RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP3K15 (Homo sapiens)

Ensembl gene IDs: ENSG00000180815

Ensembl transcript IDs: ENST00000338883.9, ENST00000359173.7, ENST00000470101.1, ENST00000518578.5

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATaGGCTCTCCCTGTGTGGGCAGGGCCAGGACGACACCGCGGGGAC +
Preference number: 1 (lower is better)
Translates to: RSLGRQSRARCCWWP*ALPVWAGPGRHRGD
Trigger: GTCCCCGCGGTGTCGTCCTGGCCCTGCCCACACAGGGAGAGCCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 90 bp GAGGTGGCCAAGGTGGTGCCTGGGCGCCCGGGTCCTCTCAAAGAGTaGGTCAGGCTGGGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTC +
Preference number: 1 (lower is better)
Translates to: EVAKVVPGRPGPLKE*VRLGVGVWGDRAVL
Trigger: GAGCACGGCTCTGTCTCCCCAGACTCCGACGCCCAGCCTGACGCACTCTTTGAGAGGACCCGGGCGCCCAGGCACCACCTTGGCCACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 90 bp CGCCCGGGTCCTCTCAAAGAGTGCGTCAGGCTGGGCGTCGGAGTCTaGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGGGCTC +
Preference number: 1 (lower is better)
Translates to: RPGPLKECVRLGVGV*GDRAVLAAAGGHGL
Trigger: GAGCCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCCCAGCCTGACGCACTCTTTGAGAGGACCCGGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 90 bp AGGTGGTGCCTGGGCGCCCGGGTCCTCTCAAAGAGTGCGTCAGGCTaGGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: RWCLGARVLSKSASG*ASESGETEPCSLLL
Trigger: CAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCCCAGCCTGACGCACTCTTTGAGAGGACCCGGGCGCCCAGGCACCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 90 bp AGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGCCCTaGTCCCTGTCCTCCGGGGACGAGGCCAAGCCCCGGTCTTCCAAG +
Preference number: 1 (lower is better)
Translates to: RMARRSLSLRSRKRP*SLSSGDEAKPRSSK
Trigger: CTTGGAAGACCGGGGCTTGGCCTCGTCCCCGGAGGACAGGGACCAGGGCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 90 bp CCTCCCAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTaGGTAGCAGGAAGAGGCCCTGGTCCCTGTCCTCCGGGGACGAGG +
Preference number: 1 (lower is better)
Translates to: PPRGFCTGWHGAHCP*VAGRGPGPCPPGTR
Trigger: CCTCGTCCCCGGAGGACAGGGACCAGGGCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 90 bp TCAAAGTGGGCTCGGAGCTCTGGGATGAGAATGGTGACCGCGGCCTaGACCGCTCGGCGGATGATGTTGTCCATCGCGAACATCCAGTGG +
Preference number: 1 (lower is better)
Translates to: SKWARSSGMRMVTAA*TARRMMLSIANIQW
Trigger: CCACTGGATGTTCGCGATGGACAACATCATCCGCCGAGCGGTGCAGGCCGCGGTCACCATTCTCATCCCAGAGCTCCGAGCCCACTTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 90 bp GAACTCTGGGCCACACACTCCTGCAGGTTGGAAGCCACCTGGTTCTaGTCCTCCCAGAGGATTTTGTACAGGATGGCACGGCGCTCACTG +
Preference number: 1 (lower is better)
Translates to: ELWATHSCRLEATWF*SSQRILYRMARRSL
Trigger: CAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTGGGAGGAGCAGAACCAGGTGGCTTCCAACCTGCAGGAGTGTGTGGCCCAGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 90 bp TCTTCGGAACTCTGGGCCACACACTCCTGCAGGTTGGAAGCCACCTaGTTCTGCTCCTCCCAGAGGATTTTGTACAGGATGGCACGGCGC +
Preference number: 1 (lower is better)
Translates to: SSELWATHSCRLEAT*FCSSQRILYRMARR
Trigger: GCGCCGTGCCATCCTGTACAAAATCCTCTGGGAGGAGCAGAACCAGGTGGCTTCCAACCTGCAGGAGTGTGTGGCCCAGAGTTCCGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 90 bp CCCAGGGACCAGATATCGGCTGGGGCACCATATCCGCGAGGCCCTTaGTCAATTATCTCAGGTGCCATGTACTGCAGGGTGCCAGTAAAA +
Preference number: 1 (lower is better)
Translates to: PRDQISAGAPYPRGP*SIISGAMYCRVPVK
Trigger: TTTTACTGGCACCCTGCAGTACATGGCACCTGAGATAATTGACCAAGGGCCTCGCGGATATGGTGCCCCAGCCGATATCTGGTCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 90 bp CTGACTGATGGACGAGCTGTCAAAGTCCAGGTCCACCTTGAGCTTTaGTATTGTGGTCGCCATCACCCGGTGCTCTGGGGAGCGGATGAA +
Preference number: 1 (lower is better)
Translates to: LTDGRAVKVQVHLEL*YCGRHHPVLWGADE
Trigger: TTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATCAAAGCTCAAGGTGGACCTGGACTTTGACAGCTCGTCCATCAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 90 bp TCCAGGTCCACCTTGAGCTTTGATATTGTGGTCGCCATCACCCGGTaGTCTGGGGAGCGGATGAAGTCCCTCAGGATCCCAATGATTTGC +
Preference number: 1 (lower is better)
Translates to: SRSTLSFDIVVAITR*SGERMKSLRIPMIC
Trigger: GCAAATCATTGGGATCCTGAGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATCAAAGCTCAAGGTGGACCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 90 bp CAGTGGTGGCACGTTTGTGGGGGTCAGGCTCGAAACAGGATAAAATaGAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGAATCTCAGGGT +
Preference number: 1 (lower is better)
Translates to: QWWHVCGGQARNRIK*RLGLQLKGLLESQG
Trigger: ACCCTGAGATTCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 90 bp CGGTGCTCTGGGGAGCGGATGAAGTCCCTCAGGATCCCAATGATTTaGTTGATGTGTCCAACTGAGAGATGCAACTCTTCGGAACTCTGG +
Preference number: 1 (lower is better)
Translates to: RCSGERMKSLRIPMI*LMCPTERCNSSELW
Trigger: CCAGAGTTCCGAAGAGTTGCATCTCTCAGTTGGACACATCAAGCAAATCATTGGGATCCTGAGGGACTTCATCCGCTCCCCAGAGCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 90 bp TCTGAGGGCTTGAAGGCAATTCGGTTCTTCTTGCCCTTGTTCACCTaGCTTAAGAAACCCTCTCTCAGTAGCTCAGCAGTGGTGGCACGT +
Preference number: 1 (lower is better)
Translates to: SEGLKAIRFFLPLFT*LKKPSLSSSAVVAR
Trigger: ACGTGCCACCACTGCTGAGCTACTGAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCTTCAAGCCCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 90 bp CTTAAGAAACCCTCTCTCAGTAGCTCAGCAGTGGTGGCACGTTTGTaGGGGTCAGGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCA +
Preference number: 1 (lower is better)
Translates to: LKKPSLSSSAVVARL*GSGSKQDKMKARAS
Trigger: TGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTACTGAGAGAGGGTTTCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 90 bp GATGAAGTCCCTCAGGATCCCAATGATTTGCTTGATGTGTCCAACTaGGAGATGCAACTCTTCGGAACTCTGGGCCACACACTCCTGCAG +
Preference number: 1 (lower is better)
Translates to: DEVPQDPNDLLDVSN*EMQLFGTLGHTLLQ
Trigger: CTGCAGGAGTGTGTGGCCCAGAGTTCCGAAGAGTTGCATCTCTCAGTTGGACACATCAAGCAAATCATTGGGATCCTGAGGGACTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 90 bp CGTGCAGAGGCTGAGAATACCTGCTATCTCTCTCCGGGATTTCTTTaGTGGCTATTCGCACTTGATTGCTCAGATCTCGGCCAGCATACA +
Preference number: 1 (lower is better)
Translates to: RAEAENTCYLSPGFL*WLFALDCSDLGQHT
Trigger: TGTATGCTGGCCGAGATCTGAGCAATCAAGTGCGAATAGCCATCAAAGAAATCCCGGAGAGAGATAGCAGGTATTCTCAGCCTCTGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 90 bp CACAATCCCATACGTGCCTTTCCCCAAGACAACTCTCTCACCATTTaGATCATGGTCATACTCATACTCCAAGGTGTCTCCATCGGTCTC +
Preference number: 1 (lower is better)
Translates to: HNPIRAFPQDNSLTI*IMVILILQGVSIGL
Trigger: GAGACCGATGGAGACACCTTGGAGTATGAGTATGACCATGATGCAAATGGTGAGAGAGTTGTCTTGGGGAAAGGCACGTATGGGATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 90 bp GCACTTGATTGCTCAGATCTCGGCCAGCATACACAATCCCATACGTaGCTTTCCCCAAGACAACTCTCTCACCATTTGCATCATGGTCAT +
Preference number: 1 (lower is better)
Translates to: ALDCSDLGQHTQSHT*LSPRQLSHHLHHGH
Trigger: ATGACCATGATGCAAATGGTGAGAGAGTTGTCTTGGGGAAAGGCACGTATGGGATTGTGTATGCTGGCCGAGATCTGAGCAATCAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 90 bp CAAGGTGTCTCCATCGGTCTCTCCCTCCAGCTCCACCGTACTGCCTaGTGTATTGGTTATCATCTCTTTGACCAAAGAGAAAAATCTACT +
Preference number: 1 (lower is better)
Translates to: QGVSIGLSLQLHRTA*CIGYHLFDQREKST
Trigger: AGTAGATTTTTCTCTTTGGTCAAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACCGATGGAGACACCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 90 bp GGCTTCATTGTTTATGGAAACATAAGAAGGCTGGTACACTTTGGTTaGCTCTATGACCAGAACCTGGTTAGAGATTACGCGGTTGTCTGC +
Preference number: 1 (lower is better)
Translates to: GFIVYGNIRRLVHFG*LYDQNLVRDYAVVC
Trigger: GCAGACAACCGCGTAATCTCTAACCAGGTTCTGGTCATAGAGCCAACCAAAGTGTACCAGCCTTCTTATGTTTCCATAAACAATGAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 90 bp TCGTATCAGTTTTGTGTTTCTCAAATTGAAGTACCATACCAGTTCTaGGGCAGTGTCCCAGCTTCCATGTTTGTTAAATACCCCTTGTTT +
Preference number: 1 (lower is better)
Translates to: SYQFCVSQIEVPYQF*GSVPASMFVKYPLF
Trigger: AAACAAGGGGTATTTAACAAACATGGAAGCTGGGACACTGCCTCAGAACTGGTATGGTACTTCAATTTGAGAAACACAAAACTGATACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp ACCGCGGCCTGCACCGCTCGGCGGATGATGTTGTCCATCGCGAACATCCAGTGGTGCTGCTGGTGGCCATaGGCTCTCCCTGTGTGGGCA +
Preference number: 2 (lower is better)
Translates to: TAACTARRMMLSIANIQWCCWWP*ALPVWA
Trigger: TGCCCACACAGGGAGAGCCCATGGCCACCAGCAGCA...CCACTGGATGTTCGCGATGGACAACATCATCCGCCGAGCGGTGCAGGCCGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 90 bp TCCTCCCAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTaGCGTAGCAGGAAGAGGCCCTGGTCCCTGTCCTCCGGGGACGAG +
Preference number: 2 (lower is better)
Translates to: SSQRILYRMARRSLS*RSRKRPWSLSSGDE
Trigger: CTCGTCCCCGGAGGACAGGGACCAGGGCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp CTGGGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATTATCCGCGAGGCCCTTaGTCAATTATCTCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: LGVGVWGDRAVLAAAGGHYPRGP*SIISGA
Trigger: GGCACCTGAGATAATTGACCAAGGGCCTCGCGGATA...ATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp CAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGAGGTGGCCAAGGTaGTGCCTGGGCGCCCGGGTC +
Preference number: 2 (lower is better)
Translates to: QRILYRMARRSLSLRSRKRRWPR*CLGARV
Trigger: GACCCGGGCGCCCAGGCACCACCTTGGCCACCTCCT...CTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp GGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGGGCTGGTACACTTTGGTTaGCTCTATGACCAGAACCTG +
Preference number: 2 (lower is better)
Translates to: GVGVWGDRAVLAAAGGHGLVHFG*LYDQNL
Trigger: CAGGTTCTGGTCATAGAGCCAACCAAAGTGTACCAG...CCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp GATATTGTGGTCGCCATCACCCGGTGCTCTGGGGAGCGGATGAAGTCCCTCAGGGGACCAGATATCGGCTaGGGCACCATATCCGCGAGG +
Preference number: 2 (lower is better)
Translates to: DIVVAITRCSGERMKSLRGPDIG*GTISAR
Trigger: CCTCGCGGATATGGTGCCCCAGCCGATATCTGGTCC...CCTGAGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp GGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGGGTCTGGAATCTCAGGGTaGATCTTAAACATGCCCACT +
Preference number: 2 (lower is better)
Translates to: GVGVWGDRAVLAAAGGHGSGISG*ILNMPT
Trigger: AGTGGGCATGTTTAAGATCCACCCTGAGATTCCAGA...CCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp AAGCCTTGTCTTTGGTTTCTGAGGCCTCCTGAGCCCTTCTGTACTGGGAGACCGCTGGGCGTCGGAGTCTaGGGAGACAGAGCCGTGCTC +
Preference number: 2 (lower is better)
Translates to: KPCLWFLRPPEPFCTGRPLGVGV*GDRAVL
Trigger: GAGCACGGCTCTGTCTCCCCAGACTCCGACGCCCAG...CGGTCTCCCAGTACAGAAGGGCTCAGGAGGCCTCAGAAACCAAAGACAAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp ACCTGGTTCTGCTCCTCCCAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGAAGAGTGCGTCAGGCTaGGCGTCGGAGTCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: TWFCSSQRILYRMARRSLKSASG*ASESGE
Trigger: CTCCCCAGACTCCGACGCCCAGCCTGACGCACTCTT...CAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTGGGAGGAGCAGAACCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp TGTACTGGGAGACCGCACTCCAGAGTCTGCAGAGGAGACCACCCCGTAGTCGAACATCACCCGGTGCTCTaGGGAGCGGATGAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: CTGRPHSRVCRGDHPVVEHHPVL*GADEVP
Trigger: AGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATG...TTCGACTACGGGGTGGTCTCCTCTGCAGACTCTGGAGTGCGGTCTCCCAGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 90 bp GGGATGAGAATGGTGACCGCGGCCTGCACCGCTCGGCGGATGATGTaGTCCATCGCGAACATCCAGTGGGGCCTAATTAAGTGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: GMRMVTAACTARRMM*SIANIQWGLIKWFL
Trigger: GAGGAACCACTTAATTAGGCCCCACTGGATGTTCGCGATGGACAACATCATCCGCCGAGCGGTGCAGGCCGCGGTCACCATTCTCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 90 bp GCCCAGGGACCAGATATCGGCTGGGGCACCATATCCGCGAGGCCCTaGGTCAATTATCTCAGGTGCCATGTACTGCAGGGTGCCAGTAAA +
Preference number: 2 (lower is better)
Translates to: AQGPDIGWGTISARP*VNYLRCHVLQGASK
Trigger: TTTACTGGCACCCTGCAGTACATGGCACCTGAGATAATTGACCAAGGGCCTCGCGGATATGGTGCCCCAGCCGATATCTGGTCCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 90 bp TCCTGCAGGTTGGAAGCCACCTGGTTCTGCTCCTCCCAGAGGATTTaGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: SCRLEATWFCSSQRI*YRMARRSLSLRSRK
Trigger: CTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTGGGAGGAGCAGAACCAGGTGGCTTCCAACCTGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp CTGGGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATCTTCCTCCAGGCACCTaGTCCATAAATATCTTAATG +
Preference number: 2 (lower is better)
Translates to: LGVGVWGDRAVLAAAGGHLPPGT*SINILM
Trigger: CATTAAGATATTTATGGAGCAGGTGCCTGGAGGAAG...ATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp AAGCCTTGTCTTTGGTTTCTGAGGCCTCCTGAGCCCTTCTGTACTGGGAGACCGGGTCCTCTCAAAGAGTaGGTCAGGCTGGGCGTCGGA +
Preference number: 2 (lower is better)
Translates to: KPCLWFLRPPEPFCTGRPGPLKE*VRLGVG
Trigger: TCCGACGCCCAGCCTGACGCACTCTTTGAGAGGACC...CGGTCTCCCAGTACAGAAGGGCTCAGGAGGCCTCAGAAACCAAAGACAAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp ACCTGGTTCTGCTCCTCCCAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGGTGGTGGCACGTTTGTaGGGGTCAGGCTCGAAACAG +
Preference number: 2 (lower is better)
Translates to: TWFCSSQRILYRMARRSLVVARL*GSGSKQ
Trigger: CTGTTTCGAGCCTGACCCCCACAAACGTGCCACCAC...CAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTGGGAGGAGCAGAACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR TCA 90 bp ACCGCGGCCTGCACCGCTCGGCGGATGATGTTGTCCATCGCGAACATCCAGTGGTCTCCGGGATTTCTTTaGTGGCTATTCGCACTTGAT +
Preference number: 2 (lower is better)
Translates to: TAACTARRMMLSIANIQWSPGFL*WLFALD
Trigger: ATCAAGTGCGAATAGCCATCAAAGAAATCCCGGAGA...CCACTGGATGTTCGCGATGGACAACATCATCCGCCGAGCGGTGCAGGCCGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR TCA 90 bp GATATTGTGGTCGCCATCACCCGGTGCTCTGGGGAGCGGATGAAGTCCCTCAGGGACCTTCTGAGGGCTTaGAGGCAATTCGGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: DIVVAITRCSGERMKSLRDLLRA*RQFGSS
Trigger: AGAAGAACCGAATTGCCTTCAAGCCCTCAGAAGGTC...CCTGAGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR TCA 90 bp AAGCCTTGTCTTTGGTTTCTGAGGCCTCCTGAGCCCTTCTGTACTGGGAGACCGCCGGTCTTCCAAGGCTaGGCTCTCGTCTGGAACACT +
Preference number: 2 (lower is better)
Translates to: KPCLWFLRPPEPFCTGRPPVFQG*ALVWNT
Trigger: AGTGTTCCAGACGAGAGCTCAGCCTTGGAAGACCGG...CGGTCTCCCAGTACAGAAGGGCTCAGGAGGCCTCAGAAACCAAAGACAAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp GATATTGTGGTCGCCATCACCCGGTGCTCTGGGGAGCGGATGAAGTCCCTCAGGGTCAATTATCTCAGGTaGCATGTACTGCAGGGTGCC +
Preference number: 2 (lower is better)
Translates to: DIVVAITRCSGERMKSLRVNYLR*HVLQGA
Trigger: GGCACCCTGCAGTACATGGCACCTGAGATAATTGAC...CCTGAGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp TGTACTGGGAGACCGCACTCCAGAGTCTGCAGAGGAGACCACCCCGTAGTCGAAGAAGCCACCTGGTTCTaGTCCTCCCAGAGGATTTTG +
Preference number: 2 (lower is better)
Translates to: CTGRPHSRVCRGDHPVVEEATWF*SSQRIL
Trigger: CAAAATCCTCTGGGAGGAGCAGAACCAGGTGGCTTC...TTCGACTACGGGGTGGTCTCCTCTGCAGACTCTGGAGTGCGGTCTCCCAGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR TCA 90 bp GGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGCTCCTCGTGCAGAGGCTaGGAATACCTGCTATCTCTC +
Preference number: 2 (lower is better)
Translates to: GFCTGWHGAHCPCVAGRGSSCRG*EYLLSL
Trigger: GAGAGATAGCAGGTATTCTCAGCCTCTGCACGAGGA...GCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR TCA 90 bp TGTACTGGGAGACCGCACTCCAGAGTCTGCAGAGGAGACCACCCCGTAGTCGAAAGTCCAGGTCCACCTTaGGCTTTGATATTGTGGTCG +
Preference number: 2 (lower is better)
Translates to: CTGRPHSRVCRGDHPVVESPGPP*ALILWS
Trigger: CGACCACAATATCAAAGCTCAAGGTGGACCTGGACT...TTCGACTACGGGGTGGTCTCCTCTGCAGACTCTGGAGTGCGGTCTCCCAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp CAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGCGTGGTGGGACACTCTaGCACAGCTTAGCTGATTGG +
Preference number: 2 (lower is better)
Translates to: QRILYRMARRSLSLRSRKRGGTL*HSLADW
Trigger: CCAATCAGCTAAGCTGTGGCAGAGTGTCCCACCACG...CTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp TGTACTGGGAGACCGCACTCCAGAGTCTGCAGAGGAGACCACCCCGTAGTCGAACCAGCTCCACCGTACTaGCTGCTGTATTGGTTATCA +
Preference number: 2 (lower is better)
Translates to: CTGRPHSRVCRGDHPVVEPAPPY*LLYWLS
Trigger: TGATAACCAATACAGCAGGCAGTACGGTGGAGCTGG...TTCGACTACGGGGTGGTCTCCTCTGCAGACTCTGGAGTGCGGTCTCCCAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 90 bp TGCCTTAAGAAACCCTCTCTCAGTAGCTCAGCAGTGGTGGCACGTTaGTGGGGGTCAGGCTCGAAACAGGATAAAATGAAGGCTCGGGCT +
Preference number: 2 (lower is better)
Translates to: CLKKPSLSSSAVVAR*WGSGSKQDKMKARA
Trigger: AGCCCGAGCCTTCATTTTATCCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTACTGAGAGAGGGTTTCTTAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 90 bp CGGGGACCTTCTGAGGGCTTGAAGGCAATTCGGTTCTTCTTGCCCTaGTTCACCTGCCTTAAGAAACCCTCTCTCAGTAGCTCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: RGPSEGLKAIRFFLP*FTCLKKPSLSSSAV
Trigger: CACTGCTGAGCTACTGAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCTTCAAGCCCTCAGAAGGTCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 90 bp ACACCGCGGGGACCTTCTGAGGGCTTGAAGGCAATTCGGTTCTTCTaGCCCTTGTTCACCTGCCTTAAGAAACCCTCTCTCAGTAGCTCA +
Preference number: 2 (lower is better)
Translates to: TPRGPSEGLKAIRFF*PLFTCLKKPSLSSS
Trigger: TGAGCTACTGAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCTTCAAGCCCTCAGAAGGTCCCCGCGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 90 bp TGCTCTGGGGAGCGGATGAAGTCCCTCAGGATCCCAATGATTTGCTaGATGTGTCCAACTGAGAGATGCAACTCTTCGGAACTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: CSGERMKSLRIPMIC*MCPTERCNSSELWA
Trigger: GGCCCAGAGTTCCGAAGAGTTGCATCTCTCAGTTGGACACATCAAGCAAATCATTGGGATCCTGAGGGACTTCATCCGCTCCCCAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR TCA 90 bp CAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGACAGAGCCCAGGTACTaGACGATATTGCGGTGCTTA +
Preference number: 2 (lower is better)
Translates to: QRILYRMARRSLSLRSRKTEPRY*TILRCL
Trigger: TAAGCACCGCAATATCGTTCAGTACCTGGGCTCTGT...CTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGATTGAACATGGCTGCCTaGGGCTCACCAAGCTCATGG +
Preference number: 2 (lower is better)
Translates to: GSKQDKMKARASAERASGLNMAA*GSPSSW
Trigger: CCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAA...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp AAGCCTTGTCTTTGGTTTCTGAGGCCTCCTGAGCCCTTCTGTACTGGGAGACCGCCCGTAGGGGCCTGCTaGGTTCTCTGTAATACAATT +
Preference number: 2 (lower is better)
Translates to: KPCLWFLRPPEPFCTGRPPVGAC*VLCNTI
Trigger: AATTGTATTACAGAGAACCCAGCAGGCCCCTACGGG...CGGTCTCCCAGTACAGAAGGGCTCAGGAGGCCTCAGAAACCAAAGACAAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGAAAACATGTAGCGTGGTaGGACACTCTGCCACAGCTT +
Preference number: 2 (lower is better)
Translates to: GSKQDKMKARASAERASGKHVAW*DTLPQL
Trigger: AAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTT...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp GGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGCAAGAGAAAAATCTACTaGACTGCTCTTCGGTGGAAA +
Preference number: 2 (lower is better)
Translates to: GFCTGWHGAHCPCVAGRGKRKIY*TALRWK
Trigger: TTTCCACCGAAGAGCAGTGCAGTAGATTTTTCTCTT...GCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp AATTTCCTAATATTCCGGGAGGTCAAAACCAAGGCTCACTGTTTTCACAATACACAGAGCCGTGCTCGCTaGTGCTGGTGGCCATGGGCT +
Preference number: 2 (lower is better)
Translates to: NFLIFREVKTKAHCFHNTQSRAR*CWWPWA
Trigger: AGCCCATGGCCACCAGCAGCAGCGAGCACGGCTCTG...TGTATTGTGAAAACAGTGAGCCTTGGTTTTGACCTCCCGGAATATTAGGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp GTTTCGAGGTTCCAAAATCGGAGATTTTCACCACTCCGCTGTAGGTGTTCACCATGCTTAAGGTACTTGTaGAGGGCTATCTCCTCGTGC +
Preference number: 2 (lower is better)
Translates to: VSRFQNRRFSPLRCRCSPCLRYL*RAISSC
Trigger: GCACGAGGAGATAGCCCTGCACAAGTACCTTAAGCA...TGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTGGAACCTCGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp AAGCCTTGTCTTTGGTTTCTGAGGCCTCCTGAGCCCTTCTGTACTGGGAGACCGTCACCATTTGCATCATaGTCATACTCATACTCCAAG +
Preference number: 2 (lower is better)
Translates to: KPCLWFLRPPEPFCTGRPSPFAS*SYSYSK
Trigger: CTTGGAGTATGAGTATGACCATGATGCAAATGGTGA...CGGTCTCCCAGTACAGAAGGGCTCAGGAGGCCTCAGAAACCAAAGACAAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 90 bp ACACAATCCCATACGTGCCTTTCCCCAAGACAACTCTCTCACCATTaGCATCATGGTCATACTCATACTCCAAGGTGTCTCCATCGGTCT +
Preference number: 2 (lower is better)
Translates to: TQSHTCLSPRQLSHH*HHGHTHTPRCLHRS
Trigger: AGACCGATGGAGACACCTTGGAGTATGAGTATGACCATGATGCAAATGGTGAGAGAGTTGTCTTGGGGAAAGGCACGTATGGGATTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp TTTTCACCACTCCGCTGTAGGTGTTCACCAGAACATTATCGCCCTTTATGTCTCACAAAACATGTAGCGTaGTGGGACACTCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: FSPLRCRCSPEHYRPLCLTKHVA*WDTLPQ
Trigger: CTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGT...GAGACATAAAGGGCGATAATGTTCTGGTGAACACCTACAGCGGAGTGGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp CAGGTACTGAACGATATTGCGGTGCTTAAGGTACTTGTGCAGGGCTATCTCCTCAACTCTCTCACCATTTaGATCATGGTCATACTCATA +
Preference number: 2 (lower is better)
Translates to: QVLNDIAVLKVLVQGYLLNSLTI*IMVILI
Trigger: TATGAGTATGACCATGATGCAAATGGTGAGAGAGTT...GAGGAGATAGCCCTGCACAAGTACCTTAAGCACCGCAATATCGTTCAGTACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp GTTTCGAGGTTCCAAAATCGGAGATTTTCACCACTCCGCTGTAGGTGTTCACCATGCACTGCTCTTCGGTaGAAAAGTAGATTTGAAAGT +
Preference number: 2 (lower is better)
Translates to: VSRFQNRRFSPLRCRCSPCTALR*KSRFES
Trigger: ACTTTCAAATCTACTTTTCCACCGAAGAGCAGTGCA...TGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTGGAACCTCGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CCA 90 bp AATTTCCTAATATTCCGGGAGGTCAAAACCAAGGCTCACTGTTTTCACAATACAGGATTTTGTACAGGATaGCACGGCGCTCACTGTCCT +
Preference number: 2 (lower is better)
Translates to: NFLIFREVKTKAHCFHNTGFCTG*HGAHCP
Trigger: AGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC...TGTATTGTGAAAACAGTGAGCCTTGGTTTTGACCTCCCGGAATATTAGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR TCA 90 bp TCTTCAACAATCTTTTCAATTGTCTTTGCATCAGCTCCTTGCAGCCGCAACCAGGTTTGGTGTAAAACTTaGTTGTCGGTTCCTTCATCG +
Preference number: 2 (lower is better)
Translates to: SSTIFSIVFASAPCSRNQVWCKT*LSVPSS
Trigger: CGATGAAGGAACCGACAATCAAGTTTTACACCAAAC...CTGGTTGCGGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAGATTGTTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp TTTGATGGCTATTCGCACTTGATTGCTCAGATCTCGGCCAGCATACACAATCCCGTAAAATTCCATTCGTaGATCTGTTTCATTTCTGTG +
Preference number: 2 (lower is better)
Translates to: FDGYSHLIAQISASIHNPVKFHS*ICFISV
Trigger: CACAGAAATGAAACAGATGCACGAATGGAATTTTAC...GGGATTGTGTATGCTGGCCGAGATCTGAGCAATCAAGTGCGAATAGCCATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp AATTTCCTAATATTCCGGGAGGTCAAAACCAAGGCTCACTGTTTTCACAATACATTGCCCTTGTTCACCTaGCTTAAGAAACCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: NFLIFREVKTKAHCFHNTLPLFT*LKKPSL
Trigger: GAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAA...TGTATTGTGAAAACAGTGAGCCTTGGTTTTGACCTCCCGGAATATTAGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp AATTTCCTAATATTCCGGGAGGTCAAAACCAAGGCTCACTGTTTTCACAATACACTTTTCAATTGTCTTTaGATCAGCTCCTTGCAGCCG +
Preference number: 2 (lower is better)
Translates to: NFLIFREVKTKAHCFHNTLFNCL*ISSLQP
Trigger: CGGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAG...TGTATTGTGAAAACAGTGAGCCTTGGTTTTGACCTCCCGGAATATTAGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR GCA 90 bp TCATCAAACTTTGATAGGCTTATTCCCTTTATGGAAGAGGCTGTAAAATTCCATTCTGTGGGTGAGACATaGCATAAAGAAACTGTTCTC +
Preference number: 2 (lower is better)
Translates to: SSNFDRLIPFMEEAVKFHSVGET*HKETVL
Trigger: GAGAACAGTTTCTTTATGGCATGTCTCACCCACAGA...ATGGAATTTTACAGCCTCTTCCATAAAGGGAATAAGCCTATCAAAGTTTGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp GCTCGCTGCTGCTGGTGGCCATGGGCTCTCCCTGTGTaGGCAGGGCCAGGACGACACCGCGGGGACCTTCTG +
Preference number: 3 (lower is better)
Translates to: ARCCWWPWALPV*AGPGRHRGDLL
Trigger: CAGAAGGTCCCCGCGGTGTCGTCCTGGCCCTGCCCACACAGGGAGAGCCCATGGCCACCAGCAGCAGCGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp CGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGCCCTaGTCCCTGTCCTCCGGGGACGAGGCCAAGCCCCGG +
Preference number: 3 (lower is better)
Translates to: RRSLSLRSRKRP*SLSSGDEAKPR
Trigger: CCGGGGCTTGGCCTCGTCCCCGGAGGACAGGGACCAGGGCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp GGGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTaGTGCTGGTGGCCATGGGCTCTCCCTGTGTGGGCA +
Preference number: 3 (lower is better)
Translates to: GRRSLGRQSRAR*CWWPWALPVWA
Trigger: TGCCCACACAGGGAGAGCCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp GGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATaGGCTCTCCCTGTGTGGGCAGGGCCAGGACGACAC +
Preference number: 3 (lower is better)
Translates to: GRQSRARCCWWP*ALPVWAGPGRH
Trigger: GTGTCGTCCTGGCCCTGCCCACACAGGGAGAGCCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp CTGGGCGCCCGGGTCCTCTCAAAGAGTGCGTCAGGCTaGGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCG +
Preference number: 3 (lower is better)
Translates to: LGARVLSKSASG*ASESGETEPCS
Trigger: CGAGCACGGCTCTGTCTCCCCAGACTCCGACGCCCAGCCTGACGCACTCTTTGAGAGGACCCGGGCGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp CCTCTCAAAGAGTGCGTCAGGCTGGGCGTCGGAGTCTaGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGC +
Preference number: 3 (lower is better)
Translates to: PLKECVRLGVGV*GDRAVLAAAGG
Trigger: GCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCCCAGCCTGACGCACTCTTTGAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 72 bp CTCCGGGGACGAGGCCAAGCCCCGGTCTTCCAAGGCTaGGCTCTCGTCTGGAACACTGAGGAGGTGGCCAAG +
Preference number: 3 (lower is better)
Translates to: LRGRGQAPVFQG*ALVWNTEEVAK
Trigger: CTTGGCCACCTCCTCAGTGTTCCAGACGAGAGCTCAGCCTTGGAAGACCGGGGCTTGGCCTCGTCCCCGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp GCTCGGAGCTCTGGGATGAGAATGGTGACCGCGGCCTaGACCGCTCGGCGGATGATGTTGTCCATCGCGAAC +
Preference number: 3 (lower is better)
Translates to: ARSSGMRMVTAA*TARRMMLSIAN
Trigger: GTTCGCGATGGACAACATCATCCGCCGAGCGGTGCAGGCCGCGGTCACCATTCTCATCCCAGAGCTCCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp AAAAGTCTGTTGGTCTCCTGTCTGAGCTCACCCAGCTaGAGGCTCAGGTGCTGCTGGTGGGGCTGGGCCTCC +
Preference number: 3 (lower is better)
Translates to: KSLLVSCLSSPS*RLRCCWWGWAS
Trigger: GGAGGCCCAGCCCCACCAGCAGCACCTGAGCCTCCAGCTGGGTGAGCTCAGACAGGAGACCAACAGACTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp GGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTaGGTAGCAGGAAGAGGCCCTGGTCCCTGTCCTCCG +
Preference number: 3 (lower is better)
Translates to: GFCTGWHGAHCP*VAGRGPGPCPP
Trigger: CGGAGGACAGGGACCAGGGCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CAA 90 bp ACCGCGGCCTGCACCGCTCGGCGGATGATGTTGTCCATCGCGAACATCCAGTGGGGACCTTCTGAGGGCTaGAAGGCAATTCGGTTCTTC +
Preference number: 3 (lower is better)
Translates to: TAACTARRMMLSIANIQWGPSEG*KAIRFF
Trigger: GAAGAACCGAATTGCCTTCAAGCCCTCAGAAGGTCC...CCACTGGATGTTCGCGATGGACAACATCATCCGCCGAGCGGTGCAGGCCGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CAA 90 bp CATGCCCACTTTGAACATGGCTGCCTGCGGCTCACCAAGCTCATGGAACGGAGGCGGTGCTTAAGGTACTaGTGCAGGGCTATCTCCTCG +
Preference number: 3 (lower is better)
Translates to: HAHFEHGCLRLTKLMERRRCLRY*CRAISS
Trigger: CGAGGAGATAGCCCTGCACAAGTACCTTAAGCACCG...CCTCCGTTCCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAGTGGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp GCCACACACTCCTGCAGGTTGGAAGCCACCTGGTTCTaGTCCTCCCAGAGGATTTTGTACAGGATGGCACGG +
Preference number: 3 (lower is better)
Translates to: ATHSCRLEATWF*SSQRILYRMAR
Trigger: CCGTGCCATCCTGTACAAAATCCTCTGGGAGGAGCAGAACCAGGTGGCTTCCAACCTGCAGGAGTGTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CAA 90 bp AAGCCTTGTCTTTGGTTTCTGAGGCCTCCTGAGCCCTTCTGTACTGGGAGACCGGCTCGGCGGATGATGTaGTCCATCGCGAACATCCAG +
Preference number: 3 (lower is better)
Translates to: KPCLWFLRPPEPFCTGRPARRMM*SIANIQ
Trigger: CTGGATGTTCGCGATGGACAACATCATCCGCCGAGC...CGGTCTCCCAGTACAGAAGGGCTCAGGAGGCCTCAGAAACCAAAGACAAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 72 bp GGACGAGCTGTCAAAGTCCAGGTCCACCTTGAGCTTTaGTATTGTGGTCGCCATCACCCGGTGCTCTGGGGA +
Preference number: 3 (lower is better)
Translates to: GRAVKVQVHLEL*YCGRHHPVLWG
Trigger: TCCCCAGAGCACCGGGTGATGGCGACCACAATATCAAAGCTCAAGGTGGACCTGGACTTTGACAGCTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp ACCTTGAGCTTTGATATTGTGGTCGCCATCACCCGGTaGTCTGGGGAGCGGATGAAGTCCCTCAGGATCCCA +
Preference number: 3 (lower is better)
Translates to: TLSFDIVVAITR*SGERMKSLRIP
Trigger: TGGGATCCTGAGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATCAAAGCTCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp GAGCCCTTCTGTACTGGGAGACCGCACTCCAGAGTCTaGAGAGGAGACCACCCCGTAGTCGAAGGTATCTTA +
Preference number: 3 (lower is better)
Translates to: EPFCTGRPHSRV*RGDHPVVEGIL
Trigger: TAAGATACCTTCGACTACGGGGTGGTCTCCTCTGCAGACTCTGGAGTGCGGTCTCCCAGTACAGAAGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp CAGATATCGGCTGGGGCACCATATCCGCGAGGCCCTTaGTCAATTATCTCAGGTGCCATGTACTGCAGGGTG +
Preference number: 3 (lower is better)
Translates to: QISAGAPYPRGP*SIISGAMYCRV
Trigger: CACCCTGCAGTACATGGCACCTGAGATAATTGACCAAGGGCCTCGCGGATATGGTGCCCCAGCCGATATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp CCTGCCTTAAGAAACCCTCTCTCAGTAGCTCAGCAGTaGTGGCACGTTTGTGGGGGTCAGGCTCGAAACAGG +
Preference number: 3 (lower is better)
Translates to: PALRNPLSVAQQ*WHVCGGQARNR
Trigger: CCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTACTGAGAGAGGGTTTCTTAAGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CAA 90 bp ACCGCGGCCTGCACCGCTCGGCGGATGATGTTGTCCATCGCGAACATCCAGTGGATCCCAATGATTTGCTaGATGTGTCCAACTGAGAGA +
Preference number: 3 (lower is better)
Translates to: TAACTARRMMLSIANIQWIPMIC*MCPTER
Trigger: TCTCTCAGTTGGACACATCAAGCAAATCATTGGGAT...CCACTGGATGTTCGCGATGGACAACATCATCCGCCGAGCGGTGCAGGCCGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 72 bp CAACTAGGTGTTCCAAAAGTCTGTTGGTCTCCTGTCTaGGCTCACCCAGCTGGAGGCTCAGGTGCTGCTGGT +
Preference number: 3 (lower is better)
Translates to: QLGVPKVCWSPV*AHPAGGSGAAG
Trigger: ACCAGCAGCACCTGAGCCTCCAGCTGGGTGAGCTCAGACAGGAGACCAACAGACTTTTGGAACACCTAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp TTATCTACCCCTTCAGTCTCACAGGTAGGCTCAAAGTaGGCTCGGAGCTCTGGGATGAGAATGGTGACCGCG +
Preference number: 3 (lower is better)
Translates to: LSTPSVSQVGSK*ARSSGMRMVTA
Trigger: CGCGGTCACCATTCTCATCCCAGAGCTCCGAGCCCACTTTGAGCCTACCTGTGAGACTGAAGGGGTAGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 72 bp TGGTATCAAGCCTTGTCTTTGGTTTCTGAGGCCTCCTaGGCCCTTCTGTACTGGGAGACCGCACTCCAGAGT +
Preference number: 3 (lower is better)
Translates to: WYQALSLVSEAS*ALLYWETALQS
Trigger: ACTCTGGAGTGCGGTCTCCCAGTACAGAAGGGCTCAGGAGGCCTCAGAAACCAAAGACAAGGCTTGATACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp TGGATCTTAAACATGCCCACTTTGAACATGGCTGCCTaGGGCTCACCAAGCTCATGGAACGGAGGCTTGCTG +
Preference number: 3 (lower is better)
Translates to: WILNMPTLNMAA*GSPSSWNGGLL
Trigger: CAGCAAGCCTCCGTTCCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAGTGGGCATGTTTAAGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp AGGGTGGATCTTAAACATGCCCACTTTGAACATGGCTaGCTGCGGCTCACCAAGCTCATGGAACGGAGGCTT +
Preference number: 3 (lower is better)
Translates to: RVDLKHAHFEHG*LRLTKLMERRL
Trigger: AAGCCTCCGTTCCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAGTGGGCATGTTTAAGATCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp CCCTCTCTCAGTAGCTCAGCAGTGGTGGCACGTTTGTaGGGGTCAGGCTCGAAACAGGATAAAATGAAGGCT +
Preference number: 3 (lower is better)
Translates to: PSLSSSAVVARL*GSGSKQDKMKA
Trigger: AGCCTTCATTTTATCCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTACTGAGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp GCCTTAAGAAACCCTCTCTCAGTAGCTCAGCAGTGGTaGCACGTTTGTGGGGGTCAGGCTCGAAACAGGATA +
Preference number: 3 (lower is better)
Translates to: ALRNPLSVAQQW*HVCGGQARNRI
Trigger: TATCCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTACTGAGAGAGGGTTTCTTAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 72 bp CACGTTTGTGGGGGTCAGGCTCGAAACAGGATAAAATaGAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGAA +
Preference number: 3 (lower is better)
Translates to: HVCGGQARNRIK*RLGLQLKGLLE
Trigger: TTCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCCTGACCCCCACAAACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp CGGGCTTCAGCTGAAAGGGCTTCTGGAATCTCAGGGTaGATCTTAAACATGCCCACTTTGAACATGGCTGCC +
Preference number: 3 (lower is better)
Translates to: RASAERASGISG*ILNMPTLNMAA
Trigger: GGCAGCCATGTTCAAAGTGGGCATGTTTAAGATCCACCCTGAGATTCCAGAAGCCCTTTCAGCTGAAGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CAA 90 bp AAGCCTTGTCTTTGGTTTCTGAGGCCTCCTGAGCCCTTCTGTACTGGGAGACCGCGGTTCTTCTTGCCCTaGTTCACCTGCCTTAAGAAA +
Preference number: 3 (lower is better)
Translates to: KPCLWFLRPPEPFCTGRPRFFLP*FTCLKK
Trigger: TTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCG...CGGTCTCCCAGTACAGAAGGGCTCAGGAGGCCTCAGAAACCAAAGACAAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CAA 90 bp GGTCTCTCCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTGAAGGCTGGTACACTTaGGTTGGCTCTATGACCAGA +
Preference number: 3 (lower is better)
Translates to: GLSLQLHRTACCIGYHLFEGWYT*VGSMTR
Trigger: TCTGGTCATAGAGCCAACCAAAGTGTACCAGCCTTC...AAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp ACCATATCCGCGAGGCCCTTGGTCAATTATCTCAGGTaGCATGTACTGCAGGGTGCCAGTAAAAGTCTCTGT +
Preference number: 3 (lower is better)
Translates to: TISARPLVNYLR*HVLQGASKSLC
Trigger: ACAGAGACTTTTACTGGCACCCTGCAGTACATGGCACCTGAGATAATTGACCAAGGGCCTCGCGGATATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp GGGGAGCGGATGAAGTCCCTCAGGATCCCAATGATTTaGTTGATGTGTCCAACTGAGAGATGCAACTCTTCG +
Preference number: 3 (lower is better)
Translates to: GERMKSLRIPMI*LMCPTERCNSS
Trigger: CGAAGAGTTGCATCTCTCAGTTGGACACATCAAGCAAATCATTGGGATCCTGAGGGACTTCATCCGCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CAA 90 bp GTTTCGAGGTTCCAAAATCGGAGATTTTCACCACTCCGCTGTAGGTGTTCACCATTCATCGGCCCCCATTaGGATCGCAGAAGAGCAGAA +
Preference number: 3 (lower is better)
Translates to: VSRFQNRRFSPLRCRCSPFIGPH*DRRRAE
Trigger: TTCTGCTCTTCTGCGATCCAAATGGGGGCCGATGAA...TGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTGGAACCTCGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 72 bp CCTCAGGATCCCAATGATTTGCTTGATGTGTCCAACTaGGAGATGCAACTCTTCGGAACTCTGGGCCACACA +
Preference number: 3 (lower is better)
Translates to: PQDPNDLLDVSN*EMQLFGTLGHT
Trigger: TGTGTGGCCCAGAGTTCCGAAGAGTTGCATCTCTCAGTTGGACACATCAAGCAAATCATTGGGATCCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp TCCATCGGTCTCTCCCTCCAGCTCCACCGTACTGCCTaGTGTATTGGTTATCATCTCTTTGACCAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: SIGLSLQLHRTA*CIGYHLFDQRE
Trigger: TTCTCTTTGGTCAAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACCGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp TGCTCAGATCTCGGCCAGCATACACAATCCCATACGTaGCTTTCCCCAAGACAACTCTCTCACCATTTGCAT +
Preference number: 3 (lower is better)
Translates to: CSDLGQHTQSHT*LSPRQLSHHLH
Trigger: ATGCAAATGGTGAGAGAGTTGTCTTGGGGAAAGGCACGTATGGGATTGTGTATGCTGGCCGAGATCTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp ATCCCAATGATTTGCTTGATGTGTCCAACTGAGAGATaGAACTCTTCGGAACTCTGGGCCACACACTCCTGC +
Preference number: 3 (lower is better)
Translates to: IPMICLMCPTER*NSSELWATHSC
Trigger: GCAGGAGTGTGTGGCCCAGAGTTCCGAAGAGTTGCATCTCTCAGTTGGACACATCAAGCAAATCATTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CAA 90 bp TTTTCACCACTCCGCTGTAGGTGTTCACCAGAACATTATCGCCCTTTATGTCTCGATGGCTATTCGCACTaGATTGCTCAGATCTCGGCC +
Preference number: 3 (lower is better)
Translates to: FSPLRCRCSPEHYRPLCLDGYSH*IAQISA
Trigger: GGCCGAGATCTGAGCAATCAAGTGCGAATAGCCATC...GAGACATAAAGGGCGATAATGTTCTGGTGAACACCTACAGCGGAGTGGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 72 bp TCTCTCTCCGGGATTTCTTTGATGGCTATTCGCACTTaGTTGCTCAGATCTCGGCCAGCATACACAATCCCA +
Preference number: 3 (lower is better)
Translates to: SLSGISLMAIRT*LLRSRPAYTIP
Trigger: TGGGATTGTGTATGCTGGCCGAGATCTGAGCAATCAAGTGCGAATAGCCATCAAAGAAATCCCGGAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 72 bp GCTGAGAATACCTGCTATCTCTCTCCGGGATTTCTTTaGTGGCTATTCGCACTTGATTGCTCAGATCTCGGC +
Preference number: 3 (lower is better)
Translates to: AENTCYLSPGFL*WLFALDCSDLG
Trigger: GCCGAGATCTGAGCAATCAAGTGCGAATAGCCATCAAAGAAATCCCGGAGAGAGATAGCAGGTATTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp TTGAAGGCAATTCGGTTCTTCTTGCCCTTGTTCACCTaGCTTAAGAAACCCTCTCTCAGTAGCTCAGCAGTG +
Preference number: 3 (lower is better)
Translates to: LKAIRFFLPLFT*LKKPSLSSSAV
Trigger: CACTGCTGAGCTACTGAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp GGCTGGTACACTTTGGTTGGCTCTATGACCAGAACCTaGTTAGAGATTACGCGGTTGTCTGCTCCATTATTT +
Preference number: 3 (lower is better)
Translates to: GWYTLVGSMTRT*LEITRLSAPLF
Trigger: AAATAATGGAGCAGACAACCGCGTAATCTCTAACCAGGTTCTGGTCATAGAGCCAACCAAAGTGTACCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CAA 90 bp TCTTCAACAATCTTTTCAATTGTCTTTGCATCAGCTCCTTGCAGCCGCAACCAGTGTTCCAAAAGTCTGTaGGTCTCCTGTCTGAGCTCA +
Preference number: 3 (lower is better)
Translates to: SSTIFSIVFASAPCSRNQCSKSL*VSCLSS
Trigger: TGAGCTCAGACAGGAGACCAACAGACTTTTGGAACA...CTGGTTGCGGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAGATTGTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 72 bp CCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTaGCCAAAGAGAAAAATCTACTGCACTGCTCTTCGG +
Preference number: 3 (lower is better)
Translates to: PPYCLLYWLSSL*PKRKIYCTALR
Trigger: CCGAAGAGCAGTGCAGTAGATTTTTCTCTTTGGTCAAAGAGATGATAACCAATACAGCAGGCAGTACGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR-3UTR CAA 90 bp TCTTCAACAATCTTTTCAATTGTCTTTGCATCAGCTCCTTGCAGCCGCAACCAGGTACTGCCTGCTGTATaGGTTATCATCTCTTTGACC +
Preference number: 3 (lower is better)
Translates to: SSTIFSIVFASAPCSRNQVLPAV*VIISLT
Trigger: GGTCAAAGAGATGATAACCAATACAGCAGGCAGTAC...CTGGTTGCGGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAGATTGTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 72 bp CAAGGCACATTCGTATCAGTTTTGTGTTTCTCAAATTaGAGTACCATACCAGTTCTGAGGCAGTGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: QGTFVSVLCFSN*STIPVLRQCPS
Trigger: GCTGGGACACTGCCTCAGAACTGGTATGGTACTTCAATTTGAGAAACACAAAACTGATACGAATGTGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp GTTTATGGAAACATAAGAAGGCTGGTACACTTTGGTTaGCTCTATGACCAGAACCTGGTTAGAGATTACGCG +
Preference number: 3 (lower is better)
Translates to: VYGNIRRLVHFG*LYDQNLVRDYA
Trigger: CGCGTAATCTCTAACCAGGTTCTGGTCATAGAGCCAACCAAAGTGTACCAGCCTTCTTATGTTTCCATAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR GCA 72 bp TCAACAATCTTTTCAATTGTCTTTGCATCAGCTCCTTaGAGCCGCAACCAGTCTATAAGCTCTTTATCTGTT +
Preference number: 3 (lower is better)
Translates to: STIFSIVFASAP*SRNQSISSLSV
Trigger: AACAGATAAAGAGCTTATAGACTGGTTGCGGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAGATTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CCA 72 bp ATAAAGAAACTGTTCTCTCCTCGGCTTCATTGTTTATaGAAACATAAGAAGGCTGGTACACTTTGGTTGGCT +
Preference number: 3 (lower is better)
Translates to: IKKLFSPRLHCL*KHKKAGTLWLA
Trigger: AGCCAACCAAAGTGTACCAGCCTTCTTATGTTTCCATAAACAATGAAGCCGAGGAGAGAACAGTTTCTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR TCA 72 bp TTTTGTGTTTCTCAAATTGAAGTACCATACCAGTTCTaGGGCAGTGTCCCAGCTTCCATGTTTGTTAAATAC +
Preference number: 3 (lower is better)
Translates to: FCVSQIEVPYQF*GSVPASMFVKY
Trigger: GTATTTAACAAACATGGAAGCTGGGACACTGCCTCAGAACTGGTATGGTACTTCAATTTGAGAAACACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp CTGGGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGGCCAAGGTGGTGCCTaGGCGCCCGGGTCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LGVGVWGDRAVLAAAGGHGQGGA*APGSSQ
Trigger: TTGAGAGGACCCGGGCGCCCAGGCACCACCTTGGCC...ATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGGGGCAGAACCTGGAGCATaGTCTGCAGAGCCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: GVGVWGDRAVLAAAGGHGAEPGA*SAEPSH
Trigger: GTGAGAAGGCTCTGCAGATCATGCTCCAGGTTCTGC...CCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp TGTACTGGGAGACCGCACTCCAGAGTCTGCAGAGGAGACCACCCCGTAGTCGAAAGGTGGCCAAGGTGGTaGCTGGGCGCCCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CTGRPHSRVCRGDHPVVERWPRW*LGARVL
Trigger: GAGGACCCGGGCGCCCAGGCACCACCTTGGCCACCT...TTCGACTACGGGGTGGTCTCCTCTGCAGACTCTGGAGTGCGGTCTCCCAGTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GATATTGTGGTCGCCATCACCCGGTGCTCTGGGGAGCGGATGAAGTCCCTCAGGGCCAGGTCCGGTGGCTaGGGGATAGCCCTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: DIVVAITRCSGERMKSLRARSGG*GIALFR
Trigger: GCGGAAGAGGGCTATCCCCCAGCCACCGGACCTGGC...CCTGAGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGGGTTTGAACAACCTCTCTaGTGCCTGGACGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GVGVWGDRAVLAAAGGHGFEQPL*CLDGFP
Trigger: GGGAAAGCCGTCCAGGCAGCAGAGAGGTTGTTCAAA...CCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGCAGGAGGTGGCCAAGGTaGTGCCTGGGCGCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: GFCTGWHGAHCPCVAGRGRRWPR*CLGARV
Trigger: GACCCGGGCGCCCAGGCACCACCTTGGCCACCTCCT...GCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGGGCCAGCTCCACCGTACTaGCTGCTGTATTGGTTATCA +
Preference number: 4 (lower is better)
Translates to: GVGVWGDRAVLAAAGGHGPAPPY*LLYWLS
Trigger: TGATAACCAATACAGCAGGCAGTACGGTGGAGCTGG...CCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp CATGCCCACTTTGAACATGGCTGCCTGCGGCTCACCAAGCTCATGGAACGGAGGATGGTGACCGCGGCCTaGACCGCTCGGCGGATGATG +
Preference number: 4 (lower is better)
Translates to: HAHFEHGCLRLTKLMERRMVTAA*TARRMM
Trigger: CATCATCCGCCGAGCGGTGCAGGCCGCGGTCACCAT...CCTCCGTTCCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAGTGGGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GATATTGTGGTCGCCATCACCCGGTGCTCTGGGGAGCGGATGAAGTCCCTCAGGAAGAGTGCGTCAGGCTaGGCGTCGGAGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: DIVVAITRCSGERMKSLRKSASG*ASESGE
Trigger: CTCCCCAGACTCCGACGCCCAGCCTGACGCACTCTT...CCTGAGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGGGAAACATGTAGCGTGGTaGGACACTCTGCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: GVGVWGDRAVLAAAGGHGKHVAW*DTLPQL
Trigger: AAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTT...CCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGGGCTCCACCGTACTGCCTaGTGTATTGGTTATCATCTC +
Preference number: 4 (lower is better)
Translates to: GVGVWGDRAVLAAAGGHGLHRTA*CIGYHL
Trigger: GAGATGATAACCAATACAGCAGGCAGTACGGTGGAG...CCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp ACCGCGGCCTGCACCGCTCGGCGGATGATGTTGTCCATCGCGAACATCCAGTGGCGTGGTGGGACACTCTaGCACAGCTTAGCTGATTGG +
Preference number: 4 (lower is better)
Translates to: TAACTARRMMLSIANIQWRGGTL*HSLADW
Trigger: CCAATCAGCTAAGCTGTGGCAGAGTGTCCCACCACG...CCACTGGATGTTCGCGATGGACAACATCATCCGCCGAGCGGTGCAGGCCGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GGTCTCTCCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTTGGGGCTGGGCCTCCTaGCCAGGTCCGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLSLQLHRTACCIGYHLFWGWAS*PGPVAG
Trigger: CCCAGCCACCGGACCTGGCCAGGAGGCCCAGCCCCA...AAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp CAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGGCTCGCTGCTGCTGGTaGCCATGGGCTCTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: QRILYRMARRSLSLRSRKARCCW*PWALPV
Trigger: CACAGGGAGAGCCCATGGCCACCAGCAGCAGCGAGC...CTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp CATGCCCACTTTGAACATGGCTGCCTGCGGCTCACCAAGCTCATGGAACGGAGGGTGGGCTCGGAGCTCTaGGATGAGAATGGTGACCGC +
Preference number: 4 (lower is better)
Translates to: HAHFEHGCLRLTKLMERRVGSEL*DENGDR
Trigger: GCGGTCACCATTCTCATCCCAGAGCTCCGAGCCCAC...CCTCCGTTCCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAGTGGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 72 bp ATGGTGACCGCGGCCTGCACCGCTCGGCGGATGATGTaGTCCATCGCGAACATCCAGTGGGGCCTAATTAAG +
Preference number: 4 (lower is better)
Translates to: MVTAACTARRMM*SIANIQWGLIK
Trigger: CTTAATTAGGCCCCACTGGATGTTCGCGATGGACAACATCATCCGCCGAGCGGTGCAGGCCGCGGTCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGGGCTTCCTCCAGGCACCTaGTCCATAAATATCTTAATG +
Preference number: 4 (lower is better)
Translates to: GVGVWGDRAVLAAAGGHGLPPGT*SINILM
Trigger: CATTAAGATATTTATGGAGCAGGTGCCTGGAGGAAG...CCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp TGTACTGGGAGACCGCACTCCAGAGTCTGCAGAGGAGACCACCCCGTAGTCGAAGTGATCATGGCTCACTaGAGCCTCCACACCTCCTGG +
Preference number: 4 (lower is better)
Translates to: CTGRPHSRVCRGDHPVVEVIMAH*SLHTSW
Trigger: CCAGGAGGTGTGGAGGCTGCAGTGAGCCATGATCAC...TTCGACTACGGGGTGGTCTCCTCTGCAGACTCTGGAGTGCGGTCTCCCAGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp CATGCCCACTTTGAACATGGCTGCCTGCGGCTCACCAAGCTCATGGAACGGAGGGGCTCACCAAGCTCATaGAACGGAGGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HAHFEHGCLRLTKLMERRGSPSS*NGGLLV
Trigger: CACCAGCAAGCCTCCGTTCCATGAGCTTGGTGAGCC...CCTCCGTTCCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAGTGGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GATATTGTGGTCGCCATCACCCGGTGCTCTGGGGAGCGGATGAAGTCCCTCAGGTCCTCGTGCAGAGGCTaGGAATACCTGCTATCTCTC +
Preference number: 4 (lower is better)
Translates to: DIVVAITRCSGERMKSLRSSCRG*EYLLSL
Trigger: GAGAGATAGCAGGTATTCTCAGCCTCTGCACGAGGA...CCTGAGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp AAGCCTTGTCTTTGGTTTCTGAGGCCTCCTGAGCCCTTCTGTACTGGGAGACCGGCTCTGGGGAGCGGATaGAGTCCCTCAGGATCCCAA +
Preference number: 4 (lower is better)
Translates to: KPCLWFLRPPEPFCTGRPALGSG*SPSGSQ
Trigger: TTGGGATCCTGAGGGACTTCATCCGCTCCCCAGAGC...CGGTCTCCCAGTACAGAAGGGCTCAGGAGGCCTCAGAAACCAAAGACAAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp CAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGGCACCGCTCGGCGGATaGTGTTGTCCATCGCGAACA +
Preference number: 4 (lower is better)
Translates to: QRILYRMARRSLSLRSRKAPLGG*CCPSRT
Trigger: TGTTCGCGATGGACAACATCATCCGCCGAGCGGTGC...CTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp CATGCCCACTTTGAACATGGCTGCCTGCGGCTCACCAAGCTCATGGAACGGAGGCACTTTGAACATGGCTaGCTGCGGCTCACCAAGCTC +
Preference number: 4 (lower is better)
Translates to: HAHFEHGCLRLTKLMERRHFEHG*LRLTKL
Trigger: GAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAGTG...CCTCCGTTCCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAGTGGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp ACCGCGGCCTGCACCGCTCGGCGGATGATGTTGTCCATCGCGAACATCCAGTGGTTGCCCTTGTTCACCTaGCTTAAGAAACCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TAACTARRMMLSIANIQWLPLFT*LKKPSL
Trigger: GAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAA...CCACTGGATGTTCGCGATGGACAACATCATCCGCCGAGCGGTGCAGGCCGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp CAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGGGTCCTCTCAAAGAGTaGGTCAGGCTGGGCGTCGGA +
Preference number: 4 (lower is better)
Translates to: QRILYRMARRSLSLRSRKGPLKE*VRLGVG
Trigger: TCCGACGCCCAGCCTGACGCACTCTTTGAGAGGACC...CTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp ACCGCGGCCTGCACCGCTCGGCGGATGATGTTGTCCATCGCGAACATCCAGTGGTGTCCAACTGAGAGATaGAACTCTTCGGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: TAACTARRMMLSIANIQWCPTER*NSSELW
Trigger: CCAGAGTTCCGAAGAGTTGCATCTCTCAGTTGGACA...CCACTGGATGTTCGCGATGGACAACATCATCCGCCGAGCGGTGCAGGCCGCGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GTAGCTCAGCAGTGGTGGCACGTTTGTGGGGGTCAGGCTCGAAACAGGATAAAAGTCGCCATCACCCGGTaGTCTGGGGAGCGGATGAAG +
Preference number: 4 (lower is better)
Translates to: VAQQWWHVCGGQARNRIKVAITR*SGERMK
Trigger: CTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGAC...TTTTATCCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp TGTACTGGGAGACCGCACTCCAGAGTCTGCAGAGGAGACCACCCCGTAGTCGAACACACTCCTGCAGGTTaGAAGCCACCTGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CTGRPHSRVCRGDHPVVEHTPAG*KPPGSA
Trigger: AGCAGAACCAGGTGGCTTCCAACCTGCAGGAGTGTG...TTCGACTACGGGGTGGTCTCCTCTGCAGACTCTGGAGTGCGGTCTCCCAGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp CTGGGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGTTAATGATGATGTCTaGGGTCAGAACCTCAGTATT +
Preference number: 4 (lower is better)
Translates to: LGVGVWGDRAVLAAAGGHVNDDV*GQNLSI
Trigger: AATACTGAGGTTCTGACCTCAGACATCATCATTAAC...ATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GATATTGTGGTCGCCATCACCCGGTGCTCTGGGGAGCGGATGAAGTCCCTCAGGACAGAGCCCAGGTACTaGACGATATTGCGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: DIVVAITRCSGERMKSLRTEPRY*TILRCL
Trigger: TAAGCACCGCAATATCGTTCAGTACCTGGGCTCTGT...CCTGAGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GATATTGTGGTCGCCATCACCCGGTGCTCTGGGGAGCGGATGAAGTCCCTCAGGAATGTAGCCGTTCTCTaGAACAGAGCCCAGGTACTG +
Preference number: 4 (lower is better)
Translates to: DIVVAITRCSGERMKSLRNVAVL*NRAQVL
Trigger: CAGTACCTGGGCTCTGTTTCAGAGAACGGCTACATT...CCTGAGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp CAGGTACTGAACGATATTGCGGTGCTTAAGGTACTTGTGCAGGGCTATCTCCTCAGCCGTGCTCGCTGCTaGTGGTGGCCATGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QVLNDIAVLKVLVQGYLLSRARC*WWPWAL
Trigger: GAGAGCCCATGGCCACCAGCAGCAGCGAGCACGGCT...GAGGAGATAGCCCTGCACAAGTACCTTAAGCACCGCAATATCGTTCAGTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGCAACCTCTCTGCTGCCTaGACGGCTTTCCCGACATCA +
Preference number: 4 (lower is better)
Translates to: GFCTGWHGAHCPCVAGRGNLSAA*TAFPTS
Trigger: TGATGTCGGGAAAGCCGTCCAGGCAGCAGAGAGGTT...GCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 72 bp CCAGATATCGGCTGGGGCACCATATCCGCGAGGCCCTaGGTCAATTATCTCAGGTGCCATGTACTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PDIGWGTISARP*VNYLRCHVLQG
Trigger: ACCCTGCAGTACATGGCACCTGAGATAATTGACCAAGGGCCTCGCGGATATGGTGCCCCAGCCGATATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp CCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTGACCAAAATGTCGGGGCCCGGGTaGTCACAGCTCTGCAGAACC +
Preference number: 4 (lower is better)
Translates to: PSSSTVLPAVLVIISLTKMSGPG*SQLCRT
Trigger: GGTTCTGCAGAGCTGTGATCACCCGGGCCCCGACAT...TTTGGTCAAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp CATGCCCACTTTGAACATGGCTGCCTGCGGCTCACCAAGCTCATGGAACGGAGGATGGCTATTCGCACTTaGTTGCTCAGATCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: HAHFEHGCLRLTKLMERRMAIRT*LLRSRP
Trigger: TGGCCGAGATCTGAGCAATCAAGTGCGAATAGCCAT...CCTCCGTTCCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAGTGGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGATGTTGGTCTCCTGTCTaGGCTCACCCAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GSKQDKMKARASAERASGCWSPV*AHPAGG
Trigger: GCCTCCAGCTGGGTGAGCTCAGACAGGAGACCAACA...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GGTCTCTCCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTGGACCAGATATCGGCTaGGGCACCATATCCGCGAGG +
Preference number: 4 (lower is better)
Translates to: GLSLQLHRTACCIGYHLFGPDIG*GTISAR
Trigger: CCTCGCGGATATGGTGCCCCAGCCGATATCTGGTCC...AAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GTTTCGAGGTTCCAAAATCGGAGATTTTCACCACTCCGCTGTAGGTGTTCACCACGTGCTCGCTGCTGCTaGTGGCCATGGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: VSRFQNRRFSPLRCRCSPRARCC*WPWALP
Trigger: AGGGAGAGCCCATGGCCACCAGCAGCAGCGAGCACG...TGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTGGAACCTCGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp TTTGATGGCTATTCGCACTTGATTGCTCAGATCTCGGCCAGCATACACAATCCCCCTGGCCAGGTCCGGTaGCTGGGGGATAGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: FDGYSHLIAQISASIHNPPGQVR*LGDSPL
Trigger: AAGAGGGCTATCCCCCAGCCACCGGACCTGGCCAGG...GGGATTGTGTATGCTGGCCGAGATCTGAGCAATCAAGTGCGAATAGCCATCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp TTTTCACCACTCCGCTGTAGGTGTTCACCAGAACATTATCGCCCTTTATGTCTCAGGCTCAGGTGCTGCTaGTGGGGCTGGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FSPLRCRCSPEHYRPLCLRLRCC*WGWASW
Trigger: CCAGGAGGCCCAGCCCCACCAGCAGCACCTGAGCCT...GAGACATAAAGGGCGATAATGTTCTGGTGAACACCTACAGCGGAGTGGTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp ACCTGGTTCTGCTCCTCCCAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGGTCCACCTTGAGCTTTaGTATTGTGGTCGCCATCAC +
Preference number: 4 (lower is better)
Translates to: TWFCSSQRILYRMARRSLVHLEL*YCGRHH
Trigger: GTGATGGCGACCACAATATCAAAGCTCAAGGTGGAC...CAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTGGGAGGAGCAGAACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGCCCAGGTGAATCTGACTaGTGGACGAGCTGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GFCTGWHGAHCPCVAGRGPGESD*WTSCQS
Trigger: ACTTTGACAGCTCGTCCATCAGTCAGATTCACCTGG...GCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGCCTGCCACAGCTTAGCTaGTTGGTATCAAGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GFCTGWHGAHCPCVAGRGLPQLS*LVSSLV
Trigger: GACAAGGCTTGATACCAATCAGCTAAGCTGTGGCAG...GCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp CAGGTACTGAACGATATTGCGGTGCTTAAGGTACTTGTGCAGGGCTATCTCCTCCCGCACTCCAGAGTCTaGAGAGGAGACCACCCCGTA +
Preference number: 4 (lower is better)
Translates to: QVLNDIAVLKVLVQGYLLPHSRV*RGDHPV
Trigger: TACGGGGTGGTCTCCTCTGCAGACTCTGGAGTGCGG...GAGGAGATAGCCCTGCACAAGTACCTTAAGCACCGCAATATCGTTCAGTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GGTCTCTCCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTTGGCGCTGTCGCGGCTaGTGTCATCTTTGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: GLSLQLHRTACCIGYHLFWRCRG*CHLCSL
Trigger: CAGACTGCAAAGATGACACCAGCCGCGACAGCGCCA...AAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGAGTGGTGGCACGTTTGTaGGGGTCAGGCTCGAAACAG +
Preference number: 4 (lower is better)
Translates to: GSKQDKMKARASAERASGVVARL*GSGSKQ
Trigger: CTGTTTCGAGCCTGACCCCCACAAACGTGCCACCAC...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp AGGCAATTCGGTTCTTCTTGCCCTTGTTCACCTGCCTTAAGAAACCCTCTCTCATGCTGCTGGTGGCCATaGGCTCTCCCTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RQFGSSCPCSPALRNPLSCCWWP*ALPVWA
Trigger: TGCCCACACAGGGAGAGCCCATGGCCACCAGCAGCA...TGAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GGTCTCTCCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTCAGGTAGGCTCAAAGTaGGCTCGGAGCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: GLSLQLHRTACCIGYHLFQVGSK*ARSSGM
Trigger: CATCCCAGAGCTCCGAGCCCACTTTGAGCCTACCTG...AAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp TTTGATGGCTATTCGCACTTGATTGCTCAGATCTCGGCCAGCATACACAATCCCCTGAGCTCACCCAGCTaGAGGCTCAGGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FDGYSHLIAQISASIHNPLSSPS*RLRCCW
Trigger: CCAGCAGCACCTGAGCCTCCAGCTGGGTGAGCTCAG...GGGATTGTGTATGCTGGCCGAGATCTGAGCAATCAAGTGCGAATAGCCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GATATTGTGGTCGCCATCACCCGGTGCTCTGGGGAGCGGATGAAGTCCCTCAGGGTTTGGTGTAAAACTTaGTTGTCGGTTCCTTCATCG +
Preference number: 4 (lower is better)
Translates to: DIVVAITRCSGERMKSLRVWCKT*LSVPSS
Trigger: CGATGAAGGAACCGACAATCAAGTTTTACACCAAAC...CCTGAGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GGTTGGCTCTATGACCAGAACCTGGTTAGAGATTACGCGGTTGTCTGCTCCATTCCGGTCTTCCAAGGCTaGGCTCTCGTCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: GWLYDQNLVRDYAVVCSIPVFQG*ALVWNT
Trigger: AGTGTTCCAGACGAGAGCTCAGCCTTGGAAGACCGG...AATGGAGCAGACAACCGCGTAATCTCTAACCAGGTTCTGGTCATAGAGCCAACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp ACAGAAGCTTTAACAAAACATGTAGCGTGGTGGGACACTCTGCCACAGCTTAGCGGCGCTCACTGTCCTTaGGTAGCAGGAAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TEALTKHVAWWDTLPQLSGAHCP*VAGRGP
Trigger: AGGGCCTCTTCCTGCTACGCAAGGACAGTGAGCGCC...GCTAAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGTTAAAGCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGCTTTGCATCAGCTCCTTaGAGCCGCAACCAGTCTATA +
Preference number: 4 (lower is better)
Translates to: GFCTGWHGAHCPCVAGRGFASAP*SRNQSI
Trigger: TATAGACTGGTTGCGGCTGCAAGGAGCTGATGCAAA...GCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGTCTCTCCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTCCCACCTCAGCCTCCTaGATAGCTGGGACTACAAGT +
Preference number: 4 (lower is better)
Translates to: GLSLQLHRTACCIGYHLFPTSAS*IAGTTS
Trigger: ACTTGTAGTCCCAGCTATGCAGGAGGCTGAGGTGGG...AAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp TCTTCAACAATCTTTTCAATTGTCTTTGCATCAGCTCCTTGCAGCCGCAACCAGTGGGCTCTCCCTGTGTaGGCAGGGCCAGGACGACAC +
Preference number: 4 (lower is better)
Translates to: SSTIFSIVFASAPCSRNQWALPV*AGPGRH
Trigger: GTGTCGTCCTGGCCCTGCCCACACAGGGAGAGCCCA...CTGGTTGCGGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAGATTGTTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GGTCTCTCCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTCTTGTCTTTGGTTTCTaGGGCCTCCTGAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GLSLQLHRTACCIGYHLFLVFGF*GLLSPS
Trigger: AGAAGGGCTCAGGAGGCCTCAGAAACCAAAGACAAG...AAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGAACCTGGAGCATGATCTaGAGAGCCTTCTCACGGTCA +
Preference number: 4 (lower is better)
Translates to: GSKQDKMKARASAERASGTWSMI*RAFSRS
Trigger: TGACCGTGAGAAGGCTCTGCAGATCATGCTCCAGGT...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGAGAAGCCACCTGGTTCTaGTCCTCCCAGAGGATTTTG +
Preference number: 4 (lower is better)
Translates to: GSKQDKMKARASAERASGEATWF*SSQRIL
Trigger: CAAAATCCTCTGGGAGGAGCAGAACCAGGTGGCTTC...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GGTCTCTCCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTTATCCGCGAGGCCCTTaGTCAATTATCTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: GLSLQLHRTACCIGYHLFYPRGP*SIISGA
Trigger: GGCACCTGAGATAATTGACCAAGGGCCTCGCGGATA...AAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGCTCTGGAATCTCAGGGTaGATCTTAAACATGCCCACT +
Preference number: 4 (lower is better)
Translates to: GFCTGWHGAHCPCVAGRGSGISG*ILNMPT
Trigger: AGTGGGCATGTTTAAGATCCACCCTGAGATTCCAGA...GCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp ACAGAAGCTTTAACAAAACATGTAGCGTGGTGGGACACTCTGCCACAGCTTAGCGTAGCTCAGCAGTGGTaGCACGTTTGTGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TEALTKHVAWWDTLPQLSVAQQW*HVCGGQ
Trigger: CTGACCCCCACAAACGTGCCACCACTGCTGAGCTAC...GCTAAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGTTAAAGCTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGAGGATTTTGTACAGGATaGCACGGCGCTCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: GSKQDKMKARASAERASGGFCTG*HGAHCP
Trigger: AGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp TTTTCACCACTCCGCTGTAGGTGTTCACCAGAACATTATCGCCCTTTATGTCTCCATCACCCGGTGCTCTaGGGAGCGGATGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: FSPLRCRCSPEHYRPLCLHHPVL*GADEVP
Trigger: AGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATG...GAGACATAAAGGGCGATAATGTTCTGGTGAACACCTACAGCGGAGTGGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp CAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGATCAAGCCTTGTCTTTaGTTTCTGAGGCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QRILYRMARRSLSLRSRKIKPCL*FLRPPE
Trigger: CTCAGGAGGCCTCAGAAACCAAAGACAAGGCTTGAT...CTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GTAGCTCAGCAGTGGTGGCACGTTTGTGGGGGTCAGGCTCGAAACAGGATAAAAACAAAACATGTAGCGTaGTGGGACACTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: VAQQWWHVCGGQARNRIKTKHVA*WDTLPQ
Trigger: CTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGT...TTTTATCCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp AAGCCTTGTCTTTGGTTTCTGAGGCCTCCTGAGCCCTTCTGTACTGGGAGACCGCTGGTACACTTTGGTTaGCTCTATGACCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: KPCLWFLRPPEPFCTGRPLVHFG*LYDQNL
Trigger: CAGGTTCTGGTCATAGAGCCAACCAAAGTGTACCAG...CGGTCTCCCAGTACAGAAGGGCTCAGGAGGCCTCAGAAACCAAAGACAAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp AGGCAATTCGGTTCTTCTTGCCCTTGTTCACCTGCCTTAAGAAACCCTCTCTCATATCCATGCGGAGCTTaGTCCGAGCTAGCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: RQFGSSCPCSPALRNPLSYPCGA*SELAPS
Trigger: CGAAGGAGCTAGCTCGGATCAAGCTCCGCATGGATA...TGAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp ACAGAAGCTTTAACAAAACATGTAGCGTGGTGGGACACTCTGCCACAGCTTAGCGTACCATACCAGTTCTaGGGCAGTGTCCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: TEALTKHVAWWDTLPQLSVPYQF*GSVPAS
Trigger: GGAAGCTGGGACACTGCCTCAGAACTGGTATGGTAC...GCTAAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGTTAAAGCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp TTTTCACCACTCCGCTGTAGGTGTTCACCAGAACATTATCGCCCTTTATGTCTCGAACAACCTCTCTGCTaGCTGGACGGCTTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: FSPLRCRCSPEHYRPLCLEQPLC*LDGFPD
Trigger: GTCGGGAAAGCCGTCCAGGCAGCAGAGAGGTTGTTC...GAGACATAAAGGGCGATAATGTTCTGGTGAACACCTACAGCGGAGTGGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGTCTCTCCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTAAGTTCAGCCGCTCTTaGCTGGGCGAGTGTTCAATA +
Preference number: 4 (lower is better)
Translates to: GLSLQLHRTACCIGYHLFKFSRS*LGECSI
Trigger: TATTGAACACTCGCCCAGGCAAGAGCGGCTGAACTT...AAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGATCAGGTGCCATGTACTaGAGGGTGCCAGTAAAAGTC +
Preference number: 4 (lower is better)
Translates to: GSKQDKMKARASAERASGSGAMY*RVPVKV
Trigger: GACTTTTACTGGCACCCTGCAGTACATGGCACCTGA...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp ACCTGGTTCTGCTCCTCCCAGAGGATTTTGTACAGGATGGCACGGCGCTCACTGTTCTGTTCTAGAGTTTaGCGCAGAAGATTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: TWFCSSQRILYRMARRSLFCSRV*RRRFWY
Trigger: GTACCAGAATCTTCTGCGGCAAACTCTAGAACAGAA...CAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTGGGAGGAGCAGAACCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp AGGCAATTCGGTTCTTCTTGCCCTTGTTCACCTGCCTTAAGAAACCCTCTCTCACTGCCCGTAGGGGCCTaGTGGGTTCTCTGTAATACA +
Preference number: 4 (lower is better)
Translates to: RQFGSSCPCSPALRNPLSLPVGA*WVLCNT
Trigger: TGTATTACAGAGAACCCAGCAGGCCCCTACGGGCAG...TGAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp TTTTCACCACTCCGCTGTAGGTGTTCACCAGAACATTATCGCCCTTTATGTCTCTGCGATACCACTCAATaGCGCTGTCGCGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FSPLRCRCSPEHYRPLCLCDTTQ*RCRGWC
Trigger: ACACCAGCCGCGACAGCGCCATTGAGTGGTATCGCA...GAGACATAAAGGGCGATAATGTTCTGGTGAACACCTACAGCGGAGTGGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp CATGCCCACTTTGAACATGGCTGCCTGCGGCTCACCAAGCTCATGGAACGGAGGTGCACTGCTCTTCGGTaGAAAAGTAGATTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: HAHFEHGCLRLTKLMERRCTALR*KSRFES
Trigger: ACTTTCAAATCTACTTTTCCACCGAAGAGCAGTGCA...CCTCCGTTCCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAGTGGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp ACAGAAGCTTTAACAAAACATGTAGCGTGGTGGGACACTCTGCCACAGCTTAGCTCAGTAGCTCAGCAGTaGTGGCACGTTTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TEALTKHVAWWDTLPQLSSVAQQ*WHVCGG
Trigger: ACCCCCACAAACGTGCCACCACTGCTGAGCTACTGA...GCTAAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGTTAAAGCTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp AGGCAATTCGGTTCTTCTTGCCCTTGTTCACCTGCCTTAAGAAACCCTCTCTCAAACTCTTCGGAACTCTaGGCCACACACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RQFGSSCPCSPALRNPLSNSSEL*ATHSCR
Trigger: CCTGCAGGAGTGTGTGGCCCAGAGTTCCGAAGAGTT...TGAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 72 bp AAACCCTCTCTCAGTAGCTCAGCAGTGGTGGCACGTTaGTGGGGGTCAGGCTCGAAACAGGATAAAATGAAG +
Preference number: 4 (lower is better)
Translates to: KPSLSSSAVVAR*WGSGSKQDKMK
Trigger: CTTCATTTTATCCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTACTGAGAGAGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 72 bp GGACCTTCTGAGGGCTTGAAGGCAATTCGGTTCTTCTaGCCCTTGTTCACCTGCCTTAAGAAACCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: GPSEGLKAIRFF*PLFTCLKKPSL
Trigger: GAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCTTCAAGCCCTCAGAAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp CAGGTACTGAACGATATTGCGGTGCTTAAGGTACTTGTGCAGGGCTATCTCCTCCTGGAGGTTTCAGTTTaGACAACCTCTCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QVLNDIAVLKVLVQGYLLLEVSV*TTSLLP
Trigger: AGGCAGCAGAGAGGTTGTTCAAACTGAAACCTCCAG...GAGGAGATAGCCCTGCACAAGTACCTTAAGCACCGCAATATCGTTCAGTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GGTTGGCTCTATGACCAGAACCTGGTTAGAGATTACGCGGTTGTCTGCTCCATTCGAAACAGGATAAAATaGAGGCTCGGGCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GWLYDQNLVRDYAVVCSIRNRIK*RLGLQL
Trigger: CAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCG...AATGGAGCAGACAACCGCGTAATCTCTAACCAGGTTCTGGTCATAGAGCCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp CCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTGACCAAAGGAGTTCAAACCCTTTaGGATACCACTCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: PSSSTVLPAVLVIISLTKGVQTL*DTTQWR
Trigger: GCGCCATTGAGTGGTATCGCAAAGGGTTTGAACTCC...TTTGGTCAAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGTTGGCTCTATGACCAGAACCTGGTTAGAGATTACGCGGTTGTCTGCTCCATTTGCTTAAGGTACTTGTaGAGGGCTATCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: GWLYDQNLVRDYAVVCSICLRYL*RAISSC
Trigger: GCACGAGGAGATAGCCCTGCACAAGTACCTTAAGCA...AATGGAGCAGACAACCGCGTAATCTCTAACCAGGTTCTGGTCATAGAGCCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp TTTTCACCACTCCGCTGTAGGTGTTCACCAGAACATTATCGCCCTTTATGTCTCTTGAACATGGCTGCCTaGGGCTCACCAAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: FSPLRCRCSPEHYRPLCLLNMAA*GSPSSW
Trigger: CCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAA...GAGACATAAAGGGCGATAATGTTCTGGTGAACACCTACAGCGGAGTGGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp AATTTCCTAATATTCCGGGAGGTCAAAACCAAGGCTCACTGTTTTCACAATACACTGGGCGTCGGAGTCTaGGGAGACAGAGCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: NFLIFREVKTKAHCFHNTLGVGV*GDRAVL
Trigger: GAGCACGGCTCTGTCTCCCCAGACTCCGACGCCCAG...TGTATTGTGAAAACAGTGAGCCTTGGTTTTGACCTCCCGGAATATTAGGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp AATTTCCTAATATTCCGGGAGGTCAAAACCAAGGCTCACTGTTTTCACAATACAAGCAGGAAGAGGCCCTaGTCCCTGTCCTCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: NFLIFREVKTKAHCFHNTSRKRP*SLSSGD
Trigger: GTCCCCGGAGGACAGGGACCAGGGCCTCTTCCTGCT...TGTATTGTGAAAACAGTGAGCCTTGGTTTTGACCTCCCGGAATATTAGGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp CCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTGACCAAACCCGTAGGGGCCTGCTaGGTTCTCTGTAATACAATT +
Preference number: 4 (lower is better)
Translates to: PSSSTVLPAVLVIISLTKPVGAC*VLCNTI
Trigger: AATTGTATTACAGAGAACCCAGCAGGCCCCTACGGG...TTTGGTCAAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 72 bp TCTGAGGGCTTGAAGGCAATTCGGTTCTTCTTGCCCTaGTTCACCTGCCTTAAGAAACCCTCTCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SEGLKAIRFFLP*FTCLKKPSLSS
Trigger: GCTACTGAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCTTCAAGCCCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GTAGCTCAGCAGTGGTGGCACGTTTGTGGGGGTCAGGCTCGAAACAGGATAAAAGTCATCTTTGCAGTCTaGATCCAAGAAGATGTCCTT +
Preference number: 4 (lower is better)
Translates to: VAQQWWHVCGGQARNRIKVIFAV*IQEDVL
Trigger: AAGGACATCTTCTTGGATTCAGACTGCAAAGATGAC...TTTTATCCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GGTCTCTCCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTACGATCTGGTTTTCATaGAGATACTTAAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GLSLQLHRTACCIGYHLFTIWFS*RYLRPS
Trigger: GGAGGGCCTTAAGTATCTTCATGAAAACCAGATCGT...AAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp ACAGAAGCTTTAACAAAACATGTAGCGTGGTGGGACACTCTGCCACAGCTTAGCGACCTTCTGAGGGCTTaGAGGCAATTCGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TEALTKHVAWWDTLPQLSDLLRA*RQFGSS
Trigger: AGAAGAACCGAATTGCCTTCAAGCCCTCAGAAGGTC...GCTAAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGTTAAAGCTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp CCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTGACCAAATCTCACGGTCACCTGTaGTGTTTCTCCTATTCAGTG +
Preference number: 4 (lower is better)
Translates to: PSSSTVLPAVLVIISLTKSHGHL*CFSYSV
Trigger: CACTGAATAGGAGAAACAGCACAGGTGACCGTGAGA...TTTGGTCAAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGAGGCTGGTGTCATCTTTaGAGTCTGAATCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GSKQDKMKARASAERASGGWCHL*SLNPRR
Trigger: TCTTCTTGGATTCAGACTGCAAAGATGACACCAGCC...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGCAACTCTCTCACCATTTaGATCATGGTCATACTCATA +
Preference number: 4 (lower is better)
Translates to: GFCTGWHGAHCPCVAGRGNSLTI*IMVILI
Trigger: TATGAGTATGACCATGATGCAAATGGTGAGAGAGTT...GCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp CAGGTACTGAACGATATTGCGGTGCTTAAGGTACTTGTGCAGGGCTATCTCCTCCTATTCGCACTTGATTaGTCAGATCTCGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QVLNDIAVLKVLVQGYLLLFALD*SDLGQH
Trigger: ATGCTGGCCGAGATCTGAGCAATCAAGTGCGAATAG...GAGGAGATAGCCCTGCACAAGTACCTTAAGCACCGCAATATCGTTCAGTACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GTTTCGAGGTTCCAAAATCGGAGATTTTCACCACTCCGCTGTAGGTGTTCACCAGTCAATTATCTCAGGTaGCATGTACTGCAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VSRFQNRRFSPLRCRCSPVNYLR*HVLQGA
Trigger: GGCACCCTGCAGTACATGGCACCTGAGATAATTGAC...TGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTGGAACCTCGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGACAATTCGGTTCTTCTTaGCCTTGTTCACCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: GSKQDKMKARASAERASGQFGSS*PCSPAL
Trigger: TAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTG...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp TCTTCAACAATCTTTTCAATTGTCTTTGCATCAGCTCCTTGCAGCCGCAACCAGCAGCTCTGCAGAACCTaGAGCATGATCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSTIFSIVFASAPCSRNQQLCRT*SMICRA
Trigger: GGCTCTGCAGATCATGCTCCAGGTTCTGCAGAGCTG...CTGGTTGCGGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAGATTGTTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GGTTGGCTCTATGACCAGAACCTGGTTAGAGATTACGCGGTTGTCTGCTCCATTATCGCGAACATCCAGTaGGGCCTAATTAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GWLYDQNLVRDYAVVCSIIANIQ*GLIKWF
Trigger: GAACCACTTAATTAGGCCCCACTGGATGTTCGCGAT...AATGGAGCAGACAACCGCGTAATCTCTAACCAGGTTCTGGTCATAGAGCCAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 72 bp ATCTCTCTCCGGGATTTCTTTGATGGCTATTCGCACTaGATTGCTCAGATCTCGGCCAGCATACACAATCCC +
Preference number: 4 (lower is better)
Translates to: ISLRDFFDGYSH*IAQISASIHNP
Trigger: GGGATTGTGTATGCTGGCCGAGATCTGAGCAATCAAGTGCGAATAGCCATCAAAGAAATCCCGGAGAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 72 bp GAGCGGATGAAGTCCCTCAGGATCCCAATGATTTGCTaGATGTGTCCAACTGAGAGATGCAACTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: ERMKSLRIPMIC*MCPTERCNSSE
Trigger: TTCCGAAGAGTTGCATCTCTCAGTTGGACACATCAAGCAAATCATTGGGATCCTGAGGGACTTCATCCGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GTTTCGAGGTTCCAAAATCGGAGATTTTCACCACTCCGCTGTAGGTGTTCACCATCCCGAATAGAGGGATaGCTGGAGTTCAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: VSRFQNRRFSPLRCRCSPSRIEG*LEFKPF
Trigger: AAAGGGTTTGAACTCCAGTCATCCCTCTATTCGGGA...TGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTGGAACCTCGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp GTTTCGAGGTTCCAAAATCGGAGATTTTCACCACTCCGCTGTAGGTGTTCACCATTATTTACGGCATCCTaGAATCCGAACAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: VSRFQNRRFSPLRCRCSPLFTAS*NPNSTR
Trigger: CCTGGTGCTGTTCGGATTTCAGGATGCCGTAAATAA...TGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTGGAACCTCGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp GTAGCTCAGCAGTGGTGGCACGTTTGTGGGGGTCAGGCTCGAAACAGGATAAAATCACCATTTGCATCATaGTCATACTCATACTCCAAG +
Preference number: 4 (lower is better)
Translates to: VAQQWWHVCGGQARNRIKSPFAS*SYSYSK
Trigger: CTTGGAGTATGAGTATGACCATGATGCAAATGGTGA...TTTTATCCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp ACAGAAGCTTTAACAAAACATGTAGCGTGGTGGGACACTCTGCCACAGCTTAGCTCTCCGGGATTTCTTTaGTGGCTATTCGCACTTGAT +
Preference number: 4 (lower is better)
Translates to: TEALTKHVAWWDTLPQLSSPGFL*WLFALD
Trigger: ATCAAGTGCGAATAGCCATCAAAGAAATCCCGGAGA...GCTAAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGTTAAAGCTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp ACAGAAGCTTTAACAAAACATGTAGCGTGGTGGGACACTCTGCCACAGCTTAGCCTTTTCAATTGTCTTTaGATCAGCTCCTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TEALTKHVAWWDTLPQLSLFNCL*ISSLQP
Trigger: CGGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAG...GCTAAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGTTAAAGCTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp AGGCAATTCGGTTCTTCTTGCCCTTGTTCACCTGCCTTAAGAAACCCTCTCTCATCGCAGGTACCAGACTaGAGGTTTCAGTTTGAACAA +
Preference number: 4 (lower is better)
Translates to: RQFGSSCPCSPALRNPLSSQVPD*RFQFEQ
Trigger: TTGTTCAAACTGAAACCTCCAGTCTGGTACCTGCGA...TGAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp CAGGTACTGAACGATATTGCGGTGCTTAAGGTACTTGTGCAGGGCTATCTCCTCTGCCGCAGAAGATTCTaGTACTCTCTCTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: QVLNDIAVLKVLVQGYLLCRRRF*YSLSFS
Trigger: TGAAAAAGAGAGAGAGTACCAGAATCTTCTGCGGCA...GAGGAGATAGCCCTGCACAAGTACCTTAAGCACCGCAATATCGTTCAGTACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp ACAGAAGCTTTAACAAAACATGTAGCGTGGTGGGACACTCTGCCACAGCTTAGCTCTATGACCAGAACCTaGTTAGAGATTACGCGGTTG +
Preference number: 4 (lower is better)
Translates to: TEALTKHVAWWDTLPQLSSMTRT*LEITRL
Trigger: CAACCGCGTAATCTCTAACCAGGTTCTGGTCATAGA...GCTAAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGTTAAAGCTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 72 bp GGCAGTGTCCCAGCTTCCATGTTTGTTAAATACCCCTaGTTTGTTTCACCATTCCAGCAAGTGCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GSVPASMFVKYP*FVSPFQQVLKG
Trigger: ACCCTTCAGCACTTGCTGGAATGGTGAAACAAACAAGGGGTATTTAACAAACATGGAAGCTGGGACACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp ACAGAAGCTTTAACAAAACATGTAGCGTGGTGGGACACTCTGCCACAGCTTAGCTCTGTGGGTGAGACATaGCATAAAGAAACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: TEALTKHVAWWDTLPQLSSVGET*HKETVL
Trigger: GAGAACAGTTTCTTTATGGCATGTCTCACCCACAGA...GCTAAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGTTAAAGCTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GGTTGGCTCTATGACCAGAACCTGGTTAGAGATTACGCGGTTGTCTGCTCCATTAAGAGAAAAATCTACTaGACTGCTCTTCGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GWLYDQNLVRDYAVVCSIKRKIY*TALRWK
Trigger: TTTCCACCGAAGAGCAGTGCAGTAGATTTTTCTCTT...AATGGAGCAGACAACCGCGTAATCTCTAACCAGGTTCTGGTCATAGAGCCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp TCTTCAACAATCTTTTCAATTGTCTTTGCATCAGCTCCTTGCAGCCGCAACCAGACACAATCCCATACGTaGCTTTCCCCAAGACAACTC +
Preference number: 4 (lower is better)
Translates to: SSTIFSIVFASAPCSRNQTQSHT*LSPRQL
Trigger: GAGTTGTCTTGGGGAAAGGCACGTATGGGATTGTGT...CTGGTTGCGGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAGATTGTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp AGGCAATTCGGTTCTTCTTGCCCTTGTTCACCTGCCTTAAGAAACCCTCTCTCAAGGATCCCAATGATTTaGTTGATGTGTCCAACTGAG +
Preference number: 4 (lower is better)
Translates to: RQFGSSCPCSPALRNPLSRIPMI*LMCPTE
Trigger: CTCAGTTGGACACATCAAGCAAATCATTGGGATCCT...TGAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
3UTR CAA 72 bp CATACCAGTTCTGAGGCAGTGTCCCAGCTTCCATGTTaGTTAAATACCCCTTGTTTGTTTCACCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: HTSSEAVSQLPC*LNTPCLFHHSS
Trigger: GCTGGAATGGTGAAACAAACAAGGGGTATTTAACAAACATGGAAGCTGGGACACTGCCTCAGAACTGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp TCATCAAACTTTGATAGGCTTATTCCCTTTATGGAAGAGGCTGTAAAATTCCATGTTTCTGAGGCCTCCTaGGCCCTTCTGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSNFDRLIPFMEEAVKFHVSEAS*ALLYWE
Trigger: CTCCCAGTACAGAAGGGCTCAGGAGGCCTCAGAAAC...ATGGAATTTTACAGCCTCTTCCATAAAGGGAATAAGCCTATCAAAGTTTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CCA 90 bp TCATCAAACTTTGATAGGCTTATTCCCTTTATGGAAGAGGCTGTAAAATTCCATGCTTTCCCGACATCATaGGCCAGCATGCTGACGCTG +
Preference number: 4 (lower is better)
Translates to: SSNFDRLIPFMEEAVKFHAFPTS*ASMLTL
Trigger: CAGCGTCAGCATGCTGGCCCATGATGTCGGGAAAGC...ATGGAATTTTACAGCCTCTTCCATAAAGGGAATAAGCCTATCAAAGTTTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp AATTTCCTAATATTCCGGGAGGTCAAAACCAAGGCTCACTGTTTTCACAATACAAGTCCAGGTCCACCTTaGGCTTTGATATTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: NFLIFREVKTKAHCFHNTSPGPP*ALILWS
Trigger: CGACCACAATATCAAAGCTCAAGGTGGACCTGGACT...TGTATTGTGAAAACAGTGAGCCTTGGTTTTGACCTCCCGGAATATTAGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp GTTTCGAGGTTCCAAAATCGGAGATTTTCACCACTCCGCTGTAGGTGTTCACCAGTTTCTCCTATTCAGTaGAAACGCATAGTGGAATTT +
Preference number: 4 (lower is better)
Translates to: VSRFQNRRFSPLRCRCSPVSPIQ*KRIVEF
Trigger: AAATTCCACTATGCGTTTGCACTGAATAGGAGAAAC...TGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTGGAACCTCGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp AATTTCCTAATATTCCGGGAGGTCAAAACCAAGGCTCACTGTTTTCACAATACACTTGATGTGTCCAACTaGGAGATGCAACTCTTCGGA +
Preference number: 4 (lower is better)
Translates to: NFLIFREVKTKAHCFHNTLDVSN*EMQLFG
Trigger: TCCGAAGAGTTGCATCTCTCAGTTGGACACATCAAG...TGTATTGTGAAAACAGTGAGCCTTGGTTTTGACCTCCCGGAATATTAGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR GCA 90 bp AGGCAATTCGGTTCTTCTTGCCCTTGTTCACCTGCCTTAAGAAACCCTCTCTCAGTAAAATTCCATTCGTaGATCTGTTTCATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RQFGSSCPCSPALRNPLSVKFHS*ICFISV
Trigger: CACAGAAATGAAACAGATGCACGAATGGAATTTTAC...TGAGAGAGGGTTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp AATTTCCTAATATTCCGGGAGGTCAAAACCAAGGCTCACTGTTTTCACAATACAATTAGTAACAAGTTCTaGACTAATGATCGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: NFLIFREVKTKAHCFHNTISNKF*TNDRRY
Trigger: GTACCTGCGATCATTAGTTCAGAACTTGTTACTAAT...TGTATTGTGAAAACAGTGAGCCTTGGTTTTGACCTCCCGGAATATTAGGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR TCA 90 bp TCATCAAACTTTGATAGGCTTATTCCCTTTATGGAAGAGGCTGTAAAATTCCATAATTTAATGTTATGCTaGTCGGCCAAATCACACGTA +
Preference number: 4 (lower is better)
Translates to: SSNFDRLIPFMEEAVKFHNLMLC*SAKSHV
Trigger: TACGTGTGATTTGGCCGATCAGCATAACATTAAATT...ATGGAATTTTACAGCCTCTTCCATAAAGGGAATAAGCCTATCAAAGTTTGATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS GCA 90 bp GCCGCCGGCCGCGCCGCCCTGGGAGCTCTCACTGCGCACGTATACTaGCCGCAGAGCCCGCCGCGGCCCGCCCCCACTCTCGCCCTCGCC +
Preference number: 5 (lower is better)
Translates to: AAGRAALGALTAHVY*PQSPPRPAPTLALA
Trigger: GGCGAGGGCGAGAGTGGGGGCGGGCCGCGGCGGGCTCTGCGGGCAGTATACGTGCGCAGTGAGAGCTCCCAGGGCGGCGCGGCCGGCGGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS GCA 90 bp GGCCCCGGCCGGAGCATTCCCACCGCCGCTCTCCATGTGCCCGCCTaGGCGCCCTTCCCCTGGGCGAGTGGCCAGCGGCTGCGATCCGCT +
Preference number: 5 (lower is better)
Translates to: GPGRSIPTAALHVPA*APFPWASGQRLRSA
Trigger: AGCGGATCGCAGCCGCTGGCCACTCGCCCAGGGGAAGGGCGCGCAGGCGGGCACATGGAGAGCGGCGGTGGGAATGCTCCGGCCGGGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS TCA 90 bp GCCGTCTCCCCGAAGTCCAGCTCCCCGAAGGGCACGGAGGTGAGGTaGGCGCCCTCGGCCTCGCAGGCCCGCAGCAGGCACTGCCGCGCC +
Preference number: 5 (lower is better)
Translates to: AVSPKSSSPKGTEVR*APSASQARSRHCRA
Trigger: GGCGCGGCAGTGCCTGCTGCGGGCCTGCGAGGCCGAGGGCGCTCACCTCACCTCCGTGCCCTTCGGGGAGCTGGACTTCGGGGAGACGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS TCA 90 bp GCACGGCCGTCTCCCCGAAGTCCAGCTCCCCGAAGGGCACGGAGGTaGGGTGAGCGCCCTCGGCCTCGCAGGCCCGCAGCAGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: ARPSPRSPAPRRARR*GERPRPRRPAAGTA
Trigger: GGCAGTGCCTGCTGCGGGCCTGCGAGGCCGAGGGCGCTCACCTCACCTCCGTGCCCTTCGGGGAGCTGGACTTCGGGGAGACGGCCGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS GCA 90 bp ATGTGCCCGCCTGCGCGCCCTTCCCCTGGGCGAGTGGCCAGCGGCTaGGATCCGCTAGGAGGCACAAGTTACAGCAGCCGCGCAGGCGGT +
Preference number: 5 (lower is better)
Translates to: MCPPARPSPGRVASG*DPLGGTSYSSRAGG
Trigger: ACCGCCTGCGCGGCTGCTGTAACTTGTGCCTCCTAGCGGATCGCAGCCGCTGGCCACTCGCCCAGGGGAAGGGCGCGCAGGCGGGCACAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS CCA 90 bp ATTCCCACCGCCGCTCTCCATGTGCCCGCCTGCGCGCCCTTCCCCTaGGCGAGTGGCCAGCGGCTGCGATCCGCTAGGAGGCACAAGTTA +
Preference number: 5 (lower is better)
Translates to: IPTAALHVPACAPFP*ASGQRLRSARRHKL
Trigger: TAACTTGTGCCTCCTAGCGGATCGCAGCCGCTGGCCACTCGCCCAGGGGAAGGGCGCGCAGGCGGGCACATGGAGAGCGGCGGTGGGAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS-3UTR CAA 90 bp CTGGGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGATGGCTATTCGCACTaGATTGCTCAGATCTCGGCC +
Preference number: 5 (lower is better)
Translates to: LGVGVWGDRAVLAAAGGHDGYSH*IAQISA
Trigger: GGCCGAGATCTGAGCAATCAAGTGCGAATAGCCATC...ATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS CCA 90 bp TGTCCACCAAAGGCATGCACAGCGGGCCCAGGATGTTGTCCCAGTTaGGCTGCATGTACTCGGAGGCTCGTCTCTGGGCATCACTCTCGC +
Preference number: 5 (lower is better)
Translates to: CPPKACTAGPGCCPS*AACTRRLVSGHHSR
Trigger: GCGAGAGTGATGCCCAGAGACGAGCCTCCGAGTACATGCAGCCCAACTGGGACAACATCCTGGGCCCGCTGTGCATGCCTTTGGTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338883.9
ENST00000518578.5
CDS GCA 90 bp ACCAAAGGCATGCACAGCGGGCCCAGGATGTTGTCCCAGTTGGGCTaGATGTACTCGGAGGCTCGTCTCTGGGCATCACTCTCGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TKGMHSGPRMLSQLG*MYSEARLWASLSQQ
Trigger: TTGCTGCGAGAGTGATGCCCAGAGACGAGCCTCCGAGTACATGCAGCCCAACTGGGACAACATCCTGGGCCCGCTGTGCATGCCTTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338883.9
ENST00000518578.5
CDS-3UTR CAA 90 bp ACCGCGGCCTGCACCGCTCGGCGGATGATGTTGTCCATCGCGAACATCCAGTGGCTTTGCATCAGCTCCTaGCAGCCGCAACCAGTCTAT +
Preference number: 5 (lower is better)
Translates to: TAACTARRMMLSIANIQWLCISS*QPQPVY
Trigger: ATAGACTGGTTGCGGCTGCAAGGAGCTGATGCAAAG...CCACTGGATGTTCGCGATGGACAACATCATCCGCCGAGCGGTGCAGGCCGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp GGCGTCGGAGTCTGGGGAGACAGAGCCGTGCTCGCTGCTGCTGGTGGCCATGGGTTAAATACCCCTTGTTaGTTTCACCATTCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: GVGVWGDRAVLAAAGGHGLNTPC*FHHSSK
Trigger: CTTGCTGGAATGGTGAAACAAACAAGGGGTATTTAA...CCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS GCA 90 bp TCGCAGGTACCAGACTGGAGGTTTCAGTTTGAACAACCTCTCTGCTaGCTGGACGGCTTTCCCGACATCATGGGCCAGCATGCTGACGCT +
Preference number: 5 (lower is better)
Translates to: SQVPDWRFQFEQPLC*LDGFPDIMGQHADA
Trigger: AGCGTCAGCATGCTGGCCCATGATGTCGGGAAAGCCGTCCAGGCAGCAGAGAGGTTGTTCAAACTGAAACCTCCAGTCTGGTACCTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS-3UTR CAA 90 bp CATGCCCACTTTGAACATGGCTGCCTGCGGCTCACCAAGCTCATGGAACGGAGGTTATCCATGCGGAGCTaGATCCGAGCTAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HAHFEHGCLRLTKLMERRLSMRS*IRASSF
Trigger: GAAGGAGCTAGCTCGGATCAAGCTCCGCATGGATAA...CCTCCGTTCCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAGTGGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp CATGCCCACTTTGAACATGGCTGCCTGCGGCTCACCAAGCTCATGGAACGGAGGATATCCGCGAGGCCCTaGGTCAATTATCTCAGGTGC +
Preference number: 5 (lower is better)
Translates to: HAHFEHGCLRLTKLMERRISARP*VNYLRC
Trigger: GCACCTGAGATAATTGACCAAGGGCCTCGCGGATAT...CCTCCGTTCCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAGTGGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS CCA 90 bp AGGTACCAGACTGGAGGTTTCAGTTTGAACAACCTCTCTGCTGCCTaGACGGCTTTCCCGACATCATGGGCCAGCATGCTGACGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RYQTGGFSLNNLSAA*TAFPTSWASMLTLK
Trigger: CTTCAGCGTCAGCATGCTGGCCCATGATGTCGGGAAAGCCGTCCAGGCAGCAGAGAGGTTGTTCAAACTGAAACCTCCAGTCTGGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS-3UTR CAA 90 bp CCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTGACCAAAGCAGTGGTGGCACGTTaGTGGGGGTCAGGCTCGAAA +
Preference number: 5 (lower is better)
Translates to: PSSSTVLPAVLVIISLTKAVVAR*WGSGSK
Trigger: TTTCGAGCCTGACCCCCACAAACGTGCCACCACTGC...TTTGGTCAAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGAGCTCGGCGGATGATGTaGTCCATCGCGAACATCCAG +
Preference number: 5 (lower is better)
Translates to: GSKQDKMKARASAERASGARRMM*SIANIQ
Trigger: CTGGATGTTCGCGATGGACAACATCATCCGCCGAGC...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp AAGCCTTGTCTTTGGTTTCTGAGGCCTCCTGAGCCCTTCTGTACTGGGAGACCGGAAGGCTGGTACACTTaGGTTGGCTCTATGACCAGA +
Preference number: 5 (lower is better)
Translates to: KPCLWFLRPPEPFCTGRPEGWYT*VGSMTR
Trigger: TCTGGTCATAGAGCCAACCAAAGTGTACCAGCCTTC...CGGTCTCCCAGTACAGAAGGGCTCAGGAGGCCTCAGAAACCAAAGACAAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp GTAGCTCAGCAGTGGTGGCACGTTTGTGGGGGTCAGGCTCGAAACAGGATAAAATTCATCGGCCCCCATTaGGATCGCAGAAGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: VAQQWWHVCGGQARNRIKFIGPH*DRRRAE
Trigger: TTCTGCTCTTCTGCGATCCAAATGGGGGCCGATGAA...TTTTATCCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGATCATGGAACGGAGGCTaGCTGGTGGCCATCTCAATG +
Preference number: 5 (lower is better)
Translates to: GSKQDKMKARASAERASGSWNGG*LVAISM
Trigger: CATTGAGATGGCCACCAGCAAGCCTCCGTTCCATGA...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp GGTCTCTCCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTGGACCTTCTGAGGGCTaGAAGGCAATTCGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: GLSLQLHRTACCIGYHLFGPSEG*KAIRFF
Trigger: GAAGAACCGAATTGCCTTCAAGCCCTCAGAAGGTCC...AAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp TGTACTGGGAGACCGCACTCCAGAGTCTGCAGAGGAGACCACCCCGTAGTCGAATCCCAGCTTCCATGTTaGTTAAATACCCCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: CTGRPHSRVCRGDHPVVESQLPC*LNTPCL
Trigger: CAAACAAGGGGTATTTAACAAACATGGAAGCTGGGA...TTCGACTACGGGGTGGTCTCCTCTGCAGACTCTGGAGTGCGGTCTCCCAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS CCA 90 bp CAAAGCTTTCTCGGACTCCAAGATGGTAGAAGAGGGAAGGCTGTCTaGAGACATCGCTCATGTCTACCACAGCAACATCTGCGTCGTAGA +
Preference number: 5 (lower is better)
Translates to: QSFLGLQDGRRGKAV*RHRSCLPQQHLRRR
Trigger: TCTACGACGCAGATGTTGCTGTGGTAGACATGAGCGATGTCTCCAGACAGCCTTCCCTCTTCTACCATCTTGGAGTCCGAGAAAGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS-3UTR CAA 90 bp GGTCTCTCCCTCCAGCTCCACCGTACTGCCTGCTGTATTGGTTATCATCTCTTTCGGCTGGTGTCATCTTaGCAGTCTGAATCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: GLSLQLHRTACCIGYHLFRLVSS*QSESKK
Trigger: CTTCTTGGATTCAGACTGCAAAGATGACACCAGCCG...AAAGAGATGATAACCAATACAGCAGGCAGTACGGTGGAGCTGGAGGGAGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp GGCTCGAAACAGGATAAAATGAAGGCTCGGGCTTCAGCTGAAAGGGCTTCTGGATGGAGTTCAAACCCTTaGCGATACCACTCAATGGCG +
Preference number: 5 (lower is better)
Translates to: GSKQDKMKARASAERASGWSSNP*RYHSMA
Trigger: CGCCATTGAGTGGTATCGCAAAGGGTTTGAACTCCA...TCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATCCTGTTTCGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp GGATTTTGTACAGGATGGCACGGCGCTCACTGTCCTTGCGTAGCAGGAAGAGGCCAACTCTCTCACCATTaGCATCATGGTCATACTCAT +
Preference number: 5 (lower is better)
Translates to: GFCTGWHGAHCPCVAGRGQLSHH*HHGHTH
Trigger: ATGAGTATGACCATGATGCAAATGGTGAGAGAGTTG...GCCTCTTCCTGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp TTTGATGGCTATTCGCACTTGATTGCTCAGATCTCGGCCAGCATACACAATCCCCGGTGCTTAAGGTACTaGTGCAGGGCTATCTCCTCG +
Preference number: 5 (lower is better)
Translates to: FDGYSHLIAQISASIHNPRCLRY*CRAISS
Trigger: CGAGGAGATAGCCCTGCACAAGTACCTTAAGCACCG...GGGATTGTGTATGCTGGCCGAGATCTGAGCAATCAAGTGCGAATAGCCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp CAGGTACTGAACGATATTGCGGTGCTTAAGGTACTTGTGCAGGGCTATCTCCTCTTAAACATGCCCACTTaGAACATGGCTGCCTGCGGC +
Preference number: 5 (lower is better)
Translates to: QVLNDIAVLKVLVQGYLLLNMPT*NMAACG
Trigger: GCCGCAGGCAGCCATGTTCAAAGTGGGCATGTTTAA...GAGGAGATAGCCCTGCACAAGTACCTTAAGCACCGCAATATCGTTCAGTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS CCA 90 bp GGAGTTCAAACCCTTTGCGATACCACTCAATGGCGCTGTCGCGGCTaGTGTCATCTTTGCAGTCTGAATCCAAGAAGATGTCCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: GVQTLCDTTQWRCRG*CHLCSLNPRRCPCR
Trigger: TCTACAAGGACATCTTCTTGGATTCAGACTGCAAAGATGACACCAGCCGCGACAGCGCCATTGAGTGGTATCGCAAAGGGTTTGAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS-3UTR CAA 90 bp TTTTCACCACTCCGCTGTAGGTGTTCACCAGAACATTATCGCCCTTTATGTCTCGAAGTTCAGCCGCTCTaGCCTGGGCGAGTGTTCAAT +
Preference number: 5 (lower is better)
Translates to: FSPLRCRCSPEHYRPLCLEVQPL*PGRVFN
Trigger: ATTGAACACTCGCCCAGGCAAGAGCGGCTGAACTTC...GAGACATAAAGGGCGATAATGTTCTGGTGAACACCTACAGCGGAGTGGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp GTAGCTCAGCAGTGGTGGCACGTTTGTGGGGGTCAGGCTCGAAACAGGATAAAATCTTTTCAATTGTCTTaGCATCAGCTCCTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: VAQQWWHVCGGQARNRIKSFQLS*HQLLAA
Trigger: GGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAGA...TTTTATCCTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS CCA 90 bp AGAGAGCAGTGTCGGCATCGGTGTCATGGTACAAGATCACATTATTaGCCATGTCAAAGCTTTCTCGGACTCCAAGATGGTAGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: REQCRHRCHGTRSHY*PCQSFLGLQDGRRG
Trigger: CCCTCTTCTACCATCTTGGAGTCCGAGAAAGCTTTGACATGGCCAATAATGTGATCTTGTACCATGACACCGATGCCGACACTGCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS-3UTR CAA 90 bp GTTTCGAGGTTCCAAAATCGGAGATTTTCACCACTCCGCTGTAGGTGTTCACCAACTGGAGGTTTCAGTTaGAACAACCTCTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: VSRFQNRRFSPLRCRCSPTGGFS*NNLSAA
Trigger: GGCAGCAGAGAGGTTGTTCAAACTGAAACCTCCAGT...TGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTGGAACCTCGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp ACAGAAGCTTTAACAAAACATGTAGCGTGGTGGGACACTCTGCCACAGCTTAGCGCAATTCGGTTCTTCTaGCCCTTGTTCACCTGCCTT +
Preference number: 5 (lower is better)
Translates to: TEALTKHVAWWDTLPQLSAIRFF*PLFTCL
Trigger: AAGGCAGGTGAACAAGGGCAAGAAGAACCGAATTGC...GCTAAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGTTAAAGCTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp GGTTGGCTCTATGACCAGAACCTGGTTAGAGATTACGCGGTTGTCTGCTCCATTGATTGGTATCAAGCCTaGTCTTTGGTTTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GWLYDQNLVRDYAVVCSIDWYQA*SLVSEA
Trigger: GGCCTCAGAAACCAAAGACAAGGCTTGATACCAATC...AATGGAGCAGACAACCGCGTAATCTCTAACCAGGTTCTGGTCATAGAGCCAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp GTTTCGAGGTTCCAAAATCGGAGATTTTCACCACTCCGCTGTAGGTGTTCACCACGGTTCTTCTTGCCCTaGTTCACCTGCCTTAAGAAA +
Preference number: 5 (lower is better)
Translates to: VSRFQNRRFSPLRCRCSPRFFLP*FTCLKK
Trigger: TTTCTTAAGGCAGGTGAACAAGGGCAAGAAGAACCG...TGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTGGAACCTCGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS CCA 90 bp GTTACCATGTCCTTCAAAGAGAGAGCAGTGTCGGCATCGGTGTCATaGTACAAGATCACATTATTGGCCATGTCAAAGCTTTCTCGGACT +
Preference number: 5 (lower is better)
Translates to: VTMSFKERAVSASVS*YKITLLAMSKLSRT
Trigger: AGTCCGAGAAAGCTTTGACATGGCCAATAATGTGATCTTGTACCATGACACCGATGCCGACACTGCTCTCTCTTTGAAGGACATGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS-3UTR CAA 90 bp TCTTCAACAATCTTTTCAATTGTCTTTGCATCAGCTCCTTGCAGCCGCAACCAGCGCCAGTTCCTCACCTaGGTATTTCTCTCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: SSTIFSIVFASAPCSRNQRQFLT*VFLSGF
Trigger: AAAGCCAGAGAGAAATACCAAGGTGAGGAACTGGCG...CTGGTTGCGGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAGATTGTTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp GTTTCGAGGTTCCAAAATCGGAGATTTTCACCACTCCGCTGTAGGTGTTCACCAGTACTGCCTGCTGTATaGGTTATCATCTCTTTGACC +
Preference number: 5 (lower is better)
Translates to: VSRFQNRRFSPLRCRCSPVLPAV*VIISLT
Trigger: GGTCAAAGAGATGATAACCAATACAGCAGGCAGTAC...TGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTGGAACCTCGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS TCA 90 bp AGCAACAATCAGCAAAACTGCAAGATTAATTCCCGAATAGAGGGATaGCTGGAGTTCAAACCCTTTGCGATACCACTCAATGGCGCTGTC +
Preference number: 5 (lower is better)
Translates to: SNNQQNCKINSRIEG*LEFKPFAIPLNGAV
Trigger: GACAGCGCCATTGAGTGGTATCGCAAAGGGTTTGAACTCCAGTCATCCCTCTATTCGGGAATTAATCTTGCAGTTTTGCTGATTGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS-3UTR CAA 90 bp GTTTCGAGGTTCCAAAATCGGAGATTTTCACCACTCCGCTGTAGGTGTTCACCAATCCCAATGATTTGCTaGATGTGTCCAACTGAGAGA +
Preference number: 5 (lower is better)
Translates to: VSRFQNRRFSPLRCRCSPIPMIC*MCPTER
Trigger: TCTCTCAGTTGGACACATCAAGCAAATCATTGGGAT...TGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTGGAACCTCGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS CCA 90 bp TCCGAGCTAGCTCCTTCGCCAGTTCCTCACCTTGGTATTTCTCTCTaGCTTTCCGGATGTCATTTAACAAGGTTTCTTTGTAATAAACAC +
Preference number: 5 (lower is better)
Translates to: SELAPSPVPHLGISL*LSGCHLTRFLCNKH
Trigger: GTGTTTATTACAAAGAAACCTTGTTAAATGACATCCGGAAAGCCAGAGAGAAATACCAAGGTGAGGAACTGGCGAAGGAGCTAGCTCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338883.9
ENST00000518578.5
CDS-3UTR CAA 90 bp ACAGAAGCTTTAACAAAACATGTAGCGTGGTGGGACACTCTGCCACAGCTTAGCGGAAGTTTCAAATTGTaGTCCAGCAACAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: TEALTKHVAWWDTLPQLSGSFKL*SSNNQQ
Trigger: TTGCTGATTGTTGCTGGACAACAATTTGAAACTTCC...GCTAAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGTTAAAGCTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp ACAGAAGCTTTAACAAAACATGTAGCGTGGTGGGACACTCTGCCACAGCTTAGCTTTGTTAAATACCCCTaGTTTGTTTCACCATTCCAG +
Preference number: 5 (lower is better)
Translates to: TEALTKHVAWWDTLPQLSFVKYP*FVSPFQ
Trigger: CTGGAATGGTGAAACAAACAAGGGGTATTTAACAAA...GCTAAGCTGTGGCAGAGTGTCCCACCACGCTACATGTTTTGTTAAAGCTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS GCA 90 bp TTTGTTGCCTCAAAAATTATATCTAACCAGAAGTTCAGCCGCTCTTaGCTGGGCGAGTGTTCAATAATGGTTTTCTTGAAGCGCCGAATT +
Preference number: 5 (lower is better)
Translates to: FVASKIISNQKFSRS*LGECSIMVFLKRRI
Trigger: AATTCGGCGCTTCAAGAAAACCATTATTGAACACTCGCCCAGGCAAGAGCGGCTGAACTTCTGGTTAGATATAATTTTTGAGGCAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS-3UTR CAA 90 bp AATTTCCTAATATTCCGGGAGGTCAAAACCAAGGCTCACTGTTTTCACAATACAAAGTCCAGGTCCACCTaGAGCTTTGATATTGTGGTC +
Preference number: 5 (lower is better)
Translates to: NFLIFREVKTKAHCFHNTKSRST*SFDIVV
Trigger: GACCACAATATCAAAGCTCAAGGTGGACCTGGACTT...TGTATTGTGAAAACAGTGAGCCTTGGTTTTGACCTCCCGGAATATTAGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS CCA 90 bp ATCACTCTCGCAGCAAAAATAATCAGCGCACGGTGTCACGATGTATaGGATGAAATAATAATTTCCACTGGATGCCTGAAATTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: ITLAAKIISARCHDV*DEIIISTGCLKLVD
Trigger: ATCAACCAATTTCAGGCATCCAGTGGAAATTATTATTTCATCCCATACATCGTGACACCGTGCGCTGATTATTTTTGCTGCGAGAGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518578.5
CDS-3UTR CAA 90 bp TCTTCAACAATCTTTTCAATTGTCTTTGCATCAGCTCCTTGCAGCCGCAACCAGCAACAATCTTTTCAATaGTCTTTGCATCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: SSTIFSIVFASAPCSRNQQQSFQ*SLHQLL
Trigger: AAGGAGCTGATGCAAAGACAATTGAAAAGATTGTTG...CTGGTTGCGGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAGATTGTTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp AATTTCCTAATATTCCGGGAGGTCAAAACCAAGGCTCACTGTTTTCACAATACACAAGGAAGTTTCAAATaGTTGTCCAGCAACAATCAG +
Preference number: 5 (lower is better)
Translates to: NFLIFREVKTKAHCFHNTQGSFK*LSSNNQ
Trigger: CTGATTGTTGCTGGACAACAATTTGAAACTTCCTTG...TGTATTGTGAAAACAGTGAGCCTTGGTTTTGACCTCCCGGAATATTAGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS-3UTR CAA 90 bp AATTTCCTAATATTCCGGGAGGTCAAAACCAAGGCTCACTGTTTTCACAATACATCAATAATGGTTTTCTaGAAGCGCCGAATTAGTAAC +
Preference number: 5 (lower is better)
Translates to: NFLIFREVKTKAHCFHNTSIMVF*KRRISN
Trigger: GTTACTAATTCGGCGCTTCAAGAAAACCATTATTGA...TGTATTGTGAAAACAGTGAGCCTTGGTTTTGACCTCCCGGAATATTAGGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359173.7
CDS GCA 72 bp GCCCCGGCCGGAGCATTCCCACCGCCGCTCTCCATGTaGCCGCCTGCGCGCCCTTCCCCTGGGCGAGTGGCC +
Preference number: 6 (lower is better)
Translates to: APAGAFPPPLSM*PPARPSPGRVA
Trigger: GGCCACTCGCCCAGGGGAAGGGCGCGCAGGCGGGCACATGGAGAGCGGCGGTGGGAATGCTCCGGCCGGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS GCA 72 bp CGGAGCATTCCCACCGCCGCTCTCCATGTGCCCGCCTaGGCGCCCTTCCCCTGGGCGAGTGGCCAGCGGCTG +
Preference number: 6 (lower is better)
Translates to: RSIPTAALHVPA*APFPWASGQRL
Trigger: CAGCCGCTGGCCACTCGCCCAGGGGAAGGGCGCGCAGGCGGGCACATGGAGAGCGGCGGTGGGAATGCTCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS CCA 72 bp GCCGCTCTCCATGTGCCCGCCTGCGCGCCCTTCCCCTaGGCGAGTGGCCAGCGGCTGCGATCCGCTAGGAGG +
Preference number: 6 (lower is better)
Translates to: AALHVPACAPFP*ASGQRLRSARR
Trigger: CCTCCTAGCGGATCGCAGCCGCTGGCCACTCGCCCAGGGGAAGGGCGCGCAGGCGGGCACATGGAGAGCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS TCA 72 bp TCTCCCCGAAGTCCAGCTCCCCGAAGGGCACGGAGGTaGGGTGAGCGCCCTCGGCCTCGCAGGCCCGCAGCA +
Preference number: 6 (lower is better)
Translates to: SPRSPAPRRARR*GERPRPRRPAA
Trigger: TGCTGCGGGCCTGCGAGGCCGAGGGCGCTCACCTCACCTCCGTGCCCTTCGGGGAGCTGGACTTCGGGGAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS GCA 72 bp CCTGCGCGCCCTTCCCCTGGGCGAGTGGCCAGCGGCTaGGATCCGCTAGGAGGCACAAGTTACAGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: PARPSPGRVASG*DPLGGTSYSSR
Trigger: GCGGCTGCTGTAACTTGTGCCTCCTAGCGGATCGCAGCCGCTGGCCACTCGCCCAGGGGAAGGGCGCGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS TCA 72 bp CTCCGGGGACGAGGCCAAGCCCCGGTCTTCCAAGGCTaGGCTCTCGTCTGGAACACTGTGGACAAACACGTG +
Preference number: 6 (lower is better)
Translates to: LRGRGQAPVFQG*ALVWNTVDKHV
Trigger: CACGTGTTTGTCCACAGTGTTCCAGACGAGAGCTCAGCCTTGGAAGACCGGGGCTTGGCCTCGTCCCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470101.1
CDS CAA 90 bp CTGTCCACCAAAGGCATGCACAGCGGGCCCAGGATGTTGTCCCAGTaGGGCTGCATGTACTCGGAGGCTCGTCTCTGGGCATCACTCTCG +
Preference number: 6 (lower is better)
Translates to: LSTKGMHSGPRMLSQ*GCMYSEARLWASLS
Trigger: CGAGAGTGATGCCCAGAGACGAGCCTCCGAGTACATGCAGCCCAACTGGGACAACATCCTGGGCCCGCTGTGCATGCCTTTGGTGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338883.9
ENST00000518578.5
CDS GCA 72 bp ATGCACAGCGGGCCCAGGATGTTGTCCCAGTTGGGCTaGATGTACTCGGAGGCTCGTCTCTGGGCATCACTC +
Preference number: 6 (lower is better)
Translates to: MHSGPRMLSQLG*MYSEARLWASL
Trigger: GAGTGATGCCCAGAGACGAGCCTCCGAGTACATGCAGCCCAACTGGGACAACATCCTGGGCCCGCTGTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338883.9
ENST00000518578.5
CDS CCA 72 bp AAGGCATGCACAGCGGGCCCAGGATGTTGTCCCAGTTaGGCTGCATGTACTCGGAGGCTCGTCTCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: KACTAGPGCCPS*AACTRRLVSGH
Trigger: ATGCCCAGAGACGAGCCTCCGAGTACATGCAGCCCAACTGGGACAACATCCTGGGCCCGCTGTGCATGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338883.9
ENST00000518578.5
CDS CAA 72 bp AAAGGCATGCACAGCGGGCCCAGGATGTTGTCCCAGTaGGGCTGCATGTACTCGGAGGCTCGTCTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: KGMHSGPRMLSQ*GCMYSEARLWA
Trigger: TGCCCAGAGACGAGCCTCCGAGTACATGCAGCCCAACTGGGACAACATCCTGGGCCCGCTGTGCATGCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338883.9
ENST00000518578.5
CDS CAA 72 bp CTGTCCACCAAAGGCATGCACAGCGGGCCCAGGATGTaGTCCCAGTTGGGCTGCATGTACTCGGAGGCTCGT +
Preference number: 6 (lower is better)
Translates to: LSTKGMHSGPRM*SQLGCMYSEAR
Trigger: ACGAGCCTCCGAGTACATGCAGCCCAACTGGGACAACATCCTGGGCCCGCTGTGCATGCCTTTGGTGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338883.9
ENST00000518578.5
CDS CAA 90 bp CTAATGAACCTGTCCACCAAAGGCATGCACAGCGGGCCCAGGATGTaGTCCCAGTTGGGCTGCATGTACTCGGAGGCTCGTCTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: LMNLSTKGMHSGPRM*SQLGCMYSEARLWA
Trigger: TGCCCAGAGACGAGCCTCCGAGTACATGCAGCCCAACTGGGACAACATCCTGGGCCCGCTGTGCATGCCTTTGGTGGACAGGTTCATTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338883.9
ENST00000518578.5
CDS GCA 72 bp CCAGACTGGAGGTTTCAGTTTGAACAACCTCTCTGCTaGCTGGACGGCTTTCCCGACATCATGGGCCAGCAT +
Preference number: 6 (lower is better)
Translates to: PDWRFQFEQPLC*LDGFPDIMGQH
Trigger: ATGCTGGCCCATGATGTCGGGAAAGCCGTCCAGGCAGCAGAGAGGTTGTTCAAACTGAAACCTCCAGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS GCA 72 bp GTACCAGACTGGAGGTTTCAGTTTGAACAACCTCTCTaGTGCCTGGACGGCTTTCCCGACATCATGGGCCAG +
Preference number: 6 (lower is better)
Translates to: VPDWRFQFEQPL*CLDGFPDIMGQ
Trigger: CTGGCCCATGATGTCGGGAAAGCCGTCCAGGCAGCAGAGAGGTTGTTCAAACTGAAACCTCCAGTCTGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS CCA 72 bp ACTGGAGGTTTCAGTTTGAACAACCTCTCTGCTGCCTaGACGGCTTTCCCGACATCATGGGCCAGCATGCTG +
Preference number: 6 (lower is better)
Translates to: TGGFSLNNLSAA*TAFPTSWASML
Trigger: CAGCATGCTGGCCCATGATGTCGGGAAAGCCGTCCAGGCAGCAGAGAGGTTGTTCAAACTGAAACCTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS TCA 72 bp CTGAGGTCAGAACCTCAGTATTATCCATGCGGAGCTTaGTCCGAGCTAGCTCCTTCGCCAGTTCCTCACCTT +
Preference number: 6 (lower is better)
Translates to: LRSEPQYYPCGA*SELAPSPVPHL
Trigger: AAGGTGAGGAACTGGCGAAGGAGCTAGCTCGGATCAAGCTCCGCATGGATAATACTGAGGTTCTGACCTCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS TCA 72 bp CTAATGATCGCAGGTACCAGACTGGAGGTTTCAGTTTaGACAACCTCTCTGCTGCCTGGACGGCTTTCCCGA +
Preference number: 6 (lower is better)
Translates to: LMIAGTRLEVSV*TTSLLPGRLSR
Trigger: TCGGGAAAGCCGTCCAGGCAGCAGAGAGGTTGTTCAAACTGAAACCTCCAGTCTGGTACCTGCGATCATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS CCA 72 bp CTCGGACTCCAAGATGGTAGAAGAGGGAAGGCTGTCTaGAGACATCGCTCATGTCTACCACAGCAACATCTG +
Preference number: 6 (lower is better)
Translates to: LGLQDGRRGKAV*RHRSCLPQQHL
Trigger: CAGATGTTGCTGTGGTAGACATGAGCGATGTCTCCAGACAGCCTTCCCTCTTCTACCATCTTGGAGTCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS CAA 72 bp TCTGAGGTCAGAACCTCAGTATTATCCATGCGGAGCTaGATCCGAGCTAGCTCCTTCGCCAGTTCCTCACCT +
Preference number: 6 (lower is better)
Translates to: SEVRTSVLSMRS*IRASSFASSSP
Trigger: AGGTGAGGAACTGGCGAAGGAGCTAGCTCGGATCAAGCTCCGCATGGATAATACTGAGGTTCTGACCTCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS CAA 72 bp ACTAATGATCGCAGGTACCAGACTGGAGGTTTCAGTTaGAACAACCTCTCTGCTGCCTGGACGGCTTTCCCG +
Preference number: 6 (lower is better)
Translates to: TNDRRYQTGGFS*NNLSAAWTAFP
Trigger: CGGGAAAGCCGTCCAGGCAGCAGAGAGGTTGTTCAAACTGAAACCTCCAGTCTGGTACCTGCGATCATTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS TCA 72 bp AATGGCGCTGTCGCGGCTGGTGTCATCTTTGCAGTCTaGATCCAAGAAGATGTCCTTGTAGATCCTCCCACA +
Preference number: 6 (lower is better)
Translates to: NGAVAAGVIFAV*IQEDVLVDPPT
Trigger: TGTGGGAGGATCTACAAGGACATCTTCTTGGATTCAGACTGCAAAGATGACACCAGCCGCGACAGCGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS TCA 72 bp GAGGTAACTGCGATGCAGTCCCTGTGCTCAAGAAGATaGAATTGCCGGAGGAAGGACAGACATGCAGTGTTC +
Preference number: 6 (lower is better)
Translates to: EVTAMQSLCSRR*NCRRKDRHAVF
Trigger: GAACACTGCATGTCTGTCCTTCCTCCGGCAATTTCATCTTCTTGAGCACAGGGACTGCATCGCAGTTACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470101.1
CDS GCA 72 bp ATGTTAGGACGCCCTGGAGAAGGGCTGAGAGGTAACTaGGATGCAGTCCCTGTGCTCAAGAAGATGAAATTG +
Preference number: 6 (lower is better)
Translates to: MLGRPGEGLRGN*DAVPVLKKMKL
Trigger: CAATTTCATCTTCTTGAGCACAGGGACTGCATCGCAGTTACCTCTCAGCCCTTCTCCAGGGCGTCCTAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470101.1
CDS CCA 72 bp ACCCTTTGCGATACCACTCAATGGCGCTGTCGCGGCTaGTGTCATCTTTGCAGTCTGAATCCAAGAAGATGT +
Preference number: 6 (lower is better)
Translates to: TLCDTTQWRCRG*CHLCSLNPRRC
Trigger: ACATCTTCTTGGATTCAGACTGCAAAGATGACACCAGCCGCGACAGCGCCATTGAGTGGTATCGCAAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS CAA 90 bp ATGATGATGTCTGAGGTCAGAACCTCAGTATTATCCATGCGGAGCTaGATCCGAGCTAGCTCCTTCGCCAGTTCCTCACCTTGGTATTTC +
Preference number: 6 (lower is better)
Translates to: MMMSEVRTSVLSMRS*IRASSFASSSPWYF
Trigger: GAAATACCAAGGTGAGGAACTGGCGAAGGAGCTAGCTCGGATCAAGCTCCGCATGGATAATACTGAGGTTCTGACCTCAGACATCATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS CAA 72 bp GTGTCGGCATCGGTGTCATGGTACAAGATCACATTATaGGCCATGTCAAAGCTTTCTCGGACTCCAAGATGG +
Preference number: 6 (lower is better)
Translates to: VSASVSWYKITL*AMSKLSRTPRW
Trigger: CCATCTTGGAGTCCGAGAAAGCTTTGACATGGCCAATAATGTGATCTTGTACCATGACACCGATGCCGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS CCA 72 bp TGTCGGCATCGGTGTCATGGTACAAGATCACATTATTaGCCATGTCAAAGCTTTCTCGGACTCCAAGATGGT +
Preference number: 6 (lower is better)
Translates to: CRHRCHGTRSHY*PCQSFLGLQDG
Trigger: ACCATCTTGGAGTCCGAGAAAGCTTTGACATGGCCAATAATGTGATCTTGTACCATGACACCGATGCCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338883.9
CDS TCA 72 bp CAGCAAAACTGCAAGATTAATTCCCGAATAGAGGGATaGCTGGAGTTCAAACCCTTTGCGATACCACTCAAT +
Preference number: 6 (lower is better)
Translates to: QQNCKINSRIEG*LEFKPFAIPLN
Trigger: ATTGAGTGGTATCGCAAAGGGTTTGAACTCCAGTCATCCCTCTATTCGGGAATTAATCTTGCAGTTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS TCA 72 bp ATGGTTTTCTTGAAGCGCCGAATTAGTAACAAGTTCTaGACTAATGATCGCAGGTACCAGACTGGAGGTTTC +
Preference number: 6 (lower is better)
Translates to: MVFLKRRISNKF*TNDRRYQTGGF
Trigger: GAAACCTCCAGTCTGGTACCTGCGATCATTAGTTCAGAACTTGTTACTAATTCGGCGCTTCAAGAAAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS GCA 72 bp TCAAAAATTATATCTAACCAGAAGTTCAGCCGCTCTTaGCTGGGCGAGTGTTCAATAATGGTTTTCTTGAAG +
Preference number: 6 (lower is better)
Translates to: SKIISNQKFSRS*LGECSIMVFLK
Trigger: CTTCAAGAAAACCATTATTGAACACTCGCCCAGGCAAGAGCGGCTGAACTTCTGGTTAGATATAATTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338883.9
ENST00000359173.7
ENST00000518578.5
CDS TCA 72 bp AAAAATAATCAGCGCACGGTGTCACGATGTATGGGATaGAATAATAATTTCCACTGGATGCCTGAAATTGGT +
Preference number: 6 (lower is better)
Translates to: KNNQRTVSRCMG*NNNFHWMPEIG
Trigger: ACCAATTTCAGGCATCCAGTGGAAATTATTATTTCATCCCATACATCGTGACACCGTGCGCTGATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518578.5