference number: 6 (lower is better)
Translates to: CRVKLSRTHCCC*CPPPAQVPARI
Trigger: TATCCTTGCCGGTACCTGTGCTGGTGGAGGACACCAGCAGCAGCAGTGAGTACGGCTCAGTTTCACCCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp AGCACGGTGGTTTCTCCAAAGTCGAGTTTCCCAAAATaGAGGGTTTCCAGGGTGGCGCCCACTGTCTCGCAC +
Preference number: 6 (lower is better)
Translates to: STVVSPKSSFPK*RVSRVAPTVSH
Trigger: GTGCGAGACAGTGGGCGCCACCCTGGAAACCCTGCATTTTGGGAAACTCGACTTTGGAGAAACCACCGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CCA 72 bp TTTAGTTTCGGTTCTTCAGCCCCAGTTCCACGTGGCTaGGGAAGCCTCACAATCACGGCAGAAGGCAAGGAG +
Preference number: 6 (lower is better)
Translates to: FSFGSSAPVPRG*GSLTITAEGKE
Trigger: CTCCTTGCCTTCTGCCGTGATTGTGAGGCTTCCCCAGCCACGTGGAACTGGGGCTGAAGAACCGAAACTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463140.1
CDS TCA 72 bp CTCACAATTTTGTCTTGGTCTTCCGTCAGGATCCTGTaGAGGGTAGCTCGCCTCTCACTGTCCTTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: LTILSWSSVRIL*RVARLSLSFLS
Trigger: GCTGAGGAAGGACAGTGAGAGGCGAGCTACCCTTCACAGGATCCTGACGGAAGACCAAGACAAAATTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS TCA 72 bp ATCATGAGACACAGTAGAACTGAGCGTGCTCACGCCTaGGGTAGCCACAGCATCTTCAATGACAGCCTGAGG +
Preference number: 6 (lower is better)
Translates to: IMRHSRTERAHA*GSHSIFNDSLR
Trigger: CCTCAGGCTGTCATTGAAGATGCTGTGGCTACCTCAGGCGTGAGCACGCTCAGTTCTACTGTGTCTCATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp AAGCAGATGGGTCCAAGAAGCAGCTCGAAGTTCGGTTaGATGAGCTCTGTCAACCCCTTCATGAAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: KQMGPRSSSKFG*MSSVNPFMKLL
Trigger: CAGCAGCTTCATGAAGGGGTTGACAGAGCTCATGCAACCGAACTTCGAGCTGCTTCTTGGACCCATCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS TCA 72 bp GCCATGGCTGTCGAAGTCCAGCTCCAGTTTCAGCTTTaGCAGTGTGGTGGCTATGATTTTTCGGTCAGTGGA +
Preference number: 6 (lower is better)
Translates to: AMAVEVQLQFQL*QCGGYDFSVSG
Trigger: TCCACTGACCGAAAAATCATAGCCACCACACTGTCAAAGCTGAAACTGGAGCTGGACTTCGACAGCCATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359015.5
ENST00000463140.1
CDS CAA 72 bp GACAGCATCTTGAAAACCAAAGAGTACCACCTGGACTaGGCTAATGCCATGGCTGTCGAAGTCCAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: DSILKTKEYHLD*ANAMAVEVQLQ
Trigger: CTGGAGCTGGACTTCGACAGCCATGGCATTAGCCAAGTCCAGGTGGTACTCTTTGGTTTTCAAGATGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359015.5
ENST00000463140.1
CDS CCA 72 bp CCGCAATATCTGCATTGTAAAAGCGGTCCAGCACGGTaGTTTCTCCAAAGTCGAGTTTCCCAAAATGCAGGG +
Preference number: 6 (lower is better)
Translates to: PQYLHCKSGPAR*FLQSRVSQNAG
Trigger: CCCTGCATTTTGGGAAACTCGACTTTGGAGAAACCACCGTGCTGGACCGCTTTTACAATGCAGATATTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 72 bp CTCGACCAGGAAATCCATCCAAAAGTCCACAAGTTCTaGCTTGGCCACAGGCTGTTCTGTGGTCAGTTTCAC +
Preference number: 6 (lower is better)
Translates to: LDQEIHPKVHKF*LGHRLFCGQFH
Trigger: GTGAAACTGACCACAGAACAGCCTGTGGCCAAGCAAGAACTTGTGGACTTTTGGATGGATTTCCTGGTCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp TCGACCAGGAAATCCATCCAAAAGTCCACAAGTTCTTaGTTGGCCACAGGCTGTTCTGTGGTCAGTTTCACA +
Preference number: 6 (lower is better)
Translates to: STRKSIQKSTSS*LATGCSVVSFT
Trigger: TGTGAAACTGACCACAGAACAGCCTGTGGCCAAGCAAGAACTTGTGGACTTTTGGATGGATTTCCTGGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 72 bp GTCCGAATTCCCTTGACATCTCTTTCTCCGCAGGACTaGGCTCTTGTTTTGAAAGAGAAGGGGTCCACTTTC +
Preference number: 6 (lower is better)
Translates to: VRIPLTSLSPQD*ALVLKEKGSTF
Trigger: GAAAGTGGACCCCTTCTCTTTCAAAACAAGAGCCAAGTCCTGCGGAGAAAGAGATGTCAAGGGAATTCGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 90 bp CTTTGTGGCCTCGACCAGGAAATCCATCCAAAAGTCCACAAGTTCTaGCTTGGCCACAGGCTGTTCTGTGGTCAGTTTCACAAAATGCTT +
Preference number: 6 (lower is better)
Translates to: LCGLDQEIHPKVHKF*LGHRLFCGQFHKML
Trigger: AAGCATTTTGTGAAACTGACCACAGAACAGCCTGTGGCCAAGCAAGAACTTGTGGACTTTTGGATGGATTTCCTGGTCGAGGCCACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp TGGTTCAAAACATTTCAGTATGAATGCCTTGGCCTCTaGAGACATGGACTCTGGGATCTCAGGGTGGACTTT +
Preference number: 6 (lower is better)
Translates to: WFKTFQYECLGL*RHGLWDLRVDF
Trigger: AAAGTCCACCCTGAGATCCCAGAGTCCATGTCTGCAGAGGCCAAGGCATTCATACTGAAATGTTTTGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 90 bp AACTTTATTGACAGCATCTTGAAAACCAAAGAGTACCACCTGGACTaGGCTAATGCCATGGCTGTCGAAGTCCAGCTCCAGTTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: NFIDSILKTKEYHLD*ANAMAVEVQLQFQL
Trigger: AAGCTGAAACTGGAGCTGGACTTCGACAGCCATGGCATTAGCCAAGTCCAGGTGGTACTCTTTGGTTTTCAAGATGCTGTCAATAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359015.5
ENST00000463140.1
CDS CCA 72 bp CCAGGAAATCCATCCAAAAGTCCACAAGTTCTTGCTTaGCCACAGGCTGTTCTGTGGTCAGTTTCACAAAAT +
Preference number: 6 (lower is better)
Translates to: PGNPSKSPQVLA*PQAVLWSVSQN
Trigger: ATTTTGTGAAACTGACCACAGAACAGCCTGTGGCCAAGCAAGAACTTGTGGACTTTTGGATGGATTTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 72 bp ACCAGGAAATCCATCCAAAAGTCCACAAGTTCTTGCTaGGCCACAGGCTGTTCTGTGGTCAGTTTCACAAAA +
Preference number: 6 (lower is better)
Translates to: TRKSIQKSTSSC*ATGCSVVSFTK
Trigger: TTTTGTGAAACTGACCACAGAACAGCCTGTGGCCAAGCAAGAACTTGTGGACTTTTGGATGGATTTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp GCTTTGCACCATGGGAATCATAATATCAAGAGCTTTTaGTCTGTCACCAGGGAGATTTCTCCTATTCAGTGC +
Preference number: 6 (lower is better)
Translates to: ALHHGNHNIKSF*SVTREISPIQC
Trigger: GCACTGAATAGGAGAAATCTCCCTGGTGACAGAGCAAAAGCTCTTGATATTATGATTCCCATGGTGCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS TCA 72 bp TACTGGCTAGAACTTGCTTGTGCCACCTTCAAAAGTTaGATAAAACGATCCACAAGAGGTAAGCAGATGGGT +
Preference number: 6 (lower is better)
Translates to: YWLELACATFKS*IKRSTRGKQMG
Trigger: ACCCATCTGCTTACCTCTTGTGGATCGTTTTATTCAACTTTTGAAGGTGGCACAAGCAAGTTCTAGCCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 90 bp GCCAATTCTTTACCAGTGTATAAATTACGAGCTTTCCTGATGTCATaGAGTATAGATTCCCGGAAGTACTGGCTAGAACTTGCTTGTGCC +
Preference number: 6 (lower is better)
Translates to: ANSLPVYKLRAFLMS*SIDSRKYWLELACA
Trigger: GGCACAAGCAAGTTCTAGCCAGTACTTCCGGGAATCTATACTCAATGACATCAGGAAAGCTCGTAATTTATACACTGGTAAAGAATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp TATAGATTCCCGGAAGTACTGGCTAGAACTTGCTTGTaGCACCTTCAAAAGTTGAATAAAACGATCCACAAG +
Preference number: 6 (lower is better)
Translates to: YRFPEVLARTCL*HLQKLNKTIHK
Trigger: CTTGTGGATCGTTTTATTCAACTTTTGAAGGTGGCACAAGCAAGTTCTAGCCAGTACTTCCGGGAATCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp ATATCTGCTGTCAAGACTTCGATATTATCTACTCGCTaGCGAATTCTTGCCAACTCAGCTGCCAATTCTTTA +
Preference number: 6 (lower is better)
Translates to: ISAVKTSILSTR*RILANSAANSL
Trigger: TAAAGAATTGGCAGCTGAGTTGGCAAGAATTCGGCAGCGAGTAGATAATATCGAAGTCTTGACAGCAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp TCCGTAGCCTCTTGGTCCTTTATCTATTATTTCTGGTaGCATATACTGGAGGGTACCAGTAAAAGTTTCAGT +
Preference number: 6 (lower is better)
Translates to: SVASWSFIYYFW*HILEGTSKSFS
Trigger: ACTGAAACTTTTACTGGTACCCTCCAGTATATGGCACCAGAAATAATAGATAAAGGACCAAGAGGCTACGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 72 bp CCATCGAAGATTAGATTGAGCAACAGTCAAGTCTGTTaGTTTCGAAAGTCAATGATAGCCTTCCACAGTGTG +
Preference number: 6 (lower is better)
Translates to: PSKIRLSNSQVC*FRKSMIAFHSV
Trigger: CACACTGTGGAAGGCTATCATTGACTTTCGAAACAAACAGACTTGACTGTTGCTCAATCTAATCTTCGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 90 bp TATCTGCTGTCAAGACTTCGATATTATCTACTCGCTGCCGAATTCTaGCCAACTCAGCTGCCAATTCTTTACCAGTGTATAAATTACGAG +
Preference number: 6 (lower is better)
Translates to: YLLSRLRYYLLAAEF*PTQLPILYQCINYE
Trigger: CTCGTAATTTATACACTGGTAAAGAATTGGCAGCTGAGTTGGCAAGAATTCGGCAGCGAGTAGATAATATCGAAGTCTTGACAGCAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 90 bp TTAGAATTTCCATCGAAGATTAGATTGAGCAACAGTCAAGTCTGTTaGTTTCGAAAGTCAATGATAGCCTTCCACAGTGTGCACAGCATC +
Preference number: 6 (lower is better)
Translates to: LEFPSKIRLSNSQVC*FRKSMIAFHSVHSI
Trigger: GATGCTGTGCACACTGTGGAAGGCTATCATTGACTTTCGAAACAAACAGACTTGACTGTTGCTCAATCTAATCTTCGATGGAAATTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp AGGCAATACATATCTGAAGCAACTTGTCCTTCGCTTTaGACCATGGGAATCATAATATCAAGAGCTTTTGCT +
Preference number: 6 (lower is better)
Translates to: RQYISEATCPSL*TMGIIISRAFA
Trigger: AGCAAAAGCTCTTGATATTATGATTCCCATGGTGCAAAGCGAAGGACAAGTTGCTTCAGATATGTATTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS GCA 72 bp CACTCATGTATACCTTTCTTGTCATCAGGAAGCACGTaGCAAATAGAGATTGTCTTTTCCTCAACTTCATTG +
Preference number: 6 (lower is better)
Translates to: HSCIPFLSSGST*QIEIVFSSTSL
Trigger: CAATGAAGTTGAGGAAAAGACAATCTCTATTTGGCACGTGCTTCCTGATGACAAGAAAGGTATACATGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 72 bp TTACCAGTGTATAAATTACGAGCTTTCCTGATGTCATaGAGTATAGATTCCCGGAAGTACTGGCTAGAACTT +
Preference number: 6 (lower is better)
Translates to: LPVYKLRAFLMS*SIDSRKYWLEL
Trigger: AAGTTCTAGCCAGTACTTCCGGGAATCTATACTCAATGACATCAGGAAAGCTCGTAATTTATACACTGGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359015.5
CDS CAA 72 bp TTCTCACTGAAAGAGCCCAGATACTGGACAATATTTTaGTGCTTCAGGTGTTTATGCAATGCTATTTCTTCA +
Preference number: 6 (lower is better)
Translates to: FSLKEPRYWTIF*CFRCLCNAISS
Trigger: TGAAGAAATAGCATTGCATAAACACCTGAAGCACAAAAATATTGTCCAGTATCTGGGCTCTTTCAGTGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359015.5