RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP3K3 (Homo sapiens)

Ensembl gene IDs: ENSG00000198909

Ensembl transcript IDs: ENST00000361357.7, ENST00000361733.8, ENST00000577395.5, ENST00000577597.5, ENST00000577784.1, ENST00000577839.1, ENST00000578622.5, ENST00000579585.5, ENST00000581732.1, ENST00000584573.5, ENST00000585302.1

Found 877 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTaGCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGC +
Preference number: 1 (lower is better)
Translates to: CLGEAATSLSPAAAP*HAAKGDRQLCGRES
Trigger: GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
3UTR GCA 90 bp CACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTaGCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCC +
Preference number: 1 (lower is better)
Translates to: HRPTLAGLPLHGPQP*LGEAATSLSPAAAP
Trigger: GGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
3UTR GCA 90 bp TCTAGGGGACGGCAGCCTGGGCCTCTGCCTGCCACTGCTAGCGAGTaGTGGCCTTTCCCTCAGGCTTGTGGGAGCTCATCCAGCCCAGAG +
Preference number: 1 (lower is better)
Translates to: SRGRQPGPLPATASE*WPFPQACGSSSSPE
Trigger: CTCTGGGCTGGATGAGCTCCCACAAGCCTGAGGGAAAGGCCAGCACTCGCTAGCAGTGGCAGGCAGAGGCCCAGGCTGCCGTCCCCTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR CCA 90 bp AGGGGACGGCAGCCTGGGCCTCTGCCTGCCACTGCTAGCGAGTGCTaGCCTTTCCCTCAGGCTTGTGGGAGCTCATCCAGCCCAGAGATG +
Preference number: 1 (lower is better)
Translates to: RGRQPGPLPATASEC*PFPQACGSSSSPEM
Trigger: CATCTCTGGGCTGGATGAGCTCCCACAAGCCTGAGGGAAAGGCCAGCACTCGCTAGCAGTGGCAGGCAGAGGCCCAGGCTGCCGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR TCA 90 bp CACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTaGGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGC +
Preference number: 1 (lower is better)
Translates to: HSMVHSLAWEKQQLH*AQQQPPAMQQRATG
Trigger: GCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
3UTR CCA 90 bp GGCCAGATGCCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTaGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTCA +
Preference number: 1 (lower is better)
Translates to: GQMPRPCRPSPLLLQ*GTKAGPGAQRPQPS
Trigger: TGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGGCATCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR GCA 90 bp CAGTTGATGGGGGCACTGGGAGACTTGGTTGGCACATTCCTCTCCTaGACAGAGAGGGCATTCTCGCTGTCCGCACTCCGCAGGCGCCCA +
Preference number: 1 (lower is better)
Translates to: QLMGALGDLVGTFLS*TERAFSLSALRRRP
Trigger: TGGGCGCCTGCGGAGTGCGGACAGCGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCCCCATCAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR TCA 90 bp CCGGGCAATGTGCTGCTGCCGCTCAGGAACATAGCCAGGGGGAGGTaGGCTTCGGCCAGGGTTCTGGGAGCCTTGACTTCTGTCTCTGTT +
Preference number: 1 (lower is better)
Translates to: PGNVLLPLRNIARGR*ASARVLGALTSVSV
Trigger: AACAGAGACAGAAGTCAAGGCTCCCAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTATGTTCCTGAGCGGCAGCAGCACATTGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585302.1
3UTR GCA 90 bp GGCTGGGCCAGGAGCGCAAAGGCCACAACCTTCAGCTCTTTTCAATaGAGCCTAGGCCCAAGCCCAAAGCAGGGGTACTCAGAGCCCAGA +
Preference number: 1 (lower is better)
Translates to: GWARSAKATTFSSFQ*SLGPSPKQGYSEPR
Trigger: TCTGGGCTCTGAGTACCCCTGCTTTGGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR CCA 90 bp GGTGGTAGCATATGGGCTTTCCCTTCTACCAGATGGAGTGGGCTCTaGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCCTCGG +
Preference number: 1 (lower is better)
Translates to: GGSIWAFPSTRWSGL*PSRSRLRQPETPPR
Trigger: CCGAGGAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATCTGGTAGAAGGGAAAGCCCATATGCTACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR CCA 90 bp AACACTCTTCATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTaGGCTTCGGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGT +
Preference number: 1 (lower is better)
Translates to: NTLHTLASVLCPQTL*ASVPIAVSGHIPEG
Trigger: ACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACCGAAGCCCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR GCA 90 bp GGGCTGGGTGGCAATCTTGAAGATGGCGGCCATAGCTTCATACTCTaGCCACGGTGGTTTCTCTGTCAGCATCTCCACCACAGTGCAGCC +
Preference number: 1 (lower is better)
Translates to: GLGGNLEDGGHSFIL*PRWFLCQHLHHSAA
Trigger: GGCTGCACTGTGGTGGAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATGGCCGCCATCTTCAAGATTGCCACCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR CCA 90 bp TTGGACACAGCTGGTGGTAGCATATGGGCTTTCCCTTCTACCAGATaGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAG +
Preference number: 1 (lower is better)
Translates to: LDTAGGSIWAFPSTR*SGLWPSRSRLRQPE
Trigger: CTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATCTGGTAGAAGGGAAAGCCCATATGCTACCACCAGCTGTGTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR GCA 90 bp GGGTCTTCTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATaGGCTCATGCTGCAAGTTCTTTAGCAACTGGATCTCGCACTCCA +
Preference number: 1 (lower is better)
Translates to: GSSQRGPADSHSTAR*AHAASSLATGSRTP
Trigger: TGGAGTGCGAGATCCAGTTGCTAAAGAACTTGCAGCATGAGCGCATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAGAAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
3UTR GCA 90 bp GGATGGGCTGTCCAAGGATTGGCAGCTTCCAGACAAGGAATTTTCTaGACTGCTCAGGGGATCCAGCATGCACTGCTCGCTGGTCTCTGG +
Preference number: 1 (lower is better)
Translates to: GWAVQGLAASRQGIF*TAQGIQHALLAGLW
Trigger: CCAGAGACCAGCGAGCAGTGCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585302.1
3UTR CCA 90 bp GGCAGCATGACATTTGCTTCATTCATCTTTGGTAAAGGACAGGACTaGCAGAGCCAACCTGGGACTCTAGGGGACGGCAGCCTGGGCCTC +
Preference number: 1 (lower is better)
Translates to: GSMTFASFIFGKGQD*QSQPGTLGDGSLGL
Trigger: GAGGCCCAGGCTGCCGTCCCCTAGAGTCCCAGGTTGGCTCTGCCAGTCCTGTCCTTTACCAAAGATGAATGAAGCAAATGTCATGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR TCA 90 bp TGTTCTCGCCATTTGTGCTCAGGGAGCGGCTGGAGGGCACCAGGGTaGACAAGTTGCCTTGATGACGCCGTATTCGGGGAAATGTTCTTC +
Preference number: 1 (lower is better)
Translates to: CSRHLCSGSGWRAPG*TSCLDDAVFGEMFF
Trigger: GAAGAACATTTCCCCGAATACGGCGTCATCAAGGCAACTTGTTCACCCTGGTGCCCTCCAGCCGCTCCCTGAGCACAAATGGCGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR TCA 90 bp TCAGTACATGAGCTGTGCAAAGTGGTGTGTGAGCAGCTCCTCAGCTaGAGGTCTCTGGCGAGCCTCCACAAAAATGCGCCTCAGGAAGTC +
Preference number: 1 (lower is better)
Translates to: SVHELCKVVCEQLLS*RSLASLHKNAPQEV
Trigger: GACTTCCTGAGGCGCATTTTTGTGGAGGCTCGCCAGAGACCTTCAGCTGAGGAGCTGCTCACACACCACTTTGCACAGCTCATGTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR CCA 90 bp CGTGATTTCCGGAAGGATGGGCTGTCTGCTGACCTGTCCAAGGATTaGCAGCTTCCAGACAAGGAATTTTCTGCACTGCTCAGGGGATCC +
Preference number: 1 (lower is better)
Translates to: RDFRKDGLSADLSKD*QLPDKEFSALLRGS
Trigger: GGATCCCCTGAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGGTCAGCAGACAGCCCATCCTTCCGGAAATCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR TCA 90 bp TGTGGTGCACAGACACGTGGTAGCGCCGGGGGTAGGTTCCACCTTTaGCCCCTTTGTCATAAAGCTGAGTTTCCCGATCTGAGTATTCCT +
Preference number: 1 (lower is better)
Translates to: CGAQTRGSAGGRFHL*PLCHKAEFPDLSIP
Trigger: AGGAATACTCAGATCGGGAAACTCAGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACCCCCGGCGCTACCACGTGTCTGTGCACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000585302.1
3UTR GCA 90 bp CCAGGCCCAACTGGCGCATGCGACACACACTTCTGCAAAACCAGCTaGTTTCATTTTCTCTTCTCTCTCTTGAGGCGTCCGTCACCTGTA +
Preference number: 1 (lower is better)
Translates to: PGPTGACDTHFCKTS*FHFLFSLLRRPSPV
Trigger: TACAGGTGACGGACGCCTCAAGAGAGAGAAGAGAAAATGAAAGCAGCTGGTTTTGCAGAAGTGTGTGTCGCATGCGCCAGTTGGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
3UTR-3UTR CCA 90 bp GGACACATCCCCGAGGGTGGGGCCCACGGCTGCCTTGCACACTGTTCCCAGCCCCAGACCGACGCTGGCTaGGCTGCCACTCCATGGTCC +
Preference number: 2 (lower is better)
Translates to: GHIPEGGAHGCLAHCSQPQTDAG*AATPWS
Trigger: GGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTG...GGGCTGGGAACAGTGTGCAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR GCA 90 bp GTGGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAAGCAGCCCCCTGCCATaGAGCAAAGGGCGACCGGCA +
Preference number: 2 (lower is better)
Translates to: VAEGAQTDAGWAATPWSTSSPLP*SKGRPA
Trigger: TGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCT...TGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
3UTR-3UTR GCA 90 bp AAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCAGCAGCCCCCTGCCATaGAGCAAAGGGCGACCGGCA +
Preference number: 2 (lower is better)
Translates to: KGHRPTLAGLPLHGPQPCSSPLP*SKGRPA
Trigger: TGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCT...GCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
3UTR-3UTR GCA 90 bp TGGCCAGGCCAGATGCCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGCAGCCTGGGCCTCTaGCTGCCACTGCTAGCGAGT +
Preference number: 2 (lower is better)
Translates to: WPGQMPRPCRPSPLLLQWGSLGL*LPLLAS
Trigger: ACTCGCTAGCAGTGGCAGGCAGAGGCCCAGGCTGCC...CCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGGCATCTGGCCTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp TGGCCAGGCCAGATGCCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGCACAGACCGACGCTaGCTGGGCTGCCACTCCATG +
Preference number: 2 (lower is better)
Translates to: WPGQMPRPCRPSPLLLQWGTDRR*LGCHSM
Trigger: CATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC...CCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGGCATCTGGCCTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR CAA 90 bp GCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTaGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: AQTDAGWAATPWSTA*PGRSSNFTEPSSSP
Trigger: GGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
3UTR-3UTR GCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACCAGCAGCAGCCCCCTaGCATGCAGCAAAGGGCGAC +
Preference number: 2 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQPAAAP*HAAKGD
Trigger: GTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
3UTR-3UTR CCA 90 bp CACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCTGGGGGCTCCCACAGACCGACGCTGGCTaGGCTGCCACTCCATGGTCC +
Preference number: 2 (lower is better)
Translates to: HAELRTLELLDLTGWGLPQTDAG*AATPWS
Trigger: GGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTG...TGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR TCA 90 bp AGGAGCTACAAGGGAAAGGGGCTGAGACCTCAAGGGGATGGGCGAGGCTGGCTGTGGAGCTCCTGGATCTaGCAGGCTGGGGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: RSYKGKGLRPQGDGRGWLWSSWI*QAGGSQ
Trigger: CTGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCA...CAGCCAGCCTCGCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGTAGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR TCA 90 bp GAGAGGGCATTCTCGCTGTCCGCACTCCGCAGGCGCCCACGGGGGTCCAGGTATACTCCCCCTCACTGTTaGTGCTGGTGTAGGACCCCT +
Preference number: 2 (lower is better)
Translates to: ERAFSLSALRRRPRGSRYTPPHC*CWCRTP
Trigger: AGGGGTCCTACACCAGCATCAACAGTGAGGGGGAGT...ATACCTGGACCCCCGTGGGCGCCTGCGGAGTGCGGACAGCGAGAATGCCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR GCA 90 bp TCAATGCAGCCTAGGCCCAAGCCCAAAGCAGGGGTACTCAGAGCCCAGAGGGCACACATCGCGGGCCCCTaGCTGGGAGAGGCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: SMQPRPKPKAGVLRAQRAHIAGP*LGEAGS
Trigger: TGACCCTGCCTCTCCCAGGCAGGGGCCCGCGATGTG...TGCCCTCTGGGCTCTGAGTACCCCTGCTTTGGGCTTGGGCCTAGGCTGCATTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp GGACACATCCCCGAGGGTGGGGCCCACGGCTGCCTTGCACACTGTTCCCAGCCCGTCCACAGCCTTGCCTaGGAGAAGCAGCAACTTCAC +
Preference number: 2 (lower is better)
Translates to: GHIPEGGAHGCLAHCSQPVHSLA*EKQQLH
Trigger: GTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGAC...GGGCTGGGAACAGTGTGCAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR GCA 90 bp TGGCCAGGCCAGATGCCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGCATCCAGCCCAGAGATaGCCTGGTGGTCTCCAGACA +
Preference number: 2 (lower is better)
Translates to: WPGQMPRPCRPSPLLLQWHPAQR*PGGLQT
Trigger: TGTCTGGAGACCACCAGGGCATCTCTGGGCTGGATG...CCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGGCATCTGGCCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCTGGATCTGACAGGCTaGGGGCTCCCAGTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQELDLTG*GLPVLR
Trigger: CCTCAGGACTGGGAGCCCCCAGCCTGTCAGATCCAG...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCGGAGAGGCAGGGTCATaGCCACAGGCAGGACAGGCT +
Preference number: 2 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLGEAGS*PQAGQA
Trigger: AGCCTGTCCTGCCTGTGGCCATGACCCTGCCTCTCC...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCGTGGGGAACAAAGGCTaGGCCAGGAGCGCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLVGNKG*ARSAKA
Trigger: GGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCAC...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR TCA 90 bp GCCAGTGACGGAGCGCATGCCCGTCCCCGACATACAGATCGTCTGCAGGCGTTTAAGCAGCAACTTCACTaGGCCCAGCAGCAGCCCCCT +
Preference number: 2 (lower is better)
Translates to: ASDGAHARPRHTDRLQAFKQQLH*AQQQPP
Trigger: AGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTT...AAACGCCTGCAGACGATCTGTATGTCGGGGACGGGCATGCGCTCCGTCACTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR TCA 90 bp GCTGCCGCTCAGGAACATAGCCAGGGGGAGGTGAGCTTCGGCCAGGGTTCTGGGGGGTTCTGGGAGCCTTaGCTTCTGTCTCTGTTTCCC +
Preference number: 2 (lower is better)
Translates to: AAAQEHSQGEVSFGQGSGGFWEP*LLSLFP
Trigger: GGGAAACAGAGACAGAAGTCAAGGCTCCCAGAACCC...CCCAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTATGTTCCTGAGCGGCAGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000585302.1
3UTR-3UTR GCA 90 bp CCACGGGGGTCCAGGTATTGCACAGCCAGACCCATGTTCTCGCCATTTGTGCTCAGCAGCCCCCTGCCATaGAGCAAAGGGCGACCGGCA +
Preference number: 2 (lower is better)
Translates to: PRGSRYCTARPMFSPFVLSSPLP*SKGRPA
Trigger: TGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCT...GAGCACAAATGGCGAGAACATGGGTCTGGCTGTGCAATACCTGGACCCCCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CCA 90 bp CGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCATGCCCCCAGACCCTCTaGGCTTCGGTGCCAATTGCA +
Preference number: 2 (lower is better)
Translates to: RPCRPSPLLLQWGTKAGPCPQTL*ASVPIA
Trigger: TGCAATTGGCACCGAAGCCCAGAGGGTCTGGGGGCA...TGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACGGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp TGGCCAGGCCAGATGCCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGACTGCTAGCGAGTGCTaGCCTTTCCCTCAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: WPGQMPRPCRPSPLLLQWTASEC*PFPQAC
Trigger: ACAAGCCTGAGGGAAAGGCCAGCACTCGCTAGCAGT...CCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGGCATCTGGCCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR TCA 90 bp CATACTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCCACCACAGTGCAGCCCATTCCCCGGCGCCAGTTaGTGGGGGCACTGGGAGACT +
Preference number: 2 (lower is better)
Translates to: HTLPTVVSLSASPPQCSPFPGAS*WGHWET
Trigger: AGTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAA...TGGGCTGCACTGTGGTGGAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR GCA 90 bp GAGCGCAAAGGCCACAACCTTCAGCTCTTTTCAATGCAGCCTAGGCCCAAGCCCCCAGCAGCAGCCCCCTaGCATGCAGCAAAGGGCGAC +
Preference number: 2 (lower is better)
Translates to: ERKGHNLQLFSMQPRPKPPAAAP*HAAKGD
Trigger: GTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG...GGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAAGGTTGTGGCCTTTGCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp GGAAGAACAGAGCTGGCGGTTTTGGACACAGCTGGTGGTAGCATATGGGCTTTCTCGCGGGCCCCTGCCTaGGAGAGGCAGGGTCATGGC +
Preference number: 2 (lower is better)
Translates to: GRTELAVLDTAGGSIWAFSRAPA*ERQGHG
Trigger: GCCATGACCCTGCCTCTCCCAGGCAGGGGCCCGCGA...GAAAGCCCATATGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTGTTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp GTGCCAGTGACGGAGCGCATGCCCGTCCCCGACATACAGATCGTCTGCAGGCGTCTGGACACCCCAGAGTaGGGAGAGGAACTGTTATGG +
Preference number: 2 (lower is better)
Translates to: VPVTERMPVPDIQIVCRRLDTPE*GEELLW
Trigger: CCATAACAGTTCCTCTCCCCACTCTGGGGTGTCCAG...ACGCCTGCAGACGATCTGTATGTCGGGGACGGGCATGCGCTCCGTCACTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR CAA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTaGGAGGGGAGGGGCCGGAAGAAAGGACCAGCGCCCAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: GNWVLRGRSSSNRHI*EGRGRKKGPAPRLR
Trigger: CCTCAGCCTGGGCGCTGGTCCTTTCTTCCGGCCCCTCCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR GCA 90 bp AGGAGCTACAAGGGAAAGGGGCTGAGACCTCAAGGGGATGGGCGAGGCTGGCTGGGCTTCGGTGCCAATTaGAGTGTCAGGACACATCCC +
Preference number: 2 (lower is better)
Translates to: RSYKGKGLRPQGDGRGWLGFGAN*SVRTHP
Trigger: GGGATGTGTCCTGACACTGCAATTGGCACCGAAGCC...CAGCCAGCCTCGCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGTAGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR GCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCGGCTTCGGTGCCAATTaGAGTGTCAGGACACATCCC +
Preference number: 2 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLGFGAN*SVRTHP
Trigger: GGGATGTGTCCTGACACTGCAATTGGCACCGAAGCC...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR GCA 90 bp CCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCGGCTTCGGTGCCAATTaGAGTGTCAGGACACATCCC +
Preference number: 2 (lower is better)
Translates to: PSAPVGNKGWARSAKATTGFGAN*SVRTHP
Trigger: GGGATGTGTCCTGACACTGCAATTGGCACCGAAGCC...GGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR GCA 90 bp CATACTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCCACCACAGTGCAGCCCACCCTGCCGGGCAATGTaGTGCTGCCGCTCAGGAACA +
Preference number: 2 (lower is better)
Translates to: HTLPTVVSLSASPPQCSPPCRAM*CCRSGT
Trigger: TGTTCCTGAGCGGCAGCAGCACATTGCCCGGCAGGG...TGGGCTGCACTGTGGTGGAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR GCA 90 bp CTTCTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATGCGCTCATGCTGGGATCCAGCATGCACTaGTCGCTGGTCTCTGGGATG +
Preference number: 2 (lower is better)
Translates to: LLSAVPQTAIVLHDALMLGSSMH*SLVSGM
Trigger: CATCCCAGAGACCAGCGAGCAGTGCATGCTGGATCC...CAGCATGAGCGCATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CCA 90 bp CAGGGATGGACACAGGAGGGTCCAGGCCCAACTGGCGCATGCGACACACACTTCCCAGAGATGCCCTGGTaGTCTCCAGACATTGGAAGG +
Preference number: 2 (lower is better)
Translates to: QGWTQEGPGPTGACDTHFPEMPW*SPDIGR
Trigger: CCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGG...GAAGTGTGTGTCGCATGCGCCAGTTGGGCCTGGACCCTCCTGTGTCCATCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
3UTR-3UTR CCA 90 bp TGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCCTAGCCCAGAGATGCCCTaGTGGTCTCCAGACATTGGA +
Preference number: 2 (lower is better)
Translates to: WSGLWPSRSRLRQPETPPSPEMP*WSPDIG
Trigger: TCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCT...AGGAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCTTTCCCTCAGGCTTGTaGGAGCTCATCCAGCCCAGA +
Preference number: 2 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLFPSGL*ELIQPR
Trigger: TCTGGGCTGGATGAGCTCCCACAAGCCTGAGGGAAA...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR TCA 90 bp AGCTCATCCAGCCCAGAGATGCCCTGGTGGTCTCCAGACATTGGAAGGAAAAACTGGAGCTCCTGGATCTaGCAGGCTGGGGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: SSSSPEMPWWSPDIGRKNWSSWI*QAGGSQ
Trigger: CTGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCA...GTTTTTCCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCTGGATGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR TCA 90 bp GAAAATAACACTCTTCATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGTGGAGCTCCTGGATCTaGCAGGCTGGGGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: ENNTLHTLASVLCPQTLWWSSWI*QAGGSQ
Trigger: CTGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCA...CCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGTTATTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp GAGCGCAAAGGCCACAACCTTCAGCTCTTTTCAATGCAGCCTAGGCCCAAGCCCTGCCCCCAGACCCTCTaGGCTTCGGTGCCAATTGCA +
Preference number: 2 (lower is better)
Translates to: ERKGHNLQLFSMQPRPKPCPQTL*ASVPIA
Trigger: TGCAATTGGCACCGAAGCCCAGAGGGTCTGGGGGCA...GGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAAGGTTGTGGCCTTTGCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGCCTCCTCGGGCTCTCTaGGATCAGGGCACTGGCCAG +
Preference number: 2 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGPPRAL*DQGTGQ
Trigger: CTGGCCAGTGCCCTGATCCCAGAGAGCCCGAGGAGG...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp CAGTTGATGGGGGCACTGGGAGACTTGGTTGGCACATTCCTCTCCTGCACAGAGCTTCGGCCAGGGTTCTaGGAGCTGACAGAGAGGTGC +
Preference number: 2 (lower is better)
Translates to: QLMGALGDLVGTFLSCTELRPGF*ELTERC
Trigger: GCACCTCTCTGTCAGCTCCCAGAACCCTGGCCGAAG...CTCTGTGCAGGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCCCCATCAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR TCA 90 bp GTAGCGCCGGGGGTAGGTTCCACCTTTGACCCCTTTGTCATAAAGCTGAGTTTCATAGCCAGGGGGAGGTaGGCTTCGGCCAGGGTTCTG +
Preference number: 2 (lower is better)
Translates to: VAPGVGSTFDPFVIKLSFIARGR*ASARVL
Trigger: CAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTAT...GAAACTCAGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACCCCCGGCGCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000585302.1
3UTR-3UTR TCA 90 bp CATACTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCCACCACAGTGCAGCCCAGGATGGGCTGTCTGCTaGCCTGTCCAAGGATTGGCA +
Preference number: 2 (lower is better)
Translates to: HTLPTVVSLSASPPQCSPGWAVC*PVQGLA
Trigger: TGCCAATCCTTGGACAGGTCAGCAGACAGCCCATCC...TGGGCTGCACTGTGGTGGAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR GCA 90 bp TCTGTCAGCATCTCCACCACAGTGCAGCCCAGGCTCCACACGTCTGCTTTCCTTCGGGGGTCCAGGTATTaGACAGCCAGACCCATGTTC +
Preference number: 2 (lower is better)
Translates to: SVSISTTVQPRLHTSAFLRGSRY*TARPMF
Trigger: GAACATGGGTCTGGCTGTGCAATACCTGGACCCCCG...AAGGAAAGCAGACGTGTGGAGCCTGGGCTGCACTGTGGTGGAGATGCTGACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR GCA 90 bp CATACTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCCACCACAGTGCAGCCCAATGCCCTCCAGGATCTaGCGCGTGTACTTTCGGGTC +
Preference number: 2 (lower is better)
Translates to: HTLPTVVSLSASPPQCSPMPSRI*RVYFRV
Trigger: GACCCGAAAGTACACGCGGCAGATCCTGGAGGGCAT...TGGGCTGCACTGTGGTGGAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CCA 90 bp CACAGACACGTGGTAGCGCCGGGGGTAGGTTCCACCTTTGACCCCTTTGTCATACTGCTCGCTGGTCTCTaGGATGAACTCCCCCTCACT +
Preference number: 2 (lower is better)
Translates to: HRHVVAPGVGSTFDPFVILLAGL*DELPLT
Trigger: AGTGAGGGGGAGTTCATCCCAGAGACCAGCGAGCAG...TATGACAAAGGGGTCAAAGGTGGAACCTACCCCCGGCGCTACCACGTGTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000585302.1
3UTR-3UTR TCA 90 bp TCTGTCAGCATCTCCACCACAGTGCAGCCCAGGCTCCACACGTCTGCTTTCCTTTGGAGGGCACCAGGGTaGACAAGTTGCCTTGATGAC +
Preference number: 2 (lower is better)
Translates to: SVSISTTVQPRLHTSAFLWRAPG*TSCLDD
Trigger: GTCATCAAGGCAACTTGTTCACCCTGGTGCCCTCCA...AAGGAAAGCAGACGTGTGGAGCCTGGGCTGCACTGTGGTGGAGATGCTGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CCA 90 bp CCAAAGTCCCCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCGGGCACTGGGAGACTTaGTTGGCACATTCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: PKSPSFTFPAESRRMLAPGHWET*LAHSSP
Trigger: AGGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCC...GGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGGGGACTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR CAA 90 bp TGTGCTCAGGGAGCGGCTGGAGGGCACCAGGGTGAACAAGTTGCCTaGATGACGCCGTATTCGGGGAAATGTTCTTCTGCCATCACTGTA +
Preference number: 2 (lower is better)
Translates to: CAQGAAGGHQGEQVA*MTPYSGKCSSAITV
Trigger: TACAGTGATGGCAGAAGAACATTTCCCCGAATACGGCGTCATCAAGGCAACTTGTTCACCCTGGTGCCCTCCAGCCGCTCCCTGAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR TCA 90 bp CAAAAATGCGCCTCAGGAAGTCCCGGCCATGTTCAGAGATGTGGGAGGGCAGCTCCCTTAATGTCCCGGTaGACAATCATGTTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: QKCASGSPGHVQRCGRAAPLMSR*TIMLLC
Trigger: GCACAGCAACATGATTGTTCACCGGGACATTAAGGG...AGCTGCCCTCCCACATCTCTGAACATGGCCGGGACTTCCTGAGGCGCATTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CCA 90 bp GGAAGAACAGAGCTGGCGGTTTTGGACACAGCTGGTGGTAGCATATGGGCTTTCACACTCTTCATACCCTaGCGTCAGTCTTGTGCCCCC +
Preference number: 2 (lower is better)
Translates to: GRTELAVLDTAGGSIWAFTLFIP*RQSCAP
Trigger: GGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGT...GAAAGCCCATATGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTGTTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR GCA 90 bp CATACTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCCACCACAGTGCAGCCCAGGTGAACAATCATGTTaGTGTGCAGGTAGGACATGC +
Preference number: 2 (lower is better)
Translates to: HTLPTVVSLSASPPQCSPGEQSC*CAGRTC
Trigger: GCATGTCCTACCTGCACAGCAACATGATTGTTCACC...TGGGCTGCACTGTGGTGGAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CCA 90 bp TCATTCATCTTTGGTAAAGGACAGGACTGGCAGAGCCAACCTGGGACTCTAGGGCCAGAGATGCCCTGGTaGTCTCCAGACATTGGAAGG +
Preference number: 2 (lower is better)
Translates to: SFIFGKGQDWQSQPGTLGPEMPW*SPDIGR
Trigger: CCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGG...CCCTAGAGTCCCAGGTTGGCTCTGCCAGTCCTGTCCTTTACCAAAGATGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp AAGTCCCCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTATTTCACCGAGCCCCCTaGCATGTACTCCATGAAGAT +
Preference number: 2 (lower is better)
Translates to: KSPSFTFPAESRRMLAPLFHRAP*HVLHED
Trigger: ATCTTCATGGAGTACATGCCAGGGGGCTCGGTGAAA...TAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGGGGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
3UTR-3UTR CCA 90 bp CTGTTGTCAGGGAAGCTCTGGGCACGGGACATTCGTGATTTCCGGAAGGATGGGTTACCAGTACTTGCCTaGATTCCAGAAGTTACTCAG +
Preference number: 2 (lower is better)
Translates to: LLSGKLWARDIRDFRKDGLPVLA*IPEVTQ
Trigger: CTGAGTAACTTCTGGAATCCAGGCAAGTACTGGTAA...CCCATCCTTCCGGAAATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585302.1
3UTR CAA 90 bp AACACTTTGAATGAAAATAACACTCTTCATACCCTGGCGTCAGTCTaGTGCCCCCAGACCCTCTGGGCTTCGGTGCCAATTGCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: NTLNENNTLHTLASV*CPQTLWASVPIAVS
Trigger: TGACACTGCAATTGGCACCGAAGCCCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGTTATTTTCATTCAAAGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CCA 90 bp GATTGGCAGCTTCCAGACAAGGAATTTTCTGCACTGCTCAGGGGATCCAGCATGGGAGAGGAACTGTTATaGTTTCTGTCCTGGGACAAC +
Preference number: 2 (lower is better)
Translates to: DWQLPDKEFSALLRGSSMGEELL*FLSWDN
Trigger: GTTGTCCCAGGACAGAAACCATAACAGTTCCTCTCC...CATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR GCA 90 bp AATCTTGAAGATGGCGGCCATAGCTTCATACTCTGCCCACGGTGGTTTCTCTGTCATAGTACTGCACGATaGGCTCATGCTGCAAGTTCT +
Preference number: 2 (lower is better)
Translates to: NLEDGGHSFILCPRWFLCHSTAR*AHAASS
Trigger: AGAACTTGCAGCATGAGCGCATCGTGCAGTACTATG...ACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATGGCCGCCATCTTCAAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR GCA 90 bp ATTGGCAGCTTCCAGACAAGGAATTTTCTGCACTGCTCAGGGGATCCAGCATGCCAGCAACAGGATCAGTaGTTAGATCTCTCAAGCTCA +
Preference number: 2 (lower is better)
Translates to: IGSFQTRNFLHCSGDPACQQQDQ*LDLSSS
Trigger: TGAGCTTGAGAGATCTAAGCACTGATCCTGTTGCTG...GCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585302.1
3UTR-3UTR CCA 90 bp GTCCCCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTAATGGTTTTTCAGCAGGATaGAGAGCTCATTGTTCATGT +
Preference number: 2 (lower is better)
Translates to: VPQLYIPSRVSEDVGSLNGFSAG*RAHCSC
Trigger: ACATGAACAATGAGCTCTCCATCCTGCTGAAAAACC...ATTAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR CCA 72 bp CTGAGCCCCAGTGGCGGAAGGGGCACAGACCGACGCTaGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCC +
Preference number: 3 (lower is better)
Translates to: LSPSGGRGTDRR*LGCHSMVHSLA
Trigger: GGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCCACTGGGGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
3UTR-3UTR CAA 90 bp TGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCCTGGGCCCACGGCTGCCTaGCACACTGTTCCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: WSGLWPSRSRLRQPETPPGPTAA*HTVPSP
Trigger: GGGGCTGGGAACAGTGTGCAAGGCAGCCGTGGGCCC...AGGAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR GCA 72 bp CGGCAGCCTGGGCCTCTGCCTGCCACTGCTAGCGAGTaGTGGCCTTTCCCTCAGGCTTGTGGGAGCTCATCC +
Preference number: 3 (lower is better)
Translates to: RQPGPLPATASE*WPFPQACGSSS
Trigger: GGATGAGCTCCCACAAGCCTGAGGGAAAGGCCAGCACTCGCTAGCAGTGGCAGGCAGAGGCCCAGGCTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CAA 90 bp TCAATGCAGCCTAGGCCCAAGCCCAAAGCAGGGGTACTCAGAGCCCAGAGGGCAGGGCCCACGGCTGCCTaGCACACTGTTCCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: SMQPRPKPKAGVLRAQRAGPTAA*HTVPSP
Trigger: GGGGCTGGGAACAGTGTGCAAGGCAGCCGTGGGCCC...TGCCCTCTGGGCTCTGAGTACCCCTGCTTTGGGCTTGGGCCTAGGCTGCATTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR TCA 72 bp AGGCACCCTGGCCCAGGAGCTTTCCCCGGCGCCAGTTaGTGGGGGCACTGGGAGACTTGGTTGGCACATTCC +
Preference number: 3 (lower is better)
Translates to: RHPGPGAFPGAS*WGHWETWLAHS
Trigger: GGAATGTGCCAACCAAGTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAAAGCTCCTGGGCCAGGGTGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR CCA 72 bp GGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTaGGGCCCACGGCTGCCTTGCACACTGTTCCCAGCC +
Preference number: 3 (lower is better)
Translates to: GANCSVRTHPRG*GPRLPCTLFPA
Trigger: GGCTGGGAACAGTGTGCAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR CCA 72 bp CCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTaGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: PRPCRPSPLLLQ*GTKAGPGAQRP
Trigger: TGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR GCA 72 bp TCCGCACTCCGCAGGCGCCCACGGGGGTCCAGGTATTaGACAGCCAGACCCATGTTCTCGCCATTTGTGCTC +
Preference number: 3 (lower is better)
Translates to: SALRRRPRGSRY*TARPMFSPFVL
Trigger: GAGCACAAATGGCGAGAACATGGGTCTGGCTGTGCAATACCTGGACCCCCGTGGGCGCCTGCGGAGTGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR GCA 72 bp CACGTCCCGTGTCCACGTCATAGCACAAATAGACCCTaGCGAAGGCACCCTGGCCCAGGAGCTTTCCCCGGC +
Preference number: 3 (lower is better)
Translates to: HVPCPRHSTNRP*RRHPGPGAFPG
Trigger: GCCGGGGAAAGCTCCTGGGCCAGGGTGCCTTCGGCAGGGTCTATTTGTGCTATGACGTGGACACGGGACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CAA 90 bp CCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTCAGCTCTACCCTGGCGTCAGTCTaGTGCCCCCAGACCCTCTGG +
Preference number: 3 (lower is better)
Translates to: PVGNKGWARSAKATTFSSTLASV*CPQTLW
Trigger: CCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGT...AGAGCTGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR TCA 72 bp GTGCTGCTGCCGCTCAGGAACATAGCCAGGGGGAGGTaGGCTTCGGCCAGGGTTCTGGGAGCCTTGACTTCT +
Preference number: 3 (lower is better)
Translates to: VLLPLRNIARGR*ASARVLGALTS
Trigger: AGAAGTCAAGGCTCCCAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTATGTTCCTGAGCGGCAGCAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585302.1
3UTR GCA 72 bp ACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTaGCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: TLAGLPLHGPQP*LGEAATSLSPA
Trigger: TGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
3UTR GCA 72 bp GGGGCACTGGGAGACTTGGTTGGCACATTCCTCTCCTaGACAGAGAGGGCATTCTCGCTGTCCGCACTCCGC +
Preference number: 3 (lower is better)
Translates to: GALGDLVGTFLS*TERAFSLSALR
Trigger: GCGGAGTGCGGACAGCGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CAA 90 bp CTGTTGTCAGGGAAGCTCTGGGCACGGGACATTCGTGATTTCCGGAAGGATGGGGCGGACTGGGAAGCCTaGATCCGCACCTGTCTGGAC +
Preference number: 3 (lower is better)
Translates to: LLSGKLWARDIRDFRKDGADWEA*IRTCLD
Trigger: GTCCAGACAGGTGCGGATCAAGGCTTCCCAGTCCGC...CCCATCCTTCCGGAAATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR TCA 72 bp ACTGGTCTTTCACCGAGCCCCCTGGCATGTACTCCATaGAGATGGTCAGGGTCTTCTCAGCGCGGTCCCGCA +
Preference number: 3 (lower is better)
Translates to: TGLSPSPLACTP*RWSGSSQRGPA
Trigger: TGCGGGACCGCGCTGAGAAGACCCTGACCATCTTCATGGAGTACATGCCAGGGGGCTCGGTGAAAGACCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
3UTR CCA 72 bp CATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTaGGCTTCGGTGCCAATTGCAGTGTCAGGACACATC +
Preference number: 3 (lower is better)
Translates to: HTLASVLCPQTL*ASVPIAVSGHI
Trigger: GATGTGTCCTGACACTGCAATTGGCACCGAAGCCCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR CCA 72 bp TCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTaGGCCAGGAGCGCAAAGGCCACAACCTTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: SISPSAPVGNKG*ARSAKATTFSS
Trigger: AGAGCTGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR CCA 72 bp GGAACAGGGATGGACACAGGAGGGTCCAGGCCCAACTaGCGCATGCGACACACACTTCTGCAAAACCAGCTG +
Preference number: 3 (lower is better)
Translates to: GTGMDTGGSRPN*RMRHTLLQNQL
Trigger: CAGCTGGTTTTGCAGAAGTGTGTGTCGCATGCGCCAGTTGGGCCTGGACCCTCCTGTGTCCATCCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
3UTR-3UTR CAA 90 bp AGCTCATCCAGCCCAGAGATGCCCTGGTGGTCTCCAGACATTGGAAGGAAAAACACCCTGGCGTCAGTCTaGTGCCCCCAGACCCTCTGG +
Preference number: 3 (lower is better)
Translates to: SSSSPEMPWWSPDIGRKNTLASV*CPQTLW
Trigger: CCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGT...GTTTTTCCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCTGGATGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CAA 90 bp AAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCTCAGTACATGAGCTGTGCAAAACGGGGGTCCAGGTATaGCACAGCCAGACCCATGTT +
Preference number: 3 (lower is better)
Translates to: KGDRQLCGRESSVHELCKTGVQV*HSQTHV
Trigger: AACATGGGTCTGGCTGTGCAATACCTGGACCCCCGT...TTTGCACAGCTCATGTACTGAGCTCTCACGGCCACACAGCTGCCGGTCGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR TCA 72 bp CATTTGTGCTCAGGGAGCGGCTGGAGGGCACCAGGGTaGACAAGTTGCCTTGATGACGCCGTATTCGGGGAA +
Preference number: 3 (lower is better)
Translates to: HLCSGSGWRAPG*TSCLDDAVFGE
Trigger: TTCCCCGAATACGGCGTCATCAAGGCAACTTGTTCACCCTGGTGCCCTCCAGCCGCTCCCTGAGCACAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR CCA 72 bp GCTGGTGGTAGCATATGGGCTTTCCCTTCTACCAGATaGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGG +
Preference number: 3 (lower is better)
Translates to: AGGSIWAFPSTR*SGLWPSRSRLR
Trigger: CCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATCTGGTAGAAGGGAAAGCCCATATGCTACCACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CAA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGCCATGGTCCACAGCCTaGCCTGGGAGAAGCAGCAAC +
Preference number: 3 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGPWSTA*PGRSSN
Trigger: GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGG...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR-3UTR CAA 90 bp GAGAGGGCATTCTCGCTGTCCGCACTCCGCAGGCGCCCACGGGGGTCCAGGTATAATACTGTTGTCACCTaGTGCTCCACATCTTCATAT +
Preference number: 3 (lower is better)
Translates to: ERAFSLSALRRRPRGSRYNTVVT*CSTSSY
Trigger: ATATGAAGATGTGGAGCACAAGGTGACAACAGTATT...ATACCTGGACCCCCGTGGGCGCCTGCGGAGTGCGGACAGCGAGAATGCCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CAA 90 bp AATCTTGAAGATGGCGGCCATAGCTTCATACTCTGCCCACGGTGGTTTCTCTGTTTTCCCCGGCGCCAGTaGATGGGGGCACTGGGAGAC +
Preference number: 3 (lower is better)
Translates to: NLEDGGHSFILCPRWFLCFPRRQ*MGALGD
Trigger: GTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAAA...ACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATGGCCGCCATCTTCAAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR TCA 72 bp GAGCTGTGCAAAGTGGTGTGTGAGCAGCTCCTCAGCTaGAGGTCTCTGGCGAGCCTCCACAAAAATGCGCCT +
Preference number: 3 (lower is better)
Translates to: ELCKVVCEQLLS*RSLASLHKNAP
Trigger: AGGCGCATTTTTGTGGAGGCTCGCCAGAGACCTTCAGCTGAGGAGCTGCTCACACACCACTTTGCACAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR GCA 72 bp CCCGGTGAACAATCATGTTGCTGTGCAGGTAGGACATaGCCTCCAGGATCTGCCGCGTGTACTTTCGGGTCA +
Preference number: 3 (lower is better)
Translates to: PGEQSCCCAGRT*PPGSAACTFGS
Trigger: TGACCCGAAAGTACACGCGGCAGATCCTGGAGGGCATGTCCTACCTGCACAGCAACATGATTGTTCACCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
3UTR-3UTR CAA 90 bp CAGGGATGGACACAGGAGGGTCCAGGCCCAACTGGCGCATGCGACACACACTTCTTGCTTCATTCATCTTaGGTAAAGGACAGGACTGGC +
Preference number: 3 (lower is better)
Translates to: QGWTQEGPGPTGACDTHFLLHSS*VKDRTG
Trigger: GCCAGTCCTGTCCTTTACCAAAGATGAATGAAGCAA...GAAGTGTGTGTCGCATGCGCCAGTTGGGCCTGGACCCTCCTGTGTCCATCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
3UTR TCA 72 bp CAGACACGTGGTAGCGCCGGGGGTAGGTTCCACCTTTaGCCCCTTTGTCATAAAGCTGAGTTTCCCGATCTG +
Preference number: 3 (lower is better)
Translates to: QTRGSAGGRFHL*PLCHKAEFPDL
Trigger: CAGATCGGGAAACTCAGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACCCCCGGCGCTACCACGTGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000585302.1
3UTR TCA 72 bp TCTGTTGTCAGGGAAGCTCTGGGCACGGGACATTCGTaGTTTCCGGAAGGATGGGCTGTCCAAGGATTGGCA +
Preference number: 3 (lower is better)
Translates to: SVVREALGTGHS*FPEGWAVQGLA
Trigger: TGCCAATCCTTGGACAGCCCATCCTTCCGGAAATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585302.1
3UTR GCA 72 bp AGGAGCGCAAAGGCCACAACCTTCAGCTCTTTTCAATaGAGCCTAGGCCCAAGCCCAAAGCAGGGGTACTCA +
Preference number: 3 (lower is better)
Translates to: RSAKATTFSSFQ*SLGPSPKQGYS
Trigger: TGAGTACCCCTGCTTTGGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAAGGTTGTGGCCTTTGCGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR GCA 72 bp CAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATaGGCTCATGCTGCAAGTTCTTTAGCAACTGGATCT +
Preference number: 3 (lower is better)
Translates to: QRGPADSHSTAR*AHAASSLATGS
Trigger: AGATCCAGTTGCTAAAGAACTTGCAGCATGAGCGCATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
3UTR GCA 72 bp GTCCAAGGATTGGCAGCTTCCAGACAAGGAATTTTCTaGACTGCTCAGGGGATCCAGCATGCACTGCTCGCT +
Preference number: 3 (lower is better)
Translates to: VQGLAASRQGIF*TAQGIQHALLA
Trigger: AGCGAGCAGTGCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAATCCTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000585302.1
3UTR GCA 72 bp GGCAATCTTGAAGATGGCGGCCATAGCTTCATACTCTaGCCACGGTGGTTTCTCTGTCAGCATCTCCACCAC +
Preference number: 3 (lower is better)
Translates to: GNLEDGGHSFIL*PRWFLCQHLHH
Trigger: GTGGTGGAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATGGCCGCCATCTTCAAGATTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR CCA 72 bp CGGAAGGATGGGCTGTCTGCTGACCTGTCCAAGGATTaGCAGCTTCCAGACAAGGAATTTTCTGCACTGCTC +
Preference number: 3 (lower is better)
Translates to: RKDGLSADLSKD*QLPDKEFSALL
Trigger: GAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGGTCAGCAGACAGCCCATCCTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR CCA 72 bp CGATCTGAGTATTCCTGTCTGTTGTCAGGGAAGCTCTaGGCACGGGACATTCGTGATTTCCGGAAGGATGGG +
Preference number: 3 (lower is better)
Translates to: RSEYSCLLSGKL*ARDIRDFRKDG
Trigger: CCCATCCTTCCGGAAATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAACAGACAGGAATACTCAGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000585302.1
3UTR-3UTR CAA 90 bp ACAAAAATGCGCCTCAGGAAGTCCCGGCCATGTTCAGAGATGTGGGAGGGCAGCGTTGTCCAAATACTGTaGTCACCTTGTGCTCCACAT +
Preference number: 3 (lower is better)
Translates to: TKMRLRKSRPCSEMWEGSVVQIL*SPCAPH
Trigger: ATGTGGAGCACAAGGTGACAACAGTATTTGGACAAC...GCTGCCCTCCCACATCTCTGAACATGGCCGGGACTTCCTGAGGCGCATTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CAA 90 bp GGATTGGTGGGCTGGGTGGCAATCTTGAAGATGGCGGCCATAGCTTCATACTCTTCAAATTGGACCTGCTaGGAAGCAAGTTCACGTCCC +
Preference number: 3 (lower is better)
Translates to: GLVGWVAILKMAAIASYSSNWTC*EASSRP
Trigger: GGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTGA...AGAGTATGAAGCTATGGCCGCCATCTTCAAGATTGCCACCCAGCCCACCAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CAA 90 bp AGGATGGGCTGTCCAAGGATTGGCAGCTTCCAGACAAGGAATTTTCTGCACTGCAGGGTTCTGGGAGCCTaGACTTCTGTCTCTGTTTCC +
Preference number: 3 (lower is better)
Translates to: RMGCPRIGSFQTRNFLHCRVLGA*TSVSVS
Trigger: GGAAACAGAGACAGAAGTCAAGGCTCCCAGAACCCT...GCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585302.1
3UTR-3UTR CAA 90 bp AAGTCCCCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTAACTGTCTGGATCAAATaGGACCTGCTTGGAAGCAAG +
Preference number: 3 (lower is better)
Translates to: KSPSFTFPAESRRMLAPLTVWIK*DLLGSK
Trigger: CTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAGT...TAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGGGGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CAA 90 bp GAAGGATGGGCTGTCCAAGGATTGGCAGCTTCCAGACAAGGAATTTTCTGCACTCCCTTCCAGAAAGTCTaGTCTGTACCAGCACACAGC +
Preference number: 3 (lower is better)
Translates to: EGWAVQGLAASRQGIFCTPFQKV*SVPAHS
Trigger: GCTGTGTGCTGGTACAGACAAGACTTTCTGGAAGGG...AGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCCATCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585302.1
3UTR-3UTR CAA 90 bp TGGTTGGCACATTCCTCTCCTGCACAGAGAGGGCATTCTCGCTGTCCGCACTCCTTTATCAAGATCATCTaGGTTTTTCAGCAGGATGGA +
Preference number: 3 (lower is better)
Translates to: WLAHSSPAQRGHSRCPHSFIKII*VFQQDG
Trigger: TCCATCCTGCTGAAAAACCAAGATGATCTTGATAAA...GGAGTGCGGACAGCGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCCAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
3UTR-3UTR CAA 90 bp GCACACAGCAAGCACTCAAACATTACCAGTACTTGCCTGGATTCCAGAAGTTACCCCTCAGGAGGCATATaGCAAACAGACAAACTCAGC +
Preference number: 3 (lower is better)
Translates to: AHSKHSNITSTCLDSRSYPSGGI*QTDKLS
Trigger: GCTGAGTTTGTCTGTTTGCAATATGCCTCCTGAGGG...GTAACTTCTGGAATCCAGGCAAGTACTGGTAATGTTTGAGTGCTTGCTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585302.1
3UTR GCA 72 bp AGATCAAGAGGTTGTCCAAATACTGTTGTCACCTTGTaGTCCACATCTTCATATTTCACAGGCCGGCTGAAC +
Preference number: 3 (lower is better)
Translates to: RSRGCPNTVVTL*STSSYFTGRLN
Trigger: GTTCAGCCGGCCTGTGAAATATGAAGATGTGGAGCACAAGGTGACAACAGTATTTGGACAACCTCTTGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCGTGGCATCGGCAGGGTaGCCCGCTACATCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSVASAG*PATSRA
Trigger: CGCCCGGGATGTAGCGGGCCACCCTGCCGATGCCAC...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000584573.5
CDS-3UTR CCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCTCGCGGGCCCCTGCCTaGGAGAGGCAGGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGSRAPA*ERQGHG
Trigger: GCCATGACCCTGCCTCTCCCAGGCAGGGGCCCGCGA...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCCCAGCAGCAGCCCCCTaGCATGCAGCAAAGGGCGAC +
Preference number: 4 (lower is better)
Translates to: AQQQPPAMQQRATGSCVAPAAAP*HAAKGD
Trigger: GTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCACATCGCGGGCCCCTaGCTGGGAGAGGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGHIAGP*LGEAGS
Trigger: TGACCCTGCCTCTCCCAGGCAGGGGCCCGCGATGTG...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTCGTCCATGGTGGCGATaGCGGCGGCGGTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRRPWWR*RRRWLR
Trigger: CCTTAGCCACCGCCGCCGCCATCGCCACCATGGACG...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCTGTTCGTCCATGGTaGCGATGGCGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWPVRPW*RWRRRW
Trigger: CCACCGCCGCCGCCATCGCCACCATGGACGAACAGG...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CTCCTGCACAGAGAGGGCATTCTCGCTGTCCGCACTCCGCAGGCGCCCACGGGGCCTGTTCGTCCATGGTaGCGATGGCGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LLHREGILAVRTPQAPTGPVRPW*RWRRRW
Trigger: CCACCGCCGCCGCCATCGCCACCATGGACGAACAGG...CCCCGTGGGCGCCTGCGGAGTGCGGACAGCGAGAATGCCCTCTCTGTGCAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCCTGTTCGTCCATGGTaGCGATGGCGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSPVRPW*RWRRRW
Trigger: CCACCGCCGCCGCCATCGCCACCATGGACGAACAGG...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGCCTCCTGTTCGTCCATaGTGGCGATGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVPPVRP*WRWRRR
Trigger: CCGCCGCCGCCATCGCCACCATGGACGAACAGGAGG...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGCCTCCTGTTCGTCCATaGTGGCGATGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREPPVRP*WRWRRR
Trigger: CCGCCGCCGCCATCGCCACCATGGACGAACAGGAGG...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCCAGACCGACGCTGGCTaGGCTGCCACTCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: AQQQPPAMQQRATGSCVAQTDAG*AATPWS
Trigger: GGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTG...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCACACATCCCCGAGGGTaGGGCCCACGGCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AAPCHAAKGDRQLCGRESTHPRG*GPRLPC
Trigger: GCAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGT...GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGCCTCCTCGGGCTCTCTaGGATCAGGGCACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPPPRAL*DQGTGQ
Trigger: CTGGCCAGTGCCCTGATCCCAGAGAGCCCGAGGAGG...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGTTCCCCGGCGCCAGTTaGTGGGGGCACTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWFPGAS*WGHWET
Trigger: AGTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAA...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCTTCCCCGGCGCCAGTTaGTGGGGGCACTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: AAPCHAAKGDRQLCGRESFPGAS*WGHWET
Trigger: AGTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAA...GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCAGTAGGGTGTGCCAGTaGCGGAGCGCATGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGSRVCQ*RSACPS
Trigger: GGACGGGCATGCGCTCCGTCACTGGCACACCCTACT...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCAGCAGCCCCCTGCCATaGAGCAAAGGGCGACCGGCA +
Preference number: 4 (lower is better)
Translates to: AEGAQTDAGWAATPWSTASSPLP*SKGRPA
Trigger: TGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCT...GGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGCCAGCAGCAGCCCCCTaGCATGCAGCAAAGGGCGAC +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREPAAAP*HAAKGD
Trigger: GTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCCAGCAGCAGCCCCCTaGCATGCAGCAAAGGGCGAC +
Preference number: 4 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSPAAAP*HAAKGD
Trigger: GTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCCCAGCAGCAGCCCCCTaGCATGCAGCAAAGGGCGAC +
Preference number: 4 (lower is better)
Translates to: AEGAQTDAGWAATPWSTAPAAAP*HAAKGD
Trigger: GTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG...GGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGGGCAGCCTGGGCCTCTaGCTGCCACTGCTAGCGAGT +
Preference number: 4 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWGSLGL*LPLLAS
Trigger: ACTCGCTAGCAGTGGCAGGCAGAGGCCCAGGCTGCC...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGGGCAGCCTGGGCCTCTaGCTGCCACTGCTAGCGAGT +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVGSLGL*LPLLAS
Trigger: ACTCGCTAGCAGTGGCAGGCAGAGGCCCAGGCTGCC...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGACGTCCATGGTGGCGATaGCGGCGGCGGTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRRPWWR*RRRWLR
Trigger: CCTTAGCCACCGCCGCCGCCATCGCCACCATGGACG...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GTGGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACACGTCCATGGTGGCGATaGCGGCGGCGGTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: VAEGAQTDAGWAATPWSTRPWWR*RRRWLR
Trigger: CCTTAGCCACCGCCGCCGCCATCGCCACCATGGACG...TGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCAGACCGACGCTGGCTaGGCTGCCACTCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGQTDAG*AATPWS
Trigger: GGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTG...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGGCACAGACCGACGCTaGCTGGGCTGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRGTDRR*LGCHSM
Trigger: CATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGCTGGATCTGACAGGCTaGGGGCTCCCAGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPLDLTG*GLPVLR
Trigger: CCTCAGGACTGGGAGCCCCCAGCCTGTCAGATCCAG...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCCTGGATCTGACAGGCTaGGGGCTCCCAGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AQQQPPAMQQRATGSCVALDLTG*GLPVLR
Trigger: CCTCAGGACTGGGAGCCCCCAGCCTGTCAGATCCAG...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCATAGCCAGGGGGAGGTaGGCTTCGGCCAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: AAPCHAAKGDRQLCGRESIARGR*ASARVL
Trigger: CAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTAT...GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGATAGCCAGGGGGAGGTaGGCTTCGGCCAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVIARGR*ASARVL
Trigger: CAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTAT...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCATAGCCAGGGGGAGGTaGGCTTCGGCCAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: AEGAQTDAGWAATPWSTAIARGR*ASARVL
Trigger: CAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTAT...GGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGATTCCCCGGCGCCAGTTaGTGGGGGCACTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRFPGAS*WGHWET
Trigger: AGTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAA...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCGAGCAGCTCCTCAGCTaGAGGTCTCTGGCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: AEGAQTDAGWAATPWSTAEQLLS*RSLASL
Trigger: GAGGCTCGCCAGAGACCTTCAGCTGAGGAGCTGCTC...GGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCATGGGCGAGGCTGGCTaGGGAAGAACAGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSMGEAG*GRTELA
Trigger: CGCCAGCTCTGTTCTTCCTCAGCCAGCCTCGCCCAT...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCCCCTGCCGGGCAATGTaGTGCTGCCGCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: AEGAQTDAGWAATPWSTAPCRAM*CCRSGT
Trigger: TGTTCCTGAGCGGCAGCAGCACATTGCCCGGCAGGG...GGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTCCCTGCCGGGCAATGTaGTGCTGCCGCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRPCRAM*CCRSGT
Trigger: TGTTCCTGAGCGGCAGCAGCACATTGCCCGGCAGGG...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCACATCGCGGGCCCCTaGCTGGGAGAGGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: EGAQTDAGWAATPWSTALHIAGP*LGEAGS
Trigger: TGACCCTGCCTCTCCCAGGCAGGGGCCCGCGATGTG...CAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCTGGGGGCTCCCAGTGGCATCGGCAGGGTaGCCCGCTACATCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: HAELRTLELLDLTGWGLPVASAG*PATSRA
Trigger: CGCCCGGGATGTAGCGGGCCACCCTGCCGATGCCAC...TGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp CGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCCTGTTCGTCCATGGTaGCGATGGCGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RRWLGCHSMVHSLAWEKQPVRPW*RWRRRW
Trigger: CCACCGCCGCCGCCATCGCCACCATGGACGAACAGG...CTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCCTTCGGCCAGGGTTCTaGGAGCTGACAGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: AQQQPPAMQQRATGSCVALRPGF*ELTERC
Trigger: GCACCTCTCTGTCAGCTCCCAGAACCCTGGCCGAAG...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGCTTCGGCCAGGGTTCTaGGAGCTGACAGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPLRPGF*ELTERC
Trigger: GCACCTCTCTGTCAGCTCCCAGAACCCTGGCCGAAG...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp AAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGCCGAAGGCACCCTaGCCCAGGAGCTTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: KGHRPTLAGLPLHGPQPCLPKAP*PRSFPR
Trigger: CCGGGGAAAGCTCCTGGGCCAGGGTGCCTTCGGCAG...GCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGACTGCCGAAGGCACCCTaGCCCAGGAGCTTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: HRPTLAGLPLHGPQPCLGLPKAP*PRSFPR
Trigger: CCGGGGAAAGCTCCTGGGCCAGGGTGCCTTCGGCAG...TCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCTCCTGGATCTGACAGGCTGGGGGCTCCCAGTCCTGAGGCTGCAGCCACCCCACAGACCGACGCTGGCTaGGCTGCCACTCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: APGSDRLGAPSPEAAATPQTDAG*AATPWS
Trigger: GGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTG...TGGGGTGGCTGCAGCCTCAGGACTGGGAGCCCCCAGCCTGTCAGATCCAGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGCAGACCGACGCTGGCTaGGCTGCCACTCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: GTDRRWLGCHSMVHSLAWQTDAG*AATPWS
Trigger: GGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTG...CCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCTCGCGGGCCCCTGCCTaGGAGAGGCAGGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCSRAPA*ERQGHG
Trigger: GCCATGACCCTGCCTCTCCCAGGCAGGGGCCCGCGA...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGGTGGGGAACAAAGGCTaGGCCAGGAGCGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREVGNKG*ARSAKA
Trigger: GGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCAC...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCCCCCTTCTGCTCCAGTaGGGAACAAAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: AQQQPPAMQQRATGSCVAPLLLQ*GTKAGP
Trigger: TGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGG...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGCAGCCACCAAGATaGGGTCGTAGAGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: AQQQPPAMQQRATGSCVAVQPPR*GRREAE
Trigger: CTCGGCCTCTCTACGACCCCATCTTGGTGGCTGCAC...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGCGGACTGGGAAGCCTTaGTCCGCACCTGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVRTGKP*SAPVWT
Trigger: TGTCCAGACAGGTGCGGATCAAGGCTTCCCAGTCCG...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCTCCTGGATCTGACAGGCTGGGGGCTCCCAGTCCTGAGGCTGCAGCCACCCCAATAGCCAGGGGGAGGTaGGCTTCGGCCAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: APGSDRLGAPSPEAAATPIARGR*ASARVL
Trigger: CAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTAT...TGGGGTGGCTGCAGCCTCAGGACTGGGAGCCCCCAGCCTGTCAGATCCAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGACTCCCCCTCACTGTTaGTGCTGGTGTAGGACCCCT +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPTPPHC*CWCRTP
Trigger: AGGGGTCCTACACCAGCATCAACAGTGAGGGGGAGT...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp AAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCTTCCCCGGCGCCAGTTaGTGGGGGCACTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: KGHRPTLAGLPLHGPQPCFPGAS*WGHWET
Trigger: AGTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAA...GCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGAGTAGGGTGTGCCAGTaGCGGAGCGCATGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: EGAQTDAGWAATPWSTALSRVCQ*RSACPS
Trigger: GGACGGGCATGCGCTCCGTCACTGGCACACCCTACT...CAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGACATAGCCCTCGCCGCTaGTCACCTCAGGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRHSPRR*SPQGSS
Trigger: GGATGAGCCCTGAGGTGATCAGCGGCGAGGGCTATG...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAAGCAGCAACTTCACTaGGCCCAGCAGCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVKQQLH*AQQQPP
Trigger: AGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTT...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGATGGAGCTCCTGGATCTaGCAGGCTGGGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HRPTLAGLPLHGPQPCLGWSSWI*QAGGSQ
Trigger: CTGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCA...TCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGCAGCTTTGGTCAAGATaGGGGCCAGGCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: GTDRRWLGCHSMVHSLAWQLWSR*GPGPTL
Trigger: CAGGGTGGGGCCTGGCCCTCATCTTGACCAAAGCTG...CCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR GCA 90 bp GTGGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACACCCTGCCGGGCAATGTaGTGCTGCCGCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: VAEGAQTDAGWAATPWSTPCRAM*CCRSGT
Trigger: TGTTCCTGAGCGGCAGCAGCACATTGCCCGGCAGGG...TGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCAGCACAAATAGACCCTaGCGAAGGCACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: AQQQPPAMQQRATGSCVASTNRP*RRHPGP
Trigger: TGGGCCAGGGTGCCTTCGGCAGGGTCTATTTGTGCT...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTTGTGCAGGTAGGACATaGCCTCCAGGATCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRCAGRT*PPGSAA
Trigger: CGCGGCAGATCCTGGAGGGCATGTCCTACCTGCACA...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCTCGTCTGCAGGCGTTTaGTGGCCCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSSSAGV*WPQSPP
Trigger: TGGGGGACTTTGGGGCCAGCAAACGCCTGCAGACGA...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGTCGTCTGCAGGCGTTTaGTGGCCCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWSSAGV*WPQSPP
Trigger: TGGGGGACTTTGGGGCCAGCAAACGCCTGCAGACGA...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTTCGTCTGCAGGCGTTTaGTGGCCCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRSSAGV*WPQSPP
Trigger: TGGGGGACTTTGGGGCCAGCAAACGCCTGCAGACGA...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCGCATCTCCACCACAGTaGAGCCCAGGCTCCACACGT +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGASPPQ*SPGSTR
Trigger: ACGTGTGGAGCCTGGGCTGCACTGTGGTGGAGATGC...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGAGCAGCCCCCTGCCATaGAGCAAAGGGCGACCGGCA +
Preference number: 4 (lower is better)
Translates to: EGAQTDAGWAATPWSTALSSPLP*SKGRPA
Trigger: TGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCT...CAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp ACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGCCAGCAGCAGCCCCCTaGCATGCAGCAAAGGGCGAC +
Preference number: 4 (lower is better)
Translates to: TDRRWLGCHSMVHSLAWEPAAAP*HAAKGD
Trigger: GTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG...CTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGACACATCCCCGAGGGTGGGGCCCACGGCTGCCTTGCACACTGTTCCCAGCCCGCCACTGCTAGCGAGTaGTGGCCTTTCCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GHIPEGGAHGCLAHCSQPATASE*WPFPQA
Trigger: AGCCTGAGGGAAAGGCCAGCACTCGCTAGCAGTGGC...GGGCTGGGAACAGTGTGCAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACACATCGCGGGCCCCTaGCTGGGAGAGGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQHIAGP*LGEAGS
Trigger: TGACCCTGCCTCTCCCAGGCAGGGGCCCGCGATGTG...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAACTGGCCAGGCCAGATaGCCCGACCGTGTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRTGQAR*PDRVVH
Trigger: ATGGACGACACGGTCGGGGCATCTGGCCTGGCCAGT...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGACTGGCCAGGCCAGATaGCCCGACCGTGTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: GTDRRWLGCHSMVHSLAWTGQAR*PDRVVH
Trigger: ATGGACGACACGGTCGGGGCATCTGGCCTGGCCAGT...CCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCACGTCCATGGTGGCGATaGCGGCGGCGGTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPRPWWR*RRRWLR
Trigger: CCTTAGCCACCGCCGCCGCCATCGCCACCATGGACG...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GGTGTGCCAGTGACGGAGCGCATGCCCGTCCCCGACATACAGATCGTCTGCAGGCCTCCTGTTCGTCCATaGTGGCGATGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GVPVTERMPVPDIQIVCRPPVRP*WRWRRR
Trigger: CCGCCGCCGCCATCGCCACCATGGACGAACAGGAGG...CCTGCAGACGATCTGTATGTCGGGGACGGGCATGCGCTCCGTCACTGGCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp CTCCTGCACAGAGAGGGCATTCTCGCTGTCCGCACTCCGCAGGCGCCCACGGGGCTTCGGCCAGGGTTCTaGGAGCTGACAGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLHREGILAVRTPQAPTGLRPGF*ELTERC
Trigger: GCACCTCTCTGTCAGCTCCCAGAACCCTGGCCGAAG...CCCCGTGGGCGCCTGCGGAGTGCGGACAGCGAGAATGCCCTCTCTGTGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCTGCCGAAGGCACCCTaGCCCAGGAGCTTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCLPKAP*PRSFPR
Trigger: CCGGGGAAAGCTCCTGGGCCAGGGTGCCTTCGGCAG...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGTCTGCAGGCGTTTGCTaGCCCCAAAGTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWSAGVC*PQSPPA
Trigger: AGCTGGGGGACTTTGGGGCCAGCAAACGCCTGCAGA...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCTTCGGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCGGCACAGACCGACGCTaGCTGGGCTGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: ASVPIAVSGHIPEGGAHGGTDRR*LGCHSM
Trigger: CATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC...GCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGGAGAGGCAGGGTCATaGCCACAGGCAGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRGEAGS*PQAGQA
Trigger: AGCCTGTCCTGCCTGTGGCCATGACCCTGCCTCTCC...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCCTCCTCGGGCTCTCTaGGATCAGGGCACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RRWLGCHSMVHSLAWEKQPPRAL*DQGTGQ
Trigger: CTGGCCAGTGCCCTGATCCCAGAGAGCCCGAGGAGG...CTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGAGATGGAGTGGGCTCTaGCCTAGCAGGTCACGACTC +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPRWSGL*PSRSRL
Trigger: GAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATCT...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCGAGACCTCAAGGGGATaGGCGAGGCTGGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGETSRG*ARLAEE
Trigger: TTCCTCAGCCAGCCTCGCCCATCCCCTTGAGGTCTC...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GCTTCGGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCGAAGGGGCAGGAGGGTaGCAGAGTGCGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: ASVPIAVSGHIPEGGAHGEGAGG*QSADCP
Trigger: GGGACAGTCCGCACTCTGCCACCCTCCTGCCCCTTC...GCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACCGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTTATCCAGGCATCCGGTaGCGTCGGTTCATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRYPGIR*RRFIWR
Trigger: CCTCCAGATGAACCGACGTCACCGGATGCCTGGATA...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGACTCCCCCTCACTGTTaGTGCTGGTGTAGGACCCCT +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGRETPPHC*CWCRTP
Trigger: AGGGGTCCTACACCAGCATCAACAGTGAGGGGGAGT...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCGGCACGGGACATTCGTaGTTTCCGGAAGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGGTGHS*FPEGWA
Trigger: AGCCCATCCTTCCGGAAATCACGAATGTCCCGTGCC...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGGGCACGGGACATTCGTaGTTTCCGGAAGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWGTGHS*FPEGWA
Trigger: AGCCCATCCTTCCGGAAATCACGAATGTCCCGTGCC...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCTGGGGGCTCCCAAGTAGGGTGTGCCAGTaGCGGAGCGCATGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: HAELRTLELLDLTGWGLPSRVCQ*RSACPS
Trigger: GGACGGGCATGCGCTCCGTCACTGGCACACCCTACT...TGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp TGGCCAGGCCAGATGCCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGAGCAGCTCCTCAGCTaGAGGTCTCTGGCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: WPGQMPRPCRPSPLLLQWEQLLS*RSLASL
Trigger: GAGGCTCGCCAGAGACCTTCAGCTGAGGAGCTGCTC...CCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGGCATCTGGCCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp ACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCATGGAGCTCCTGGATCTaGCAGGCTGGGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TLAGLPLHGPQPCLGEAAWSSWI*QAGGSQ
Trigger: CTGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCA...TGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGGACCAGCGCCCAGGCTaGGGTAAATATGGCCAACTC +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREDQRPG*GKYGQL
Trigger: GAGTTGGCCATATTTACCTCAGCCTGGGCGCTGGTC...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGCGCCTCTCCCCGTTGTaGTCGAACTTGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPRLSPL*SNLILT
Trigger: CGTCAGAATCAAGTTCGAGCACAACGGGGAGAGGCG...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCTGTTCTCGCCATTTGTaGTCAGGGAGCGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSCSRHL*SGSGWR
Trigger: CCTCCAGCCGCTCCCTGAGCACAAATGGCGAGAACA...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCTGTTCTCGCCATTTGTaGTCAGGGAGCGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AAPCHAAKGDRQLCGRESCSRHL*SGSGWR
Trigger: CCTCCAGCCGCTCCCTGAGCACAAATGGCGAGAACA...GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTCGGGGGTCCAGGTATTaGACAGCCAGACCCATGTTC +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRRGSRY*TARPMF
Trigger: GAACATGGGTCTGGCTGTGCAATACCTGGACCCCCG...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGGGGGTCCAGGTATTaGACAGCCAGACCCATGTTC +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGRGSRY*TARPMF
Trigger: GAACATGGGTCTGGCTGTGCAATACCTGGACCCCCG...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGGGCACATTCCTCTCCTaGACAGAGAGGGCATTCTCG +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPGTFLS*TERAFS
Trigger: CGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCC...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCACAAATAGACCCTaGCGAAGGCACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGRESTNRP*RRHPGP
Trigger: TGGGCCAGGGTGCCTTCGGCAGGGTCTATTTGTGCT...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGATGCCCTCCAGGATCTaGCGCGTGTACTTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVMPSRI*RVYFRV
Trigger: GACCCGAAAGTACACGCGGCAGATCCTGGAGGGCAT...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTATGCCCTCCAGGATCTaGCGCGTGTACTTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRMPSRI*RVYFRV
Trigger: GACCCGAAAGTACACGCGGCAGATCCTGGAGGGCAT...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGCAGGCTCCACACGTCTaGTTTCCTTCCATAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPQAPHV*FPSIAL
Trigger: GAGGGCTATGGAAGGAAAGCAGACGTGTGGAGCCTG...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGGAGCCTCCACAAAAATaGGCCTCAGGAAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVEPPQK*ASGSPG
Trigger: GCCGGGACTTCCTGAGGCGCATTTTTGTGGAGGCTC...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCAGCAGCCCCCTGCCATaGAGCAAAGGGCGACCGGCA +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCSSPLP*SKGRPA
Trigger: TGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCT...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGGGCTTCGGTGCCAATTaGAGTGTCAGGACACATCCC +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPGFGAN*SVRTHP
Trigger: GGGATGTGTCCTGACACTGCAATTGGCACCGAAGCC...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCATCCAGCCCAGAGATaGCCTGGTGGTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGHPAQR*PGGLQT
Trigger: TGTCTGGAGACCACCAGGGCATCTCTGGGCTGGATG...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAACTGGCCAGGCCAGATaGCCCGACCGTGTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: HRPTLAGLPLHGPQPCLGTGQAR*PDRVVH
Trigger: ATGGACGACACGGTCGGGGCATCTGGCCTGGCCAGT...TCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCACGTCCATGGTGGCGATaGCGGCGGCGGTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: RPCRPSPLLLQWGTKAGPRPWWR*RRRWLR
Trigger: CCTTAGCCACCGCCGCCGCCATCGCCACCATGGACG...TGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CAGGGATGGACACAGGAGGGTCCAGGCCCAACTGGCGCATGCGACACACACTTCCCTGTTCGTCCATGGTaGCGATGGCGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QGWTQEGPGPTGACDTHFPVRPW*RWRRRW
Trigger: CCACCGCCGCCGCCATCGCCACCATGGACGAACAGG...GAAGTGTGTGTCGCATGCGCCAGTTGGGCCTGGACCCTCCTGTGTCCATCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCCTCCTGTTCGTCCATaGTGGCGATGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQEPPVRP*WRWRRR
Trigger: CCGCCGCCGCCATCGCCACCATGGACGAACAGGAGG...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGCTGCTCGCTGGTCTCTaGGATGAACTCCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVLLAGL*DELPLT
Trigger: AGTGAGGGGGAGTTCATCCCAGAGACCAGCGAGCAG...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCTGCTCGCTGGTCTCTaGGATGAACTCCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWLLAGL*DELPLT
Trigger: AGTGAGGGGGAGTTCATCCCAGAGACCAGCGAGCAG...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGCTGCTCGCTGGTCTCTaGGATGAACTCCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGRELLAGL*DELPLT
Trigger: AGTGAGGGGGAGTTCATCCCAGAGACCAGCGAGCAG...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGGGGCACTGGGAGACTTaGTTGGCACATTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPGHWET*LAHSSP
Trigger: AGGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCC...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATCTGCCGAAGGCACCCTaGCCCAGGAGCTTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHLPKAP*PRSFPR
Trigger: CCGGGGAAAGCTCCTGGGCCAGGGTGCCTTCGGCAG...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCTGCCGAAGGCACCCTaGCCCAGGAGCTTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLLPKAP*PRSFPR
Trigger: CCGGGGAAAGCTCCTGGGCCAGGGTGCCTTCGGCAG...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGATCTGCAGGCGTTTGCTaGCCCCAAAGTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRSAGVC*PQSPPA
Trigger: AGCTGGGGGACTTTGGGGCCAGCAAACGCCTGCAGA...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp TGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCTGCCTTGGGCACAGACCGACGCTaGCTGGGCTGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: CQLQCQDTSPRVGPTAALGTDRR*LGCHSM
Trigger: CATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC...CAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCACACATCCCCGAGGGTaGGGCCCACGGCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PSAPVGNKGWARSAKATTTHPRG*GPRLPC
Trigger: GCAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGT...GGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCAGATGGAGTGGGCTCTaGCCTAGCAGGTCACGACTC +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGRWSGL*PSRSRL
Trigger: GAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATCT...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGGGGATGGGCGAGGCTaGCTGAGGAAGAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRGDGRG*LRKNRA
Trigger: AGCTCTGTTCTTCCTCAGCCAGCCTCGCCCATCCCC...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCTGCGCAACACTGGCCTaGCTTTGCACTGCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGCATLA*LCTASP
Trigger: AGGGCTTGCAGTGCAAAGCCAGGCCAGTGTTGCGCA...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGATATCCAGGCATCCGGTaGCGTCGGTTCATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRYPGIR*RRFIWR
Trigger: CCTCCAGATGAACCGACGTCACCGGATGCCTGGATA...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTCGGACTGGGAAGCCTTaGTCCGCACCTGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLRTGKP*SAPVWT
Trigger: TGTCCAGACAGGTGCGGATCAAGGCTTCCCAGTCCG...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCTGGAGGGCACCAGGGTaGACAAGTTGCCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGWRAPG*TSCLDD
Trigger: GTCATCAAGGCAACTTGTTCACCCTGGTGCCCTCCA...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATTTCCCCGGCGCCAGTTaGTGGGGGCACTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHFPGAS*WGHWET
Trigger: AGTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAA...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp TGTAGGACCCCTGCCGGGCAATGTGCTGCTGCCGCTCAGGAACATAGCCAGGGGCATAGCCCTCGCCGCTaGTCACCTCAGGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: CRTPAGQCAAAAQEHSQGHSPRR*SPQGSS
Trigger: GGATGAGCCCTGAGGTGATCAGCGGCGAGGGCTATG...CCCCTGGCTATGTTCCTGAGCGGCAGCAGCACATTGCCCGGCAGGGGTCCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCACATAGCCCTCGCCGCTaGTCACCTCAGGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPHSPRR*SPQGSS
Trigger: GGATGAGCCCTGAGGTGATCAGCGGCGAGGGCTATG...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GGACACATCCCCGAGGGTGGGGCCCACGGCTGCCTTGCACACTGTTCCCAGCCCGTGCAAAGTGGTGTGTaGGCAGCTCCTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GHIPEGGAHGCLAHCSQPVQSGV*AAPQLK
Trigger: CTTCAGCTGAGGAGCTGCTCACACACCACTTTGCAC...GGGCTGGGAACAGTGTGCAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGGTGCAAAGTGGTGTGTaGGCAGCTCCTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREVQSGV*AAPQLK
Trigger: CTTCAGCTGAGGAGCTGCTCACACACCACTTTGCAC...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGAAGCAGCAACTTCACTaGGCCCAGCAGCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RRWLGCHSMVHSLAWEKQKQQLH*AQQQPP
Trigger: AGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTT...CTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCACGACTCAGGCAGCCTaGGACACCTCCTCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCTTQAA*DTSSGS
Trigger: AGAGCCCGAGGAGGTGTCTCAGGCTGCCTGAGTCGT...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCTGGGGGCTCCCAACGACTCAGGCAGCCTaGGACACCTCCTCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: HAELRTLELLDLTGWGLPTTQAA*DTSSGS
Trigger: AGAGCCCGAGGAGGTGTCTCAGGCTGCCTGAGTCGT...TGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CCCCTACCCCTCCACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCACGACTCAGGCAGCCTaGGACACCTCCTCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLPLHAELRTLELLDLTGTTQAA*DTSSGS
Trigger: AGAGCCCGAGGAGGTGTCTCAGGCTGCCTGAGTCGT...GCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTGGAGGGGTAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTAGCTCTGTAAGACCCTaGACCTGGGACGCACAGTTG +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRSSVRP*TWDAQL
Trigger: CAACTGTGCGTCCCAGGTTCAGGGTCTTACAGAGCT...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR GCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTCGCCTCTCCCCGTTGTaGTCGAACTTGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRRLSPL*SNLILT
Trigger: CGTCAGAATCAAGTTCGAGCACAACGGGGAGAGGCG...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGTGTGCCAGTGACGGAGCGCATGCCCGTCCCCGACATACAGATCGTCTGCAGGCCCTGCCGGGCAATGTaGTGCTGCCGCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: GVPVTERMPVPDIQIVCRPCRAM*CCRSGT
Trigger: TGTTCCTGAGCGGCAGCAGCACATTGCCCGGCAGGG...CCTGCAGACGATCTGTATGTCGGGGACGGGCATGCGCTCCGTCACTGGCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGGATCCAGCATGCACTaGTCGCTGGTCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRGSSMH*SLVSGM
Trigger: CATCCCAGAGACCAGCGAGCAGTGCATGCTGGATCC...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGGATCCAGCATGCACTaGTCGCTGGTCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: GTDRRWLGCHSMVHSLAWGSSMH*SLVSGM
Trigger: CATCCCAGAGACCAGCGAGCAGTGCATGCTGGATCC...CCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCTCCTGGATCTGACAGGCTGGGGGCTCCCAGTCCTGAGGCTGCAGCCACCCCACGGGGGTCCAGGTATTaGACAGCCAGACCCATGTTC +
Preference number: 4 (lower is better)
Translates to: APGSDRLGAPSPEAAATPRGSRY*TARPMF
Trigger: GAACATGGGTCTGGCTGTGCAATACCTGGACCCCCG...TGGGGTGGCTGCAGCCTCAGGACTGGGAGCCCCCAGCCTGTCAGATCCAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCGGCACATTCCTCTCCTaGACAGAGAGGGCATTCTCG +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGGTFLS*TERAFS
Trigger: CGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCC...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGGGCACATTCCTCTCCTaGACAGAGAGGGCATTCTCG +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREGTFLS*TERAFS
Trigger: CGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCC...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGAGCACTCACCTCCTTaGTTGTCTCAGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: AQQQPPAMQQRATGSCVAEHSPP*LSQDCL
Trigger: CAGACAGTCCTGAGACAAGCAAGGAGGTGAGTGCTC...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGTGTGCAGGTAGGACATaGCCTCCAGGATCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: EGAQTDAGWAATPWSTALCAGRT*PPGSAA
Trigger: CGCGGCAGATCCTGGAGGGCATGTCCTACCTGCACA...CAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGCAGGCTCCACACGTCTaGTTTCCTTCCATAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREQAPHV*FPSIAL
Trigger: GAGGGCTATGGAAGGAAAGCAGACGTGTGGAGCCTG...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCATCTCCACCACAGTaGAGCCCAGGCTCCACACGT +
Preference number: 4 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLASPPQ*SPGSTR
Trigger: ACGTGTGGAGCCTGGGCTGCACTGTGGTGGAGATGC...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGGGCTTCGGTGCCAATTaGAGTGTCAGGACACATCCC +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVGFGAN*SVRTHP
Trigger: GGGATGTGTCCTGACACTGCAATTGGCACCGAAGCC...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGACATCCAGCCCAGAGATaGCCTGGTGGTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRHPAQR*PGGLQT
Trigger: TGTCTGGAGACCACCAGGGCATCTCTGGGCTGGATG...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCGATGGCGGCGGCGGTaGCTAAGGTCCGTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GPQPCLGEAATSLSPAAARWRRR*LRSVSV
Trigger: GACACTCACGGACCTTAGCCACCGCCGCCGCCATCG...GGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CTTCTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATGCGCTCATGCTGCGTCCATGGTGGCGATaGCGGCGGCGGTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: LLSAVPQTAIVLHDALMLRPWWR*RRRWLR
Trigger: CCTTAGCCACCGCCGCCGCCATCGCCACCATGGACG...CAGCATGAGCGCATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp CATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGGCTTCGGTGCCAATTCCTCCTGTTCGTCCATaGTGGCGATGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: HTLASVLCPQTLWASVPIPPVRP*WRWRRR
Trigger: CCGCCGCCGCCATCGCCACCATGGACGAACAGGAGG...AATTGGCACCGAAGCCCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGCTGGACACCCCAGAGTaGGGAGAGGAACTGTTATGG +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGRELDTPE*GEELLW
Trigger: CCATAACAGTTCCTCTCCCCACTCTGGGGTGTCCAG...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTCTGGACACCCCAGAGTaGGGAGAGGAACTGTTATGG +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRLDTPE*GEELLW
Trigger: CCATAACAGTTCCTCTCCCCACTCTGGGGTGTCCAG...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCGGGCACTGGGAGACTTaGTTGGCACATTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGGHWET*LAHSSP
Trigger: AGGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCC...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGGGGCACTGGGAGACTTaGTTGGCACATTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREGHWET*LAHSSP
Trigger: AGGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCC...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCGGGCACTGGGAGACTTaGTTGGCACATTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: AEGAQTDAGWAATPWSTAGHWET*LAHSSP
Trigger: AGGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCC...GGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGTCTGCAGGCGTTTGCTaGCCCCAAAGTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RRWLGCHSMVHSLAWEKQSAGVC*PQSPPA
Trigger: AGCTGGGGGACTTTGGGGCCAGCAAACGCCTGCAGA...CTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp ACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGTCTGCAGGCGTTTGCTaGCCCCAAAGTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TDRRWLGCHSMVHSLAWESAGVC*PQSPPA
Trigger: AGCTGGGGGACTTTGGGGCCAGCAAACGCCTGCAGA...CTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCGTCCACAGCCTTGCCTaGGAGAAGCAGCAACTTCAC +
Preference number: 4 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSVHSLA*EKQQLH
Trigger: GTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGAC...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGATGCCCCCAGACCCTCTaGGCTTCGGTGCCAATTGCA +
Preference number: 4 (lower is better)
Translates to: HRPTLAGLPLHGPQPCLGCPQTL*ASVPIA
Trigger: TGCAATTGGCACCGAAGCCCAGAGGGTCTGGGGGCA...TCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCAGCCCAGAGATGCCCTaGTGGTCTCCAGACATTGGA +
Preference number: 4 (lower is better)
Translates to: AEGAQTDAGWAATPWSTASPEMP*WSPDIG
Trigger: TCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCT...GGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCGGAGAGGCAGGGTCATaGCCACAGGCAGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCGEAGS*PQAGQA
Trigger: AGCCTGTCCTGCCTGTGGCCATGACCCTGCCTCTCC...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCATCGCGGGCCCCTGCCTaGGAGAGGCAGGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: PLHGPQPCLGEAATSLSPSRAPA*ERQGHG
Trigger: GCCATGACCCTGCCTCTCCCAGGCAGGGGCCCGCGA...TGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAAGTGGGGAACAAAGGCTaGGCCAGGAGCGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQVGNKG*ARSAKA
Trigger: GGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCAC...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTCAGAGCTGGCGGTTTTaGACACAGCTGGTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRQSWRF*TQLVVA
Trigger: TGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTG...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGAGACCTCAAGGGGATaGGCGAGGCTGGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLETSRG*ARLAEE
Trigger: TTCCTCAGCCAGCCTCGCCCATCCCCTTGAGGTCTC...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGGGTCCAGGCCCAACTaGCGCATGCGACACACACTT +
Preference number: 4 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLGSRPN*RMRHTL
Trigger: AAGTGTGTGTCGCATGCGCCAGTTGGGCCTGGACCC...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp GGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGCCCTTCAGAACCTTTaGGCCCAGGTCACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GTDRRWLGCHSMVHSLAWALQNL*AQVTLK
Trigger: CTTCAGGGTGACCTGGGCCCAAAGGTTCTGAAGGGC...CCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
3UTR CAA 72 bp GACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTaGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: DAGWAATPWSTA*PGRSSNFTEPS
Trigger: GCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
3UTR CAA 72 bp GTCCGCACTCCGCAGGCGCCCACGGGGGTCCAGGTATaGCACAGCCAGACCCATGTTCTCGCCATTTGTGCT +
Preference number: 4 (lower is better)
Translates to: VRTPQAPTGVQV*HSQTHVLAICA
Trigger: AGCACAAATGGCGAGAACATGGGTCTGGCTGTGCAATACCTGGACCCCCGTGGGCGCCTGCGGAGTGCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp ACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGTATCCAGGCATCCGGTaGCGTCGGTTCATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TDRRWLGCHSMVHSLAWEYPGIR*RRFIWR
Trigger: CCTCCAGATGAACCGACGTCACCGGATGCCTGGATA...CTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACGGACTGGGAAGCCTTaGTCCGCACCTGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQRTGKP*SAPVWT
Trigger: TGTCCAGACAGGTGCGGATCAAGGCTTCCCAGTCCG...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp ACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGACTCCCCCTCACTGTTaGTGCTGGTGTAGGACCCCT +
Preference number: 4 (lower is better)
Translates to: TDRRWLGCHSMVHSLAWETPPHC*CWCRTP
Trigger: AGGGGTCCTACACCAGCATCAACAGTGAGGGGGAGT...CTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCTTCGGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCACTCCCCCTCACTGTTaGTGCTGGTGTAGGACCCCT +
Preference number: 4 (lower is better)
Translates to: ASVPIAVSGHIPEGGAHGTPPHC*CWCRTP
Trigger: AGGGGTCCTACACCAGCATCAACAGTGAGGGGGAGT...GCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACCGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp TGGCCAGGCCAGATGCCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGCACGGGACATTCGTaGTTTCCGGAAGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: WPGQMPRPCRPSPLLLQWGTGHS*FPEGWA
Trigger: AGCCCATCCTTCCGGAAATCACGAATGTCCCGTGCC...CCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGGCATCTGGCCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp AGGCGCCCACGGGGGTCCAGGTATTGCACAGCCAGACCCATGTTCTCGCCATTTTTCCCCGGCGCCAGTTaGTGGGGGCACTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: RRPRGSRYCTARPMFSPFFPGAS*WGHWET
Trigger: AGTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAA...AAATGGCGAGAACATGGGTCTGGCTGTGCAATACCTGGACCCCCGTGGGCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp CCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTCAGCTCTAGTAGGGTGTGCCAGTaGCGGAGCGCATGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: PVGNKGWARSAKATTFSSSRVCQ*RSACPS
Trigger: GGACGGGCATGCGCTCCGTCACTGGCACACCCTACT...AGAGCTGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CTTCTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATGCGCTCATGCTGAGTAGGGTGTGCCAGTaGCGGAGCGCATGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LLSAVPQTAIVLHDALMLSRVCQ*RSACPS
Trigger: GGACGGGCATGCGCTCCGTCACTGGCACACCCTACT...CAGCATGAGCGCATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR TCA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGTAGGGTGTGCCAGTaGCGGAGCGCATGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPSRVCQ*RSACPS
Trigger: GGACGGGCATGCGCTCCGTCACTGGCACACCCTACT...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCGAGCAGCTCCTCAGCTaGAGGTCTCTGGCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLEQLLS*RSLASL
Trigger: GAGGCTCGCCAGAGACCTTCAGCTGAGGAGCTGCTC...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATGAGCAGCTCCTCAGCTaGAGGTCTCTGGCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHEQLLS*RSLASL
Trigger: GAGGCTCGCCAGAGACCTTCAGCTGAGGAGCTGCTC...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCTCCTGGATCTGACAGGCTGGGGGCTCCCAGTCCTGAGGCTGCAGCCACCCCAGTGCAAAGTGGTGTGTaGGCAGCTCCTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: APGSDRLGAPSPEAAATPVQSGV*AAPQLK
Trigger: CTTCAGCTGAGGAGCTGCTCACACACCACTTTGCAC...TGGGGTGGCTGCAGCCTCAGGACTGGGAGCCCCCAGCCTGTCAGATCCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGTGCAAAGTGGTGTGTaGGCAGCTCCTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRVQSGV*AAPQLK
Trigger: CTTCAGCTGAGGAGCTGCTCACACACCACTTTGCAC...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCAAAGCAGCAACTTCACTaGGCCCAGCAGCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPKQQLH*AQQQPP
Trigger: AGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTT...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGATGGGCGAGGCTGGCTaGGGAAGAACAGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLMGEAG*GRTELA
Trigger: CGCCAGCTCTGTTCTTCCTCAGCCAGCCTCGCCCAT...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATATGGGCGAGGCTGGCTaGGGAAGAACAGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHMGEAG*GRTELA
Trigger: CGCCAGCTCTGTTCTTCCTCAGCCAGCCTCGCCCAT...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp TGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCTGCCTTGACAAGGGAAAGGGGCTaGGACCTCAAGGGGATGGGC +
Preference number: 4 (lower is better)
Translates to: CQLQCQDTSPRVGPTAALTRERG*DLKGMG
Trigger: GCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGT...CAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGGACCAGCGCCCAGGCTaGGGTAAATATGGCCAACTC +
Preference number: 4 (lower is better)
Translates to: EGAQTDAGWAATPWSTALDQRPG*GKYGQL
Trigger: GAGTTGGCCATATTTACCTCAGCCTGGGCGCTGGTC...CAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCAGCTTTGGTCAAGATaGGGGCCAGGCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQEQLWSR*GPGPTL
Trigger: CAGGGTGGGGCCTGGCCCTCATCTTGACCAAAGCTG...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCCCTGGGACGCACAGTTaGGTCAGCCAGCACCGTGCT +
Preference number: 4 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLPGTHS*VSQHRA
Trigger: AGCACGGTGCTGGCTGACTCAACTGTGCGTCCCAGG...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp AGGAGCTACAAGGGAAAGGGGCTGAGACCTCAAGGGGATGGGCGAGGCTGGCTGCCTGGGACGCACAGTTaGGTCAGCCAGCACCGTGCT +
Preference number: 4 (lower is better)
Translates to: RSYKGKGLRPQGDGRGWLPGTHS*VSQHRA
Trigger: AGCACGGTGCTGGCTGACTCAACTGTGCGTCCCAGG...CAGCCAGCCTCGCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGTAGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp TGGCCAGGCCAGATGCCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAATGATGAGAAAGTaGCGGCACGGCCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: WPGQMPRPCRPSPLLLQWGMMRK*RHGPFP
Trigger: TGGGAAGGGGCCGTGCCGTCACTTTCTCATCATTCC...CCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGGCATCTGGCCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp GGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGACTGGCCCCTGCACATaGGCTTGTTGTTACTGTGGG +
Preference number: 4 (lower is better)
Translates to: GTDRRWLGCHSMVHSLAWTGPCT*ACCYCG
Trigger: CCCACAGTAACAACAAGCTCATGTGCAGGGGCCAGT...CCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGACGCCTCTCCCCGTTGTaGTCGAACTTGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRRLSPL*SNLILT
Trigger: CGTCAGAATCAAGTTCGAGCACAACGGGGAGAGGCG...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp AGGAGCTACAAGGGAAAGGGGCTGAGACCTCAAGGGGATGGGCGAGGCTGGCTGCCCTGCCGGGCAATGTaGTGCTGCCGCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: RSYKGKGLRPQGDGRGWLPCRAM*CCRSGT
Trigger: TGTTCCTGAGCGGCAGCAGCACATTGCCCGGCAGGG...CAGCCAGCCTCGCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGTAGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTTGTTCTCGCCATTTGTaGTCAGGGAGCGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLCSRHL*SGSGWR
Trigger: CCTCCAGCCGCTCCCTGAGCACAAATGGCGAGAACA...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCGGGGGTCCAGGTATTaGACAGCCAGACCCATGTTC +
Preference number: 4 (lower is better)
Translates to: RRWLGCHSMVHSLAWEKQRGSRY*TARPMF
Trigger: GAACATGGGTCTGGCTGTGCAATACCTGGACCCCCG...CTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCTTCGGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCAGCACAAATAGACCCTaGCGAAGGCACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ASVPIAVSGHIPEGGAHGSTNRP*RRHPGP
Trigger: TGGGCCAGGGTGCCTTCGGCAGGGTCTATTTGTGCT...GCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACCGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATGTGCAGGTAGGACATaGCCTCCAGGATCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPCAGRT*PPGSAA
Trigger: CGCGGCAGATCCTGGAGGGCATGTCCTACCTGCACA...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATCGTCTGCAGGCGTTTaGTGGCCCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPSSAGV*WPQSPP
Trigger: TGGGGGACTTTGGGGCCAGCAAACGCCTGCAGACGA...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCGCATCTCCACCACAGTaGAGCCCAGGCTCCACACGT +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCASPPQ*SPGSTR
Trigger: ACGTGTGGAGCCTGGGCTGCACTGTGGTGGAGATGC...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCTTCGGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCGAGCCTCCACAAAAATaGGCCTCAGGAAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: ASVPIAVSGHIPEGGAHGEPPQK*ASGSPG
Trigger: GCCGGGACTTCCTGAGGCGCATTTTTGTGGAGGCTC...GCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACCGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTCAGCTCTAGCAGCCCCCTGCCATaGAGCAAAGGGCGACCGGCA +
Preference number: 4 (lower is better)
Translates to: PVGNKGWARSAKATTFSSSSPLP*SKGRPA
Trigger: TGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCT...AGAGCTGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp TGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCAGCAGCCCCCTGCCATaGAGCAAAGGGCGACCGGCA +
Preference number: 4 (lower is better)
Translates to: WSTALPGRSSNFTEPSSSSSPLP*SKGRPA
Trigger: TGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCT...GCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAAGCCACTGCTAGCGAGTaGTGGCCTTTCCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQATASE*WPFPQA
Trigger: AGCCTGAGGGAAAGGCCAGCACTCGCTAGCAGTGGC...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GAGCGCAAAGGCCACAACCTTCAGCTCTTTTCAATGCAGCCTAGGCCCAAGCCCGTGGCATCGGCAGGGTaGCCCGCTACATCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: ERKGHNLQLFSMQPRPKPVASAG*PATSRA
Trigger: CGCCCGGGATGTAGCGGGCCACCCTGCCGATGCCAC...GGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAAGGTTGTGGCCTTTGCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGACTGGACACCCCAGAGTaGGGAGAGGAACTGTTATGG +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRLDTPE*GEELLW
Trigger: CCATAACAGTTCCTCTCCCCACTCTGGGGTGTCCAG...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCTGGGGGCTCCCACTTCGGCCAGGGTTCTaGGAGCTGACAGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HAELRTLELLDLTGWGLPLRPGF*ELTERC
Trigger: GCACCTCTCTGTCAGCTCCCAGAACCCTGGCCGAAG...TGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGTTGTCAGGGAAGCTCTaGGCACGGGACATTCGTGAT +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVLSGKL*ARDIRD
Trigger: ATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAA...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTTTGTCAGGGAAGCTCTaGGCACGGGACATTCGTGAT +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRLSGKL*ARDIRD
Trigger: ATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAA...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCGGCACAGACCGACGCTaGCTGGGCTGCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPGTDRR*LGCHSM
Trigger: CATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAATGCCCCCAGACCCTCTaGGCTTCGGTGCCAATTGCA +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQCPQTL*ASVPIA
Trigger: TGCAATTGGCACCGAAGCCCAGAGGGTCTGGGGGCA...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAACTCCCAAGGAAACTaGGTGTTGAGAGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVNSQGN*VLRGRS
Trigger: GCTCCTCCCTCTCAACACCCAGTTTCCTTGGGAGTT...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGAACTCCCAAGGAAACTaGGTGTTGAGAGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWNSQGN*VLRGRS
Trigger: GCTCCTCCCTCTCAACACCCAGTTTCCTTGGGAGTT...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp TGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCTGCCTTGGGGTCCAGGCCCAACTaGCGCATGCGACACACACTT +
Preference number: 4 (lower is better)
Translates to: CQLQCQDTSPRVGPTAALGSRPN*RMRHTL
Trigger: AAGTGTGTGTCGCATGCGCCAGTTGGGCCTGGACCC...CAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCGTGCAGCCACCAAGATaGGGTCGTAGAGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCVQPPR*GRREAE
Trigger: CTCGGCCTCTCTACGACCCCATCTTGGTGGCTGCAC...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCCCACCAGATCGTTCATaGTTGAGTTCAATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AQQQPPAMQQRATGSCVAPPDRS*LSSMPP
Trigger: AGGAGGCATTGAACTCAATCATGAACGATCTGGTGG...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATATCCAGGCATCCGGTaGCGTCGGTTCATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPYPGIR*RRFIWR
Trigger: CCTCCAGATGAACCGACGTCACCGGATGCCTGGATA...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CAGGCGCCCACGGGGGTCCAGGTATTGCACAGCCAGACCCATGTTCTCGCCATTCGGACTGGGAAGCCTTaGTCCGCACCTGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: QAPTGVQVLHSQTHVLAIRTGKP*SAPVWT
Trigger: TGTCCAGACAGGTGCGGATCAAGGCTTCCCAGTCCG...AATGGCGAGAACATGGGTCTGGCTGTGCAATACCTGGACCCCCGTGGGCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp GGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCGGACTGGGAAGCCTTaGTCCGCACCTGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: GPQPCLGEAATSLSPAAARTGKP*SAPVWT
Trigger: TGTCCAGACAGGTGCGGATCAAGGCTTCCCAGTCCG...GGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACGGATGGGCTGTCTGCTaGCCTGTCCAAGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: AGWAATPWSTALPGRSSNGWAVC*PVQGLA
Trigger: TGCCAATCCTTGGACAGGTCAGCAGACAGCCCATCC...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGGTAGGTTCCACCTTTaGCCCCTTTGTCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: AQQQPPAMQQRATGSCVAGRFHL*PLCHKA
Trigger: AGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACC...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCCTGGCATGTACTCCATaGAGATGGTCAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: AEGAQTDAGWAATPWSTALACTP*RWSGSS
Trigger: AGAAGACCCTGACCATCTTCATGGAGTACATGCCAG...GGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGCTGGCATGTACTCCATaGAGATGGTCAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVLACTP*RWSGSS
Trigger: AGAAGACCCTGACCATCTTCATGGAGTACATGCCAG...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCCTTAATGTCCCGGTaGACAATCATGTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWPLMSR*TIMLLC
Trigger: GCACAGCAACATGATTGTTCACCGGGACATTAAGGG...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTCCCTTAATGTCCCGGTaGACAATCATGTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRPLMSR*TIMLLC
Trigger: GCACAGCAACATGATTGTTCACCGGGACATTAAGGG...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CGCTCTCTGTCAGAGCACCGTAAGCCTTCAACTGGTCTTTCACCGAGCCCCCTGAGTAGGGTGTGCCAGTaGCGGAGCGCATGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: RSLSEHRKPSTGLSPSPLSRVCQ*RSACPS
Trigger: GGACGGGCATGCGCTCCGTCACTGGCACACCCTACT...CAGGGGGCTCGGTGAAAGACCAGTTGAAGGCTTACGGTGCTCTGACAGAGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR TCA 90 bp TCAATGCAGCCTAGGCCCAAGCCCAAAGCAGGGGTACTCAGAGCCCAGAGGGCACATAGCCCTCGCCGCTaGTCACCTCAGGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: SMQPRPKPKAGVLRAQRAHSPRR*SPQGSS
Trigger: GGATGAGCCCTGAGGTGATCAGCGGCGAGGGCTATG...TGCCCTCTGGGCTCTGAGTACCCCTGCTTTGGGCTTGGGCCTAGGCTGCATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTCAGCTCTCATAGCCCTCGCCGCTaGTCACCTCAGGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: PVGNKGWARSAKATTFSSHSPRR*SPQGSS
Trigger: GGATGAGCCCTGAGGTGATCAGCGGCGAGGGCTATG...AGAGCTGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp TGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCCTAAGCAGCAACTTCACTaGGCCCAGCAGCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: WSGLWPSRSRLRQPETPPKQQLH*AQQQPP
Trigger: AGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTT...AGGAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCAAGCAGCAACTTCACTaGGCCCAGCAGCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PSAPVGNKGWARSAKATTKQQLH*AQQQPP
Trigger: AGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTT...GGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp TGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCCTACAAGGGAAAGGGGCTaGGACCTCAAGGGGATGGGC +
Preference number: 4 (lower is better)
Translates to: WSGLWPSRSRLRQPETPPTRERG*DLKGMG
Trigger: GCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGT...AGGAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGCTGTTCAGAAGGGCTaGGCTGCTGCTGTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: GTDRRWLGCHSMVHSLAWAVQKG*AAAVVF
Trigger: AAACACAACAGCAGCAGCTCAGCCCTTCTGAACAGC...CCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCGGATCCAGCATGCACTaGTCGCTGGTCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCGSSMH*SLVSGM
Trigger: CATCCCAGAGACCAGCGAGCAGTGCATGCTGGATCC...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGGAATTTTCTGCACTaGTCAGGGGATCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVRNFLH*SGDPAC
Trigger: GCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCT...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCAGGAATTTTCTGCACTaGTCAGGGGATCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: AAPCHAAKGDRQLCGRESRNFLH*SGDPAC
Trigger: GCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCT...GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp TGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCTGCCTTGCGGGGGTCCAGGTATTaGACAGCCAGACCCATGTTC +
Preference number: 4 (lower is better)
Translates to: CQLQCQDTSPRVGPTAALRGSRY*TARPMF
Trigger: GAACATGGGTCTGGCTGTGCAATACCTGGACCCCCG...CAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp TGTAGGACCCCTGCCGGGCAATGTGCTGCTGCCGCTCAGGAACATAGCCAGGGGAGCACAAATAGACCCTaGCGAAGGCACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: CRTPAGQCAAAAQEHSQGSTNRP*RRHPGP
Trigger: TGGGCCAGGGTGCCTTCGGCAGGGTCTATTTGTGCT...CCCCTGGCTATGTTCCTGAGCGGCAGCAGCACATTGCCCGGCAGGGGTCCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAAAGCACAAATAGACCCTaGCGAAGGCACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQSTNRP*RRHPGP
Trigger: TGGGCCAGGGTGCCTTCGGCAGGGTCTATTTGTGCT...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGCACGATGCGCTCATaGTGCAAGTTCTTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPCTMRS*CKFFSN
Trigger: GTTGCTAAAGAACTTGCAGCATGAGCGCATCGTGCA...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCATGCCCTCCAGGATCTaGCGCGTGTACTTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCMPSRI*RVYFRV
Trigger: GACCCGAAAGTACACGCGGCAGATCCTGGAGGGCAT...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp ACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAATGCCCTCCAGGATCTaGCGCGTGTACTTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: TLAGLPLHGPQPCLGEAAMPSRI*RVYFRV
Trigger: GACCCGAAAGTACACGCGGCAGATCCTGGAGGGCAT...TGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTGTGCAGGTAGGACATaGCCTCCAGGATCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: PSAPVGNKGWARSAKATTCAGRT*PPGSAA
Trigger: CGCGGCAGATCCTGGAGGGCATGTCCTACCTGCACA...GGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATTGTGCAGGTAGGACATaGCCTCCAGGATCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHCAGRT*PPGSAA
Trigger: CGCGGCAGATCCTGGAGGGCATGTCCTACCTGCACA...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGGGTGAACAATCATGTTaGTGTGCAGGTAGGACATGC +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPGEQSC*CAGRTC
Trigger: GCATGTCCTACCTGCACAGCAACATGATTGTTCACC...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCTCGTCTGCAGGCGTTTaGTGGCCCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GPQPCLGEAATSLSPAAASSAGV*WPQSPP
Trigger: TGGGGGACTTTGGGGCCAGCAAACGCCTGCAGACGA...GGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCGCATCTCCACCACAGTaGAGCCCAGGCTCCACACGT +
Preference number: 4 (lower is better)
Translates to: GPQPCLGEAATSLSPAAAASPPQ*SPGSTR
Trigger: ACGTGTGGAGCCTGGGCTGCACTGTGGTGGAGATGC...GGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCGAGCCTCCACAAAAATaGGCCTCAGGAAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCEPPQK*ASGSPG
Trigger: GCCGGGACTTCCTGAGGCGCATTTTTGTGGAGGCTC...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGGCCACTGCTAGCGAGTaGTGGCCTTTCCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQEATASE*WPFPQA
Trigger: AGCCTGAGGGAAAGGCCAGCACTCGCTAGCAGTGGC...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCTTCAGCTCTTTTCAATaGAGCCTAGGCCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: AAPCHAAKGDRQLCGRESFSSFQ*SLGPSP
Trigger: TGGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAA...GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCTTCAGCTCTTTTCAATaGAGCCTAGGCCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSFSSFQ*SLGPSP
Trigger: TGGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAA...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAAACACTGGCCTGGCTTTaGACTGCAAGCCCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQTLAWL*TASPRS
Trigger: TGACCGAGGGCTTGCAGTGCAAAGCCAGGCCAGTGT...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp ACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCACTGCTCGCTGGTCTCTaGGATGAACTCCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: TLAGLPLHGPQPCLGEAALLAGL*DELPLT
Trigger: AGTGAGGGGGAGTTCATCCCAGAGACCAGCGAGCAG...TGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCAAATTGGACCTGCTTaGAAGCAAGTTCACGTCCCG +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGQIGPA*KQVHVP
Trigger: CGGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTG...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCTTTCACCGAGCCCCCTaGCATGTACTCCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: AAPCHAAKGDRQLCGRESFHRAP*HVLHED
Trigger: ATCTTCATGGAGTACATGCCAGGGGGCTCGGTGAAA...GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CAGGGATGGACACAGGAGGGTCCAGGCCCAACTGGCGCATGCGACACACACTTCTCTGCAGGCGTTTGCTaGCCCCAAAGTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QGWTQEGPGPTGACDTHFSAGVC*PQSPPA
Trigger: AGCTGGGGGACTTTGGGGCCAGCAAACGCCTGCAGA...GAAGTGTGTGTCGCATGCGCCAGTTGGGCCTGGACCCTCCTGTGTCCATCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGTCAGCTGAAGGTCTCTaGCGAGCCTCCACAAAAATG +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGRESAEGL*RASTKM
Trigger: CATTTTTGTGGAGGCTCGCCAGAGACCTTCAGCTGA...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGTCAGCTGAAGGTCTCTaGCGAGCCTCCACAAAAATG +
Preference number: 4 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWSAEGL*RASTKM
Trigger: CATTTTTGTGGAGGCTCGCCAGAGACCTTCAGCTGA...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGGCTTCGGTGCCAATTCTGGATCTGACAGGCTaGGGGCTCCCAGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: HTLASVLCPQTLWASVPILDLTG*GLPVLR
Trigger: CCTCAGGACTGGGAGCCCCCAGCCTGTCAGATCCAG...AATTGGCACCGAAGCCCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTACACTCTTCATACCCTaGCGTCAGTCTTGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLTLFIP*RQSCAP
Trigger: GGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGT...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp AAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCCAGAGATGCCCTGGTaGTCTCCAGACATTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KGHRPTLAGLPLHGPQPCPEMPW*SPDIGR
Trigger: CCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGG...GCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp TGGCCAGGCCAGATGCCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGAGCCCAGAGATGCCCTaGTGGTCTCCAGACATTGGA +
Preference number: 4 (lower is better)
Translates to: WPGQMPRPCRPSPLLLQWSPEMP*WSPDIG
Trigger: TCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCT...CCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGGCATCTGGCCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGGTAAAGGACAGGACTaGCAGAGCCAACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLGKGQD*QSQPGT
Trigger: AGTCCCAGGTTGGCTCTGCCAGTCCTGTCCTTTACC...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp TGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCGGAGAGGCAGGGTCATaGCCACAGGCAGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: WSTALPGRSSNFTEPSSSGEAGS*PQAGQA
Trigger: AGCCTGTCCTGCCTGTGGCCATGACCCTGCCTCTCC...GCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCCCCTTCTGCTCCAGTaGGGAACAAAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQEPLLLQ*GTKAGP
Trigger: TGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGG...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCCCCCTTCTGCTCCAGTaGGGAACAAAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLPLLLQ*GTKAGP
Trigger: TGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGG...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCACCTCCTCGGGCTCTCTaGGATCAGGGCACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LHGPQPCLGEAATSLSPAPPRAL*DQGTGQ
Trigger: CTGGCCAGTGCCCTGATCCCAGAGAGCCCGAGGAGG...TGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCGCTGGTGGTAGCATATaGGCTTTCCCTTCTACCAGA +
Preference number: 4 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSAGGSI*AFPSTR
Trigger: TCTGGTAGAAGGGAAAGCCCATATGCTACCACCAGC...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGACAGAGCTGGCGGTTTTaGACACAGCTGGTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: HRPTLAGLPLHGPQPCLGQSWRF*TQLVVA
Trigger: TGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTG...TCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCGGGGATGGGCGAGGCTaGCTGAGGAAGAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLGDGRG*LRKNRA
Trigger: AGCTCTGTTCTTCCTCAGCCAGCCTCGCCCATCCCC...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGAAGGGGCAGGAGGGTaGCAGAGTGCGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: PLHGPQPCLGEAATSLSPEGAGG*QSADCP
Trigger: GGGACAGTCCGCACTCTGCCACCCTCCTGCCCCTTC...TGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp GCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCCCACCAGATCGTTCATaGTTGAGTTCAATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AEGAQTDAGWAATPWSTAPPDRS*LSSMPP
Trigger: AGGAGGCATTGAACTCAATCATGAACGATCTGGTGG...GGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp AGGAGCTACAAGGGAAAGGGGCTGAGACCTCAAGGGGATGGGCGAGGCTGGCTGTATCCAGGCATCCGGTaGCGTCGGTTCATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RSYKGKGLRPQGDGRGWLYPGIR*RRFIWR
Trigger: CCTCCAGATGAACCGACGTCACCGGATGCCTGGATA...CAGCCAGCCTCGCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGTAGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CGCTCTCTGTCAGAGCACCGTAAGCCTTCAACTGGTCTTTCACCGAGCCCCCTGATAGCCAGGGGGAGGTaGGCTTCGGCCAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RSLSEHRKPSTGLSPSPLIARGR*ASARVL
Trigger: CAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTAT...CAGGGGGCTCGGTGAAAGACCAGTTGAAGGCTTACGGTGCTCTGACAGAGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp CAGGGATGGACACAGGAGGGTCCAGGCCCAACTGGCGCATGCGACACACACTTCGGATGGGCTGTCTGCTaGCCTGTCCAAGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: QGWTQEGPGPTGACDTHFGWAVC*PVQGLA
Trigger: TGCCAATCCTTGGACAGGTCAGCAGACAGCCCATCC...GAAGTGTGTGTCGCATGCGCCAGTTGGGCCTGGACCCTCCTGTGTCCATCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp CCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCGGCACGGGACATTCGTaGTTTCCGGAAGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: PSAPVGNKGWARSAKATTGTGHS*FPEGWA
Trigger: AGCCCATCCTTCCGGAAATCACGAATGTCCCGTGCC...GGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGGGTAGGTTCCACCTTTaGCCCCTTTGTCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREGRFHL*PLCHKA
Trigger: AGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACC...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCTGGAGGGCACCAGGGTaGACAAGTTGCCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCWRAPG*TSCLDD
Trigger: GTCATCAAGGCAACTTGTTCACCCTGGTGCCCTCCA...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp TGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCTGCCTTGTGGAGGGCACCAGGGTaGACAAGTTGCCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: CQLQCQDTSPRVGPTAALWRAPG*TSCLDD
Trigger: GTCATCAAGGCAACTTGTTCACCCTGGTGCCCTCCA...CAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GTGGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACACCCTTAATGTCCCGGTaGACAATCATGTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: VAEGAQTDAGWAATPWSTPLMSR*TIMLLC
Trigger: GCACAGCAACATGATTGTTCACCGGGACATTAAGGG...TGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp TGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTCATAGCCCTCGCCGCTaGTCACCTCAGGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: WAATPWSTALPGRSSNFTHSPRR*SPQGSS
Trigger: GGATGAGCCCTGAGGTGATCAGCGGCGAGGGCTATG...AGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GAGCGCAAAGGCCACAACCTTCAGCTCTTTTCAATGCAGCCTAGGCCCAAGCCCTGGAGCTCCTGGATCTaGCAGGCTGGGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ERKGHNLQLFSMQPRPKPWSSWI*QAGGSQ
Trigger: CTGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCA...GGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAAGGTTGTGGCCTTTGCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATGACCAGCGCCCAGGCTaGGGTAAATATGGCCAACTC +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHDQRPG*GKYGQL
Trigger: GAGTTGGCCATATTTACCTCAGCCTGGGCGCTGGTC...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCACTGGCCCCTGCACATaGGCTTGTTGTTACTGTGGG +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCTGPCT*ACCYCG
Trigger: CCCACAGTAACAACAAGCTCATGTGCAGGGGCCAGT...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCGCCTCTCCCCGTTGTaGTCGAACTTGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCRLSPL*SNLILT
Trigger: CGTCAGAATCAAGTTCGAGCACAACGGGGAGAGGCG...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGGGATCCAGCATGCACTaGTCGCTGGTCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQEGSSMH*SLVSGM
Trigger: CATCCCAGAGACCAGCGAGCAGTGCATGCTGGATCC...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAAGGAATTTTCTGCACTaGTCAGGGGATCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRRNFLH*SGDPAC
Trigger: GCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCT...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAAGGCACATTCCTCTCCTaGACAGAGAGGGCATTCTCG +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQGTFLS*TERAFS
Trigger: CGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCC...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCAGCACAAATAGACCCTaGCGAAGGCACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLSTNRP*RRHPGP
Trigger: TGGGCCAGGGTGCCTTCGGCAGGGTCTATTTGTGCT...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGGGATCAAATTGGACCTaGTTGGAAGCAAGTTCACGT +
Preference number: 4 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPGSNWT*LEASSR
Trigger: ACGTGAACTTGCTTCCAAGCAGGTCCAATTTGATCC...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTACGATGCGCTCATGCTaGAAGTTCTTTAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRTMRSC*KFFSNW
Trigger: CCAGTTGCTAAAGAACTTGCAGCATGAGCGCATCGT...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGCATAGTACTGCACGATaGGCTCATGCTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVHSTAR*AHAASS
Trigger: AGAACTTGCAGCATGAGCGCATCGTGCAGTACTATG...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCATGCCCTCCAGGATCTaGCGCGTGTACTTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: PSAPVGNKGWARSAKATTMPSRI*RVYFRV
Trigger: GACCCGAAAGTACACGCGGCAGATCCTGGAGGGCAT...GGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CAATGTGCTGCTGCCGCTCAGGAACATAGCCAGGGGGAGGTGAGCTTCGGCCAGATGCCCTCCAGGATCTaGCGCGTGTACTTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: QCAAAAQEHSQGEVSFGQMPSRI*RVYFRV
Trigger: GACCCGAAAGTACACGCGGCAGATCCTGGAGGGCAT...CTGGCCGAAGCTCACCTCCCCCTGGCTATGTTCCTGAGCGGCAGCAGCACATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp CCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCTGTGCAGGTAGGACATaGCCTCCAGGATCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: PWSTALPGRSSNFTEPSSCAGRT*PPGSAA
Trigger: CGCGGCAGATCCTGGAGGGCATGTCCTACCTGCACA...GCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGGGTGAACAATCATGTTaGTGTGCAGGTAGGACATGC +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREGEQSC*CAGRTC
Trigger: GCATGTCCTACCTGCACAGCAACATGATTGTTCACC...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTCATAGCTTCATACTCTaGCCACGGTGGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRHSFIL*PRWFLC
Trigger: ACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATG...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGACACATCCCCGAGGGTGGGGCCCACGGCTGCCTTGCACACTGTTCCCAGCCCTCAGTACATGAGCTGTaGAAAGTGGTGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GHIPEGGAHGCLAHCSQPSVHEL*KVVCEQ
Trigger: CTGCTCACACACCACTTTGCACAGCTCATGTACTGA...GGGCTGGGAACAGTGTGCAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCTCAGTACATGAGCTGTaGAAAGTGGTGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGSVHEL*KVVCEQ
Trigger: CTGCTCACACACCACTTTGCACAGCTCATGTACTGA...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCAAAGTCCCCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCAGCAGCCCCCTGCCATaGAGCAAAGGGCGACCGGCA +
Preference number: 4 (lower is better)
Translates to: PKSPSFTFPAESRRMLAPSSPLP*SKGRPA
Trigger: TGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCT...GGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGGGGACTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp CCCCTACCCCTCCACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCGGCTTCGGTGCCAATTaGAGTGTCAGGACACATCCC +
Preference number: 4 (lower is better)
Translates to: PLPLHAELRTLELLDLTGGFGAN*SVRTHP
Trigger: GGGATGTGTCCTGACACTGCAATTGGCACCGAAGCC...GCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTGGAGGGGTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CCCCTACCCCTCCACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCGGCCCAACTGGCGCATaGGACACACACTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PLPLHAELRTLELLDLTGGPTGA*DTHFCK
Trigger: TTTGCAGAAGTGTGTGTCGCATGCGCCAGTTGGGCC...GCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTGGAGGGGTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR GCA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGGTAGAGAGGCCGAGCTaGCACACAGCAGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLVERPS*HTAALV
Trigger: GACCAAAGCTGCTGTGTGGCAGCTCGGCCTCTCTAC...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR GCA 90 bp TGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCCTGTAGAGAGGCCGAGCTaGCACACAGCAGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: WSGLWPSRSRLRQPETPPVERPS*HTAALV
Trigger: GACCAAAGCTGCTGTGTGGCAGCTCGGCCTCTCTAC...AGGAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp CCCCTACCCCTCCACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCCTGGACACCCCAGAGTaGGGAGAGGAACTGTTATGG +
Preference number: 4 (lower is better)
Translates to: PLPLHAELRTLELLDLTGLDTPE*GEELLW
Trigger: CCATAACAGTTCCTCTCCCCACTCTGGGGTGTCCAG...GCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTGGAGGGGTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp TCAATGCAGCCTAGGCCCAAGCCCAAAGCAGGGGTACTCAGAGCCCAGAGGGCACTTCGGCCAGGGTTCTaGGAGCTGACAGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SMQPRPKPKAGVLRAQRALRPGF*ELTERC
Trigger: GCACCTCTCTGTCAGCTCCCAGAACCCTGGCCGAAG...TGCCCTCTGGGCTCTGAGTACCCCTGCTTTGGGCTTGGGCCTAGGCTGCATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CAGGGATGGACACAGGAGGGTCCAGGCCCAACTGGCGCATGCGACACACACTTCCTGCTCGCTGGTCTCTaGGATGAACTCCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: QGWTQEGPGPTGACDTHFLLAGL*DELPLT
Trigger: AGTGAGGGGGAGTTCATCCCAGAGACCAGCGAGCAG...GAAGTGTGTGTCGCATGCGCCAGTTGGGCCTGGACCCTCCTGTGTCCATCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp CGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCACTGCTCGCTGGTCTCTaGGATGAACTCCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: RPCRPSPLLLQWGTKAGPLLAGL*DELPLT
Trigger: AGTGAGGGGGAGTTCATCCCAGAGACCAGCGAGCAG...TGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GAGAGGGCATTCTCGCTGTCCGCACTCCGCAGGCGCCCACGGGGGTCCAGGTATGACCTGTCCAAGGATTaGCAGCTTCCAGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: ERAFSLSALRRRPRGSRYDLSKD*QLPDKE
Trigger: TTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGGTC...ATACCTGGACCCCCGTGGGCGCCTGCGGAGTGCGGACAGCGAGAATGCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp ACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGTTGTCAGGGAAGCTCTaGGCACGGGACATTCGTGAT +
Preference number: 4 (lower is better)
Translates to: TDRRWLGCHSMVHSLAWELSGKL*ARDIRD
Trigger: ATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAA...CTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACGGGCACTGGGAGACTTaGTTGGCACATTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: AGWAATPWSTALPGRSSNGHWET*LAHSSP
Trigger: AGGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCC...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAAGGGCACTGGGAGACTTaGTTGGCACATTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQGHWET*LAHSSP
Trigger: AGGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCC...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCTCAGTACATGAGCTGTGCATCTGCAGGCGTTTGCTaGCCCCAAAGTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QRATGSCVAVRAQYMSCASAGVC*PQSPPA
Trigger: AGCTGGGGGACTTTGGGGCCAGCAAACGCCTGCAGA...TGCACAGCTCATGTACTGAGCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCAGTCCACAGCCTTGCCTaGGAGAAGCAGCAACTTCAC +
Preference number: 4 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPVHSLA*EKQQLH
Trigger: GTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGAC...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACGTCCACAGCCTTGCCTaGGAGAAGCAGCAACTTCAC +
Preference number: 4 (lower is better)
Translates to: AGWAATPWSTALPGRSSNVHSLA*EKQQLH
Trigger: GTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGAC...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CCCCTACCCCTCCACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCCCAGAGATGCCCTGGTaGTCTCCAGACATTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PLPLHAELRTLELLDLTGPEMPW*SPDIGR
Trigger: CCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGG...GCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTGGAGGGGTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp TGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCTGCCTTGTTTCCCTCAGGCTTGTaGGAGCTCATCCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: CQLQCQDTSPRVGPTAALFPSGL*ELIQPR
Trigger: TCTGGGCTGGATGAGCTCCCACAAGCCTGAGGGAAA...CAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp ACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAGGTAAAGGACAGGACTaGCAGAGCCAACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: TLAGLPLHGPQPCLGEAAGKGQD*QSQPGT
Trigger: AGTCCCAGGTTGGCTCTGCCAGTCCTGTCCTTTACC...TGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAAGGTAAAGGACAGGACTaGCAGAGCCAACCTGGGACT +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQGKGQD*QSQPGT
Trigger: AGTCCCAGGTTGGCTCTGCCAGTCCTGTCCTTTACC...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCAGATGGAGTGGGCTCTaGCCTAGCAGGTCACGACTC +
Preference number: 4 (lower is better)
Translates to: GPQPCLGEAATSLSPAAARWSGL*PSRSRL
Trigger: GAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATCT...GGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCCCTTCTACCAGATaGAGTGGGCTCTGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: AGWAATPWSTALPGRSSNFPSTR*SGLWPS
Trigger: GCTAGGCCAGAGCCCACTCCATCTGGTAGAAGGGAA...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGCTGGTGGTAGCATATaGGCTTTCCCTTCTACCAGA +
Preference number: 4 (lower is better)
Translates to: GTDRRWLGCHSMVHSLAWAGGSI*AFPSTR
Trigger: TCTGGTAGAAGGGAAAGCCCATATGCTACCACCAGC...CCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCGGGGATGGGCGAGGCTaGCTGAGGAAGAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPGDGRG*LRKNRA
Trigger: AGCTCTGTTCTTCCTCAGCCAGCCTCGCCCATCCCC...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTCAGCTCTGAGACCTCAAGGGGATaGGCGAGGCTGGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: PVGNKGWARSAKATTFSSETSRG*ARLAEE
Trigger: TTCCTCAGCCAGCCTCGCCCATCCCCTTGAGGTCTC...AGAGCTGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCGCCCTTCAGAACCTTTaGGCCCAGGTCACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLALQNL*AQVTLK
Trigger: CTTCAGGGTGACCTGGGCCCAAAGGTTCTGAAGGGC...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGCAGATCGTTCATGATTaGGTTCAATGCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREQIVHD*VQCLLF
Trigger: GAACAGGAGGCATTGAACTCAATCATGAACGATCTG...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGCAGATCGTTCATGATTaGGTTCAATGCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVQIVHD*VQCLLF
Trigger: GAACAGGAGGCATTGAACTCAATCATGAACGATCTG...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTCTGCCTATTTGAGTaGCCTGTGTCTTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSLCLFE*PVSLFF
Trigger: GAAGAACAAAGACACAGGTCACTCAAATAGGCAGAG...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361733.8
CDS-3UTR TCA 90 bp CCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTCAGCTCTGGATGGGCTGTCTGCTaGCCTGTCCAAGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: PVGNKGWARSAKATTFSSGWAVC*PVQGLA
Trigger: TGCCAATCCTTGGACAGGTCAGCAGACAGCCCATCC...AGAGCTGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGGGCACGGGACATTCGTaGTTTCCGGAAGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: GLPLHGPQPCLGEAATSLGTGHS*FPEGWA
Trigger: AGCCCATCCTTCCGGAAATCACGAATGTCCCGTGCC...CAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp TGGCCAGGCCAGATGCCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGCTGGCATGTACTCCATaGAGATGGTCAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: WPGQMPRPCRPSPLLLQWLACTP*RWSGSS
Trigger: AGAAGACCCTGACCATCTTCATGGAGTACATGCCAG...CCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGGCATCTGGCCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GGGTCAGTGGTCGCCTCAGCTCTCAGGGCCCTAGTTCTGCCCGCCTGGGTTCAGCCCTTAATGTCCCGGTaGACAATCATGTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GSVVASALRALVLPAWVQPLMSR*TIMLLC
Trigger: GCACAGCAACATGATTGTTCACCGGGACATTAAGGG...CTGAACCCAGGCGGGCAGAACTAGGGCCCTGAGAGCTGAGGCGACCACTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581732.1
CDS-3UTR TCA 90 bp CACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGACCCTTAATGTCCCGGTaGACAATCATGTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: HRPTLAGLPLHGPQPCLGPLMSR*TIMLLC
Trigger: GCACAGCAACATGATTGTTCACCGGGACATTAAGGG...TCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CAAAAATGCGCCTCAGGAAGTCCCGGCCATGTTCAGAGATGTGGGAGGGCAGCTGAGCAGCTCCTCAGCTaGAGGTCTCTGGCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: QKCASGSPGHVQRCGRAAEQLLS*RSLASL
Trigger: GAGGCTCGCCAGAGACCTTCAGCTGAGGAGCTGCTC...AGCTGCCCTCCCACATCTCTGAACATGGCCGGGACTTCCTGAGGCGCATTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp ACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAGGCTCCTCCTTCCCTaGATAAGGCAGCATGACATT +
Preference number: 4 (lower is better)
Translates to: TDRRWLGCHSMVHSLAWERLLLP*IRQHDI
Trigger: AATGTCATGCTGCCTTATTCAGGGAAGGAGGAGCCT...CTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGAGCTCTGTAAGACCCTaGACCTGGGACGCACAGTTG +
Preference number: 4 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQESSVRP*TWDAQL
Trigger: CAACTGTGCGTCCCAGGTTCAGGGTCTTACAGAGCT...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp CCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTCAGCTCTGGAATGATGAGAAAGTaGCGGCACGGCCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PVGNKGWARSAKATTFSSGMMRK*RHGPFP
Trigger: TGGGAAGGGGCCGTGCCGTCACTTTCTCATCATTCC...AGAGCTGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCACTGGCCCCTGCACATaGGCTTGTTGTTACTGTGGG +
Preference number: 4 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLTGPCT*ACCYCG
Trigger: CCCACAGTAACAACAAGCTCATGTGCAGGGGCCAGT...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000579585.5
CDS-3UTR GCA 90 bp CTGTTGTCAGGGAAGCTCTGGGCACGGGACATTCGTGATTTCCGGAAGGATGGGCCCTGCCGGGCAATGTaGTGCTGCCGCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: LLSGKLWARDIRDFRKDGPCRAM*CCRSGT
Trigger: TGTTCCTGAGCGGCAGCAGCACATTGCCCGGCAGGG...CCCATCCTTCCGGAAATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000585302.1
CDS-3UTR GCA 90 bp CCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTCAGCTCTGGATCCAGCATGCACTaGTCGCTGGTCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: PVGNKGWARSAKATTFSSGSSMH*SLVSGM
Trigger: CATCCCAGAGACCAGCGAGCAGTGCATGCTGGATCC...AGAGCTGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTAGGAATTTTCTGCACTaGTCAGGGGATCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLRNFLH*SGDPAC
Trigger: GCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCT...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGGGGGAAATGTTCTTCTaGCATCACTGTAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWGEMFF*HHCSPC
Trigger: ACAAGGACTACAGTGATGGCAGAAGAACATTTCCCC...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTCAGCTCTTGTTCTCGCCATTTGTaGTCAGGGAGCGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PVGNKGWARSAKATTFSSCSRHL*SGSGWR
Trigger: CCTCCAGCCGCTCCCTGAGCACAAATGGCGAGAACA...AGAGCTGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCGGATCAAATTGGACCTaGTTGGAAGCAAGTTCACGT +
Preference number: 4 (lower is better)
Translates to: AAPCHAAKGDRQLCGRESGSNWT*LEASSR
Trigger: ACGTGAACTTGCTTCCAAGCAGGTCCAATTTGATCC...GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCTGGGGGCTCCCAGAGCACTCACCTCCTTaGTTGTCTCAGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: HAELRTLELLDLTGWGLPEHSPP*LSQDCL
Trigger: CAGACAGTCCTGAGACAAGCAAGGAGGTGAGTGCTC...TGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAACGATGCGCTCATGCTaGAAGTTCTTTAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRTMRSC*KFFSNW
Trigger: CCAGTTGCTAAAGAACTTGCAGCATGAGCGCATCGT...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCCAGGCTCCACACGTCTaGTTTCCTTCCATAGCCCTC +
Preference number: 4 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLQAPHV*FPSIAL
Trigger: GAGGGCTATGGAAGGAAAGCAGACGTGTGGAGCCTG...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATCAGGCTCCACACGTCTaGTTTCCTTCCATAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHQAPHV*FPSIAL
Trigger: GAGGGCTATGGAAGGAAAGCAGACGTGTGGAGCCTG...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCATCTCCACCACAGTaGAGCCCAGGCTCCACACGT +
Preference number: 4 (lower is better)
Translates to: LHGPQPCLGEAATSLSPAASPPQ*SPGSTR
Trigger: ACGTGTGGAGCCTGGGCTGCACTGTGGTGGAGATGC...TGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGACATAGCTTCATACTCTaGCCACGGTGGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRHSFIL*PRWFLC
Trigger: ACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATG...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp TCAATGCAGCCTAGGCCCAAGCCCAAAGCAGGGGTACTCAGAGCCCAGAGGGCAGAGCCTCCACAAAAATaGGCCTCAGGAAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SMQPRPKPKAGVLRAQRAEPPQK*ASGSPG
Trigger: GCCGGGACTTCCTGAGGCGCATTTTTGTGGAGGCTC...TGCCCTCTGGGCTCTGAGTACCCCTGCTTTGGGCTTGGGCCTAGGCTGCATTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCGAGCCTCCACAAAAATaGGCCTCAGGAAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPEPPQK*ASGSPG
Trigger: GCCGGGACTTCCTGAGGCGCATTTTTGTGGAGGCTC...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGGGCCCAACTGGCGCATaGGACACACACTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQEGPTGA*DTHFCK
Trigger: TTTGCAGAAGTGTGTGTCGCATGCGCCAGTTGGGCC...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGCCTGTTCGTCCATGGTaGCGATGGCGGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGPVRPW*RWRRRW
Trigger: CCACCGCCGCCGCCATCGCCACCATGGACGAACAGG...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCTGTCTTTGTTCTTCATaGTCTCATATCCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: AQQQPPAMQQRATGSCVACLCSS*SHIQAS
Trigger: GGATGCCTGGATATGAGACCATGAAGAACAAAGACA...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GTGGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGGAGAGGAACTGTTATaGTTTCTGTCCTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: VAEGAQTDAGWAATPWSTGEELL*FLSWDN
Trigger: GTTGTCCCAGGACAGAAACCATAACAGTTCCTCTCC...TGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAATTGTCAGGGAAGCTCTaGGCACGGGACATTCGTGAT +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQLSGKL*ARDIRD
Trigger: ATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAA...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CAGCTTCCAGACAAGGAATTTTCTGCACTGCTCAGGGGATCCAGCATGCACTGCCTGCCGAAGGCACCCTaGCCCAGGAGCTTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: QLPDKEFSALLRGSSMHCLPKAP*PRSFPR
Trigger: CCGGGGAAAGCTCCTGGGCCAGGGTGCCTTCGGCAG...GCAGTGCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGCTGTCTGGATCAAATTaGACCTGCTTGGAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGRELSGSN*TCLEAS
Trigger: ACTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAG...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCAAGTTCTTTAGCAACTaGATCTCGCACTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSKFFSN*ISHSRA
Trigger: TGCTCTGGAGTGCGAGATCCAGTTGCTAAAGAACTT...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGACACATCCCCGAGGGTaGGGCCCACGGCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGTHPRG*GPRLPC
Trigger: GCAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGT...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp TGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTTGCCCCCAGACCCTCTaGGCTTCGGTGCCAATTGCA +
Preference number: 4 (lower is better)
Translates to: WAATPWSTALPGRSSNFTCPQTL*ASVPIA
Trigger: TGCAATTGGCACCGAAGCCCAGAGGGTCTGGGGGCA...AGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCAGCCCAGAGATGCCCTaGTGGTCTCCAGACATTGGA +
Preference number: 4 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLSPEMP*WSPDIG
Trigger: TCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCT...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CAGGGATGGACACAGGAGGGTCCAGGCCCAACTGGCGCATGCGACACACACTTCTTTCCCTCAGGCTTGTaGGAGCTCATCCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QGWTQEGPGPTGACDTHFFPSGL*ELIQPR
Trigger: TCTGGGCTGGATGAGCTCCCACAAGCCTGAGGGAAA...GAAGTGTGTGTCGCATGCGCCAGTTGGGCCTGGACCCTCCTGTGTCCATCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp CGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCATTCCCTTCTACCAGATaGAGTGGGCTCTGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: RPCRPSPLLLQWGTKAGPFPSTR*SGLWPS
Trigger: GCTAGGCCAGAGCCCACTCCATCTGGTAGAAGGGAA...TGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGTGCGCAACACTGGCCTaGCTTTGCACTGCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLPLHGPQPCLGEAATSLCATLA*LCTASP
Trigger: AGGGCTTGCAGTGCAAAGCCAGGCCAGTGTTGCGCA...CAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAAGGGCTGTCCAAGGATTaGCAGCTTCCAGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQGLSKD*QLPDKE
Trigger: TTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCC...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584573.5
3UTR CAA 72 bp GTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTaGGAGGGGAGGGGCCGGAAGAAAGGACCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: VLRGRSSSNRHI*EGRGRKKGPAP
Trigger: GGGCGCTGGTCCTTTCTTCCGGCCCCTCCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGACAGATCGTTCATGATTaGGTTCAATGCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRQIVHD*VQCLLF
Trigger: GAACAGGAGGCATTGAACTCAATCATGAACGATCTG...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp TGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTACTCCCCCTCACTGTTaGTGCTGGTGTAGGACCCCT +
Preference number: 4 (lower is better)
Translates to: WAATPWSTALPGRSSNFTTPPHC*CWCRTP
Trigger: AGGGGTCCTACACCAGCATCAACAGTGAGGGGGAGT...AGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGGTAGGTTCCACCTTTaGCCCCTTTGTCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLGRFHL*PLCHKA
Trigger: AGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACC...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp TGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCTGGAGGGCACCAGGGTaGACAAGTTGCCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: WSTALPGRSSNFTEPSSSWRAPG*TSCLDD
Trigger: GTCATCAAGGCAACTTGTTCACCCTGGTGCCCTCCA...GCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCTGGAGGGCACCAGGGTaGACAAGTTGCCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPWRAPG*TSCLDD
Trigger: GTCATCAAGGCAACTTGTTCACCCTGGTGCCCTCCA...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GGTGTGCCAGTGACGGAGCGCATGCCCGTCCCCGACATACAGATCGTCTGCAGGCCCTTAATGTCCCGGTaGACAATCATGTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GVPVTERMPVPDIQIVCRPLMSR*TIMLLC
Trigger: GCACAGCAACATGATTGTTCACCGGGACATTAAGGG...CCTGCAGACGATCTGTATGTCGGGGACGGGCATGCGCTCCGTCACTGGCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR TCA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCGTGCAAAGTGGTGTGTaGGCAGCTCCTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPVQSGV*AAPQLK
Trigger: CTTCAGCTGAGGAGCTGCTCACACACCACTTTGCAC...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CCTGTCTGGACACCCCAGAGTGGGGAGAGGAACTGTTATGGTTTCTGTCCTGGGAAGCAGCAACTTCACTaGGCCCAGCAGCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PVWTPQSGERNCYGFCPGKQQLH*AQQQPP
Trigger: AGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTT...CCCAGGACAGAAACCATAACAGTTCCTCTCCCCACTCTGGGGTGTCCAGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp GAGCGCAAAGGCCACAACCTTCAGCTCTTTTCAATGCAGCCTAGGCCCAAGCCCACAAGGGAAAGGGGCTaGGACCTCAAGGGGATGGGC +
Preference number: 4 (lower is better)
Translates to: ERKGHNLQLFSMQPRPKPTRERG*DLKGMG
Trigger: GCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGT...GGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAAGGTTGTGGCCTTTGCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCGCTGTTCAGAAGGGCTaGGCTGCTGCTGTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: GPQPCLGEAATSLSPAAAAVQKG*AAAVVF
Trigger: AAACACAACAGCAGCAGCTCAGCCCTTCTGAACAGC...GGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGGCTTCGGTGCCAATTGGCACATTCCTCTCCTaGACAGAGAGGGCATTCTCG +
Preference number: 4 (lower is better)
Translates to: HTLASVLCPQTLWASVPIGTFLS*TERAFS
Trigger: CGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCC...AATTGGCACCGAAGCCCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCGAGCACTCACCTCCTTaGTTGTCTCAGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: PSAPVGNKGWARSAKATTEHSPP*LSQDCL
Trigger: CAGACAGTCCTGAGACAAGCAAGGAGGTGAGTGCTC...GGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp ACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGACGATGCGCTCATGCTaGAAGTTCTTTAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: TDRRWLGCHSMVHSLAWETMRSC*KFFSNW
Trigger: CCAGTTGCTAAAGAACTTGCAGCATGAGCGCATCGT...CTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp AAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCGGTGAACAATCATGTTaGTGTGCAGGTAGGACATGC +
Preference number: 4 (lower is better)
Translates to: KGHRPTLAGLPLHGPQPCGEQSC*CAGRTC
Trigger: GCATGTCCTACCTGCACAGCAACATGATTGTTCACC...GCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp TCTCTGTCAGAGCACCGTAAGCCTTCAACTGGTCTTTCACCGAGCCCCCTGGCATCGTCTGCAGGCGTTTaGTGGCCCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SLSEHRKPSTGLSPSPLASSAGV*WPQSPP
Trigger: TGGGGGACTTTGGGGCCAGCAAACGCCTGCAGACGA...TGCCAGGGGGCTCGGTGAAAGACCAGTTGAAGGCTTACGGTGCTCTGACAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR GCA 90 bp TCAATGCAGCCTAGGCCCAAGCCCAAAGCAGGGGTACTCAGAGCCCAGAGGGCACAGGCTCCACACGTCTaGTTTCCTTCCATAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SMQPRPKPKAGVLRAQRAQAPHV*FPSIAL
Trigger: GAGGGCTATGGAAGGAAAGCAGACGTGTGGAGCCTG...TGCCCTCTGGGCTCTGAGTACCCCTGCTTTGGGCTTGGGCCTAGGCTGCATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CATACTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCCACCACAGTGCAGCCCAGCATCTCCACCACAGTaGAGCCCAGGCTCCACACGT +
Preference number: 4 (lower is better)
Translates to: HTLPTVVSLSASPPQCSPASPPQ*SPGSTR
Trigger: ACGTGTGGAGCCTGGGCTGCACTGTGGTGGAGATGC...TGGGCTGCACTGTGGTGGAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp ACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGTCAGTACATGAGCTGTaGAAAGTGGTGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: TDRRWLGCHSMVHSLAWESVHEL*KVVCEQ
Trigger: CTGCTCACACACCACTTTGCACAGCTCATGTACTGA...CTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGTCAGTACATGAGCTGTaGAAAGTGGTGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RRWLGCHSMVHSLAWEKQSVHEL*KVVCEQ
Trigger: CTGCTCACACACCACTTTGCACAGCTCATGTACTGA...CTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAATGGCCAACTCTAAGCTaGTTGGAGATGCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQWPTLS*LEMLFP
Trigger: GGGAAACAGCATCTCCAAGCAGCTTAGAGTTGGCCA...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGCGATGGCGGCGGCGGTaGCTAAGGTCCGTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGRWRRR*LRSVSV
Trigger: GACACTCACGGACCTTAGCCACCGCCGCCGCCATCG...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGTGTCTTTGTTCTTCATaGTCTCATATCCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: AAAPCHAAKGDRQLCGRECLCSS*SHIQAS
Trigger: GGATGCCTGGATATGAGACCATGAAGAACAAAGACA...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGGTTTTTCAGCAGGATaGAGAGCTCATTGTTCATGT +
Preference number: 4 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRGFSAG*RAHCSC
Trigger: ACATGAACAATGAGCTCTCCATCCTGCTGAAAAACC...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp ACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGGGAGAGGAACTGTTATaGTTTCTGTCCTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: TDRRWLGCHSMVHSLAWEGEELL*FLSWDN
Trigger: GTTGTCCCAGGACAGAAACCATAACAGTTCCTCTCC...CTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCTGCCGCTCAGGAACATAGCCAGGGGGAGGTGAGCTTCGGCCAGGGTTCTGGGGGAGAGGAACTGTTATaGTTTCTGTCCTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: AAAQEHSQGEVSFGQGSGGEELL*FLSWDN
Trigger: GTTGTCCCAGGACAGAAACCATAACAGTTCCTCTCC...CCCAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTATGTTCCTGAGCGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCCTGGACACCCCAGAGTaGGGAGAGGAACTGTTATGG +
Preference number: 4 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPLDTPE*GEELLW
Trigger: CCATAACAGTTCCTCTCCCCACTCTGGGGTGTCCAG...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTTCACCGAGCCCCCTaGCATGTACTCCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: AGWAATPWSTALPGRSSNFHRAP*HVLHED
Trigger: ATCTTCATGGAGTACATGCCAGGGGGCTCGGTGAAA...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATTTCACCGAGCCCCCTaGCATGTACTCCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPFHRAP*HVLHED
Trigger: ATCTTCATGGAGTACATGCCAGGGGGCTCGGTGAAA...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp TCTTTAGCAACTGGATCTCGCACTCCAGAGCACTCACCTCCTAGGGGAGGGGTCTCTGCAGGCGTTTGCTaGCCCCAAAGTCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLATGSRTPEHSPPRGGVSAGVC*PQSPPA
Trigger: AGCTGGGGGACTTTGGGGCCAGCAAACGCCTGCAGA...GACCCCTCCCCTAGGAGGTGAGTGCTCTGGAGTGCGAGATCCAGTTGCTAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000581732.1
CDS-3UTR CCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCTCAGCTGAAGGTCTCTaGCGAGCCTCCACAAAAATG +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCSAEGL*RASTKM
Trigger: CATTTTTGTGGAGGCTCGCCAGAGACCTTCAGCTGA...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp TGTAGGACCCCTGCCGGGCAATGTGCTGCTGCCGCTCAGGAACATAGCCAGGGGTCAGCTGAAGGTCTCTaGCGAGCCTCCACAAAAATG +
Preference number: 4 (lower is better)
Translates to: CRTPAGQCAAAAQEHSQGSAEGL*RASTKM
Trigger: CATTTTTGTGGAGGCTCGCCAGAGACCTTCAGCTGA...CCCCTGGCTATGTTCCTGAGCGGCAGCAGCACATTGCCCGGCAGGGGTCCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAATCAGCTGAAGGTCTCTaGCGAGCCTCCACAAAAATG +
Preference number: 4 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQSAEGL*RASTKM
Trigger: CATTTTTGTGGAGGCTCGCCAGAGACCTTCAGCTGA...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCCCAGAGATGCCCTGGTaGTCTCCAGACATTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PWSTALPGRSSNFTEPSSPEMPW*SPDIGR
Trigger: CCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGG...GCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp TGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCTTTCCCTCAGGCTTGTaGGAGCTCATCCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: WSTALPGRSSNFTEPSSSFPSGL*ELIQPR
Trigger: TCTGGGCTGGATGAGCTCCCACAAGCCTGAGGGAAA...GCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCACTGCTAGCGAGTGCTaGCCTTTCCCTCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PWSTALPGRSSNFTEPSSTASEC*PFPQAC
Trigger: ACAAGCCTGAGGGAAAGGCCAGCACTCGCTAGCAGT...GCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGGCTTCGGTGCCAATTACTGCTAGCGAGTGCTaGCCTTTCCCTCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: HTLASVLCPQTLWASVPITASEC*PFPQAC
Trigger: ACAAGCCTGAGGGAAAGGCCAGCACTCGCTAGCAGT...AATTGGCACCGAAGCCCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATGGGCTGTCCAAGGATTaGCAGCTTCCAGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHGLSKD*QLPDKE
Trigger: TTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCC...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577395.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCTTCGGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCCAGATCGTTCATGATTaGGTTCAATGCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: ASVPIAVSGHIPEGGAHGQIVHD*VQCLLF
Trigger: GAACAGGAGGCATTGAACTCAATCATGAACGATCTG...GCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACCGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCACCACCAGATCGTTCATaGTTGAGTTCAATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPPPDRS*LSSMPP
Trigger: AGGAGGCATTGAACTCAATCATGAACGATCTGGTGG...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACCCACCAGATCGTTCATaGTTGAGTTCAATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AGWAATPWSTALPGRSSNPPDRS*LSSMPP
Trigger: AGGAGGCATTGAACTCAATCATGAACGATCTGGTGG...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp AGCTCATCCAGCCCAGAGATGCCCTGGTGGTCTCCAGACATTGGAAGGAAAAACATAGCCAGGGGGAGGTaGGCTTCGGCCAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SSSSPEMPWWSPDIGRKNIARGR*ASARVL
Trigger: CAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTAT...GTTTTTCCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCTGGATGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CATACTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCCACCACAGTGCAGCCCAACTCCCCCTCACTGTTaGTGCTGGTGTAGGACCCCT +
Preference number: 4 (lower is better)
Translates to: HTLPTVVSLSASPPQCSPTPPHC*CWCRTP
Trigger: AGGGGTCCTACACCAGCATCAACAGTGAGGGGGAGT...TGGGCTGCACTGTGGTGGAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp CAGGGATGGACACAGGAGGGTCCAGGCCCAACTGGCGCATGCGACACACACTTCCTGGCATGTACTCCATaGAGATGGTCAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QGWTQEGPGPTGACDTHFLACTP*RWSGSS
Trigger: AGAAGACCCTGACCATCTTCATGGAGTACATGCCAG...GAAGTGTGTGTCGCATGCGCCAGTTGGGCCTGGACCCTCCTGTGTCCATCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR TCA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCCTTAATGTCCCGGTaGACAATCATGTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLPLMSR*TIMLLC
Trigger: GCACAGCAACATGATTGTTCACCGGGACATTAAGGG...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GCTCTCTGTCAGAGCACCGTAAGCCTTCAACTGGTCTTTCACCGAGCCCCCTGGGTGCAAAGTGGTGTGTaGGCAGCTCCTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ALCQSTVSLQLVFHRAPWVQSGV*AAPQLK
Trigger: CTTCAGCTGAGGAGCTGCTCACACACCACTTTGCAC...CCAGGGGGCTCGGTGAAAGACCAGTTGAAGGCTTACGGTGCTCTGACAGAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGAGGCTCCTCCTTCCCTaGATAAGGCAGCATGACATT +
Preference number: 4 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLRLLLP*IRQHDI
Trigger: AATGTCATGCTGCCTTATTCAGGGAAGGAGGAGCCT...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGTTCTGCCTATTTGAGTaGCCTGTGTCTTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GTDRRWLGCHSMVHSLAWFCLFE*PVSLFF
Trigger: GAAGAACAAAGACACAGGTCACTCAAATAGGCAGAA...CCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp GGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGGCTGTTCAGAAGGGCTaGGCTGCTGCTGTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: GLPLHGPQPCLGEAATSLAVQKG*AAAVVF
Trigger: AAACACAACAGCAGCAGCTCAGCCCTTCTGAACAGC...CAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGCCCCAAAGTCCCCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCCGCCTCTCCCCGTTGTaGTCGAACTTGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: GPKVPQLYIPSRVSEDVGRLSPL*SNLILT
Trigger: CGTCAGAATCAAGTTCGAGCACAACGGGGAGAGGCG...GCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGGGGACTTTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCACTGTTGTCACCTTGTaGTCCACATCTTCATATTTC +
Preference number: 4 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGTVVTL*STSSYF
Trigger: GAAATATGAAGATGTGGAGCACAAGGTGACAACAGT...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp AGCTCATCCAGCCCAGAGATGCCCTGGTGGTCTCCAGACATTGGAAGGAAAAACCCCTGCCGGGCAATGTaGTGCTGCCGCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: SSSSPEMPWWSPDIGRKNPCRAM*CCRSGT
Trigger: TGTTCCTGAGCGGCAGCAGCACATTGCCCGGCAGGG...GTTTTTCCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCTGGATGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATAGGAATTTTCTGCACTaGTCAGGGGATCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHRNFLH*SGDPAC
Trigger: GCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCT...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAATGTGCTGCTGCCGCTCAGGAACATAGCCAGGGGGAGGTGAGCTTCGGCCAGAGGAATTTTCTGCACTaGTCAGGGGATCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: QCAAAAQEHSQGEVSFGQRNFLH*SGDPAC
Trigger: GCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCT...CTGGCCGAAGCTCACCTCCCCCTGGCTATGTTCCTGAGCGGCAGCAGCACATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000585302.1
CDS-3UTR GCA 90 bp AAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCGGGGAAATGTTCTTCTaGCATCACTGTAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KGHRPTLAGLPLHGPQPCGEMFF*HHCSPC
Trigger: ACAAGGACTACAGTGATGGCAGAAGAACATTTCCCC...GCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGGGGAAATGTTCTTCTaGCATCACTGTAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLGEMFF*HHCSPC
Trigger: ACAAGGACTACAGTGATGGCAGAAGAACATTTCCCC...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGGGGGAAATGTTCTTCTaGCATCACTGTAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: EGAQTDAGWAATPWSTALGEMFF*HHCSPC
Trigger: ACAAGGACTACAGTGATGGCAGAAGAACATTTCCCC...CAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCGAGCACTCACCTCCTTaGTTGTCTCAGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPEHSPP*LSQDCL
Trigger: CAGACAGTCCTGAGACAAGCAAGGAGGTGAGTGCTC...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCACGATGCGCTCATGCTaGAAGTTCTTTAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCTMRSC*KFFSNW
Trigger: CCAGTTGCTAAAGAACTTGCAGCATGAGCGCATCGT...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp ACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCACATAGTACTGCACGATaGGCTCATGCTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: TLAGLPLHGPQPCLGEAAHSTAR*AHAASS
Trigger: AGAACTTGCAGCATGAGCGCATCGTGCAGTACTATG...TGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp TGGGAGACTTGGTTGGCACATTCCTCTCCTGCACAGAGAGGGCATTCTCGCTGTTCGTCTGCAGGCGTTTaGTGGCCCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: WETWLAHSSPAQRGHSRCSSAGV*WPQSPP
Trigger: TGGGGGACTTTGGGGCCAGCAAACGCCTGCAGACGA...ACAGCGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCCAACCAAGTCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp ACAAAAATGCGCCTCAGGAAGTCCCGGCCATGTTCAGAGATGTGGGAGGGCAGCGAGCCTCCACAAAAATaGGCCTCAGGAAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: TKMRLRKSRPCSEMWEGSEPPQK*ASGSPG
Trigger: GCCGGGACTTCCTGAGGCGCATTTTTGTGGAGGCTC...GCTGCCCTCCCACATCTCTGAACATGGCCGGGACTTCCTGAGGCGCATTTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp TCTCAGGACTGTCTGGATCAAATTGGACCTGCTTGGAAGCAAGTTCACGTCCCGCCAGCAGCAGCCCCCTaGCATGCAGCAAAGGGCGAC +
Preference number: 4 (lower is better)
Translates to: SQDCLDQIGPAWKQVHVPPAAAP*HAAKGD
Trigger: GTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG...CGGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAGTCCTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp GGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCTGGCCAACTCTAAGCTaGTTGGAGATGCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GPQPCLGEAATSLSPAAAWPTLS*LEMLFP
Trigger: GGGAAACAGCATCTCCAAGCAGCTTAGAGTTGGCCA...GGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GCTTCGGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCCACAATAACCATGGCTaGACGATCCACAATTCAGAC +
Preference number: 4 (lower is better)
Translates to: ASVPIAVSGHIPEGGAHGHNNHG*TIHNSD
Trigger: GTCTGAATTGTGGATCGTGCAGCCATGGTTATTGTG...GCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACCGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR GCA 90 bp CGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCACAATAACCATGGCTaGACGATCCACAATTCAGAC +
Preference number: 4 (lower is better)
Translates to: RRWLGCHSMVHSLAWEKQHNNHG*TIHNSD
Trigger: GTCTGAATTGTGGATCGTGCAGCCATGGTTATTGTG...CTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR GCA 90 bp GGCCCCAAAGTCCCCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCGGCCTCACAGGGATCTaGCTTGGGAACTTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GPKVPQLYIPSRVSEDVGGLTGI*LGNLLV
Trigger: GACAAGCAAGTTCCCAAGGCAGATCCCTGTGAGGCC...GCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGGGGACTTTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581732.1
CDS-3UTR CCA 90 bp GGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGTGTCTTTGTTCTTCATaGTCTCATATCCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: GTDRRWLGCHSMVHSLAWCLCSS*SHIQAS
Trigger: GGATGCCTGGATATGAGACCATGAAGAACAAAGACA...CCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCGGAGAGGAACTGTTATaGTTTCTGTCCTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCGEELL*FLSWDN
Trigger: GTTGTCCCAGGACAGAAACCATAACAGTTCCTCTCC...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCACTGGACACCCCAGAGTaGGGAGAGGAACTGTTATGG +
Preference number: 4 (lower is better)
Translates to: PLHGPQPCLGEAATSLSPLDTPE*GEELLW
Trigger: CCATAACAGTTCCTCTCCCCACTCTGGGGTGTCCAG...TGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGGACCTGTCCAAGGATTaGCAGCTTCCAGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQEDLSKD*QLPDKE
Trigger: TTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGGTC...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATGACCTGTCCAAGGATTaGCAGCTTCCAGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHDLSKD*QLPDKE
Trigger: TTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGGTC...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577597.5
ENST00000579585.5
CDS-3UTR CCA 90 bp CCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTCAGCTCTTTGTCAGGGAAGCTCTaGGCACGGGACATTCGTGAT +
Preference number: 4 (lower is better)
Translates to: PVGNKGWARSAKATTFSSLSGKL*ARDIRD
Trigger: ATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAA...AGAGCTGAAGGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCAAATTGGACCTGCTTaGAAGCAAGTTCACGTCCCG +
Preference number: 4 (lower is better)
Translates to: GPQPCLGEAATSLSPAAAQIGPA*KQVHVP
Trigger: CGGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTG...GGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CAGGGATGGACACAGGAGGGTCCAGGCCCAACTGGCGCATGCGACACACACTTCCAAATTGGACCTGCTTaGAAGCAAGTTCACGTCCCG +
Preference number: 4 (lower is better)
Translates to: QGWTQEGPGPTGACDTHFQIGPA*KQVHVP
Trigger: CGGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTG...GAAGTGTGTGTCGCATGCGCCAGTTGGGCCTGGACCCTCCTGTGTCCATCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp CACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGACTGTCTGGATCAAATTaGACCTGCTTGGAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: HRPTLAGLPLHGPQPCLGLSGSN*TCLEAS
Trigger: ACTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAG...TCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GGGTCAGTGGTCGCCTCAGCTCTCAGGGCCCTAGTTCTGCCCGCCTGGGTTCAGAAGTTCTTTAGCAACTaGATCTCGCACTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GSVVASALRALVLPAWVQKFFSN*ISHSRA
Trigger: TGCTCTGGAGTGCGAGATCCAGTTGCTAAAGAACTT...CTGAACCCAGGCGGGCAGAACTAGGGCCCTGAGAGCTGAGGCGACCACTGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581732.1
CDS-3UTR CCA 90 bp GCCAGTGACGGAGCGCATGCCCGTCCCCGACATACAGATCGTCTGCAGGCGTTTTTTCACCGAGCCCCCTaGCATGTACTCCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: ASDGAHARPRHTDRLQAFFHRAP*HVLHED
Trigger: ATCTTCATGGAGTACATGCCAGGGGGCTCGGTGAAA...AAACGCCTGCAGACGATCTGTATGTCGGGGACGGGCATGCGCTCCGTCACTGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR CCA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGTTTCACCGAGCCCCCTaGCATGTACTCCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLFHRAP*HVLHED
Trigger: ATCTTCATGGAGTACATGCCAGGGGGCTCGGTGAAA...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp AGCTCATCCAGCCCAGAGATGCCCTGGTGGTCTCCAGACATTGGAAGGAAAAACGTGGGGAACAAAGGCTaGGCCAGGAGCGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SSSSPEMPWWSPDIGRKNVGNKG*ARSAKA
Trigger: GGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCAC...GTTTTTCCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCTGGATGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGAGCTTGTTGTTACTGTaGGGCTGTTCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLSLLLL*GCSEGL
Trigger: CAGCCCTTCTGAACAGCCCCACAGTAACAACAAGCT...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
3UTR CAA 72 bp GGAGCGGCTGGAGGGCACCAGGGTGAACAAGTTGCCTaGATGACGCCGTATTCGGGGAAATGTTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GAAGGHQGEQVA*MTPYSGKCSSA
Trigger: GGCAGAAGAACATTTCCCCGAATACGGCGTCATCAAGGCAACTTGTTCACCCTGGTGCCCTCCAGCCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp CGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCACCACCAGATCGTTCATaGTTGAGTTCAATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPCRPSPLLLQWGTKAGPPPDRS*LSSMPP
Trigger: AGGAGGCATTGAACTCAATCATGAACGATCTGGTGG...TGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCTGGGGGCTCCCAGTCACTCTGCCTATTTaGGTGACCTGTGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: HAELRTLELLDLTGWGLPVTLPI*VTCVFV
Trigger: AACAAAGACACAGGTCACTCAAATAGGCAGAGTGAC...TGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361733.8
CDS-3UTR TCA 90 bp GTGATTTCCGGAAGGATGGGCTGTCCAAGGATTGGCAGCTTCCAGACAAGGAATATAGCCAGGGGGAGGTaGGCTTCGGCCAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VISGRMGCPRIGSFQTRNIARGR*ASARVL
Trigger: CAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTAT...ATTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCCATCCTTCCGGAAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS-3UTR TCA 90 bp GATGGCGGCCATAGCTTCATACTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCGGATGGGCTGTCTGCTaGCCTGTCCAAGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: DGGHSFILCPRWFLCQHLGWAVC*PVQGLA
Trigger: TGCCAATCCTTGGACAGGTCAGCAGACAGCCCATCC...GAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATGGCCGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp TGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCCTGGTAGGTTCCACCTTTaGCCCCTTTGTCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: WSGLWPSRSRLRQPETPPGRFHL*PLCHKA
Trigger: AGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACC...AGGAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATGGTAGGTTCCACCTTTaGCCCCTTTGTCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHGRFHL*PLCHKA
Trigger: AGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACC...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR TCA 90 bp CTTCTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATGCGCTCATGCTGCTGGCATGTACTCCATaGAGATGGTCAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLSAVPQTAIVLHDALMLLACTP*RWSGSS
Trigger: AGAAGACCCTGACCATCTTCATGGAGTACATGCCAG...CAGCATGAGCGCATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR TCA 90 bp TCAATGCAGCCTAGGCCCAAGCCCAAAGCAGGGGTACTCAGAGCCCAGAGGGCAAGGCTCCTCCTTCCCTaGATAAGGCAGCATGACATT +
Preference number: 4 (lower is better)
Translates to: SMQPRPKPKAGVLRAQRARLLLP*IRQHDI
Trigger: AATGTCATGCTGCCTTATTCAGGGAAGGAGGAGCCT...TGCCCTCTGGGCTCTGAGTACCCCTGCTTTGGGCTTGGGCCTAGGCTGCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp ACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGTTCTGCCTATTTGAGTaGCCTGTGTCTTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TDRRWLGCHSMVHSLAWEFCLFE*PVSLFF
Trigger: GAAGAACAAAGACACAGGTCACTCAAATAGGCAGAA...CTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAACTGTTGTCACCTTGTaGTCCACATCTTCATATTTC +
Preference number: 4 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRTVVTL*STSSYF
Trigger: GAAATATGAAGATGTGGAGCACAAGGTGACAACAGT...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CACGGGACATTCGTGATTTCCGGAAGGATGGGCTGTCCAAGGATTGGCAGCTTCGGATCCAGCATGCACTaGTCGCTGGTCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: HGTFVISGRMGCPRIGSFGSSMH*SLVSGM
Trigger: CATCCCAGAGACCAGCGAGCAGTGCATGCTGGATCC...GAAGCTGCCAATCCTTGGACAGCCCATCCTTCCGGAAATCACGAATGTCCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS-3UTR GCA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACGGATCAAATTGGACCTaGTTGGAAGCAAGTTCACGT +
Preference number: 4 (lower is better)
Translates to: AGWAATPWSTALPGRSSNGSNWT*LEASSR
Trigger: ACGTGAACTTGCTTCCAAGCAGGTCCAATTTGATCC...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAACGATGCGCTCATGCTaGAAGTTCTTTAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: RPCRPSPLLLQWGTKAGPTMRSC*KFFSNW
Trigger: CCAGTTGCTAAAGAACTTGCAGCATGAGCGCATCGT...TGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp AGGAGCTACAAGGGAAAGGGGCTGAGACCTCAAGGGGATGGGCGAGGCTGGCTGTGCACGATGCGCTCATaGTGCAAGTTCTTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: RSYKGKGLRPQGDGRGWLCTMRS*CKFFSN
Trigger: GTTGCTAAAGAACTTGCAGCATGAGCGCATCGTGCA...CAGCCAGCCTCGCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGTAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATTGCACGATGCGCTCATaGTGCAAGTTCTTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHCTMRS*CKFFSN
Trigger: GTTGCTAAAGAACTTGCAGCATGAGCGCATCGTGCA...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCATAGTACTGCACGATaGGCTCATGCTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQEHSTAR*AHAASS
Trigger: AGAACTTGCAGCATGAGCGCATCGTGCAGTACTATG...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTAATGTCCCGTGTGCAGGTAGGACATaGCCTCCAGGATCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: QLYIPSRVSEDVGSLNVPCAGRT*PPGSAA
Trigger: CGCGGCAGATCCTGGAGGGCATGTCCTACCTGCACA...CGGGACATTAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR GCA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCATAGCTTCATACTCTaGCCACGGTGGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQEHSFIL*PRWFLC
Trigger: ACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATG...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp TGGCCAGGCCAGATGCCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGTCAAATAACTATGGCTaGAGGTTCCACAGTTCCACA +
Preference number: 4 (lower is better)
Translates to: WPGQMPRPCRPSPLLLQWSNNYG*RFHSST
Trigger: TGTGGAACTGTGGAACCTGCAGCCATAGTTATTTGA...CCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGGCATCTGGCCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp TGGCCAGGCCAGATGCCCCGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGTGTCTTTGTTCTTCATaGTCTCATATCCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: WPGQMPRPCRPSPLLLQWCLCSS*SHIQAS
Trigger: GGATGCCTGGATATGAGACCATGAAGAACAAAGACA...CCACTGGAGCAGAAGGGGAGATGGACGACACGGTCGGGGCATCTGGCCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGGGTTTTTCAGCAGGATaGAGAGCTCATTGTTCATGT +
Preference number: 4 (lower is better)
Translates to: EGAQTDAGWAATPWSTALGFSAG*RAHCSC
Trigger: ACATGAACAATGAGCTCTCCATCCTGCTGAAAAACC...CAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCATTGTCAGGGAAGCTCTaGGCACGGGACATTCGTGAT +
Preference number: 4 (lower is better)
Translates to: LHGPQPCLGEAATSLSPALSGKL*ARDIRD
Trigger: ATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAA...TGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CAACTGGATCTCGCACTCCAGAGCACTCACCTCCTAGGGGAGGGGTCAGTGGTCCAAATTGGACCTGCTTaGAAGCAAGTTCACGTCCCG +
Preference number: 4 (lower is better)
Translates to: QLDLALQSTHLLGEGSVVQIGPA*KQVHVP
Trigger: CGGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTG...GACCACTGACCCCTCCCCTAGGAGGTGAGTGCTCTGGAGTGCGAGATCCAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581732.1
CDS-3UTR CCA 90 bp TGTAGGACCCCTGCCGGGCAATGTGCTGCTGCCGCTCAGGAACATAGCCAGGGGCTGTCTGGATCAAATTaGACCTGCTTGGAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: CRTPAGQCAAAAQEHSQGLSGSN*TCLEAS
Trigger: ACTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAG...CCCCTGGCTATGTTCCTGAGCGGCAGCAGCACATTGCCCGGCAGGGGTCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCACTGTCTGGATCAAATTaGACCTGCTTGGAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPLSGSN*TCLEAS
Trigger: ACTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAG...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCAAGTTCTTTAGCAACTaGATCTCGCACTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCKFFSN*ISHSRA
Trigger: TGCTCTGGAGTGCGAGATCCAGTTGCTAAAGAACTT...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCTTTCACCGAGCCCCCTaGCATGTACTCCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPFHRAP*HVLHED
Trigger: ATCTTCATGGAGTACATGCCAGGGGGCTCGGTGAAA...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GAGCGCAAAGGCCACAACCTTCAGCTCTTTTCAATGCAGCCTAGGCCCAAGCCCACACTCTTCATACCCTaGCGTCAGTCTTGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: ERKGHNLQLFSMQPRPKPTLFIP*RQSCAP
Trigger: GGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGT...GGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAAGGTTGTGGCCTTTGCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCTTGTTGTTACTGTaGGGCTGTTCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PWSTALPGRSSNFTEPSSSLLLL*GCSEGL
Trigger: CAGCCCTTCTGAACAGCCCCACAGTAACAACAAGCT...GCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GGCCCCAAAGTCCCCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCCACAGGGATCTGCCTTaGGAACTTGCTTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GPKVPQLYIPSRVSEDVGHRDLP*ELACLR
Trigger: CCTGAGACAAGCAAGTTCCCAAGGCAGATCCCTGTG...GCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGGGGACTTTGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581732.1
CDS-3UTR TCA 90 bp CTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATGCGCTCATGCTGCAACCACCAGATCGTTCATaGTTGAGTTCAATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSAVPQTAIVLHDALMLQPPDRS*LSSMPP
Trigger: AGGAGGCATTGAACTCAATCATGAACGATCTGGTGG...TTGCAGCATGAGCGCATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp CAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTAATGTCCCGTATCCAGGCATCCGGTaGCGTCGGTTCATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QLYIPSRVSEDVGSLNVPYPGIR*RRFIWR
Trigger: CCTCCAGATGAACCGACGTCACCGGATGCCTGGATA...CGGGACATTAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATCTCTGCCTATTTGAGTaGCCTGTGTCTTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHLCLFE*PVSLFF
Trigger: GAAGAACAAAGACACAGGTCACTCAAATAGGCAGAG...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361733.8
ENST00000577395.5
CDS-3UTR TCA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGGTCACTCTGCCTATTTaGGTGACCTGTGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLVTLPI*VTCVFV
Trigger: AACAAAGACACAGGTCACTCAAATAGGCAGAGTGAC...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361733.8
ENST00000577395.5
CDS-3UTR TCA 90 bp TCATTCATCTTTGGTAAAGGACAGGACTGGCAGAGCCAACCTGGGACTCTAGGGCGGACTGGGAAGCCTTaGTCCGCACCTGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: SFIFGKGQDWQSQPGTLGRTGKP*SAPVWT
Trigger: TGTCCAGACAGGTGCGGATCAAGGCTTCCCAGTCCG...CCCTAGAGTCCCAGGTTGGCTCTGCCAGTCCTGTCCTTTACCAAAGATGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GTAGCGCCGGGGGTAGGTTCCACCTTTGACCCCTTTGTCATAAAGCTGAGTTTCACTCCCCCTCACTGTTaGTGCTGGTGTAGGACCCCT +
Preference number: 4 (lower is better)
Translates to: VAPGVGSTFDPFVIKLSFTPPHC*CWCRTP
Trigger: AGGGGTCCTACACCAGCATCAACAGTGAGGGGGAGT...GAAACTCAGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACCCCCGGCGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000585302.1
CDS-3UTR TCA 90 bp GATGGCGGCCATAGCTTCATACTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCTGGAGGGCACCAGGGTaGACAAGTTGCCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: DGGHSFILCPRWFLCQHLWRAPG*TSCLDD
Trigger: GTCATCAAGGCAACTTGTTCACCCTGGTGCCCTCCA...GAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATGGCCGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp TGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTCTGGCATGTACTCCATaGAGATGGTCAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: WAATPWSTALPGRSSNFTLACTP*RWSGSS
Trigger: AGAAGACCCTGACCATCTTCATGGAGTACATGCCAG...AGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCTTCGGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCACTGTTGTCACCTTGTaGTCCACATCTTCATATTTC +
Preference number: 4 (lower is better)
Translates to: ASVPIAVSGHIPEGGAHGTVVTL*STSSYF
Trigger: GAAATATGAAGATGTGGAGCACAAGGTGACAACAGT...GCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACCGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTACTGTTGTCACCTTGTaGTCCACATCTTCATATTTC +
Preference number: 4 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLTVVTL*STSSYF
Trigger: GAAATATGAAGATGTGGAGCACAAGGTGACAACAGT...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAAGGAATTTTCTGCACTaGTCAGGGGATCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: PLHGPQPCLGEAATSLSPRNFLH*SGDPAC
Trigger: GCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCT...TGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp AAGTCCCCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTACGGGGGTCCAGGTATTaGACAGCCAGACCCATGTTC +
Preference number: 4 (lower is better)
Translates to: KSPSFTFPAESRRMLAPLRGSRY*TARPMF
Trigger: GAACATGGGTCTGGCTGTGCAATACCTGGACCCCCG...TAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGGGGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp CATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGGCTTCGGTGCCAATTTGCACGATGCGCTCATaGTGCAAGTTCTTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: HTLASVLCPQTLWASVPICTMRS*CKFFSN
Trigger: GTTGCTAAAGAACTTGCAGCATGAGCGCATCGTGCA...AATTGGCACCGAAGCCCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATGCGCTCATGCTGCAATGCACGATGCGCTCATaGTGCAAGTTCTTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: LSAVPQTAIVLHDALMLQCTMRS*CKFFSN
Trigger: GTTGCTAAAGAACTTGCAGCATGAGCGCATCGTGCA...TTGCAGCATGAGCGCATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR GCA 90 bp CCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCCATAGTACTGCACGATaGGCTCATGCTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PWSTALPGRSSNFTEPSSHSTAR*AHAASS
Trigger: AGAACTTGCAGCATGAGCGCATCGTGCAGTACTATG...GCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CGATGCGCTCATGCTGCAAGTTCTTTAGCAACTGGATCTCGCACTCCAGAGCACATGCCCTCCAGGATCTaGCGCGTGTACTTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: RCAHAASSLATGSRTPEHMPSRI*RVYFRV
Trigger: GACCCGAAAGTACACGCGGCAGATCCTGGAGGGCAT...GTGCTCTGGAGTGCGAGATCCAGTTGCTAAAGAACTTGCAGCATGAGCGCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR GCA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCCATAGCTTCATACTCTaGCCACGGTGGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPHSFIL*PRWFLC
Trigger: ACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATG...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCTCAGTACATGAGCTGTaGAAAGTGGTGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPSVHEL*KVVCEQ
Trigger: CTGCTCACACACCACTTTGCACAGCTCATGTACTGA...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCTGGGGGCTCCCATCAAATAACTATGGCTaGAGGTTCCACAGTTCCACA +
Preference number: 4 (lower is better)
Translates to: HAELRTLELLDLTGWGLPSNNYG*RFHSST
Trigger: TGTGGAACTGTGGAACCTGCAGCCATAGTTATTTGA...TGGGAGCCCCCAGCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR GCA 90 bp GGAAGAACAGAGCTGGCGGTTTTGGACACAGCTGGTGGTAGCATATGGGCTTTCACACTGGCCTGGCTTTaGACTGCAAGCCCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: GRTELAVLDTAGGSIWAFTLAWL*TASPRS
Trigger: TGACCGAGGGCTTGCAGTGCAAAGCCAGGCCAGTGT...GAAAGCCCATATGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTGTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp ACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAGGTTTTTCAGCAGGATaGAGAGCTCATTGTTCATGT +
Preference number: 4 (lower is better)
Translates to: TLAGLPLHGPQPCLGEAAGFSAG*RAHCSC
Trigger: ACATGAACAATGAGCTCTCCATCCTGCTGAAAAACC...TGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CTGTTGTCAGGGAAGCTCTGGGCACGGGACATTCGTGATTTCCGGAAGGATGGGTTGTCAGGGAAGCTCTaGGCACGGGACATTCGTGAT +
Preference number: 4 (lower is better)
Translates to: LLSGKLWARDIRDFRKDGLSGKL*ARDIRD
Trigger: ATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAA...CCCATCCTTCCGGAAATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000585302.1
CDS-3UTR CCA 90 bp TGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTCAAATTGGACCTGCTTaGAAGCAAGTTCACGTCCCG +
Preference number: 4 (lower is better)
Translates to: WAATPWSTALPGRSSNFTQIGPA*KQVHVP
Trigger: CGGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTG...AGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp AGGAGCTACAAGGGAAAGGGGCTGAGACCTCAAGGGGATGGGCGAGGCTGGCTGCTGTCTGGATCAAATTaGACCTGCTTGGAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: RSYKGKGLRPQGDGRGWLLSGSN*TCLEAS
Trigger: ACTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAG...CAGCCAGCCTCGCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGTAGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGAAGTTCTTTAGCAACTaGATCTCGCACTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLKFFSN*ISHSRA
Trigger: TGCTCTGGAGTGCGAGATCCAGTTGCTAAAGAACTT...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp AGGAGCTACAAGGGAAAGGGGCTGAGACCTCAAGGGGATGGGCGAGGCTGGCTGAAGTTCTTTAGCAACTaGATCTCGCACTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RSYKGKGLRPQGDGRGWLKFFSN*ISHSRA
Trigger: TGCTCTGGAGTGCGAGATCCAGTTGCTAAAGAACTT...CAGCCAGCCTCGCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGTAGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCTGGTGGTAGCATATaGGCTTTCCCTTCTACCAGA +
Preference number: 4 (lower is better)
Translates to: PLHGPQPCLGEAATSLSPAGGSI*AFPSTR
Trigger: TCTGGTAGAAGGGAAAGCCCATATGCTACCACCAGC...TGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp TCTCAGGACTGTCTGGATCAAATTGGACCTGCTTGGAAGCAAGTTCACGTCCCGGGCACGGGACATTCGTaGTTTCCGGAAGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: SQDCLDQIGPAWKQVHVPGTGHS*FPEGWA
Trigger: AGCCCATCCTTCCGGAAATCACGAATGTCCCGTGCC...CGGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAGTCCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp GTAGCGCCGGGGGTAGGTTCCACCTTTGACCCCTTTGTCATAAAGCTGAGTTTCGGGTTCTGGGAGCCTTaGCTTCTGTCTCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VAPGVGSTFDPFVIKLSFGFWEP*LLSLFP
Trigger: GGGAAACAGAGACAGAAGTCAAGGCTCCCAGAACCC...GAAACTCAGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACCCCCGGCGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS-3UTR GCA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCGGGGAAATGTTCTTCTaGCATCACTGTAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPGEMFF*HHCSPC
Trigger: ACAAGGACTACAGTGATGGCAGAAGAACATTTCCCC...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp AGGCGCCCACGGGGGTCCAGGTATTGCACAGCCAGACCCATGTTCTCGCCATTTGGATCAAATTGGACCTaGTTGGAAGCAAGTTCACGT +
Preference number: 4 (lower is better)
Translates to: RRPRGSRYCTARPMFSPFGSNWT*LEASSR
Trigger: ACGTGAACTTGCTTCCAAGCAGGTCCAATTTGATCC...AAATGGCGAGAACATGGGTCTGGCTGTGCAATACCTGGACCCCCGTGGGCGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp CATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGGCTTCGGTGCCAATTGGATCAAATTGGACCTaGTTGGAAGCAAGTTCACGT +
Preference number: 4 (lower is better)
Translates to: HTLASVLCPQTLWASVPIGSNWT*LEASSR
Trigger: ACGTGAACTTGCTTCCAAGCAGGTCCAATTTGATCC...AATTGGCACCGAAGCCCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp AGATGGTCAGGGTCTTCTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGAACGATGCGCTCATGCTaGAAGTTCTTTAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: RWSGSSQRGPADSHSTARTMRSC*KFFSNW
Trigger: CCAGTTGCTAAAGAACTTGCAGCATGAGCGCATCGT...TCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAGAAGACCCTGACCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR GCA 90 bp AAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCTCAGTACATGAGCTGTGCAAATGCACGATGCGCTCATaGTGCAAGTTCTTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: KGDRQLCGRESSVHELCKCTMRS*CKFFSN
Trigger: GTTGCTAAAGAACTTGCAGCATGAGCGCATCGTGCA...TTTGCACAGCTCATGTACTGAGCTCTCACGGCCACACAGCTGCCGGTCGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp GATGGTCAGGGTCTTCTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATCATAGTACTGCACGATaGGCTCATGCTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: DGQGLLSAVPQTAIVLHDHSTAR*AHAASS
Trigger: AGAACTTGCAGCATGAGCGCATCGTGCAGTACTATG...ATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAGAAGACCCTGACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR GCA 90 bp CAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTAATGTCCCGCAGGCTCCACACGTCTaGTTTCCTTCCATAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QLYIPSRVSEDVGSLNVPQAPHV*FPSIAL
Trigger: GAGGGCTATGGAAGGAAAGCAGACGTGTGGAGCCTG...CGGGACATTAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp GATGGGCTGTCCAAGGATTGGCAGCTTCCAGACAAGGAATTTTCTGCACTGCTCCTGCTCGCTGGTCTCTaGGATGAACTCCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: DGLSKDWQLPDKEFSALLLLAGL*DELPLT
Trigger: AGTGAGGGGGAGTTCATCCCAGAGACCAGCGAGCAG...GAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS-3UTR CCA 90 bp AGGCGCCCACGGGGGTCCAGGTATTGCACAGCCAGACCCATGTTCTCGCCATTTAAGTTCTTTAGCAACTaGATCTCGCACTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RRPRGSRYCTARPMFSPFKFFSN*ISHSRA
Trigger: TGCTCTGGAGTGCGAGATCCAGTTGCTAAAGAACTT...AAATGGCGAGAACATGGGTCTGGCTGTGCAATACCTGGACCCCCGTGGGCGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp GAGCGCAAAGGCCACAACCTTCAGCTCTTTTCAATGCAGCCTAGGCCCAAGCCCTCAGCTGAAGGTCTCTaGCGAGCCTCCACAAAAATG +
Preference number: 4 (lower is better)
Translates to: ERKGHNLQLFSMQPRPKPSAEGL*RASTKM
Trigger: CATTTTTGTGGAGGCTCGCCAGAGACCTTCAGCTGA...GGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAAGGTTGTGGCCTTTGCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGACACTCTTCATACCCTaGCGTCAGTCTTGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGTLFIP*RQSCAP
Trigger: GGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGT...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GAAAATAACACTCTTCATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGTTCCCTTCTACCAGATaGAGTGGGCTCTGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: ENNTLHTLASVLCPQTLWFPSTR*SGLWPS
Trigger: GCTAGGCCAGAGCCCACTCCATCTGGTAGAAGGGAA...CCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGTTATTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGCAGAGCTGGCGGTTTTaGACACAGCTGGTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGQSWRF*TQLVVA
Trigger: TGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTG...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp TGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTCAGATCGTTCATGATTaGGTTCAATGCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: WAATPWSTALPGRSSNFTQIVHD*VQCLLF
Trigger: GAACAGGAGGCATTGAACTCAATCATGAACGATCTG...AGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp GGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCACTGTTGTCACCTTGTaGTCCACATCTTCATATTTC +
Preference number: 4 (lower is better)
Translates to: GPQPCLGEAATSLSPAAATVVTL*STSSYF
Trigger: GAAATATGAAGATGTGGAGCACAAGGTGACAACAGT...GGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR GCA 90 bp CGCTCTCTGTCAGAGCACCGTAAGCCTTCAACTGGTCTTTCACCGAGCCCCCTGGGGGAAATGTTCTTCTaGCATCACTGTAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RSLSEHRKPSTGLSPSPLGEMFF*HHCSPC
Trigger: ACAAGGACTACAGTGATGGCAGAAGAACATTTCCCC...CAGGGGGCTCGGTGAAAGACCAGTTGAAGGCTTACGGTGCTCTGACAGAGAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp CTCCATGAAGATGGTCAGGGTCTTCTCAGCGCGGTCCCGCAGACAGCCATAGTAGGTGAACAATCATGTTaGTGTGCAGGTAGGACATGC +
Preference number: 4 (lower is better)
Translates to: LHEDGQGLLSAVPQTAIVGEQSC*CAGRTC
Trigger: GCATGTCCTACCTGCACAGCAACATGATTGTTCACC...TACTATGGCTGTCTGCGGGACCGCGCTGAGAAGACCCTGACCATCTTCATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR GCA 90 bp CACAGACACGTGGTAGCGCCGGGGGTAGGTTCCACCTTTGACCCCTTTGTCATACATAGCTTCATACTCTaGCCACGGTGGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: HRHVVAPGVGSTFDPFVIHSFIL*PRWFLC
Trigger: ACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATG...TATGACAAAGGGGTCAAAGGTGGAACCTACCCCCGGCGCTACCACGTGTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp CTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCCACCACAGTGCAGCCCAGGCTGGTTTTTCAGCAGGATaGAGAGCTCATTGTTCATGT +
Preference number: 4 (lower is better)
Translates to: LCPRWFLCQHLHHSAAQAGFSAG*RAHCSC
Trigger: ACATGAACAATGAGCTCTCCATCCTGCTGAAAAACC...AGCCTGGGCTGCACTGTGGTGGAGATGCTGACAGAGAAACCACCGTGGGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp GCTCTCTGTCAGAGCACCGTAAGCCTTCAACTGGTCTTTCACCGAGCCCCCTGGCTGTCTGGATCAAATTaGACCTGCTTGGAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: ALCQSTVSLQLVFHRAPWLSGSN*TCLEAS
Trigger: ACTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAG...CCAGGGGGCTCGGTGAAAGACCAGTTGAAGGCTTACGGTGCTCTGACAGAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR CCA 90 bp CTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAAAGTTCTTTAGCAACTaGATCTCGCACTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LHGPQPCLGEAATSLSPAKFFSN*ISHSRA
Trigger: TGCTCTGGAGTGCGAGATCCAGTTGCTAAAGAACTT...TGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp TCATTCATCTTTGGTAAAGGACAGGACTGGCAGAGCCAACCTGGGACTCTAGGGACTGCTAGCGAGTGCTaGCCTTTCCCTCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SFIFGKGQDWQSQPGTLGTASEC*PFPQAC
Trigger: ACAAGCCTGAGGGAAAGGCCAGCACTCGCTAGCAGT...CCCTAGAGTCCCAGGTTGGCTCTGCCAGTCCTGTCCTTTACCAAAGATGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp AGCTCATCCAGCCCAGAGATGCCCTGGTGGTCTCCAGACATTGGAAGGAAAAACAACTCCCAAGGAAACTaGGTGTTGAGAGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSSSPEMPWWSPDIGRKNNSQGN*VLRGRS
Trigger: GCTCCTCCCTCTCAACACCCAGTTTCCTTGGGAGTT...GTTTTTCCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCTGGATGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp CGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGAGTGCAGGGTTTGTTaGCTTGTCTTCAAATTCATT +
Preference number: 4 (lower is better)
Translates to: RPCRPSPLLLQWGTKAGPECRVC*LVFKFI
Trigger: AATGAATTTGAAGACAAGCCAACAAACCCTGCACTC...TGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACGGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGGAGTGCAGGGTTTGTTaGCTTGTCTTCAAATTCATT +
Preference number: 4 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQEECRVC*LVFKFI
Trigger: AATGAATTTGAAGACAAGCCAACAAACCCTGCACTC...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CCA 90 bp GTAGCGCCGGGGGTAGGTTCCACCTTTGACCCCTTTGTCATAAAGCTGAGTTTCGGGCTGTCCAAGGATTaGCAGCTTCCAGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: VAPGVGSTFDPFVIKLSFGLSKD*QLPDKE
Trigger: TTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCC...GAAACTCAGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACCCCCGGCGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS-3UTR TCA 90 bp CCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTAATGTCCCTGGCATGTACTCCATaGAGATGGTCAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSFTFPAESRRMLAPLMSLACTP*RWSGSS
Trigger: AGAAGACCCTGACCATCTTCATGGAGTACATGCCAG...GGACATTAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR GCA 90 bp GATGGCGGCCATAGCTTCATACTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCTCAGTACATGAGCTGTaGAAAGTGGTGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: DGGHSFILCPRWFLCQHLSVHEL*KVVCEQ
Trigger: CTGCTCACACACCACTTTGCACAGCTCATGTACTGA...GAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATGGCCGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR GCA 90 bp GGAAGAACAGAGCTGGCGGTTTTGGACACAGCTGGTGGTAGCATATGGGCTTTCTTCAGCTCTTTTCAATaGAGCCTAGGCCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GRTELAVLDTAGGSIWAFFSSFQ*SLGPSP
Trigger: TGGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAA...GAAAGCCCATATGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTGTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGTGGCCAACTCTAAGCTaGTTGGAGATGCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGWPTLS*LEMLFP
Trigger: GGGAAACAGCATCTCCAAGCAGCTTAGAGTTGGCCA...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTAATGTCCCGTCTGCCTTGGGAACTTaGTTGTCTCAGGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: QLYIPSRVSEDVGSLNVPSALGT*LSQDCL
Trigger: CAGACAGTCCTGAGACAAGCAAGTTCCCAAGGCAGA...CGGGACATTAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581732.1
CDS-3UTR CCA 90 bp CTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCATGTCTTTGTTCTTCATaGTCTCATATCCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: LHGPQPCLGEAATSLSPACLCSS*SHIQAS
Trigger: GGATGCCTGGATATGAGACCATGAAGAACAAAGACA...TGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp CCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGGTTTTTCAGCAGGATaGAGAGCTCATTGTTCATGT +
Preference number: 4 (lower is better)
Translates to: PLHGPQPCLGEAATSLSPGFSAG*RAHCSC
Trigger: ACATGAACAATGAGCTCTCCATCCTGCTGAAAAACC...TGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp TGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGGTTTTTCAGCAGGATaGAGAGCTCATTGTTCATGT +
Preference number: 4 (lower is better)
Translates to: WAATPWSTALPGRSSNFTGFSAG*RAHCSC
Trigger: ACATGAACAATGAGCTCTCCATCCTGCTGAAAAACC...AGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CCA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGGACCTGTCCAAGGATTaGCAGCTTCCAGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGDLSKD*QLPDKE
Trigger: TTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGGTC...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGAAGAACAGAGCTGGCGGTTTTGGACACAGCTGGTGGTAGCATATGGGCTTTCCAAATTGGACCTGCTTaGAAGCAAGTTCACGTCCCG +
Preference number: 4 (lower is better)
Translates to: GRTELAVLDTAGGSIWAFQIGPA*KQVHVP
Trigger: CGGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTG...GAAAGCCCATATGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTGTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp AGCTCATCCAGCCCAGAGATGCCCTGGTGGTCTCCAGACATTGGAAGGAAAAACAGCTTGTTGTTACTGTaGGGCTGTTCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSSPEMPWWSPDIGRKNSLLLL*GCSEGL
Trigger: CAGCCCTTCTGAACAGCCCCACAGTAACAACAAGCT...GTTTTTCCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCTGGATGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000579585.5
CDS-3UTR TCA 90 bp AGACAAACTCAGCAACAGGATCAGTGCTTAGATCTCTCAAGCTCAGCTCAGGATGGCACGGGACATTCGTaGTTTCCGGAAGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: RQTQQQDQCLDLSSSAQDGTGHS*FPEGWA
Trigger: AGCCCATCCTTCCGGAAATCACGAATGTCCCGTGCC...ATCCTGAGCTGAGCTTGAGAGATCTAAGCACTGATCCTGTTGCTGAGTTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS-3UTR GCA 90 bp CAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTAATGTCCCGACGATGCGCTCATGCTaGAAGTTCTTTAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: QLYIPSRVSEDVGSLNVPTMRSC*KFFSNW
Trigger: CCAGTTGCTAAAGAACTTGCAGCATGAGCGCATCGT...CGGGACATTAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR GCA 90 bp GAAAATAACACTCTTCATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGGGTGAACAATCATGTTaGTGTGCAGGTAGGACATGC +
Preference number: 4 (lower is better)
Translates to: ENNTLHTLASVLCPQTLWGEQSC*CAGRTC
Trigger: GCATGTCCTACCTGCACAGCAACATGATTGTTCACC...CCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGTTATTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GGAAGAACAGAGCTGGCGGTTTTGGACACAGCTGGTGGTAGCATATGGGCTTTCGGTGAACAATCATGTTaGTGTGCAGGTAGGACATGC +
Preference number: 4 (lower is better)
Translates to: GRTELAVLDTAGGSIWAFGEQSC*CAGRTC
Trigger: GCATGTCCTACCTGCACAGCAACATGATTGTTCACC...GAAAGCCCATATGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTGTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CCA 90 bp GGAAGAACAGAGCTGGCGGTTTTGGACACAGCTGGTGGTAGCATATGGGCTTTCGGAGAGGAACTGTTATaGTTTCTGTCCTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: GRTELAVLDTAGGSIWAFGEELL*FLSWDN
Trigger: GTTGTCCCAGGACAGAAACCATAACAGTTCCTCTCC...GAAAGCCCATATGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTGTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
3UTR CAA 72 bp AATGAAAATAACACTCTTCATACCCTGGCGTCAGTCTaGTGCCCCCAGACCCTCTGGGCTTCGGTGCCAATT +
Preference number: 4 (lower is better)
Translates to: NENNTLHTLASV*CPQTLWASVPI
Trigger: AATTGGCACCGAAGCCCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGTTATTTTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GAAAATAACACTCTTCATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGGGATCAAATTGGACCTaGTTGGAAGCAAGTTCACGT +
Preference number: 4 (lower is better)
Translates to: ENNTLHTLASVLCPQTLWGSNWT*LEASSR
Trigger: ACGTGAACTTGCTTCCAAGCAGGTCCAATTTGATCC...CCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGTTATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp CGATGCGCTCATGCTGCAAGTTCTTTAGCAACTGGATCTCGCACTCCAGAGCACGGATCAAATTGGACCTaGTTGGAAGCAAGTTCACGT +
Preference number: 4 (lower is better)
Translates to: RCAHAASSLATGSRTPEHGSNWT*LEASSR
Trigger: ACGTGAACTTGCTTCCAAGCAGGTCCAATTTGATCC...GTGCTCTGGAGTGCGAGATCCAGTTGCTAAAGAACTTGCAGCATGAGCGCATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR GCA 90 bp TCCAAGGATTGGCAGCTTCCAGACAAGGAATTTTCTGCACTGCTCAGGGGATCCCATAGTACTGCACGATaGGCTCATGCTGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SKDWQLPDKEFSALLRGSHSTAR*AHAASS
Trigger: AGAACTTGCAGCATGAGCGCATCGTGCAGTACTATG...GGATCCCCTGAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAATCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp AATCTTGAAGATGGCGGCCATAGCTTCATACTCTGCCCACGGTGGTTTCTCTGTCAAATTGGACCTGCTTaGAAGCAAGTTCACGTCCCG +
Preference number: 4 (lower is better)
Translates to: NLEDGGHSFILCPRWFLCQIGPA*KQVHVP
Trigger: CGGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTG...ACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATGGCCGCCATCTTCAAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp AATCTTGAAGATGGCGGCCATAGCTTCATACTCTGCCCACGGTGGTTTCTCTGTGGTAGGTTCCACCTTTaGCCCCTTTGTCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: NLEDGGHSFILCPRWFLCGRFHL*PLCHKA
Trigger: AGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACC...ACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATGGCCGCCATCTTCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR TCA 90 bp GAAGGATGGGCTGTCCAAGGATTGGCAGCTTCCAGACAAGGAATTTTCTGCACTGGTAGGTTCCACCTTTaGCCCCTTTGTCATAAAGCT +
Preference number: 4 (lower is better)
Translates to: EGWAVQGLAASRQGIFCTGRFHL*PLCHKA
Trigger: AGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACC...AGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCCATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS-3UTR TCA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGTTCTGCCTATTTGAGTaGCCTGTGTCTTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGFCLFE*PVSLFF
Trigger: GAAGAACAAAGACACAGGTCACTCAAATAGGCAGAA...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000579585.5
CDS-3UTR GCA 90 bp GTGATTTCCGGAAGGATGGGCTGTCCAAGGATTGGCAGCTTCCAGACAAGGAATCAGCAACAGGATCAGTaGTTAGATCTCTCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: VISGRMGCPRIGSFQTRNQQQDQ*LDLSSS
Trigger: TGAGCTTGAGAGATCTAAGCACTGATCCTGTTGCTG...ATTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCCATCCTTCCGGAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS-3UTR CCA 90 bp CAGCTTCCAGACAAGGAATTTTCTGCACTGCTCAGGGGATCCAGCATGCACTGCTGTCTTTGTTCTTCATaGTCTCATATCCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: QLPDKEFSALLRGSSMHCCLCSS*SHIQAS
Trigger: GGATGCCTGGATATGAGACCATGAAGAACAAAGACA...GCAGTGCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CCA 90 bp TCATTCATCTTTGGTAAAGGACAGGACTGGCAGAGCCAACCTGGGACTCTAGGGCTGTCTGGATCAAATTaGACCTGCTTGGAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SFIFGKGQDWQSQPGTLGLSGSN*TCLEAS
Trigger: ACTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAG...CCCTAGAGTCCCAGGTTGGCTCTGCCAGTCCTGTCCTTTACCAAAGATGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR GCA 90 bp GGAAGAACAGAGCTGGCGGTTTTGGACACAGCTGGTGGTAGCATATGGGCTTTCACTGTTGTCACCTTGTaGTCCACATCTTCATATTTC +
Preference number: 4 (lower is better)
Translates to: GRTELAVLDTAGGSIWAFTVVTL*STSSYF
Trigger: GAAATATGAAGATGTGGAGCACAAGGTGACAACAGT...GAAAGCCCATATGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTGTTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR TCA 90 bp GTGATTTCCGGAAGGATGGGCTGTCCAAGGATTGGCAGCTTCCAGACAAGGAATGAGGACACTTCAATTTaGAGCAATTCTACTGACAGA +
Preference number: 4 (lower is better)
Translates to: VISGRMGCPRIGSFQTRNEDTSI*SNSTDR
Trigger: TCTGTCAGTAGAATTGCTTCAAATTGAAGTGTCCTC...ATTCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCCATCCTTCCGGAAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS-3UTR CCA 90 bp TGCAAACAGACAAACTCAGCAACAGGATCAGTGCTTAGATCTCTCAAGCTCAGCTTACCAGTACTTGCCTaGATTCCAGAAGTTACTCAG +
Preference number: 4 (lower is better)
Translates to: CKQTNSATGSVLRSLKLSLPVLA*IPEVTQ
Trigger: CTGAGTAACTTCTGGAATCCAGGCAAGTACTGGTAA...GCTGAGCTTGAGAGATCTAAGCACTGATCCTGTTGCTGAGTTTGTCTGTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585302.1
3UTR CAA 72 bp TCATGTAATGTAGATCAAGAGGTTGTCCAAATACTGTaGTCACCTTGTGCTCCACATCTTCATATTTCACAG +
Preference number: 4 (lower is better)
Translates to: SCNVDQEVVQIL*SPCAPHLHISQ
Trigger: CTGTGAAATATGAAGATGTGGAGCACAAGGTGACAACAGTATTTGGACAACCTCTTGATCTACATTACATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTTTTCCCCGGCGCCAGTaGATGGGGGCACTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRFPRRQ*MGALGD
Trigger: GTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAAA...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGTTTCCCCGGCGCCAGTaGATGGGGGCACTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVFPRRQ*MGALGD
Trigger: GTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAAA...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGACCCTGGCGTCAGTCTaGTGCCCCCAGACCCTCTGG +
Preference number: 5 (lower is better)
Translates to: AAAPCHAAKGDRQLCGRETLASV*CPQTLW
Trigger: CCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGT...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGGCGGACTGGGAAGCCTaGATCCGCACCTGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVADWEA*IRTCLD
Trigger: GTCCAGACAGGTGCGGATCAAGGCTTCCCAGTCCGC...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CCCCTACCCCTCCACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCGGGCCCACGGCTGCCTaGCACACTGTTCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PLPLHAELRTLELLDLTGGPTAA*HTVPSP
Trigger: GGGGCTGGGAACAGTGTGCAAGGCAGCCGTGGGCCC...GCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTGGAGGGGTAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCAGGGCCCACGGCTGCCTaGCACACTGTTCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPGPTAA*HTVPSP
Trigger: GGGGCTGGGAACAGTGTGCAAGGCAGCCGTGGGCCC...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCGCCTTTCCCTCAGGCTaGTGGGAGCTCATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: AAPCHAAKGDRQLCGRESAFPSG*WELIQP
Trigger: GGGCTGGATGAGCTCCCACAAGCCTGAGGGAAAGGC...GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGACCTGGGACGCACAGTaGAGTCAGCCAGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWTWDAQ*SQPAPC
Trigger: GCACGGTGCTGGCTGACTCAACTGTGCGTCCCAGGT...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CAA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGGGGGCACTGGGAGACTaGGTTGGCACATTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWGALGD*VGTFLS
Trigger: GGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCCC...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGGGGCACTGGGAGACTaGGTTGGCACATTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRGALGD*VGTFLS
Trigger: GGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCCC...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCGGGGCACTGGGAGACTaGGTTGGCACATTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: AEGAQTDAGWAATPWSTAGALGD*VGTFLS
Trigger: GGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCCC...GGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCTGCCGCTCAGGAACATAGCCAGGGGGAGGTGAGCTTCGGCCAGGGTTCTGGGTTTCCCCGGCGCCAGTaGATGGGGGCACTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: AAAQEHSQGEVSFGQGSGFPRRQ*MGALGD
Trigger: GTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAAA...CCCAGAACCCTGGCCGAAGCTCACCTCCCCCTGGCTATGTTCCTGAGCGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp CGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGTTTCCCCGGCGCCAGTaGATGGGGGCACTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RRWLGCHSMVHSLAWEKQFPRRQ*MGALGD
Trigger: GTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAAA...CTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS CCA 90 bp AGTTCAATGCCTCCTGTTCGTCCATGGTGGCGATGGCGGCGGCGGTaGCTAAGGTCCGTGAGTGTCACCTCCGCAGCCGGGGCTGCATGC +
Preference number: 5 (lower is better)
Translates to: SSMPPVRPWWRWRRR*LRSVSVTSAAGAAC
Trigger: GCATGCAGCCCCGGCTGCGGAGGTGACACTCACGGACCTTAGCCACCGCCGCCGCCATCGCCACCATGGACGAACAGGAGGCATTGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000584573.5
CDS-3UTR CAA 90 bp CACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGCGGACTGGGAAGCCTaGATCCGCACCTGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: HRPTLAGLPLHGPQPCLGADWEA*IRTCLD
Trigger: GTCCAGACAGGTGCGGATCAAGGCTTCCCAGTCCGC...TCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp AAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCGCGGACTGGGAAGCCTaGATCCGCACCTGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: KGHRPTLAGLPLHGPQPCADWEA*IRTCLD
Trigger: GTCCAGACAGGTGCGGATCAAGGCTTCCCAGTCCGC...GCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTACGGGGGTCCAGGTATaGCACAGCCAGACCCATGTT +
Preference number: 5 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRTGVQV*HSQTHV
Trigger: AACATGGGTCTGGCTGTGCAATACCTGGACCCCCGT...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCTTTCCCCGGCGCCAGTaGATGGGGGCACTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCFPRRQ*MGALGD
Trigger: GTCTCCCAGTGCCCCCATCAACTGGCGCCGGGGAAA...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGGAGTCTCGGAGGATGTaGGCTCCCTTAATGTCCCGG +
Preference number: 5 (lower is better)
Translates to: QQQPPAMQQRATGSCVAVESRRM*APLMSR
Trigger: CCGGGACATTAAGGGAGCCAACATCCTCCGAGACTC...CACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGGGCTGGGTGGCAATCTaGAAGATGGCGGCCATAGCT +
Preference number: 5 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREGWVAI*KMAAIA
Trigger: AGCTATGGCCGCCATCTTCAAGATTGCCACCCAGCC...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCGGCTGGGTGGCAATCTaGAAGATGGCGGCCATAGCT +
Preference number: 5 (lower is better)
Translates to: AAPCHAAKGDRQLCGRESGWVAI*KMAAIA
Trigger: AGCTATGGCCGCCATCTTCAAGATTGCCACCCAGCC...GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCTCCTGGATCTGACAGGCTGGGGGCTCCCAGTCCTGAGGCTGCAGCCACCCCACCATGGTCCACAGCCTaGCCTGGGAGAAGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: APGSDRLGAPSPEAAATPPWSTA*PGRSSN
Trigger: GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGG...TGGGGTGGCTGCAGCCTCAGGACTGGGAGCCCCCAGCCTGTCAGATCCAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGGCTTCGGTGCCAATTGGGCCCACGGCTGCCTaGCACACTGTTCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: HTLASVLCPQTLWASVPIGPTAA*HTVPSP
Trigger: GGGGCTGGGAACAGTGTGCAAGGCAGCCGTGGGCCC...AATTGGCACCGAAGCCCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CCCCTACCCCTCCACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCACCCTGGCGTCAGTCTaGTGCCCCCAGACCCTCTGG +
Preference number: 5 (lower is better)
Translates to: PLPLHAELRTLELLDLTGTLASV*CPQTLW
Trigger: CCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGT...GCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTGGAGGGGTAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GCTTCGGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCACCTGGGACGCACAGTaGAGTCAGCCAGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: ASVPIAVSGHIPEGGAHGTWDAQ*SQPAPC
Trigger: GCACGGTGCTGGCTGACTCAACTGTGCGTCCCAGGT...GCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACCGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CAA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCGGTGAACAAGTTGCCTaGATGACGCCGTATTCGGGG +
Preference number: 5 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGGEQVA*MTPYSG
Trigger: CCCCGAATACGGCGTCATCAAGGCAACTTGTTCACC...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCTTCGGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCCCATGTTCTCGCCATTaGTGCTCAGGGAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: ASVPIAVSGHIPEGGAHGPCSRH*CSGSGW
Trigger: CCAGCCGCTCCCTGAGCACAAATGGCGAGAACATGG...GCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GGACACATCCCCGAGGGTGGGGCCCACGGCTGCCTTGCACACTGTTCCCAGCCCCACTGGGAGACTTGGTaGGCACATTCCTCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: GHIPEGGAHGCLAHCSQPHWETW*AHSSPA
Trigger: TGCAGGAGAGGAATGTGCCAACCAAGTCTCCCAGTG...GGGCTGGGAACAGTGTGCAAGGCAGCCGTGGGCCCCACCCTCGGGGATGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GTGGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGAGTCTCGGAGGATGTaGGCTCCCTTAATGTCCCGG +
Preference number: 5 (lower is better)
Translates to: VAEGAQTDAGWAATPWSTESRRM*APLMSR
Trigger: CCGGGACATTAAGGGAGCCAACATCCTCCGAGACTC...TGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGGCTGGGTGGCAATCTaGAAGATGGCGGCCATAGCT +
Preference number: 5 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRGWVAI*KMAAIA
Trigger: AGCTATGGCCGCCATCTTCAAGATTGCCACCCAGCC...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGTGGGCTGTCCAAGGATaGGCAGCTTCCAGACAAGGA +
Preference number: 5 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWWAVQG*AASRQG
Trigger: TCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCCA...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577395.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGCCGTTGTGCTCGAACTaGATTCTGACGTCACTCTGC +
Preference number: 5 (lower is better)
Translates to: AAAPCHAAKGDRQLCGREPLCSN*ILTSLC
Trigger: GCAGAGTGACGTCAGAATCAAGTTCGAGCACAACGG...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361733.8
ENST00000577395.5
CDS-3UTR CAA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGGCGGACTGGGAAGCCTaGATCCGCACCTGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLADWEA*IRTCLD
Trigger: GTCCAGACAGGTGCGGATCAAGGCTTCCCAGTCCGC...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCGAGTATTCCTGTCTGTaGTCAGGGAAGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSEYSCL*SGKLWA
Trigger: TGCCCAGAGCTTCCCTGACAACAGACAGGAATACTC...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACCCATGTTCTCGCCATTaGTGCTCAGGGAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: AGWAATPWSTALPGRSSNPCSRH*CSGSGW
Trigger: CCAGCCGCTCCCTGAGCACAAATGGCGAGAACATGG...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGACGGGGGTCCAGGTATaGCACAGCCAGACCCATGTT +
Preference number: 5 (lower is better)
Translates to: RRWLGCHSMVHSLAWEKQTGVQV*HSQTHV
Trigger: AACATGGGTCTGGCTGTGCAATACCTGGACCCCCGT...CTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp AAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCACGGGGGTCCAGGTATaGCACAGCCAGACCCATGTT +
Preference number: 5 (lower is better)
Translates to: KGHRPTLAGLPLHGPQPCTGVQV*HSQTHV
Trigger: AACATGGGTCTGGCTGTGCAATACCTGGACCCCCGT...GCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAAGGGGCACTGGGAGACTaGGTTGGCACATTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQGALGD*VGTFLS
Trigger: GGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCCC...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTAGAGCACTCACCTCCTaGCTTGTCTCAGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRRALTS*LVSGLS
Trigger: AGACAGTCCTGAGACAAGCAAGGAGGTGAGTGCTCT...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp ACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGGAGTCTCGGAGGATGTaGGCTCCCTTAATGTCCCGG +
Preference number: 5 (lower is better)
Translates to: TDRRWLGCHSMVHSLAWEESRRM*APLMSR
Trigger: CCGGGACATTAAGGGAGCCAACATCCTCCGAGACTC...CTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACCCATGGTCCACAGCCTaGCCTGGGAGAAGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: AGWAATPWSTALPGRSSNPWSTA*PGRSSN
Trigger: GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGG...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCACCCTGGCGTCAGTCTaGTGCCCCCAGACCCTCTGG +
Preference number: 5 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPTLASV*CPQTLW
Trigger: CCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGT...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCCTGCACATGAGCTTGTaGTTACTGTGGGGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: AQQQPPAMQQRATGSCVALHMSL*LLWGCS
Trigger: TGAACAGCCCCACAGTAACAACAAGCTCATGTGCAG...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS GCA 90 bp CTAGCCAGGGACAGCTCCTCACACTTGGTTGGCACATTCCTCTCCTaGACAGAGAGGGCATTCTCGCTGTCCGCACTCCGCAGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: LARDSSSHLVGTFLS*TERAFSLSALRRRP
Trigger: TGGGCGCCTGCGGAGTGCGGACAGCGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCCAACCAAGTGTGAGGAGCTGTCCCTGGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577839.1
CDS-3UTR CAA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGGTGAACAAGTTGCCTaGATGACGCCGTATTCGGGG +
Preference number: 5 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLGEQVA*MTPYSG
Trigger: CCCCGAATACGGCGTCATCAAGGCAACTTGTTCACC...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGGGTGAACAAGTTGCCTaGATGACGCCGTATTCGGGG +
Preference number: 5 (lower is better)
Translates to: EGAQTDAGWAATPWSTALGEQVA*MTPYSG
Trigger: CCCCGAATACGGCGTCATCAAGGCAACTTGTTCACC...CAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATGTTCTCGCCATTaGTGCTCAGGGAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLPCSRH*CSGSGW
Trigger: CCAGCCGCTCCCTGAGCACAAATGGCGAGAACATGG...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATCCATGTTCTCGCCATTaGTGCTCAGGGAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHPCSRH*CSGSGW
Trigger: CCAGCCGCTCCCTGAGCACAAATGGCGAGAACATGG...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp AGGAGCTACAAGGGAAAGGGGCTGAGACCTCAAGGGGATGGGCGAGGCTGGCTGGGGGCACTGGGAGACTaGGTTGGCACATTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RSYKGKGLRPQGDGRGWLGALGD*VGTFLS
Trigger: GGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCCC...CAGCCAGCCTCGCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGTAGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGTCAAATTGGACCTGCTaGGAAGCAAGTTCACGTCCC +
Preference number: 5 (lower is better)
Translates to: AAAPCHAAKGDRQLCGRESNWTC*EASSRP
Trigger: GGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTGA...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CTCCTGCACAGAGAGGGCATTCTCGCTGTCCGCACTCCGCAGGCGCCCACGGGGTCAAATTGGACCTGCTaGGAAGCAAGTTCACGTCCC +
Preference number: 5 (lower is better)
Translates to: LLHREGILAVRTPQAPTGSNWTC*EASSRP
Trigger: GGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTGA...CCCCGTGGGCGCCTGCGGAGTGCGGACAGCGAGAATGCCCTCTCTGTGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp GAGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGTCAAATTGGACCTGCTaGGAAGCAAGTTCACGTCCC +
Preference number: 5 (lower is better)
Translates to: EPSSSPLPCSKGRPAAVWSNWTC*EASSRP
Trigger: GGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTGA...CCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCAGAGTCTCGGAGGATGTaGGCTCCCTTAATGTCCCGG +
Preference number: 5 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPESRRM*APLMSR
Trigger: CCGGGACATTAAGGGAGCCAACATCCTCCGAGACTC...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCGGGCTTCGGTGCCAATaGCAGTGTCAGGACACATCC +
Preference number: 5 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCGLRCQ*QCQDTS
Trigger: GGATGTGTCCTGACACTGCAATTGGCACCGAAGCCC...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp TGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCGCCTTTCCCTCAGGCTaGTGGGAGCTCATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: WSTALPGRSSNFTEPSSSAFPSG*WELIQP
Trigger: GGGCTGGATGAGCTCCCACAAGCCTGAGGGAAAGGC...GCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTCCCCTGCACATGAGCTaGTTGTTACTGTGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLPLHMS*LLLWGC
Trigger: ACAGCCCCACAGTAACAACAAGCTCATGTGCAGGGG...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGCGTCACTCTGCCTATTaGAGTGACCTGTGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: AAAPCHAAKGDRQLCGRERHSAY*SDLCLC
Trigger: ACAAAGACACAGGTCACTCAAATAGGCAGAGTGACG...CTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361733.8
ENST00000577395.5
CDS-3UTR CAA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGGTTGTCCAAATACTGTaGTCACCTTGTGCTCCACAT +
Preference number: 5 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPVVQIL*SPCAPH
Trigger: ATGTGGAGCACAAGGTGACAACAGTATTTGGACAAC...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTTGTCCAAATACTGTaGTCACCTTGTGCTCCACAT +
Preference number: 5 (lower is better)
Translates to: AQQQPPAMQQRATGSCVAVVQIL*SPCAPH
Trigger: ATGTGGAGCACAAGGTGACAACAGTATTTGGACAAC...GGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGCCATGTTCTCGCCATTaGTGCTCAGGGAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: GLPLHGPQPCLGEAATSLPCSRH*CSGSGW
Trigger: CCAGCCGCTCCCTGAGCACAAATGGCGAGAACATGG...CAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGACGGGGGTCCAGGTATaGCACAGCCAGACCCATGTT +
Preference number: 5 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLTGVQV*HSQTHV
Trigger: AACATGGGTCTGGCTGTGCAATACCTGGACCCCCGT...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACCACTGGGAGACTTGGTaGGCACATTCCTCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: AGWAATPWSTALPGRSSNHWETW*AHSSPA
Trigger: TGCAGGAGAGGAATGTGCCAACCAAGTCTCCCAGTG...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp AGCCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCACTGTCTGGATCAAATaGGACCTGCTTGGAAGCAAG +
Preference number: 5 (lower is better)
Translates to: SPAAAPCHAAKGDRQLCGTVWIK*DLLGSK
Trigger: CTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAGT...GCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATGGCTGGGTGGCAATCTaGAAGATGGCGGCCATAGCT +
Preference number: 5 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHGWVAI*KMAAIA
Trigger: AGCTATGGCCGCCATCTTCAAGATTGCCACCCAGCC...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCCCATGGTCCACAGCCTaGCCTGGGAGAAGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: PWSTALPGRSSNFTEPSSPWSTA*PGRSSN
Trigger: GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGG...GCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGACCAACTCTAAGCTGCTaGGAGATGCTGTTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRPTLSC*EMLFPQ
Trigger: TTGGGGAAACAGCATCTCCAAGCAGCTTAGAGTTGG...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGCTGCACATGAGCTTGTaGTTACTGTGGGGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: GTDRRWLGCHSMVHSLAWLHMSL*LLWGCS
Trigger: TGAACAGCCCCACAGTAACAACAAGCTCATGTGCAG...CCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTCCGTTGTGCTCGAACTaGATTCTGACGTCACTCAAA +
Preference number: 5 (lower is better)
Translates to: PAAAPCHAAKGDRQLCGRPLCSN*ILTSLK
Trigger: TTTGAGTGACGTCAGAATCAAGTTCGAGCACAACGG...ACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCCCGTTGTGCTCGAACTaGATTCTGACGTCACTCAAA +
Preference number: 5 (lower is better)
Translates to: AAPCHAAKGDRQLCGRESPLCSN*ILTSLK
Trigger: TTTGAGTGACGTCAGAATCAAGTTCGAGCACAACGG...GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCTGGGCTGTCCAAGGATaGGCAGCTTCCAGACAAGGA +
Preference number: 5 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCWAVQG*AASRQG
Trigger: TCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCCA...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577395.5
ENST00000584573.5
CDS TCA 90 bp CCGGTGACGTCGGTTCATCTGGAGGGCCACCAGATCGTTCATGATTaGGTTCAATGCCTCCTGTTCGTCCATGGTGGCGATGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: PVTSVHLEGHQIVHD*VQCLLFVHGGDGGG
Trigger: GCCGCCGCCATCGCCACCATGGACGAACAGGAGGCATTGAACTCAATCATGAACGATCTGGTGGCCCTCCAGATGAACCGACGTCACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACCCGTTGTGCTCGAACTaGATTCTGACGTCACTCTGC +
Preference number: 5 (lower is better)
Translates to: AGWAATPWSTALPGRSSNPLCSN*ILTSLC
Trigger: GCAGAGTGACGTCAGAATCAAGTTCGAGCACAACGG...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361733.8
CDS-3UTR CAA 90 bp CCCCTACCCCTCCACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCATTCGCCTCTCCCCGTaGTGCTCGAACTTGATTCTG +
Preference number: 5 (lower is better)
Translates to: PLPLHAELRTLELLDLTGIRLSP*CSNLIL
Trigger: CAGAATCAAGTTCGAGCACAACGGGGAGAGGCGAAT...GCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTGGAGGGGTAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CATACTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCCACCACAGTGCAGCCCAGCGGACTGGGAAGCCTaGATCCGCACCTGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: HTLPTVVSLSASPPQCSPADWEA*IRTCLD
Trigger: GTCCAGACAGGTGCGGATCAAGGCTTCCCAGTCCGC...TGGGCTGCACTGTGGTGGAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCAGAGTATTCCTGTCTGTaGTCAGGGAAGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPEYSCL*SGKLWA
Trigger: TGCCCAGAGCTTCCCTGACAACAGACAGGAATACTC...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCGGTGAACAAGTTGCCTaGATGACGCCGTATTCGGGG +
Preference number: 5 (lower is better)
Translates to: GPQPCLGEAATSLSPAAAGEQVA*MTPYSG
Trigger: CCCCGAATACGGCGTCATCAAGGCAACTTGTTCACC...GGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGGGTGAACAAGTTGCCTaGATGACGCCGTATTCGGGG +
Preference number: 5 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLGEQVA*MTPYSG
Trigger: CCCCGAATACGGCGTCATCAAGGCAACTTGTTCACC...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp TGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCCTCACTGGGAGACTTGGTaGGCACATTCCTCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: WSGLWPSRSRLRQPETPPHWETW*AHSSPA
Trigger: TGCAGGAGAGGAATGTGCCAACCAAGTCTCCCAGTG...AGGAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATCACTGGGAGACTTGGTaGGCACATTCCTCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHHWETW*AHSSPA
Trigger: TGCAGGAGAGGAATGTGCCAACCAAGTCTCCCAGTG...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GATGGTCAGGGTCTTCTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATGGGGCACTGGGAGACTaGGTTGGCACATTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: DGQGLLSAVPQTAIVLHDGALGD*VGTFLS
Trigger: GGAGAGGAATGTGCCAACCAAGTCTCCCAGTGCCCC...ATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAGAAGACCCTGACCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp GGGTCAGTGGTCGCCTCAGCTCTCAGGGCCCTAGTTCTGCCCGCCTGGGTTCAGTCAAATTGGACCTGCTaGGAAGCAAGTTCACGTCCC +
Preference number: 5 (lower is better)
Translates to: GSVVASALRALVLPAWVQSNWTC*EASSRP
Trigger: GGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTGA...CTGAACCCAGGCGGGCAGAACTAGGGCCCTGAGAGCTGAGGCGACCACTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581732.1
CDS-3UTR CAA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACAGAGCACTCACCTCCTaGCTTGTCTCAGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: AGWAATPWSTALPGRSSNRALTS*LVSGLS
Trigger: AGACAGTCCTGAGACAAGCAAGGAGGTGAGTGCTCT...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp TGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCGAGTCTCGGAGGATGTaGGCTCCCTTAATGTCCCGG +
Preference number: 5 (lower is better)
Translates to: WSTALPGRSSNFTEPSSSESRRM*APLMSR
Trigger: CCGGGACATTAAGGGAGCCAACATCCTCCGAGACTC...GCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CTTCTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATGCGCTCATGCTGGGCTGGGTGGCAATCTaGAAGATGGCGGCCATAGCT +
Preference number: 5 (lower is better)
Translates to: LLSAVPQTAIVLHDALMLGWVAI*KMAAIA
Trigger: AGCTATGGCCGCCATCTTCAAGATTGCCACCCAGCC...CAGCATGAGCGCATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp TGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCGGGCTTCGGTGCCAATaGCAGTGTCAGGACACATCC +
Preference number: 5 (lower is better)
Translates to: WSTALPGRSSNFTEPSSSGLRCQ*QCQDTS
Trigger: GGATGTGTCCTGACACTGCAATTGGCACCGAAGCCC...GCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GCTTCGGTGCCAATTGCAGTGTCAGGACACATCCCCGAGGGTGGGGCCCACGGCCCAACTCTAAGCTGCTaGGAGATGCTGTTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: ASVPIAVSGHIPEGGAHGPTLSC*EMLFPQ
Trigger: TTGGGGAAACAGCATCTCCAAGCAGCTTAGAGTTGG...GCCGTGGGCCCCACCCTCGGGGATGTGTCCTGACACTGCAATTGGCACCGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCAATAGGCACATTTaGGAGGGGAGGGGCCGGAAG +
Preference number: 5 (lower is better)
Translates to: GLPLHGPQPCLGEAATSLSNRHI*EGRGRK
Trigger: CTTCCGGCCCCTCCCCTCCAAAATGTGCCTATTGCT...CAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGTTTCTCTTCTCTCTCTaGAGGCGTCCGTCACCTGTA +
Preference number: 5 (lower is better)
Translates to: RRWLGCHSMVHSLAWEKQFLFSL*RRPSPV
Trigger: TACAGGTGACGGACGCCTCAAGAGAGAGAAGAGAAA...CTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CAA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCGGAGTGCAGGGTTTGTaGGCTTGTCTTCAAATTCAT +
Preference number: 5 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSGVQGL*ACLQIH
Trigger: ATGAATTTGAAGACAAGCCAACAAACCCTGCACTCC...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CAA 90 bp GGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGCCGTTGTGCTCGAACTaGATTCTGACGTCACTCAAA +
Preference number: 5 (lower is better)
Translates to: GTDRRWLGCHSMVHSLAWPLCSN*ILTSLK
Trigger: TTTGAGTGACGTCAGAATCAAGTTCGAGCACAACGG...CCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GATGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCGAGTATTCCTGTCTGTaGTCAGGGAAGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: DGVGSGLAGHDSGSLRHLEYSCL*SGKLWA
Trigger: TGCCCAGAGCTTCCCTGACAACAGACAGGAATACTC...GAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CCCCTACCCCTCCACGCTGAGCTCAGGACACTGGAGCTCCTGGATCTGACAGGCTCAAATTGGACCTGCTaGGAAGCAAGTTCACGTCCC +
Preference number: 5 (lower is better)
Translates to: PLPLHAELRTLELLDLTGSNWTC*EASSRP
Trigger: GGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTGA...GCCTGTCAGATCCAGGAGCTCCAGTGTCCTGAGCTCAGCGTGGAGGGGTAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATAGAGCACTCACCTCCTaGCTTGTCTCAGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHRALTS*LVSGLS
Trigger: AGACAGTCCTGAGACAAGCAAGGAGGTGAGTGCTCT...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp AGATGGTCAGGGTCTTCTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGAGAGTCTCGGAGGATGTaGGCTCCCTTAATGTCCCGG +
Preference number: 5 (lower is better)
Translates to: RWSGSSQRGPADSHSTARESRRM*APLMSR
Trigger: CCGGGACATTAAGGGAGCCAACATCCTCCGAGACTC...TCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAGAAGACCCTGACCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR CAA 90 bp CCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGGCTGGGTGGCAATCTaGAAGATGGCGGCCATAGCT +
Preference number: 5 (lower is better)
Translates to: PLHGPQPCLGEAATSLSPGWVAI*KMAAIA
Trigger: AGCTATGGCCGCCATCTTCAAGATTGCCACCCAGCC...TGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGGGCTTCGGTGCCAATaGCAGTGTCAGGACACATCC +
Preference number: 5 (lower is better)
Translates to: LHGPQPCLGEAATSLSPAGLRCQ*QCQDTS
Trigger: GGATGTGTCCTGACACTGCAATTGGCACCGAAGCCC...TGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAACAGAGCTGGCGGTTTaGGACACAGCTGGTGGTAGC +
Preference number: 5 (lower is better)
Translates to: PLHGPQPCLGEAATSLSPTELAV*DTAGGS
Trigger: GCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTGT...TGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAAGCAATAGGCACATTTaGGAGGGGAGGGGCCGGAAG +
Preference number: 5 (lower is better)
Translates to: LHGPQPCLGEAATSLSPASNRHI*EGRGRK
Trigger: CTTCCGGCCCCTCCCCTCCAAAATGTGCCTATTGCT...TGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCACTGCACATGAGCTTGTaGTTACTGTGGGGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPLHMSL*LLWGCS
Trigger: TGAACAGCCCCACAGTAACAACAAGCTCATGTGCAG...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp TGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCACATGAGCTaGTTGTTACTGTGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: WSTALPGRSSNFTEPSSSPLHMS*LLLWGC
Trigger: ACAGCCCCACAGTAACAACAAGCTCATGTGCAGGGG...GCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CAATGTGCTGCTGCCGCTCAGGAACATAGCCAGGGGGAGGTGAGCTTCGGCCAGAGGGTTCTGGGAGCCTaGACTTCTGTCTCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: QCAAAAQEHSQGEVSFGQRVLGA*TSVSVS
Trigger: GGAAACAGAGACAGAAGTCAAGGCTCCCAGAACCCT...CTGGCCGAAGCTCACCTCCCCCTGGCTATGTTCCTGAGCGGCAGCAGCACATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS TCA 90 bp GCATCCGGTGACGTCGGTTCATCTGGAGGGCCACCAGATCGTTCATaGTTGAGTTCAATGCCTCCTGTTCGTCCATGGTGGCGATGGCGG +
Preference number: 5 (lower is better)
Translates to: ASGDVGSSGGPPDRS*LSSMPPVRPWWRWR
Trigger: CCGCCATCGCCACCATGGACGAACAGGAGGCATTGAACTCAATCATGAACGATCTGGTGGCCCTCCAGATGAACCGACGTCACCGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS GCA 90 bp CTTGATGACGCCGTATTCGGGGAAATGTTCTTCTGCCTGAAAGGGTaGAAGGGCCAGAGGAGAGCAAGTCACACCCCAGGCTACGAGGCG +
Preference number: 5 (lower is better)
Translates to: LDDAVFGEMFFCLKG*KGQRRASHTPGYEA
Trigger: CGCCTCGTAGCCTGGGGTGTGACTTGCTCTCCTCTGGCCCTTGCACCCTTTCAGGCAGAAGAACATTTCCCCGAATACGGCGTCATCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577784.1
CDS-3UTR CAA 90 bp CCCAGCAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTTTATCAAGATCATCTaGGTTTTTCAGCAGGATGGA +
Preference number: 5 (lower is better)
Translates to: PSSSPLPCSKGRPAAVWPFIKII*VFQQDG
Trigger: TCCATCCTGCTGAAAAACCAAGATGATCTTGATAAA...CGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp TGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCGAGTATTCCTGTCTGTaGTCAGGGAAGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: WSTALPGRSSNFTEPSSSEYSCL*SGKLWA
Trigger: TGCCCAGAGCTTCCCTGACAACAGACAGGAATACTC...GCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GATGGTCAGGGTCTTCTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATGGTGAACAAGTTGCCTaGATGACGCCGTATTCGGGG +
Preference number: 5 (lower is better)
Translates to: DGQGLLSAVPQTAIVLHDGEQVA*MTPYSG
Trigger: CCCCGAATACGGCGTCATCAAGGCAACTTGTTCACC...ATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAGAAGACCCTGACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp GGCCCCAAAGTCCCCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCCACTGGGAGACTTGGTaGGCACATTCCTCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: GPKVPQLYIPSRVSEDVGHWETW*AHSSPA
Trigger: TGCAGGAGAGGAATGTGCCAACCAAGTCTCCCAGTG...GCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGGGGACTTTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp ACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGTCAAATTGGACCTGCTaGGAAGCAAGTTCACGTCCC +
Preference number: 5 (lower is better)
Translates to: TALPGRSSNFTEPSSSPLSNWTC*EASSRP
Trigger: GGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTGA...CAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCAACTGTCTGGATCAAATaGGACCTGCTTGGAAGCAAG +
Preference number: 5 (lower is better)
Translates to: ALPGRSSNFTEPSSSPLPTVWIK*DLLGSK
Trigger: CTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAGT...TGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAAACTGTCTGGATCAAATaGGACCTGCTTGGAAGCAAG +
Preference number: 5 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQTVWIK*DLLGSK
Trigger: CTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAGT...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGGCCTTTCCCTCAGGCTaGTGGGAGCTCATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGAFPSG*WELIQP
Trigger: GGGCTGGATGAGCTCCCACAAGCCTGAGGGAAAGGC...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GAGCGCAAAGGCCACAACCTTCAGCTCTTTTCAATGCAGCCTAGGCCCAAGCCCAGCAATAGGCACATTTaGGAGGGGAGGGGCCGGAAG +
Preference number: 5 (lower is better)
Translates to: ERKGHNLQLFSMQPRPKPSNRHI*EGRGRK
Trigger: CTTCCGGCCCCTCCCCTCCAAAATGTGCCTATTGCT...GGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAAGGTTGTGGCCTTTGCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp TGGAGTGGGCTCTGGCCTAGCAGGTCACGACTCAGGCAGCCTGAGACACCTCCTCATACAACGAAGGCTTaGGCTTGTTCTGTGCCCATG +
Preference number: 5 (lower is better)
Translates to: WSGLWPSRSRLRQPETPPHTTKA*ACSVPM
Trigger: CATGGGCACAGAACAAGCCAAAGCCTTCGTTGTATG...AGGAGGTGTCTCAGGCTGCCTGAGTCGTGACCTGCTAGGCCAGAGCCCACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CAA 90 bp GGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCTTTCTCTTCTCTCTCTaGAGGCGTCCGTCACCTGTA +
Preference number: 5 (lower is better)
Translates to: GPQPCLGEAATSLSPAAAFLFSL*RRPSPV
Trigger: TACAGGTGACGGACGCCTCAAGAGAGAGAAGAGAAA...GGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CAA 90 bp GCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCGCAGGGTTTGTTGGCTaGTCTTCAAATTCATTTTCA +
Preference number: 5 (lower is better)
Translates to: AAPCHAAKGDRQLCGRESAGFVG*SSNSFS
Trigger: TGAAAATGAATTTGAAGACAAGCCAACAAACCCTGC...GCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CAA 90 bp GGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGGAGTGCAGGGTTTGTaGGCTTGTCTTCAAATTCAT +
Preference number: 5 (lower is better)
Translates to: GRGTDRRWLGCHSMVHSLGVQGL*ACLQIH
Trigger: ATGAATTTGAAGACAAGCCAACAAACCCTGCACTCC...AAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS TCA 90 bp GCAAGTCACACCCCAGGCTACGAGGCGGAACGTACAAACCAGGTCTaGGACACCCCGGGCTACAAGGCGGAATATACAAACCAGGTCTCA +
Preference number: 5 (lower is better)
Translates to: ASHTPGYEAERTNQV*DTPGYKAEYTNQVS
Trigger: TGAGACCTGGTTTGTATATTCCGCCTTGTAGCCCGGGGTGTCTCAGACCTGGTTTGTACGTTCCGCCTCGTAGCCTGGGGTGTGACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577784.1
CDS-3UTR CAA 90 bp CAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAGCTAATACTGTTGTCACCTaGTGCTCCACATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: QPPAMQQRATGSCVAVRANTVVT*CSTSSY
Trigger: ATATGAAGATGTGGAGCACAAGGTGACAACAGTATT...AGCTCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp CAGCAGCCCCCTGCCATGCAGCAAAGGGCGACCGGCAGCTGTGTGGCCGTGAGAAATACTGTTGTCACCTaGTGCTCCACATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: QQPPAMQQRATGSCVAVRNTVVT*CSTSSY
Trigger: ATATGAAGATGTGGAGCACAAGGTGACAACAGTATT...TCTCACGGCCACACAGCTGCCGGTCGCCCTTTGCTGCATGGCAGGGGGCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCGTTGTCCAAATACTGTaGTCACCTTGTGCTCCACAT +
Preference number: 5 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCVVQIL*SPCAPH
Trigger: ATGTGGAGCACAAGGTGACAACAGTATTTGGACAAC...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAAGTTGTCCAAATACTGTaGTCACCTTGTGCTCCACAT +
Preference number: 5 (lower is better)
Translates to: RWLGCHSMVHSLAWEKQQVVQIL*SPCAPH
Trigger: ATGTGGAGCACAAGGTGACAACAGTATTTGGACAAC...TTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GGCGGAAGGGGCACAGACCGACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCTTTATCAAGATCATCTaGGTTTTTCAGCAGGATGGA +
Preference number: 5 (lower is better)
Translates to: GGRGTDRRWLGCHSMVHSFIKII*VFQQDG
Trigger: TCCATCCTGCTGAAAAACCAAGATGATCTTGATAAA...GCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGTCGGTCTGTGCCCCTTCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GTCCCCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTAATCCATGTTCTCGCCATTaGTGCTCAGGGAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: VPQLYIPSRVSEDVGSLNPCSRH*CSGSGW
Trigger: CCAGCCGCTCCCTGAGCACAAATGGCGAGAACATGG...ATTAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp AGGAGCTACAAGGGAAAGGGGCTGAGACCTCAAGGGGATGGGCGAGGCTGGCTGACTGTCTGGATCAAATaGGACCTGCTTGGAAGCAAG +
Preference number: 5 (lower is better)
Translates to: RSYKGKGLRPQGDGRGWLTVWIK*DLLGSK
Trigger: CTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAGT...CAGCCAGCCTCGCCCATCCCCTTGAGGTCTCAGCCCCTTTCCCTTGTAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAAGAGCACTCACCTCCTaGCTTGTCTCAGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: LHGPQPCLGEAATSLSPARALTS*LVSGLS
Trigger: AGACAGTCCTGAGACAAGCAAGGAGGTGAGTGCTCT...TGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GATGGCGGCCATAGCTTCATACTCTGCCCACGGTGGTTTCTCTGTCAGCATCTCGAGTCTCGGAGGATGTaGGCTCCCTTAATGTCCCGG +
Preference number: 5 (lower is better)
Translates to: DGGHSFILCPRWFLCQHLESRRM*APLMSR
Trigger: CCGGGACATTAAGGGAGCCAACATCCTCCGAGACTC...GAGATGCTGACAGAGAAACCACCGTGGGCAGAGTATGAAGCTATGGCCGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp GGAAGAACAGAGCTGGCGGTTTTGGACACAGCTGGTGGTAGCATATGGGCTTTCCCATGGTCCACAGCCTaGCCTGGGAGAAGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: GRTELAVLDTAGGSIWAFPWSTA*PGRSSN
Trigger: GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGG...GAAAGCCCATATGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTGTTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTGCTTCATTCATCTTaGGTAAAGGACAGGACTGGC +
Preference number: 5 (lower is better)
Translates to: AGWAATPWSTALPGRSSNLLHSS*VKDRTG
Trigger: GCCAGTCCTGTCCTTTACCAAAGATGAATGAAGCAA...GTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS TCA 90 bp TCCACCCTCCCTTCACTAGTCTGTGACCCAAATTTGACAGCACCCTaGGTGGTAAATCTCCCCCATCTGACCCAACTCCAGCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: STLPSLVCDPNLTAP*VVNLPHLTQLQPGC
Trigger: GCAGCCAGGCTGGAGTTGGGTCAGATGGGGGAGATTTACCACTCAGGGTGCTGTCAAATTTGGGTCACAGACTAGTGAAGGGAGGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578622.5
CDS TCA 90 bp CAAGTTGCCTTGATGACGCCGTATTCGGGGAAATGTTCTTCTGCCTaGAAGGGTGCAAGGGCCAGAGGAGAGCAAGTCACACCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: QVALMTPYSGKCSSA*KGARARGEQVTPQA
Trigger: AGCCTGGGGTGTGACTTGCTCTCCTCTGGCCCTTGCACCCTTTCAGGCAGAAGAACATTTCCCCGAATACGGCGTCATCAAGGCAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577784.1
CDS-3UTR CAA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCCGTCACTCTGCCTATTaGAGTGACCTGTGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPRHSAY*SDLCLC
Trigger: ACAAAGACACAGGTCACTCAAATAGGCAGAGTGACG...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361733.8
CDS-3UTR CAA 90 bp CGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGGTTGTCCAAATACTGTaGTCACCTTGTGCTCCACAT +
Preference number: 5 (lower is better)
Translates to: RVVHLPFCSSGEQRLGQEVVQIL*SPCAPH
Trigger: ATGTGGAGCACAAGGTGACAACAGTATTTGGACAAC...CTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTGCTTCATTCATCTTaGGTAAAGGACAGGACTGGC +
Preference number: 5 (lower is better)
Translates to: PSAPVGNKGWARSAKATTLLHSS*VKDRTG
Trigger: GCCAGTCCTGTCCTTTACCAAAGATGAATGAAGCAA...GGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GGAAGAACAGAGCTGGCGGTTTTGGACACAGCTGGTGGTAGCATATGGGCTTTCACAGAGCTGGCGGTTTaGGACACAGCTGGTGGTAGC +
Preference number: 5 (lower is better)
Translates to: GRTELAVLDTAGGSIWAFTELAV*DTAGGS
Trigger: GCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTGT...GAAAGCCCATATGCTACCACCAGCTGTGTCCAAAACCGCCAGCTCTGTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp ACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCATTTGGAGTGCAGGGTTaGTTGGCTTGTCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: TLAGLPLHGPQPCLGEAAFGVQG*LACLQI
Trigger: AATTTGAAGACAAGCCAACAAACCCTGCACTCCAAA...TGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CAA 90 bp GATGGTCAGGGTCTTCTCAGCGCGGTCCCGCAGACAGCCATAGTACTGCACGATATCTGCCTTGGGAACTaGCTTGTCTCAGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: DGQGLLSAVPQTAIVLHDICLGN*LVSGLS
Trigger: AGACAGTCCTGAGACAAGCAAGTTCCCAAGGCAGAT...ATCGTGCAGTACTATGGCTGTCTGCGGGACCGCGCTGAGAAGACCCTGACCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581732.1
CDS-3UTR CAA 90 bp ACGCTGGCTGGGCTGCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAAATACTGTTGTCACCTaGTGCTCCACATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: TLAGLPLHGPQPCLGEAANTVVT*CSTSSY
Trigger: ATATGAAGATGTGGAGCACAAGGTGACAACAGTATT...TGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGCAGCCCAGCCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp TCCAAGGATTGGCAGCTTCCAGACAAGGAATTTTCTGCACTGCTCAGGGGATCCACGGGGGTCCAGGTATaGCACAGCCAGACCCATGTT +
Preference number: 5 (lower is better)
Translates to: SKDWQLPDKEFSALLRGSTGVQV*HSQTHV
Trigger: AACATGGGTCTGGCTGTGCAATACCTGGACCCCCGT...GGATCCCCTGAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAATCCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGCACTGGGAGACTTGGTaGGCACATTCCTCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGHWETW*AHSSPA
Trigger: TGCAGGAGAGGAATGTGCCAACCAAGTCTCCCAGTG...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp TGGTTGGCACATTCCTCTCCTGCACAGAGAGGGCATTCTCGCTGTCCGCACTCCACTGTCTGGATCAAATaGGACCTGCTTGGAAGCAAG +
Preference number: 5 (lower is better)
Translates to: WLAHSSPAQRGHSRCPHSTVWIK*DLLGSK
Trigger: CTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAGT...GGAGTGCGGACAGCGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp GAGCGCAAAGGCCACAACCTTCAGCTCTTTTCAATGCAGCCTAGGCCCAAGCCCCATACAACGAAGGCTTaGGCTTGTTCTGTGCCCATG +
Preference number: 5 (lower is better)
Translates to: ERKGHNLQLFSMQPRPKPHTTKA*ACSVPM
Trigger: CATGGGCACAGAACAAGCCAAAGCCTTCGTTGTATG...GGGCTTGGGCCTAGGCTGCATTGAAAAGAGCTGAAGGTTGTGGCCTTTGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CAA 90 bp CGACCGTGTCGTCCATCTCCCCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCATTTGGAGTGCAGGGTTaGTTGGCTTGTCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: RPCRPSPLLLQWGTKAGPFGVQG*LACLQI
Trigger: AATTTGAAGACAAGCCAACAAACCCTGCACTCCAAA...TGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGGGGAGATGGACGACACGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CAA 90 bp CTGTTGTCAGGGAAGCTCTGGGCACGGGACATTCGTGATTTCCGGAAGGATGGGCCCTCAGGAGGCATATaGCAAACAGACAAACTCAGC +
Preference number: 5 (lower is better)
Translates to: LLSGKLWARDIRDFRKDGPSGGI*QTDKLS
Trigger: GCTGAGTTTGTCTGTTTGCAATATGCCTCCTGAGGG...CCCATCCTTCCGGAAATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS TCA 90 bp TGTGGTGCACAGACACGTGGTAGCGCCGGGGGTAGGTTCCACCTTTaGCCCCTTTGTCATAAAGCTGAGTTTCCCGATCTGAGTAAGACA +
Preference number: 5 (lower is better)
Translates to: CGAQTRGSAGGRFHL*PLCHKAEFPDLSKT
Trigger: TGTCTTACTCAGATCGGGAAACTCAGCTTTATGACAAAGGGGTCAAAGGTGGAACCTACCCCCGGCGCTACCACGTGTCTGTGCACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577839.1
CDS-3UTR CAA 90 bp CCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCCATAATACTGTTGTCACCTaGTGCTCCACATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: PCLGEAATSLSPAAAPCHNTVVT*CSTSSY
Trigger: ATATGAAGATGTGGAGCACAAGGTGACAACAGTATT...ATGGCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp CAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCAGCAGCAGCCCCCTGCTTTATCAAGATCATCTaGGTTTTTCAGCAGGATGGA +
Preference number: 5 (lower is better)
Translates to: QPCLGEAATSLSPAAAPCFIKII*VFQQDG
Trigger: TCCATCCTGCTGAAAAACCAAGATGATCTTGATAAA...GCAGGGGGCTGCTGCTGGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp AGCTCATCCAGCCCAGAGATGCCCTGGTGGTCTCCAGACATTGGAAGGAAAAACGAGTATTCCTGTCTGTaGTCAGGGAAGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SSSSPEMPWWSPDIGRKNEYSCL*SGKLWA
Trigger: TGCCCAGAGCTTCCCTGACAACAGACAGGAATACTC...GTTTTTCCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCTGGATGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTAATGTCCCGAGAGCACTCACCTCCTaGCTTGTCTCAGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: QLYIPSRVSEDVGSLNVPRALTS*LVSGLS
Trigger: AGACAGTCCTGAGACAAGCAAGGAGGTGAGTGCTCT...CGGGACATTAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp ACAAAAATGCGCCTCAGGAAGTCCCGGCCATGTTCAGAGATGTGGGAGGGCAGCCCGTTGTGCTCGAACTaGATTCTGACGTCACTCTAT +
Preference number: 5 (lower is better)
Translates to: TKMRLRKSRPCSEMWEGSPLCSN*ILTSLY
Trigger: ATAGAGTGACGTCAGAATCAAGTTCGAGCACAACGG...GCTGCCCTCCCACATCTCTGAACATGGCCGGGACTTCCTGAGGCGCATTTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp AAGTCCCCCAGCTTTACATTCCCAGCAGAGTCTCGGAGGATGTTGGCTCCCTTATCACAGGGATCTGCCTaGGGAACTTGCTTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: KSPSFTFPAESRRMLAPLSQGSA*GTCLSQ
Trigger: CTGAGACAAGCAAGTTCCCAAGGCAGATCCCTGTGA...TAAGGGAGCCAACATCCTCCGAGACTCTGCTGGGAATGTAAAGCTGGGGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581732.1
CDS-3UTR CAA 90 bp CCTTCTGCTCCAGTGGGGAACAAAGGCTGGGCCAGGAGCGCAAAGGCCACAACCTTTATCAAGATCATCTaGGTTTTTCAGCAGGATGGA +
Preference number: 5 (lower is better)
Translates to: PSAPVGNKGWARSAKATTFIKII*VFQQDG
Trigger: TCCATCCTGCTGAAAAACCAAGATGATCTTGATAAA...GGTTGTGGCCTTTGCGCTCCTGGCCCAGCCTTTGTTCCCCACTGGAGCAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp ATTGGCAGCTTCCAGACAAGGAATTTTCTGCACTGCTCAGGGGATCCAGCATGCGAGTATTCCTGTCTGTaGTCAGGGAAGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: IGSFQTRNFLHCSGDPACEYSCL*SGKLWA
Trigger: TGCCCAGAGCTTCCCTGACAACAGACAGGAATACTC...GCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000585302.1
CDS-3UTR CAA 90 bp GTCCAAGGATTGGCAGCTTCCAGACAAGGAATTTTCTGCACTGCTCAGGGGATCGAGTATTCCTGTCTGTaGTCAGGGAAGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VQGLAASRQGIFCTAQGIEYSCL*SGKLWA
Trigger: TGCCCAGAGCTTCCCTGACAACAGACAGGAATACTC...GATCCCCTGAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAATCCTTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000585302.1
CDS-3UTR CAA 90 bp GAAAATAACACTCTTCATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGTCAAATTGGACCTGCTaGGAAGCAAGTTCACGTCCC +
Preference number: 5 (lower is better)
Translates to: ENNTLHTLASVLCPQTLWSNWTC*EASSRP
Trigger: GGGACGTGAACTTGCTTCCAAGCAGGTCCAATTTGA...CCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGTTATTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CTGGTCTTTCACCGAGCCCCCTGGCATGTACTCCATGAAGATGGTCAGGGTCTTACTGTCTGGATCAAATaGGACCTGCTTGGAAGCAAG +
Preference number: 5 (lower is better)
Translates to: LVFHRAPWHVLHEDGQGLTVWIK*DLLGSK
Trigger: CTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAGT...AAGACCCTGACCATCTTCATGGAGTACATGCCAGGGGGCTCGGTGAAAGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577597.5
ENST00000581732.1
CDS-3UTR CAA 90 bp TCATTCATCTTTGGTAAAGGACAGGACTGGCAGAGCCAACCTGGGACTCTAGGGAGAGCACTCACCTCCTaGCTTGTCTCAGGACTGTCT +
Preference number: 5 (lower is better)
Translates to: SFIFGKGQDWQSQPGTLGRALTS*LVSGLS
Trigger: AGACAGTCCTGAGACAAGCAAGGAGGTGAGTGCTCT...CCCTAGAGTCCCAGGTTGGCTCTGCCAGTCCTGTCCTTTACCAAAGATGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGCCAACTCTAAGCTGCTaGGAGATGCTGTTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGPTLSC*EMLFPQ
Trigger: TTGGGGAAACAGCATCTCCAAGCAGCTTAGAGTTGG...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp CATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGGCTTCGGTGCCAATTGCAGGGTTTGTTGGCTaGTCTTCAAATTCATTTTCA +
Preference number: 5 (lower is better)
Translates to: HTLASVLCPQTLWASVPIAGFVG*SSNSFS
Trigger: TGAAAATGAATTTGAAGACAAGCCAACAAACCCTGC...AATTGGCACCGAAGCCCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361357.7
ENST00000361733.8
CDS-3UTR CAA 90 bp TCTCTGTCAGAGCACCGTAAGCCTTCAACTGGTCTTTCACCGAGCCCCCTGGCACTGACGTCACTCTATTaGAGTGACCTGTGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: SLSEHRKPSTGLSPSPLALTSLY*SDLCLC
Trigger: ACAAAGACACAGGTCACTCAAATAGAGTGACGTCAG...TGCCAGGGGGCTCGGTGAAAGACCAGTTGAAGGCTTACGGTGCTCTGACAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp GCCACTCCATGGTCCACAGCCTTGCCTGGGAGAAGCAGCAACTTCACTGAGCCCTTTATCAAGATCATCTaGGTTTTTCAGCAGGATGGA +
Preference number: 5 (lower is better)
Translates to: ATPWSTALPGRSSNFTEPFIKII*VFQQDG
Trigger: TCCATCCTGCTGAAAAACCAAGATGATCTTGATAAA...GGGCTCAGTGAAGTTGCTGCTTCTCCCAGGCAAGGCTGTGGACCATGGAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
ENST00000584573.5
CDS-3UTR CAA 90 bp GAAAATAACACTCTTCATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGACTGTCTGGATCAAATaGGACCTGCTTGGAAGCAAG +
Preference number: 5 (lower is better)
Translates to: ENNTLHTLASVLCPQTLWTVWIK*DLLGSK
Trigger: CTTGCTTCCAAGCAGGTCCAATTTGATCCAGACAGT...CCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGTTATTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp AGCTCATCCAGCCCAGAGATGCCCTGGTGGTCTCCAGACATTGGAAGGAAAAACGTTGTCCAAATACTGTaGTCACCTTGTGCTCCACAT +
Preference number: 5 (lower is better)
Translates to: SSSSPEMPWWSPDIGRKNVVQIL*SPCAPH
Trigger: ATGTGGAGCACAAGGTGACAACAGTATTTGGACAAC...GTTTTTCCTTCCAATGTCTGGAGACCACCAGGGCATCTCTGGGCTGGATGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GGAAACTGGGTGTTGAGAGGGAGGAGCTCTAGCAATAGGCACATTTTGGAGGGGTTGCTTCATTCATCTTaGGTAAAGGACAGGACTGGC +
Preference number: 5 (lower is better)
Translates to: GNWVLRGRSSSNRHILEGLLHSS*VKDRTG
Trigger: GCCAGTCCTGTCCTTTACCAAAGATGAATGAAGCAA...CCCCTCCAAAATGTGCCTATTGCTAGAGCTCCTCCCTCTCAACACCCAGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS CCA 90 bp ATTCTGACGTCACTCTATTTGAGTGACCTGTGTCTTTGTTCTTCATaGTCTCATATCCAGGCATCCGGTGACGTCGGTTCATCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: ILTSLYLSDLCLCSS*SHIQASGDVGSSGG
Trigger: CCCTCCAGATGAACCGACGTCACCGGATGCCTGGATATGAGACCATGAAGAACAAAGACACAGGTCACTCAAATAGAGTGACGTCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp CCTCCACAAAAATGCGCCTCAGGAAGTCCCGGCCATGTTCAGAGATGTGGGAGGTTTATCAAGATCATCTaGGTTTTTCAGCAGGATGGA +
Preference number: 5 (lower is better)
Translates to: PPQKCASGSPGHVQRCGRFIKII*VFQQDG
Trigger: TCCATCCTGCTGAAAAACCAAGATGATCTTGATAAA...CCTCCCACATCTCTGAACATGGCCGGGACTTCCTGAGGCGCATTTTTGTGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS-3UTR CAA 90 bp GAAAATAACACTCTTCATACCCTGGCGTCAGTCTTGTGCCCCCAGACCCTCTGGAATACTGTTGTCACCTaGTGCTCCACATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: ENNTLHTLASVLCPQTLWNTVVT*CSTSSY
Trigger: ATATGAAGATGTGGAGCACAAGGTGACAACAGTATT...CCAGAGGGTCTGGGGGCACAAGACTGACGCCAGGGTATGAAGAGTGTTATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp GCATATTGCAAACAGACAAACTCAGCAACAGGATCAGTGCTTAGATCTCTCAAGTGGGCTGTCCAAGGATaGGCAGCTTCCAGACAAGGA +
Preference number: 5 (lower is better)
Translates to: AYCKQTNSATGSVLRSLKWAVQG*AASRQG
Trigger: TCCTTGTCTGGAAGCTGCCAATCCTTGGACAGCCCA...CTTGAGAGATCTAAGCACTGATCCTGTTGCTGAGTTTGTCTGTTTGCAATATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS GCA 90 bp CTCAGGAGGCATATTGCAAACAGACAAACTCAGCAACAGGATCAGTaGTTAGATCTCTCAAGCTCAGCTCAGGATCTTCAGAGGACACTT +
Preference number: 5 (lower is better)
Translates to: LRRHIANRQTQQQDQ*LDLSSSAQDLQRTL
Trigger: AAGTGTCCTCTGAAGATCCTGAGCTGAGCTTGAGAGATCTAAGCACTGATCCTGTTGCTGAGTTTGTCTGTTTGCAATATGCCTCCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS-3UTR CAA 90 bp TCATTCATCTTTGGTAAAGGACAGGACTGGCAGAGCCAACCTGGGACTCTAGGGAATACTGTTGTCACCTaGTGCTCCACATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: SFIFGKGQDWQSQPGTLGNTVVT*CSTSSY
Trigger: ATATGAAGATGTGGAGCACAAGGTGACAACAGTATT...CCCTAGAGTCCCAGGTTGGCTCTGCCAGTCCTGTCCTTTACCAAAGATGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000579585.5
CDS-3UTR CAA 90 bp ATTGGCAGCTTCCAGACAAGGAATTTTCTGCACTGCTCAGGGGATCCAGCATGCAAACATTACCAGTACTaGCCTGGATTCCAGAAGTTA +
Preference number: 5 (lower is better)
Translates to: IGSFQTRNFLHCSGDPACKHYQY*PGFQKL
Trigger: TAACTTCTGGAATCCAGGCAAGTACTGGTAATGTTT...GCATGCTGGATCCCCTGAGCAGTGCAGAAAATTCCTTGTCTGGAAGCTGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS-3UTR CAA 90 bp CAAGCACTCAAACATTACCAGTACTTGCCTGGATTCCAGAAGTTACTCAGTAAGCCCTTCCAGAAAGTCTaGTCTGTACCAGCACACAGC +
Preference number: 5 (lower is better)
Translates to: QALKHYQYLPGFQKLLSKPFQKV*SVPAHS
Trigger: GCTGTGTGCTGGTACAGACAAGACTTTCTGGAAGGG...CTTACTGAGTAACTTCTGGAATCCAGGCAAGTACTGGTAATGTTTGAGTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585302.1
CDS CCA 72 bp CCTCCTGTTCGTCCATGGTGGCGATGGCGGCGGCGGTaGCTAAGGTCCGTGAGTGTCACCTCCGCAGCCGGG +
Preference number: 6 (lower is better)
Translates to: PPVRPWWRWRRR*LRSVSVTSAAG
Trigger: CCCGGCTGCGGAGGTGACACTCACGGACCTTAGCCACCGCCGCCGCCATCGCCACCATGGACGAACAGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000584573.5
CDS CCA 72 bp CCTCCTGTTCGTCCATGGTGGCGATGGCGGCGGCGGTaGCTAAGGTCCGTGAGTGTCACCTCAGGAACGCTC +
Preference number: 6 (lower is better)
Translates to: PPVRPWWRWRRR*LRSVSVTSGTL
Trigger: GAGCGTTCCTGAGGTGACACTCACGGACCTTAGCCACCGCCGCCGCCATCGCCACCATGGACGAACAGGAGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579585.5
CDS CAA 90 bp GGAGCCAGGCTTCAGACACTCCAAGGCTTATCCCATGTGGTGCATTaGGGCCAAAGCCACCACCTGCTGAGCCTAAGGGTCCCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: GARLQTLQGLSHVVH*GQSHHLLSLRVPGA
Trigger: GGCCCCTGGGACCCTTAGGCTCAGCAGGTGGTGGCTTTGGCCCAAATGCACCACATGGGATAAGCCTTGGAGTGTCTGAAGCCTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577839.1
CDS TCA 72 bp ATACCAGCTCCAGCCCATCCCGTCCGCACTCCCACCTaGCTCATTCCACAGAGGCTGCTGTCCCAAGCACTC +
Preference number: 6 (lower is better)
Translates to: IPAPAHPVRTPT*LIPQRLLSQAL
Trigger: GAGTGCTTGGGACAGCAGCCTCTGTGGAATGAGTCAGGTGGGAGTGCGGACGGGATGGGCTGGAGCTGGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577784.1
CDS CAA 90 bp GACCACCTGGGCAGTCTCCTCCTAGCCAGGGACAGCTCCTCACACTaGGTTGGCACATTCCTCTCCTGCACAGAGAGGGCATTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: DHLGSLLLARDSSSH*VGTFLSCTERAFSL
Trigger: CAGCGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCCAACCAAGTGTGAGGAGCTGTCCCTGGCTAGGAGGAGACTGCCCAGGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577839.1
CDS GCA 72 bp GACAGCTCCTCACACTTGGTTGGCACATTCCTCTCCTaGACAGAGAGGGCATTCTCGCTGTCCGCACTCCGC +
Preference number: 6 (lower is better)
Translates to: DSSSHLVGTFLS*TERAFSLSALR
Trigger: GCGGAGTGCGGACAGCGAGAATGCCCTCTCTGTGCAGGAGAGGAATGTGCCAACCAAGTGTGAGGAGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577839.1
CDS CAA 72 bp GGCAGTCTCCTCCTAGCCAGGGACAGCTCCTCACACTaGGTTGGCACATTCCTCTCCTGCACAGAGAGGGCA +
Preference number: 6 (lower is better)
Translates to: GSLLLARDSSSH*VGTFLSCTERA
Trigger: TGCCCTCTCTGTGCAGGAGAGGAATGTGCCAACCAAGTGTGAGGAGCTGTCCCTGGCTAGGAGGAGACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577839.1
CDS GCA 72 bp CCGTCCGCACTCCCACCTGACTCATTCCACAGAGGCTaGTGTCCCAAGCACTCCAAGAATCAGGACAAAAGC +
Preference number: 6 (lower is better)
Translates to: PSALPPDSFHRG*CPKHSKNQDKS
Trigger: GCTTTTGTCCTGATTCTTGGAGTGCTTGGGACAGCAGCCTCTGTGGAATGAGTCAGGTGGGAGTGCGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577784.1
CDS TCA 72 bp GACGTCGGTTCATCTGGAGGGCCACCAGATCGTTCATaGTTGAGTTCAATGCCTCCTGTTCGTCCATGGTGG +
Preference number: 6 (lower is better)
Translates to: DVGSSGGPPDRS*LSSMPPVRPWW
Trigger: CCACCATGGACGAACAGGAGGCATTGAACTCAATCATGAACGATCTGGTGGCCCTCCAGATGAACCGACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS GCA 72 bp TGCCTTGATGACGCCGTATTCGGGGAAATGTTCTTCTaGCTGAAAGGGTGCAAGGGCCAGAGGAGAGCAAGT +
Preference number: 6 (lower is better)
Translates to: CLDDAVFGEMFF*LKGCKGQRRAS
Trigger: ACTTGCTCTCCTCTGGCCCTTGCACCCTTTCAGGCAGAAGAACATTTCCCCGAATACGGCGTCATCAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577784.1
CDS TCA 72 bp TCGGTTCATCTGGAGGGCCACCAGATCGTTCATGATTaGGTTCAATGCCTCCTGTTCGTCCATGGTGGCGAT +
Preference number: 6 (lower is better)
Translates to: SVHLEGHQIVHD*VQCLLFVHGGD
Trigger: ATCGCCACCATGGACGAACAGGAGGCATTGAACTCAATCATGAACGATCTGGTGGCCCTCCAGATGAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS TCA 72 bp TCTTTGTTCTTCATGGTCTCATATCCAGGCATCCGGTaGCGTCGGTTCATCTGGAGGGCCACCAGATCGTTC +
Preference number: 6 (lower is better)
Translates to: SLFFMVSYPGIR*RRFIWRATRSF
Trigger: GAACGATCTGGTGGCCCTCCAGATGAACCGACGTCACCGGATGCCTGGATATGAGACCATGAAGAACAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000577597.5
ENST00000579585.5
ENST00000584573.5
CDS TCA 72 bp TTGATGACGCCGTATTCGGGGAAATGTTCTTCTGCCTaGAAGGGTGCAAGGGCCAGAGGAGAGCAAGTCACA +
Preference number: 6 (lower is better)
Translates to: LMTPYSGKCSSA*KGARARGEQVT
Trigger: TGTGACTTGCTCTCCTCTGGCCCTTGCACCCTTTCAGGCAGAAGAACATTTCCCCGAATACGGCGTCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577784.1
CDS GCA 72 bp GGCCGGCTGAACGCTATAATTCGCCTCTCCCCGTTGTaGTCGAACTTGATTCTGACGTCACTCTGCCTATTT +
Preference number: 6 (lower is better)
Translates to: GRLNAIIRLSPL*SNLILTSLCLF
Trigger: AAATAGGCAGAGTGACGTCAGAATCAAGTTCGAGCACAACGGGGAGAGGCGAATTATAGCGTTCAGCCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361733.8
ENST00000577395.5
CDS TCA 72 bp TCTGTTGTCAGGGAAGCTCTGGGCACGGGACATTCGTaGTTTCCGGAAGGATGGGCTGGAGAAAACAAAAAG +
Preference number: 6 (lower is better)
Translates to: SVVREALGTGHS*FPEGWAGENKK
Trigger: CTTTTTGTTTTCTCCAGCCCATCCTTCCGGAAATCACGAATGTCCCGTGCCCAGAGCTTCCCTGACAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578622.5
CDS GCA 72 bp GGCCGGCTGAACGCTATAATTCGCCTCTCCCCGTTGTaGTCGAACTTGATTCTGACGTCACTCTATTTGAGT +
Preference number: 6 (lower is better)
Translates to: GRLNAIIRLSPL*SNLILTSLYLS
Trigger: ACTCAAATAGAGTGACGTCAGAATCAAGTTCGAGCACAACGGGGAGAGGCGAATTATAGCGTTCAGCCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS GCA 72 bp GGCCGGCTGAACGCTATAATTCGCCTCTCCCCGTTGTaGTCGAACTTGATTCTGACGTCACTCAAAAATTTC +
Preference number: 6 (lower is better)
Translates to: GRLNAIIRLSPL*SNLILTSLKNF
Trigger: GAAATTTTTGAGTGACGTCAGAATCAAGTTCGAGCACAACGGGGAGAGGCGAATTATAGCGTTCAGCCGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361357.7
ENST00000579585.5
ENST00000584573.5
CDS CCA 72 bp TCTGCCTATTTGAGTGACCTGTGTCTTTGTTCTTCATaGTCTCATATCCAGGCATCCGGTGACGTCGGTTCA +
Preference number: 6 (lower is better)
Translates to: SAYLSDLCLCSS*SHIQASGDVGS
Trigger: TGAACCGACGTCACCGGATGCCTGGATATGAGACCATGAAGAACAAAGACACAGGTCACTCAAATAGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361357.7
ENST00000361733.8
ENST00000577395.5
ENST00000579585.5
ENST00000584573.5
CDS CCA 72 bp TCACTCTATTTGAGTGACCTGTGTCTTTGTTCTTCATaGTCTCATATCCAGGCATCCGGTGACGTCGGTTCA +
Preference number: 6 (lower is better)
Translates to: SLYLSDLCLCSS*SHIQASGDVGS
Trigger: TGAACCGACGTCACCGGATGCCTGGATATGAGACCATGAAGAACAAAGACACAGGTCACTCAAATAGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577597.5
CDS CAA 72 bp AACGCTATAATTCGCCTCTCCCCGTTGTGCTCGAACTaGATTCTGACGTCACTCTATTTGAGTGACCTGTGT +
Preference number: 6 (lower is better)
Translates to: NAIIRLSPLCSN*ILTSLYLSDLC
Trigger: ACACAGGTCACTCAAATAGAGTGACGTCAGAATCAAGTTCGAGCACAACGGGGAGAGGCGAATTATAGCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577597.5