RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP3K4 (Homo sapiens)

Ensembl gene IDs: ENSG00000085511

Ensembl transcript IDs: ENST00000348824.11, ENST00000366919.6, ENST00000366920.6, ENST00000392142.9, ENST00000446500.1, ENST00000448119.2, ENST00000490904.6, ENST00000536852.1, ENST00000539610.1, ENST00000540205.1, ENST00000542952.5, ENST00000543421.5, ENST00000544041.5

Found 1308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGATTTGGGCAGCACAGAGTCACCACCAGAGGGGCTGGGCCGACTaGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGC +
Preference number: 1 (lower is better)
Translates to: WIWAAQSHHQRGWAD*QQQQQQQQQQQQQG
Trigger: GCCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCCAGTCGGCCCAGCCCCTCTGGTGGTGACTCTGTGCTGCCCAAATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 90 bp CACGACTTTGACAGGCTGTGCCTCCCAGGTGCCCCAGCTGTCCTCTaGATCACGGGCTCGATCACCGTGCTTGGTCAGAAGCAGATAGGC +
Preference number: 1 (lower is better)
Translates to: HDFDRLCLPGAPAVL*ITGSITVLGQKQIG
Trigger: GCCTATCTGCTTCTGACCAAGCACGGTGATCGAGCCCGTGATTCAGAGGACAGCTGGGGCACCTGGGAGGCACAGCCTGTCAAAGTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 90 bp GCATGCTTCTCAGGGTGTCAACAGTCTCCACCTGAGGCACGACTTTaGCAGGCTGTGCCTCCCAGGTGCCCCAGCTGTCCTCTGAATCAC +
Preference number: 1 (lower is better)
Translates to: ACFSGCQQSPPEARL*QAVPPRCPSCPLNH
Trigger: GTGATTCAGAGGACAGCTGGGGCACCTGGGAGGCACAGCCTGTCAAAGTCGTGCCTCAGGTGGAGACTGTTGACACCCTGAGAAGCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 90 bp AGATTATCCACCTGCATGCTTCTCAGGGTGTCAACAGTCTCCACCTaGGGCACGACTTTGACAGGCTGTGCCTCCCAGGTGCCCCAGCTG +
Preference number: 1 (lower is better)
Translates to: RLSTCMLLRVSTVST*GTTLTGCASQVPQL
Trigger: CAGCTGGGGCACCTGGGAGGCACAGCCTGTCAAAGTCGTGCCTCAGGTGGAGACTGTTGACACCCTGAGAAGCATGCAGGTGGATAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 90 bp TGTTGCAGTCGGGCTTCTCCAAGTCCTCCAGAACCTCCTGCAGCATaGACTGGTAGTACTGCTTCATCAGCAGGCCGCCCTTCAGGACCT +
Preference number: 1 (lower is better)
Translates to: CCSRASPSPPEPPAA*TGSTASSAGRPSGP
Trigger: AGGTCCTGAAGGGCGGCCTGCTGATGAAGCAGTACTACCAGTTCATGCTGCAGGAGGTTCTGGAGGACTTGGAGAAGCCCGACTGCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR GCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTaGCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTC +
Preference number: 1 (lower is better)
Translates to: AASLTSWPPALQRAF*HIRQTGAAGEVTLV
Trigger: GACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR CCA 90 bp TCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATaGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCATGTAT +
Preference number: 1 (lower is better)
Translates to: SMTTHPRLQMSAARP*PSPLARVMTSGAMY
Trigger: ATACATGGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR TCA 90 bp CCTCTTGGATATGCTGGTTCATCTCGCTCCTCCGTGGGGCTTGAGTaGCGACTCAGGGACCTAAACTGCAATTCAGCAGCTATGGAAGCC +
Preference number: 1 (lower is better)
Translates to: PLGYAGSSRSSVGLE*RLRDLNCNSAAMEA
Trigger: GGCTTCCATAGCTGCTGAATTGCAGTTTAGGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAGCGAGATGAACCAGCATATCCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CCA 90 bp CATGCTCCGAGTGCTGAATCCCTCTGGAGTGGGGATAATGAGGTGTaGGTTAGGAGGGTCACTATGGCATCGAGGTACCTTCATAGGACG +
Preference number: 1 (lower is better)
Translates to: HAPSAESLWSGDNEV*VRRVTMASRYLHRT
Trigger: CGTCCTATGAAGGTACCTCGATGCCATAGTGACCCTCCTAACCCACACCTCATTATCCCCACTCCAGAGGGATTCAGCACTCGGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CCA 90 bp GACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTaGGTCACTCTCAAGGCAGTGAGAAAGGAAGTCCTTTCCTTCAGG +
Preference number: 1 (lower is better)
Translates to: DKRMVEELAGGPSHL*VTLKAVRKEVLSFR
Trigger: CCTGAAGGAAAGGACTTCCTTTCTCACTGCCTTGAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR TCA 90 bp ATCTCCTCTTGGATATGCTGGTTCATCTCGCTCCTCCGTGGGGCTTaGGTGACGACTCAGGGACCTAAACTGCAATTCAGCAGCTATGGA +
Preference number: 1 (lower is better)
Translates to: ISSWICWFISLLRGA*VTTQGPKLQFSSYG
Trigger: TCCATAGCTGCTGAATTGCAGTTTAGGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAGCGAGATGAACCAGCATATCCAAGAGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 90 bp CACGGGCTCGATCACCGTGCTTGGTCAGAAGCAGATAGGCATCGATaGGTACGTCATCTGAATCTTTTGAACAGTCCTTTCCTGCAGCTG +
Preference number: 1 (lower is better)
Translates to: HGLDHRAWSEADRHR*VRHLNLLNSPFLQL
Trigger: CAGCTGCAGGAAAGGACTGTTCAAAAGATTCAGATGACGTACTCATCGATGCCTATCTGCTTCTGACCAAGCACGGTGATCGAGCCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 90 bp AATGCATCATTCTTCAGCTGCTGCAAAGCTTTGGCGATGACCGGCTaGCTGGATGTCTGCTCCTGGCACAGAGTCATAAGTCCCTCAATG +
Preference number: 1 (lower is better)
Translates to: NASFFSCCKALAMTG*LDVCSWHRVISPSM
Trigger: CATTGAGGGACTTATGACTCTGTGCCAGGAGCAGACATCCAGTCAGCCGGTCATCGCCAAAGCTTTGCAGCAGCTGAAGAATGATGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 90 bp GAAATCGAATCTCTTTCATGGCCATCAGCTCCCCGGTGTCGACGCTaGTGCAGGTGTACACCTTCCCATACTGGCCTTCTCCAATTTTGT +
Preference number: 1 (lower is better)
Translates to: EIESLSWPSAPRCRR*CRCTPSHTGLLQFC
Trigger: ACAAAATTGGAGAAGGCCAGTATGGGAAGGTGTACACCTGCATCAGCGTCGACACCGGGGAGCTGATGGCCATGAAAGAGATTCGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 90 bp AGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCAAGGCAGTaGGAAAGGAAGTCCTTTCCTTCAGGGCTTAATCTTTCAGGGATT +
Preference number: 1 (lower is better)
Translates to: SWLAVHLIFGSLSRQ*ERKSFPSGLNLSGI
Trigger: AATCCCTGAAAGATTAAGCCCTGAAGGAAAGGACTTCCTTTCTCACTGCCTTGAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR TCA 90 bp AACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTaGTGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGG +
Preference number: 1 (lower is better)
Translates to: NTTTSFEPRKVKTLR*CHGSQSRETRRRQR
Trigger: CCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR TCA 90 bp CTCCAGCAGGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATaGCATTCAGAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGA +
Preference number: 1 (lower is better)
Translates to: LQQVSAPILTSDTHV*HSEGLGRELGRQVR
Trigger: TCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
3UTR TCA 90 bp ATCGCAATGGTGATCTGCTTTGAATACAGCCTAATCACATGTTCCTaGAGTCCCAGCCTTGACACCTCTTCTAAAGTCCCCTCATCGCAG +
Preference number: 1 (lower is better)
Translates to: IAMVICFEYSLITCS*SPSLDTSSKVPSSQ
Trigger: CTGCGATGAGGGGACTTTAGAAGAGGTGTCAAGGCTGGGACTTCAGGAACATGTGATTAGGCTGTATTCAAAGCAGATCACCATTGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR TCA 90 bp TCAGGGATTGGTGGCTTATGTCCCATCCCCACTTTATACATAATTTaGAAGTTGTGCTCATACTCATGCCAAGGCCTCTTGCCAGTCACC +
Preference number: 1 (lower is better)
Translates to: SGIGGLCPIPTLYII*KLCSYSCQGLLPVT
Trigger: GGTGACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGACATAAGCCACCAATCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR GCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTaGAGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCT +
Preference number: 1 (lower is better)
Translates to: HQTNRSSRRSDACHL*SLQSWKVKKAYTAS
Trigger: AGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR CCA 90 bp ATTTTAGCAAATCCAAGTGCTTTGGAAGCCCTTTCTCTGGCTTCATaGAAGAGCTCCTTCAGGGCTCGACTGATCTCTATAACAGACCTC +
Preference number: 1 (lower is better)
Translates to: ILANPSALEALSLAS*KSSFRARLISITDL
Trigger: GAGGTCTGTTATAGAGATCAGTCGAGCCCTGAAGGAGCTCTTCCATGAAGCCAGAGAAAGGGCTTCCAAAGCACTTGGATTTGCTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CCA 90 bp GATTCAGATTCATCAACCTCAGCATCAAATTCTGATGTGAACATGTaGTCCACGCGGTCAATGGCATTGCTTATCCTGTTGCATAGCTCC +
Preference number: 1 (lower is better)
Translates to: DSDSSTSASNSDVNM*STRSMALLILLHSS
Trigger: GGAGCTATGCAACAGGATAAGCAATGCCATTGACCGCGTGGACCACATGTTCACATCAGAATTTGATGCTGAGGTTGATGAATCTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CCA 90 bp GCTGTTCCGATGAATGGCAAGGTACAAACCTGTAACAGGACTGTGTaGTTTTCCTATGACATGGCCAATGCATTCATTCATCAAGGCTTG +
Preference number: 1 (lower is better)
Translates to: AVPMNGKVQTCNRTV*FSYDMANAFIHQGL
Trigger: CAAGCCTTGATGAATGAATGCATTGGCCATGTCATAGGAAAACCACACAGTCCTGTTACAGGTTTGTACCTTGCCATTCATCGGAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 90 bp TTGCAAGGTGACAGATTCAGATTCATCAACCTCAGCATCAAATTCTaGTGTGAACATGTGGTCCACGCGGTCAATGGCATTGCTTATCCT +
Preference number: 1 (lower is better)
Translates to: LQGDRFRFINLSIKF*CEHVVHAVNGIAYP
Trigger: AGGATAAGCAATGCCATTGACCGCGTGGACCACATGTTCACATCAGAATTTGATGCTGAGGTTGATGAATCTGAATCTGTCACCTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR GCA 90 bp ACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTaGTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGG +
Preference number: 1 (lower is better)
Translates to: TSCLILKRDGSPAGL*SNLNFRHSCMTFRR
Trigger: CCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
3UTR CCA 90 bp GCAAGGTACAAACCTGTAACAGGACTGTGTGGTTTTCCTATGACATaGCCAATGCATTCATTCATCAAGGCTTGTAAACTCAAGAAGTCA +
Preference number: 1 (lower is better)
Translates to: ARYKPVTGLCGFPMT*PMHSFIKACKLKKS
Trigger: TGACTTCTTGAGTTTACAAGCCTTGATGAATGAATGCATTGGCCATGTCATAGGAAAACCACACAGTCCTGTTACAGGTTTGTACCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CCA 90 bp CTCATTTCTCGGTACCTCTTTTCTTCAAACAATCGGACTGACTTCTaGATAGCTTCTATGGGTCCTAGTTTAGAAGCAGTATCTTTACTC +
Preference number: 1 (lower is better)
Translates to: LISRYLFSSNNRTDF*IASMGPSLEAVSLL
Trigger: GAGTAAAGATACTGCTTCTAAACTAGGACCCATAGAAGCTATCCAGAAGTCAGTCCGATTGTTTGAAGAAAAGAGGTACCGAGAAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR GCA 90 bp AACTTCTTTATGATACTCAAATCCAAAATTGTACCCCTGAATCATTaGTTCTCGGTAGTACTGTTGCAAGGTGACAGATTCAGATTCATC +
Preference number: 1 (lower is better)
Translates to: NFFMILKSKIVPLNH*FSVVLLQGDRFRFI
Trigger: GATGAATCTGAATCTGTCACCTTGCAACAGTACTACCGAGAAGCAATGATTCAGGGGTACAATTTTGGATTTGAGTATCATAAAGAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR GCA 90 bp AACCAGATTGGGGTGTTTGATGCCTTCGAATATTTTCAATTCGTCTaGAGTTTCCTTGATAGTCTTATGGTCATTAGGTTGAAATCGAAT +
Preference number: 1 (lower is better)
Translates to: NQIGVFDAFEYFQFV*SFLDSLMVIRLKSN
Trigger: ATTCGATTTCAACCTAATGACCATAAGACTATCAAGGAAACTGCAGACGAATTGAAAATATTCGAAGGCATCAAACACCCCAATCTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CAA 90 bp CACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTaGGCACGAGTGATGACTTCAGGTGCCATGTATGCTGCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: HPRLQMSAARPWPSP*ARVMTSGAMYAAVP
Trigger: GGGGACAGCAGCATACATGGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR CAA 90 bp TCAGGAACGCTGGAACCCCTGGTATCATGGGCACTGCTGATGGATTaGGGCAGCACAGAGTCACCACCAGAGGGGCTGGGCCGACTGGCA +
Preference number: 2 (lower is better)
Translates to: SGTLEPLVSWALLMD*GSTESPPEGLGRLA
Trigger: TGCCAGTCGGCCCAGCCCCTCTGGTGGTGACTCTGTGCTGCCCAAATCCATCAGCAGTGCCCATGATACCAGGGGTTCCAGCGTTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR CCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGATCGGCCGCACGCCCATaGCCCTCTCCTTTGGCACGA +
Preference number: 2 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRSAARP*PSPLAR
Trigger: TCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR TCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCGAGCAGCAGGAGAAGTaGCGCTTGTCACCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: AASLTSWPPALQRAFCHIEQQEK*RLSPVQ
Trigger: CTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTC...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CCA 90 bp ACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACCTTTAATGTCACGGTaGACTATGCCATGCTCATGG +
Preference number: 2 (lower is better)
Translates to: THPRLQMSAARPWPSPLAPLMSR*TMPCSW
Trigger: CCATGAGCATGGCATAGTCCACCGTGACATTAAAGG...TGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR GCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCTCCAGAGGGCCTTTTaGCACATCAGACAAACAGGA +
Preference number: 2 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGLQRAF*HIRQTG
Trigger: TCCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAG...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR TCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTGAGCAGCAGGAGAAGTaGCGCTTGTCACCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSEQQEK*RLSPVQ
Trigger: CTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTC...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR GCA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGACGCTTGTCACCTGTaGAGTCTTCAGTCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: NTTLMSRFSVARDTEETEDACHL*SLQSWK
Trigger: CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTC...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR GCA 90 bp CAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTTCAGGTGCCATGTATaGTGCTGTCCCCAGGGTGCT +
Preference number: 2 (lower is better)
Translates to: QGLLPVTISMTTHPRLQMFRCHV*CCPQGA
Trigger: AGCACCCTGGGGACAGCAGCATACATGGCACCTGAA...CATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CCA 90 bp CATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCTCACCAGGCATGGTCTaGGCATTGTTTTTGAGCTTT +
Preference number: 2 (lower is better)
Translates to: HLYDNTPQTPDVGRTPMASPGMV*ALFLSF
Trigger: AAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA...GGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR TCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGGAGCAGCAGGAGAAGTaGCGCTTGTCACCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: LNLERSKHYADVTVLSRAEQQEK*RLSPVQ
Trigger: CTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTC...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR TCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGGTCAAAACACTACGCTaGTGTCACGGTTCTCAGTCG +
Preference number: 2 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRVKTLR*CHGSQS
Trigger: CGACTGAGAACCGTGACATCAGCGTAGTGTTTTGAC...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR TCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTCAGACACTCATGTATaGCATTCAGAAGGACTCGGC +
Preference number: 2 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQSDTHV*HSEGLG
Trigger: GCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR GCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAGACGCTTGTCACCTGTaGAGTCTTCAGTCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTDACHL*SLQSWK
Trigger: CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTC...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR GCA 90 bp CCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCATGTATGCTGCTCTCCAGAGGGCCTTTTaGCACATCAGACAAACAGGA +
Preference number: 2 (lower is better)
Translates to: PWPSPLARVMTSGAMYAALQRAF*HIRQTG
Trigger: TCCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAG...AGCAGCATACATGGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR GCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTCCAGAGGGCCTTTTaGCACATCAGACAAACAGGA +
Preference number: 2 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSLQRAF*HIRQTG
Trigger: TCCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAG...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CCA 90 bp GCAAACCTTGACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTGAACCCCTGGTATCATaGGCACTGCTGATGGATTTG +
Preference number: 2 (lower is better)
Translates to: ANLDKRMVEELAGGPSHLEPLVS*ALLMDL
Trigger: CAAATCCATCAGCAGTGCCCATGATACCAGGGGTTC...AAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR CCA 90 bp GCAAACCTTGACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTCTTTCAGGGATTGGTaGCTTATGTCCCATCCCCAC +
Preference number: 2 (lower is better)
Translates to: ANLDKRMVEELAGGPSHLSFRDW*LMSHPH
Trigger: GTGGGGATGGGACATAAGCCACCAATCCCTGAAAGA...AAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR TCA 90 bp ATACTCATGCCAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGCTAATCACATGTTCCTaGAGTCCCAGCCTTGACACC +
Preference number: 2 (lower is better)
Translates to: ILMPRPLASHHLYDNTPQLITCS*SPSLDT
Trigger: GGTGTCAAGGCTGGGACTTCAGGAACATGTGATTAG...CTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTGGCATGAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR GCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACGACGCTTGTCACCTGTaGAGTCTTCAGTCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNDACHL*SLQSWK
Trigger: CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTC...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR GCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGACGCTTGTCACCTGTaGAGTCTTCAGTCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: LERSKHYADVTVLSRARHDACHL*SLQSWK
Trigger: CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTC...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR GCA 90 bp AAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCTCTCCAGCAGGTCTCTaGTCCAATCTTAACTTCAGA +
Preference number: 2 (lower is better)
Translates to: KRMVEELAGGPSHLWVTLSPAGL*SNLNFR
Trigger: TCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGA...GAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR GCA 90 bp CATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCTCTAACCCAGGAATTTaGACCTTGACATACTGTTTT +
Preference number: 2 (lower is better)
Translates to: HLYDNTPQTPDVGRTPMASNPGI*TLTYCF
Trigger: AAAACAGTATGTCAAGGTGCAAATTCCTGGGTTAGA...GGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR TCA 90 bp GCAAACCTTGACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGAAAGCTTTTCTCTaGATTGTGAGATGCGCAGAC +
Preference number: 2 (lower is better)
Translates to: ANLDKRMVEELAGGPSHLWKAFL*IVRCAD
Trigger: GTCTGCGCATCTCACAATTCAGAGAAAAGCTTTCCA...AAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR GCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGGACGCTTGTCACCTGTaGAGTCTTCAGTCTTGGAAG +
Preference number: 2 (lower is better)
Translates to: LNLERSKHYADVTVLSRADACHL*SLQSWK
Trigger: CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTC...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR GCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGATTTGCATTACAAACCTaGAGCTTGCCAACAACAACA +
Preference number: 2 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRFALQT*SLPTTT
Trigger: TGTTGTTGTTGGCAAGCTGCAGGTTTGTAATGCAAA...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
3UTR-3UTR TCA 90 bp GATGCCTTCGAATATTTTCAATTCGTCTGCAGTTTCCTTGATAGTCTTATGGTCCCCCGGTGTCGACGCTaGTGCAGGTGTACACCTTCC +
Preference number: 2 (lower is better)
Translates to: DAFEYFQFVCSFLDSLMVPRCRR*CRCTPS
Trigger: GGAAGGTGTACACCTGCATCAGCGTCGACACCGGGG...GACCATAAGACTATCAAGGAAACTGCAGACGAATTGAAAATATTCGAAGGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR GCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTAGGTTTCACAGTCAGTaGACTCAACAAACAGGAGAT +
Preference number: 2 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSRFHSQ*TQQTGD
Trigger: ATCTCCTGTTTGTTGAGTGCACTGACTGTGAAACCT...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACAATACTCAAGAGAGATaGTTCTCCAGCAGGTCTCTG +
Preference number: 2 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNNTQER*FSSRSL
Trigger: CAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATT...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CAA 90 bp GATGTGAACATGTGGTCCACGCGGTCAATGGCATTGCTTATCCTGTaGCATAGCTCCAATGCATCATTCTTCAGCTGCTGCAAAGCTTTG +
Preference number: 2 (lower is better)
Translates to: DVNMWSTRSMALLIL*HSSNASFFSCCKAL
Trigger: CAAAGCTTTGCAGCAGCTGAAGAATGATGCATTGGAGCTATGCAACAGGATAAGCAATGCCATTGACCGCGTGGACCACATGTTCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR GCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTTTTGCATTACAAACCTaGAGCTTGCCAACAACAACA +
Preference number: 2 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSFALQT*SLPTTT
Trigger: TGTTGTTGTTGGCAAGCTGCAGGTTTGTAATGCAAA...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
3UTR CAA 90 bp TACACCATAAGCATTTTATGTAGATCCTCTTCAAAAGCGTCAATGTaGCAGTCGGGCTTCTCCAAGTCCTCCAGAACCTCCTGCAGCATG +
Preference number: 2 (lower is better)
Translates to: YTISILCRSSSKASM*QSGFSKSSRTSCSM
Trigger: CATGCTGCAGGAGGTTCTGGAGGACTTGGAGAAGCCCGACTGCAACATTGACGCTTTTGAAGAGGATCTACATAAAATGCTTATGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CAA 90 bp GCATCAAATTCTGATGTGAACATGTGGTCCACGCGGTCAATGGCATaGCTTATCCTGTTGCATAGCTCCAATGCATCATTCTTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: ASNSDVNMWSTRSMA*LILLHSSNASFFSC
Trigger: GCAGCTGAAGAATGATGCATTGGAGCTATGCAACAGGATAAGCAATGCCATTGACCGCGTGGACCACATGTTCACATCAGAATTTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CAA 90 bp GCACCTTTAATGTCACGGTGGACTATGCCATGCTCATGGAGGACGTaGATCGCAATGGTGATCTGCTTTGAATACAGCCTAATCACATGT +
Preference number: 2 (lower is better)
Translates to: APLMSRWTMPCSWRT*IAMVICFEYSLITC
Trigger: ACATGTGATTAGGCTGTATTCAAAGCAGATCACCATTGCGATCAACGTCCTCCATGAGCATGGCATAGTCCACCGTGACATTAAAGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR CAA 90 bp CCCAGGGTGCTGTTCACTTCACCAGGCATGGTCTGGGCATTGTTTTaGAGCTTTACTGAACATCCAAAATCTCCCAGTTTGATTAATCCA +
Preference number: 2 (lower is better)
Translates to: PRVLFTSPGMVWALF*SFTEHPKSPSLINP
Trigger: TGGATTAATCAAACTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGAAGTGAACAGCACCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR CAA 90 bp TTCAGGGATTGGTGGCTTATGTCCCATCCCCACTTTATACATAATTaGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTGCCAGTCAC +
Preference number: 2 (lower is better)
Translates to: FRDWWLMSHPHFIHN*KVVLILMPRPLASH
Trigger: GTGACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGACATAAGCCACCAATCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR TCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCGAGCAGCAGGAGAAGTaGCGCTTGTCACCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: ITLQLLLNLERSKHYADVEQQEK*RLSPVQ
Trigger: CTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTC...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CCA 90 bp TCAAACAATCGGACTGACTTCTGGATAGCTTCTATGGGTCCTAGTTTAGAAGCATCTGATGTGAACATGTaGTCCACGCGGTCAATGGCA +
Preference number: 2 (lower is better)
Translates to: SNNRTDFWIASMGPSLEASDVNM*STRSMA
Trigger: TGCCATTGACCGCGTGGACCACATGTTCACATCAGA...TGCTTCTAAACTAGGACCCATAGAAGCTATCCAGAAGTCAGTCCGATTGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR TCA 90 bp CCTCAGCAAGAGTGTCTGGAACAAACATTTGCAAGTTTTCTAACCCAGGAATTTCTGGGGCTGAAAGCCTaGATTCTGCTGCTATTTCCA +
Preference number: 2 (lower is better)
Translates to: PQQECLEQTFASFLTQEFLGLKA*ILLLFP
Trigger: TGGAAATAGCAGCAGAATTCAGGCTTTCAGCCCCAG...AAATTCCTGGGTTAGAAAACTTGCAAATGTTTGTTCCAGACACTCTTGCTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR GCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCCAGAGGGCCTTTTaGCACATCAGACAAACAGGA +
Preference number: 2 (lower is better)
Translates to: LQLLLNLERSKHYADVTVLQRAF*HIRQTG
Trigger: TCCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAG...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTGCAGTCTTCAGTCTTaGAAGGTTAAAAAGGCTTAT +
Preference number: 2 (lower is better)
Translates to: LNLERSKHYADVTVLSRACSLQS*KVKKAY
Trigger: ATAAGCCTTTTTAACCTTCCAAGACTGAAGACTGCA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR TCA 90 bp ATTTCTCGGTACCTCTTTTCTTCAAACAATCGGACTGACTTCTGGATAGCTTCTCATCAAATTCTGATGTaGACATGTGGTCCACGCGGT +
Preference number: 2 (lower is better)
Translates to: ISRYLFSSNNRTDFWIASHQILM*TCGPRG
Trigger: ACCGCGTGGACCACATGTTCACATCAGAATTTGATG...AGAAGCTATCCAGAAGTCAGTCCGATTGTTTGAAGAAAAGAGGTACCGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR CCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTAGGAGACAGAGGCGATaGTCCGTGTACAGTAGTAAT +
Preference number: 2 (lower is better)
Translates to: LQLLLNLERSKHYADVTVRRQRR*SVYSSN
Trigger: ATTACTACTGTACACGGACCATCGCCTCTGTCTCCT...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR GCA 90 bp TCAAACAATCGGACTGACTTCTGGATAGCTTCTATGGGTCCTAGTTTAGAAGCAAAGCCTGAATTCTGCTaGTATTTCCAGGTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: SNNRTDFWIASMGPSLEAKPEFC*YFQVLS
Trigger: AGAAAGGACCTGGAAATAGCAGCAGAATTCAGGCTT...TGCTTCTAAACTAGGACCCATAGAAGCTATCCAGAAGTCAGTCCGATTGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CAA 90 bp AGTACGTCATCTGAATCTTTTGAACAGTCCTTTCCTGCAGCTGCATaGAGTAACTGCAAAATAATACTCTTCTCCTCAGCAAGAGTGTCT +
Preference number: 2 (lower is better)
Translates to: STSSESFEQSFPAAA*SNCKIILFSSARVS
Trigger: AGACACTCTTGCTGAGGAGAAGAGTATTATTTTGCAGTTACTCAATGCAGCTGCAGGAAAGGACTGTTCAAAAGATTCAGATGACGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR TCA 90 bp AACGTGCATAACATTATCATAGGACTTAGGCGTATCACAAACTTGACCAATGATTCTTGTGGACCCACTTaGATCTCCTCTTGGATATGC +
Preference number: 2 (lower is better)
Translates to: NVHNIIIGLRRITNLTNDSCGPT*ISSWIC
Trigger: GCATATCCAAGAGGAGATTCAAGTGGGTCCACAAGA...ATCATTGGTCAAGTTTGTGATACGCCTAAGTCCTATGATAATGTTATGCACGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CAA 90 bp AAATCCAAAATTGTACCCCTGAATCATTGCTTCTCGGTAGTACTGTaGCAAGGTGACAGATTCAGATTCATCAACCTCAGCATCAAATTC +
Preference number: 2 (lower is better)
Translates to: KSKIVPLNHCFSVVL*QGDRFRFINLSIKF
Trigger: GAATTTGATGCTGAGGTTGATGAATCTGAATCTGTCACCTTGCAACAGTACTACCGAGAAGCAATGATTCAGGGGTACAATTTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR GCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATAGGTTTCACAGTCAGTaGACTCAACAAACAGGAGAT +
Preference number: 2 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYRFHSQ*TQQTGD
Trigger: ATCTCCTGTTTGTTGAGTGCACTGACTGTGAAACCT...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR CAA 90 bp TGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTCCCAGTTaGATTAATCCAGATGAGGTAAGGAAGATATTGGCACCTTTAATG +
Preference number: 2 (lower is better)
Translates to: WALFLSFTEHPKSPS*INPDEVRKILAPLM
Trigger: CATTAAAGGTGCCAATATCTTCCTTACCTCATCTGGATTAATCAAACTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CCA 90 bp TTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTGCCAGTTGCAGTCTTCAGTCTTaGAAGGTTAAAAAGGCTTAT +
Preference number: 2 (lower is better)
Translates to: FIHNLKVVLILMPRPLASCSLQS*KVKKAY
Trigger: ATAAGCCTTTTTAACCTTCCAAGACTGAAGACTGCA...ACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCTGCAGTCTTCAGTCTTaGAAGGTTAAAAAGGCTTAT +
Preference number: 2 (lower is better)
Translates to: ITLQLLLNLERSKHYADVCSLQS*KVKKAY
Trigger: ATAAGCCTTTTTAACCTTCCAAGACTGAAGACTGCA...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTGCAGTCTTCAGTCTTaGAAGGTTAAAAAGGCTTAT +
Preference number: 2 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSCSLQS*KVKKAY
Trigger: ATAAGCCTTTTTAACCTTCCAAGACTGAAGACTGCA...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
3UTR CCA 72 bp GCAGCACAGAGTCACCACCAGAGGGGCTGGGCCGACTaGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: AAQSHHQRGWAD*QQQQQQQQQQQ
Trigger: CTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCCAGTCGGCCCAGCCCCTCTGGTGGTGACTCTGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CCA 72 bp TGGATTTGGGCAGCACAGAGTCACCACCAGAGGGGCTaGGCCGACTGGCAGCAACAGCAGCAGCAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: WIWAAQSHHQRG*ADWQQQQQQQQ
Trigger: CTGCTGCTGCTGCTGCTGTTGCTGCCAGTCGGCCCAGCCCCTCTGGTGGTGACTCTGTGCTGCCCAAATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 72 bp TCAGGGTGTCAACAGTCTCCACCTGAGGCACGACTTTaGCAGGCTGTGCCTCCCAGGTGCCCCAGCTGTCCT +
Preference number: 3 (lower is better)
Translates to: SGCQQSPPEARL*QAVPPRCPSCP
Trigger: AGGACAGCTGGGGCACCTGGGAGGCACAGCCTGTCAAAGTCGTGCCTCAGGTGGAGACTGTTGACACCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CCA 72 bp ACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATaGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGT +
Preference number: 3 (lower is better)
Translates to: THPRLQMSAARP*PSPLARVMTSG
Trigger: ACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR TCA 72 bp ACCTGCATGCTTCTCAGGGTGTCAACAGTCTCCACCTaGGGCACGACTTTGACAGGCTGTGCCTCCCAGGTG +
Preference number: 3 (lower is better)
Translates to: TCMLLRVSTVST*GTTLTGCASQV
Trigger: CACCTGGGAGGCACAGCCTGTCAAAGTCGTGCCTCAGGTGGAGACTGTTGACACCCTGAGAAGCATGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR CAA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGCCTCCAGAGGGCCTTTaGCCACATCAGACAAACAGG +
Preference number: 3 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQPPEGL*PHQTNR
Trigger: CCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGG...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CAA 90 bp ACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCAGGCATGGTCTGGGCATaGTTTTTGAGCTTTACTGAA +
Preference number: 3 (lower is better)
Translates to: THPRLQMSAARPWPSPLAGMVWA*FLSFTE
Trigger: TTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCC...TGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR TCA 72 bp TCTCTTTCATGGCCATCAGCTCCCCGGTGTCGACGCTaGTGCAGGTGTACACCTTCCCATACTGGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: SLSWPSAPRCRR*CRCTPSHTGLL
Trigger: GAGAAGGCCAGTATGGGAAGGTGTACACCTGCATCAGCGTCGACACCGGGGAGCTGATGGCCATGAAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 72 bp ACTCATGCCAAGGCCTCTTGCCAGTCACCATCTCTATaGCAACACACCCCAGACTCCAGATGTCGGCCGCAC +
Preference number: 3 (lower is better)
Translates to: THAKASCQSPSL*QHTPDSRCRPH
Trigger: GTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTGGCATGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR GCA 72 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTaGCACATCAGACAAACAGGAGCAGCAGGAGAAGTG +
Preference number: 3 (lower is better)
Translates to: LTSWPPALQRAF*HIRQTGAAGEV
Trigger: CACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR CCA 72 bp GTGGGGATAATGAGGTGTGGGTTAGGAGGGTCACTATaGCATCGAGGTACCTTCATAGGACGGGGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: VGIMRCGLGGSL*HRGTFIGRGLF
Trigger: GAACAGCCCCCGTCCTATGAAGGTACCTCGATGCCATAGTGACCCTCCTAACCCACACCTCATTATCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 72 bp ATGCATCATTCTTCAGCTGCTGCAAAGCTTTGGCGATaGCCGGCTGACTGGATGTCTGCTCCTGGCACAGAG +
Preference number: 3 (lower is better)
Translates to: MHHSSAAAKLWR*PADWMSAPGTE
Trigger: CTCTGTGCCAGGAGCAGACATCCAGTCAGCCGGTCATCGCCAAAGCTTTGCAGCAGCTGAAGAATGATGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 72 bp TATGCTGGTTCATCTCGCTCCTCCGTGGGGCTTGAGTaGCGACTCAGGGACCTAAACTGCAATTCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: YAGSSRSSVGLE*RLRDLNCNSAA
Trigger: AGCTGCTGAATTGCAGTTTAGGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAGCGAGATGAACCAGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 72 bp TGGATATGCTGGTTCATCTCGCTCCTCCGTGGGGCTTaGGTGACGACTCAGGGACCTAAACTGCAATTCAGC +
Preference number: 3 (lower is better)
Translates to: WICWFISLLRGA*VTTQGPKLQFS
Trigger: GCTGAATTGCAGTTTAGGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAGCGAGATGAACCAGCATATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CCA 72 bp ATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTaGGTCACTCTCAAGGCAGTGAGAAAGGAAGTCCTT +
Preference number: 3 (lower is better)
Translates to: MVEELAGGPSHL*VTLKAVRKEVL
Trigger: AAGGACTTCCTTTCTCACTGCCTTGAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR TCA 72 bp TTCTTCAGCTGCTGCAAAGCTTTGGCGATGACCGGCTaGCTGGATGTCTGCTCCTGGCACAGAGTCATAAGT +
Preference number: 3 (lower is better)
Translates to: FFSCCKALAMTG*LDVCSWHRVIS
Trigger: ACTTATGACTCTGTGCCAGGAGCAGACATCCAGTCAGCCGGTCATCGCCAAAGCTTTGCAGCAGCTGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CCA 72 bp AGTGCTGAATCCCTCTGGAGTGGGGATAATGAGGTGTaGGTTAGGAGGGTCACTATGGCATCGAGGTACCTT +
Preference number: 3 (lower is better)
Translates to: SAESLWSGDNEV*VRRVTMASRYL
Trigger: AAGGTACCTCGATGCCATAGTGACCCTCCTAACCCACACCTCATTATCCCCACTCCAGAGGGATTCAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CCA 72 bp TCTGTGCAAACCTTGACAAACGAATGGTCGAGGAGCTaGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCA +
Preference number: 3 (lower is better)
Translates to: SVQTLTNEWSRS*LAVHLIFGSLS
Trigger: TGAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGTTTGCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CAA 90 bp CATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCCAAAATCTCCCAGTTaGATTAATCCAGATGAGGTA +
Preference number: 3 (lower is better)
Translates to: HLYDNTPQTPDVGRTPMAPKSPS*INPDEV
Trigger: TACCTCATCTGGATTAATCAAACTGGGAGATTTTGG...GGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CAA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACTCAAAAGCGTCAATGTaGCAGTCGGGCTTCTCCAAG +
Preference number: 3 (lower is better)
Translates to: LERSKHYADVTVLSRARHSKASM*QSGFSK
Trigger: CTTGGAGAAGCCCGACTGCAACATTGACGCTTTTGA...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR CAA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCCCTCCAGAGGGCCTTTaGCCACATCAGACAAACAGG +
Preference number: 3 (lower is better)
Translates to: LLNLERSKHYADVTVLSRPPEGL*PHQTNR
Trigger: CCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGG...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR TCA 72 bp ACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTaGTGTCACGGTTCTCAGTCGCGCGAGACACGGAGG +
Preference number: 3 (lower is better)
Translates to: TSFEPRKVKTLR*CHGSQSRETRR
Trigger: CCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR GCA 72 bp TGTGGTCCACGCGGTCAATGGCATTGCTTATCCTGTTaGATAGCTCCAATGCATCATTCTTCAGCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: CGPRGQWHCLSC*IAPMHHSSAAA
Trigger: TGCAGCAGCTGAAGAATGATGCATTGGAGCTATGCAACAGGATAAGCAATGCCATTGACCGCGTGGACCACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR CAA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGATTTCCTGCAGCTGCATaGAGTAACTGCAAAATAATA +
Preference number: 3 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRFPAAA*SNCKII
Trigger: TATTATTTTGCAGTTACTCAATGCAGCTGCAGGAAA...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR CAA 90 bp ATACTCATGCCAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGGAGGTAAGGAAGATATaGGCACCTTTAATGTCACGG +
Preference number: 3 (lower is better)
Translates to: ILMPRPLASHHLYDNTPQEVRKI*APLMSR
Trigger: CCGTGACATTAAAGGTGCCAATATCTTCCTTACCTC...CTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTGGCATGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR TCA 72 bp TGTCCGAAGTTCCCAACTTCTTCTTGTGGACCCACTTaGATCTCCTCTTGGATATGCTGGTTCATCTCGCTC +
Preference number: 3 (lower is better)
Translates to: CPKFPTSSCGPT*ISSWICWFISL
Trigger: GAGCGAGATGAACCAGCATATCCAAGAGGAGATTCAAGTGGGTCCACAAGAAGAAGTTGGGAACTTCGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR GCA 72 bp ATATTGGCACCTTTAATGTCACGGTGGACTATGCCATaGTCATGGAGGACGTTGATCGCAATGGTGATCTGC +
Preference number: 3 (lower is better)
Translates to: ILAPLMSRWTMP*SWRTLIAMVIC
Trigger: GCAGATCACCATTGCGATCAACGTCCTCCATGAGCATGGCATAGTCCACCGTGACATTAAAGGTGCCAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR CCA 72 bp GTCCCCAGGGTGCTGTTCACTTCACCAGGCATGGTCTaGGCATTGTTTTTGAGCTTTACTGAACATCCAAAA +
Preference number: 3 (lower is better)
Translates to: VPRVLFTSPGMV*ALFLSFTEHPK
Trigger: TTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGAAGTGAACAGCACCCTGGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR-3UTR CAA 90 bp TGGCTGATTAGTGTCCGAAGTTCCCAACTTCTTCTTGTGGACCCACTTGAATCTACGCGGTCAATGGCATaGCTTATCCTGTTGCATAGC +
Preference number: 3 (lower is better)
Translates to: WLISVRSSQLLLVDPLESTRSMA*LILLHS
Trigger: GCTATGCAACAGGATAAGCAATGCCATTGACCGCGT...AGATTCAAGTGGGTCCACAAGAAGAAGTTGGGAACTTCGGACACTAATCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR CAA 90 bp TCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCCAGAGGGCCTTTaGCCACATCAGACAAACAGG +
Preference number: 3 (lower is better)
Translates to: SHPHFIHNLKVVLILMPRPPEGL*PHQTNR
Trigger: CCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGG...CCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR TCA 72 bp CTCATGGAGGACGTTGATCGCAATGGTGATCTGCTTTaGATACAGCCTAATCACATGTTCCTGAAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: LMEDVDRNGDLL*IQPNHMFLKSQ
Trigger: CTGGGACTTCAGGAACATGTGATTAGGCTGTATTCAAAGCAGATCACCATTGCGATCAACGTCCTCCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR GCA 72 bp AACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTaGAGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTAT +
Preference number: 3 (lower is better)
Translates to: NRSSRRSDACHL*SLQSWKVKKAY
Trigger: ATAAGCCTTTTTAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR GCA 72 bp GCATTTTATGTAGATCCTCTTCAAAAGCGTCAATGTTaGAGTCGGGCTTCTCCAAGTCCTCCAGAACCTCCT +
Preference number: 3 (lower is better)
Translates to: AFYVDPLQKRQC*SRASPSPPEPP
Trigger: AGGAGGTTCTGGAGGACTTGGAGAAGCCCGACTGCAACATTGACGCTTTTGAAGAGGATCTACATAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR CAA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATCCTCCAGAGGGCCTTTaGCCACATCAGACAAACAGG +
Preference number: 3 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYPPEGL*PHQTNR
Trigger: CCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGG...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR TCA 72 bp GTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATaGCATTCAGAAGGACTCGGCAGAGAACTAGGAAGG +
Preference number: 3 (lower is better)
Translates to: VSAPILTSDTHV*HSEGLGRELGR
Trigger: CCTTCCTAGTTCTCTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
3UTR TCA 72 bp GATCACCGTGCTTGGTCAGAAGCAGATAGGCATCGATaGGTACGTCATCTGAATCTTTTGAACAGTCCTTTC +
Preference number: 3 (lower is better)
Translates to: DHRAWSEADRHR*VRHLNLLNSPF
Trigger: GAAAGGACTGTTCAAAAGATTCAGATGACGTACTCATCGATGCCTATCTGCTTCTGACCAAGCACGGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CCA 72 bp TCATCAACCTCAGCATCAAATTCTGATGTGAACATGTaGTCCACGCGGTCAATGGCATTGCTTATCCTGTTG +
Preference number: 3 (lower is better)
Translates to: SSTSASNSDVNM*STRSMALLILL
Trigger: CAACAGGATAAGCAATGCCATTGACCGCGTGGACCACATGTTCACATCAGAATTTGATGCTGAGGTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 72 bp GACAGATTCAGATTCATCAACCTCAGCATCAAATTCTaGTGTGAACATGTGGTCCACGCGGTCAATGGCATT +
Preference number: 3 (lower is better)
Translates to: DRFRFINLSIKF*CEHVVHAVNGI
Trigger: AATGCCATTGACCGCGTGGACCACATGTTCACATCAGAATTTGATGCTGAGGTTGATGAATCTGAATCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 72 bp ATTCAGATTCATCAACCTCAGCATCAAATTCTGATGTaGACATGTGGTCCACGCGGTCAATGGCATTGCTTA +
Preference number: 3 (lower is better)
Translates to: IQIHQPQHQILM*TCGPRGQWHCL
Trigger: TAAGCAATGCCATTGACCGCGTGGACCACATGTTCACATCAGAATTTGATGCTGAGGTTGATGAATCTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR GCA 72 bp CTCTTCTCCTCAGCAAGAGTGTCTGGAACAAACATTTaGAAGTTTTCTAACCCAGGAATTTGCACCTTGACA +
Preference number: 3 (lower is better)
Translates to: LFSSARVSGTNI*KFSNPGICTLT
Trigger: TGTCAAGGTGCAAATTCCTGGGTTAGAAAACTTGCAAATGTTTGTTCCAGACACTCTTGCTGAGGAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CCA 72 bp CGGTACCTCTTTTCTTCAAACAATCGGACTGACTTCTaGATAGCTTCTATGGGTCCTAGTTTAGAAGCAGTA +
Preference number: 3 (lower is better)
Translates to: RYLFSSNNRTDF*IASMGPSLEAV
Trigger: TACTGCTTCTAAACTAGGACCCATAGAAGCTATCCAGAAGTCAGTCCGATTGTTTGAAGAAAAGAGGTACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR TCA 72 bp CCTGAATCATTGCTTCTCGGTAGTACTGTTGCAAGGTaGCAGATTCAGATTCATCAACCTCAGCATCAAATT +
Preference number: 3 (lower is better)
Translates to: PESLLLGSTVAR*QIQIHQPQHQI
Trigger: AATTTGATGCTGAGGTTGATGAATCTGAATCTGTCACCTTGCAACAGTACTACCGAGAAGCAATGATTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR GCA 72 bp TTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTaGTCCAATCTTAACTTCAGACACTCATGTATGACA +
Preference number: 3 (lower is better)
Translates to: LILKRDGSPAGL*SNLNFRHSCMT
Trigger: TGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
3UTR CCA 72 bp AAACCTGTAACAGGACTGTGTGGTTTTCCTATGACATaGCCAATGCATTCATTCATCAAGGCTTGTAAACTC +
Preference number: 3 (lower is better)
Translates to: KPVTGLCGFPMT*PMHSFIKACKL
Trigger: GAGTTTACAAGCCTTGATGAATGAATGCATTGGCCATGTCATAGGAAAACCACACAGTCCTGTTACAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR-3UTR CAA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTTCAGTAATCAGCCTTTaGCATTACAAACCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: LQLLLNLERSKHYADVTVSVISL*HYKPAA
Trigger: AGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGA...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
3UTR-3UTR CAA 90 bp AACGTGCATAACATTATCATAGGACTTAGGCGTATCACAAACTTGACCAATGATGCATTGCTTATCCTGTaGCATAGCTCCAATGCATCA +
Preference number: 3 (lower is better)
Translates to: NVHNIIIGLRRITNLTNDALLIL*HSSNAS
Trigger: TGATGCATTGGAGCTATGCAACAGGATAAGCAATGC...ATCATTGGTCAAGTTTGTGATACGCCTAAGTCCTATGATAATGTTATGCACGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR GCA 72 bp ATGATACTCAAATCCAAAATTGTACCCCTGAATCATTaGTTCTCGGTAGTACTGTTGCAAGGTGACAGATTC +
Preference number: 3 (lower is better)
Translates to: MILKSKIVPLNH*FSVVLLQGDRF
Trigger: GAATCTGTCACCTTGCAACAGTACTACCGAGAAGCAATGATTCAGGGGTACAATTTTGGATTTGAGTATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR GCA 72 bp GGGGTGTTTGATGCCTTCGAATATTTTCAATTCGTCTaGAGTTTCCTTGATAGTCTTATGGTCATTAGGTTG +
Preference number: 3 (lower is better)
Translates to: GVFDAFEYFQFV*SFLDSLMVIRL
Trigger: CAACCTAATGACCATAAGACTATCAAGGAAACTGCAGACGAATTGAAAATATTCGAAGGCATCAAACACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCGGCGGGCAGTAAGCTaGAGCCTGGCGCGGGGCACC +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGRRAVS*SLARGT
Trigger: GGTGCCCCGCGCCAGGCTGCAGCTTACTGCCCGCCG...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGGCGGGCAGTAAGCTaGAGCCTGGCGCGGGGCACC +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVRRAVS*SLARGT
Trigger: GGTGCCCCGCGCCAGGCTGCAGCTTACTGCCCGCCG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCCAGCAGCAGCAGGGCTaGCATGGCTCCGCGCGTCGG +
Preference number: 4 (lower is better)
Translates to: PDVGRTPMALSFGTSDDFQQQQG*HGSARR
Trigger: CCGACGCGCGGAGCCATGGCAGCCCTGCTGCTGCTG...GAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCCCGAAGTGCGGGAGTaGCTCGACTCCGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVPEVRE*LDSASA
Trigger: GGCGGAGGCGGAGTCGAGTCACTCCCGCACTTCGGG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCAGCAGCAGCAGGGCTaGCATGGCTCCGCGCGTCGG +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVQQQQG*HGSARR
Trigger: CCGACGCGCGGAGCCATGGCAGCCCTGCTGCTGCTG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCGCGCCGCGGCCATCTTaGAAACGGCGACCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVAPRPS*KRRPAE
Trigger: CTCGGCCGGTCGCCGTTTCCAAGATGGCCGCGGCGC...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366919.6
ENST00000392142.9
CDS-3UTR TCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATTGGCGGCGGCAGGCGTaGCGGCAAAGGCGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHWRRQA*RQRREE
Trigger: CTCCTCCCGCCTTTGCCGTCACGCCTGCCGCCGCCA...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACCTGAGGCACGACTTTaGCAGGCTGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: THPRLQMSAARPWPSPLAPEARL*QAVPPR
Trigger: CCTGGGAGGCACAGCCTGTCAAAGTCGTGCCTCAGG...TGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACGGCGGGCAGTAAGCTaGAGCCTGGCGCGGGGCACC +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRRRAVS*SLARGT
Trigger: GGTGCCCCGCGCCAGGCTGCAGCTTACTGCCCGCCG...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCGCAGCAGGGCTGCCATaGCTCCGCGCGTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIAAGLP*LRASEG
Trigger: GCCTTCCGACGCGCGGAGCCATGGCAGCCCTGCTGC...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCACCGGAGCCCCGAAGTaGGGGAGTGACTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVTGAPK*GSDSTP
Trigger: CGGAGTCGAGTCACTCCCGCACTTCGGGGCTCCGGT...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGCGGCGGGCAGTAAGCTaGAGCCTGGCGCGGGGCACC +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRRRAVS*SLARGT
Trigger: GGTGCCCCGCGCCAGGCTGCAGCTTACTGCCCGCCG...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGGCACGGAGCCCCGCATaGCCGCGGCGGGCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRARSPA*PRRAVS
Trigger: GCTTACTGCCCGCCGCGGCCATGCGGGGCTCCGTGC...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCAAGGCAGCAGCAGGGCTGCCATaGCTCCGCGCGTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: MVEELAGGPSHLWVTLKAAAGLP*LRASEG
Trigger: GCCTTCCGACGCGCGGAGCCATGGCAGCCCTGCTGC...TGCCTTGAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTAGGGGCTGGGCCGACTaGCAGCAACAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGRGWAD*QQQQQQ
Trigger: CTGCTGCTGCTGTTGCTGCCAGTCGGCCCAGCCCCT...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCTCCTCCGTGGGGCTTaGGTGACGACTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGLLRGA*VTTQGP
Trigger: AGGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAG...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACGCTGTGCCTCCCAGGTaGCCCAGCTGTCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYAVPPR*PSCPLN
Trigger: ATTCAGAGGACAGCTGGGGCACCTGGGAGGCACAGC...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGGCAGCAGGGCTGCCATaGCTCCGCGCGTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRAAGLP*LRASEG
Trigger: GCCTTCCGACGCGCGGAGCCATGGCAGCCCTGCTGC...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGGCAGCACTCGGGTTCTaGCTCGGTCTCGGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQAALGF*LGLGFR
Trigger: CCGGAACCCGAGACCGAGTCAGAACCCGAGTGCTGC...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTTTGGCGATGACCGGCTaGCTGGATGTCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGLAMTG*LDVCSW
Trigger: CCAGGAGCAGACATCCAGTCAGCCGGTCATCGCCAA...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGAACCGGAGCCCCGAAGTaGGGGAGTGACTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRTGAPK*GSDSTP
Trigger: CGGAGTCGAGTCACTCCCGCACTTCGGGGCTCCGGT...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATGGCTTCTCTCATCCGTaGACGGAGCCCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHGFSHP*TEPRMA
Trigger: GGCCATGCGGGGCTCCGTGCACGGATGAGAGAAGCC...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGCGCCGCGGCCATCTTaGAAACGGCGACCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKAPRPS*KRRPAE
Trigger: CTCGGCCGGTCGCCGTTTCCAAGATGGCCGCGGCGC...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366919.6
ENST00000392142.9
CDS-3UTR CCA 90 bp ATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTCATCTCGCTCCTCCGTaGGGCTTGAGTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: MTTHPRLQMSAARPWPSPHLAPP*GLSDDS
Trigger: TGAGTCGTCACTCAAGCCCCACGGAGGAGCGAGATG...AGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATTCGGCCGCACGCCCATaGCCCTCTCCTTTGGCACGA +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNSAARP*PSPLAR
Trigger: TCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACGAATGGTCGAGGAGCTaGCTGGCGGTCCATCTCATC +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYEWSRS*LAVHLI
Trigger: GATGAGATGGACCGCCAGCCAGCTCCTCGACCATTC...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGAGGGGCTGGGCCGACTaGCAGCAACAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEERGWAD*QQQQQQ
Trigger: CTGCTGCTGCTGTTGCTGCCAGTCGGCCCAGCCCCT...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR CAA 72 bp CTGGAACCCCTGGTATCATGGGCACTGCTGATGGATTaGGGCAGCACAGAGTCACCACCAGAGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LEPLVSWALLMD*GSTESPPEGLG
Trigger: GCCCAGCCCCTCTGGTGGTGACTCTGTGCTGCCCAAATCCATCAGCAGTGCCCATGATACCAGGGGTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGCCCCAGCTGTCCTCTaGATCACGGGCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNAPAVL*ITGSIT
Trigger: GGTGATCGAGCCCGTGATTCAGAGGACAGCTGGGGC...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGGCCCCAGCTGTCCTCTaGATCACGGGCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEAPAVL*ITGSIT
Trigger: GGTGATCGAGCCCGTGATTCAGAGGACAGCTGGGGC...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCCTGAGGCACGACTTTaGCAGGCTGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHPEARL*QAVPPR
Trigger: CCTGGGAGGCACAGCCTGTCAAAGTCGTGCCTCAGG...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTTCCGTGGGGCTTGAGTaGCGACTCAGGGACCTAAAC +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGSVGLE*RLRDLN
Trigger: GTTTAGGTCCCTGAGTCGTCACTCAAGCCCCACGGA...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCTTCTCTCATCCGTaGACGGAGCCCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRGFSHP*TEPRMA
Trigger: GGCCATGCGGGGCTCCGTGCACGGATGAGAGAAGCC...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCTGAATCTCCCAATGTaGCCTCTTGCCTCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVLNLPM*PLASPP
Trigger: TGGCGGCGAGGCAAGAGGGCACATTGGGAGATTCAG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAAGCTTCCCGGCCTGTaGTTCTCCTCCCCGTATGTA +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYKLPGL*FSSPYV
Trigger: TACATACGGGGAGGAGAAGCACAGGCCGGGAAGCTT...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGGCGCCGGGGCTACGGTaGGCGGCGAGGGACAAGCCT +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAAPGLR*AARDKP
Trigger: AGGCTTGTCCCTCGCCGCCCACCGTAGCCCCGGCGC...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366919.6
CDS-3UTR CCA 90 bp TCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCCTGGATGTCTGCTCCTaGCACAGAGTCATAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SAARPWPSPLARVMTSGALDVCS*HRVISP
Trigger: GGGACTTATGACTCTGTGCCAGGAGCAGACATCCAG...GGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGATCGGCCGCACGCCCATaGCCCTCTCCTTTGGCACGA +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRSAARP*PSPLAR
Trigger: TCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAAGGGGCTGGGCCGACTaGCAGCAACAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTRGWAD*QQQQQQ
Trigger: CTGCTGCTGCTGTTGCTGCCAGTCGGCCCAGCCCCT...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR CAA 72 bp CTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTaGGCACGAGTGATGACTTCAGGTGCCATGTATGCT +
Preference number: 4 (lower is better)
Translates to: LQMSAARPWPSP*ARVMTSGAMYA
Trigger: AGCATACATGGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAGCCCCAGCTGTCCTCTaGATCACGGGCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTAPAVL*ITGSIT
Trigger: GGTGATCGAGCCCGTGATTCAGAGGACAGCTGGGGC...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACCAGTCACCATCTCTATaGCAACACACCCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYQSPSL*QHTPDS
Trigger: GGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTG...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGGCTTCTCTCATCCGTaGACGGAGCCCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKGFSHP*TEPRMA
Trigger: GGCCATGCGGGGCTCCGTGCACGGATGAGAGAAGCC...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAAACCTTGACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTGGCTTCTCTCATCCGTaGACGGAGCCCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: ANLDKRMVEELAGGPSHLGFSHP*TEPRMA
Trigger: GGCCATGCGGGGCTCCGTGCACGGATGAGAGAAGCC...AAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGGGCTTCTCTCATCCGTaGACGGAGCCCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: QGLLPVTISMTTHPRLQMGFSHP*TEPRMA
Trigger: GGCCATGCGGGGCTCCGTGCACGGATGAGAGAAGCC...CATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCTGTGCTCCAGTCTGGTaGTCCCCAGCCAAGAGAATC +
Preference number: 4 (lower is better)
Translates to: HLYDNTPQTPDVGRTPMACAPVW*SPAKRI
Trigger: GATTCTCTTGGCTGGGGAGCACCAGACTGGAGCACA...GGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCAGGTGCCATGTATGCTaGTGTCCCCAGGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVRCHVC*CPQGAV
Trigger: AACAGCACCCTGGGGACAGCAGCATACATGGCACCT...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCATGGGCGCCGCGGCCATCTTaGAAACGGCGACCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: EGLGRELGRQVRMKVNPWAPRPS*KRRPAE
Trigger: CTCGGCCGGTCGCCGTTTCCAAGATGGCCGCGGCGC...CCATGGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542952.5
CDS-3UTR CCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACTCTGTCGAGGTGTGCTaGGGGGAGAGGTACCATAAA +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYSVEVC*GERYHK
Trigger: TTTATGGTACCTCTCCCCCCAGCACACCTCGACAGA...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCCGGCTCATTACCTTTaGATGGTCGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: HLYDNTPQTPDVGRTPMAPAHYL*MVEGKG
Trigger: TCCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGG...GGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCGCCTCTCAAGCTTCTTaGATATGCAGTCCCGCGACT +
Preference number: 4 (lower is better)
Translates to: PDVGRTPMALSFGTSDDFASQAS*ICSPAT
Trigger: AGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGC...GAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTTTCTGTGCTCCAGTCTaGTGCTCCCCAGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGFCAPV*CSPAKR
Trigger: TCTCTTGGCTGGGGAGCACCAGACTGGAGCACAGAA...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACGGTCCACGCGGTCAATaGCATTGCTTATCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYGPRGQ*HCLSCC
Trigger: GCAACAGGATAAGCAATGCCATTGACCGCGTGGACC...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCTCTGATGTGAACATGTaGTCCACGCGGTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: SAARPWPSPLARVMTSGASDVNM*STRSMA
Trigger: TGCCATTGACCGCGTGGACCACATGTTCACATCAGA...GGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCGGTCCATCTCATCTTTaGGTCACTCTCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SAARPWPSPLARVMTSGAGPSHL*VTLKAV
Trigger: CACTGCCTTGAGAGTGACCCAAAGATGAGATGGACC...GGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCGGTCGAGGAGCTGGCTaGCGGTCCATCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIGRGAG*RSISSL
Trigger: CAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACC...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCACCTTGACAAACGAATaGTCGAGGAGCTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: HLYDNTPQTPDVGRTPMATLTNE*SRSWLA
Trigger: CGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGT...GGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTGCAGCACTCGGGTTCTaGCTCGGTCTCGGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLAALGF*LGLGFR
Trigger: CCGGAACCCGAGACCGAGTCAGAACCCGAGTGCTGC...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACGCAGCACTCGGGTTCTaGCTCGGTCTCGGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNAALGF*LGLGFR
Trigger: CCGGAACCCGAGACCGAGTCAGAACCCGAGTGCTGC...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTAGGACTCTTGCAAGCTaGATCTCCCAATGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGRTLAS*ISQCAL
Trigger: GAGGGCACATTGGGAGATTCAGCTTGCAAGAGTCCT...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACCTGGGGCTGAAAGCCTaGATTCTGCTGCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYLGLKA*ILLLFP
Trigger: TGGAAATAGCAGCAGAATTCAGGCTTTCAGCCCCAG...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCCCTGAGGCACGACTTTaGCAGGCTGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTPEARL*QAVPPR
Trigger: CCTGGGAGGCACAGCCTGTCAAAGTCGTGCCTCAGG...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCGCAAAGCTTTGGCGATaGCCGGCTGACTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIAKLWR*PADWMS
Trigger: AGACATCCAGTCAGCCGGTCATCGCCAAAGCTTTGC...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GATGACCGGCTGACTGGATGTCTGCTCCTGGCACAGAGTCATAAGTCCCTCAATCTCCTCCGTGGGGCTTaGGTGACGACTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: DDRLTGCLLLAQSHKSLNLLRGA*VTTQGP
Trigger: AGGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAG...ATTGAGGGACTTATGACTCTGTGCCAGGAGCAGACATCCAGTCAGCCGGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp TCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCTCACTCTCAAGGCAGTaGGAAAGGAAGTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SAARPWPSPLARVMTSGASLSRQ*ERKSFP
Trigger: AGGAAAGGACTTCCTTTCTCACTGCCTTGAGAGTGA...GGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATCGGGGGCTGTTCCGATaGATGGCTGTAACAGGACTG +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNRGLFR*MAVTGL
Trigger: CAGTCCTGTTACAGCCATTCATCGGAACAGCCCCCG...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348824.11
ENST00000366920.6
CDS-3UTR GCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACACCGGAGCCCCGAAGTaGGGGAGTGACTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNTGAPK*GSDSTP
Trigger: CGGAGTCGAGTCACTCCCGCACTTCGGGGCTCCGGT...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGCTGAATCTCCCAATGTaGCCTCTTGCCTCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: NTTLMSRFSVARDTEETELNLPM*PLASPP
Trigger: TGGCGGCGAGGCAAGAGGGCACATTGGGAGATTCAG...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCGGAGTGGCTTTGCACTaGCCTTCTACTGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: PDVGRTPMALSFGTSDDFGVALH*PSTEVP
Trigger: TGGTACTTCAGTAGAAGGGCAGTGCAAAGCCACTCC...GAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCACAAACAGAGTGCCTaGACCCTGTCCTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVHKQSA*TLSWKS
Trigger: AGACTTCCAGGACAGGGTGCAGGCACTCTGTTTGTG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCCCCACGACACAGCACTaGATTTCTCCTCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: PDVGRTPMALSFGTSDDFPTTQH*ISPQMK
Trigger: CTTCATCTGAGGAGAAATGCAGTGCTGTGTCGTGGG...GAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCAATCTCCTCTTGGATATaGTGGTTCATCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: THPRLQMSAARPWPSPLAISSWI*WFISLL
Trigger: GAGGAGCGAGATGAACCAGCATATCCAAGAGGAGAT...TGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCTCAGTCCTAGAAGTCTaGCGTGCAGGTCTGGCTATA +
Preference number: 4 (lower is better)
Translates to: PDVGRTPMALSFGTSDDFSVLEV*RAGLAI
Trigger: TATAGCCAGACCTGCACGCCAGACTTCTAGGACTGA...GAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCATCTTTGTTCCAGGAGTaGCTTTGCACTGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: THPRLQMSAARPWPSPLASLFQE*LCTALL
Trigger: TAGAAGGGCAGTGCAAAGCCACTCCTGGAACAAAGA...TGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCTTCTGTGCTCCAGTCTaGTGCTCCCCAGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PVTISMTTHPRLQMSAARFCAPV*CSPAKR
Trigger: TCTCTTGGCTGGGGAGCACCAGACTGGAGCACAGAA...GCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCTGGATGTCTGCTCCTaGCACAGAGTCATAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVLDVCS*HRVISP
Trigger: GGGACTTATGACTCTGTGCCAGGAGCAGACATCCAG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACGGGGATAATGAGGTGTaGGTTAGGAGGGTCACTATG +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYGDNEV*VRRVTM
Trigger: CATAGTGACCCTCCTAACCCACACCTCATTATCCCC...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGCATCTCGCTCCTCCGTaGGGCTTGAGTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEHLAPP*GLSDDS
Trigger: TGAGTCGTCACTCAAGCCCCACGGAGGAGCGAGATG...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTTCGGCCGCACGCCCATaGCCCTCTCCTTTGGCACGA +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSSAARP*PSPLAR
Trigger: TCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ATACTCATGCCAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGTCGGCCGCACGCCCATaGCCCTCTCCTTTGGCACGA +
Preference number: 4 (lower is better)
Translates to: ILMPRPLASHHLYDNTPQSAARP*PSPLAR
Trigger: TCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA...CTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTGGCATGAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACTCTTTCAGGGATTGGTaGCTTATGTCCCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYSFRDW*LMSHPH
Trigger: GTGGGGATGGGACATAAGCCACCAATCCCTGAAAGA...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCTCTTTCAGGGATTGGTaGCTTATGTCCCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: PDVGRTPMALSFGTSDDFSFRDW*LMSHPH
Trigger: GTGGGGATGGGACATAAGCCACCAATCCCTGAAAGA...GAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGTCGAGGAGCTGGCTaGCGGTCCATCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNGRGAG*RSISSL
Trigger: CAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACC...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGTGCTGAATCCCTCTaGAGTGGGGATAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: PDVGRTPMALSFGTSDDFSAESL*SGDNEV
Trigger: CACCTCATTATCCCCACTCCAGAGGGATTCAGCACT...GAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACCATTTTCAGGAACGCTaGAACCCCTGGTATCATGGG +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYHFQER*NPWYHG
Trigger: CCCATGATACCAGGGGTTCCAGCGTTCCTGAAAATG...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCTTTTACCTGCTCAAATaGGACCCTCTGGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVFYLLK*DPLALE
Trigger: CTCCAACGCCAGAGGGTCTCATTTGAGCAGGTAAAA...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTTTGGCGATGACCGGCTaGCTGGATGTCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSLAMTG*LDVCSW
Trigger: CCAGGAGCAGACATCCAGTCAGCCGGTCATCGCCAA...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAAACCTTGACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTTGGCGATGACCGGCTaGCTGGATGTCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ANLDKRMVEELAGGPSHLLAMTG*LDVCSW
Trigger: CCAGGAGCAGACATCCAGTCAGCCGGTCATCGCCAA...AAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGGCAAAGCTTTGGCGATaGCCGGCTGACTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEAKLWR*PADWMS
Trigger: AGACATCCAGTCAGCCGGTCATCGCCAAAGCTTTGC...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGCAAAGCTTTGGCGATaGCCGGCTGACTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNAKLWR*PADWMS
Trigger: AGACATCCAGTCAGCCGGTCATCGCCAAAGCTTTGC...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCATGTATGCTGCTTCCGTGGGGCTTGAGTaGCGACTCAGGGACCTAAAC +
Preference number: 4 (lower is better)
Translates to: PWPSPLARVMTSGAMYAASVGLE*RLRDLN
Trigger: GTTTAGGTCCCTGAGTCGTCACTCAAGCCCCACGGA...AGCAGCATACATGGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTCCTCCGTGGGGCTTaGGTGACGACTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSLLRGA*VTTQGP
Trigger: AGGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAG...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTACTCCTCCGTGGGGCTTaGGTGACGACTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLLLRGA*VTTQGP
Trigger: AGGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAG...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCCCCGGTGTCGACGCTaGTGCAGGTGTACACCTTCC +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSPRCRR*CRCTPS
Trigger: GGAAGGTGTACACCTGCATCAGCGTCGACACCGGGG...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCAGTCACCATCTCTATaGCAACACACCCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: PVTISMTTHPRLQMSAARQSPSL*QHTPDS
Trigger: GGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTG...GCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTGTCAAAACACTACGCTaGTGTCACGGTTCTCAGTCG +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGVKTLR*CHGSQS
Trigger: CGACTGAGAACCGTGACATCAGCGTAGTGTTTTGAC...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACACGGGGGCTGTTCCGATaGATGGCTGTAACAGGACTG +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTRGLFR*MAVTGL
Trigger: CAGTCCTGTTACAGCCATTCATCGGAACAGCCCCCG...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348824.11
ENST00000366920.6
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGACTGAATCTCCCAATGTaGCCTCTTGCCTCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRLNLPM*PLASPP
Trigger: TGGCGGCGAGGCAAGAGGGCACATTGGGAGATTCAG...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCATGTATGCTGCTCTGAATCTCCCAATGTaGCCTCTTGCCTCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PWPSPLARVMTSGAMYAALNLPM*PLASPP
Trigger: TGGCGGCGAGGCAAGAGGGCACATTGGGAGATTCAG...AGCAGCATACATGGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCCAGATTCAGGACTCTTaGAAGCTGAATCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: SAARPWPSPLARVMTSGAQIQDS*KLNLPM
Trigger: CATTGGGAGATTCAGCTTGCAAGAGTCCTGAATCTG...GGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCTTCCAGGAGTGGCTTTaGACTGCCCTTCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVFQEWL*TALLLK
Trigger: CTTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAA...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCAAGCTTCTTGGATATaGAGTCCCGCGACTGGATGT +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVQASWI*SPATGC
Trigger: ACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTGTGCTCCAGTCTGGTaGTCCCCAGCCAAGAGAATC +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQCAPVW*SPAKRI
Trigger: GATTCTCTTGGCTGGGGAGCACCAGACTGGAGCACA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACATGTCTACTAAAGCCTaGTTCTGTGCTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYMSTKA*FCAPVW
Trigger: CCAGACTGGAGCACAGAAGCAGGCTTTAGTAGACAT...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACCAAAAGCGTCAATGTTaGAGTCGGGCTTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYQKRQC*SRASPS
Trigger: ACTTGGAGAAGCCCGACTGCAACATTGACGCTTTTG...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCCAAAAGCGTCAATGTTaGAGTCGGGCTTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PDVGRTPMALSFGTSDDFQKRQC*SRASPS
Trigger: ACTTGGAGAAGCCCGACTGCAACATTGACGCTTTTG...GAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCCGGTGGACTATGCCATaGTCATGGAGGACGTTGATC +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIRWTMP*SWRTLI
Trigger: GATCAACGTCCTCCATGAGCATGGCATAGTCCACCG...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATTTCAGGTGCCATGTATaGTGCTGTCCCCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHFRCHV*CCPQGA
Trigger: AGCACCCTGGGGACAGCAGCATACATGGCACCTGAA...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTTCAGGTGCCATGTATaGTGCTGTCCCCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEFRCHV*CCPQGA
Trigger: AGCACCCTGGGGACAGCAGCATACATGGCACCTGAA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTAGTGATGACTTCAGGTaGCATGTATGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGSDDFR*HVCCCP
Trigger: GGGACAGCAGCATACATGGCACCTGAAGTCATCACT...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCTTGTGCTCATACTCATaGCAAGGCCTCTTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVLCSYS*QGLLPV
Trigger: GACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAA...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCGACGCTTGTCACCTGTaGAGTCTTCAGTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVDACHL*SLQSWK
Trigger: CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTC...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCTCAGTCCTAGAAGTCTaGCGTGCAGGTCTGGCTATA +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVSVLEV*RAGLAI
Trigger: TATAGCCAGACCTGCACGCCAGACTTCTAGGACTGA...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCAATACTCAAGAGAGATaGTTCTCCAGCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SAARPWPSPLARVMTSGANTQER*FSSRSL
Trigger: CAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATT...GGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCTCTGATGTGAACATGTaGTCCACGCGGTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVSDVNM*STRSMA
Trigger: TGCCATTGACCGCGTGGACCACATGTTCACATCAGA...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACTTGAGTCGCCCACCTaGGTCTTGTACCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRLESPT*VLYLYH
Trigger: GTGGTAGAGGTACAAGACCCAGGTGGGCGACTCAAG...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGCTTGAGTCGCCCACCTaGGTCTTGTACCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEELESPT*VLYLYH
Trigger: GTGGTAGAGGTACAAGACCCAGGTGGGCGACTCAAG...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCCCCGAAGTGCGGGAGTaGCTCGACTCCGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAPEVRE*LDSASA
Trigger: GGCGGAGGCGGAGTCGAGTCACTCCCGCACTTCGGG...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR TCA 90 bp GCAGGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGCCCGAAGTGCGGGAGTaGCTCGACTCCGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: AGLCSNLNFRHSCMTFRRPEVRE*LDSASA
Trigger: GGCGGAGGCGGAGTCGAGTCACTCCCGCACTTCGGG...CCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542952.5
CDS-3UTR TCA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGAGGACTCTTGCAAGCTaGATCTCCCAATGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: NTTLMSRFSVARDTEETERTLAS*ISQCAL
Trigger: GAGGGCACATTGGGAGATTCAGCTTGCAAGAGTCCT...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCGAACCTCCTGCAGCATaGACTGGTAGTACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIEPPAA*TGSTAS
Trigger: TGAAGCAGTACTACCAGTTCATGCTGCAGGAGGTTC...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGGCCCCAGCTGTCCTCTaGATCACGGGCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAAPAVL*ITGSIT
Trigger: GGTGATCGAGCCCGTGATTCAGAGGACAGCTGGGGC...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACCTGAGGCACGACTTTaGCAGGCTGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARPEARL*QAVPPR
Trigger: CCTGGGAGGCACAGCCTGTCAAAGTCGTGCCTCAGG...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTCAACAGTCTCCACCTaGGGCACGACTTTGACAGGC +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRSTVST*GTTLTG
Trigger: GCCTGTCAAAGTCGTGCCTCAGGTGGAGACTGTTGA...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCATCAAATTCTGATGTaGACATGTGGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVHQILM*TCGPRG
Trigger: ACCGCGTGGACCACATGTTCACATCAGAATTTGATG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTTCTTGTGGACCCACTTaGATCTCCTCTTGGATATGC +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGSCGPT*ISSWIC
Trigger: GCATATCCAAGAGGAGATTCAAGTGGGTCCACAAGA...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCTCTTGTGGACCCACTTaGATCTCCTCTTGGATATGC +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVSCGPT*ISSWIC
Trigger: GCATATCCAAGAGGAGATTCAAGTGGGTCCACAAGA...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TCTCTCACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCCCCCGGTGTCGACGCTaGTGCAGGTGTACACCTTCC +
Preference number: 4 (lower is better)
Translates to: SLTSCLILKRDGSPAGLCPRCRR*CRCTPS
Trigger: GGAAGGTGTACACCTGCATCAGCGTCGACACCGGGG...GCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGCAGTCACCATCTCTATaGCAACACACCCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEQSPSL*QHTPDS
Trigger: GGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTG...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCATCTGTGCAAACCTTaGCAAACGAATGGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVHLCKP*QTNGRG
Trigger: TCCTCGACCATTCGTTTGTCAAGGTTTGCACAGATG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTCGGCGGGCAGTAAGCTaGAGCCTGGCGCGGGGCACC +
Preference number: 4 (lower is better)
Translates to: GLCSNLNFRHSCMTFRRTRRAVS*SLARGT
Trigger: GGTGCCCCGCGCCAGGCTGCAGCTTACTGCCCGCCG...AGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
CDS-3UTR GCA 90 bp ACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCAATGGCTTCTCTCATCCGTaGACGGAGCCCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: TSCLILKRDGSPAGLCSNGFSHP*TEPRMA
Trigger: GGCCATGCGGGGCTCCGTGCACGGATGAGAGAAGCC...ATTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
CDS-3UTR GCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATCCTAGAAGTCTGGCGTaGAGGTCTGGCTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNPRSLA*RSGYRH
Trigger: ATGCCTATAGCCAGACCTGCACGCCAGACTTCTAGG...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGCACAAACAGAGTGCCTaGACCCTGTCCTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: NTTLMSRFSVARDTEETEHKQSA*TLSWKS
Trigger: AGACTTCCAGGACAGGGTGCAGGCACTCTGTTTGTG...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCAAGCTTCTTGGATATaGAGTCCCGCGACTGGATGT +
Preference number: 4 (lower is better)
Translates to: PVTISMTTHPRLQMSAARQASWI*SPATGC
Trigger: ACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTG...GCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTGTGCTCCAGTCTGGTaGTCCCCAGCCAAGAGAATC +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRCAPVW*SPAKRI
Trigger: GATTCTCTTGGCTGGGGAGCACCAGACTGGAGCACA...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTGCTATACGTGCCCTTTaGAAGGAACCATCCATTAGC +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGAIRAL*KEPSIS
Trigger: GCTAATGGATGGTTCCTTGCAAAGGGCACGTATAGC...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGCTGTGCCTCCCAGGTaGCCCAGCTGTCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHAVPPR*PSCPLN
Trigger: ATTCAGAGGACAGCTGGGGCACCTGGGAGGCACAGC...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACGCTGTGCCTCCCAGGTaGCCCAGCTGTCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNAVPPR*PSCPLN
Trigger: ATTCAGAGGACAGCTGGGGCACCTGGGAGGCACAGC...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCGATTATCCACCTGCATaGTTCTCAGGGTGTCAACAG +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVDYPPA*FSGCQQ
Trigger: CTGTTGACACCCTGAGAAGCATGCAGGTGGATAATC...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCTCATTCTTCAGCTGCTaGAAAGCTTTGGCGATGACC +
Preference number: 4 (lower is better)
Translates to: HLYDNTPQTPDVGRTPMASFFSC*KALAMT
Trigger: GGTCATCGCCAAAGCTTTGCAGCAGCTGAAGAATGA...GGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGCGGTCAATGGCATTaGTTATCCTGTTGCATAGCT +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVRGQWH*LSCCIA
Trigger: AGCTATGCAACAGGATAAGCAATGCCATTGACCGCG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACGTACCCCTGAATCATTaGTTCTCGGTAGTACTGTTG +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYVPLNH*FSVVLL
Trigger: CAACAGTACTACCGAGAAGCAATGATTCAGGGGTAC...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCATCTCCTCTTGGATATaGTGGTTCATCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVISSWI*WFISLL
Trigger: GAGGAGCGAGATGAACCAGCATATCCAAGAGGAGAT...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGCGGTGGACTATGCCATaGTCATGGAGGACGTTGATC +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEERWTMP*SWRTLI
Trigger: GATCAACGTCCTCCATGAGCATGGCATAGTCCACCG...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTGTCACGGTGGACTATaGCATGCTCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQCHGGL*HAHGGR
Trigger: ACGTCCTCCATGAGCATGGCATAGTCCACCGTGACA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGATTCAGGTGCCATGTATaGTGCTGTCCCCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRFRCHV*CCPQGA
Trigger: AGCACCCTGGGGACAGCAGCATACATGGCACCTGAA...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTGATGACTTCAGGTaGCATGTATGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHISDDFR*HVCCCP
Trigger: GGGACAGCAGCATACATGGCACCTGAAGTCATCACT...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCCAGCAGCAGCAGGGCTaGCATGGCTCCGCGCGTCGG +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAQQQQG*HGSARR
Trigger: CCGACGCGCGGAGCCATGGCAGCCCTGCTGCTGCTG...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGTCTGTCGAGGTGTGCTaGGGGGAGAGGTACCATAAA +
Preference number: 4 (lower is better)
Translates to: NTTLMSRFSVARDTEETESVEVC*GERYHK
Trigger: TTTATGGTACCTCTCCCCCCAGCACACCTCGACAGA...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTCTGTCGAGGTGTGCTaGGGGGAGAGGTACCATAAA +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEESVEVC*GERYHK
Trigger: TTTATGGTACCTCTCCCCCCAGCACACCTCGACAGA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCTCATTACCTTTGGATaGTCGAGGGGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGLITFG*SRGRDF
Trigger: GAAATCCCTTCCCCTCGACCATCCAAAGGTAATGAG...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCATGCAGTCCCGCGACTaGATGTCGAAGCTGTTATCT +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIMQSRD*MSKLLS
Trigger: AGATAACAGCTTCGACATCCAGTCGCGGGACTGCAT...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCATGCAGTCCCGCGACTaGATGTCGAAGCTGTTATCT +
Preference number: 4 (lower is better)
Translates to: PVTISMTTHPRLQMSAARMQSRD*MSKLLS
Trigger: AGATAACAGCTTCGACATCCAGTCGCGGGACTGCAT...GCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATGCCTCTCAAGCTTCTTaGATATGCAGTCCCGCGACT +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHASQAS*ICSPAT
Trigger: AGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGC...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGGCCTCTCAAGCTTCTTaGATATGCAGTCCCGCGACT +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEASQAS*ICSPAT
Trigger: AGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGC...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACACTTGAGTCGCCCACCTaGGTCTTGTACCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTLESPT*VLYLYH
Trigger: GTGGTAGAGGTACAAGACCCAGGTGGGCGACTCAAG...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCTTGAGTCGCCCACCTaGGTCTTGTACCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: PLASHHLYDNTPQTPDVGLESPT*VLYLYH
Trigger: GTGGTAGAGGTACAAGACCCAGGTGGGCGACTCAAG...GCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACTGTAACAGGACTGTGTaGTTTTCCTATGACATGGCC +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYCNRTV*FSYDMA
Trigger: GGCCATGTCATAGGAAAACCACACAGTCCTGTTACA...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCGGGGATAATGAGGTGTaGGTTAGGAGGGTCACTATG +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIGDNEV*VRRVTM
Trigger: CATAGTGACCCTCCTAACCCACACCTCATTATCCCC...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCCCAACTTCTTCTTGTaGACCCACTTGAATCTCCTC +
Preference number: 4 (lower is better)
Translates to: HLYDNTPQTPDVGRTPMAPNFFL*THLNLL
Trigger: GAGGAGATTCAAGTGGGTCCACAAGAAGAAGTTGGG...GGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCGAATGGTCGAGGAGCTaGCTGGCGGTCCATCTCATC +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTEWSRS*LAVHLI
Trigger: GATGAGATGGACCGCCAGCCAGCTCCTCGACCATTC...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTGAATGGTCGAGGAGCTaGCTGGCGGTCCATCTCATC +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSEWSRS*LAVHLI
Trigger: GATGAGATGGACCGCCAGCCAGCTCCTCGACCATTC...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGGAATGGTCGAGGAGCTaGCTGGCGGTCCATCTCATC +
Preference number: 4 (lower is better)
Translates to: QGLLPVTISMTTHPRLQMEWSRS*LAVHLI
Trigger: GATGAGATGGACCGCCAGCCAGCTCCTCGACCATTC...CATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
3UTR CAA 72 bp TTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTaGCCACATCAGACAAACAGGAGCAGCAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FNLVATSPPEGL*PHQTNRSSRRS
Trigger: ACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCATATCTGGGATGGCTTaGCGGGCTGTATATAAAAAG +
Preference number: 4 (lower is better)
Translates to: PDVGRTPMALSFGTSDDFISGMA*RAVYKK
Trigger: CTTTTTATATACAGCCCGTCAAGCCATCCCAGATAT...GAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGATTTTACCTGCTCAAATaGGACCCTCTGGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRFYLLK*DPLALE
Trigger: CTCCAACGCCAGAGGGTCTCATTTGAGCAGGTAAAA...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCTCAGACACTCATGTATaGCATTCAGAAGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHISDTHV*HSEGLG
Trigger: GCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGA...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATGAACCTCCTGCAGCATaGACTGGTAGTACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHEPPAA*TGSTAS
Trigger: TGAAGCAGTACTACCAGTTCATGCTGCAGGAGGTTC...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTTCAACAGTCTCCACCTaGGGCACGACTTTGACAGGC +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSSTVST*GTTLTG
Trigger: GCCTGTCAAAGTCGTGCCTCAGGTGGAGACTGTTGA...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAAACCTTGACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTCAACAGTCTCCACCTaGGGCACGACTTTGACAGGC +
Preference number: 4 (lower is better)
Translates to: ANLDKRMVEELAGGPSHLSTVST*GTTLTG
Trigger: GCCTGTCAAAGTCGTGCCTCAGGTGGAGACTGTTGA...AAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCTCAGCATCAAATTCTaGTGTGAACATGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVLSIKF*CEHVVH
Trigger: GTGGACCACATGTTCACATCAGAATTTGATGCTGAG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACTGTGTGGTTTTCCTATaGCATGGCCAATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYCVVFL*HGQCIH
Trigger: ATGAATGCATTGGCCATGTCATAGGAAAACCACACA...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTATCCGTGGGGCTTGAGTaGCGACTCAGGGACCTAAAC +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLSVGLE*RLRDLN
Trigger: GTTTAGGTCCCTGAGTCGTCACTCAAGCCCCACGGA...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCTTCCTCTTTGCCATTTaGAGGTCACCTTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIFLFAI*RSPSSS
Trigger: GCTTGAGGAAGGTGACCTTCAAATGGCAAAGAGGAA...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCAATGGTGATCTGCTTTaGATACAGCCTAATCACATG +
Preference number: 4 (lower is better)
Translates to: SAARPWPSPLARVMTSGANGDLL*IQPNHM
Trigger: CATGTGATTAGGCTGTATTCAAAGCAGATCACCATT...GGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCAAATGGTGATCTGCTTTaGATACAGCCTAATCACATG +
Preference number: 4 (lower is better)
Translates to: THPRLQMSAARPWPSPLANGDLL*IQPNHM
Trigger: CATGTGATTAGGCTGTATTCAAAGCAGATCACCATT...TGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCAGTTTTTGAGCTTTACTaGACATCCAAAATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: THPRLQMSAARPWPSPLAVFELY*TSKISQ
Trigger: CTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAAC...TGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTGAGCAGCAGGAGAAGTaGCGCTTGTCACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSEQQEK*RLSPVQ
Trigger: CTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTC...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGAGTCAAAACACTACGCTaGTGTCACGGTTCTCAGTCG +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRVKTLR*CHGSQS
Trigger: CGACTGAGAACCGTGACATCAGCGTAGTGTTTTGAC...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCGATGTTTGGTTGACATaGGTTTCATCTGTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVDVWLT*VSSVEV
Trigger: CACCTCGACAGATGAAACGCATGTCAACCAAACATC...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGACCTAGAAGTCTGGCGTaGAGGTCTGGCTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRPRSLA*RSGYRH
Trigger: ATGCCTATAGCCAGACCTGCACGCCAGACTTCTAGG...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGAATTGTCCGTCCTGCATaGCAGGCTTGTAGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRIVRPA*QACSSN
Trigger: GTTAGAGCTACAAGCCTGGCATGCAGGACGGACAAT...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTTCCAGGAGTGGCTTTaGACTGCCCTTCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEFQEWL*TALLLK
Trigger: CTTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCGCTATACGTGCCCTTTaGAAGGAACCATCCATTAGC +
Preference number: 4 (lower is better)
Translates to: PVTISMTTHPRLQMSAARAIRAL*KEPSIS
Trigger: GCTAATGGATGGTTCCTTGCAAAGGGCACGTATAGC...GCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCCCACGACACAGCACTaGATTTCTCCTCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHPTTQH*ISPQMK
Trigger: CTTCATCTGAGGAGAAATGCAGTGCTGTGTCGTGGG...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCAAGCTTCCCGGCCTGTaGTTCTCCTCCCCGTATGTA +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTKLPGL*FSSPYV
Trigger: TACATACGGGGAGGAGAAGCACAGGCCGGGAAGCTT...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCTTTCAGCAGCATTCCTaGAATGTCACAGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SAARPWPSPLARVMTSGAFQQHS*NVTEKL
Trigger: AAGCTTTTCTGTGACATTGCAGGAATGCTGCTGAAA...GGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAGCTGTGCCTCCCAGGTaGCCCAGCTGTCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARAVPPR*PSCPLN
Trigger: ATTCAGAGGACAGCTGGGGCACCTGGGAGGCACAGC...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTGTCACGGTGGACTATaGCATGCTCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRCHGGL*HAHGGR
Trigger: ACGTCCTCCATGAGCATGGCATAGTCCACCGTGACA...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATAGTGATGACTTCAGGTaGCATGTATGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNSDDFR*HVCCCP
Trigger: GGGACAGCAGCATACATGGCACCTGAAGTCATCACT...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTTGTGCTCATACTCATaGCAAGGCCTCTTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEELCSYS*QGLLPV
Trigger: GACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGATTGTGCTCATACTCATaGCAAGGCCTCTTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRLCSYS*QGLLPV
Trigger: GACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAA...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCAAGGCAGACGCTTGTCACCTGTaGAGTCTTCAGTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: MVEELAGGPSHLWVTLKADACHL*SLQSWK
Trigger: CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTC...TGCCTTGAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGCTCCAGAGGGCCTTTTaGCACATCAGACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEELQRAF*HIRQTG
Trigger: TCCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAG...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCAGCAGCAGCAGGGCTaGCATGGCTCCGCGCGTCGG +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSQQQQG*HGSARR
Trigger: CCGACGCGCGGAGCCATGGCAGCCCTGCTGCTGCTG...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCAAGGCAATTAGACCGACTGGCTaGCCTCCCCACATTATTCCT +
Preference number: 4 (lower is better)
Translates to: MVEELAGGPSHLWVTLKAIRPTG*PPHIIP
Trigger: AGGAATAATGTGGGGAGGCCAGCCAGTCGGTCTAAT...TGCCTTGAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCACCCCACATGGGATCTaGAAATTCAGAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVTPHGI*KFRKLH
Trigger: GTGGAGTTTTCTGAATTTCCAGATCCCATGTGGGGT...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000544041.5
CDS-3UTR CCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATTCTGATGTGAACATGTaGTCCACGCGGTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHSDVNM*STRSMA
Trigger: TGCCATTGACCGCGTGGACCACATGTTCACATCAGA...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTCTGATGTGAACATGTaGTCCACGCGGTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEESDVNM*STRSMA
Trigger: TGCCATTGACCGCGTGGACCACATGTTCACATCAGA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGGGATAATGAGGTGTaGGTTAGGAGGGTCACTATG +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNGDNEV*VRRVTM
Trigger: CATAGTGACCCTCCTAACCCACACCTCATTATCCCC...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCCCCAACTTCTTCTTGTaGACCCACTTGAATCTCCTC +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIPNFFL*THLNLL
Trigger: GAGGAGATTCAAGTGGGTCCACAAGAAGAAGTTGGG...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACGCAGTATCTTTACTCTaGCTGATTAGTGTCCGAAGT +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYAVSLL*LISVRS
Trigger: ACTTCGGACACTAATCAGCCAGAGTAAAGATACTGC...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCAATCGGACTGACTTCTaGATAGCTTCTATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVNRTDF*IASMGP
Trigger: AGGACCCATAGAAGCTATCCAGAAGTCAGTCCGATT...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGATCTTTCAGGGATTGGTaGCTTATGTCCCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRSFRDW*LMSHPH
Trigger: GTGGGGATGGGACATAAGCCACCAATCCCTGAAAGA...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGGGTCCATCTCATCTTTaGGTCACTCTCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEGPSHL*VTLKAV
Trigger: CACTGCCTTGAGAGTGACCCAAAGATGAGATGGACC...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR CAA 72 bp CCCAACTTCTTCTTGTGGACCCACTTGAATCTCCTCTaGGATATGCTGGTTCATCTCGCTCCTCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PNFFLWTHLNLL*DMLVHLAPPWG
Trigger: GCCCCACGGAGGAGCGAGATGAACCAGCATATCCAAGAGGAGATTCAAGTGGGTCCACAAGAAGAAGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCCCGAAGTGCGGGAGTaGCTCGACTCCGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLPEVRE*LDSASA
Trigger: GGCGGAGGCGGAGTCGAGTCACTCCCGCACTTCGGG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR TCA 90 bp TGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTCGGCAGGCAGCACTCGGGTTCTaGCTCGGTCTCGGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: CSNLNFRHSCMTFRRTRQAALGF*LGLGFR
Trigger: CCGGAACCCGAGACCGAGTCAGAACCCGAGTGCTGC...CTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
CDS-3UTR TCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCAGGACTCTTGCAAGCTaGATCTCCCAATGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTRTLAS*ISQCAL
Trigger: GAGGGCACATTGGGAGATTCAGCTTGCAAGAGTCCT...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCATATCTGGGATGGCTTaGCGGGCTGTATATAAAAAG +
Preference number: 4 (lower is better)
Translates to: HLYDNTPQTPDVGRTPMAISGMA*RAVYKK
Trigger: CTTTTTATATACAGCCCGTCAAGCCATCCCAGATAT...GGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCAATGCTCATGATGTGTTaGGTAACCTACAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: THPRLQMSAARPWPSPLAMLMMC*VTYNLC
Trigger: ACAAAGATTGTAGGTTACTCAACACATCATGAGCAT...TGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTTTTACCTGCTCAAATaGGACCCTCTGGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TNEWSRSWLAVHLIFGSLFYLLK*DPLALE
Trigger: CTCCAACGCCAGAGGGTCTCATTTGAGCAGGTAAAA...GAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCAACTGCACATAATCTaGACCCCACATGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: PLASHHLYDNTPQTPDVGQLHII*TPHGIW
Trigger: CCAGATCCCATGTGGGGTTCAGATTATGTGCAGTTG...GCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATTCAGACACTCATGTATaGCATTCAGAAGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNSDTHV*HSEGLG
Trigger: GCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGA...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACCTTGACATACTGTTTTaGTTTCAGAACATCCAGGAG +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYLDILF*FQNIQE
Trigger: CTCCTGGATGTTCTGAAATCAAAACAGTATGTCAAG...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCCAGGAATTTGCACCTTaGCATACTGTTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: SAARPWPSPLARVMTSGAQEFAP*HTVLIS
Trigger: TGAAATCAAAACAGTATGTCAAGGTGCAAATTCCTG...GGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTCAACAGTCTCCACCTaGGGCACGACTTTGACAGGC +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLSTVST*GTTLTG
Trigger: GCCTGTCAAAGTCGTGCCTCAGGTGGAGACTGTTGA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACTCAACAGTCTCCACCTaGGGCACGACTTTGACAGGC +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHSTVST*GTTLTG
Trigger: GCCTGTCAAAGTCGTGCCTCAGGTGGAGACTGTTGA...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCTGGAAAGCTTTTCTCTaGATTGTGAGATGCGCAGAC +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIWKAFL*IVRCAD
Trigger: GTCTGCGCATCTCACAATTCAGAGAAAAGCTTTCCA...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ATGACATTCAGAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTTTGGCGATGACCGGCTaGCTGGATGTCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: MTFRRTRQRTRKAGSNEGLAMTG*LDVCSW
Trigger: CCAGGAGCAGACATCCAGTCAGCCGGTCATCGCCAA...ACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTCTGAATGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAGCAAAGCTTTGGCGATaGCCGGCTGACTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLAKLWR*PADWMS
Trigger: AGACATCCAGTCAGCCGGTCATCGCCAAAGCTTTGC...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACGCAAAGCTTTGGCGATaGCCGGCTGACTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNAKLWR*PADWMS
Trigger: AGACATCCAGTCAGCCGGTCATCGCCAAAGCTTTGC...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATCATCAAATTCTGATGTaGACATGTGGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNHQILM*TCGPRG
Trigger: ACCGCGTGGACCACATGTTCACATCAGAATTTGATG...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGAGAAAATCAAATCCTTaGGTCGCCCACCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQRKSNP*VAHLGL
Trigger: AAGACCCAGGTGGGCGACTCAAGGATTTGATTTTCT...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCCTCCTCCGTGGGGCTTaGGTGACGACTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRLLRGA*VTTQGP
Trigger: AGGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAG...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCTATCTTTACTCTGGCTaGTTAGTGTCCGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIYLYSG*LVSEVP
Trigger: GGGAACTTCGGACACTAATCAGCCAGAGTAAAGATA...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTTCCTCTTTGCCATTTaGAGGTCACCTTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEFLFAI*RSPSSS
Trigger: GCTTGAGGAAGGTGACCTTCAAATGGCAAAGAGGAA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCCAGATTGGGGTGTTTaGTGCCTTCGAATATTTTCA +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVPDWGV*CLRIFS
Trigger: TGAAAATATTCGAAGGCATCAAACACCCCAATCTGG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCCTAATCACATGTTCCTaGAGTCCCAGCCTTGACACC +
Preference number: 4 (lower is better)
Translates to: KRMVEELAGGPSHLWVTLLITCS*SPSLDT
Trigger: GGTGTCAAGGCTGGGACTTCAGGAACATGTGATTAG...GAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGCAGTCACCATCTCTATaGCAACACACCCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKQSPSL*QHTPDS
Trigger: GGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTG...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAAACCTTGACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTCAGTCACCATCTCTATaGCAACACACCCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: ANLDKRMVEELAGGPSHLQSPSL*QHTPDS
Trigger: GGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTG...AAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTCACTCTCAAGGCAGTaGGAAAGGAAGTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEESLSRQ*ERKSFP
Trigger: AGGAAAGGACTTCCTTTCTCACTGCCTTGAGAGTGA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGCATCTGTGCAAACCTTaGCAAACGAATGGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEHLCKP*QTNGRG
Trigger: TCCTCGACCATTCGTTTGTCAAGGTTTGCACAGATG...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAGAGCAGCAGGAGAAGTaGCGCTTGTCACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRAREQQEK*RLSPVQ
Trigger: CTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTC...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCACCGGAGCCCCGAAGTaGGGGAGTGACTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDATGAPK*GSDSTP
Trigger: CGGAGTCGAGTCACTCCCGCACTTCGGGGCTCCGGT...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp CTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTCGGCAGAGAACTAGGACCGGAGCCCCGAAGTaGGGGAGTGACTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: LNFRHSCMTFRRTRQRTRTGAPK*GSDSTP
Trigger: CGGAGTCGAGTCACTCCCGCACTTCGGGGCTCCGGT...CCTAGTTCTCTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542952.5
CDS-3UTR GCA 90 bp TTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTGCCAGTCGGCGGGCAGTAAGCTaGAGCCTGGCGCGGGGCACC +
Preference number: 4 (lower is better)
Translates to: FIHNLKVVLILMPRPLASRRAVS*SLARGT
Trigger: GGTGCCCCGCGCCAGGCTGCAGCTTACTGCCCGCCG...ACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCCAGATTCAGGACTCTTaGAAGCTGAATCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIQIQDS*KLNLPM
Trigger: CATTGGGAGATTCAGCTTGCAAGAGTCCTGAATCTG...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCCCTAGAAGTCTGGCGTaGAGGTCTGGCTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTPRSLA*RSGYRH
Trigger: ATGCCTATAGCCAGACCTGCACGCCAGACTTCTAGG...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGCCTAGAAGTCTGGCGTaGAGGTCTGGCTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKPRSLA*RSGYRH
Trigger: ATGCCTATAGCCAGACCTGCACGCCAGACTTCTAGG...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGGGAGTGGCTTTGCACTaGCCTTCTACTGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRGVALH*PSTEVP
Trigger: TGGTACTTCAGTAGAAGGGCAGTGCAAAGCCACTCC...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAGGAGTGGCTTTGCACTaGCCTTCTACTGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTGVALH*PSTEVP
Trigger: TGGTACTTCAGTAGAAGGGCAGTGCAAAGCCACTCC...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTATTATCCGTTTTACCTaGTCAAATGAGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGIIRFT*SNETLW
Trigger: CCAGAGGGTCTCATTTGAGCAGGTAAAACGGATAAT...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTGTGCTCCAGTCTGGTaGTCCCCAGCCAAGAGAATC +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLCAPVW*SPAKRI
Trigger: GATTCTCTTGGCTGGGGAGCACCAGACTGGAGCACA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCATCGTTCTTTACCAATaGTATACGTGCCCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: PDVGRTPMALSFGTSDDFIVLYQ*YTCPLQ
Trigger: TTGCAAAGGGCACGTATAGCATTGGTAAAGAACGAT...GAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCCCCACGACACAGCACTaGATTTCTCCTCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: KRMVEELAGGPSHLWVTLPTTQH*ISPQMK
Trigger: CTTCATCTGAGGAGAAATGCAGTGCTGTGTCGTGGG...GAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCTCTCCAGCAGGTCTCTaGTCCAATCTTAACTTCAGA +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHISPAGL*SNLNFR
Trigger: TCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGA...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACAAGCTTCCCGGCCTGTaGTTCTCCTCCCCGTATGTA +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHKLPGL*FSSPYV
Trigger: TACATACGGGGAGGAGAAGCACAGGCCGGGAAGCTT...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATTCATTCTTCAGCTGCTaGAAAGCTTTGGCGATGACC +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNSFFSC*KALAMT
Trigger: GGTCATCGCCAAAGCTTTGCAGCAGCTGAAGAATGA...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTCATTCTTCAGCTGCTaGAAAGCTTTGGCGATGACC +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQSFFSC*KALAMT
Trigger: GGTCATCGCCAAAGCTTTGCAGCAGCTGAAGAATGA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGCATCATTCTTCAGCTaGTGCAAAGCTTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNASFFS*CKALAM
Trigger: CATCGCCAAAGCTTTGCAGCAGCTGAAGAATGATGC...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGATCTCCTCTTGGATATaGTGGTTCATCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEISSWI*WFISLL
Trigger: GAGGAGCGAGATGAACCAGCATATCCAAGAGGAGAT...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATATCTCCTCTTGGATATaGTGGTTCATCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHISSWI*WFISLL
Trigger: GAGGAGCGAGATGAACCAGCATATCCAAGAGGAGAT...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCCGGTGGACTATGCCATaGTCATGGAGGACGTTGATC +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTRWTMP*SWRTLI
Trigger: GATCAACGTCCTCCATGAGCATGGCATAGTCCACCG...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTTGTCACGGTGGACTATaGCATGCTCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSCHGGL*HAHGGR
Trigger: ACGTCCTCCATGAGCATGGCATAGTCCACCGTGACA...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTAGGTGCCATGTATGCTaGTGTCCCCAGGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSRCHVC*CPQGAV
Trigger: AACAGCACCCTGGGGACAGCAGCATACATGGCACCT...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACAGGTGCCATGTATGCTaGTGTCCCCAGGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNRCHVC*CPQGAV
Trigger: AACAGCACCCTGGGGACAGCAGCATACATGGCACCT...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACAGGTGCCATGTATGCTaGTGTCCCCAGGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHRCHVC*CPQGAV
Trigger: AACAGCACCCTGGGGACAGCAGCATACATGGCACCT...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGACTCCAGAGGGCCTTTTaGCACATCAGACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRLQRAF*HIRQTG
Trigger: TCCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAG...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTTCCAGTGTCTTTATGTaGAGGCTGATTTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGSSVFM*RLIWCI
Trigger: AATGCACCAAATCAGCCTCCACATAAAGACACTGGA...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTCTTTGTTCCAGGAGTaGCTTTGCACTGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQSLFQE*LCTALL
Trigger: TAGAAGGGCAGTGCAAAGCCACTCCTGGAACAAAGA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACCCGGCTCATTACCTTTaGATGGTCGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHPAHYL*MVEGKG
Trigger: TCCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGG...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGCCTCTCAAGCTTCTTaGATATGCAGTCCCGCGACT +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKASQAS*ICSPAT
Trigger: AGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGC...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTTTCTGTGCTCCAGTCTaGTGCTCCCCAGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSFCAPV*CSPAKR
Trigger: TCTCTTGGCTGGGGAGCACCAGACTGGAGCACAGAA...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTATTCTGTGCTCCAGTCTaGTGCTCCCCAGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLFCAPV*CSPAKR
Trigger: TCTCTTGGCTGGGGAGCACCAGACTGGAGCACAGAA...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACATGGAAGCCCTTTCTCTaGCTTCATGGAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTWKPFL*LHGRAP
Trigger: AGGAGCTCTTCCATGAAGCCAGAGAAAGGGCTTCCA...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACCTCAGCAAGAGTGTCTaGAACAAACATTTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYLSKSV*NKHLQV
Trigger: AACTTGCAAATGTTTGTTCCAGACACTCTTGCTGAG...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCCTGGATGTCTGCTCCTaGCACAGAGTCATAAGTCCC +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTLDVCS*HRVISP
Trigger: GGGACTTATGACTCTGTGCCAGGAGCAGACATCCAG...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCGGTCCACGCGGTCAATaGCATTGCTTATCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTGPRGQ*HCLSCC
Trigger: GCAACAGGATAAGCAATGCCATTGACCGCGTGGACC...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACCTTGAGTCGCCCACCTaGGTCTTGTACCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNLESPT*VLYLYH
Trigger: GTGGTAGAGGTACAAGACCCAGGTGGGCGACTCAAG...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCACCCCTGAATCCCTCTaGAGTGGGGATAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTTPESL*SGDNEV
Trigger: CACCTCATTATCCCCACTCCAGAGGGATTCAGGGGT...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348824.11
ENST00000366919.6
CDS-3UTR CCA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACGCAATTCAGCAGCTATaGAAGCCAATCGATCATTTT +
Preference number: 4 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYAIQQL*KPIDHF
Trigger: AAAATGATCGATTGGCTTCCATAGCTGCTGAATTGC...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACCTTTAATGTCACGGTaGACTATGCCATGCTCATGG +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRPLMSR*TMPCSW
Trigger: CCATGAGCATGGCATAGTCCACCGTGACATTAAAGG...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATCCTTTAATGTCACGGTaGACTATGCCATGCTCATGG +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNPLMSR*TMPCSW
Trigger: CCATGAGCATGGCATAGTCCACCGTGACATTAAAGG...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCCTTTAATGTCACGGTaGACTATGCCATGCTCATGG +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHPLMSR*TMPCSW
Trigger: CCATGAGCATGGCATAGTCCACCGTGACATTAAAGG...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAGGTCGAGGAGCTGGCTaGCGGTCCATCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARGRGAG*RSISSL
Trigger: CAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACC...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGGGTCGAGGAGCTGGCTaGCGGTCCATCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAGRGAG*RSISSL
Trigger: CAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACC...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGAGGAGACAGAGGCGATaGTCCGTGTACAGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: NTTLMSRFSVARDTEETERRQRR*SVYSSN
Trigger: ATTACTACTGTACACGGACCATCGCCTCTGTCTCCT...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCATGTATGCTGCTGAACCCCTGGTATCATaGGCACTGCTGATGGATTTG +
Preference number: 4 (lower is better)
Translates to: PWPSPLARVMTSGAMYAAEPLVS*ALLMDL
Trigger: CAAATCCATCAGCAGTGCCCATGATACCAGGGGTTC...AGCAGCATACATGGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGCATTTTCAGGAACGCTaGAACCCCTGGTATCATGGG +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRHFQER*NPWYHG
Trigger: CCCATGATACCAGGGGTTCCAGCGTTCCTGAAAATG...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACCCACATTATTCCTCTaGTGTTTGGTTGACATGCGT +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRPTLFL*CLVDMR
Trigger: ACGCATGTCAACCAAACATCAGAGGAATAATGTGGG...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCCTGAAGAGCCTGCAATaGTGGATAAAGTGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHILKSLQ*WIKCFY
Trigger: ATAGAAGCACTTTATCCATCATTGCAGGCTCTTCAG...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CATGAACTGGTAGTACTGCTTCATCAGCAGGCCGCCCTTCAGGACCTCCTTACACAACTGCACATAATCTaGACCCCACATGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: HELVVLLHQQAALQDLLTQLHII*TPHGIW
Trigger: CCAGATCCCATGTGGGGTTCAGATTATGTGCAGTTG...TGTAAGGAGGTCCTGAAGGGCGGCCTGCTGATGAAGCAGTACTACCAGTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
CDS-3UTR TCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTAAACTATGCGATGCTTaGGGTAATTGCTGTAGCATT +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGKLCDA*GNCCSI
Trigger: AATGCTACAGCAATTACCTCAAGCATCGCATAGTTT...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGCTGGGGCTGAAAGCCTaGATTCTGCTGCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKLGLKA*ILLLFP
Trigger: TGGAAATAGCAGCAGAATTCAGGCTTTCAGCCCCAG...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCTTGACATACTGTTTTaGTTTCAGAACATCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVLDILF*FQNIQE
Trigger: CTCCTGGATGTTCTGAAATCAAAACAGTATGTCAAG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATGCAGATAGGCATCGATaGGTACGTCATCTGAATCTT +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHADRHR*VRHLNL
Trigger: AAGATTCAGATGACGTACTCATCGATGCCTATCTGC...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGGCAGATAGGCATCGATaGGTACGTCATCTGAATCTT +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQADRHR*VRHLNL
Trigger: AAGATTCAGATGACGTACTCATCGATGCCTATCTGC...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCAAGGCAGCAGATAGGCATCGATaGGTACGTCATCTGAATCTT +
Preference number: 4 (lower is better)
Translates to: MVEELAGGPSHLWVTLKAADRHR*VRHLNL
Trigger: AAGATTCAGATGACGTACTCATCGATGCCTATCTGC...TGCCTTGAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCCCTGAGGCACGACTTTaGCAGGCTGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAPEARL*QAVPPR
Trigger: CCTGGGAGGCACAGCCTGTCAAAGTCGTGCCTCAGG...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTGGAAAGCTTTTCTCTaGATTGTGAGATGCGCAGAC +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQWKAFL*IVRCAD
Trigger: GTCTGCGCATCTCACAATTCAGAGAAAAGCTTTCCA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATTGGAAAGCTTTTCTCTaGATTGTGAGATGCGCAGAC +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHWKAFL*IVRCAD
Trigger: GTCTGCGCATCTCACAATTCAGAGAAAAGCTTTCCA...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCTTGGCGATGACCGGCTaGCTGGATGTCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRLAMTG*LDVCSW
Trigger: CCAGGAGCAGACATCCAGTCAGCCGGTCATCGCCAA...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACACATCAAATTCTGATGTaGACATGTGGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTHQILM*TCGPRG
Trigger: ACCGCGTGGACCACATGTTCACATCAGAATTTGATG...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAAGAAAATCAAATCCTTaGGTCGCCCACCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTRKSNP*VAHLGL
Trigger: AAGACCCAGGTGGGCGACTCAAGGATTTGATTTTCT...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCCTCCTCCGTGGGGCTTaGGTGACGACTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDALLRGA*VTTQGP
Trigger: AGGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAG...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTCTTGTGGACCCACTTaGATCTCCTCTTGGATATGC +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRSCGPT*ISSWIC
Trigger: GCATATCCAAGAGGAGATTCAAGTGGGTCCACAAGA...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTATCTTTACTCTGGCTaGTTAGTGTCCGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEYLYSG*LVSEVP
Trigger: GGGAACTTCGGACACTAATCAGCCAGAGTAAAGATA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCGGCGTATCACAAACTTaGCCAATGATATTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVGVSQT*PMIFFL
Trigger: GAGAAAGAATATCATTGGTCAAGTTTGTGATACGCC...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGATTCCTCTTTGCCATTTaGAGGTCACCTTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRFLFAI*RSPSSS
Trigger: GCTTGAGGAAGGTGACCTTCAAATGGCAAAGAGGAA...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCCCAGATTGGGGTGTTTaGTGCCTTCGAATATTTTCA +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIPDWGV*CLRIFS
Trigger: TGAAAATATTCGAAGGCATCAAACACCCCAATCTGG...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTCACTCTCAAGGCAGTaGGAAAGGAAGTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRSLSRQ*ERKSFP
Trigger: AGGAAAGGACTTCCTTTCTCACTGCCTTGAGAGTGA...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCATGTATGCTGCTTCACTCTCAAGGCAGTaGGAAAGGAAGTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PWPSPLARVMTSGAMYAASLSRQ*ERKSFP
Trigger: AGGAAAGGACTTCCTTTCTCACTGCCTTGAGAGTGA...AGCAGCATACATGGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCATCGCAGTACTCCATaGAGATGTACATTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: HLYDNTPQTPDVGRTPMAHRSTP*RCTFLH
Trigger: ATGAAGAAATGTACATCTTCATGGAGTACTGCGATG...GGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544041.5
CDS-3UTR GCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATCAGATTCAGGACTCTTaGAAGCTGAATCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNQIQDS*KLNLPM
Trigger: CATTGGGAGATTCAGCTTGCAAGAGTCCTGAATCTG...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGCAGATTCAGGACTCTTaGAAGCTGAATCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQQIQDS*KLNLPM
Trigger: CATTGGGAGATTCAGCTTGCAAGAGTCCTGAATCTG...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGATGTTTGGTTGACATaGGTTTCATCTGTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNDVWLT*VSSVEV
Trigger: CACCTCGACAGATGAAACGCATGTCAACCAAACATC...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATATTGTCCGTCCTGCATaGCAGGCTTGTAGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: PRPLASHHLYDNTPQTPDIVRPA*QACSSN
Trigger: GTTAGAGCTACAAGCCTGGCATGCAGGACGGACAAT...ATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTTCCAGGAGTGGCTTTaGACTGCCCTTCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTFQEWL*TALLLK
Trigger: CTTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAA...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATTTCCAGGAGTGGCTTTaGACTGCCCTTCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: PRPLASHHLYDNTPQTPDFQEWL*TALLLK
Trigger: CTTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAA...ATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTACACAAACAGAGTGCCTaGACCCTGTCCTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLHKQSA*TLSWKS
Trigger: AGACTTCCAGGACAGGGTGCAGGCACTCTGTTTGTG...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACCACAAACAGAGTGCCTaGACCCTGTCCTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHHKQSA*TLSWKS
Trigger: AGACTTCCAGGACAGGGTGCAGGCACTCTGTTTGTG...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGCAAGCTTCTTGGATATaGAGTCCCGCGACTGGATGT +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKQASWI*SPATGC
Trigger: ACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTG...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAATGTCTACTAAAGCCTaGTTCTGTGCTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTMSTKA*FCAPVW
Trigger: CCAGACTGGAGCACAGAAGCAGGCTTTAGTAGACAT...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGCCCCATCTGCTTCAGTaGTTTGTCTACAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: NTTLMSRFSVARDTEETEPHLLQ*FVYKWS
Trigger: AGACCATTTGTAGACAAAGCACTGAAGCAGATGGGG...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCATCGTTCTTTACCAATaGTATACGTGCCCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: HLYDNTPQTPDVGRTPMAIVLYQ*YTCPLQ
Trigger: TTGCAAAGGGCACGTATAGCATTGGTAAAGAACGAT...GGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTCTCCAGCAGGTCTCTaGTCCAATCTTAACTTCAGA +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEESPAGL*SNLNFR
Trigger: TCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACACAAAAGCGTCAATGTTaGAGTCGGGCTTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTQKRQC*SRASPS
Trigger: ACTTGGAGAAGCCCGACTGCAACATTGACGCTTTTG...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTTTTCAGCAGCATTCCTaGAATGTCACAGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGFQQHS*NVTEKL
Trigger: AAGCTTTTCTGTGACATTGCAGGAATGCTGCTGAAA...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTCTGGAACAAACATTTaGAAGTTTTCTAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: MTTHPRLQMSAARPWPSPSGTNI*KFSNPG
Trigger: TCCTGGGTTAGAAAACTTGCAAATGTTTGTTCCAGA...AGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAGATTATCCACCTGCATaGTTCTCAGGGTGTCAACAG +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTDYPPA*FSGCQQ
Trigger: CTGTTGACACCCTGAGAAGCATGCAGGTGGATAATC...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCATTGCTTATCCTGTTaGATAGCTCCAATGCATCAT +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVHCLSC*IAPMHH
Trigger: ATGATGCATTGGAGCTATGCAACAGGATAAGCAATG...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGGTACCCCTGAATCATTaGTTCTCGGTAGTACTGTTG +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQVPLNH*FSVVLL
Trigger: CAACAGTACTACCGAGAAGCAATGATTCAGGGGTAC...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCGGTGGACTATGCCATaGTCATGGAGGACGTTGATC +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLRWTMP*SWRTLI
Trigger: GATCAACGTCCTCCATGAGCATGGCATAGTCCACCG...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGCATGGGCACAGATACTaGAAGCTTAGCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEHGHRY*KLSIAT
Trigger: TGTAGCAATGCTAAGCTTCCAGTATCTGTGCCCATG...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGACTCATTACCTTTGGATaGTCGAGGGGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRLITFG*SRGRDF
Trigger: GAAATCCCTTCCCCTCGACCATCCAAAGGTAATGAG...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCATGCAGTCCCGCGACTaGATGTCGAAGCTGTTATCT +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTMQSRD*MSKLLS
Trigger: AGATAACAGCTTCGACATCCAGTCGCGGGACTGCAT...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTGCCTCTCAAGCTTCTTaGATATGCAGTCCCGCGACT +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSASQAS*ICSPAT
Trigger: AGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGC...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATAATACTCAAGAGAGATaGTTCTCCAGCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNNTQER*FSSRSL
Trigger: CAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATT...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGCAAATCCAAGTGCTTTaGAAGCCCTTTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEQIQVL*KPFLWL
Trigger: AAGCCAGAGAAAGGGCTTCCAAAGCACTTGGATTTG...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCCTCGATCACCGTGCTTaGTCAGAAGCAGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTLDHRA*SEADRH
Trigger: ATGCCTATCTGCTTCTGACCAAGCACGGTGATCGAG...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTCGATCACCGTGCTTaGTCAGAAGCAGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSLDHRA*SEADRH
Trigger: ATGCCTATCTGCTTCTGACCAAGCACGGTGATCGAG...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGTTAGGAGGGTCACTATaGCATCGAGGTACCTTCATA +
Preference number: 4 (lower is better)
Translates to: NTTLMSRFSVARDTEETELGGSL*HRGTFI
Trigger: TATGAAGGTACCTCGATGCCATAGTGACCCTCCTAA...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTTAGGAGGGTCACTATaGCATCGAGGTACCTTCATA +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEELGGSL*HRGTFI
Trigger: TATGAAGGTACCTCGATGCCATAGTGACCCTCCTAA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTTAGGAGGGTCACTATaGCATCGAGGTACCTTCATA +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQLGGSL*HRGTFI
Trigger: TATGAAGGTACCTCGATGCCATAGTGACCCTCCTAA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCGCAATTCAGCAGCTATaGAAGCCAATCGATCATTTT +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVAIQQL*KPIDHF
Trigger: AAAATGATCGATTGGCTTCCATAGCTGCTGAATTGC...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGAATCGGACTGACTTCTaGATAGCTTCTATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEENRTDF*IASMGP
Trigger: AGGACCCATAGAAGCTATCCAGAAGTCAGTCCGATT...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGATCGAATCTCTTTCATaGCCATCAGCTCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKIESLS*PSAPRC
Trigger: ACACCGGGGAGCTGATGGCCATGAAAGAGATTCGAT...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTATCGAATCTCTTTCATaGCCATCAGCTCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSIESLS*PSAPRC
Trigger: ACACCGGGGAGCTGATGGCCATGAAAGAGATTCGAT...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCCTTTAATGTCACGGTaGACTATGCCATGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PLASHHLYDNTPQTPDVGPLMSR*TMPCSW
Trigger: CCATGAGCATGGCATAGTCCACCGTGACATTAAAGG...GCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATTCACCAGGCATGGTCTaGGCATTGTTTTTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHSPGMV*ALFLSF
Trigger: AAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGGTCCATCTCATCTTTaGGTCACTCTCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKGPSHL*VTLKAV
Trigger: CACTGCCTTGAGAGTGACCCAAAGATGAGATGGACC...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCGGTCCATCTCATCTTTaGGTCACTCTCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTGPSHL*VTLKAV
Trigger: CACTGCCTTGAGAGTGACCCAAAGATGAGATGGACC...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAACCTTGACAAACGAATaGTCGAGGAGCTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARTLTNE*SRSWLA
Trigger: CGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGT...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTAGGGGCTGGGCCGACTaGCAGCAACAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLCSNLNFRHSCMTFRRTRGWAD*QQQQQQ
Trigger: CTGCTGCTGCTGTTGCTGCCAGTCGGCCCAGCCCCT...AGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACACCCACATTATTCCTCTaGTGTTTGGTTGACATGCGT +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTPTLFL*CLVDMR
Trigger: ACGCATGTCAACCAAACATCAGAGGAATAATGTGGG...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCCCACATTATTCCTCTaGTGTTTGGTTGACATGCGT +
Preference number: 4 (lower is better)
Translates to: PLASHHLYDNTPQTPDVGPTLFL*CLVDMR
Trigger: ACGCATGTCAACCAAACATCAGAGGAATAATGTGGG...GCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCCCACTGAGTCTAACATaGATGAGCACTGTACATTTT +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIPLSLT*MSTVHF
Trigger: AAAATGTACAGTGCTCATTCATGTTAGACTCAGTGG...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTTTTACCTGCTCAAATaGGACCCTCTGGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLFYLLK*DPLALE
Trigger: CTCCAACGCCAGAGGGTCTCATTTGAGCAGGTAAAA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACCAACTGCACATAATCTaGACCCCACATGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNQLHII*TPHGIW
Trigger: CCAGATCCCATGTGGGGTTCAGATTATGTGCAGTTG...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTACAACTGCACATAATCTaGACCCCACATGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLQLHII*TPHGIW
Trigger: CCAGATCCCATGTGGGGTTCAGATTATGTGCAGTTG...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTGAACCTCCTGCAGCATaGACTGGTAGTACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSEPPAA*TGSTAS
Trigger: TGAAGCAGTACTACCAGTTCATGCTGCAGGAGGTTC...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCTGGGGCTGAAAGCCTaGATTCTGCTGCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLLGLKA*ILLLFP
Trigger: TGGAAATAGCAGCAGAATTCAGGCTTTCAGCCCCAG...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCCTTGACATACTGTTTTaGTTTCAGAACATCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHILDILF*FQNIQE
Trigger: CTCCTGGATGTTCTGAAATCAAAACAGTATGTCAAG...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTGCCCCAGCTGTCCTCTaGATCACGGGCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: GLCSNLNFRHSCMTFRRTAPAVL*ITGSIT
Trigger: GGTGATCGAGCCCGTGATTCAGAGGACAGCTGGGGC...AGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACATGGAAAGCTTTTCTCTaGATTGTGAGATGCGCAGAC +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTWKAFL*IVRCAD
Trigger: GTCTGCGCATCTCACAATTCAGAGAAAAGCTTTCCA...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATCATCAAATTCTGATGTaGACATGTGGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: PRPLASHHLYDNTPQTPDHQILM*TCGPRG
Trigger: ACCGCGTGGACCACATGTTCACATCAGAATTTGATG...ATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTAGAAAATCAAATCCTTaGGTCGCCCACCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSRKSNP*VAHLGL
Trigger: AAGACCCAGGTGGGCGACTCAAGGATTTGATTTTCT...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATTGTGTGGTTTTCCTATaGCATGGCCAATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNCVVFL*HGQCIH
Trigger: ATGAATGCATTGGCCATGTCATAGGAAAACCACACA...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCTCCGTGGGGCTTGAGTaGCGACTCAGGGACCTAAAC +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRSVGLE*RLRDLN
Trigger: GTTTAGGTCCCTGAGTCGTCACTCAAGCCCCACGGA...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCCCCGGTGTCGACGCTaGTGCAGGTGTACACCTTCC +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSPRCRR*CRCTPS
Trigger: GGAAGGTGTACACCTGCATCAGCGTCGACACCGGGG...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCATCGCAGTACTCCATaGAGATGTACATTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHHRSTP*RCTFLL
Trigger: GAGAAGAAATGTACATCTTCATGGAGTACTGCGATG...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
CDS-3UTR TCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGCATCGCAGTACTCCATaGAGATGTACATTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQHRSTP*RCTFLL
Trigger: GAGAAGAAATGTACATCTTCATGGAGTACTGCGATG...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
CDS-3UTR TCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACCTAATCACATGTTCCTaGAGTCCCAGCCTTGACACC +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNLITCS*SPSLDT
Trigger: GGTGTCAAGGCTGGGACTTCAGGAACATGTGATTAG...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCATCTGTGCAAACCTTaGCAAACGAATGGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSHLCKP*QTNGRG
Trigger: TCCTCGACCATTCGTTTGTCAAGGTTTGCACAGATG...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCCATCTGTGCAAACCTTaGCAAACGAATGGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTHLCKP*QTNGRG
Trigger: TCCTCGACCATTCGTTTGTCAAGGTTTGCACAGATG...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGACAGATTCAGGACTCTTaGAAGCTGAATCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRQIQDS*KLNLPM
Trigger: CATTGGGAGATTCAGCTTGCAAGAGTCCTGAATCTG...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGCAGATTCAGGACTCTTaGAAGCTGAATCTCCCAATG +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRQIQDS*KLNLPM
Trigger: CATTGGGAGATTCAGCTTGCAAGAGTCCTGAATCTG...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGCCTAGAAGTCTGGCGTaGAGGTCTGGCTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAPRSLA*RSGYRH
Trigger: ATGCCTATAGCCAGACCTGCACGCCAGACTTCTAGG...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTATTGTCCGTCCTGCATaGCAGGCTTGTAGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLIVRPA*QACSSN
Trigger: GTTAGAGCTACAAGCCTGGCATGCAGGACGGACAAT...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGACCCCATCTGCTTCAGTaGTTTGTCTACAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRPHLLQ*FVYKWS
Trigger: AGACCATTTGTAGACAAAGCACTGAAGCAGATGGGG...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGATACCAATGCTATACGTaGCCTTTGCAAGGAACCATC +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRYQCYT*PLQGTI
Trigger: GATGGTTCCTTGCAAAGGGCACGTATAGCATTGGTA...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCATCGTTCTTTACCAATaGTATACGTGCCCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHIIVLYQ*YTCPLQ
Trigger: TTGCAAAGGGCACGTATAGCATTGGTAAAGAACGAT...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTACCCACGACACAGCACTaGATTTCTCCTCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLPTTQH*ISPQMK
Trigger: CTTCATCTGAGGAGAAATGCAGTGCTGTGTCGTGGG...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGATTATCCACCTGCATaGTTCTCAGGGTGTCAACAG +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKDYPPA*FSGCQQ
Trigger: CTGTTGACACCCTGAGAAGCATGCAGGTGGATAATC...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTTCATTCTTCAGCTGCTaGAAAGCTTTGGCGATGACC +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSSFFSC*KALAMT
Trigger: GGTCATCGCCAAAGCTTTGCAGCAGCTGAAGAATGA...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCGCATCATTCTTCAGCTaGTGCAAAGCTTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTASFFS*CKALAM
Trigger: CATCGCCAAAGCTTTGCAGCAGCTGAAGAATGATGC...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCCGCGGTCAATGGCATTaGTTATCCTGTTGCATAGCT +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTRGQWH*LSCCIA
Trigger: AGCTATGCAACAGGATAAGCAATGCCATTGACCGCG...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGGTACCCCTGAATCATTaGTTCTCGGTAGTACTGTTG +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRVPLNH*FSVVLL
Trigger: CAACAGTACTACCGAGAAGCAATGATTCAGGGGTAC...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGATCTCCTCTTGGATATaGTGGTTCATCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKISSWI*WFISLL
Trigger: GAGGAGCGAGATGAACCAGCATATCCAAGAGGAGAT...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCATTTTGTTTCCTCTTTaGCATTTGAAGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: LMSRFSVARDTEETEAMVILFPL*HLKVTF
Trigger: GAAGGTGACCTTCAAATGGCAAAGAGGAAACAAAAT...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTTTGTGCTCATACTCATaGCAAGGCCTCTTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSLCSYS*QGLLPV
Trigger: GACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAA...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGAGGTTTCACAGTCAGTaGACTCAACAAACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEERFHSQ*TQQTGD
Trigger: ATCTCCTGTTTGTTGAGTGCACTGACTGTGAAACCT...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATAGGTTTCACAGTCAGTaGACTCAACAAACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHRFHSQ*TQQTGD
Trigger: ATCTCCTGTTTGTTGAGTGCACTGACTGTGAAACCT...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGATCTGTCGAGGTGTGCTaGGGGGAGAGGTACCATAAA +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARSVEVC*GERYHK
Trigger: TTTATGGTACCTCTCCCCCCAGCACACCTCGACAGA...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCATGGTCTGTCGAGGTGTGCTaGGGGGAGAGGTACCATAAA +
Preference number: 4 (lower is better)
Translates to: EGLGRELGRQVRMKVNPWSVEVC*GERYHK
Trigger: TTTATGGTACCTCTCCCCCCAGCACACCTCGACAGA...CCATGGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTATTAGACCGACTGGCTaGCCTCCCCACATTATTCCT +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLIRPTG*PPHIIP
Trigger: AGGAATAATGTGGGGAGGCCAGCCAGTCGGTCTAAT...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTATTAGACCGACTGGCTaGCCTCCCCACATTATTCCT +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSIRPTG*PPHIIP
Trigger: AGGAATAATGTGGGGAGGCCAGCCAGTCGGTCTAAT...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATTCCAGTGTCTTTATGTaGAGGCTGATTTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHSSVFM*RLIWCI
Trigger: AATGCACCAAATCAGCCTCCACATAAAGACACTGGA...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTCCAGTGTCTTTATGTaGAGGCTGATTTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQSSVFM*RLIWCI
Trigger: AATGCACCAAATCAGCCTCCACATAAAGACACTGGA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGCATGGGCACAGATACTaGAAGCTTAGCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRHGHRY*KLSIAT
Trigger: TGTAGCAATGCTAAGCTTCCAGTATCTGTGCCCATG...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTCAGTCCTAGAAGTCTaGCGTGCAGGTCTGGCTATA +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLSVLEV*RAGLAI
Trigger: TATAGCCAGACCTGCACGCCAGACTTCTAGGACTGA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCCTCATTACCTTTGGATaGTCGAGGGGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTLITFG*SRGRDF
Trigger: GAAATCCCTTCCCCTCGACCATCCAAAGGTAATGAG...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTATGCAGTCCCGCGACTaGATGTCGAAGCTGTTATCT +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLMQSRD*MSKLLS
Trigger: AGATAACAGCTTCGACATCCAGTCGCGGGACTGCAT...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACATGCAGTCCCGCGACTaGATGTCGAAGCTGTTATCT +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNMQSRD*MSKLLS
Trigger: AGATAACAGCTTCGACATCCAGTCGCGGGACTGCAT...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAATCTGAACCCCACATaGGATCTGGAAATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: AASLTSWPPALQRAFCHINLNPT*DLEIQK
Trigger: TTTCTGAATTTCCAGATCCCATGTGGGGTTCAGATT...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAAATACTCAAGAGAGATaGTTCTCCAGCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRNTQER*FSSRSL
Trigger: CAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATT...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGCAAATCCAAGTGCTTTaGAAGCCCTTTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRQIQVL*KPFLWL
Trigger: AAGCCAGAGAAAGGGCTTCCAAAGCACTTGGATTTG...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTCACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCCTCGATCACCGTGCTTaGTCAGAAGCAGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: LTSCLILKRDGSPAGLCSLDHRA*SEADRH
Trigger: ATGCCTATCTGCTTCTGACCAAGCACGGTGATCGAG...GGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGGGATAATGAGGTGTaGGTTAGGAGGGTCACTATG +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHGDNEV*VRRVTM
Trigger: CATAGTGACCCTCCTAACCCACACCTCATTATCCCC...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ACTATGCCATGCTCATGGAGGACGTTGATCGCAATGGTGATCTGCTTTGAATACCATCTCGCTCCTCCGTaGGGCTTGAGTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: TMPCSWRTLIAMVICFEYHLAPP*GLSDDS
Trigger: TGAGTCGTCACTCAAGCCCCACGGAGGAGCGAGATG...GTATTCAAAGCAGATCACCATTGCGATCAACGTCCTCCATGAGCATGGCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGGCAGTATCTTTACTCTaGCTGATTAGTGTCCGAAGT +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQAVSLL*LISVRS
Trigger: ACTTCGGACACTAATCAGCCAGAGTAAAGATACTGC...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATGCAGTATCTTTACTCTaGCTGATTAGTGTCCGAAGT +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHAVSLL*LISVRS
Trigger: ACTTCGGACACTAATCAGCCAGAGTAAAGATACTGC...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAAATCGGACTGACTTCTaGATAGCTTCTATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTNRTDF*IASMGP
Trigger: AGGACCCATAGAAGCTATCCAGAAGTCAGTCCGATT...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAATCGAATCTCTTTCATaGCCATCAGCTCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLIESLS*PSAPRC
Trigger: ACACCGGGGAGCTGATGGCCATGAAAGAGATTCGAT...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTATCGAATCTCTTTCATaGCCATCAGCTCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSIESLS*PSAPRC
Trigger: ACACCGGGGAGCTGATGGCCATGAAAGAGATTCGAT...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAAACCTTGACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTCCTTTAATGTCACGGTaGACTATGCCATGCTCATGG +
Preference number: 4 (lower is better)
Translates to: ANLDKRMVEELAGGPSHLPLMSR*TMPCSW
Trigger: CCATGAGCATGGCATAGTCCACCGTGACATTAAAGG...AAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACGGTCCATCTCATCTTTaGGTCACTCTCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNGPSHL*VTLKAV
Trigger: CACTGCCTTGAGAGTGACCCAAAGATGAGATGGACC...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACAGTGCTGAATCCCTCTaGAGTGGGGATAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNSAESL*SGDNEV
Trigger: CACCTCATTATCCCCACTCCAGAGGGATTCAGCACT...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACGAACCCCTGGTATCATaGGCACTGCTGATGGATTTG +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNEPLVS*ALLMDL
Trigger: CAAATCCATCAGCAGTGCCCATGATACCAGGGGTTC...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACCATTTTCAGGAACGCTaGAACCCCTGGTATCATGGG +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNHFQER*NPWYHG
Trigger: CCCATGATACCAGGGGTTCCAGCGTTCCTGAAAATG...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGCATGTCTCCCTCCACTaGACGATCGTTCTTTACCAA +
Preference number: 4 (lower is better)
Translates to: QGLLPVTISMTTHPRLQMHVSLH*TIVLYQ
Trigger: TTGGTAAAGAACGATCGTCCAGTGGAGGGAGACATG...CATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp TTTCCTATGACATGGCCAATGCATTCATTCATCAAGGCTTGTAAACTCAAGAAGGCAGCACTCGGGTTCTaGCTCGGTCTCGGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: FPMTWPMHSFIKACKLKKAALGF*LGLGFR
Trigger: CCGGAACCCGAGACCGAGTCAGAACCCGAGTGCTGC...CTTCTTGAGTTTACAAGCCTTGATGAATGAATGCATTGGCCATGTCATAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACCACTGAGTCTAACATaGATGAGCACTGTACATTTT +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRPLSLT*MSTVHF
Trigger: AAAATGTACAGTGCTCATTCATGTTAGACTCAGTGG...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCAAGGCACCACTGAGTCTAACATaGATGAGCACTGTACATTTT +
Preference number: 4 (lower is better)
Translates to: MVEELAGGPSHLWVTLKAPLSLT*MSTVHF
Trigger: AAAATGTACAGTGCTCATTCATGTTAGACTCAGTGG...TGCCTTGAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TCTCTGGCTTCATGGAAGAGCTCCTTCAGGGCTCGACTGATCTCTATAACAGACTTTTACCTGCTCAAATaGGACCCTCTGGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SLASWKSSFRARLISITDFYLLK*DPLALE
Trigger: CTCCAACGCCAGAGGGTCTCATTTGAGCAGGTAAAA...GTCTGTTATAGAGATCAGTCGAGCCCTGAAGGAGCTCTTCCATGAAGCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTATCAGACACTCATGTATaGCATTCAGAAGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLSDTHV*HSEGLG
Trigger: GCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGA...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGAAACTATGCGATGCTTaGGGTAATTGCTGTAGCATT +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEKLCDA*GNCCSI
Trigger: AATGCTACAGCAATTACCTCAAGCATCGCATAGTTT...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACTGGGGCTGAAAGCCTaGATTCTGCTGCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARLGLKA*ILLLFP
Trigger: TGGAAATAGCAGCAGAATTCAGGCTTTCAGCCCCAG...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGCTTGACATACTGTTTTaGTTTCAGAACATCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQLDILF*FQNIQE
Trigger: CTCCTGGATGTTCTGAAATCAAAACAGTATGTCAAG...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGCAGATAGGCATCGATaGGTACGTCATCTGAATCTT +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKADRHR*VRHLNL
Trigger: AAGATTCAGATGACGTACTCATCGATGCCTATCTGC...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GATGACCGGCTGACTGGATGTCTGCTCCTGGCACAGAGTCATAAGTCCCTCAATGCAGATAGGCATCGATaGGTACGTCATCTGAATCTT +
Preference number: 4 (lower is better)
Translates to: DDRLTGCLLLAQSHKSLNADRHR*VRHLNL
Trigger: AAGATTCAGATGACGTACTCATCGATGCCTATCTGC...ATTGAGGGACTTATGACTCTGTGCCAGGAGCAGACATCCAGTCAGCCGGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp TCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTGAGGCACGACTTTaGCAGGCTGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SHPHFIHNLKVVLILMPRPEARL*QAVPPR
Trigger: CCTGGGAGGCACAGCCTGTCAAAGTCGTGCCTCAGG...CCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGAGATGCGCAGACTGCATaGCAACTAGTAAAAGATTAT +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRDAQTA*QLVKDY
Trigger: ATAATCTTTTACTAGTTGTCATGCAGTCTGCGCATC...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGATGCGCAGACTGCATaGCAACTAGTAAAAGATTAT +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNDAQTA*QLVKDY
Trigger: ATAATCTTTTACTAGTTGTCATGCAGTCTGCGCATC...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCAATCTTAACTTCAGACACTGCAAAGCTTTGGCGATaGCCGGCTGACTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: SREMVLQQVSAPILTSDTAKLWR*PADWMS
Trigger: AGACATCCAGTCAGCCGGTCATCGCCAAAGCTTTGC...AGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACAGAAAATCAAATCCTTaGGTCGCCCACCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHRKSNP*VAHLGL
Trigger: AAGACCCAGGTGGGCGACTCAAGGATTTGATTTTCT...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTAGAAAATCAAATCCTTaGGTCGCCCACCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLRKSNP*VAHLGL
Trigger: AAGACCCAGGTGGGCGACTCAAGGATTTGATTTTCT...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCATGTATGCTGCTTGTGTGGTTTTCCTATaGCATGGCCAATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: PWPSPLARVMTSGAMYAACVVFL*HGQCIH
Trigger: ATGAATGCATTGGCCATGTCATAGGAAAACCACACA...AGCAGCATACATGGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTCTTGTGGACCCACTTaGATCTCCTCTTGGATATGC +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLSCGPT*ISSWIC
Trigger: GCATATCCAAGAGGAGATTCAAGTGGGTCCACAAGA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ATACTCATGCCAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGTCTTGTGGACCCACTTaGATCTCCTCTTGGATATGC +
Preference number: 4 (lower is better)
Translates to: ILMPRPLASHHLYDNTPQSCGPT*ISSWIC
Trigger: GCATATCCAAGAGGAGATTCAAGTGGGTCCACAAGA...CTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTGGCATGAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGTATCTTTACTCTGGCTaGTTAGTGTCCGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKYLYSG*LVSEVP
Trigger: GGGAACTTCGGACACTAATCAGCCAGAGTAAAGATA...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAAACCTTGACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTATCTTTACTCTGGCTaGTTAGTGTCCGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: ANLDKRMVEELAGGPSHLYLYSG*LVSEVP
Trigger: GGGAACTTCGGACACTAATCAGCCAGAGTAAAGATA...AAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTTCAAACAATCGGACTaGCTTCTGGATAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEFKQSD*LLDSFY
Trigger: ATAGAAGCTATCCAGAAGTCAGTCCGATTGTTTGAA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATGGCGTATCACAAACTTaGCCAATGATATTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHGVSQT*PMIFFL
Trigger: GAGAAAGAATATCATTGGTCAAGTTTGTGATACGCC...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCCCCGGTGTCGACGCTaGTGCAGGTGTACACCTTCC +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLPRCRR*CRCTPS
Trigger: GGAAGGTGTACACCTGCATCAGCGTCGACACCGGGG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTCCCCGGTGTCGACGCTaGTGCAGGTGTACACCTTCC +
Preference number: 4 (lower is better)
Translates to: PHFIHNLKVVLILMPRPLPRCRR*CRCTPS
Trigger: GGAAGGTGTACACCTGCATCAGCGTCGACACCGGGG...AAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGCCAGATTGGGGTGTTTaGTGCCTTCGAATATTTTCA +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRPDWGV*CLRIFS
Trigger: TGAAAATATTCGAAGGCATCAAACACCCCAATCTGG...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGAATGGTGATCTGCTTTaGATACAGCCTAATCACATG +
Preference number: 4 (lower is better)
Translates to: NTTLMSRFSVARDTEETENGDLL*IQPNHM
Trigger: CATGTGATTAGGCTGTATTCAAAGCAGATCACCATT...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGTTTTTGAGCTTTACTaGACATCCAAAATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: NTTLMSRFSVARDTEETEVFELY*TSKISQ
Trigger: CTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAAC...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCAAGGCAGTTTTTGAGCTTTACTaGACATCCAAAATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: MVEELAGGPSHLWVTLKAVFELY*TSKISQ
Trigger: CTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAAC...TGCCTTGAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTCACTCTCAAGGCAGTaGGAAAGGAAGTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLSLSRQ*ERKSFP
Trigger: AGGAAAGGACTTCCTTTCTCACTGCCTTGAGAGTGA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACTCACTCTCAAGGCAGTaGGAAAGGAAGTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNSLSRQ*ERKSFP
Trigger: AGGAAAGGACTTCCTTTCTCACTGCCTTGAGAGTGA...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCGAGCAGCAGGAGAAGTaGCGCTTGTCACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAEQQEK*RLSPVQ
Trigger: CTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTC...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGATGTTTGGTTGACATaGGTTTCATCTGTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: PRPLASHHLYDNTPQTPDDVWLT*VSSVEV
Trigger: CACCTCGACAGATGAAACGCATGTCAACCAAACATC...ATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTGTTGTTCTAAGAGCTaGTCGGATCTTTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRCCSKS*SDLFLL
Trigger: CAGGAGAAAAAGATCCGAGCAGCTCTTAGAACAACA...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCAAATTGTCCGTCCTGCATaGCAGGCTTGTAGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: HQLLNTQERWFSSRSLLQIVRPA*QACSSN
Trigger: GTTAGAGCTACAAGCCTGGCATGCAGGACGGACAAT...TTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGGGAGTGGCTTTGCACTaGCCTTCTACTGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAGVALH*PSTEVP
Trigger: TGGTACTTCAGTAGAAGGGCAGTGCAAAGCCACTCC...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TCTCTCACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTTCCAGGAGTGGCTTTaGACTGCCCTTCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: SLTSCLILKRDGSPAGLCFQEWL*TALLLK
Trigger: CTTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAA...GCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGATTATCCGTTTTACCTaGTCAAATGAGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRIIRFT*SNETLW
Trigger: CCAGAGGGTCTCATTTGAGCAGGTAAAACGGATAAT...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCATGTATGCTGCTATTATCCGTTTTACCTaGTCAAATGAGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PWPSPLARVMTSGAMYAAIIRFT*SNETLW
Trigger: CCAGAGGGTCTCATTTGAGCAGGTAAAACGGATAAT...AGCAGCATACATGGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAATGTCTACTAAAGCCTaGTTCTGTGCTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLMSTKA*FCAPVW
Trigger: CCAGACTGGAGCACAGAAGCAGGCTTTAGTAGACAT...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGCTATACGTGCCCTTTaGAAGGAACCATCCATTAGC +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHAIRAL*KEPSIS
Trigger: GCTAATGGATGGTTCCTTGCAAAGGGCACGTATAGC...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGCCCACGACACAGCACTaGATTTCTCCTCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAPTTQH*ISPQMK
Trigger: CTTCATCTGAGGAGAAATGCAGTGCTGTGTCGTGGG...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCAACCCACGACACAGCACTaGATTTCTCCTCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: HQLLNTQERWFSSRSLLQPTTQH*ISPQMK
Trigger: CTTCATCTGAGGAGAAATGCAGTGCTGTGTCGTGGG...TTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
CDS-3UTR GCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTACAAAAGCGTCAATGTTaGAGTCGGGCTTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLQKRQC*SRASPS
Trigger: ACTTGGAGAAGCCCGACTGCAACATTGACGCTTTTG...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCAAAAGCGTCAATGTTaGAGTCGGGCTTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSQKRQC*SRASPS
Trigger: ACTTGGAGAAGCCCGACTGCAACATTGACGCTTTTG...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTTTAGCAAATCCAAGTaGTTTGGAAGCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEFSKSK*FGSPFS
Trigger: AGAGAAAGGGCTTCCAAAGCACTTGGATTTGCTAAA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATTTTAGCAAATCCAAGTaGTTTGGAAGCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNFSKSK*FGSPFS
Trigger: AGAGAAAGGGCTTCCAAAGCACTTGGATTTGCTAAA...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTGATTATCCACCTGCATaGTTCTCAGGGTGTCAACAG +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSDYPPA*FSGCQQ
Trigger: CTGTTGACACCCTGAGAAGCATGCAGGTGGATAATC...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTGCATCATTCTTCAGCTaGTGCAAAGCTTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLASFFS*CKALAM
Trigger: CATCGCCAAAGCTTTGCAGCAGCTGAAGAATGATGC...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAGCATCATTCTTCAGCTaGTGCAAAGCTTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLASFFS*CKALAM
Trigger: CATCGCCAAAGCTTTGCAGCAGCTGAAGAATGATGC...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACATTGCTTATCCTGTTaGATAGCTCCAATGCATCAT +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRHCLSC*IAPMHH
Trigger: ATGATGCATTGGAGCTATGCAACAGGATAAGCAATG...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAAACCTTGACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTGTACCCCTGAATCATTaGTTCTCGGTAGTACTGTTG +
Preference number: 4 (lower is better)
Translates to: ANLDKRMVEELAGGPSHLVPLNH*FSVVLL
Trigger: CAACAGTACTACCGAGAAGCAATGATTCAGGGGTAC...AAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCATGGCCATCTCCTCTTGGATATaGTGGTTCATCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RTRQRTRKAGSNEGKSMAISSWI*WFISLL
Trigger: GAGGAGCGAGATGAACCAGCATATCCAAGAGGAGAT...GGCCATGGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGAATCGCAATGGTGATCTaGTTTGAATACAGCCTAATC +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRIAMVI*FEYSLI
Trigger: GATTAGGCTGTATTCAAAGCAGATCACCATTGCGAT...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTAGTAAAAGATTATCCACCTGCATGCTTCTCAGGGTGTCAACAGTCTCCACCTAGGTGCCATGTATGCTaGTGTCCCCAGGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LVKDYPPACFSGCQQSPPRCHVC*CPQGAV
Trigger: AACAGCACCCTGGGGACAGCAGCATACATGGCACCT...AGGTGGAGACTGTTGACACCCTGAGAAGCATGCAGGTGGATAATCTTTTACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCAGGTGCCATGTATGCTaGTGTCCCCAGGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRRCHVC*CPQGAV
Trigger: AACAGCACCCTGGGGACAGCAGCATACATGGCACCT...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTTGTGCTCATACTCATaGCAAGGCCTCTTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRALCSYS*QGLLPV
Trigger: GACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACTCCAGAGGGCCTTTTaGCACATCAGACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARLQRAF*HIRQTG
Trigger: TCCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAG...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTTTGCATTACAAACCTaGAGCTTGCCAACAACAACA +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEFALQT*SLPTTT
Trigger: TGTTGTTGTTGGCAAGCTGCAGGTTTGTAATGCAAA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGATTAGACCGACTGGCTaGCCTCCCCACATTATTCCT +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAIRPTG*PPHIIP
Trigger: AGGAATAATGTGGGGAGGCCAGCCAGTCGGTCTAAT...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTCAGTCCTAGAAGTCTaGCGTGCAGGTCTGGCTATA +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRASVLEV*RAGLAI
Trigger: TATAGCCAGACCTGCACGCCAGACTTCTAGGACTGA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATTTCATTAATAATATCTaGGATGGCTTGACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNFINNI*DGLTGC
Trigger: ACAGCCCGTCAAGCCATCCCAGATATTATTAATGAA...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTCTTTGTTCCAGGAGTaGCTTTGCACTGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLSLFQE*LCTALL
Trigger: TAGAAGGGCAGTGCAAAGCCACTCCTGGAACAAAGA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACCTCATTACCTTTGGATaGTCGAGGGGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHLITFG*SRGRDF
Trigger: GAAATCCCTTCCCCTCGACCATCCAAAGGTAATGAG...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCCCGGCTCATTACCTTTaGATGGTCGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRPAHYL*MVEGKG
Trigger: TCCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGG...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTTCAGAAAACTCCACTaGACGATCGTTCTTTACCAA +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQFRKLH*TIVLYQ
Trigger: TTGGTAAAGAACGATCGTCCAGTGGAGTTTTCTGAA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000544041.5
CDS-3UTR CCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCACCCCACATGGGATCTaGAAATTCAGAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTTPHGI*KFRKLH
Trigger: GTGGAGTTTTCTGAATTTCCAGATCCCATGTGGGGT...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000544041.5
CDS-3UTR CCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTACCCCACATGGGATCTaGAAATTCAGAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSTPHGI*KFRKLH
Trigger: GTGGAGTTTTCTGAATTTCCAGATCCCATGTGGGGT...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000544041.5
CDS-3UTR CCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGAATACTCAAGAGAGATaGTTCTCCAGCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKNTQER*FSSRSL
Trigger: CAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATT...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTGGAAGCCCTTTCTCTaGCTTCATGGAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAWKPFL*LHGRAP
Trigger: AGGAGCTCTTCCATGAAGCCAGAGAAAGGGCTTCCA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTTGTAACAGGACTGTGTaGTTTTCCTATGACATGGCC +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSCNRTV*FSYDMA
Trigger: GGCCATGTCATAGGAAAACCACACAGTCCTGTTACA...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCCTTTAATGTCACGGTaGACTATGCCATGCTCATGG +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLPLMSR*TMPCSW
Trigger: CCATGAGCATGGCATAGTCCACCGTGACATTAAAGG...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GTCTGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTCCCAGTTTGATTTCGGCCGCACGCCCATaGCCCTCTCCTTTGGCACGA +
Preference number: 4 (lower is better)
Translates to: VWALFLSFTEHPKSPSLISAARP*PSPLAR
Trigger: TCGTGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGA...AATCAAACTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAGGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGGAATGGTCGAGGAGCTaGCTGGCGGTCCATCTCATC +
Preference number: 4 (lower is better)
Translates to: AGLCSNLNFRHSCMTFRREWSRS*LAVHLI
Trigger: GATGAGATGGACCGCCAGCCAGCTCCTCGACCATTC...CCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp TCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCAATCTTAACTTCAGACACTACCTTGACAAACGAATaGTCGAGGAGCTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SREMVLQQVSAPILTSDTTLTNE*SRSWLA
Trigger: CGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGT...AGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACAGGAGACAGAGGCGATaGTCCGTGTACAGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHRRQRR*SVYSSN
Trigger: ATTACTACTGTACACGGACCATCGCCTCTGTCTCCT...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TCTCTGGCTTCATGGAAGAGCTCCTTCAGGGCTCGACTGATCTCTATAACAGACAGTGCTGAATCCCTCTaGAGTGGGGATAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: SLASWKSSFRARLISITDSAESL*SGDNEV
Trigger: CACCTCATTATCCCCACTCCAGAGGGATTCAGCACT...GTCTGTTATAGAGATCAGTCGAGCCCTGAAGGAGCTCTTCCATGAAGCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAGAACCCCTGGTATCATaGGCACTGCTGATGGATTTG +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRAREPLVS*ALLMDL
Trigger: CAAATCCATCAGCAGTGCCCATGATACCAGGGGTTC...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR CAA 72 bp ATGTGGTCCACGCGGTCAATGGCATTGCTTATCCTGTaGCATAGCTCCAATGCATCATTCTTCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MWSTRSMALLIL*HSSNASFFSCC
Trigger: GCAGCAGCTGAAGAATGATGCATTGGAGCTATGCAACAGGATAAGCAATGCCATTGACCGCGTGGACCACAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTACCCACATTATTCCTCTaGTGTTTGGTTGACATGCGT +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLPTLFL*CLVDMR
Trigger: ACGCATGTCAACCAAACATCAGAGGAATAATGTGGG...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGATCTTTATGTGGAGGCTaGTTTGGTGCATTCATTTTT +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRSLCGG*FGAFIF
Trigger: AAAAATGAATGCACCAAATCAGCCTCCACATAAAGA...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGATGCTCATGATGTGTTaGGTAACCTACAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEMLMMC*VTYNLC
Trigger: ACAAAGATTGTAGGTTACTCAACACATCATGAGCAT...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGCTGAAGAGCCTGCAATaGTGGATAAAGTGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: QGLLPVTISMTTHPRLQMLKSLQ*WIKCFY
Trigger: ATAGAAGCACTTTATCCATCATTGCAGGCTCTTCAG...CATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCCCTTCAGGACCTCCTTACACTCTCTCACCAGCTGCTTAATACTCAAGAGAGATCAGACACTCATGTATaGCATTCAGAAGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: ALQDLLTLSHQLLNTQERSDTHV*HSEGLG
Trigger: GCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGA...TCTCTCTTGAGTATTAAGCAGCTGGTGAGAGAGTGTAAGGAGGTCCTGAAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
CDS-3UTR TCA 90 bp TTCAGAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCCTGGGGCTGAAAGCCTaGATTCTGCTGCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: FRRTRQRTRKAGSNEGKSLGLKA*ILLLFP
Trigger: TGGAAATAGCAGCAGAATTCAGGCTTTCAGCCCCAG...GGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAGGAATTTGCACCTTaGCATACTGTTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRQEFAP*HTVLIS
Trigger: TGAAATCAAAACAGTATGTCAAGGTGCAAATTCCTG...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGTCAACAGTCTCCACCTaGGGCACGACTTTGACAGGC +
Preference number: 4 (lower is better)
Translates to: AGLCSNLNFRHSCMTFRRSTVST*GTTLTG
Trigger: GCCTGTCAAAGTCGTGCCTCAGGTGGAGACTGTTGA...CCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTACTCAGCATCAAATTCTaGTGTGAACATGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLLSIKF*CEHVVH
Trigger: GTGGACCACATGTTCACATCAGAATTTGATGCTGAG...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACTATCTTTACTCTGGCTaGTTAGTGTCCGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHYLYSG*LVSEVP
Trigger: GGGAACTTCGGACACTAATCAGCCAGAGTAAAGATA...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGATTCCTCTTTGCCATTTaGAGGTCACCTTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARFLFAI*RSPSSS
Trigger: GCTTGAGGAAGGTGACCTTCAAATGGCAAAGAGGAA...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATCCCCGGTGTCGACGCTaGTGCAGGTGTACACCTTCC +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYPRCRR*CRCTPS
Trigger: GGAAGGTGTACACCTGCATCAGCGTCGACACCGGGG...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGTTTTTGAGCTTTACTaGACATCCAAAATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRVFELY*TSKISQ
Trigger: CTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAAC...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACATCTGTGCAAACCTTaGCAAACGAATGGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARHLCKP*QTNGRG
Trigger: TCCTCGACCATTCGTTTGTCAAGGTTTGCACAGATG...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGGGTGCTGTTCACTTCACCAGGCATGGTCTGGGCATTGTTTTTGAGCTTTACTGTCAAAACACTACGCTaGTGTCACGGTTCTCAGTCG +
Preference number: 4 (lower is better)
Translates to: RVLFTSPGMVWALFLSFTVKTLR*CHGSQS
Trigger: CGACTGAGAACCGTGACATCAGCGTAGTGTTTTGAC...AGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGAAGTGAACAGCACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACAGGCTTCTCTCATCCGTaGACGGAGCCCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTGFSHP*TEPRMA
Trigger: GGCCATGCGGGGCTCCGTGCACGGATGAGAGAAGCC...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGGTCCTGGAAGTCTTTTaGAGCATATTTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQVLEVF*SIFFIV
Trigger: GACTATGAAAAATATGCTGCAAAAGACTTCCAGGAC...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACCCCCATCTGCTTCAGTaGTTTGTCTACAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHPHLLQ*FVYKWS
Trigger: AGACCATTTGTAGACAAAGCACTGAAGCAGATGGGG...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAGCTATACGTGCCCTTTaGAAGGAACCATCCATTAGC +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARAIRAL*KEPSIS
Trigger: GCTAATGGATGGTTCCTTGCAAAGGGCACGTATAGC...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACTACCAATGCTATACGTaGCCTTTGCAAGGAACCATC +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNYQCYT*PLQGTI
Trigger: GATGGTTCCTTGCAAAGGGCACGTATAGCATTGGTA...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAATCGTTCTTTACCAATaGTATACGTGCCCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRIVLYQ*YTCPLQ
Trigger: TTGCAAAGGGCACGTATAGCATTGGTAAAGAACGAT...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTTAGCAAATCCAAGTaGTTTGGAAGCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRFSKSK*FGSPFS
Trigger: AGAGAAAGGGCTTCCAAAGCACTTGGATTTGCTAAA...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGGCCGCCCTTCAGGACCTCCTTACACTCTCTCACCAGCTGCTTAATACTCAAGAAGCCTGAATTCTGCTaGTATTTCCAGGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RPPFRTSLHSLTSCLILKKPEFC*YFQVLS
Trigger: AGAAAGGACCTGGAAATAGCAGCAGAATTCAGGCTT...CTTGAGTATTAAGCAGCTGGTGAGAGAGTGTAAGGAGGTCCTGAAGGGCGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTCTGGAACAAACATTTaGAAGTTTTCTAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: GQNTTLMSRFSVARDTEESGTNI*KFSNPG
Trigger: TCCTGGGTTAGAAAACTTGCAAATGTTTGTTCCAGA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGGATTATCCACCTGCATaGTTCTCAGGGTGTCAACAG +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRADYPPA*FSGCQQ
Trigger: CTGTTGACACCCTGAGAAGCATGCAGGTGGATAATC...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TCTCTCACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCGATTATCCACCTGCATaGTTCTCAGGGTGTCAACAG +
Preference number: 4 (lower is better)
Translates to: SLTSCLILKRDGSPAGLCDYPPA*FSGCQQ
Trigger: CTGTTGACACCCTGAGAAGCATGCAGGTGGATAATC...GCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp CAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGAAAAGATTATCCACCTaGATGCTTCTCAGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QGLLPVTISMTTHPRLQMKRLST*MLLRVS
Trigger: TGACACCCTGAGAAGCATGCAGGTGGATAATCTTTT...CATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGACATTGCTTATCCTGTTaGATAGCTCCAATGCATCAT +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRHCLSC*IAPMHH
Trigger: ATGATGCATTGGAGCTATGCAACAGGATAAGCAATG...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCCATTGCTTATCCTGTTaGATAGCTCCAATGCATCAT +
Preference number: 4 (lower is better)
Translates to: TNEWSRSWLAVHLIFGSLHCLSC*IAPMHH
Trigger: ATGATGCATTGGAGCTATGCAACAGGATAAGCAATG...GAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTCAGGGACCTAAACTaGAATTCAGCAGCTATGGAA +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSLRDLN*NSAAME
Trigger: TTCCATAGCTGCTGAATTGCAGTTTAGGTCCCTGAG...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTACTCAGGGACCTAAACTaGAATTCAGCAGCTATGGAA +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLLRDLN*NSAAME
Trigger: TTCCATAGCTGCTGAATTGCAGTTTAGGTCCCTGAG...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATATTTTGTTTCCTCTTTaGCATTTGAAGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNILFPL*HLKVTF
Trigger: GAAGGTGACCTTCAAATGGCAAAGAGGAAACAAAAT...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAATCGCAATGGTGATCTaGTTTGAATACAGCCTAATC +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRIAMVI*FEYSLI
Trigger: GATTAGGCTGTATTCAAAGCAGATCACCATTGCGAT...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CAAGGCAGTGAGAAAGGAAGTCCTTTCCTTCAGGGCTTAATCTTTCAGGGATTGTGTCACGGTGGACTATaGCATGCTCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: QGSEKGSPFLQGLIFQGLCHGGL*HAHGGR
Trigger: ACGTCCTCCATGAGCATGGCATAGTCCACCGTGACA...CAATCCCTGAAAGATTAAGCCCTGAAGGAAAGGACTTCCTTTCTCACTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCAATCTTAACTTCAGACACTCAGAAAACTGTGACCTaGAAGCCCCATCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SREMVLQQVSAPILTSDTQKTVT*KPHPCF
Trigger: GAAGCAGGGATGGGGCTTGCAGGTCACAGTTTTCTG...AGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTATTCCTCTGATGTTTaGTTGACATGCGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQYSSDV*LTCVSS
Trigger: AGATGAAACGCATGTCAACCAAACATCAGAGGAATA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGATATTCCTCTGATGTTTaGTTGACATGCGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRYSSDV*LTCVSS
Trigger: AGATGAAACGCATGTCAACCAAACATCAGAGGAATA...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTACATGGGCACAGATACTaGAAGCTTAGCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLHGHRY*KLSIAT
Trigger: TGTAGCAATGCTAAGCTTCCAGTATCTGTGCCCATG...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCATGGGCACAGATACTaGAAGCTTAGCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSHGHRY*KLSIAT
Trigger: TGTAGCAATGCTAAGCTTCCAGTATCTGTGCCCATG...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACATTCATTAATAATATCTaGGATGGCTTGACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTFINNI*DGLTGC
Trigger: ACAGCCCGTCAAGCCATCCCAGATATTATTAATGAA...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGATCTTTGTTCCAGGAGTaGCTTTGCACTGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARSLFQE*LCTALL
Trigger: TAGAAGGGCAGTGCAAAGCCACTCCTGGAACAAAGA...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGATTCAGAAAACTCCACTaGACGATCGTTCTTTACCAA +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRFRKLH*TIVLYQ
Trigger: TTGGTAAAGAACGATCGTCCAGTGGAGTTTTCTGAA...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000544041.5
CDS-3UTR CCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTCAGAAAACTCCACTaGACGATCGTTCTTTACCAA +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRFRKLH*TIVLYQ
Trigger: TTGGTAAAGAACGATCGTCCAGTGGAGTTTTCTGAA...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000544041.5
CDS-3UTR CCA 90 bp CCATGGCCCTCTCCTTTGGCACGAGTGATGACTTCAGGTGCCATGTATGCTGCTTTCAGAAAACTCCACTaGACGATCGTTCTTTACCAA +
Preference number: 4 (lower is better)
Translates to: PWPSPLARVMTSGAMYAAFRKLH*TIVLYQ
Trigger: TTGGTAAAGAACGATCGTCCAGTGGAGTTTTCTGAA...AGCAGCATACATGGCACCTGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACACCCCACATGGGATCTaGAAATTCAGAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNTPHGI*KFRKLH
Trigger: GTGGAGTTTTCTGAATTTCCAGATCCCATGTGGGGT...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000544041.5
CDS-3UTR CCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGAATCTGAACCCCACATaGGATCTGGAAATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRNLNPT*DLEIQK
Trigger: TTTCTGAATTTCCAGATCCCATGTGGGGTTCAGATT...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAAATCTGAACCCCACATaGGATCTGGAAATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTNLNPT*DLEIQK
Trigger: TTTCTGAATTTCCAGATCCCATGTGGGGTTCAGATT...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTAATACTCAAGAGAGATaGTTCTCCAGCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLNTQER*FSSRSL
Trigger: CAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATT...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACACTCAGCAAGAGTGTCTaGAACAAACATTTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTLSKSV*NKHLQV
Trigger: AACTTGCAAATGTTTGTTCCAGACACTCTTGCTGAG...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAGGTTTTCCTATGACATaGCCAATGCATTCATTCATC +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTGFPMT*PMHSFI
Trigger: GATGAATGAATGCATTGGCCATGTCATAGGAAAACC...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACTGTAACAGGACTGTGTaGTTTTCCTATGACATGGCC +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHCNRTV*FSYDMA
Trigger: GGCCATGTCATAGGAAAACCACACAGTCCTGTTACA...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCATCTCGCTCCTCCGTaGGGCTTGAGTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSHLAPP*GLSDDS
Trigger: TGAGTCGTCACTCAAGCCCCACGGAGGAGCGAGATG...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAAATCGGACTGACTTCTaGATAGCTTCTATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLNRTDF*IASMGP
Trigger: AGGACCCATAGAAGCTATCCAGAAGTCAGTCCGATT...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ATGACATTCAGAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTATCGAATCTCTTTCATaGCCATCAGCTCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: MTFRRTRQRTRKAGSNEGIESLS*PSAPRC
Trigger: ACACCGGGGAGCTGATGGCCATGAAAGAGATTCGAT...ACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTCTGAATGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTCACCAGGCATGGTCTaGGCATTGTTTTTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLSPGMV*ALFLSF
Trigger: AAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACTCACCAGGCATGGTCTaGGCATTGTTTTTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHSPGMV*ALFLSF
Trigger: AAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTGCAGTCTTCAGTCTTaGAAGGTTAAAAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQCSLQS*KVKKAY
Trigger: ATAAGCCTTTTTAACCTTCCAAGACTGAAGACTGCA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGTGCAGTCTTCAGTCTTaGAAGGTTAAAAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: NTTLMSRFSVARDTEETECSLQS*KVKKAY
Trigger: ATAAGCCTTTTTAACCTTCCAAGACTGAAGACTGCA...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR CAA 72 bp GTGTCCGAAGTTCCCAACTTCTTCTTGTGGACCCACTaGAATCTCCTCTTGGATATGCTGGTTCATCTCGCT +
Preference number: 4 (lower is better)
Translates to: VSEVPNFFLWTH*NLLLDMLVHLA
Trigger: AGCGAGATGAACCAGCATATCCAAGAGGAGATTCAAGTGGGTCCACAAGAAGAAGTTGGGAACTTCGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CAA 72 bp ATGTCACGGTGGACTATGCCATGCTCATGGAGGACGTaGATCGCAATGGTGATCTGCTTTGAATACAGCCTA +
Preference number: 4 (lower is better)
Translates to: MSRWTMPCSWRT*IAMVICFEYSL
Trigger: TAGGCTGTATTCAAAGCAGATCACCATTGCGATCAACGTCCTCCATGAGCATGGCATAGTCCACCGTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCGCAGCACTCGGGTTCTaGCTCGGTCTCGGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSAALGF*LGLGFR
Trigger: CCGGAACCCGAGACCGAGTCAGAACCCGAGTGCTGC...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR TCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACCCACATTATTCCTCTaGTGTTTGGTTGACATGCGT +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARPTLFL*CLVDMR
Trigger: ACGCATGTCAACCAAACATCAGAGGAATAATGTGGG...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCCACTGAGTCTAACATaGATGAGCACTGTACATTTT +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSPLSLT*MSTVHF
Trigger: AAAATGTACAGTGCTCATTCATGTTAGACTCAGTGG...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACCTGAAGAGCCTGCAATaGTGGATAAAGTGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNLKSLQ*WIKCFY
Trigger: ATAGAAGCACTTTATCCATCATTGCAGGCTCTTCAG...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCAAACTATGCGATGCTTaGGGTAATTGCTGTAGCATT +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTKLCDA*GNCCSI
Trigger: AATGCTACAGCAATTACCTCAAGCATCGCATAGTTT...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTAAACTATGCGATGCTTaGGGTAATTGCTGTAGCATT +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSKLCDA*GNCCSI
Trigger: AATGCTACAGCAATTACCTCAAGCATCGCATAGTTT...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTGGAAAGCTTTTCTCTaGATTGTGAGATGCGCAGAC +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAWKAFL*IVRCAD
Trigger: GTCTGCGCATCTCACAATTCAGAGAAAAGCTTTCCA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATTTGGCGATGACCGGCTaGCTGGATGTCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYLAMTG*LDVCSW
Trigger: CCAGGAGCAGACATCCAGTCAGCCGGTCATCGCCAA...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ATGACATTCAGAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTCATCAAATTCTGATGTaGACATGTGGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: MTFRRTRQRTRKAGSNEGHQILM*TCGPRG
Trigger: ACCGCGTGGACCACATGTTCACATCAGAATTTGATG...ACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTCTGAATGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACTCAGCATCAAATTCTaGTGTGAACATGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARLSIKF*CEHVVH
Trigger: GTGGACCACATGTTCACATCAGAATTTGATGCTGAG...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACTGTGTGGTTTTCCTATaGCATGGCCAATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNCVVFL*HGQCIH
Trigger: ATGAATGCATTGGCCATGTCATAGGAAAACCACACA...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCAATTCTTGTGGACCCACTTaGATCTCCTCTTGGATATGC +
Preference number: 4 (lower is better)
Translates to: TSCLILKRDGSPAGLCSNSCGPT*ISSWIC
Trigger: GCATATCCAAGAGGAGATTCAAGTGGGTCCACAAGA...ATTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTATCTTTACTCTGGCTaGTTAGTGTCCGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAYLYSG*LVSEVP
Trigger: GGGAACTTCGGACACTAATCAGCCAGAGTAAAGATA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGGGCGTATCACAAACTTaGCCAATGATATTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QGLLPVTISMTTHPRLQMGVSQT*PMIFFL
Trigger: GAGAAAGAATATCATTGGTCAAGTTTGTGATACGCC...CATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCATGGCCCCAGATTGGGGTGTTTaGTGCCTTCGAATATTTTCA +
Preference number: 4 (lower is better)
Translates to: RTRQRTRKAGSNEGKSMAPDWGV*CLRIFS
Trigger: TGAAAATATTCGAAGGCATCAAACACCCCAATCTGG...GGCCATGGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTAATGGTGATCTGCTTTaGATACAGCCTAATCACATG +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSNGDLL*IQPNHM
Trigger: CATGTGATTAGGCTGTATTCAAAGCAGATCACCATT...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTGAGCAGCAGGAGAAGTaGCGCTTGTCACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVEQQEK*RLSPVQ
Trigger: CTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTC...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTGTTGTTCTAAGAGCTaGTCGGATCTTTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLCCSKS*SDLFLL
Trigger: CAGGAGAAAAAGATCCGAGCAGCTCTTAGAACAACA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ACTATGCCATGCTCATGGAGGACGTTGATCGCAATGGTGATCTGCTTTGAATACGGAGTGGCTTTGCACTaGCCTTCTACTGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: TMPCSWRTLIAMVICFEYGVALH*PSTEVP
Trigger: TGGTACTTCAGTAGAAGGGCAGTGCAAAGCCACTCC...GTATTCAAAGCAGATCACCATTGCGATCAACGTCCTCCATGAGCATGGCATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGCACAAACAGAGTGCCTaGACCCTGTCCTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: AGLCSNLNFRHSCMTFRRHKQSA*TLSWKS
Trigger: AGACTTCCAGGACAGGGTGCAGGCACTCTGTTTGTG...CCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACCCCATCTGCTTCAGTaGTTTGTCTACAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARPHLLQ*FVYKWS
Trigger: AGACCATTTGTAGACAAAGCACTGAAGCAGATGGGG...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTCTCCAGCAGGTCTCTaGTCCAATCTTAACTTCAGA +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRASPAGL*SNLNFR
Trigger: TCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGTTTCAGCAGCATTCCTaGAATGTCACAGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKFQQHS*NVTEKL
Trigger: AAGCTTTTCTGTGACATTGCAGGAATGCTGCTGAAA...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAAACCTTGACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTTTAGCAAATCCAAGTaGTTTGGAAGCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ANLDKRMVEELAGGPSHLFSKSK*FGSPFS
Trigger: AGAGAAAGGGCTTCCAAAGCACTTGGATTTGCTAAA...AAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTAAGCCTGAATTCTGCTaGTATTTCCAGGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLKPEFC*YFQVLS
Trigger: AGAAAGGACCTGGAAATAGCAGCAGAATTCAGGCTT...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAAAGCCTGAATTCTGCTaGTATTTCCAGGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLKPEFC*YFQVLS
Trigger: AGAAAGGACCTGGAAATAGCAGCAGAATTCAGGCTT...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACAAGCCTGAATTCTGCTaGTATTTCCAGGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNKPEFC*YFQVLS
Trigger: AGAAAGGACCTGGAAATAGCAGCAGAATTCAGGCTT...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGATCTAACCCAGGAATTTaGACCTTGACATACTGTTTT +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRSNPGI*TLTYCF
Trigger: AAAACAGTATGTCAAGGTGCAAATTCCTGGGTTAGA...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTCTAACCCAGGAATTTaGACCTTGACATACTGTTTT +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRSNPGI*TLTYCF
Trigger: AAAACAGTATGTCAAGGTGCAAATTCCTGGGTTAGA...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACATCTAACCCAGGAATTTaGACCTTGACATACTGTTTT +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTSNPGI*TLTYCF
Trigger: AAAACAGTATGTCAAGGTGCAAATTCCTGGGTTAGA...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACATCTGGAACAAACATTTaGAAGTTTTCTAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTSGTNI*KFSNPG
Trigger: TCCTGGGTTAGAAAACTTGCAAATGTTTGTTCCAGA...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAGCTGCATTGAGTAACTaGAAAATAATACTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTAALSN*KIILFS
Trigger: GGAGAAGAGTATTATTTTGCAGTTACTCAATGCAGC...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCGCTGCATTGAGTAACTaGAAAATAATACTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TNEWSRSWLAVHLIFGSLAALSN*KIILFS
Trigger: GGAGAAGAGTATTATTTTGCAGTTACTCAATGCAGC...GAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GATGCCTTCGAATATTTTCAATTCGTCTGCAGTTTCCTTGATAGTCTTATGGTCGCTGTGCCTCCCAGGTaGCCCAGCTGTCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: DAFEYFQFVCSFLDSLMVAVPPR*PSCPLN
Trigger: ATTCAGAGGACAGCTGGGGCACCTGGGAGGCACAGC...GACCATAAGACTATCAAGGAAACTGCAGACGAATTGAAAATATTCGAAGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGCTCAGGGACCTAAACTaGAATTCAGCAGCTATGGAA +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRALRDLN*NSAAME
Trigger: TTCCATAGCTGCTGAATTGCAGTTTAGGTCCCTGAG...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGATTTTGTTTCCTCTTTaGCATTTGAAGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRILFPL*HLKVTF
Trigger: GAAGGTGACCTTCAAATGGCAAAGAGGAAACAAAAT...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAATTTTGTTTCCTCTTTaGCATTTGAAGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRILFPL*HLKVTF
Trigger: GAAGGTGACCTTCAAATGGCAAAGAGGAAACAAAAT...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCATCGCAATGGTGATCTaGTTTGAATACAGCCTAATC +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTIAMVI*FEYSLI
Trigger: GATTAGGCTGTATTCAAAGCAGATCACCATTGCGAT...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTATCGCAATGGTGATCTaGTTTGAATACAGCCTAATC +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSIAMVI*FEYSLI
Trigger: GATTAGGCTGTATTCAAAGCAGATCACCATTGCGAT...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGATCGCAATGGTGATCTaGTTTGAATACAGCCTAATC +
Preference number: 4 (lower is better)
Translates to: QGLLPVTISMTTHPRLQMIAMVI*FEYSLI
Trigger: GATTAGGCTGTATTCAAAGCAGATCACCATTGCGAT...CATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTTTCAGGTGCCATGTATaGTGCTGTCCCCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSFRCHV*CCPQGA
Trigger: AGCACCCTGGGGACAGCAGCATACATGGCACCTGAA...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACAGGTTTCACAGTCAGTaGACTCAACAAACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHRFHSQ*TQQTGD
Trigger: ATCTCCTGTTTGTTGAGTGCACTGACTGTGAAACCT...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTTCATTAATAATATCTaGGATGGCTTGACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTFINNI*DGLTGC
Trigger: ACAGCCCGTCAAGCCATCCCAGATATTATTAATGAA...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGTTCATTAATAATATCTaGGATGGCTTGACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKFINNI*DGLTGC
Trigger: ACAGCCCGTCAAGCCATCCCAGATATTATTAATGAA...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTTCATTAATAATATCTaGGATGGCTTGACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QGLLPVTISMTTHPRLQMFINNI*DGLTGC
Trigger: ACAGCCCGTCAAGCCATCCCAGATATTATTAATGAA...CATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTAGTAAAAGATTATCCACCTGCATGCTTCTCAGGGTGTCAACAGTCTCCACCTTGGAAGCCCTTTCTCTaGCTTCATGGAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LVKDYPPACFSGCQQSPPWKPFL*LHGRAP
Trigger: AGGAGCTCTTCCATGAAGCCAGAGAAAGGGCTTCCA...AGGTGGAGACTGTTGACACCCTGAGAAGCATGCAGGTGGATAATCTTTTACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGCTCAGCAAGAGTGTCTaGAACAAACATTTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKLSKSV*NKHLQV
Trigger: AACTTGCAAATGTTTGTTCCAGACACTCTTGCTGAG...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGCTCAGCAAGAGTGTCTaGAACAAACATTTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: QGLLPVTISMTTHPRLQMLSKSV*NKHLQV
Trigger: AACTTGCAAATGTTTGTTCCAGACACTCTTGCTGAG...CATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCCTGGATGTCTGCTCCTaGCACAGAGTCATAAGTCCC +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDALDVCS*HRVISP
Trigger: GGGACTTATGACTCTGTGCCAGGAGCAGACATCCAG...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCGGTCCACGCGGTCAATaGCATTGCTTATCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAGPRGQ*HCLSCC
Trigger: GCAACAGGATAAGCAATGCCATTGACCGCGTGGACC...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTAGTAAAAGATTATCCACCTGCATGCTTCTCAGGGTGTCAACAGTCTCCACCTTCTGATGTGAACATGTaGTCCACGCGGTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: LVKDYPPACFSGCQQSPPSDVNM*STRSMA
Trigger: TGCCATTGACCGCGTGGACCACATGTTCACATCAGA...AGGTGGAGACTGTTGACACCCTGAGAAGCATGCAGGTGGATAATCTTTTACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCGGTTTTCCTATGACATaGCCAATGCATTCATTCATC +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTGFPMT*PMHSFI
Trigger: GATGAATGAATGCATTGGCCATGTCATAGGAAAACC...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTGTAACAGGACTGTGTaGTTTTCCTATGACATGGCC +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRACNRTV*FSYDMA
Trigger: GGCCATGTCATAGGAAAACCACACAGTCCTGTTACA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCATCTCGCTCCTCCGTaGGGCTTGAGTGACGACTCA +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLHLAPP*GLSDDS
Trigger: TGAGTCGTCACTCAAGCCCCACGGAGGAGCGAGATG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTGCAGTATCTTTACTCTaGCTGATTAGTGTCCGAAGT +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSAVSLL*LISVRS
Trigger: ACTTCGGACACTAATCAGCCAGAGTAAAGATACTGC...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAGCAGTATCTTTACTCTaGCTGATTAGTGTCCGAAGT +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLAVSLL*LISVRS
Trigger: ACTTCGGACACTAATCAGCCAGAGTAAAGATACTGC...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCATCGAATCTCTTTCATaGCCATCAGCTCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRIESLS*PSAPRC
Trigger: ACACCGGGGAGCTGATGGCCATGAAAGAGATTCGAT...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTCACCAGGCATGGTCTaGGCATTGTTTTTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRASPGMV*ALFLSF
Trigger: AAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCTCAGCAAGAGTGTCTGGAACAAACATTTGCAAGTTTTCTAACCCAGGAATTTGGTCGAGGAGCTGGCTaGCGGTCCATCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: PQQECLEQTFASFLTQEFGRGAG*RSISSL
Trigger: CAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACC...AAATTCCTGGGTTAGAAAACTTGCAAATGTTTGTTCCAGACACTCTTGCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGATGCAGTCTTCAGTCTTaGAAGGTTAAAAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: KHYADVTVLSRARHGGDRCSLQS*KVKKAY
Trigger: ATAAGCCTTTTTAACCTTCCAAGACTGAAGACTGCA...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTAGGACTCTTGCAAGCTaGATCTCCCAATGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GLCSNLNFRHSCMTFRRTRTLAS*ISQCAL
Trigger: GAGGGCACATTGGGAGATTCAGCTTGCAAGAGTCCT...AGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTCTTTATGTGGAGGCTaGTTTGGTGCATTCATTTTT +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTSLCGG*FGAFIF
Trigger: AAAAATGAATGCACCAAATCAGCCTCCACATAAAGA...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGATATCTGGGATGGCTTaGCGGGCTGTATATAAAAAG +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAISGMA*RAVYKK
Trigger: CTTTTTATATACAGCCCGTCAAGCCATCCCAGATAT...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAATATCTGGGATGGCTTaGCGGGCTGTATATAAAAAG +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARISGMA*RAVYKK
Trigger: CTTTTTATATACAGCCCGTCAAGCCATCCCAGATAT...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCCAACTGCACATAATCTaGACCCCACATGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAQLHII*TPHGIW
Trigger: CCAGATCCCATGTGGGGTTCAGATTATGTGCAGTTG...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCGAACCTCCTGCAGCATaGACTGGTAGTACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAEPPAA*TGSTAS
Trigger: TGAAGCAGTACTACCAGTTCATGCTGCAGGAGGTTC...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTAAACTATGCGATGCTTaGGGTAATTGCTGTAGCATT +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLKLCDA*GNCCSI
Trigger: AATGCTACAGCAATTACCTCAAGCATCGCATAGTTT...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGCAGGAATTTGCACCTTaGCATACTGTTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: QGLLPVTISMTTHPRLQMQEFAP*HTVLIS
Trigger: TGAAATCAAAACAGTATGTCAAGGTGCAAATTCCTG...CATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACGATGCGCAGACTGCATaGCAACTAGTAAAAGATTAT +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNDAQTA*QLVKDY
Trigger: ATAATCTTTTACTAGTTGTCATGCAGTCTGCGCATC...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTGATGCGCAGACTGCATaGCAACTAGTAAAAGATTAT +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSDAQTA*QLVKDY
Trigger: ATAATCTTTTACTAGTTGTCATGCAGTCTGCGCATC...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGGGTGCTGTTCACTTCACCAGGCATGGTCTGGGCATTGTTTTTGAGCTTTACTTGGAAAGCTTTTCTCTaGATTGTGAGATGCGCAGAC +
Preference number: 4 (lower is better)
Translates to: RVLFTSPGMVWALFLSFTWKAFL*IVRCAD
Trigger: GTCTGCGCATCTCACAATTCAGAGAAAAGCTTTCCA...AGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGAAGTGAACAGCACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCATGGTGTGTGGTTTTCCTATaGCATGGCCAATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: EGLGRELGRQVRMKVNPWCVVFL*HGQCIH
Trigger: ATGAATGCATTGGCCATGTCATAGGAAAACCACACA...CCATGGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACTTCAAACAATCGGACTaGCTTCTGGATAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNFKQSD*LLDSFY
Trigger: ATAGAAGCTATCCAGAAGTCAGTCCGATTGTTTGAA...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACTTCAAACAATCGGACTaGCTTCTGGATAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHFKQSD*LLDSFY
Trigger: ATAGAAGCTATCCAGAAGTCAGTCCGATTGTTTGAA...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGCGTATCACAAACTTaGCCAATGATATTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHGVSQT*PMIFFL
Trigger: GAGAAAGAATATCATTGGTCAAGTTTGTGATACGCC...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCTTCCTCTTTGCCATTTaGAGGTCACCTTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRFLFAI*RSPSSS
Trigger: GCTTGAGGAAGGTGACCTTCAAATGGCAAAGAGGAA...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACATCGCAGTACTCCATaGAGATGTACATTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARHRSTP*RCTFLL
Trigger: GAGAAGAAATGTACATCTTCATGGAGTACTGCGATG...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
CDS-3UTR TCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTAATGGTGATCTGCTTTaGATACAGCCTAATCACATG +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSNGDLL*IQPNHM
Trigger: CATGTGATTAGGCTGTATTCAAAGCAGATCACCATT...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAGTTTTTGAGCTTTACTaGACATCCAAAATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLVFELY*TSKISQ
Trigger: CTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAAC...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ACTATGCCATGCTCATGGAGGACGTTGATCGCAATGGTGATCTGCTTTGAATACCATCTGTGCAAACCTTaGCAAACGAATGGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: TMPCSWRTLIAMVICFEYHLCKP*QTNGRG
Trigger: TCCTCGACCATTCGTTTGTCAAGGTTTGCACAGATG...GTATTCAAAGCAGATCACCATTGCGATCAACGTCCTCCATGAGCATGGCATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATCTGAATCTCCCAATGTaGCCTCTTGCCTCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYLNLPM*PLASPP
Trigger: TGGCGGCGAGGCAAGAGGGCACATTGGGAGATTCAG...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAATTATCCGTTTTACCTaGTCAAATGAGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARIIRFT*SNETLW
Trigger: CCAGAGGGTCTCATTTGAGCAGGTAAAACGGATAAT...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTGTCCTGGAAGTCTTTTaGAGCATATTTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSVLEVF*SIFFIV
Trigger: GACTATGAAAAATATGCTGCAAAAGACTTCCAGGAC...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCATGTCTACTAAAGCCTaGTTCTGTGCTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRMSTKA*FCAPVW
Trigger: CCAGACTGGAGCACAGAAGCAGGCTTTAGTAGACAT...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAATCGTTCTTTACCAATaGTATACGTGCCCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLIVLYQ*YTCPLQ
Trigger: TTGCAAAGGGCACGTATAGCATTGGTAAAGAACGAT...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ATGACATTCAGAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTTCTCCAGCAGGTCTCTaGTCCAATCTTAACTTCAGA +
Preference number: 4 (lower is better)
Translates to: MTFRRTRQRTRKAGSNEGSPAGL*SNLNFR
Trigger: TCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGA...ACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTCTGAATGTCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
CDS-3UTR GCA 90 bp CAAGGCAGTGAGAAAGGAAGTCCTTTCCTTCAGGGCTTAATCTTTCAGGGATTGCAAAAGCGTCAATGTTaGAGTCGGGCTTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: QGSEKGSPFLQGLIFQGLQKRQC*SRASPS
Trigger: ACTTGGAGAAGCCCGACTGCAACATTGACGCTTTTG...CAATCCCTGAAAGATTAAGCCCTGAAGGAAAGGACTTCCTTTCTCACTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTAAGCTTCCCGGCCTGTaGTTCTCCTCCCCGTATGTA +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLKLPGL*FSSPYV
Trigger: TACATACGGGGAGGAGAAGCACAGGCCGGGAAGCTT...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTCGGCAGAGAACTAAGCTTCCCGGCCTGTaGTTCTCCTCCCCGTATGTA +
Preference number: 4 (lower is better)
Translates to: NLNFRHSCMTFRRTRQRTKLPGL*FSSPYV
Trigger: TACATACGGGGAGGAGAAGCACAGGCCGGGAAGCTT...AGTTCTCTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACTTTCAGCAGCATTCCTaGAATGTCACAGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNFQQHS*NVTEKL
Trigger: AAGCTTTTCTGTGACATTGCAGGAATGCTGCTGAAA...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGCTGCATTGAGTAACTaGAAAATAATACTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKAALSN*KIILFS
Trigger: GGAGAAGAGTATTATTTTGCAGTTACTCAATGCAGC...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCGCTGTGCCTCCCAGGTaGCCCAGCTGTCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVAVPPR*PSCPLN
Trigger: ATTCAGAGGACAGCTGGGGCACCTGGGAGGCACAGC...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCATGGCCCATTGCTTATCCTGTTaGATAGCTCCAATGCATCAT +
Preference number: 4 (lower is better)
Translates to: RTRQRTRKAGSNEGKSMAHCLSC*IAPMHH
Trigger: ATGATGCATTGGAGCTATGCAACAGGATAAGCAATG...GGCCATGGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTATTTTGTTTCCTCTTTaGCATTTGAAGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSILFPL*HLKVTF
Trigger: GAAGGTGACCTTCAAATGGCAAAGAGGAAACAAAAT...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TCACCAGGCATGGTCTGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTTGTCACGGTGGACTATaGCATGCTCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: SPGMVWALFLSFTEHPKSCHGGL*HAHGGR
Trigger: ACGTCCTCCATGAGCATGGCATAGTCCACCGTGACA...AGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTTCAGGTGCCATGTATaGTGCTGTCCCCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLFRCHV*CCPQGA
Trigger: AGCACCCTGGGGACAGCAGCATACATGGCACCTGAA...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTTTGCATTACAAACCTaGAGCTTGCCAACAACAACA +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLFALQT*SLPTTT
Trigger: TGTTGTTGTTGGCAAGCTGCAGGTTTGTAATGCAAA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCATTAGACCGACTGGCTaGCCTCCCCACATTATTCCT +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAIRPTG*PPHIIP
Trigger: AGGAATAATGTGGGGAGGCCAGCCAGTCGGTCTAAT...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTATAAAAAGAAGTCCTaGTCGTTAATTGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTYKKKS*SLIVRP
Trigger: AGGACGGACAATTAACGACCAGGACTTCTTTTTATA...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCCGGCTCATTACCTTTaGATGGTCGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLPAHYL*MVEGKG
Trigger: TCCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCGGCTCATTACCTTTaGATGGTCGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SHPHFIHNLKVVLILMPRPAHYL*MVEGKG
Trigger: TCCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGG...CCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTTTCTGTGCTCCAGTCTaGTGCTCCCCAGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVFCAPV*CSPAKR
Trigger: TCTCTTGGCTGGGGAGCACCAGACTGGAGCACAGAA...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTTCTGTGCTCCAGTCTaGTGCTCCCCAGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLFCAPV*CSPAKR
Trigger: TCTCTTGGCTGGGGAGCACCAGACTGGAGCACAGAA...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTAATCTGAACCCCACATaGGATCTGGAAATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSNLNPT*DLEIQK
Trigger: TTTCTGAATTTCCAGATCCCATGTGGGGTTCAGATT...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCTGGAAGCCCTTTCTCTaGCTTCATGGAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAWKPFL*LHGRAP
Trigger: AGGAGCTCTTCCATGAAGCCAGAGAAAGGGCTTCCA...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTCAGAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCCAAATCCAAGTGCTTTaGAAGCCCTTTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FRRTRQRTRKAGSNEGKSQIQVL*KPFLWL
Trigger: AAGCCAGAGAAAGGGCTTCCAAAGCACTTGGATTTG...GGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCTCAGCAAGAGTGTCTaGAACAAACATTTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLLSKSV*NKHLQV
Trigger: AACTTGCAAATGTTTGTTCCAGACACTCTTGCTGAG...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTGGTCCACGCGGTCAATaGCATTGCTTATCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSGPRGQ*HCLSCC
Trigger: GCAACAGGATAAGCAATGCCATTGACCGCGTGGACC...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTGGTTTTCCTATGACATaGCCAATGCATTCATTCATC +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLGFPMT*PMHSFI
Trigger: GATGAATGAATGCATTGGCCATGTCATAGGAAAACC...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGCAATTCAGCAGCTATaGAAGCCAATCGATCATTTT +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHAIQQL*KPIDHF
Trigger: AAAATGATCGATTGGCTTCCATAGCTGCTGAATTGC...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCGGTCCATCTCATCTTTaGGTCACTCTCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAGPSHL*VTLKAV
Trigger: CACTGCCTTGAGAGTGACCCAAAGATGAGATGGACC...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTACCTTGACAAACGAATaGTCGAGGAGCTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVTLTNE*SRSWLA
Trigger: CGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGT...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTTGCAGTCTTCAGTCTTaGAAGGTTAAAAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSCSLQS*KVKKAY
Trigger: ATAAGCCTTTTTAACCTTCCAAGACTGAAGACTGCA...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCAGGAGACAGAGGCGATaGTCCGTGTACAGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRRRQRR*SVYSSN
Trigger: ATTACTACTGTACACGGACCATCGCCTCTGTCTCCT...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCAATCTTAACTTCAGACACTACCCCACATGGGATCTaGAAATTCAGAAAACTCGCC +
Preference number: 4 (lower is better)
Translates to: SREMVLQQVSAPILTSDTTPHGI*KFRKLA
Trigger: GGCGAGTTTTCTGAATTTCCAGATCCCATGTGGGGT...AGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542952.5
3UTR CAA 72 bp AGCATTTTATGTAGATCCTCTTCAAAAGCGTCAATGTaGCAGTCGGGCTTCTCCAAGTCCTCCAGAACCTCC +
Preference number: 4 (lower is better)
Translates to: SILCRSSSKASM*QSGFSKSSRTS
Trigger: GGAGGTTCTGGAGGACTTGGAGAAGCCCGACTGCAACATTGACGCTTTTGAAGAGGATCTACATAAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CAA 72 bp TCTGATGTGAACATGTGGTCCACGCGGTCAATGGCATaGCTTATCCTGTTGCATAGCTCCAATGCATCATTC +
Preference number: 4 (lower is better)
Translates to: SDVNMWSTRSMA*LILLHSSNASF
Trigger: GAATGATGCATTGGAGCTATGCAACAGGATAAGCAATGCCATTGACCGCGTGGACCACATGTTCACATCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
3UTR CAA 72 bp AGGGTGCTGTTCACTTCACCAGGCATGGTCTGGGCATaGTTTTTGAGCTTTACTGAACATCCAAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: RVLFTSPGMVWA*FLSFTEHPKSP
Trigger: GGGAGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGAAGTGAACAGCACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTATGCTCATGATGTGTTaGGTAACCTACAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSMLMMC*VTYNLC
Trigger: ACAAAGATTGTAGGTTACTCAACACATCATGAGCAT...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTATGCTCATGATGTGTTaGGTAACCTACAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLMLMMC*VTYNLC
Trigger: ACAAAGATTGTAGGTTACTCAACACATCATGAGCAT...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTGAACCTCCTGCAGCATaGACTGGTAGTACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSEPPAA*TGSTAS
Trigger: TGAAGCAGTACTACCAGTTCATGCTGCAGGAGGTTC...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACTTGACATACTGTTTTaGTTTCAGAACATCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARLDILF*FQNIQE
Trigger: CTCCTGGATGTTCTGAAATCAAAACAGTATGTCAAG...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCTCCGTGGGGCTTGAGTaGCGACTCAGGGACCTAAAC +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVSVGLE*RLRDLN
Trigger: GTTTAGGTCCCTGAGTCGTCACTCAAGCCCCACGGA...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGGTTTTTGAGCTTTACTaGACATCCAAAATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAVFELY*TSKISQ
Trigger: CTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAAC...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCAGTCACCATCTCTATaGCAACACACCCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVQSPSL*QHTPDS
Trigger: GGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTG...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TCACCAGGCATGGTCTGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTGTCAAAACACTACGCTaGTGTCACGGTTCTCAGTCG +
Preference number: 4 (lower is better)
Translates to: SPGMVWALFLSFTEHPKSVKTLR*CHGSQS
Trigger: CGACTGAGAACCGTGACATCAGCGTAGTGTTTTGAC...AGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CAAGGCAGTGAGAAAGGAAGTCCTTTCCTTCAGGGCTTAATCTTTCAGGGATTGGATGTTTGGTTGACATaGGTTTCATCTGTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: QGSEKGSPFLQGLIFQGLDVWLT*VSSVEV
Trigger: CACCTCGACAGATGAAACGCATGTCAACCAAACATC...CAATCCCTGAAAGATTAAGCCCTGAAGGAAAGGACTTCCTTTCTCACTGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ATTTCTCGGTACCTCTTTTCTTCAAACAATCGGACTGACTTCTGGATAGCTTCTCCTAGAAGTCTGGCGTaGAGGTCTGGCTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: ISRYLFSSNNRTDFWIASPRSLA*RSGYRH
Trigger: ATGCCTATAGCCAGACCTGCACGCCAGACTTCTAGG...AGAAGCTATCCAGAAGTCAGTCCGATTGTTTGAAGAAAAGAGGTACCGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACGTCCTGGAAGTCTTTTaGAGCATATTTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNVLEVF*SIFFIV
Trigger: GACTATGAAAAATATGCTGCAAAAGACTTCCAGGAC...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGTCCTGGAAGTCTTTTaGAGCATATTTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHVLEVF*SIFFIV
Trigger: GACTATGAAAAATATGCTGCAAAAGACTTCCAGGAC...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCAAGCTTCTTGGATATaGAGTCCCGCGACTGGATGT +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSQASWI*SPATGC
Trigger: ACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTG...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CAAGGCAGTGAGAAAGGAAGTCCTTTCCTTCAGGGCTTAATCTTTCAGGGATTGCCCCATCTGCTTCAGTaGTTTGTCTACAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: QGSEKGSPFLQGLIFQGLPHLLQ*FVYKWS
Trigger: AGACCATTTGTAGACAAAGCACTGAAGCAGATGGGG...CAATCCCTGAAAGATTAAGCCCTGAAGGAAAGGACTTCCTTTCTCACTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCTCTCCAGCAGGTCTCTaGTCCAATCTTAACTTCAGA +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRSPAGL*SNLNFR
Trigger: TCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGA...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTTTCAGCAGCATTCCTaGAATGTCACAGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAFQQHS*NVTEKL
Trigger: AAGCTTTTCTGTGACATTGCAGGAATGCTGCTGAAA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTTTAGCAAATCCAAGTaGTTTGGAAGCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAFSKSK*FGSPFS
Trigger: AGAGAAAGGGCTTCCAAAGCACTTGGATTTGCTAAA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ATACTCATGCCAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGTCTGGAACAAACATTTaGAAGTTTTCTAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: ILMPRPLASHHLYDNTPQSGTNI*KFSNPG
Trigger: TCCTGGGTTAGAAAACTTGCAAATGTTTGTTCCAGA...CTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTGGCATGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGCTGCATTGAGTAACTaGAAAATAATACTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHAALSN*KIILFS
Trigger: GGAGAAGAGTATTATTTTGCAGTTACTCAATGCAGC...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTGCTGCATTGAGTAACTaGAAAATAATACTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSAALSN*KIILFS
Trigger: GGAGAAGAGTATTATTTTGCAGTTACTCAATGCAGC...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTCGGCAGCGCGGTCAATGGCATTaGTTATCCTGTTGCATAGCT +
Preference number: 4 (lower is better)
Translates to: CSNLNFRHSCMTFRRTRQRGQWH*LSCCIA
Trigger: AGCTATGCAACAGGATAAGCAATGCCATTGACCGCG...CTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp ACTATGCCATGCTCATGGAGGACGTTGATCGCAATGGTGATCTGCTTTGAATACCTCAGGGACCTAAACTaGAATTCAGCAGCTATGGAA +
Preference number: 4 (lower is better)
Translates to: TMPCSWRTLIAMVICFEYLRDLN*NSAAME
Trigger: TTCCATAGCTGCTGAATTGCAGTTTAGGTCCCTGAG...GTATTCAAAGCAGATCACCATTGCGATCAACGTCCTCCATGAGCATGGCATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGATCGCAATGGTGATCTaGTTTGAATACAGCCTAATC +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAIAMVI*FEYSLI
Trigger: GATTAGGCTGTATTCAAAGCAGATCACCATTGCGAT...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCGGTGGACTATGCCATaGTCATGGAGGACGTTGATC +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLRWTMP*SWRTLI
Trigger: GATCAACGTCCTCCATGAGCATGGCATAGTCCACCG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTAGTGATGACTTCAGGTaGCATGTATGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSSDDFR*HVCCCP
Trigger: GGGACAGCAGCATACATGGCACCTGAAGTCATCACT...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTGACGCTTGTCACCTGTaGAGTCTTCAGTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSDACHL*SLQSWK
Trigger: CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTC...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTTATTCCTCTGATGTTTaGTTGACATGCGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSYSSDV*LTCVSS
Trigger: AGATGAAACGCATGTCAACCAAACATCAGAGGAATA...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ATGACATTCAGAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTTCCAGTGTCTTTATGTaGAGGCTGATTTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: MTFRRTRQRTRKAGSNEGSSVFM*RLIWCI
Trigger: AATGCACCAAATCAGCCTCCACATAAAGACACTGGA...ACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTCTGAATGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTATAAAAAGAAGTCCTaGTCGTTAATTGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLYKKKS*SLIVRP
Trigger: AGGACGGACAATTAACGACCAGGACTTCTTTTTATA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACTATAAAAAGAAGTCCTaGTCGTTAATTGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHYKKKS*SLIVRP
Trigger: AGGACGGACAATTAACGACCAGGACTTCTTTTTATA...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATCCGGCTCATTACCTTTaGATGGTCGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYPAHYL*MVEGKG
Trigger: TCCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGG...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTTCAGAAAACTCCACTaGACGATCGTTCTTTACCAA +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAFRKLH*TIVLYQ
Trigger: TTGGTAAAGAACGATCGTCCAGTGGAGTTTTCTGAA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCACCCCACATGGGATCTaGAAATTCAGAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRTPHGI*KFRKLH
Trigger: GTGGAGTTTTCTGAATTTCCAGATCCCATGTGGGGT...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000544041.5
CDS-3UTR CCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAAATCTGAACCCCACATaGGATCTGGAAATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARNLNPT*DLEIQK
Trigger: TTTCTGAATTTCCAGATCCCATGTGGGGTTCAGATT...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TCCTTACACTCTCTCACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAAATACTCAAGAGAGATaGTTCTCCAGCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SLHSLTSCLILKRDGSPANTQER*FSSRSL
Trigger: CAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATT...TGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTGAGAGAGTGTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
CDS-3UTR CCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCTCGATCACCGTGCTTaGTCAGAAGCAGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSLDHRA*SEADRH
Trigger: ATGCCTATCTGCTTCTGACCAAGCACGGTGATCGAG...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCTGGATGTCTGCTCCTaGCACAGAGTCATAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLLDVCS*HRVISP
Trigger: GGGACTTATGACTCTGTGCCAGGAGCAGACATCCAG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCTGGATGTCTGCTCCTaGCACAGAGTCATAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SHPHFIHNLKVVLILMPRLDVCS*HRVISP
Trigger: GGGACTTATGACTCTGTGCCAGGAGCAGACATCCAG...CCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTTCTGATGTGAACATGTaGTCCACGCGGTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSSDVNM*STRSMA
Trigger: TGCCATTGACCGCGTGGACCACATGTTCACATCAGA...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAGGTTTTCCTATGACATaGCCAATGCATTCATTCATC +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARGFPMT*PMHSFI
Trigger: GATGAATGAATGCATTGGCCATGTCATAGGAAAACC...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTCGGCAGAGAACTAGGCCCAACTTCTTCTTGTaGACCCACTTGAATCTCCTC +
Preference number: 4 (lower is better)
Translates to: LNFRHSCMTFRRTRQRTRPNFFL*THLNLL
Trigger: GAGGAGATTCAAGTGGGTCCACAAGAAGAAGTTGGG...CCTAGTTCTCTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTTCTTTCAGGGATTGGTaGCTTATGTCCCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSSFRDW*LMSHPH
Trigger: GTGGGGATGGGACATAAGCCACCAATCCCTGAAAGA...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCGGTCGAGGAGCTGGCTaGCGGTCCATCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVGRGAG*RSISSL
Trigger: CAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACC...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACTGCAGTCTTCAGTCTTaGAAGGTTAAAAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LERSKHYADVTVLSRARHCSLQS*KVKKAY
Trigger: ATAAGCCTTTTTAACCTTCCAAGACTGAAGACTGCA...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTGAACCCCTGGTATCATaGGCACTGCTGATGGATTTG +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSEPLVS*ALLMDL
Trigger: CAAATCCATCAGCAGTGCCCATGATACCAGGGGTTC...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCATGGTCCTGTCTTTCTGGATaGAACCAATGTACATCTTAC +
Preference number: 4 (lower is better)
Translates to: EGLGRELGRQVRMKVNPWSCLSG*NQCTSY
Trigger: GTAAGATGTACATTGGTTCCATCCAGAAAGACAGGA...CCATGGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp GTCTGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTCCCAGTTTGATTAGGACTCTTGCAAGCTaGATCTCCCAATGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: VWALFLSFTEHPKSPSLIRTLAS*ISQCAL
Trigger: GAGGGCACATTGGGAGATTCAGCTTGCAAGAGTCCT...AATCAAACTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TCTCTGGCTTCATGGAAGAGCTCCTTCAGGGCTCGACTGATCTCTATAACAGACATGCTCATGATGTGTTaGGTAACCTACAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: SLASWKSSFRARLISITDMLMMC*VTYNLC
Trigger: ACAAAGATTGTAGGTTACTCAACACATCATGAGCAT...GTCTGTTATAGAGATCAGTCGAGCCCTGAAGGAGCTCTTCCATGAAGCCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCAACTGCACATAATCTaGACCCCACATGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLQLHII*TPHGIW
Trigger: CCAGATCCCATGTGGGGTTCAGATTATGTGCAGTTG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCTGGGGCTGAAAGCCTaGATTCTGCTGCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLLGLKA*ILLLFP
Trigger: TGGAAATAGCAGCAGAATTCAGGCTTTCAGCCCCAG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTAGAAAATCAAATCCTTaGGTCGCCCACCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSRKSNP*VAHLGL
Trigger: AAGACCCAGGTGGGCGACTCAAGGATTTGATTTTCT...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTCCGTGGGGCTTGAGTaGCGACTCAGGGACCTAAAC +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSSVGLE*RLRDLN
Trigger: GTTTAGGTCCCTGAGTCGTCACTCAAGCCCCACGGA...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR TCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCCCAGATTGGGGTGTTTaGTGCCTTCGAATATTTTCA +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRPDWGV*CLRIFS
Trigger: TGAAAATATTCGAAGGCATCAAACACCCCAATCTGG...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCCATCGCAGTACTCCATaGAGATGTACATTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRHRSTP*RCTFLL
Trigger: GAGAAGAAATGTACATCTTCATGGAGTACTGCGATG...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
CDS-3UTR TCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTAATCACATGTTCCTaGAGTCCCAGCCTTGACACC +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVLITCS*SPSLDT
Trigger: GGTGTCAAGGCTGGGACTTCAGGAACATGTGATTAG...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCGAGCAGCAGGAGAAGTaGCGCTTGTCACCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSEQQEK*RLSPVQ
Trigger: CTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTC...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp TCCTTACACTCTCTCACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAATTATCCGTTTTACCTaGTCAAATGAGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLHSLTSCLILKRDGSPAIIRFT*SNETLW
Trigger: CCAGAGGGTCTCATTTGAGCAGGTAAAACGGATAAT...TGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTGAGAGAGTGTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAGTCCTGGAAGTCTTTTaGAGCATATTTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: NLERSKHYADVTVLSRARVLEVF*SIFFIV
Trigger: GACTATGAAAAATATGCTGCAAAAGACTTCCAGGAC...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGGTCCTGGAAGTCTTTTaGAGCATATTTTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: LNLERSKHYADVTVLSRAVLEVF*SIFFIV
Trigger: GACTATGAAAAATATGCTGCAAAAGACTTCCAGGAC...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCAAGCTTCTTGGATATaGAGTCCCGCGACTGGATGT +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVQASWI*SPATGC
Trigger: ACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTG...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GTCTGCAGTTTCCTTGATAGTCTTATGGTCATTAGGTTGAAATCGAATCTCTTTTGTGCTCCAGTCTGGTaGTCCCCAGCCAAGAGAATC +
Preference number: 4 (lower is better)
Translates to: VCSFLDSLMVIRLKSNLFCAPVW*SPAKRI
Trigger: GATTCTCTTGGCTGGGGAGCACCAGACTGGAGCACA...AAAGAGATTCGATTTCAACCTAATGACCATAAGACTATCAAGGAAACTGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCCCCCATCTGCTTCAGTaGTTTGTCTACAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAPHLLQ*FVYKWS
Trigger: AGACCATTTGTAGACAAAGCACTGAAGCAGATGGGG...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTGCTATACGTGCCCTTTaGAAGGAACCATCCATTAGC +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSAIRAL*KEPSIS
Trigger: GCTAATGGATGGTTCCTTGCAAAGGGCACGTATAGC...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCAAGCTTCCCGGCCTGTaGTTCTCCTCCCCGTATGTA +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVKLPGL*FSSPYV
Trigger: TACATACGGGGAGGAGAAGCACAGGCCGGGAAGCTT...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTGCATCATTCTTCAGCTaGTGCAAAGCTTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSASFFS*CKALAM
Trigger: CATCGCCAAAGCTTTGCAGCAGCTGAAGAATGATGC...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TCTCACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCATTTTGTTTCCTCTTTaGCATTTGAAGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: SHQLLNTQERWFSSRSLLILFPL*HLKVTF
Trigger: GAAGGTGACCTTCAAATGGCAAAGAGGAAACAAAAT...GAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTAGTGATGACTTCAGGTaGCATGTATGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVSDDFR*HVCCCP
Trigger: GGGACAGCAGCATACATGGCACCTGAAGTCATCACT...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTGACGCTTGTCACCTGTaGAGTCTTCAGTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVDACHL*SLQSWK
Trigger: CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTC...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTGACGCTTGTCACCTGTaGAGTCTTCAGTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLDACHL*SLQSWK
Trigger: CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTC...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GATTGGTGGCTTATGTCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCCTCCAGAGGGCCTTTTaGCACATCAGACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: DWWLMSHPHFIHNLKVVLLQRAF*HIRQTG
Trigger: TCCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAG...GAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGACATAAGCCACCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTCAGTCCTAGAAGTCTaGCGTGCAGGTCTGGCTATA +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLSVLEV*RAGLAI
Trigger: TATAGCCAGACCTGCACGCCAGACTTCTAGGACTGA...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTTCTTTGTTCCAGGAGTaGCTTTGCACTGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSSLFQE*LCTALL
Trigger: TAGAAGGGCAGTGCAAAGCCACTCCTGGAACAAAGA...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TCACCAGGCATGGTCTGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTCTCATTACCTTTGGATaGTCGAGGGGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: SPGMVWALFLSFTEHPKSLITFG*SRGRDF
Trigger: GAAATCCCTTCCCCTCGACCATCCAAAGGTAATGAG...AGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTATGCAGTCCCGCGACTaGATGTCGAAGCTGTTATCT +
Preference number: 4 (lower is better)
Translates to: PHFIHNLKVVLILMPRPLMQSRD*MSKLLS
Trigger: AGATAACAGCTTCGACATCCAGTCGCGGGACTGCAT...AAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCGATCACCGTGCTTaGTCAGAAGCAGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVLDHRA*SEADRH
Trigger: ATGCCTATCTGCTTCTGACCAAGCACGGTGATCGAG...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCGAATGGTCGAGGAGCTaGCTGGCGGTCCATCTCATC +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSEWSRS*LAVHLI
Trigger: GATGAGATGGACCGCCAGCCAGCTCCTCGACCATTC...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACAACCTTGACAAACGAATaGTCGAGGAGCTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTTLTNE*SRSWLA
Trigger: CGCCAGCCAGCTCCTCGACCATTCGTTTGTCAAGGT...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCATTTTCAGGAACGCTaGAACCCCTGGTATCATGGG +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLHFQER*NPWYHG
Trigger: CCCATGATACCAGGGGTTCCAGCGTTCCTGAAAATG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR CAA 72 bp GTCTGCAGTTTCCTTGATAGTCTTATGGTCATTAGGTaGAAATCGAATCTCTTTCATGGCCATCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VCSFLDSLMVIR*KSNLFHGHQLP
Trigger: GGGGAGCTGATGGCCATGAAAGAGATTCGATTTCAACCTAATGACCATAAGACTATCAAGGAAACTGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCAGGACTCTTGCAAGCTaGATCTCCCAATGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVRTLAS*ISQCAL
Trigger: GAGGGCACATTGGGAGATTCAGCTTGCAAGAGTCCT...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCCTGAAGAGCCTGCAATaGTGGATAAAGTGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDALKSLQ*WIKCFY
Trigger: ATAGAAGCACTTTATCCATCATTGCAGGCTCTTCAG...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTTCAGACACTCATGTATaGCATTCAGAAGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVSDTHV*HSEGLG
Trigger: GCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGA...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTCGGCAGAGAACTTCAGACACTCATGTATaGCATTCAGAAGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: NLNFRHSCMTFRRTRQRTSDTHV*HSEGLG
Trigger: GCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGA...AGTTCTCTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
CDS-3UTR TCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGATGCGCAGACTGCATaGCAACTAGTAAAAGATTAT +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRDAQTA*QLVKDY
Trigger: ATAATCTTTTACTAGTTGTCATGCAGTCTGCGCATC...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ATTTCTCGGTACCTCTTTTCTTCAAACAATCGGACTGACTTCTGGATAGCTTCTTTCCTCTTTGCCATTTaGAGGTCACCTTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: ISRYLFSSNNRTDFWIASFLFAI*RSPSSS
Trigger: GCTTGAGGAAGGTGACCTTCAAATGGCAAAGAGGAA...AGAAGCTATCCAGAAGTCAGTCCGATTGTTTGAAGAAAAGAGGTACCGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATGTCAAAACACTACGCTaGTGTCACGGTTCTCAGTCG +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYVKTLR*CHGSQS
Trigger: CGACTGAGAACCGTGACATCAGCGTAGTGTTTTGAC...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCCTCATGGAGATTTCCTaGGAATTAGGCAAAGTTACT +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRLMEIS*ELGKVT
Trigger: AGTAACTTTGCCTAATTCTCAGGAAATCTCCATGAG...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544041.5
CDS-3UTR GCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCTGTTGTTCTAAGAGCTaGTCGGATCTTTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDACCSKS*SDLFLL
Trigger: CAGGAGAAAAAGATCCGAGCAGCTCTTAGAACAACA...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATATTGTCCGTCCTGCATaGCAGGCTTGTAGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYIVRPA*QACSSN
Trigger: GTTAGAGCTACAAGCCTGGCATGCAGGACGGACAAT...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCATTATCCGTTTTACCTaGTCAAATGAGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAIIRFT*SNETLW
Trigger: CCAGAGGGTCTCATTTGAGCAGGTAAAACGGATAAT...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACACACAAACAGAGTGCCTaGACCCTGTCCTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTHKQSA*TLSWKS
Trigger: AGACTTCCAGGACAGGGTGCAGGCACTCTGTTTGTG...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTGTGCTCCAGTCTGGTaGTCCCCAGCCAAGAGAATC +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSCAPVW*SPAKRI
Trigger: GATTCTCTTGGCTGGGGAGCACCAGACTGGAGCACA...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp AATCGGACTGACTTCTGGATAGCTTCTATGGGTCCTAGTTTAGAAGCAGTATCTTACCAATGCTATACGTaGCCTTTGCAAGGAACCATC +
Preference number: 4 (lower is better)
Translates to: NRTDFWIASMGPSLEAVSYQCYT*PLQGTI
Trigger: GATGGTTCCTTGCAAAGGGCACGTATAGCATTGGTA...AGATACTGCTTCTAAACTAGGACCCATAGAAGCTATCCAGAAGTCAGTCCGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp TCACCAGGCATGGTCTGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTTACCAATGCTATACGTaGCCTTTGCAAGGAACCATC +
Preference number: 4 (lower is better)
Translates to: SPGMVWALFLSFTEHPKSYQCYT*PLQGTI
Trigger: GATGGTTCCTTGCAAAGGGCACGTATAGCATTGGTA...AGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTTCATTCTTCAGCTGCTaGAAAGCTTTGGCGATGACC +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVSFFSC*KALAMT
Trigger: GGTCATCGCCAAAGCTTTGCAGCAGCTGAAGAATGA...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GGCCAATGCATTCATTCATCAAGGCTTGTAAACTCAAGAAGTCATCTTCTGGTAGCATCATTCTTCAGCTaGTGCAAAGCTTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: GQCIHSSRLVNSRSHLLVASFFS*CKALAM
Trigger: CATCGCCAAAGCTTTGCAGCAGCTGAAGAATGATGC...TACCAGAAGATGACTTCTTGAGTTTACAAGCCTTGATGAATGAATGCATTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACATGTCACGGTGGACTATaGCATGCTCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTCHGGL*HAHGGR
Trigger: ACGTCCTCCATGAGCATGGCATAGTCCACCGTGACA...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp TTTCCTATGACATGGCCAATGCATTCATTCATCAAGGCTTGTAAACTCAAGAAGTTGTGCTCATACTCATaGCAAGGCCTCTTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: FPMTWPMHSFIKACKLKKLCSYS*QGLLPV
Trigger: GACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAA...CTTCTTGAGTTTACAAGCCTTGATGAATGAATGCATTGGCCATGTCATAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp TGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTCGGCAGAGGTTTCACAGTCAGTaGACTCAACAAACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: CSNLNFRHSCMTFRRTRQRFHSQ*TQQTGD
Trigger: ATCTCCTGTTTGTTGAGTGCACTGACTGTGAAACCT...CTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCTCTGTCGAGGTGTGCTaGGGGGAGAGGTACCATAAA +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVSVEVC*GERYHK
Trigger: TTTATGGTACCTCTCCCCCCAGCACACCTCGACAGA...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTTCCTATGACATGGCCAATGCATTCATTCATCAAGGCTTGTAAACTCAAGAAGTCAGTCCTAGAAGTCTaGCGTGCAGGTCTGGCTATA +
Preference number: 4 (lower is better)
Translates to: FPMTWPMHSFIKACKLKKSVLEV*RAGLAI
Trigger: TATAGCCAGACCTGCACGCCAGACTTCTAGGACTGA...CTTCTTGAGTTTACAAGCCTTGATGAATGAATGCATTGGCCATGTCATAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTTCTTTGTTCCAGGAGTaGCTTTGCACTGCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVSLFQE*LCTALL
Trigger: TAGAAGGGCAGTGCAAAGCCACTCCTGGAACAAAGA...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GATTGGTGGCTTATGTCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCCTCATTACCTTTGGATaGTCGAGGGGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: DWWLMSHPHFIHNLKVVLLITFG*SRGRDF
Trigger: GAAATCCCTTCCCCTCGACCATCCAAAGGTAATGAG...GAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGACATAAGCCACCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCGCCTCTCAAGCTTCTTaGATATGCAGTCCCGCGACT +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVASQAS*ICSPAT
Trigger: AGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGC...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATTGGAAGCCCTTTCTCTaGCTTCATGGAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYWKPFL*LHGRAP
Trigger: AGGAGCTCTTCCATGAAGCCAGAGAAAGGGCTTCCA...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTTCCTATGACATGGCCAATGCATTCATTCATCAAGGCTTGTAAACTCAAGAAGGGGGATAATGAGGTGTaGGTTAGGAGGGTCACTATG +
Preference number: 4 (lower is better)
Translates to: FPMTWPMHSFIKACKLKKGDNEV*VRRVTM
Trigger: CATAGTGACCCTCCTAACCCACACCTCATTATCCCC...CTTCTTGAGTTTACAAGCCTTGATGAATGAATGCATTGGCCATGTCATAGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTTCACCAGGCATGGTCTaGGCATTGTTTTTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSSPGMV*ALFLSF
Trigger: AAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATTCTTTCAGGGATTGGTaGCTTATGTCCCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYSFRDW*LMSHPH
Trigger: GTGGGGATGGGACATAAGCCACCAATCCCTGAAAGA...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGGGTGCTGTTCACTTCACCAGGCATGGTCTGGGCATTGTTTTTGAGCTTTACTTGCAGTCTTCAGTCTTaGAAGGTTAAAAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: RVLFTSPGMVWALFLSFTCSLQS*KVKKAY
Trigger: ATAAGCCTTTTTAACCTTCCAAGACTGAAGACTGCA...AGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGAAGTGAACAGCACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTAGGAGACAGAGGCGATaGTCCGTGTACAGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLRRQRR*SVYSSN
Trigger: ATTACTACTGTACACGGACCATCGCCTCTGTCTCCT...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
3UTR CAA 72 bp CAAGGTATGGGACGCCTGATAACACTACAACTTCTTTaGAACCTAGAAAGGTCAAAACACTACGCTGATGTC +
Preference number: 4 (lower is better)
Translates to: QGMGRLITLQLL*NLERSKHYADV
Trigger: GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTATCAGGCGTCCCATACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCCACATTATTCCTCTaGTGTTTGGTTGACATGCGT +
Preference number: 4 (lower is better)
Translates to: SHPHFIHNLKVVLILMPRPTLFL*CLVDMR
Trigger: ACGCATGTCAACCAAACATCAGAGGAATAATGTGGG...CCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCTTTTACCTGCTCAAATaGGACCCTCTGGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVFYLLK*DPLALE
Trigger: CTCCAACGCCAGAGGGTCTCATTTGAGCAGGTAAAA...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACAGAACCTCCTGCAGCATaGACTGGTAGTACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTEPPAA*TGSTAS
Trigger: TGAAGCAGTACTACCAGTTCATGCTGCAGGAGGTTC...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR TCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCAAACTATGCGATGCTTaGGGTAATTGCTGTAGCATT +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAKLCDA*GNCCSI
Trigger: AATGCTACAGCAATTACCTCAAGCATCGCATAGTTT...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCCTTGACATACTGTTTTaGTTTCAGAACATCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDALDILF*FQNIQE
Trigger: CTCCTGGATGTTCTGAAATCAAAACAGTATGTCAAG...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTGCAGATAGGCATCGATaGGTACGTCATCTGAATCTT +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVADRHR*VRHLNL
Trigger: AAGATTCAGATGACGTACTCATCGATGCCTATCTGC...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGCATCAAATTCTaGTGTGAACATGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVLSIKF*CEHVVH
Trigger: GTGGACCACATGTTCACATCAGAATTTGATGCTGAG...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCTCAGCATCAAATTCTaGTGTGAACATGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SHPHFIHNLKVVLILMPRLSIKF*CEHVVH
Trigger: GTGGACCACATGTTCACATCAGAATTTGATGCTGAG...CCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTTGTGTGGTTTTCCTATaGCATGGCCAATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSCVVFL*HGQCIH
Trigger: ATGAATGCATTGGCCATGTCATAGGAAAACCACACA...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCTTCAAACAATCGGACTaGCTTCTGGATAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAFKQSD*LLDSFY
Trigger: ATAGAAGCTATCCAGAAGTCAGTCCGATTGTTTGAA...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACACTAATCACATGTTCCTaGAGTCCCAGCCTTGACACC +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTLITCS*SPSLDT
Trigger: GGTGTCAAGGCTGGGACTTCAGGAACATGTGATTAG...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR TCA 90 bp GTCTGCAGTTTCCTTGATAGTCTTATGGTCATTAGGTTGAAATCGAATCTCTTTCTAATCACATGTTCCTaGAGTCCCAGCCTTGACACC +
Preference number: 4 (lower is better)
Translates to: VCSFLDSLMVIRLKSNLFLITCS*SPSLDT
Trigger: GGTGTCAAGGCTGGGACTTCAGGAACATGTGATTAG...AAAGAGATTCGATTTCAACCTAATGACCATAAGACTATCAAGGAAACTGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp GCAGGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGCTTACATATATTGATTaGTGTCTCATGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: AGLCSNLNFRHSCMTFRRLTYID*CLMSPS
Trigger: GGAGGGAGACATGAGACATCAATCAATATATGTAAG...CCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTGATGTTTGGTTGACATaGGTTTCATCTGTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLDVWLT*VSSVEV
Trigger: CACCTCGACAGATGAAACGCATGTCAACCAAACATC...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACAATTGTCCGTCCTGCATaGCAGGCTTGTAGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTIVRPA*QACSSN
Trigger: GTTAGAGCTACAAGCCTGGCATGCAGGACGGACAAT...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACATTCCAGGAGTGGCTTTaGACTGCCCTTCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTFQEWL*TALLLK
Trigger: CTTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAA...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTTACCAATGCTATACGTaGCCTTTGCAAGGAACCATC +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVYQCYT*PLQGTI
Trigger: GATGGTTCCTTGCAAAGGGCACGTATAGCATTGGTA...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTTCTCCAGCAGGTCTCTaGTCCAATCTTAACTTCAGA +
Preference number: 4 (lower is better)
Translates to: PHFIHNLKVVLILMPRPLSPAGL*SNLNFR
Trigger: TCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGA...AAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCTCTAACCCAGGAATTTaGACCTTGACATACTGTTTT +
Preference number: 4 (lower is better)
Translates to: LLNLERSKHYADVTVLSRSNPGI*TLTYCF
Trigger: AAAACAGTATGTCAAGGTGCAAATTCCTGGGTTAGA...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CAAGGCAGTGAGAAAGGAAGTCCTTTCCTTCAGGGCTTAATCTTTCAGGGATTGTCTAACCCAGGAATTTaGACCTTGACATACTGTTTT +
Preference number: 4 (lower is better)
Translates to: QGSEKGSPFLQGLIFQGLSNPGI*TLTYCF
Trigger: AAAACAGTATGTCAAGGTGCAAATTCCTGGGTTAGA...CAATCCCTGAAAGATTAAGCCCTGAAGGAAAGGACTTCCTTTCTCACTGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ACTATGCCATGCTCATGGAGGACGTTGATCGCAATGGTGATCTGCTTTGAATACTCTAACCCAGGAATTTaGACCTTGACATACTGTTTT +
Preference number: 4 (lower is better)
Translates to: TMPCSWRTLIAMVICFEYSNPGI*TLTYCF
Trigger: AAAACAGTATGTCAAGGTGCAAATTCCTGGGTTAGA...GTATTCAAAGCAGATCACCATTGCGATCAACGTCCTCCATGAGCATGGCATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTAAAAGATTATCCACCTaGATGCTTCTCAGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSKRLST*MLLRVS
Trigger: TGACACCCTGAGAAGCATGCAGGTGGATAATCTTTT...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CCTCAGCAAGAGTGTCTGGAACAAACATTTGCAAGTTTTCTAACCCAGGAATTTGTACCCCTGAATCATTaGTTCTCGGTAGTACTGTTG +
Preference number: 4 (lower is better)
Translates to: PQQECLEQTFASFLTQEFVPLNH*FSVVLL
Trigger: CAACAGTACTACCGAGAAGCAATGATTCAGGGGTAC...AAATTCCTGGGTTAGAAAACTTGCAAATGTTTGTTCCAGACACTCTTGCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGGGACCTAAACTaGAATTCAGCAGCTATGGAA +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVLRDLN*NSAAME
Trigger: TTCCATAGCTGCTGAATTGCAGTTTAGGTCCCTGAG...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCCGGTGGACTATGCCATaGTCATGGAGGACGTTGATC +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSRWTMP*SWRTLI
Trigger: GATCAACGTCCTCCATGAGCATGGCATAGTCCACCG...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCAGTGATGACTTCAGGTaGCATGTATGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVSDDFR*HVCCCP
Trigger: GGGACAGCAGCATACATGGCACCTGAAGTCATCACT...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTAGGTTTCACAGTCAGTaGACTCAACAAACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSRFHSQ*TQQTGD
Trigger: ATCTCCTGTTTGTTGAGTGCACTGACTGTGAAACCT...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ACTATGCCATGCTCATGGAGGACGTTGATCGCAATGGTGATCTGCTTTGAATACTATTCCTCTGATGTTTaGTTGACATGCGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: TMPCSWRTLIAMVICFEYYSSDV*LTCVSS
Trigger: AGATGAAACGCATGTCAACCAAACATCAGAGGAATA...GTATTCAAAGCAGATCACCATTGCGATCAACGTCCTCCATGAGCATGGCATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCATTAGACCGACTGGCTaGCCTCCCCACATTATTCCT +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVIRPTG*PPHIIP
Trigger: AGGAATAATGTGGGGAGGCCAGCCAGTCGGTCTAAT...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTCGGCAGAGAACTCATGGGCACAGATACTaGAAGCTTAGCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: NLNFRHSCMTFRRTRQRTHGHRY*KLSIAT
Trigger: TGTAGCAATGCTAAGCTTCCAGTATCTGTGCCCATG...AGTTCTCTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp TGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTCGGCAGAATCTGAACCCCACATaGGATCTGGAAATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: CSNLNFRHSCMTFRRTRQNLNPT*DLEIQK
Trigger: TTTCTGAATTTCCAGATCCCATGTGGGGTTCAGATT...CTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
CDS-3UTR CCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCTGGAAGCCCTTTCTCTaGCTTCATGGAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVWKPFL*LHGRAP
Trigger: AGGAGCTCTTCCATGAAGCCAGAGAAAGGGCTTCCA...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCAAATCCAAGTGCTTTaGAAGCCCTTTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVQIQVL*KPFLWL
Trigger: AAGCCAGAGAAAGGGCTTCCAAAGCACTTGGATTTG...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCAAATCCAAGTGCTTTaGAAGCCCTTTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLQIQVL*KPFLWL
Trigger: AAGCCAGAGAAAGGGCTTCCAAAGCACTTGGATTTG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCGGTCCACGCGGTCAATaGCATTGCTTATCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSGPRGQ*HCLSCC
Trigger: GCAACAGGATAAGCAATGCCATTGACCGCGTGGACC...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTGTAACAGGACTGTGTaGTTTTCCTATGACATGGCC +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLCNRTV*FSYDMA
Trigger: GGCCATGTCATAGGAAAACCACACAGTCCTGTTACA...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGTGTAACAGGACTGTGTaGTTTTCCTATGACATGGCC +
Preference number: 4 (lower is better)
Translates to: SHPHFIHNLKVVLILMPRCNRTV*FSYDMA
Trigger: GGCCATGTCATAGGAAAACCACACAGTCCTGTTACA...CCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTTAGGAGGGTCACTATaGCATCGAGGTACCTTCATA +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLLGGSL*HRGTFI
Trigger: TATGAAGGTACCTCGATGCCATAGTGACCCTCCTAA...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCGCAATTCAGCAGCTATaGAAGCCAATCGATCATTTT +
Preference number: 4 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAAIQQL*KPIDHF
Trigger: AAAATGATCGATTGGCTTCCATAGCTGCTGAATTGC...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATCCCAACTTCTTCTTGTaGACCCACTTGAATCTCCTC +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYPNFFL*THLNLL
Trigger: GAGGAGATTCAAGTGGGTCCACAAGAAGAAGTTGGG...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTTCACCAGGCATGGTCTaGGCATTGTTTTTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: PHFIHNLKVVLILMPRPLSPGMV*ALFLSF
Trigger: AAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA...AAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TTTCCTATGACATGGCCAATGCATTCATTCATCAAGGCTTGTAAACTCAAGAAGAGGAGACAGAGGCGATaGTCCGTGTACAGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: FPMTWPMHSFIKACKLKKRRQRR*SVYSSN
Trigger: ATTACTACTGTACACGGACCATCGCCTCTGTCTCCT...CTTCTTGAGTTTACAAGCCTTGATGAATGAATGCATTGGCCATGTCATAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCAGTGCTGAATCCCTCTaGAGTGGGGATAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVSAESL*SGDNEV
Trigger: CACCTCATTATCCCCACTCCAGAGGGATTCAGCACT...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCCACTGAGTCTAACATaGATGAGCACTGTACATTTT +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSPLSLT*MSTVHF
Trigger: AAAATGTACAGTGCTCATTCATGTTAGACTCAGTGG...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTGATGCGCAGACTGCATaGCAACTAGTAAAAGATTAT +
Preference number: 4 (lower is better)
Translates to: GLCSNLNFRHSCMTFRRTDAQTA*QLVKDY
Trigger: ATAATCTTTTACTAGTTGTCATGCAGTCTGCGCATC...AGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCCAGATTGGGGTGTTTaGTGCCTTCGAATATTTTCA +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLPDWGV*CLRIFS
Trigger: TGAAAATATTCGAAGGCATCAAACACCCCAATCTGG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCATCGCAGTACTCCATaGAGATGTACATTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLHRSTP*RCTFLL
Trigger: GAGAAGAAATGTACATCTTCATGGAGTACTGCGATG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
CDS-3UTR GCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCATGTCTACTAAAGCCTaGTTCTGTGCTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVMSTKA*FCAPVW
Trigger: CCAGACTGGAGCACAGAAGCAGGCTTTAGTAGACAT...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCATTGCTTATCCTGTTaGATAGCTCCAATGCATCAT +
Preference number: 4 (lower is better)
Translates to: LLLNLERSKHYADVTVLSHCLSC*IAPMHH
Trigger: ATGATGCATTGGAGCTATGCAACAGGATAAGCAATG...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATCTCAGGGACCTAAACTaGAATTCAGCAGCTATGGAA +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYLRDLN*NSAAME
Trigger: TTCCATAGCTGCTGAATTGCAGTTTAGGTCCCTGAG...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GTCTGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTCCCAGTTTGATTCATGGGCACAGATACTaGAAGCTTAGCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: VWALFLSFTEHPKSPSLIHGHRY*KLSIAT
Trigger: TGTAGCAATGCTAAGCTTCCAGTATCTGTGCCCATG...AATCAAACTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp TCACCAGGCATGGTCTGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTAATCTGAACCCCACATaGGATCTGGAAATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SPGMVWALFLSFTEHPKSNLNPT*DLEIQK
Trigger: TTTCTGAATTTCCAGATCCCATGTGGGGTTCAGATT...AGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATTTAGGAGGGTCACTATaGCATCGAGGTACCTTCATA +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYLGGSL*HRGTFI
Trigger: TATGAAGGTACCTCGATGCCATAGTGACCCTCCTAA...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCGGGGATAATGAGGTGTaGGTTAGGAGGGTCACTATG +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSGDNEV*VRRVTM
Trigger: CATAGTGACCCTCCTAACCCACACCTCATTATCCCC...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCCCCAACTTCTTCTTGTaGACCCACTTGAATCTCCTC +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVPNFFL*THLNLL
Trigger: GAGGAGATTCAAGTGGGTCCACAAGAAGAAGTTGGG...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TCACCAGGCATGGTCTGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTTCTTTATGTGGAGGCTaGTTTGGTGCATTCATTTTT +
Preference number: 4 (lower is better)
Translates to: SPGMVWALFLSFTEHPKSSLCGG*FGAFIF
Trigger: AAAAATGAATGCACCAAATCAGCCTCCACATAAAGA...AGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCCATCAAATTCTGATGTaGACATGTGGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSHQILM*TCGPRG
Trigger: ACCGCGTGGACCACATGTTCACATCAGAATTTGATG...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR TCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCCTCAGCATCAAATTCTaGTGTGAACATGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVLSIKF*CEHVVH
Trigger: GTGGACCACATGTTCACATCAGAATTTGATGCTGAG...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp GATTGGTGGCTTATGTCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCTTCAAACAATCGGACTaGCTTCTGGATAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: DWWLMSHPHFIHNLKVVLFKQSD*LLDSFY
Trigger: ATAGAAGCTATCCAGAAGTCAGTCCGATTGTTTGAA...GAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGACATAAGCCACCAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp GTCTGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTCCCAGTTTGATTTGTTGTTCTAAGAGCTaGTCGGATCTTTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VWALFLSFTEHPKSPSLICCSKS*SDLFLL
Trigger: CAGGAGAAAAAGATCCGAGCAGCTCTTAGAACAACA...AATCAAACTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACATACCAATGCTATACGTaGCCTTTGCAAGGAACCATC +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTYQCYT*PLQGTI
Trigger: GATGGTTCCTTGCAAAGGGCACGTATAGCATTGGTA...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTTTCAGCAGCATTCCTaGAATGTCACAGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLFQQHS*NVTEKL
Trigger: AAGCTTTTCTGTGACATTGCAGGAATGCTGCTGAAA...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTTTTAGCAAATCCAAGTaGTTTGGAAGCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVFSKSK*FGSPFS
Trigger: AGAGAAAGGGCTTCCAAAGCACTTGGATTTGCTAAA...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTGCCAGTAAGCCTGAATTCTGCTaGTATTTCCAGGTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: FIHNLKVVLILMPRPLASKPEFC*YFQVLS
Trigger: AGAAAGGACCTGGAAATAGCAGCAGAATTCAGGCTT...ACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATAAAAGATTATCCACCTaGATGCTTCTCAGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYKRLST*MLLRVS
Trigger: TGACACCCTGAGAAGCATGCAGGTGGATAATCTTTT...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTGCCAGTAAAAGATTATCCACCTaGATGCTTCTCAGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: FIHNLKVVLILMPRPLASKRLST*MLLRVS
Trigger: TGACACCCTGAGAAGCATGCAGGTGGATAATCTTTT...ACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TCGAATATTTTCAATTCGTCTGCAGTTTCCTTGATAGTCTTATGGTCATTAGGTTCATTCTTCAGCTGCTaGAAAGCTTTGGCGATGACC +
Preference number: 4 (lower is better)
Translates to: SNIFNSSAVSLIVLWSLGSFFSC*KALAMT
Trigger: GGTCATCGCCAAAGCTTTGCAGCAGCTGAAGAATGA...ACCTAATGACCATAAGACTATCAAGGAAACTGCAGACGAATTGAAAATATTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR GCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCGTACCCCTGAATCATTaGTTCTCGGTAGTACTGTTG +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVVPLNH*FSVVLL
Trigger: CAACAGTACTACCGAGAAGCAATGATTCAGGGGTAC...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTTTTGCATTACAAACCTaGAGCTTGCCAACAACAACA +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVFALQT*SLPTTT
Trigger: TGTTGTTGTTGGCAAGCTGCAGGTTTGTAATGCAAA...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACAAATACTCAAGAGAGATaGTTCTCCAGCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTNTQER*FSSRSL
Trigger: CAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATT...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp TCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCTCAGCAAGAGTGTCTaGAACAAACATTTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: SHPHFIHNLKVVLILMPRLSKSV*NKHLQV
Trigger: AACTTGCAAATGTTTGTTCCAGACACTCTTGCTGAG...CCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GGCCAATGCATTCATTCATCAAGGCTTGTAAACTCAAGAAGTCATCTTCTGGTAGGTTTTCCTATGACATaGCCAATGCATTCATTCATC +
Preference number: 4 (lower is better)
Translates to: GQCIHSSRLVNSRSHLLVGFPMT*PMHSFI
Trigger: GATGAATGAATGCATTGGCCATGTCATAGGAAAACC...TACCAGAAGATGACTTCTTGAGTTTACAAGCCTTGATGAATGAATGCATTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCTTAGGAGGGTCACTATaGCATCGAGGTACCTTCATA +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVLGGSL*HRGTFI
Trigger: TATGAAGGTACCTCGATGCCATAGTGACCCTCCTAA...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCCCCAACTTCTTCTTGTaGACCCACTTGAATCTCCTC +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSPNFFL*THLNLL
Trigger: GAGGAGATTCAAGTGGGTCCACAAGAAGAAGTTGGG...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATGCAGTATCTTTACTCTaGCTGATTAGTGTCCGAAGT +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYAVSLL*LISVRS
Trigger: ACTTCGGACACTAATCAGCCAGAGTAAAGATACTGC...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCAATCGGACTGACTTCTaGATAGCTTCTATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVNRTDF*IASMGP
Trigger: AGGACCCATAGAAGCTATCCAGAAGTCAGTCCGATT...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCAGGAGACAGAGGCGATaGTCCGTGTACAGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSRRQRR*SVYSSN
Trigger: ATTACTACTGTACACGGACCATCGCCTCTGTCTCCT...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp TTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTGCCAGTGTTACTGTGCTTCTATaGAGCTCCACACCAAAATAC +
Preference number: 4 (lower is better)
Translates to: FIHNLKVVLILMPRPLASVTVLL*SSTPKY
Trigger: GTATTTTGGTGTGGAGCTCCATAGAAGCACAGTAAC...ACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544041.5
CDS-3UTR TCA 90 bp GGCCAATGCATTCATTCATCAAGGCTTGTAAACTCAAGAAGTCATCTTCTGGTATCTTTATGTGGAGGCTaGTTTGGTGCATTCATTTTT +
Preference number: 4 (lower is better)
Translates to: GQCIHSSRLVNSRSHLLVSLCGG*FGAFIF
Trigger: AAAAATGAATGCACCAAATCAGCCTCCACATAAAGA...TACCAGAAGATGACTTCTTGAGTTTACAAGCCTTGATGAATGAATGCATTGGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR TCA 90 bp GTCTGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTCCCAGTTTGATTTTCAAACAATCGGACTaGCTTCTGGATAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: VWALFLSFTEHPKSPSLIFKQSD*LLDSFY
Trigger: ATAGAAGCTATCCAGAAGTCAGTCCGATTGTTTGAA...AATCAAACTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCGATGTTTGGTTGACATaGGTTTCATCTGTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSDVWLT*VSSVEV
Trigger: CACCTCGACAGATGAAACGCATGTCAACCAAACATC...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCTGTTGTTCTAAGAGCTaGTCGGATCTTTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVCCSKS*SDLFLL
Trigger: CAGGAGAAAAAGATCCGAGCAGCTCTTAGAACAACA...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACATGTTGTTCTAAGAGCTaGTCGGATCTTTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTCCSKS*SDLFLL
Trigger: CAGGAGAAAAAGATCCGAGCAGCTCTTAGAACAACA...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR GCA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTCTGGAACAAACATTTaGAAGTTTTCTAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLSGTNI*KFSNPG
Trigger: TCCTGGGTTAGAAAACTTGCAAATGTTTGTTCCAGA...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATTTTGCATTACAAACCTaGAGCTTGCCAACAACAACA +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYFALQT*SLPTTT
Trigger: TGTTGTTGTTGGCAAGCTGCAGGTTTGTAATGCAAA...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTTATTCCTCTGATGTTTaGTTGACATGCGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: LQLLLNLERSKHYADVTVYSSDV*LTCVSS
Trigger: AGATGAAACGCATGTCAACCAAACATCAGAGGAATA...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp CCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTTATTCCTCTGATGTTTaGTTGACATGCGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: PHFIHNLKVVLILMPRPLYSSDV*LTCVSS
Trigger: AGATGAAACGCATGTCAACCAAACATCAGAGGAATA...AAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCTCCAGTGTCTTTATGTaGAGGCTGATTTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVSSVFM*RLIWCI
Trigger: AATGCACCAAATCAGCCTCCACATAAAGACACTGGA...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CCA 90 bp GATTGGTGGCTTATGTCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCTATAAAAAGAAGTCCTaGTCGTTAATTGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: DWWLMSHPHFIHNLKVVLYKKKS*SLIVRP
Trigger: AGGACGGACAATTAACGACCAGGACTTCTTTTTATA...GAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGACATAAGCCACCAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATTCTTTATGTGGAGGCTaGTTTGGTGCATTCATTTTT +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYSLCGG*FGAFIF
Trigger: AAAAATGAATGCACCAAATCAGCCTCCACATAAAGA...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCATATCTGGGATGGCTTaGCGGGCTGTATATAAAAAG +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSISGMA*RAVYKK
Trigger: CTTTTTATATACAGCCCGTCAAGCCATCCCAGATAT...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR TCA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATCAGGAATTTGCACCTTaGCATACTGTTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYQEFAP*HTVLIS
Trigger: TGAAATCAAAACAGTATGTCAAGGTGCAAATTCCTG...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCGGCGTATCACAAACTTaGCCAATGATATTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVGVSQT*PMIFFL
Trigger: GAGAAAGAATATCATTGGTCAAGTTTGTGATACGCC...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCAATGGTGATCTGCTTTaGATACAGCCTAATCACATG +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVNGDLL*IQPNHM
Trigger: CATGTGATTAGGCTGTATTCAAAGCAGATCACCATT...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCATCGTTCTTTACCAATaGTATACGTGCCCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: ITLQLLLNLERSKHYADVIVLYQ*YTCPLQ
Trigger: TTGCAAAGGGCACGTATAGCATTGGTAAAGAACGAT...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR GCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCAAAAGATTATCCACCTaGATGCTTCTCAGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSKRLST*MLLRVS
Trigger: TGACACCCTGAGAAGCATGCAGGTGGATAATCTTTT...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTCCAGTGTCTTTATGTaGAGGCTGATTTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSSSVFM*RLIWCI
Trigger: AATGCACCAAATCAGCCTCCACATAAAGACACTGGA...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACAGCAATTCAGCAGCTATaGAAGCCAATCGATCATTTT +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTAIQQL*KPIDHF
Trigger: AAAATGATCGATTGGCTTCCATAGCTGCTGAATTGC...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp CTTATGTCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGGCAATTCAGCAGCTATaGAAGCCAATCGATCATTTT +
Preference number: 4 (lower is better)
Translates to: LMSHPHFIHNLKVVLILMAIQQL*KPIDHF
Trigger: AAAATGATCGATTGGCTTCCATAGCTGCTGAATTGC...CATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGACATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR TCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACACAGGAATTTGCACCTTaGCATACTGTTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTQEFAP*HTVLIS
Trigger: TGAAATCAAAACAGTATGTCAAGGTGCAAATTCCTG...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CCA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACATATAAAAAGAAGTCCTaGTCGTTAATTGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTYKKKS*SLIVRP
Trigger: AGGACGGACAATTAACGACCAGGACTTCTTTTTATA...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR TCA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTCTTTATGTGGAGGCTaGTTTGGTGCATTCATTTTT +
Preference number: 4 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSSLCGG*FGAFIF
Trigger: AAAAATGAATGCACCAAATCAGCCTCCACATAAAGA...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
3UTR CAA 72 bp TTTTTGAGCTTTACTGAACATCCAAAATCTCCCAGTTaGATTAATCCAGATGAGGTAAGGAAGATATTGGCA +
Preference number: 4 (lower is better)
Translates to: FLSFTEHPKSPS*INPDEVRKILA
Trigger: TGCCAATATCTTCCTTACCTCATCTGGATTAATCAAACTGGGAGATTTTGGATGTTCAGTAAAGCTCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS CCA 90 bp TCCGCCTCTACCCCGCCGCAGGAGCCGTGCGCGCCGCGGCCATCTTaGAAACGGCGACCGGCCGAGCGCCGGGGCTACGGTGGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: SASTPPQEPCAPRPS*KRRPAERRGYGGRR
Trigger: TCGCCGCCCACCGTAGCCCCGGCGCTCGGCCGGTCGCCGTTTCCAAGATGGCCGCGGCGCGCACGGCTCCTGCGGCGGGGTAGAGGCGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366919.6
CDS GCA 90 bp AAAGGCGGGAGGAGGGACCAGCGCGGCAGCGGCTTCTCTCATCCGTaGACGGAGCCCCGCATGGCCGCGGCGGGCAGTAAGCTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: KGGRRDQRGSGFSHP*TEPRMAAAGSKLQP
Trigger: AGGCTGCAGCTTACTGCCCGCCGCGGCCATGCGGGGCTCCGTGCACGGATGAGAGAAGCCGCTGCCGCGCTGGTCCCTCCTCCCGCCTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000542952.5
ENST00000544041.5
CDS-3UTR CAA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACGCTCCTCCGTGGGGCTaGAGTGACGACTCAGGGACC +
Preference number: 5 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYAPPWG*SDDSGT
Trigger: GGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAGC...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCGCTCCTCCGTGGGGCTaGAGTGACGACTCAGGGACC +
Preference number: 5 (lower is better)
Translates to: LMSRFSVARDTEETEAMVAPPWG*SDDSGT
Trigger: GGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAGC...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp ACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCATCCGGCTCATTACCTTaGGATGGTCGAGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: THPRLQMSAARPWPSPLASGSLP*DGRGEG
Trigger: CCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGGA...TGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGCTCCTCCGTGGGGCTaGAGTGACGACTCAGGGACC +
Preference number: 5 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNAPPWG*SDDSGT
Trigger: GGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAGC...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCAACGCGCCGCGGCCATCTaGGAAACGGCGACCGGCCGA +
Preference number: 5 (lower is better)
Translates to: HQLLNTQERWFSSRSLLQRAAAI*ETATGR
Trigger: TCGGCCGGTCGCCGTTTCCAAGATGGCCGCGGCGCG...TTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542952.5
CDS-3UTR CAA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGCCTCTCAAGCTTCTaGGATATGCAGTCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYSLSSF*DMQSRD
Trigger: GTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCT...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCGCACTGCTGATGGATTaGGGCAGCACAGAGTCACCA +
Preference number: 5 (lower is better)
Translates to: HLYDNTPQTPDVGRTPMAALLMD*GSTESP
Trigger: TGGTGACTCTGTGCTGCCCAAATCCATCAGCAGTGC...GGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGTCCGGCTCATTACCTTaGGATGGTCGAGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: NTTLMSRFSVARDTEETESGSLP*DGRGEG
Trigger: CCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGGA...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTCGCCCACCTGGGTCTaGTACCTCTACCACTCTCAC +
Preference number: 5 (lower is better)
Translates to: GQNTTLMSRFSVARDTEESPTWV*YLYHSH
Trigger: GTGAGAGTGGTAGAGGTACAAGACCCAGGTGGGCGA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTGCTCCTCCGTGGGGCTaGAGTGACGACTCAGGGACC +
Preference number: 5 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSAPPWG*SDDSGT
Trigger: GGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAGC...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCTGCTCATGGAGGACGTaGATCGCAATGGTGATCTGC +
Preference number: 5 (lower is better)
Translates to: LMSRFSVARDTEETEAMVCSWRT*IAMVIC
Trigger: GCAGATCACCATTGCGATCAACGTCCTCCATGAGCA...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS TCA 90 bp AGGGAGACATTTGAAAGTAGAACTTGGCAACTCAGCGCTCTCACCTaGAAGCTACACATCAGCAGGGTAAAGTGGGGGCGGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: RETFESRTWQLSALT*KLHISRVKWGRAGG
Trigger: GCCCCCGGCCCGCCCCCACTTTACCCTGCTGATGTGTAGCTTTCAGGTGAGAGCGCTGAGTTGCCAAGTTCTACTTTCAAATGTCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540205.1
CDS GCA 90 bp GCACAGGACAGACCCACCAGAATCAGCCCCCTAAGTGAACAGCGCTaGTGTGGAGACCGTCCTCTGGAGTCTGTTAGAGCTCTAGAGTCT +
Preference number: 5 (lower is better)
Translates to: AQDRPTRISPLSEQR*CGDRPLESVRALES
Trigger: AGACTCTAGAGCTCTAACAGACTCCAGAGGACGGTCTCCACAGCAGCGCTGTTCACTTAGGGGGCTGATTCTGGTGGGTCTGTCCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536852.1
CDS-3UTR CAA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCCGCGCCGCGGCCATCTaGGAAACGGCGACCGGCCGA +
Preference number: 5 (lower is better)
Translates to: FTVSALNKQEIKNKVWDARAAAI*ETATGR
Trigger: TCGGCCGGTCGCCGTTTCCAAGATGGCCGCGGCGCG...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366919.6
ENST00000392142.9
CDS-3UTR CAA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCACTGGAAGCTTAGCATaGCTACAGCCAAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: AASLTSWPPALQRAFCHITGSLA*LQPRLR
Trigger: CCTCAGCCTTGGCTGTAGCAATGCTAAGCTTCCAGT...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCGTTCCAGGAGTGGCTTaGCACTGCCCTTCTACTGAA +
Preference number: 5 (lower is better)
Translates to: PVTISMTTHPRLQMSAARVPGVA*HCPSTE
Trigger: TTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAAC...GCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGATCCGGCTCATTACCTTaGGATGGTCGAGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: KHYADVTVLSRARHGGDRSGSLP*DGRGEG
Trigger: CCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGGA...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACATCCGGCTCATTACCTTaGGATGGTCGAGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTSGSLP*DGRGEG
Trigger: CCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGGA...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGAAGCCTCTCAAGCTTCTaGGATATGCAGTCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRSLSSF*DMQSRD
Trigger: GTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCT...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp ACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTGGCATTCTTGTGGACCCACTaGAATCTCCTCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: THPRLQMSAARPWPSPLAFLWTH*NLLLDM
Trigger: CATATCCAAGAGGAGATTCAAGTGGGTCCACAAGAA...TGCCAAAGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATCCATGGCCCTCTCCTTaGGCACGAGTGATGACTTCA +
Preference number: 5 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNPWPSP*ARVMTS
Trigger: TGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACTCATCTGTGCAAACCTaGACAAACGAATGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYSSVQT*TNEWSR
Trigger: CCTCGACCATTCGTTTGTCAAGGTTTGCACAGATGA...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGCCTCCAGAGGGCCTTTaGCCACATCAGACAAACAGG +
Preference number: 5 (lower is better)
Translates to: GQNTTLMSRFSVARDTEEPPEGL*PHQTNR
Trigger: CCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGG...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATGCACTGCTGATGGATTaGGGCAGCACAGAGTCACCA +
Preference number: 5 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHALLMD*GSTESP
Trigger: TGGTGACTCTGTGCTGCCCAAATCCATCAGCAGTGC...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCCGCGGCCATCTaGGAAACGGCGACCGGCCGA +
Preference number: 5 (lower is better)
Translates to: LLLNLERSKHYADVTVLSRAAAI*ETATGR
Trigger: TCGGCCGGTCGCCGTTTCCAAGATGGCCGCGGCGCG...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366919.6
ENST00000392142.9
CDS-3UTR CAA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATGTTCCAGGAGTGGCTTaGCACTGCCCTTCTACTGAA +
Preference number: 5 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHVPGVA*HCPSTE
Trigger: TTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAAC...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp ATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCAAGGCAGTTCCAGGAGTGGCTTaGCACTGCCCTTCTACTGAA +
Preference number: 5 (lower is better)
Translates to: MVEELAGGPSHLWVTLKAVPGVA*HCPSTE
Trigger: TTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAAC...TGCCTTGAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGTCCGGCTCATTACCTTaGGATGGTCGAGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKSGSLP*DGRGEG
Trigger: CCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGGA...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTTCCGGCTCATTACCTTaGGATGGTCGAGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSSGSLP*DGRGEG
Trigger: CCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGGA...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAAGCCTCTCAAGCTTCTaGGATATGCAGTCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: KHYADVTVLSRARHGGDRSLSSF*DMQSRD
Trigger: GTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCT...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCTCAAAAGCGTCAATGTaGCAGTCGGGCTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: PVTISMTTHPRLQMSAARSKASM*QSGFSK
Trigger: CTTGGAGAAGCCCGACTGCAACATTGACGCTTTTGA...GCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp ATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTTCTCGGTAGTACTGTaGCAAGGTGACAGATTCAGA +
Preference number: 5 (lower is better)
Translates to: MTTHPRLQMSAARPWPSPFSVVL*QGDRFR
Trigger: TCTGAATCTGTCACCTTGCAACAGTACTACCGAGAA...AGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGTCGCCCACCTGGGTCTaGTACCTCTACCACTCTCAC +
Preference number: 5 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKSPTWV*YLYHSH
Trigger: GTGAGAGTGGTAGAGGTACAAGACCCAGGTGGGCGA...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACCACTTGAATCTCCTCTaGGATATGCTGGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYHLNLL*DMLVHL
Trigger: GAGATGAACCAGCATATCCAAGAGGAGATTCAAGTG...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACTTCTTGTGGACCCACTaGAATCTCCTCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYFLWTH*NLLLDM
Trigger: CATATCCAAGAGGAGATTCAAGTGGGTCCACAAGAA...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCCCATGGCCCTCTCCTTaGGCACGAGTGATGACTTCA +
Preference number: 5 (lower is better)
Translates to: KRMVEELAGGPSHLWVTLPWPSP*ARVMTS
Trigger: TGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG...GAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATTCATGCCAAGGCCTCTaGCCAGTCACCATCTCTATG +
Preference number: 5 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHSCQGL*PVTISM
Trigger: CATAGAGATGGTGACTGGCAAGAGGCCTTGGCATGA...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTCATGCCAAGGCCTCTaGCCAGTCACCATCTCTATG +
Preference number: 5 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQSCQGL*PVTISM
Trigger: CATAGAGATGGTGACTGGCAAGAGGCCTTGGCATGA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACTTAATCTTTCAGGGATaGGTGGCTTATGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYLIFQG*VAYVPS
Trigger: GGATGGGACATAAGCCACCAATCCCTGAAAGATTAA...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGACCTCCAGAGGGCCTTTaGCCACATCAGACAAACAGG +
Preference number: 5 (lower is better)
Translates to: KHYADVTVLSRARHGGDRPPEGL*PHQTNR
Trigger: CCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGG...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGCCTCCAGAGGGCCTTTaGCCACATCAGACAAACAGG +
Preference number: 5 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRPPEGL*PHQTNR
Trigger: CCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGG...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp ATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCAAGGCACATCCCTGCTTCGAGTaGTCCTGTCTTTCTGGATGG +
Preference number: 5 (lower is better)
Translates to: MVEELAGGPSHLWVTLKAHPCFE*SCLSGW
Trigger: CCATCCAGAAAGACAGGACAACTCGAAGCAGGGATG...TGCCTTGAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS CCA 90 bp AACGCTGGAACCCCTGAATCCCTCTGGAGTGGGGATAATGAGGTGTaGGTTAGGAGGGTCACTATGGCATCGAGGTACCTTCATAGGACG +
Preference number: 5 (lower is better)
Translates to: NAGTPESLWSGDNEV*VRRVTMASRYLHRT
Trigger: CGTCCTATGAAGGTACCTCGATGCCATAGTGACCCTCCTAACCCACACCTCATTATCCCCACTCCAGAGGGATTCAGGGGTTCCAGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000543421.5
CDS-3UTR CAA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCTCCTCTGATGTTTGGTaGACATGCGTTTCATCTGTC +
Preference number: 5 (lower is better)
Translates to: LMSRFSVARDTEETEAMVSSDVW*TCVSSV
Trigger: GACAGATGAAACGCATGTCAACCAAACATCAGAGGA...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGACTGGAAGCTTAGCATaGCTACAGCCAAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRTGSLA*LQPRLR
Trigger: CCTCAGCCTTGGCTGTAGCAATGCTAAGCTTCCAGT...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTAGTAACCTACAATCTTaGTTCCAGGAGTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGSNLQS*FQEWLC
Trigger: GCAAAGCCACTCCTGGAACAAAGATTGTAGGTTACT...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTAGCCTCTCAAGCTTCTaGGATATGCAGTCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSSLSSF*DMQSRD
Trigger: GTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCT...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTATGAAGGTGGTGTCCTaGACAACTGCACATAATCTG +
Preference number: 5 (lower is better)
Translates to: ADVTVLSRARHGGDRGDGMKVVS*TTAHNL
Trigger: CAGATTATGTGCAGTTGTCAAGGACACCACCTTCAT...ACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACGCGGTCAATGGCATaGCTTATCCTGTTGCATAGC +
Preference number: 5 (lower is better)
Translates to: GQNTTLMSRFSVARDTEETRSMA*LILLHS
Trigger: GCTATGCAACAGGATAAGCAATGCCATTGACCGCGT...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCGTTCCCAACTTCTTCTaGTGGACCCACTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: AASLTSWPPALQRAFCHIVPNFF*WTHLNL
Trigger: GAGATTCAAGTGGGTCCACAAGAAGAAGTTGGGAAC...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAAATACCGAACCAGATaGGGGTGTTTGATGCCTTCG +
Preference number: 5 (lower is better)
Translates to: AASLTSWPPALQRAFCHIKYRTR*GCLMPS
Trigger: CGAAGGCATCAAACACCCCAATCTGGTTCGGTATTT...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTGCTCATGGAGGACGTaGATCGCAATGGTGATCTGC +
Preference number: 5 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRCSWRT*IAMVIC
Trigger: GCAGATCACCATTGCGATCAACGTCCTCCATGAGCA...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp ACAAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTGCTCATGGAGGACGTaGATCGCAATGGTGATCTGC +
Preference number: 5 (lower is better)
Translates to: TNEWSRSWLAVHLIFGSLCSWRT*IAMVIC
Trigger: GCAGATCACCATTGCGATCAACGTCCTCCATGAGCA...GAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCGAGGTAAGGAAGATATaGGCACCTTTAATGTCACGG +
Preference number: 5 (lower is better)
Translates to: LMSRFSVARDTEETEAMVEVRKI*APLMSR
Trigger: CCGTGACATTAAAGGTGCCAATATCTTCCTTACCTC...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCTTAATCTTTCAGGGATaGGTGGCTTATGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: LMSRFSVARDTEETEAMVLIFQG*VAYVPS
Trigger: GGATGGGACATAAGCCACCAATCCCTGAAAGATTAA...GACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 90 bp CTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCATaGCCTTCAGCTCCTCCCACGACACAGCACTGCATTTCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LGRELGRQVRMKVNP*PSAPPTTQHCISPQ
Trigger: CTGAGGAGAAATGCAGTGCTGTGTCGTGGGAGGAGCTGAAGGCCATGGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000542952.5
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCTCCTCTGATGTTTGGTaGACATGCGTTTCATCTGTC +
Preference number: 5 (lower is better)
Translates to: AASLTSWPPALQRAFCHISSDVW*TCVSSV
Trigger: GACAGATGAAACGCATGTCAACCAAACATCAGAGGA...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACGATGCTCATGATGTGTaGAGTAACCTACAATCTTTG +
Preference number: 5 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYDAHDV*SNLQSL
Trigger: CAAAGATTGTAGGTTACTCAACACATCATGAGCATC...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAAGCCTCTCAAGCTTCTaGGATATGCAGTCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLSLSSF*DMQSRD
Trigger: GTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCT...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGGCAAATCCAAGTGCTTaGGAAGCCCTTTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRANPSA*EALSLA
Trigger: AGCCAGAGAAAGGGCTTCCAAAGCACTTGGATTTGC...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGCAAATCCAAGTGCTTaGGAAGCCCTTTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: KHYADVTVLSRARHGGDRANPSA*EALSLA
Trigger: AGCCAGAGAAAGGGCTTCCAAAGCACTTGGATTTGC...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAGCAAATCCAAGTGCTTaGGAAGCCCTTTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTANPSA*EALSLA
Trigger: AGCCAGAGAAAGGGCTTCCAAAGCACTTGGATTTGC...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAACGCGGTCAATGGCATaGCTTATCCTGTTGCATAGC +
Preference number: 5 (lower is better)
Translates to: KHYADVTVLSRARHGGDRTRSMA*LILLHS
Trigger: GCTATGCAACAGGATAAGCAATGCCATTGACCGCGT...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCTGTACCCCTGAATCATaGCTTCTCGGTAGTACTGTT +
Preference number: 5 (lower is better)
Translates to: AASLTSWPPALQRAFCHICTPES*LLGSTV
Trigger: AACAGTACTACCGAGAAGCAATGATTCAGGGGTACA...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTCGCCCACCTGGGTCTaGTACCTCTACCACTCTCAC +
Preference number: 5 (lower is better)
Translates to: LNLERSKHYADVTVLSRASPTWV*YLYHSH
Trigger: GTGAGAGTGGTAGAGGTACAAGACCCAGGTGGGCGA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCAATCGCCCACCTGGGTCTaGTACCTCTACCACTCTCAC +
Preference number: 5 (lower is better)
Translates to: HQLLNTQERWFSSRSLLQSPTWV*YLYHSH
Trigger: GTGAGAGTGGTAGAGGTACAAGACCCAGGTGGGCGA...TTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGTTCCCAACTTCTTCTaGTGGACCCACTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNVPNFF*WTHLNL
Trigger: GAGATTCAAGTGGGTCCACAAGAAGAAGTTGGGAAC...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp ATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTTCGTCTGCAGTTTCCTaGATAGTCTTATGGTCATTA +
Preference number: 5 (lower is better)
Translates to: MTTHPRLQMSAARPWPSPSSAVS*IVLWSL
Trigger: TAATGACCATAAGACTATCAAGGAAACTGCAGACGA...AGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp ATGACAACACACCCCAGACTCCAGATGTCGGCCGCACGCCCATGGCCCTCTCCTCCAAAATCTCCCAGTTaGATTAATCCAGATGAGGTA +
Preference number: 5 (lower is better)
Translates to: MTTHPRLQMSAARPWPSPPKSPS*INPDEV
Trigger: TACCTCATCTGGATTAATCAAACTGGGAGATTTTGG...AGGAGAGGGCCATGGGCGTGCGGCCGACATCTGGAGTCTGGGGTGTGTTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTCATGCCAAGGCCTCTaGCCAGTCACCATCTCTATG +
Preference number: 5 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTSCQGL*PVTISM
Trigger: CATAGAGATGGTGACTGGCAAGAGGCCTTGGCATGA...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCATGCCAAGGCCTCTaGCCAGTCACCATCTCTATG +
Preference number: 5 (lower is better)
Translates to: QGLLPVTISMTTHPRLQMSCQGL*PVTISM
Trigger: CATAGAGATGGTGACTGGCAAGAGGCCTTGGCATGA...CATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATTCATCTGTGCAAACCTaGACAAACGAATGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHSSVQT*TNEWSR
Trigger: CCTCGACCATTCGTTTGTCAAGGTTTGCACAGATGA...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTGCACTGCTGATGGATTaGGGCAGCACAGAGTCACCA +
Preference number: 5 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSALLMD*GSTESP
Trigger: TGGTGACTCTGTGCTGCCCAAATCCATCAGCAGTGC...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGTCCTCTGATGTTTGGTaGACATGCGTTTCATCTGTC +
Preference number: 5 (lower is better)
Translates to: NTTLMSRFSVARDTEETESSDVW*TCVSSV
Trigger: GACAGATGAAACGCATGTCAACCAAACATCAGAGGA...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACACTGGAAGCTTAGCATaGCTACAGCCAAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNTGSLA*LQPRLR
Trigger: CCTCAGCCTTGGCTGTAGCAATGCTAAGCTTCCAGT...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAGTTCCAGGAGTGGCTTaGCACTGCCCTTCTACTGAA +
Preference number: 5 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLVPGVA*HCPSTE
Trigger: TTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAAC...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTGTTCCAGGAGTGGCTTaGCACTGCCCTTCTACTGAA +
Preference number: 5 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLVPGVA*HCPSTE
Trigger: TTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAAC...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCATGTCTGATAAATTCTaGATGCCCAAAACAGTGCCC +
Preference number: 5 (lower is better)
Translates to: AASLTSWPPALQRAFCHIMSDKF*MPKTVP
Trigger: GGGCACTGTTTTGGGCATCAAGAATTTATCAGACAT...GATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGATGAAGGTGGTGTCCTaGACAACTGCACATAATCTG +
Preference number: 5 (lower is better)
Translates to: NTTLMSRFSVARDTEETEMKVVS*TTAHNL
Trigger: CAGATTATGTGCAGTTGTCAAGGACACCACCTTCAT...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACTTTCCTGCAGCTGCATaGAGTAACTGCAAAATAATA +
Preference number: 5 (lower is better)
Translates to: HGSQSRETRRRQRRWSVYFPAAA*SNCKII
Trigger: TATTATTTTGCAGTTACTCAATGCAGCTGCAGGAAA...GTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGCGTCATCTGAATCTTTaGAACAGTCCTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: NTTLMSRFSVARDTEETERHLNL*NSPFLQ
Trigger: CTGCAGGAAAGGACTGTTCAAAAGATTCAGATGACG...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGCATTGCTTATCCTGTaGCATAGCTCCAATGCATCA +
Preference number: 5 (lower is better)
Translates to: NTTLMSRFSVARDTEETEALLIL*HSSNAS
Trigger: TGATGCATTGGAGCTATGCAACAGGATAAGCAATGC...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGAGCATTGCTTATCCTGTaGCATAGCTCCAATGCATCA +
Preference number: 5 (lower is better)
Translates to: ASLTSWPPALQRAFCHIRALLIL*HSSNAS
Trigger: TGATGCATTGGAGCTATGCAACAGGATAAGCAATGC...TCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGTTCTCGGTAGTACTGTaGCAAGGTGACAGATTCAGA +
Preference number: 5 (lower is better)
Translates to: NTTLMSRFSVARDTEETEFSVVL*QGDRFR
Trigger: TCTGAATCTGTCACCTTGCAACAGTACTACCGAGAA...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATTTCTTGTGGACCCACTaGAATCTCCTCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHFLWTH*NLLLDM
Trigger: CATATCCAAGAGGAGATTCAAGTGGGTCCACAAGAA...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGGTTCCCAACTTCTTCTaGTGGACCCACTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRVPNFF*WTHLNL
Trigger: GAGATTCAAGTGGGTCCACAAGAAGAAGTTGGGAAC...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTGCTCATGGAGGACGTaGATCGCAATGGTGATCTGC +
Preference number: 5 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLCSWRT*IAMVIC
Trigger: GCAGATCACCATTGCGATCAACGTCCTCCATGAGCA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTTCATGCCAAGGCCTCTaGCCAGTCACCATCTCTATG +
Preference number: 5 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSSCQGL*PVTISM
Trigger: CATAGAGATGGTGACTGGCAAGAGGCCTTGGCATGA...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACTCATGCCAAGGCCTCTaGCCAGTCACCATCTCTATG +
Preference number: 5 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNSCQGL*PVTISM
Trigger: CATAGAGATGGTGACTGGCAAGAGGCCTTGGCATGA...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATTTAATCTTTCAGGGATaGGTGGCTTATGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHLIFQG*VAYVPS
Trigger: GGATGGGACATAAGCCACCAATCCCTGAAAGATTAA...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS GCA 90 bp AGTCAGACAATGTCTACTAAAGCCTGCTTCTGTGCTCCAGTCTGGTaGTCCCCAGCCAAGAGAATCATCCTCAGATTCGAGCCTCTCAAG +
Preference number: 5 (lower is better)
Translates to: SQTMSTKACFCAPVW*SPAKRIILRFEPLK
Trigger: CTTGAGAGGCTCGAATCTGAGGATGATTCTCTTGGCTGGGGAGCACCAGACTGGAGCACAGAAGCAGGCTTTAGTAGACATTGTCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 90 bp TCAGATTCGAGCCTCTCAAGCTTCTTGGATATGCAGTCCCGCGACTaGATGTCGAAGCTGTTATCTATGGGCTGTCTGATTTCCGGTACC +
Preference number: 5 (lower is better)
Translates to: SDSSLSSFLDMQSRD*MSKLLSMGCLISGT
Trigger: GGTACCGGAAATCAGACAGCCCATAGATAACAGCTTCGACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCTCGAATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 90 bp CCCAGCCAAGAGAATCATCCTCAGATTCGAGCCTCTCAAGCTTCTTaGATATGCAGTCCCGCGACTGGATGTCGAAGCTGTTATCTATGG +
Preference number: 5 (lower is better)
Translates to: PSQENHPQIRASQAS*ICSPATGCRSCYLW
Trigger: CCATAGATAACAGCTTCGACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCTCGAATCTGAGGATGATTCTCTTGGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 90 bp AGAAGTCAGACAATGTCTACTAAAGCCTGCTTCTGTGCTCCAGTCTaGTGCTCCCCAGCCAAGAGAATCATCCTCAGATTCGAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: RSQTMSTKACFCAPV*CSPAKRIILRFEPL
Trigger: GAGAGGCTCGAATCTGAGGATGATTCTCTTGGCTGGGGAGCACCAGACTGGAGCACAGAAGCAGGCTTTAGTAGACATTGTCTGACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 90 bp ATGAAGGTGGTGTCCTTGACAACTGCACATAATCTGAACCCCACATaGGATCTGGAAATTCAGAAAACTCGCCGCCAAGCAGCACTCGGG +
Preference number: 5 (lower is better)
Translates to: MKVVSLTTAHNLNPT*DLEIQKTRRQAALG
Trigger: CCCGAGTGCTGCTTGGCGGCGAGTTTTCTGAATTTCCAGATCCCATGTGGGGTTCAGATTATGTGCAGTTGTCAAGGACACCACCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542952.5
CDS-3UTR CAA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGACTGGAAGCTTAGCATaGCTACAGCCAAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LNLERSKHYADVTVLSRATGSLA*LQPRLR
Trigger: CCTCAGCCTTGGCTGTAGCAATGCTAAGCTTCCAGT...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAACTGGAAGCTTAGCATaGCTACAGCCAAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: NLERSKHYADVTVLSRARTGSLA*LQPRLR
Trigger: CCTCAGCCTTGGCTGTAGCAATGCTAAGCTTCCAGT...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGAGTAACCTACAATCTTaGTTCCAGGAGTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRSNLQS*FQEWLC
Trigger: GCAAAGCCACTCCTGGAACAAAGATTGTAGGTTACT...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATATGTCTGATAAATTCTaGATGCCCAAAACAGTGCCC +
Preference number: 5 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNMSDKF*MPKTVP
Trigger: GGGCACTGTTTTGGGCATCAAGAATTTATCAGACAT...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTATCAAAAGCGTCAATGTaGCAGTCGGGCTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLSKASM*QSGFSK
Trigger: CTTGGAGAAGCCCGACTGCAACATTGACGCTTTTGA...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTTCAAAAGCGTCAATGTaGCAGTCGGGCTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: RQTGAAGEVTLVTCAVFSSKASM*QSGFSK
Trigger: CTTGGAGAAGCCCGACTGCAACATTGACGCTTTTGA...ACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCGCATTGCTTATCCTGTaGCATAGCTCCAATGCATCA +
Preference number: 5 (lower is better)
Translates to: KRMVEELAGGPSHLWVTLALLIL*HSSNAS
Trigger: TGATGCATTGGAGCTATGCAACAGGATAAGCAATGC...GAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACACGCGGTCAATGGCATaGCTTATCCTGTTGCATAGC +
Preference number: 5 (lower is better)
Translates to: LERSKHYADVTVLSRARHTRSMA*LILLHS
Trigger: GCTATGCAACAGGATAAGCAATGCCATTGACCGCGT...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTCACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCACGCGGTCAATGGCATaGCTTATCCTGTTGCATAGC +
Preference number: 5 (lower is better)
Translates to: LTSCLILKRDGSPAGLCSTRSMA*LILLHS
Trigger: GCTATGCAACAGGATAAGCAATGCCATTGACCGCGT...GGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGCACTTGAATCTCCTCTaGGATATGCTGGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRHLNLL*DMLVHL
Trigger: GAGATGAACCAGCATATCCAAGAGGAGATTCAAGTG...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGATTCTTGTGGACCCACTaGAATCTCCTCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: KHYADVTVLSRARHGGDRFLWTH*NLLLDM
Trigger: CATATCCAAGAGGAGATTCAAGTGGGTCCACAAGAA...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TCTCACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCTGCTCATGGAGGACGTaGATCGCAATGGTGATCTGC +
Preference number: 5 (lower is better)
Translates to: SHQLLNTQERWFSSRSLLCSWRT*IAMVIC
Trigger: GCAGATCACCATTGCGATCAACGTCCTCCATGAGCA...GAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAATCTTTCAGGGATaGGTGGCTTATGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRLIFQG*VAYVPS
Trigger: GGATGGGACATAAGCCACCAATCCCTGAAAGATTAA...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTCATCTGTGCAAACCTaGACAAACGAATGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTSSVQT*TNEWSR
Trigger: CCTCGACCATTCGTTTGTCAAGGTTTGCACAGATGA...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGGGTGCTGTTCACTTCACCAGGCATGGTCTGGGCATTGTTTTTGAGCTTTACTCCTCCAGAGGGCCTTTaGCCACATCAGACAAACAGG +
Preference number: 5 (lower is better)
Translates to: RVLFTSPGMVWALFLSFTPPEGL*PHQTNR
Trigger: CCTGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGG...AGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGAAGTGAACAGCACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGTCAGTAATCAGCCTTTaGCATTACAAACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SFFNLVATSPPEGLLPHQSVISL*HYKPAA
Trigger: AGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGA...CTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CAA 90 bp TGCAGCTTCTTTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATTCAGTAATCAGCCTTTaGCATTACAAACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: CSFFNLVATSPPEGLLPHSVISL*HYKPAA
Trigger: AGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGA...ATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAAAGAAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CAA 90 bp ATGACATTCAGAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTGCACTGCTGATGGATTaGGGCAGCACAGAGTCACCA +
Preference number: 5 (lower is better)
Translates to: MTFRRTRQRTRKAGSNEGALLMD*GSTESP
Trigger: TGGTGACTCTGTGCTGCCCAAATCCATCAGCAGTGC...ACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTCTGAATGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS GCA 90 bp CAAGAGAATCATCCTCAGATTCGAGCCTCTCAAGCTTCTTGGATATaGAGTCCCGCGACTGGATGTCGAAGCTGTTATCTATGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: QENHPQIRASQASWI*SPATGCRSCYLWAV
Trigger: GACAGCCCATAGATAACAGCTTCGACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCTCGAATCTGAGGATGATTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS GCA 90 bp ATGAAGGTAAATCCATGGCCTTCAGCTCCTCCCACGACACAGCACTaGATTTCTCCTCAGATGAAGGTGGTGTCCTTGACAACTGCACAT +
Preference number: 5 (lower is better)
Translates to: MKVNPWPSAPPTTQH*ISPQMKVVSLTTAH
Trigger: ATGTGCAGTTGTCAAGGACACCACCTTCATCTGAGGAGAAATGCAGTGCTGTGTCGTGGGAGGAGCTGAAGGCCATGGATTTACCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000542952.5
ENST00000544041.5
CDS CCA 90 bp ATTCTCCTTCTGTGTCATCACCCTCATACTCCGGCTCATTACCTTTaGATGGTCGAGGGGAAGGGATTTCAAACACTGGCCAGCCAATGT +
Preference number: 5 (lower is better)
Translates to: ILLLCHHPHTPAHYL*MVEGKGFQTLASQC
Trigger: ACATTGGCTGGCCAGTGTTTGAAATCCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGGAGTATGAGGGTGATGACACAGAAGGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTCCTCTGATGTTTGGTaGACATGCGTTTCATCTGTC +
Preference number: 5 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTSSDVW*TCVSSV
Trigger: GACAGATGAAACGCATGTCAACCAAACATCAGAGGA...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGAGTAACCTACAATCTTaGTTCCAGGAGTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKSNLQS*FQEWLC
Trigger: GCAAAGCCACTCCTGGAACAAAGATTGTAGGTTACT...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGGATGCTCATGATGTGTaGAGTAACCTACAATCTTTG +
Preference number: 5 (lower is better)
Translates to: NTTLMSRFSVARDTEETEDAHDV*SNLQSL
Trigger: CAAAGATTGTAGGTTACTCAACACATCATGAGCATC...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAATGTCTGATAAATTCTaGATGCCCAAAACAGTGCCC +
Preference number: 5 (lower is better)
Translates to: KHYADVTVLSRARHGGDRMSDKF*MPKTVP
Trigger: GGGCACTGTTTTGGGCATCAAGAATTTATCAGACAT...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGATGAAGGTGGTGTCCTaGACAACTGCACATAATCTG +
Preference number: 5 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKMKVVS*TTAHNL
Trigger: CAGATTATGTGCAGTTGTCAAGGACACCACCTTCAT...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCATGAAGGTGGTGTCCTaGACAACTGCACATAATCTG +
Preference number: 5 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTMKVVS*TTAHNL
Trigger: CAGATTATGTGCAGTTGTCAAGGACACCACCTTCAT...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TCTCTGGCTTCATGGAAGAGCTCCTTCAGGGCTCGACTGATCTCTATAACAGACGCAAATCCAAGTGCTTaGGAAGCCCTTTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: SLASWKSSFRARLISITDANPSA*EALSLA
Trigger: AGCCAGAGAAAGGGCTTCCAAAGCACTTGGATTTGC...GTCTGTTATAGAGATCAGTCGAGCCCTGAAGGAGCTCTTCCATGAAGCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTTTCTTGTGGACCCACTaGAATCTCCTCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSFLWTH*NLLLDM
Trigger: CATATCCAAGAGGAGATTCAAGTGGGTCCACAAGAA...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CCAAGGCCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATTTCTTGTGGACCCACTaGAATCTCCTCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: PRPLASHHLYDNTPQTPDFLWTH*NLLLDM
Trigger: CATATCCAAGAGGAGATTCAAGTGGGTCCACAAGAA...ATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGGCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTGTTCCCAACTTCTTCTaGTGGACCCACTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLVPNFF*WTHLNL
Trigger: GAGATTCAAGTGGGTCCACAAGAAGAAGTTGGGAAC...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTCGTCTGCAGTTTCCTaGATAGTCTTATGGTCATTA +
Preference number: 5 (lower is better)
Translates to: GQNTTLMSRFSVARDTEESSAVS*IVLWSL
Trigger: TAATGACCATAAGACTATCAAGGAAACTGCAGACGA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CAGTCGCGCGAGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATCCAAAATCTCCCAGTTaGATTAATCCAGATGAGGTA +
Preference number: 5 (lower is better)
Translates to: QSRETRRRQRRWSVYSSNPKSPS*INPDEV
Trigger: TACCTCATCTGGATTAATCAAACTGGGAGATTTTGG...ATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTCGCGCGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCGGCATGGTCTGGGCATaGTTTTTGAGCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTGMVWA*FLSFTE
Trigger: TTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCC...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CATGAACTGGTAGTACTGCTTCATCAGCAGGCCGCCCTTCAGGACCTCCTTACATTAATCTTTCAGGGATaGGTGGCTTATGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: HELVVLLHQQAALQDLLTLIFQG*VAYVPS
Trigger: GGATGGGACATAAGCCACCAATCCCTGAAAGATTAA...TGTAAGGAGGTCCTGAAGGGCGGCCTGCTGATGAAGCAGTACTACCAGTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACTCAGATTCAGGACTCTaGCAAGCTGAATCTCCCAAT +
Preference number: 5 (lower is better)
Translates to: LERSKHYADVTVLSRARHSDSGL*QAESPN
Trigger: ATTGGGAGATTCAGCTTGCAAGAGTCCTGAATCTGA...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGTTCCAGGAGTGGCTTaGCACTGCCCTTCTACTGAA +
Preference number: 5 (lower is better)
Translates to: LLNLERSKHYADVTVLSRVPGVA*HCPSTE
Trigger: TTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAAC...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACAGATGCTCATGATGTGTaGAGTAACCTACAATCTTTG +
Preference number: 5 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTDAHDV*SNLQSL
Trigger: CAAAGATTGTAGGTTACTCAACACATCATGAGCATC...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGTGTCCTGGAAGTCTTTaGCAGCATATTTTTCATAGT +
Preference number: 5 (lower is better)
Translates to: GQNTTLMSRFSVARDTEECPGSL*QHIFHS
Trigger: ACTATGAAAAATATGCTGCAAAAGACTTCCAGGACA...CTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTATGAAGGTGGTGTCCTaGACAACTGCACATAATCTG +
Preference number: 5 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLMKVVS*TTAHNL
Trigger: CAGATTATGTGCAGTTGTCAAGGACACCACCTTCAT...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGAGTTTCCTGCAGCTGCATaGAGTAACTGCAAAATAATA +
Preference number: 5 (lower is better)
Translates to: NTTLMSRFSVARDTEETEFPAAA*SNCKII
Trigger: TATTATTTTGCAGTTACTCAATGCAGCTGCAGGAAA...CTCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTACGTCATCTGAATCTTTaGAACAGTCCTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLRHLNL*NSPFLQ
Trigger: CTGCAGGAAAGGACTGTTCAAAAGATTCAGATGACG...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGCATTGCTTATCCTGTaGCATAGCTCCAATGCATCA +
Preference number: 5 (lower is better)
Translates to: LERSKHYADVTVLSRARHALLIL*HSSNAS
Trigger: TGATGCATTGGAGCTATGCAACAGGATAAGCAATGC...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTCACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCGCATTGCTTATCCTGTaGCATAGCTCCAATGCATCA +
Preference number: 5 (lower is better)
Translates to: LTSCLILKRDGSPAGLCSALLIL*HSSNAS
Trigger: TGATGCATTGGAGCTATGCAACAGGATAAGCAATGC...GGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGTGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACTTCTCGGTAGTACTGTaGCAAGGTGACAGATTCAGA +
Preference number: 5 (lower is better)
Translates to: LERSKHYADVTVLSRARHFSVVL*QGDRFR
Trigger: TCTGAATCTGTCACCTTGCAACAGTACTACCGAGAA...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACCACTTGAATCTCCTCTaGGATATGCTGGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: LERSKHYADVTVLSRARHHLNLL*DMLVHL
Trigger: GAGATGAACCAGCATATCCAAGAGGAGATTCAAGTG...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TCTCTGGCTTCATGGAAGAGCTCCTTCAGGGCTCGACTGATCTCTATAACAGACGTTCCCAACTTCTTCTaGTGGACCCACTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: SLASWKSSFRARLISITDVPNFF*WTHLNL
Trigger: GAGATTCAAGTGGGTCCACAAGAAGAAGTTGGGAAC...GTCTGTTATAGAGATCAGTCGAGCCCTGAAGGAGCTCTTCCATGAAGCCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp TTAACCTCGTGGCCACCAGCCCTCCAGAGGGCCTTTTGCCACATCAGACAAACATCGTCTGCAGTTTCCTaGATAGTCTTATGGTCATTA +
Preference number: 5 (lower is better)
Translates to: LTSWPPALQRAFCHIRQTSSAVS*IVLWSL
Trigger: TAATGACCATAAGACTATCAAGGAAACTGCAGACGA...TGTTTGTCTGATGTGGCAAAAGGCCCTCTGGAGGGCTGGTGGCCACGAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGATCGTCTGCAGTTTCCTaGATAGTCTTATGGTCATTA +
Preference number: 5 (lower is better)
Translates to: KHYADVTVLSRARHGGDRSSAVS*IVLWSL
Trigger: TAATGACCATAAGACTATCAAGGAAACTGCAGACGA...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AACCTCCTGCAGCATGAACTGGTAGTACTGCTTCATCAGCAGGCCGCCCTTCAGTCGTCTGCAGTTTCCTaGATAGTCTTATGGTCATTA +
Preference number: 5 (lower is better)
Translates to: NLLQHELVVLLHQQAALQSSAVS*IVLWSL
Trigger: TAATGACCATAAGACTATCAAGGAAACTGCAGACGA...CTGAAGGGCGGCCTGCTGATGAAGCAGTACTACCAGTTCATGCTGCAGGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCACCAGATTGGGGTGTTaGATGCCTTCGAATATTTTC +
Preference number: 5 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTTRLGC*MPSNIF
Trigger: GAAAATATTCGAAGGCATCAAACACCCCAATCTGGT...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAAAATACCGAACCAGATaGGGGTGTTTGATGCCTTCG +
Preference number: 5 (lower is better)
Translates to: NLERSKHYADVTVLSRARKYRTR*GCLMPS
Trigger: CGAAGGCATCAAACACCCCAATCTGGTTCGGTATTT...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAGAGGTAAGGAAGATATaGGCACCTTTAATGTCACGG +
Preference number: 5 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLEVRKI*APLMSR
Trigger: CCGTGACATTAAAGGTGCCAATATCTTCCTTACCTC...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGACCAAAATCTCCCAGTTaGATTAATCCAGATGAGGTA +
Preference number: 5 (lower is better)
Translates to: KHYADVTVLSRARHGGDRPKSPS*INPDEV
Trigger: TACCTCATCTGGATTAATCAAACTGGGAGATTTTGG...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AAACGAATGGTCGAGGAGCTGGCTGGCGGTCCATCTCATCTTTGGGTCACTCTCCCAAAATCTCCCAGTTaGATTAATCCAGATGAGGTA +
Preference number: 5 (lower is better)
Translates to: KRMVEELAGGPSHLWVTLPKSPS*INPDEV
Trigger: TACCTCATCTGGATTAATCAAACTGGGAGATTTTGG...GAGAGTGACCCAAAGATGAGATGGACCGCCAGCCAGCTCCTCGACCATTCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCATGGCCGGCATGGTCTGGGCATaGTTTTTGAGCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: RTRQRTRKAGSNEGKSMAGMVWA*FLSFTE
Trigger: TTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCC...GGCCATGGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGCATGGTCTGGGCATaGTTTTTGAGCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: LERSKHYADVTVLSRARHGMVWA*FLSFTE
Trigger: TTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCC...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTCATCTGTGCAAACCTaGACAAACGAATGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: LNLERSKHYADVTVLSRASSVQT*TNEWSR
Trigger: CCTCGACCATTCGTTTGTCAAGGTTTGCACAGATGA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGTCAGTAATCAGCCTTTaGCATTACAAACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: RSSRRSDACHLCSLQSWKSVISL*HYKPAA
Trigger: AGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGA...CTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS GCA 90 bp TGGGATCTGGAAATTCAGAAAACTGTGACCTGCAAGCCCCATCCCTaGTTCGAGTTGTCCTGTCTTTCTGGATGGAACCAATGTACATCT +
Preference number: 5 (lower is better)
Translates to: WDLEIQKTVTCKPHP*FELSCLSGWNQCTS
Trigger: AGATGTACATTGGTTCCATCCAGAAAGACAGGACAACTCGAAGCAGGGATGGGGCTTGCAGGTCACAGTTTTCTGAATTTCCAGATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGTAACCTACAATCTTaGTTCCAGGAGTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: LNLERSKHYADVTVLSRASNLQS*FQEWLC
Trigger: GCAAAGCCACTCCTGGAACAAAGATTGTAGGTTACT...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCCTTTTGCCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCGATGCTCATGATGTGTaGAGTAACCTACAATCTTTG +
Preference number: 5 (lower is better)
Translates to: AFCHIRQTGAAGEVTLVTDAHDV*SNLQSL
Trigger: CAAAGATTGTAGGTTACTCAACACATCATGAGCATC...GGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGGCAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTGTCCTGGAAGTCTTTaGCAGCATATTTTTCATAGT +
Preference number: 5 (lower is better)
Translates to: GAAGEVTLVTCAVFSLGRCPGSL*QHIFHS
Trigger: ACTATGAAAAATATGCTGCAAAAGACTTCCAGGACA...CCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CCTCTTGCCAGTCACCATCTCTATGACAACACACCCCAGACTCCAGATGTCGGCTGTCCTGGAAGTCTTTaGCAGCATATTTTTCATAGT +
Preference number: 5 (lower is better)
Translates to: PLASHHLYDNTPQTPDVGCPGSL*QHIFHS
Trigger: ACTATGAAAAATATGCTGCAAAAGACTTCCAGGACA...GCCGACATCTGGAGTCTGGGGTGTGTTGTCATAGAGATGGTGACTGGCAAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACATGTCTGATAAATTCTaGATGCCCAAAACAGTGCCC +
Preference number: 5 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNMSDKF*MPKTVP
Trigger: GGGCACTGTTTTGGGCATCAAGAATTTATCAGACAT...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CAAGGCAGTGAGAAAGGAAGTCCTTTCCTTCAGGGCTTAATCTTTCAGGGATTGGCAAATCCAAGTGCTTaGGAAGCCCTTTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: QGSEKGSPFLQGLIFQGLANPSA*EALSLA
Trigger: AGCCAGAGAAAGGGCTTCCAAAGCACTTGGATTTGC...CAATCCCTGAAAGATTAAGCCCTGAAGGAAAGGACTTCCTTTCTCACTGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GATGACCGGCTGACTGGATGTCTGCTCCTGGCACAGAGTCATAAGTCCCTCAATCCAGGAATTTGCACCTaGACATACTGTTTTGATTTC +
Preference number: 5 (lower is better)
Translates to: DDRLTGCLLLAQSHKSLNPGICT*TYCFDF
Trigger: GAAATCAAAACAGTATGTCAAGGTGCAAATTCCTGG...ATTGAGGGACTTATGACTCTGTGCCAGGAGCAGACATCCAGTCAGCCGGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp AAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACGGAGGAGACAGATTTCCTGCAGCTGCATaGAGTAACTGCAAAATAATA +
Preference number: 5 (lower is better)
Translates to: KHYADVTVLSRARHGGDRFPAAA*SNCKII
Trigger: TATTATTTTGCAGTTACTCAATGCAGCTGCAGGAAA...TCTGTCTCCTCCGTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCACGCGGTCAATGGCATaGCTTATCCTGTTGCATAGC +
Preference number: 5 (lower is better)
Translates to: LLNLERSKHYADVTVLSRTRSMA*LILLHS
Trigger: GCTATGCAACAGGATAAGCAATGCCATTGACCGCGT...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGATTCTCGGTAGTACTGTaGCAAGGTGACAGATTCAGA +
Preference number: 5 (lower is better)
Translates to: NLERSKHYADVTVLSRARFSVVL*QGDRFR
Trigger: TCTGAATCTGTCACCTTGCAACAGTACTACCGAGAA...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGTGTACCCCTGAATCATaGCTTCTCGGTAGTACTGTT +
Preference number: 5 (lower is better)
Translates to: LNLERSKHYADVTVLSRACTPES*LLGSTV
Trigger: AACAGTACTACCGAGAAGCAATGATTCAGGGGTACA...CGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCATGGTGTACCCCTGAATCATaGCTTCTCGGTAGTACTGTT +
Preference number: 5 (lower is better)
Translates to: EGLGRELGRQVRMKVNPWCTPES*LLGSTV
Trigger: AACAGTACTACCGAGAAGCAATGATTCAGGGGTACA...CCATGGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp GATTGGTGGCTTATGTCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCTCGCCCACCTGGGTCTaGTACCTCTACCACTCTCAC +
Preference number: 5 (lower is better)
Translates to: DWWLMSHPHFIHNLKVVLSPTWV*YLYHSH
Trigger: GTGAGAGTGGTAGAGGTACAAGACCCAGGTGGGCGA...GAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGACATAAGCCACCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCGCTCCTCCGTGGGGCTaGAGTGACGACTCAGGGACC +
Preference number: 5 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSAPPWG*SDDSGT
Trigger: GGTCCCTGAGTCGTCACTCAAGCCCCACGGAGGAGC...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CAA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACTTGAATCTCCTCTaGGATATGCTGGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: NLERSKHYADVTVLSRARHLNLL*DMLVHL
Trigger: GAGATGAACCAGCATATCCAAGAGGAGATTCAAGTG...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAACCAGATTGGGGTGTTaGATGCCTTCGAATATTTTC +
Preference number: 5 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLTRLGC*MPSNIF
Trigger: GAAAATATTCGAAGGCATCAAACACCCCAATCTGGT...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACACCAGATTGGGGTGTTaGATGCCTTCGAATATTTTC +
Preference number: 5 (lower is better)
Translates to: LERSKHYADVTVLSRARHTRLGC*MPSNIF
Trigger: GAAAATATTCGAAGGCATCAAACACCCCAATCTGGT...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCTGCTCATGGAGGACGTaGATCGCAATGGTGATCTGC +
Preference number: 5 (lower is better)
Translates to: FTVSALNKQEIKNKVWDACSWRT*IAMVIC
Trigger: GCAGATCACCATTGCGATCAACGTCCTCCATGAGCA...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GAAGGACTCGGCAGAGAACTAGGAAGGCAGGTTCGAATGAAGGTAAATCCATGGGAGGTAAGGAAGATATaGGCACCTTTAATGTCACGG +
Preference number: 5 (lower is better)
Translates to: EGLGRELGRQVRMKVNPWEVRKI*APLMSR
Trigger: CCGTGACATTAAAGGTGCCAATATCTTCCTTACCTC...CCATGGATTTACCTTCATTCGAACCTGCCTTCCTAGTTCTCTGCCGAGTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp AACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGAGGCATGGTCTGGGCATaGTTTTTGAGCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: NLERSKHYADVTVLSRARGMVWA*FLSFTE
Trigger: TTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCC...TCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 90 bp TCCTCTGATGTTTGGTTGACATGCGTTTCATCTGTCGAGGTGTGCTaGGGGGAGAGGTACCATAAAGATTCTCTGTATTTGTTTCATCGG +
Preference number: 5 (lower is better)
Translates to: SSDVWLTCVSSVEVC*GERYHKDSLYLFHR
Trigger: CCGATGAAACAAATACAGAGAATCTTTATGGTACCTCTCCCCCCAGCACACCTCGACAGATGAAACGCATGTCAACCAAACATCAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000448119.2
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTAGATGCTCATGATGTGTaGAGTAACCTACAATCTTTG +
Preference number: 5 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLDAHDV*SNLQSL
Trigger: CAAAGATTGTAGGTTACTCAACACATCATGAGCATC...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCGCAAATCCAAGTGCTTaGGAAGCCCTTTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAANPSA*EALSLA
Trigger: AGCCAGAGAAAGGGCTTCCAAAGCACTTGGATTTGC...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGACACGGAGGAGACAGAGGCGATGGTCCGTGTACAGTAGTAATGGCACTTAACCCAGGAATTTGCACCTaGACATACTGTTTTGATTTC +
Preference number: 5 (lower is better)
Translates to: RHGGDRGDGPCTVVMALNPGICT*TYCFDF
Trigger: GAAATCAAAACAGTATGTCAAGGTGCAAATTCCTGG...GTTAAGTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CCACATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTTTTCCTGCAGCTGCATaGAGTAACTGCAAAATAATA +
Preference number: 5 (lower is better)
Translates to: PHQTNRSSRRSDACHLCSFPAAA*SNCKII
Trigger: TATTATTTTGCAGTTACTCAATGCAGCTGCAGGAAA...ACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTCAGTCTTGGAAGGTTATCGTCTGCAGTTTCCTaGATAGTCTTATGGTCATTA +
Preference number: 5 (lower is better)
Translates to: AAGEVTLVTCAVFSLGRLSSAVS*IVLWSL
Trigger: TAATGACCATAAGACTATCAAGGAAACTGCAGACGA...TAACCTTCCAAGACTGAAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCGAGACACCCAAAATCTCCCAGTTaGATTAATCCAGATGAGGTA +
Preference number: 5 (lower is better)
Translates to: LERSKHYADVTVLSRARHPKSPS*INPDEV
Trigger: TACCTCATCTGGATTAATCAAACTGGGAGATTTTGG...GTGTCTCGCGCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCCATGGCCCTCTCCTTaGGCACGAGTGATGACTTCA +
Preference number: 5 (lower is better)
Translates to: LQLLLNLERSKHYADVTVPWPSP*ARVMTS
Trigger: TGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCATGGCCCTCTCCTTaGGCACGAGTGATGACTTCA +
Preference number: 5 (lower is better)
Translates to: SHPHFIHNLKVVLILMPRPWPSP*ARVMTS
Trigger: TGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG...CCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AATCTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTCGGCAGAGAACTACTGGAAGCTTAGCATaGCTACAGCCAAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: NLNFRHSCMTFRRTRQRTTGSLA*LQPRLR
Trigger: CCTCAGCCTTGGCTGTAGCAATGCTAAGCTTCCAGT...AGTTCTCTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAGATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp ACTATGCCATGCTCATGGAGGACGTTGATCGCAATGGTGATCTGCTTTGAATACAGTAACCTACAATCTTaGTTCCAGGAGTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: TMPCSWRTLIAMVICFEYSNLQS*FQEWLC
Trigger: GCAAAGCCACTCCTGGAACAAAGATTGTAGGTTACT...GTATTCAAAGCAGATCACCATTGCGATCAACGTCCTCCATGAGCATGGCATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTTCCTATGACATGGCCAATGCATTCATTCATCAAGGCTTGTAAACTCAAGAAGAGCCTCTCAAGCTTCTaGGATATGCAGTCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: FPMTWPMHSFIKACKLKKSLSSF*DMQSRD
Trigger: GTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCT...CTTCTTGAGTTTACAAGCCTTGATGAATGAATGCATTGGCCATGTCATAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTTCAAAAGCGTCAATGTaGCAGTCGGGCTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: LLLNLERSKHYADVTVLSSKASM*QSGFSK
Trigger: CTTGGAGAAGCCCGACTGCAACATTGACGCTTTTGA...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CATCAGACAAACAGGAGCAGCAGGAGAAGTGACGCTTGTCACCTGTGCAGTCTTTTTCCTGCAGCTGCATaGAGTAACTGCAAAATAATA +
Preference number: 5 (lower is better)
Translates to: HQTNRSSRRSDACHLCSLFPAAA*SNCKII
Trigger: TATTATTTTGCAGTTACTCAATGCAGCTGCAGGAAA...AAGACTGCACAGGTGACAAGCGTCACTTCTCCTGCTGCTCCTGTTTGTCTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCCGTCATCTGAATCTTTaGAACAGTCCTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LLNLERSKHYADVTVLSRRHLNL*NSPFLQ
Trigger: CTGCAGGAAAGGACTGTTCAAAAGATTCAGATGACG...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCGCATTGCTTATCCTGTaGCATAGCTCCAATGCATCA +
Preference number: 5 (lower is better)
Translates to: LLNLERSKHYADVTVLSRALLIL*HSSNAS
Trigger: TGATGCATTGGAGCTATGCAACAGGATAAGCAATGC...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATCCATGGCCCTCTCCTTaGGCACGAGTGATGACTTCA +
Preference number: 5 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYPWPSP*ARVMTS
Trigger: TGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCTCATCTGTGCAAACCTaGACAAACGAATGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: FTVSALNKQEIKNKVWDASSVQT*TNEWSR
Trigger: CCTCGACCATTCGTTTGTCAAGGTTTGCACAGATGA...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS TCA 90 bp ACCTACAATCTTTGTTCCAGGAGTGGCTTTGCACTGCCCTTCTACTaGAGTACCATTAAAACCAGCTCTATCTCTAACAAAGGCGAAGCT +
Preference number: 5 (lower is better)
Translates to: TYNLCSRSGFALPFY*STIKTSSISNKGEA
Trigger: AGCTTCGCCTTTGTTAGAGATAGAGCTGGTTTTAATGGTACTTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAACAAAGATTGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS GCA 90 bp GCTGTATATAAAAAGAAGTCCTGGTCGTTAATTGTCCGTCCTGCATaGCAGGCTTGTAGCTCTAACCAGATCAGTTCGTTAGATCGGTTA +
Preference number: 5 (lower is better)
Translates to: AVYKKKSWSLIVRPA*QACSSNQISSLDRL
Trigger: TAACCGATCTAACGAACTGATCTGGTTAGAGCTACAAGCCTGGCATGCAGGACGGACAATTAACGACCAGGACTTCTTTTTATATACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS GCA 90 bp TACAAATGGTCTATAAATAGAAGTCAGACAATGTCTACTAAAGCCTaGTTCTGTGCTCCAGTCTGGTGCTCCCCAGCCAAGAGAATCATC +
Preference number: 5 (lower is better)
Translates to: YKWSINRSQTMSTKA*FCAPVWCSPAKRII
Trigger: GATGATTCTCTTGGCTGGGGAGCACCAGACTGGAGCACAGAAGCAGGCTTTAGTAGACATTGTCTGACTTCTATTTATAGACCATTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 90 bp ATGAAGGTGGTGTCCTTGACAACTGCACATAATCTGAACCCCACATaGGATCTGGAAATTCAGAAAACTCCACTGGACGATCGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: MKVVSLTTAHNLNPT*DLEIQKTPLDDRSL
Trigger: TAAAGAACGATCGTCCAGTGGAGTTTTCTGAATTTCCAGATCCCATGTGGGGTTCAGATTATGTGCAGTTGTCAAGGACACCACCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000544041.5
CDS-3UTR CAA 90 bp TCTCCAGCAGGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCAGTAACCTACAATCTTaGTTCCAGGAGTGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: SPAGLCSNLNFRHSCMTFSNLQS*FQEWLC
Trigger: GCAAAGCCACTCCTGGAACAAAGATTGTAGGTTACT...GAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp ACCAGCTGCTTAATACTCAAGAGAGATGGTTCTCCAGCAGGTCTCTGCTCCAATGATGCTCATGATGTGTaGAGTAACCTACAATCTTTG +
Preference number: 5 (lower is better)
Translates to: TSCLILKRDGSPAGLCSNDAHDV*SNLQSL
Trigger: CAAAGATTGTAGGTTACTCAACACATCATGAGCATC...ATTGGAGCAGAGACCTGCTGGAGAACCATCTCTCTTGAGTATTAAGCAGCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp CTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGCATGTCTGATAAATTCTaGATGCCCAAAACAGTGCCC +
Preference number: 5 (lower is better)
Translates to: LLNLERSKHYADVTVLSRMSDKF*MPKTVP
Trigger: GGGCACTGTTTTGGGCATCAAGAATTTATCAGACAT...GCGACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTTAACTTCAGACACTCATGTATGACATTCAGAAGGACTCGGCAGAGAACTAGGATGAAGGTGGTGTCCTaGACAACTGCACATAATCTG +
Preference number: 5 (lower is better)
Translates to: LNFRHSCMTFRRTRQRTRMKVVS*TTAHNL
Trigger: CAGATTATGTGCAGTTGTCAAGGACACCACCTTCAT...CCTAGTTCTCTGCCGAGTCCTTCTGAATGTCATACATGAGTGTCTGAAGTTAAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000542952.5
CDS-3UTR CAA 90 bp TCTCTGGCTTCATGGAAGAGCTCCTTCAGGGCTCGACTGATCTCTATAACAGACTTTCCTGCAGCTGCATaGAGTAACTGCAAAATAATA +
Preference number: 5 (lower is better)
Translates to: SLASWKSSFRARLISITDFPAAA*SNCKII
Trigger: TATTATTTTGCAGTTACTCAATGCAGCTGCAGGAAA...GTCTGTTATAGAGATCAGTCGAGCCCTGAAGGAGCTCTTCCATGAAGCCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTACGCGGTCAATGGCATaGCTTATCCTGTTGCATAGC +
Preference number: 5 (lower is better)
Translates to: LQLLLNLERSKHYADVTVTRSMA*LILLHS
Trigger: GCTATGCAACAGGATAAGCAATGCCATTGACCGCGT...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TCTCCAGCAGGTCTCTGCTCCAATCTTAACTTCAGACACTCATGTATGACATTCTTCTCGGTAGTACTGTaGCAAGGTGACAGATTCAGA +
Preference number: 5 (lower is better)
Translates to: SPAGLCSNLNFRHSCMTFFSVVL*QGDRFR
Trigger: TCTGAATCTGTCACCTTGCAACAGTACTACCGAGAA...GAATGTCATACATGAGTGTCTGAAGTTAAGATTGGAGCAGAGACCTGCTGGAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCTGTACCCCTGAATCATaGCTTCTCGGTAGTACTGTT +
Preference number: 5 (lower is better)
Translates to: FTVSALNKQEIKNKVWDACTPES*LLGSTV
Trigger: AACAGTACTACCGAGAAGCAATGATTCAGGGGTACA...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTCGCCCACCTGGGTCTaGTACCTCTACCACTCTCAC +
Preference number: 5 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSSPTWV*YLYHSH
Trigger: GTGAGAGTGGTAGAGGTACAAGACCCAGGTGGGCGA...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CAA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCGGCATGGTCTGGGCATaGTTTTTGAGCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAGMVWA*FLSFTE
Trigger: TTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCC...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTTCCTCTGATGTTTGGTaGACATGCGTTTCATCTGTC +
Preference number: 5 (lower is better)
Translates to: LLLNLERSKHYADVTVLSSSDVW*TCVSSV
Trigger: GACAGATGAAACGCATGTCAACCAAACATCAGAGGA...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTTCCTATGACATGGCCAATGCATTCATTCATCAAGGCTTGTAAACTCAAGAAGTCAAAAGCGTCAATGTaGCAGTCGGGCTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: FPMTWPMHSFIKACKLKKSKASM*QSGFSK
Trigger: CTTGGAGAAGCCCGACTGCAACATTGACGCTTTTGA...CTTCTTGAGTTTACAAGCCTTGATGAATGAATGCATTGGCCATGTCATAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTCGTCATCTGAATCTTTaGAACAGTCCTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LLLNLERSKHYADVTVLSRHLNL*NSPFLQ
Trigger: CTGCAGGAAAGGACTGTTCAAAAGATTCAGATGACG...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTGTTCCCAACTTCTTCTaGTGGACCCACTTGAATCTC +
Preference number: 5 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLVPNFF*WTHLNL
Trigger: GAGATTCAAGTGGGTCCACAAGAAGAAGTTGGGAAC...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTAAATACCGAACCAGATaGGGGTGTTTGATGCCTTCG +
Preference number: 5 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLKYRTR*GCLMPS
Trigger: CGAAGGCATCAAACACCCCAATCTGGTTCGGTATTT...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TCACCAGGCATGGTCTGGGCATTGTTTTTGAGCTTTACTGAACATCCAAAATCTGAGGTAAGGAAGATATaGGCACCTTTAATGTCACGG +
Preference number: 5 (lower is better)
Translates to: SPGMVWALFLSFTEHPKSEVRKI*APLMSR
Trigger: CCGTGACATTAAAGGTGCCAATATCTTCCTTACCTC...AGATTTTGGATGTTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCCTGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCCCATGGCCCTCTCCTTaGGCACGAGTGATGACTTCA +
Preference number: 5 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSPWPSP*ARVMTS
Trigger: TGAAGTCATCACTCGTGCCAAAGGAGAGGGCCATGG...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CAA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTTTAATCTTTCAGGGATaGGTGGCTTATGTCCCATCC +
Preference number: 5 (lower is better)
Translates to: LLLNLERSKHYADVTVLSLIFQG*VAYVPS
Trigger: GGATGGGACATAAGCCACCAATCCCTGAAAGATTAA...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTTCATCTGTGCAAACCTaGACAAACGAATGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: LQLLLNLERSKHYADVTVSSVQT*TNEWSR
Trigger: CCTCGACCATTCGTTTGTCAAGGTTTGCACAGATGA...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGTCCTCTGATGTTTGGTaGACATGCGTTTCATCTGTC +
Preference number: 5 (lower is better)
Translates to: SHPHFIHNLKVVLILMPRSSDVW*TCVSSV
Trigger: GACAGATGAAACGCATGTCAACCAAACATCAGAGGA...CCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTCACAGTCAGTGCACTCAACAAACAGGAGATTAAAAACAAGGTATGGGACGCCCCAGGAATTTGCACCTaGACATACTGTTTTGATTTC +
Preference number: 5 (lower is better)
Translates to: FTVSALNKQEIKNKVWDAPGICT*TYCFDF
Trigger: GAAATCAAAACAGTATGTCAAGGTGCAAATTCCTGG...GGCGTCCCATACCTTGTTTTTAATCTCCTGTTTGTTGAGTGCACTGACTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCGTCATCTGAATCTTTaGAACAGTCCTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LQLLLNLERSKHYADVTVRHLNL*NSPFLQ
Trigger: CTGCAGGAAAGGACTGTTCAAAAGATTCAGATGACG...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTTGTACCCCTGAATCATaGCTTCTCGGTAGTACTGTT +
Preference number: 5 (lower is better)
Translates to: PHFIHNLKVVLILMPRPLCTPES*LLGSTV
Trigger: AACAGTACTACCGAGAAGCAATGATTCAGGGGTACA...AAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCACTTGAATCTCCTCTaGGATATGCTGGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLHLNLL*DMLVHL
Trigger: GAGATGAACCAGCATATCCAAGAGGAGATTCAAGTG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CCCCACTTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTCACTTGAATCTCCTCTaGGATATGCTGGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: PHFIHNLKVVLILMPRPLHLNLL*DMLVHL
Trigger: GAGATGAACCAGCATATCCAAGAGGAGATTCAAGTG...AAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAAGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTGCCAGTAAATACCGAACCAGATaGGGGTGTTTGATGCCTTCG +
Preference number: 5 (lower is better)
Translates to: FIHNLKVVLILMPRPLASKYRTR*GCLMPS
Trigger: CGAAGGCATCAAACACCCCAATCTGGTTCGGTATTT...ACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTGAGGTAAGGAAGATATaGGCACCTTTAATGTCACGG +
Preference number: 5 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLEVRKI*APLMSR
Trigger: CCGTGACATTAAAGGTGCCAATATCTTCCTTACCTC...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS TCA 90 bp ACCAATGCTATACGTGCCCTTTGCAAGGAACCATCCATTAGCTTGTaGAGTCTTAAAATTAACTTTCTTAACCCCATCTGCTTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: TNAIRALCKEPSISL*SLKINFLNPICFSA
Trigger: AGCACTGAAGCAGATGGGGTTAAGAAAGTTAATTTTAAGACTTCACAAGCTAATGGATGGTTCCTTGCAAAGGGCACGTATAGCATTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS TCA 90 bp CCTGTCTTTCTGGATGGAACCAATGTACATCTTACATATATTGATTaGTGTCTCATGTCTCCCTCCACTGGACGATCGTTCTTTACCAAT +
Preference number: 5 (lower is better)
Translates to: PVFLDGTNVHLTYID*CLMSPSTGRSFFTN
Trigger: ATTGGTAAAGAACGATCGTCCAGTGGAGGGAGACATGAGACATCAATCAATATATGTAAGATGTACATTGGTTCCATCCAGAAAGACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS TCA 90 bp TTGTCCTGTCTTTCTGGATGGAACCAATGTACATCTTACATATATTaGTTGATGTCTCATGTCTCCCTCCACTGGACGATCGTTCTTTAC +
Preference number: 5 (lower is better)
Translates to: LSCLSGWNQCTSYIY*LMSHVSLHWTIVLY
Trigger: GTAAAGAACGATCGTCCAGTGGAGGGAGACATGAGACATCAATCAATATATGTAAGATGTACATTGGTTCCATCCAGAAAGACAGGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS-3UTR CAA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATTCAGATTCAGGACTCTaGCAAGCTGAATCTCCCAAT +
Preference number: 5 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYSDSGL*QAESPN
Trigger: ATTGGGAGATTCAGCTTGCAAGAGTCCTGAATCTGA...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp GATTGGTGGCTTATGTCCCATCCCCACTTTATACATAATTTGAAAGTTGTGCTCATGTCTGATAAATTCTaGATGCCCAAAACAGTGCCC +
Preference number: 5 (lower is better)
Translates to: DWWLMSHPHFIHNLKVVLMSDKF*MPKTVP
Trigger: GGGCACTGTTTTGGGCATCAAGAATTTATCAGACAT...GAGCACAACTTTCAAATTATGTATAAAGTGGGGATGGGACATAAGCCACCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTCAAAAGCGTCAATGTaGCAGTCGGGCTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSSKASM*QSGFSK
Trigger: CTTGGAGAAGCCCGACTGCAACATTGACGCTTTTGA...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CAA 90 bp TTTATACATAATTTGAAAGTTGTGCTCATACTCATGCCAAGGCCTCTTGCCAGTCGTCATCTGAATCTTTaGAACAGTCCTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: FIHNLKVVLILMPRPLASRHLNL*NSPFLQ
Trigger: CTGCAGGAAAGGACTGTTCAAAAGATTCAGATGACG...ACTGGCAAGAGGCCTTGGCATGAGTATGAGCACAACTTTCAAATTATGTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTATTTCTCGGTAGTACTGTaGCAAGGTGACAGATTCAGA +
Preference number: 5 (lower is better)
Translates to: LQSWKVKKAYTASQHSLYFSVVL*QGDRFR
Trigger: TCTGAATCTGTCACCTTGCAACAGTACTACCGAGAA...ATAAAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp CTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTACCAGATTGGGGTGTTaGATGCCTTCGAATATTTTC +
Preference number: 5 (lower is better)
Translates to: LQLLLNLERSKHYADVTVTRLGC*MPSNIF
Trigger: GAAAATATTCGAAGGCATCAAACACCCCAATCTGGT...AACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACAAAATACCGAACCAGATaGGGGTGTTTGATGCCTTCG +
Preference number: 5 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTKYRTR*GCLMPS
Trigger: CGAAGGCATCAAACACCCCAATCTGGTTCGGTATTT...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CAA 90 bp CTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCACGGTTCTCAGTTGTCCTGGAAGTCTTTaGCAGCATATTTTTCATAGT +
Preference number: 5 (lower is better)
Translates to: LLLNLERSKHYADVTVLSCPGSL*QHIFHS
Trigger: ACTATGAAAAATATGCTGCAAAAGACTTCCAGGACA...ACTGAGAACCGTGACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACAATGAAGGTGGTGTCCTaGACAACTGCACATAATCTG +
Preference number: 5 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTMKVVS*TTAHNL
Trigger: CAGATTATGTGCAGTTGTCAAGGACACCACCTTCAT...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CAA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTCCAGGAATTTGCACCTaGACATACTGTTTTGATTTC +
Preference number: 5 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLPGICT*TYCFDF
Trigger: GAAATCAAAACAGTATGTCAAGGTGCAAATTCCTGG...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCGGCATGGTCTGGGCATaGTTTTTGAGCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: ITLQLLLNLERSKHYADVGMVWA*FLSFTE
Trigger: TTCAGTAAAGCTCAAAAACAATGCCCAGACCATGCC...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGTCTTCAGTCTTGGAAGGTTAAAAAGGCTTATACTGCTTCTCAGCACAGTCTTTGTCCTGGAAGTCTTTaGCAGCATATTTTTCATAGT +
Preference number: 5 (lower is better)
Translates to: SLQSWKVKKAYTASQHSLCPGSL*QHIFHS
Trigger: ACTATGAAAAATATGCTGCAAAAGACTTCCAGGACA...AAGACTGTGCTGAGAAGCAGTATAAGCCTTTTTAACCTTCCAAGACTGAAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCCCAGGAATTTGCACCTaGACATACTGTTTTGATTTC +
Preference number: 5 (lower is better)
Translates to: ITLQLLLNLERSKHYADVPGICT*TYCFDF
Trigger: GAAATCAAAACAGTATGTCAAGGTGCAAATTCCTGG...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp TTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTTGCCAACACCAGGAATTTGCACCTaGACATACTGTTTTGATTTC +
Preference number: 5 (lower is better)
Translates to: FLNFSNQPFALQTCSLPTPGICT*TYCFDF
Trigger: GAAATCAAAACAGTATGTCAAGGTGCAAATTCCTGG...TGTTGGCAAGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CAA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCACCAGATTGGGGTGTTaGATGCCTTCGAATATTTTC +
Preference number: 5 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSTRLGC*MPSNIF
Trigger: GAAAATATTCGAAGGCATCAAACACCCCAATCTGGT...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS-3UTR CAA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCCCAAAATCTCCCAGTTaGATTAATCCAGATGAGGTA +
Preference number: 5 (lower is better)
Translates to: ITLQLLLNLERSKHYADVPKSPS*INPDEV
Trigger: TACCTCATCTGGATTAATCAAACTGGGAGATTTTGG...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp AGAACCTTTTTCTTAAATTTCAGTAATCAGCCTTTTGCATTACAAACCTGCAGCTCAGTAATCAGCCTTTaGCATTACAAACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: RTFFLNFSNQPFALQTCSSVISL*HYKPAA
Trigger: AGCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGA...GCTGCAGGTTTGTAATGCAAAAGGCTGATTACTGAAATTTAAGAAAAAGGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
CDS TCA 90 bp GATAAATTCTTGATGCCCAAAACAGTGCCCATAATCCTTAATTTCTaGTTTAAGTCTTTTGTGATGTTTAACCACAAACAGAGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: DKFLMPKTVPIILNF*FKSFVMFNHKQSAC
Trigger: GCAGGCACTCTGTTTGTGGTTAAACATCACAAAAGACTTAAATCAGAAATTAAGGATTATGGGCACTGTTTTGGGCATCAAGAATTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS-3UTR CAA 90 bp ATAACACTACAACTTCTTTTGAACCTAGAAAGGTCAAAACACTACGCTGATGTCTGTCCTGGAAGTCTTTaGCAGCATATTTTTCATAGT +
Preference number: 5 (lower is better)
Translates to: ITLQLLLNLERSKHYADVCPGSL*QHIFHS
Trigger: ACTATGAAAAATATGCTGCAAAAGACTTCCAGGACA...GACATCAGCGTAGTGTTTTGACCTTTCTAGGTTCAAAAGAAGTTGTAGTGTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CAA 90 bp CTCCGCCTCTACCCCGCCGCAGGAGCCGTGCGCGCCGCGGCCATCTaGGAAACGGCGACCGGCCGAGCGCCGGGGCTACGGTGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: LRLYPAAGAVRAAAI*ETATGRAPGLRWAA
Trigger: CGCCGCCCACCGTAGCCCCGGCGCTCGGCCGGTCGCCGTTTCCAAGATGGCCGCGGCGCGCACGGCTCCTGCGGCGGGGTAGAGGCGGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366919.6
CDS CCA 72 bp ACCCCGCCGCAGGAGCCGTGCGCGCCGCGGCCATCTTaGAAACGGCGACCGGCCGAGCGCCGGGGCTACGGT +
Preference number: 6 (lower is better)
Translates to: TPPQEPCAPRPS*KRRPAERRGYG
Trigger: ACCGTAGCCCCGGCGCTCGGCCGGTCGCCGTTTCCAAGATGGCCGCGGCGCGCACGGCTCCTGCGGCGGGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366919.6
CDS CAA 72 bp TACCCCGCCGCAGGAGCCGTGCGCGCCGCGGCCATCTaGGAAACGGCGACCGGCCGAGCGCCGGGGCTACGG +
Preference number: 6 (lower is better)
Translates to: YPAAGAVRAAAI*ETATGRAPGLR
Trigger: CCGTAGCCCCGGCGCTCGGCCGGTCGCCGTTTCCAAGATGGCCGCGGCGCGCACGGCTCCTGCGGCGGGGTA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366919.6
CDS TCA 72 bp GCCCTCTTGCCTCGCCGCCAAGCAGCACTCGGGTTCTaGCTCGGTCTCGGGTTCCGGTGGCGGTGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: ALLPRRQAALGF*LGLGFRWRWWR
Trigger: CCGCCACCACCGCCACCGGAACCCGAGACCGAGTCAGAACCCGAGTGCTGCTTGGCGGCGAGGCAAGAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS TCA 72 bp ATTCAGAAAACTCGCCGCCAAGCAGCACTCGGGTTCTaGCTCGGTCTCGGGTTCCGGTGGCGGTGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: IQKTRRQAALGF*LGLGFRWRWWR
Trigger: CCGCCACCACCGCCACCGGAACCCGAGACCGAGTCAGAACCCGAGTGCTGCTTGGCGGCGAGTTTTCTGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542952.5
CDS TCA 72 bp CGCACAGGACAGACCCACCAGAATCAGCCCCCTAAGTaGACAGCGCTGCTGTGGAGACCGTCCTCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: RTGQTHQNQPPK*TALLWRPSSGV
Trigger: GACTCCAGAGGACGGTCTCCACAGCAGCGCTGTTCACTTAGGGGGCTGATTCTGGTGGGTCTGTCCTGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536852.1
CDS GCA 72 bp AGACCCACCAGAATCAGCCCCCTAAGTGAACAGCGCTaGTGTGGAGACCGTCCTCTGGAGTCTGTTAGAGCT +
Preference number: 6 (lower is better)
Translates to: RPTRISPLSEQR*CGDRPLESVRA
Trigger: AGCTCTAACAGACTCCAGAGGACGGTCTCCACAGCAGCGCTGTTCACTTAGGGGGCTGATTCTGGTGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536852.1
CDS CCA 72 bp GTCATCACCCTCATACTCCGGCTCATTACCTTTGGATaGTCGAGGGGAAGGGATTTCAAACACTGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: VITLILRLITFG*SRGRDFKHWPA
Trigger: GGCTGGCCAGTGTTTGAAATCCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGGAGTATGAGGGTGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 72 bp ACCCCTGAATCCCTCTGGAGTGGGGATAATGAGGTGTaGGTTAGGAGGGTCACTATGGCATCGAGGTACCTT +
Preference number: 6 (lower is better)
Translates to: TPESLWSGDNEV*VRRVTMASRYL
Trigger: AAGGTACCTCGATGCCATAGTGACCCTCCTAACCCACACCTCATTATCCCCACTCCAGAGGGATTCAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000543421.5
CDS GCA 72 bp TCAACTGGGGGCAACTCTGCCTGCCAGGAACAACTCTaGCTCCAGCAATGTATTAGACACTTTTGGGAGGGT +
Preference number: 6 (lower is better)
Translates to: STGGNSACQEQL*LQQCIRHFWEG
Trigger: ACCCTCCCAAAAGTGTCTAATACATTGCTGGAGGCAGAGTTGTTCCTGGCAGGCAGAGTTGCCCCCAGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536852.1
CDS CCA 72 bp CTGTGTCATCACCCTCATACTCCGGCTCATTACCTTTaGATGGTCGAGGGGAAGGGATTTCAAACACTGGCC +
Preference number: 6 (lower is better)
Translates to: LCHHPHTPAHYL*MVEGKGFQTLA
Trigger: GGCCAGTGTTTGAAATCCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGGAGTATGAGGGTGATGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CAA 90 bp CCCCAGCCAAGAGAATCATCCTCAGATTCGAGCCTCTCAAGCTTCTaGGATATGCAGTCCCGCGACTGGATGTCGAAGCTGTTATCTATG +
Preference number: 6 (lower is better)
Translates to: PQPRESSSDSSLSSF*DMQSRDWMSKLLSM
Trigger: CATAGATAACAGCTTCGACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCTCGAATCTGAGGATGATTCTCTTGGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS TCA 72 bp TTTGAAAGTAGAACTTGGCAACTCAGCGCTCTCACCTaGAAGCTACACATCAGCAGGGTAAAGTGGGGGCGG +
Preference number: 6 (lower is better)
Translates to: FESRTWQLSALT*KLHISRVKWGR
Trigger: CCGCCCCCACTTTACCCTGCTGATGTGTAGCTTTCAGGTGAGAGCGCTGAGTTGCCAAGTTCTACTTTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540205.1
CDS TCA 72 bp CATCGAGGTACCTTCATAGGACGGGGGCTGTTCCGATaGATGGCTGCCAGCAAAAATGGCAACAAATGCAAC +
Preference number: 6 (lower is better)
Translates to: HRGTFIGRGLFR*MAASKNGNKCN
Trigger: GTTGCATTTGTTGCCATTTTTGCTGGCAGCCATTCATCGGAACAGCCCCCGTCCTATGAAGGTACCTCGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543421.5
CDS GCA 72 bp ATGTCTACTAAAGCCTGCTTCTGTGCTCCAGTCTGGTaGTCCCCAGCCAAGAGAATCATCCTCAGATTCGAG +
Preference number: 6 (lower is better)
Translates to: MSTKACFCAPVW*SPAKRIILRFE
Trigger: CTCGAATCTGAGGATGATTCTCTTGGCTGGGGAGCACCAGACTGGAGCACAGAAGCAGGCTTTAGTAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 72 bp TTTAAACGATCTGCTGGACAGTCAGTCCTAGAAGTCTaGCGTGCAGGTCTGGCTATAGGCATGGGCACAGAT +
Preference number: 6 (lower is better)
Translates to: FKRSAGQSVLEV*RAGLAIGMGTD
Trigger: ATCTGTGCCCATGCCTATAGCCAGACCTGCACGCCAGACTTCTAGGACTGACTGTCCAGCAGATCGTTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 72 bp GAGAATCATCCTCAGATTCGAGCCTCTCAAGCTTCTTaGATATGCAGTCCCGCGACTGGATGTCGAAGCTGT +
Preference number: 6 (lower is better)
Translates to: ENHPQIRASQAS*ICSPATGCRSC
Trigger: ACAGCTTCGACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCTCGAATCTGAGGATGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CAA 72 bp TCTGTGTCATCACCCTCATACTCCGGCTCATTACCTTaGGATGGTCGAGGGGAAGGGATTTCAAACACTGGC +
Preference number: 6 (lower is better)
Translates to: SVSSPSYSGSLP*DGRGEGISNTG
Trigger: GCCAGTGTTTGAAATCCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGGAGTATGAGGGTGATGACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CAA 72 bp AGAGAATCATCCTCAGATTCGAGCCTCTCAAGCTTCTaGGATATGCAGTCCCGCGACTGGATGTCGAAGCTG +
Preference number: 6 (lower is better)
Translates to: RESSSDSSLSSF*DMQSRDWMSKL
Trigger: CAGCTTCGACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCTCGAATCTGAGGATGATTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CAA 90 bp AATTCTCCTTCTGTGTCATCACCCTCATACTCCGGCTCATTACCTTaGGATGGTCGAGGGGAAGGGATTTCAAACACTGGCCAGCCAATG +
Preference number: 6 (lower is better)
Translates to: NSPSVSSPSYSGSLP*DGRGEGISNTGQPM
Trigger: CATTGGCTGGCCAGTGTTTGAAATCCCTTCCCCTCGACCATCCAAAGGTAATGAGCCGGAGTATGAGGGTGATGACACAGAAGGAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS GCA 72 bp CATCCTCAGATTCGAGCCTCTCAAGCTTCTTGGATATaGAGTCCCGCGACTGGATGTCGAAGCTGTTATCTA +
Preference number: 6 (lower is better)
Translates to: HPQIRASQASWI*SPATGCRSCYL
Trigger: TAGATAACAGCTTCGACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCTCGAATCTGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 72 bp AGCCTCTCAAGCTTCTTGGATATGCAGTCCCGCGACTaGATGTCGAAGCTGTTATCTATGGGCTGTCTGATT +
Preference number: 6 (lower is better)
Translates to: SLSSFLDMQSRD*MSKLLSMGCLI
Trigger: AATCAGACAGCCCATAGATAACAGCTTCGACATCCAGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 72 bp ACAATGTCTACTAAAGCCTGCTTCTGTGCTCCAGTCTaGTGCTCCCCAGCCAAGAGAATCATCCTCAGATTC +
Preference number: 6 (lower is better)
Translates to: TMSTKACFCAPV*CSPAKRIILRF
Trigger: GAATCTGAGGATGATTCTCTTGGCTGGGGAGCACCAGACTGGAGCACAGAAGCAGGCTTTAGTAGACATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CAA 90 bp CCCACGACACAGCACTGCATTTCTCCTCAGATGAAGGTGGTGTCCTaGACAACTGCACATAATCTGAACCCCACATGGGATCTGGAAATT +
Preference number: 6 (lower is better)
Translates to: PTTQHCISPQMKVVS*TTAHNLNPTWDLEI
Trigger: AATTTCCAGATCCCATGTGGGGTTCAGATTATGTGCAGTTGTCAAGGACACCACCTTCATCTGAGGAGAAATGCAGTGCTGTGTCGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000542952.5
ENST00000544041.5
CDS GCA 72 bp GAAATTCAGAAAACTGTGACCTGCAAGCCCCATCCCTaGTTCGAGTTGTCCTGTCTTTCTGGATGGAACCAA +
Preference number: 6 (lower is better)
Translates to: EIQKTVTCKPHP*FELSCLSGWNQ
Trigger: TTGGTTCCATCCAGAAAGACAGGACAACTCGAAGCAGGGATGGGGCTTGCAGGTCACAGTTTTCTGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS CCA 72 bp GATCTGCGAGATTTTTCTAGAGCAATAATTCTCAACTaGGGGCAACTCTGCCTGCCAGGAACAACTCTGCCT +
Preference number: 6 (lower is better)
Translates to: DLRDFSRAIILN*GQLCLPGTTLP
Trigger: AGGCAGAGTTGTTCCTGGCAGGCAGAGTTGCCCCCAGTTGAGAATTATTGCTCTAGAAAAATCTCGCAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536852.1
CDS CCA 72 bp GTGTCCTTGACAACTGCACATAATCTGAACCCCACATaGGATCTGGAAATTCAGAAAACTCGCCGCCAAGCA +
Preference number: 6 (lower is better)
Translates to: VSLTTAHNLNPT*DLEIQKTRRQA
Trigger: TGCTTGGCGGCGAGTTTTCTGAATTTCCAGATCCCATGTGGGGTTCAGATTATGTGCAGTTGTCAAGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542952.5
CDS CAA 72 bp CAGCACTGCATTTCTCCTCAGATGAAGGTGGTGTCCTaGACAACTGCACATAATCTGAACCCCACATGGGAT +
Preference number: 6 (lower is better)
Translates to: QHCISPQMKVVS*TTAHNLNPTWD
Trigger: ATCCCATGTGGGGTTCAGATTATGTGCAGTTGTCAAGGACACCACCTTCATCTGAGGAGAAATGCAGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000542952.5
ENST00000544041.5
CDS CAA 90 bp TCTGGCGTTGGAGATGCTCATGATGTGTTGAGTAACCTACAATCTTaGTTCCAGGAGTGGCTTTGCACTGCCCTTCTACTGAAGTACCAT +
Preference number: 6 (lower is better)
Translates to: SGVGDAHDVLSNLQS*FQEWLCTALLLKYH
Trigger: ATGGTACTTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAACAAAGATTGTAGGTTACTCAACACATCATGAGCATCTCCAACGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS TCA 72 bp CTTCAATTTAAGGAGGAAGAAACAGCATGGGAGATCTaGCGGACACCTTTCAAATTAGACCGACTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: LQFKEEETAWEI*RTPFKLDRLAG
Trigger: GCCAGCCAGTCGGTCTAATTTGAAAGGTGTCCGTCAGATCTCCCATGCTGTTTCTTCCTCCTTAAATTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446500.1
CDS GCA 72 bp TCTATGTACTCTAGCAGCTCCATTATCCGTTTTACCTaGTCAAATGAGACCCTCTGGCGTTGGAGATGCTCA +
Preference number: 6 (lower is better)
Translates to: SMYSSSSIIRFT*SNETLWRWRCS
Trigger: TGAGCATCTCCAACGCCAGAGGGTCTCATTTGAGCAGGTAAAACGGATAATGGAGCTGCTAGAGTACATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS GCA 72 bp TTTTCTAGAGCAATAATTCTCAACTGGGGGCAACTCTaGCTGCCAGGAACAACTCTGCCTCCAGCAATGTAT +
Preference number: 6 (lower is better)
Translates to: FSRAIILNWGQL*LPGTTLPPAMY
Trigger: ATACATTGCTGGAGGCAGAGTTGTTCCTGGCAGGCAGAGTTGCCCCCAGTTGAGAATTATTGCTCTAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536852.1
CDS CCA 72 bp GTTTGGTTGACATGCGTTTCATCTGTCGAGGTGTGCTaGGGGGAGAGGTACCATAAAGATTCTCTGTATTTG +
Preference number: 6 (lower is better)
Translates to: VWLTCVSSVEVC*GERYHKDSLYL
Trigger: CAAATACAGAGAATCTTTATGGTACCTCTCCCCCCAGCACACCTCGACAGATGAAACGCATGTCAACCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000448119.2
ENST00000490904.6
ENST00000544041.5
CDS CCA 72 bp GGGGCTGTTCCGATGAATGGCTGTAACAGGACTGTGTaGTTTTCCTATGACATGGCCAATGCATTCATTCAT +
Preference number: 6 (lower is better)
Translates to: GAVPMNGCNRTV*FSYDMANAFIH
Trigger: ATGAATGAATGCATTGGCCATGTCATAGGAAAACCACACAGTCCTGTTACAGCCATTCATCGGAACAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348824.11
ENST00000366920.6
CDS CAA 72 bp GGAGATGCTCATGATGTGTTGAGTAACCTACAATCTTaGTTCCAGGAGTGGCTTTGCACTGCCCTTCTACTG +
Preference number: 6 (lower is better)
Translates to: GDAHDVLSNLQS*FQEWLCTALLL
Trigger: CAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAACAAAGATTGTAGGTTACTCAACACATCATGAGCATCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CAA 72 bp TCATCGGAGAAGTCTTCTAGATCAGATTCAGGACTCTaGCAAGCTGAATCTCCCAATGTGCCCTCTTGCCAA +
Preference number: 6 (lower is better)
Translates to: SSEKSSRSDSGL*QAESPNVPSCQ
Trigger: TTGGCAAGAGGGCACATTGGGAGATTCAGCTTGCAAGAGTCCTGAATCTGATCTAGAAGACTTCTCCGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448119.2
CDS CAA 90 bp GTATTTGTTTCATCGGAGAAGTCTTCTAGATCAGATTCAGGACTCTaGCAAGCTGAATCTCCCAATGTGCCCTCTTGCCAAATGCAGGGA +
Preference number: 6 (lower is better)
Translates to: VFVSSEKSSRSDSGL*QAESPNVPSCQMQG
Trigger: TCCCTGCATTTGGCAAGAGGGCACATTGGGAGATTCAGCTTGCAAGAGTCCTGAATCTGATCTAGAAGACTTCTCCGATGAAACAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448119.2
CDS GCA 72 bp AAAAAGAAGTCCTGGTCGTTAATTGTCCGTCCTGCATaGCAGGCTTGTAGCTCTAACCAGATCAGTTCGTTA +
Preference number: 6 (lower is better)
Translates to: KKKSWSLIVRPA*QACSSNQISSL
Trigger: TAACGAACTGATCTGGTTAGAGCTACAAGCCTGGCATGCAGGACGGACAATTAACGACCAGGACTTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CCA 72 bp GTGTCCTTGACAACTGCACATAATCTGAACCCCACATaGGATCTGGAAATTCAGAAAACTCCACTGGACGAT +
Preference number: 6 (lower is better)
Translates to: VSLTTAHNLNPT*DLEIQKTPLDD
Trigger: ATCGTCCAGTGGAGTTTTCTGAATTTCCAGATCCCATGTGGGGTTCAGATTATGTGCAGTTGTCAAGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000544041.5
CDS CCA 72 bp GTGTCCTTGACAACTGCACATAATCTGAACCCCACATaGGATCTGGAAATTCAGAAAACTGTGACCTGCAAG +
Preference number: 6 (lower is better)
Translates to: VSLTTAHNLNPT*DLEIQKTVTCK
Trigger: CTTGCAGGTCACAGTTTTCTGAATTTCCAGATCCCATGTGGGGTTCAGATTATGTGCAGTTGTCAAGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS TCA 72 bp CTTTGTTCCAGGAGTGGCTTTGCACTGCCCTTCTACTaGAGTACCATTAAAACCAGCTCTATCTCTAACAAA +
Preference number: 6 (lower is better)
Translates to: LCSRSGFALPFY*STIKTSSISNK
Trigger: TTTGTTAGAGATAGAGCTGGTTTTAATGGTACTTCAGTAGAAGGGCAGTGCAAAGCCACTCCTGGAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS TCA 72 bp ACACCTCTTCTAAAGTCCCCTCATCGCAGTACTCCATaGAGATGTACATTTCTTCATTTTAGGAGGAACTCC +
Preference number: 6 (lower is better)
Translates to: TPLLKSPHRSTP*RCTFLHFRRNS
Trigger: GGAGTTCCTCCTAAAATGAAGAAATGTACATCTTCATGGAGTACTGCGATGAGGGGACTTTAGAAGAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539610.1
ENST00000544041.5
CDS CCA 72 bp ATGGCTGTAACAGGACTGTGTGGTTTTCCTATGACATaGCCAATGCATTCATTCATCAAGGCTTGTAAACTC +
Preference number: 6 (lower is better)
Translates to: MAVTGLCGFPMT*PMHSFIKACKL
Trigger: GAGTTTACAAGCCTTGATGAATGAATGCATTGGCCATGTCATAGGAAAACCACACAGTCCTGTTACAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348824.11
ENST00000366920.6
CDS CCA 72 bp CAAGCCCCATCCCTGCTTCGAGTTGTCCTGTCTTTCTaGATGGAACCAATGTACATCTTACATATATTGATT +
Preference number: 6 (lower is better)
Translates to: QAPSLLRVVLSF*MEPMYILHILI
Trigger: AATCAATATATGTAAGATGTACATTGGTTCCATCCAGAAAGACAGGACAACTCGAAGCAGGGATGGGGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS TCA 72 bp CTTTCTGGATGGAACCAATGTACATCTTACATATATTaGTTGATGTCTCATGTCTCCCTCCACTGGACGATC +
Preference number: 6 (lower is better)
Translates to: LSGWNQCTSYIY*LMSHVSLHWTI
Trigger: GATCGTCCAGTGGAGGGAGACATGAGACATCAATCAATATATGTAAGATGTACATTGGTTCCATCCAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490904.6
CDS TCA 72 bp ATACGTGCCCTTTGCAAGGAACCATCCATTAGCTTGTaGAGTCTTAAAATTAACTTTCTTAACCCCATCTGC +
Preference number: 6 (lower is better)
Translates to: IRALCKEPSISL*SLKINFLNPIC
Trigger: GCAGATGGGGTTAAGAAAGTTAATTTTAAGACTTCACAAGCTAATGGATGGTTCCTTGCAAAGGGCACGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5
CDS CAA 72 bp ATTTCAAACACTGGCCAGCCAATGTCTGATAAATTCTaGATGCCCAAAACAGTGCCCATAATCCTTAATTTC +
Preference number: 6 (lower is better)
Translates to: ISNTGQPMSDKF*MPKTVPIILNF
Trigger: GAAATTAAGGATTATGGGCACTGTTTTGGGCATCAAGAATTTATCAGACATTGGCTGGCCAGTGTTTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348824.11
ENST00000366919.6
ENST00000366920.6
ENST00000392142.9
ENST00000490904.6
ENST00000544041.5