RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP3K14 (Homo sapiens)

Ensembl gene IDs: ENSG00000006062

Ensembl transcript IDs: ENST00000344686.8, ENST00000376926.8, ENST00000586644.2, ENST00000592267.1, ENST00000617331.3, ENST00000680632.1

Found 867 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGGGTGTCGGTGGGCCGCCCCCGGGCCAGCACCATGTTCCAGCTaGAGCTTCGAGCCTCGGCCTGGCTGCTCCAGGAGTGTACGCCTG +
Preference number: 1 (lower is better)
Translates to: LGCRWAAPGPAPCSS*SFEPRPGCSRSVRL
Trigger: CAGGCGTACACTCCTGGAGCAGCCAGGCCGAGGCTCGAAGCTCCAGCTGGAACATGGTGCTGGCCCGGGGGCGGCCCACCGACACCCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 90 bp CAGGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTaGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCCAGCTG +
Preference number: 1 (lower is better)
Translates to: QGSIVHRAGRLLPAV*SRRWRAGLGPVLQL
Trigger: CAGCTGGAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 90 bp GGCTCAGGTGTGAAATCCTGGGAGGCATTCTGCTTGCCCCCACCTTaGTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCA +
Preference number: 1 (lower is better)
Translates to: GSGVKSWEAFCLPPP*CCEALVPLLSRGLA
Trigger: TGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCAGGATTTCACACCTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CCA 90 bp GACACGCGGTGGATGGGCTCTTTCCTCAGCCCCTCTTGGATGGCCTaGGCTGTGAGAGGGGCGCAGGAGGGTGGGATCTCCCTCACAGGC +
Preference number: 1 (lower is better)
Translates to: DTRWMGSFLSPSWMA*AVRGAQEGGISLTG
Trigger: GCCTGTGAGGGAGATCCCACCCTCCTGCGCCCCTCTCACAGCCCAGGCCATCCAAGAGGGGCTGAGGAAAGAGCCCATCCACCGCGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR TCA 90 bp CAGCTGCTGCAGTTCCTGCTCCGGGACGGTTGCTTTCCGCTCTGGTaGGCTGGGGTTTCTGGCAGGGGCTGGCTCCAGGGAGGACAGAGG +
Preference number: 1 (lower is better)
Translates to: QLLQFLLRDGCFPLW*AGVSGRGWLQGGQR
Trigger: CCTCTGTCCTCCCTGGAGCCAGCCCCTGCCAGAAACCCCAGCTCACCAGAGCGGAAAGCAACCGTCCCGGAGCAGGAACTGCAGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 90 bp GCAGATCCCTGGGAACGGCTGAGCCTGTGTTTCAGGGCAGCATCGTaGACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGT +
Preference number: 1 (lower is better)
Translates to: ADPWERLSLCFRAAS*TEQEGCFRQCGAGG
Trigger: ACCGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCCTGAAACACAGGCTCAGCCGTTCCCAGGGATCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR GCA 90 bp GGGCCAGCACCATGTTCCAGCTGGAGCTTCGAGCCTCGGCCTGGCTaGTCCAGGAGTGTACGCCTGAGCTCAGGGTGTCCCGCGAGCTTT +
Preference number: 1 (lower is better)
Translates to: GPAPCSSWSFEPRPG*SRSVRLSSGCPASF
Trigger: AAAGCTCGCGGGACACCCTGAGCTCAGGCGTACACTCCTGGAGCAGCCAGGCCGAGGCTCGAAGCTCCAGCTGGAACATGGTGCTGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 90 bp AGTGCCCGGTTCACCTTCCCTCCCAGCTCCGCTGCAGACACGCGGTaGATGGGCTCTTTCCTCAGCCCCTCTTGGATGGCCTGGGCTGTG +
Preference number: 1 (lower is better)
Translates to: SARFTFPPSSAADTR*MGSFLSPSWMAWAV
Trigger: CACAGCCCAGGCCATCCAAGAGGGGCTGAGGAAAGAGCCCATCCACCGCGTGTCTGCAGCGGAGCTGGGAGGGAAGGTGAACCGGGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 90 bp TCAGGTGTGAAATCCTGGGAGGCATTCTGCTTGCCCCCACCTTGCTaGTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGAT +
Preference number: 1 (lower is better)
Translates to: SGVKSWEAFCLPPPC*CEALVPLLSRGLAD
Trigger: ATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCAGGATTTCACACCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR GCA 90 bp TCCAGGCGAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATaGCCGAGTCTGGCACCTCCATGTCGTAGCGAACAGGCTGCCCGT +
Preference number: 1 (lower is better)
Translates to: SRRSCHQGPVCTAGR*PSLAPPCRSEQAAR
Trigger: ACGGGCAGCCTGTTCGCTACGACATGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCTTCGCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 90 bp GCCCTGCCAGAGGGCAGCCATGAAAGTGCTTTGAGGTCATCAGAGTaGAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: ALPEGSHESALRSSE*KVPSAVPSGQGQGR
Trigger: CCTGCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCTCAAAGCACTTTCATGGCTGCCCTCTGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CCA 90 bp GCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATGCCCGAGTCTaGCACCTCCATGTCGTAGCGAACAGGCTGCCCGTCTTTGGTGAC +
Preference number: 1 (lower is better)
Translates to: AAIRGQCALQVDARV*HLHVVANRLPVFGD
Trigger: GTCACCAAAGACGGGCAGCCTGTTCGCTACGACATGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 90 bp GCTCAAAGTCAAGGGAGGAGACTTGTTTGGCTCTGGGGGCTCTGGTaGGAGAGGAGGCTGGAGCTTAGGGGCTCTGCCTGTTGTCTCCTC +
Preference number: 1 (lower is better)
Translates to: AQSQGRRLVWLWGLW*ERRLELRGSACCLL
Trigger: GAGGAGACAACAGGCAGAGCCCCTAAGCTCCAGCCTCCTCTCCCACCAGAGCCCCCAGAGCCAAACAAGTCTCCTCCCTTGACTTTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 90 bp AGACTCCTCCTTGCTCAAAGTCAAGGGAGGAGACTTGTTTGGCTCTaGGGGCTCTGGTGGGAGAGGAGGCTGGAGCTTAGGGGCTCTGCC +
Preference number: 1 (lower is better)
Translates to: RLLLAQSQGRRLVWL*GLWWERRLELRGSA
Trigger: GGCAGAGCCCCTAAGCTCCAGCCTCCTCTCCCACCAGAGCCCCCAGAGCCAAACAAGTCTCCTCCCTTGACTTTGAGCAAGGAGGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 90 bp CATCCCAGACTCCTCCTTGCTCAAAGTCAAGGGAGGAGACTTGTTTaGCTCTGGGGGCTCTGGTGGGAGAGGAGGCTGGAGCTTAGGGGC +
Preference number: 1 (lower is better)
Translates to: HPRLLLAQSQGRRLV*LWGLWWERRLELRG
Trigger: GCCCCTAAGCTCCAGCCTCCTCTCCCACCAGAGCCCCCAGAGCCAAACAAGTCTCCTCCCTTGACTTTGAGCAAGGAGGAGTCTGGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 90 bp TCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTGCCCTaGCCTGCCCTGCCAGAGGGCAGCCATGAAAGTGCTTTGAGGTCA +
Preference number: 1 (lower is better)
Translates to: SPHLLACYAPTVSLP*PALPEGSHESALRS
Trigger: TGACCTCAAAGCACTTTCATGGCTGCCCTCTGGCAGGGCAGGGCAGGGCAGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CCA 90 bp CATGCATGTGGACAGCTCAAGACTGTGTCCCTTCACCCCATCTCCTaGCTTGCTATGCTCCTACAGTGTCACTGCCCTGCCCTGCCCTGC +
Preference number: 1 (lower is better)
Translates to: HACGQLKTVSLHPIS*LAMLLQCHCPALPC
Trigger: GCAGGGCAGGGCAGGGCAGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCTTGAGCTGTCCACATGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR GCA 90 bp CCAGGGAGGACAGAGGTAAGGGTTCCCACATCCCAGACTCCTCCTTaGTCAAAGTCAAGGGAGGAGACTTGTTTGGCTCTGGGGGCTCTG +
Preference number: 1 (lower is better)
Translates to: PGRTEVRVPTSQTPP*SKSREETCLALGAL
Trigger: CAGAGCCCCCAGAGCCAAACAAGTCTCCTCCCTTGACTTTGAGCAAGGAGGAGTCTGGGATGTGGGAACCCTTACCTCTGTCCTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 90 bp CGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTaGCAAGATGTGGGAATGAGCTTCTCCCACGGAGTCTCGGCGTCC +
Preference number: 1 (lower is better)
Translates to: REQSDSMWTAGQRLS*QDVGMSFSHGVSAS
Trigger: GGACGCCGAGACTCCGTGGGAGAAGCTCATTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CCA 90 bp TGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCGACTaGAGCAGGGCAGAGAAGATCCTGTTTGTTTCCCGAGGTAACTCC +
Preference number: 1 (lower is better)
Translates to: CQQMVTDPSGSGQLD*SRAEKILFVSRGNS
Trigger: GGAGTTACCTCGGGAAACAAACAGGATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CCA 90 bp GAGGCTCGCTGGCAATCTGCCATGAACTTGGTGAGCCTCCGCAGCTaGATCTCCCCTTGTACCCCCAGATTTGGGTGGCAAGTATTTGAA +
Preference number: 1 (lower is better)
Translates to: EARWQSAMNLVSLRS*ISPCTPRFGWQVFE
Trigger: TTCAAATACTTGCCACCCAAATCTGGGGGTACAAGGGGAGATCCAGCTGCGGAGGCTCACCAAGTTCATGGCAGATTGCCAGCGAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 90 bp TGGAGCAGGGCAGAGAAGATCCTGTTTGTTTCCCGAGGTAACTCCTaGCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCTCAGC +
Preference number: 1 (lower is better)
Translates to: WSRAEKILFVSRGNS*HPPLSLHVAECFLS
Trigger: GCTGAGAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGGAAACAAACAGGATCTTCTCTGCCCTGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CCA 90 bp CTGCTCTGGGGAAGAGTGGTAGCCAGCAGCAAAGGGGCACATGTCTaGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTG +
Preference number: 1 (lower is better)
Translates to: LLWGRVVASSKGAHV*GLRTTSLTHLLWSL
Trigger: CAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATGTGCCCCTTTGCTGCTGGCTACCACTCTTCCCCAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR TCA 90 bp ATGGGTTCTTCTCACTGTCATCCGACAGGGAGAGGCTGTCGATGCTaGGGCACGAGAGAATTTGCTCCTGCTCCTCCAGAGAAAATGGCT +
Preference number: 1 (lower is better)
Translates to: MGSSHCHPTGRGCRC*GTREFAPAPPEKMA
Trigger: AGCCATTTTCTCTGGAGGAGCAGGAGCAAATTCTCTCGTGCCTCAGCATCGACAGCCTCTCCCTGTCGGATGACAGTGAGAAGAACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 90 bp CGGCTGGGCATGGAGGGTCTGGTGGTAATTGGCTTGATTTGGCGGTaGATGTCTTGGTTCTTTATATTCTCCCCTCCAAGGGCTCTTCAG +
Preference number: 1 (lower is better)
Translates to: RLGMEGLVVIGLIWR*MSWFFIFSPPRALQ
Trigger: CTGAAGAGCCCTTGGAGGGGAGAATATAAAGAACCAAGACATCCACCGCCAAATCAAGCCAATTACCACCAGACCCTCCATGCCCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 90 bp ATCTGGCTGCTGATGCCAGTGGCGATGTCTCCCACTTTGACCCGGTaGAACTCCCGGATGTGCAGGTGTTCACCATTAAGAGACTGTATT +
Preference number: 1 (lower is better)
Translates to: IWLLMPVAMSPTLTR*NSRMCRCSPLRDCI
Trigger: AATACAGTCTCTTAATGGTGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCCACTGGCATCAGCAGCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 90 bp CCAGTGGCGATGTCTCCCACTTTGACCCGGTGGAACTCCCGGATGTaGAGGTGTTCACCATTAAGAGACTGTATTTGGACTTTCACACCA +
Preference number: 1 (lower is better)
Translates to: PVAMSPTLTRWNSRM*RCSPLRDCIWTFTP
Trigger: TGGTGTGAAAGTCCAAATACAGTCTCTTAATGGTGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 90 bp GCACATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTaGTCCTTGGCTGAACCAGAGGTCAACTCAGGACCTGTGTTGCAA +
Preference number: 1 (lower is better)
Translates to: AHVWGLRTTSLTHLL*SLAEPEVNSGPVLQ
Trigger: TTGCAACACAGGTCCTGAGTTGACCTCTGGTTCAGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp GCCCCCGGGCCAGCACCATGTTCCAGCTGGAGCTTCGAGCCTCGGCCTGGCTGCCCCTCCCAGCTCCGCTaGAGACACGCGGTGGATGGG +
Preference number: 2 (lower is better)
Translates to: APGPAPCSSWSFEPRPGCPSQLR*RHAVDG
Trigger: CCCATCCACCGCGTGTCTGCAGCGGAGCTGGGAGGG...GCAGCCAGGCCGAGGCTCGAAGCTCCAGCTGGAACATGGTGCTGGCCCGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CCA 90 bp CTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCAGCTTGGGGTGTCGGTaGGCCGCCCCCGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: LLPAVWSRRWRAGLGPVLSLGCR*AAPGPA
Trigger: TGCTGGCCCGGGGGCGGCCCACCGACACCCCAAGCT...GAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR GCA 90 bp CCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTTGCTTGCCCCCACCTTaGTGCTGCGAGGCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: PSRKAASGSVEPAVEGRVCLPPP*CCEALV
Trigger: GACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCA...AACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR GCA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGTGCCCTGCCCTGCCCTaGCAGAGGGCAGCCATGAAA +
Preference number: 2 (lower is better)
Translates to: CEALVPLLSRGLADPWERCPALP*QRAAMK
Trigger: TTTCATGGCTGCCCTCTGGCAGGGCAGGGCAGGGCA...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp CCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCCAGCTGCCCTCTTGGATGGCCTaGGCTGTGAGAGGGGCGCAG +
Preference number: 2 (lower is better)
Translates to: PAVWSRRWRAGLGPVLQLPSWMA*AVRGAQ
Trigger: CTGCGCCCCTCTCACAGCCCAGGCCATCCAAGAGGG...CAGCTGGAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR GCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTGTCACTGCCCTGCCCTaGCCTGCCAGAGGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSVTALP*PARGQP
Trigger: TGGCTGCCCTCTGGCAGGGCAGGGCAGGGCAGTGAC...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTGTCGGCAGTACCCTCTaGCCAGGGGCAGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSVGSTL*PGAGQG
Trigger: ACCCTGCCCTGCCCCTGGCCAGAGGGTACTGCCGAC...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTAGGGGCGCAGGAGGGTaGGATCTCCCTCACAGGCGG +
Preference number: 2 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSRGAGG*DLPHRR
Trigger: CCGCCTGTGAGGGAGATCCCACCCTCCTGCGCCCCT...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CCA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGGTCGATGCCCGAGTCTaGCACCTCCATGTCGTAGCG +
Preference number: 2 (lower is better)
Translates to: CEALVPLLSRGLADPWERVDARV*HLHVVA
Trigger: CGCTACGACATGGAGGTGCCAGACTCGGGCATCGAC...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR GCA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGCATCAGAGTGCAAAGTaGCGTCGGCAGTACCCTCTG +
Preference number: 2 (lower is better)
Translates to: CEALVPLLSRGLADPWERHQSAK*RRQYPL
Trigger: CAGAGGGTACTGCCGACGGCACTTTGCACTCTGATG...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTCTGCTTCCGGCAGTGTaGAGCCGGCGGTGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPLLPAV*SRRWRA
Trigger: TGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp CTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCGCTGCAGACACGCGGTaGATGGGCTCTTTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: LLPAVWSRRWRAGLGPVLAADTR*MGSFLS
Trigger: GCTGAGGAAAGAGCCCATCCACCGCGTGTCTGCAGC...GAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGTCCGCTCTGGTGAGCTaGGGTTTCTGGCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: STLDTDSGAGAPERLSLLSALVS*GFWQGL
Trigger: CAGCCCCTGCCAGAAACCCCAGCTCACCAGAGCGGA...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR TCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCGGTGAGCTGGCCAGGTaGGGCCAGGCAAGGGGTTTA +
Preference number: 2 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGGELAR*GQARGL
Trigger: TAAACCCCTTGCCTGGCCTCACCTGGCCAGCTCACC...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp CTGGCTGCTGATGCCAGTGGCGATGTCTCCCACTTTGACCCGGTGGAACTCCCGACTCTCACAGCAGCCTaGAGGGTGAGGGGCCGAGGG +
Preference number: 2 (lower is better)
Translates to: LAADASGDVSHFDPVELPTLTAA*RVRGRG
Trigger: CCCTCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGT...CGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCCACTGGCATCAGCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCGTCGGCAGTACCCTCTaGCCAGGGGCAGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPVGSTL*PGAGQG
Trigger: ACCCTGCCCTGCCCCTGGCCAGAGGGTACTGCCGAC...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp CCTGGCTGCTCCAGGAGTGTACGCCTGAGCTCAGGGTGTCCCGCGAGCTTTGAGGGTGGGAGAGGAGGCTaGAGCTTAGGGGCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: PGCSRSVRLSSGCPASFEGGRGG*SLGALP
Trigger: AGGCAGAGCCCCTAAGCTCCAGCCTCCTCTCCCACC...CTCAAAGCTCGCGGGACACCCTGAGCTCAGGCGTACACTCCTGGAGCAGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CCA 90 bp CCATGCTTGACCCTCCAGCTCCAGGCGAAGCTGCCATCAGGGGCCAGTGTGCACGTTTCTGGCAGGGGCTaGCTCCAGGGAGGACAGAGG +
Preference number: 2 (lower is better)
Translates to: PCLTLQLQAKLPSGASVHVSGRG*LQGGQR
Trigger: CCTCTGTCCTCCCTGGAGCCAGCCCCTGCCAGAAAC...GTGCACACTGGCCCCTGATGGCAGCTTCGCCTGGAGCTGGAGGGTCAAGCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR TCA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGGCTTTGAGAGGCCTTTaGTGGGTTCTTCTCACTGTC +
Preference number: 2 (lower is better)
Translates to: CEALVPLLSRGLADPWERALRGL*WVLLTV
Trigger: GACAGTGAGAAGAACCCATCAAAGGCCTCTCAAAGC...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR TCA 90 bp TTGGACTTTCACACCATTGAAATAGCTTGGGGTGTCGGTGGGCCGCCCCCGGGCCCAGGAGTGTACGCCTaGGCTCAGGGTGTCCCGCGA +
Preference number: 2 (lower is better)
Translates to: LDFHTIEIAWGVGGPPPGPGVYA*AQGVPR
Trigger: TCGCGGGACACCCTGAGCTCAGGCGTACACTCCTGG...GCCCGGGGGCGGCCCACCGACACCCCAAGCTATTTCAATGGTGTGAAAGTCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR GCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCACCGAGCAGGAAGGCTaGTTCCGGCAGTGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPTEQEG*FRQCGA
Trigger: GGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGT...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp GAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACTTCAGGGCAGCATCGTaGACCGAGCAGGAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: EAAIRGQCALQVDARVWHFRAAS*TEQEGC
Trigger: GCAGCCTTCCTGCTCGGTGCACGATGCTGCCCTGAA...GTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR GCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTGCTTGCCCCCACCTTaGTGCTGCGAGGCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPCLPPP*CCEALV
Trigger: GACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCA...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCCTCCTACAGTGTCACTaGCCTGCCCTGCCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPLLQCH*PALPCQ
Trigger: CTGGCAGGGCAGGGCAGGGCAGTGACACTGTAGGAG...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp GGCGATGTCTCCCACTTTGACCCGGTGGAACTCCCGGATGTGCAGGTGTTCACCGAGCCTCGGCCTGGCTaGTCCAGGAGTGTACGCCTG +
Preference number: 2 (lower is better)
Translates to: GDVSHFDPVELPDVQVFTEPRPG*SRSVRL
Trigger: CAGGCGTACACTCCTGGAGCAGCCAGGCCGAGGCTC...GGTGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CCA 90 bp GCCCCCGGGCCAGCACCATGTTCCAGCTGGAGCTTCGAGCCTCGGCCTGGCTGCCTCTGTCTCTTCACGTaGCGGAGTGTTTTCTCAGCA +
Preference number: 2 (lower is better)
Translates to: APGPAPCSSWSFEPRPGCLCLFT*RSVFSA
Trigger: TGCTGAGAAAACACTCCGCCACGTGAAGAGACAGAG...GCAGCCAGGCCGAGGCTCGAAGCTCCAGCTGGAACATGGTGCTGGCCCGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCACTCTCACAGCAGCCTaGAGGGTGAGGGGCCGAGGG +
Preference number: 2 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPTLTAA*RVRGRG
Trigger: CCCTCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGT...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGAAAGGGGCACATGTCTaGGGACTGAGAACCACTTCA +
Preference number: 2 (lower is better)
Translates to: CEALVPLLSRGLADPWERKGAHV*GLRTTS
Trigger: TGAAGTGGTTCTCAGTCCCCAGACATGTGCCCCTTT...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCGAGTGCCAGCGAGTCTaGGGCAGTGCTGGGCCTGAA +
Preference number: 2 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPECQRV*GSAGPE
Trigger: TTCAGGCCCAGCACTGCCCCAGACTCGCTGGCACTC...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGGTGAGCCTCCGCAGCTaGATCTCCCCTTGTACCCCC +
Preference number: 2 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLVSLRS*ISPCTP
Trigger: GGGGGTACAAGGGGAGATCCAGCTGCGGAGGCTCAC...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR TCA 90 bp GAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACGTGTCCCGCGAGCTTTaGGAGGCCTTTGATGGGTTC +
Preference number: 2 (lower is better)
Translates to: EAAIRGQCALQVDARVWHVSREL*EAFDGF
Trigger: GAACCCATCAAAGGCCTCTCAAAGCTCGCGGGACAC...GTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR GCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCTTCAGGGCAGCATCGTaGACCGAGCAGGAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: SGAGAPERLSLLLSLALIFRAAS*TEQEGC
Trigger: GCAGCCTTCCTGCTCGGTGCACGATGCTGCCCTGAA...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATAGTCTCGGCGTCCCCTaGCCCAGGAGGTTGAGGCTA +
Preference number: 2 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHSLGVP*PRRLRL
Trigger: TAGCCTCAACCTCCTGGGGCAGGGGACGCCGAGACT...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCCTGCTTCCGGCAGTGTaGAGCCGGCGGTGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGLLPAV*SRRWRA
Trigger: TGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACGTGTGGAGCCGGCGGTaGAGGGCAGGGTTAGGGCCT +
Preference number: 2 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHVWSRR*RAGLGP
Trigger: AGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACAC...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR TCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATATCCCTGGGAACGGCTaGGCCTGTGTTTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHIPGNG*ACVSGQ
Trigger: CTGCCCTGAAACACAGGCTCAGCCGTTCCCAGGGAT...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATTTCAGGGCAGCATCGTaGACCGAGCAGGAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHFRAAS*TEQEGC
Trigger: GCAGCCTTCCTGCTCGGTGCACGATGCTGCCCTGAA...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACACAGTGTCACTGCCCTaGCCTGCCCTGCCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHTVSLP*PALPEG
Trigger: GCCCTCTGGCAGGGCAGGGCAGGGCAGTGACACTGT...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCCTCCTACAGTGTCACTaGCCTGCCCTGCCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLLLQCH*PALPCQ
Trigger: CTGGCAGGGCAGGGCAGGGCAGTGACACTGTAGGAG...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTTCAGGTGTGAAATCCTaGGAGGCATTCTGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSSGVKS*EAFCLP
Trigger: GGGCAAGCAGAATGCCTCCCAGGATTTCACACCTGA...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCCAGTTCTTTATGTGCTaGGGGCCGGGGCTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPQFFMC*GPGLSP
Trigger: GGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTG...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp GTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACCTCCATGTCGTAGCGAACAGGGCAGGGCTCAGGTGTaGAATCCTGGGAGGCATTCT +
Preference number: 2 (lower is better)
Translates to: VCTAGRCPSLAPPCRSEQGRAQV*NPGRHS
Trigger: AGAATGCCTCCCAGGATTTCACACCTGAGCCCTGCC...CTGTTCGCTACGACATGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR GCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCCTGCTGACCTGGTTCTaGACTGAACCTGAGTTTGGG +
Preference number: 2 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGLLTWF*TEPEFG
Trigger: CCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAG...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTCTCCTACAGTGTCACTaGCCTGCCCTGCCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSLLQCH*PALPCQ
Trigger: CTGGCAGGGCAGGGCAGGGCAGTGACACTGTAGGAG...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATCTGCAGTTCTTTATGTaGTGGGGGCCGGGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHLQFFM*WGPGLS
Trigger: AGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAG...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTGGACAAAGGCTGTCTTaGCAAGATGTGGGAATGAGC +
Preference number: 2 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSGQRLS*QDVGMS
Trigger: GCTCATTCCCACATCTTGCCAAGACAGCCTTTGTCC...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCCAGGCGGAGGCTCGCTaGCAATCTGCCATGAACTTG +
Preference number: 2 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPQAEAR*QSAMNL
Trigger: CAAGTTCATGGCAGATTGCCAGCGAGCCTCCGCCTG...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR TCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTATCCCTGGGAACGGCTaGGCCTGTGTTTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSIPGNG*ACVSGQ
Trigger: CTGCCCTGAAACACAGGCTCAGCCGTTCCCAGGGAT...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCCACATGTCTGGGGACTaGGAACCACTTCACTTACAC +
Preference number: 2 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGHMSGD*EPLHLH
Trigger: GTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATGTG...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTCCTGGGAGGCATTCTaGTTGCCCCCACCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSSWEAF*LPPPCC
Trigger: GCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCAGGA...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTTCCTGGGAGGCATTCTaGTTGCCCCCACCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: PFTFTDEGTECQRVWGSASWEAF*LPPPCC
Trigger: GCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCAGGA...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCTCCCGAGGTAACTCCTaGCATCCTCCTCTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: SGAGAPERLSLLLSLALISRGNS*HPPLSL
Trigger: AAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGGA...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CCTGGCTGCTCCAGGAGTGTACGCCTGAGCTCAGGGTGTCCCGCGAGCTTTGAGAATTCTATTTCCAGCTaGTGCAGTTCCTGCTCCGGG +
Preference number: 2 (lower is better)
Translates to: PGCSRSVRLSSGCPASFENSISS*CSSCSG
Trigger: CCCGGAGCAGGAACTGCAGCAGCTGGAAATAGAATT...CTCAAAGCTCGCGGGACACCCTGAGCTCAGGCGTACACTCCTGGAGCAGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGACCTTCTTTGGTCCTTaGCTGAACCAGAGGTCAACT +
Preference number: 2 (lower is better)
Translates to: STLDTDSGAGAPERLSLLTFFGP*LNQRST
Trigger: AGTTGACCTCTGGTTCAGCCAAGGACCAAAGAAGGT...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTTACACACCTTCTTTaGTCCTTGGCTGAACCAGAG +
Preference number: 2 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSLTHLL*SLAEPE
Trigger: CTCTGGTTCAGCCAAGGACCAAAGAAGGTGTGTAAG...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCAGACTTGTTTGGCTCTaGGGGCTCTGGTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLRLVWL*GLWWER
Trigger: CCTCTCCCACCAGAGCCCCCAGAGCCAAACAAGTCT...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CAA 90 bp GGAATAATTCTATTTCCAGCTGCTGCAGTTCCTGCTCCGGGACGGTaGCTTTCCGCTCTGGTGAGCTGGGGTTTCTGGCAGGGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: GIILFPAAAVPAPGR*LSALVSWGFWQGLA
Trigger: AGCCAGCCCCTGCCAGAAACCCCAGCTCACCAGAGCGGAAAGCAACCGTCCCGGAGCAGGAACTGCAGCAGCTGGAAATAGAATTATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CAA 90 bp GCAGCTGGGATCTGGCTGCTGATGCCAGTGGCGATGTCTCCCACTTaGACCCGGTGGAACTCCCGGATGTGCAGGTGTTCACCATTAAGA +
Preference number: 2 (lower is better)
Translates to: AAGIWLLMPVAMSPT*TRWNSRMCRCSPLR
Trigger: TCTTAATGGTGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCCACTGGCATCAGCAGCCAGATCCCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR TCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCGGCAGGGCTCAGGTGTaGAATCCTGGGAGGCATTCT +
Preference number: 2 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGGRAQV*NPGRHS
Trigger: AGAATGCCTCCCAGGATTTCACACCTGAGCCCTGCC...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTCCAGCAAATGGTCACTaGTCCAAGCGGGTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: PFTFTDEGTECQRVWGSAPANGH*SKRVRP
Trigger: TGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGG...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGATCCCGAGGTAACTCCTaGCATCCTCCTCTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRSRGNS*HPPLSL
Trigger: AAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGGA...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATCTGCTCTCCCCTGTCTaGCAGCAAATGGTCACTGAT +
Preference number: 2 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHLLSPV*QQMVTD
Trigger: ATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCAG...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCCATCAGAGTGCAAAGTaGCGTCGGCAGTACCCTCTG +
Preference number: 2 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLHQSAK*RRQYPL
Trigger: CAGAGGGTACTGCCGACGGCACTTTGCACTCTGATG...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCTGCTTCCGGCAGTGTaGAGCCGGCGGTGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVLLPAV*SRRWRA
Trigger: TGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTTGGCGGTGGATGTCTTaGTTCTTTATATTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSWRWMS*FFIFSP
Trigger: AGGGGAGAATATAAAGAACCAAGACATCCACCGCCA...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CAA 90 bp TCCAGGGAGGACAGAGGTAAGGGTTCCCACATCCCAGACTCCTCCTaGCTCAAAGTCAAGGGAGGAGACTTGTTTGGCTCTGGGGGCTCT +
Preference number: 2 (lower is better)
Translates to: SREDRGKGSHIPDSS*LKVKGGDLFGSGGS
Trigger: AGAGCCCCCAGAGCCAAACAAGTCTCCTCCCTTGACTTTGAGCAAGGAGGAGTCTGGGATGTGGGAACCCTTACCTCTGTCCTCCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR TCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATCTAGCAGACACCCCCTaGCGATTCACAGCTGATTTA +
Preference number: 2 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHLADTP*RFTADL
Trigger: TAAATCAGCTGTGAATCGTCAGGGGGTGTCTGCTAG...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTTGCTTGCCCCCACCTTaGTGCTGCGAGGCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLACLPPP*CCEALV
Trigger: GACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCA...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCCTGCTCTCCCCTGTCTaGCAGCAAATGGTCACTGAT +
Preference number: 2 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLLLSPV*QQMVTD
Trigger: ATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCAG...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCTCTCCTGGCTTGCTATaGTCCTACAGTGTCACTGCC +
Preference number: 2 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLSPGLL*SYSVTA
Trigger: GGCAGTGACACTGTAGGAGCATAGCAAGCCAGGAGA...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCTCAGGTGTGAAATCCTaGGAGGCATTCTGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLSGVKS*EAFCLP
Trigger: GGGCAAGCAGAATGCCTCCCAGGATTTCACACCTGA...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCCTGTCTGCCAGCAAATaGTCACTGATCCAAGCGGGT +
Preference number: 2 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLLSASK*SLIQAG
Trigger: ACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAG...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAAACTCTCACAGCAGCCTaGAGGGTGAGGGGCCGAGGG +
Preference number: 2 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWETLTAA*RVRGRG
Trigger: CCCTCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGT...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTACCTTCTTTGGTCCTTaGCTGAACCAGAGGTCAACT +
Preference number: 2 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPTFFGP*LNQRST
Trigger: AGTTGACCTCTGGTTCAGCCAAGGACCAAAGAAGGT...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACGGGGCCTGCTGCTCTaGGGAAGAGTGGTAGCCAGC +
Preference number: 2 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWERGLLL*GRVVAS
Trigger: GCTGGCTACCACTCTTCCCCAGAGCAGCAGGCCCCG...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTGGTGAGCTGGCCAGGTaGGGCCAGGCAAGGGGTTTA +
Preference number: 2 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVGELAR*GQARGL
Trigger: TAAACCCCTTGCCTGGCCTCACCTGGCCAGCTCACC...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTCTCCTGGCTTGCTATaGTCCTACAGTGTCACTGCC +
Preference number: 2 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSSPGLL*SYSVTA
Trigger: GGCAGTGACACTGTAGGAGCATAGCAAGCCAGGAGA...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAAGAGTGCCAGCGAGTCTaGGGCAGTGCTGGGCCTGAA +
Preference number: 2 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEECQRV*GSAGPE
Trigger: TTCAGGCCCAGCACTGCCCCAGACTCGCTGGCACTC...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CAA 90 bp GCTCTCTCGGCTGGGCATGGAGGGTCTGGTGGTAATTGGCTTGATTaGGCGGTGGATGTCTTGGTTCTTTATATTCTCCCCTCCAAGGGC +
Preference number: 2 (lower is better)
Translates to: ALSAGHGGSGGNWLD*AVDVLVLYILPSKG
Trigger: GCCCTTGGAGGGGAGAATATAAAGAACCAAGACATCCACCGCCAAATCAAGCCAATTACCACCAGACCCTCCATGCCCAGCCGAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR TCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTATCCCTGGGAACGGCTaGGCCTGTGTTTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLAIPGNG*ACVSGQ
Trigger: CTGCCCTGAAACACAGGCTCAGCCGTTCCCAGGGAT...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGACCAGCAAATGGTCACTaGTCCAAGCGGGTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGPANGH*SKRVRP
Trigger: TGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGG...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGGGCGGGCATACCTGCTaGCCTGGTTCTGCACTGAAC +
Preference number: 2 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRGGHTC*PGSALN
Trigger: GTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCC...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCAGCAAATGGTCACTaGTCCAAGCGGGTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVPANGH*SKRVRP
Trigger: TGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGG...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGGGGCCCTTACACACTTaGCACTCTCACAGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRGPLHT*HSHSSL
Trigger: CAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCC...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTTCTTTGGTCCTTGGCTaGACCAGAGGTCAACTCAGG +
Preference number: 2 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTSLVLG*TRGQLR
Trigger: CCTGAGTTGACCTCTGGTTCAGCCAAGGACCAAAGA...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAATGTGATGCTGAGCTGTaGTCTGGGGAACCAGCACGC +
Preference number: 2 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWECDAEL*SGEPAR
Trigger: GCGTGCTGGTTCCCCAGAGCACAGCTCAGCATCACA...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGAACTCCCGGATGTaGAGGTGTTCACCATTAAGA +
Preference number: 2 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSWNSRM*RCSPLR
Trigger: TCTTAATGGTGAACACCTGCACATCCGGGAGTTCCA...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTGCATACCTGCTGACCTaGTTCTGCACTGAACCTGAG +
Preference number: 2 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTAYLLT*FCTEPE
Trigger: CTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGC...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATGGTGAGCTGGCCAGGTaGGGCCAGGCAAGGGGTTTA +
Preference number: 2 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHGELAR*GQARGL
Trigger: TAAACCCCTTGCCTGGCCTCACCTGGCCAGCTCACC...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTAAAGGGGCACATGTCTaGGGACTGAGAACCACTTCA +
Preference number: 2 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTKGAHV*GLRTTS
Trigger: TGAAGTGGTTCTCAGTCCCCAGACATGTGCCCCTTT...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CAA 90 bp GTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTaGGCTGAACCAGAGGTCAACTCAGGACCTGTGTTGCAACAACCT +
Preference number: 2 (lower is better)
Translates to: VWGLRTTSLTHLLWS*AEPEVNSGPVLQQP
Trigger: AGGTTGTTGCAACACAGGTCCTGAGTTGACCTCTGGTTCAGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATGGCGGGCATACCTGCTaGCCTGGTTCTGCACTGAAC +
Preference number: 2 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHGGHTC*PGSALN
Trigger: GTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCC...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGACACATGTCTGGGGACTaGGAACCACTTCACTTACAC +
Preference number: 2 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGHMSGD*EPLHLH
Trigger: GTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATGTG...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTAGAGGCTGTCGATGCTaGGGCACGAGAGAATTTGCT +
Preference number: 2 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVRGCRC*GTREFA
Trigger: AGCAAATTCTCTCGTGCCTCAGCATCGACAGCCTCT...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR GCA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGTCCCGAGGTAACTCCTaGCATCCTCCTCTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRSRGNS*HPPLSL
Trigger: AAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGGA...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGATTGAGGTCATCAGAGTaGAAAGTGCCGTCGGCAGTA +
Preference number: 2 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGLRSSE*KVPSAV
Trigger: TACTGCCGACGGCACTTTGCACTCTGATGACCTCAA...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCCACCCCAAACTTTATTaGTTACAAAGAGTTCTCTAC +
Preference number: 2 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPHPKLY*LQRVLY
Trigger: GTAGAGAACTCTTTGTAAGCAATAAAGTTTGGGGTG...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCAGGCACGAGAGAATTTaGTCCTGCTCCTCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: YPASPFTFTDEGTECQRVRHERI*SCSSRE
Trigger: TTCTCTGGAGGAGCAGGAGCAAATTCTCTCGTGCCT...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CCA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGCTGTCTGCCAGCAAATaGTCACTGATCCAAGCGGGT +
Preference number: 2 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRLSASK*SLIQAG
Trigger: ACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAG...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTCTGTCTGCCAGCAAATaGTCACTGATCCAAGCGGGT +
Preference number: 2 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLALSASK*SLIQAG
Trigger: ACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAG...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAAGCATACCTGCTGACCTaGTTCTGCACTGAACCTGAG +
Preference number: 2 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEAYLLT*FCTEPE
Trigger: CTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGC...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCTCCTCCAGAGAAAATaGCTGGGACAGGCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVLLQRK*LGQAVE
Trigger: CTCAACAGCCTGTCCCAGCCATTTTCTCTGGAGGAG...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CAA 90 bp GCAATGGGGAAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTaGAGGAGTCACATGCATGTGGACAGCTCAAGACTGTGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: AMGKGVLFLEKSGRG*RSHMHVDSSRLCPF
Trigger: GAAGGGACACAGTCTTGAGCTGTCCACATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTTCCCCATTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCTGTGTTGCAACAACCTaGAAAGTGTGGTGTATTCTA +
Preference number: 2 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGCVATT*KVWCIL
Trigger: TAGAATACACCACACTTTTCAGGTTGTTGCAACACA...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACACATGTCTGGGGACTaGGAACCACTTCACTTACAC +
Preference number: 2 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEHMSGD*EPLHLH
Trigger: GTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATGTG...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGACCGAGCAGGAAGGCTaGTTCCGGCAGTGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKTEQEG*FRQCGA
Trigger: GGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGT...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACTCTGTCTCTTCACGTaGCGGAGTGTTTTCTCAGCA +
Preference number: 2 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWELCLFT*RSVFSA
Trigger: TGCTGAGAAAACACTCCGCCACGTGAAGAGACAGAG...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACAGTCTGACTCAATGTaGACAGCTGGACAAAGGCTG +
Preference number: 2 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEQSDSM*TAGQRL
Trigger: CAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATCATCAGAGTGCAAAGTaGCGTCGGCAGTACCCTCTG +
Preference number: 2 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHHQSAK*RRQYPL
Trigger: CAGAGGGTACTGCCGACGGCACTTTGCACTCTGATG...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR GCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTCACCCCAAACTTTATTaGTTACAAAGAGTTCTCTAC +
Preference number: 2 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSHPKLY*LQRVLY
Trigger: GTAGAGAACTCTTTGTAAGCAATAAAGTTTGGGGTG...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTATTCTTAGAGAAATCTaGAAGAGGTTTGAGGAGTCA +
Preference number: 2 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSILREI*KRFEES
Trigger: TGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAAT...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTATTCTTAGAGAAATCTaGAAGAGGTTTGAGGAGTCA +
Preference number: 2 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTILREI*KRFEES
Trigger: TGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAAT...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATCTTACACACCTTCTTTaGTCCTTGGCTGAACCAGAG +
Preference number: 2 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHLTHLL*SLAEPE
Trigger: CTCTGGTTCAGCCAAGGACCAAAGAAGGTGTGTAAG...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR TCA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGGCCATGAAAGTGCTTTaGGGTCATCAGAGTGCAAAG +
Preference number: 2 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKAMKVL*GHQSAK
Trigger: CTTTGCACTCTGATGACCTCAAAGCACTTTCATGGC...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CCA 72 bp CGGTGGGCCGCCCCCGGGCCAGCACCATGTTCCAGCTaGAGCTTCGAGCCTCGGCCTGGCTGCTCCAGGAGT +
Preference number: 3 (lower is better)
Translates to: RWAAPGPAPCSS*SFEPRPGCSRS
Trigger: ACTCCTGGAGCAGCCAGGCCGAGGCTCGAAGCTCCAGCTGGAACATGGTGCTGGCCCGGGGGCGGCCCACCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 72 bp GGCTCTGCCTGTTGTCTCCTCAGCTGGCCGGGGCCCTaGGGCCCTTGGCGAAAGCTCTCTCGGCTGGGCATG +
Preference number: 3 (lower is better)
Translates to: GSACCLLSWPGP*GPWRKLSRLGM
Trigger: CATGCCCAGCCGAGAGAGCTTTCGCCAAGGGCCCCAGGGCCCCGGCCAGCTGAGGAGACAACAGGCAGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 72 bp GCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGTaGAGGGCAGGGTTAGGGCCTGTTCTCCAGCTGGCC +
Preference number: 3 (lower is better)
Translates to: AGRLLPAVWSRR*RAGLGPVLQLA
Trigger: GGCCAGCTGGAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp CCTGGCTGCTCCAGGAGTGTACGCCTGAGCTCAGGGTGTCCCGCGAGCTTTGAGGGGGCCCTGGGGCCCTaGGCGAAAGCTCTCTCGGCT +
Preference number: 3 (lower is better)
Translates to: PGCSRSVRLSSGCPASFEGALGP*AKALSA
Trigger: AGCCGAGAGAGCTTTCGCCAAGGGCCCCAGGGCCCC...CTCAAAGCTCGCGGGACACCCTGAGCTCAGGCGTACACTCCTGGAGCAGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCCTGCTTGCCCCCACCTaGCTGCTGCGAGGCCCTGGT +
Preference number: 3 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGLLAPT*LLRGPG
Trigger: ACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCAG...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CAA 90 bp CTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCGCGATGTCTCCCACTTaGACCCGGTGGAACTCCCGG +
Preference number: 3 (lower is better)
Translates to: LLPAVWSRRWRAGLGPVLAMSPT*TRWNSR
Trigger: CCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGC...GAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 72 bp TGTTTCAGGGCAGCATCGTGCACCGAGCAGGAAGGCTaGTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: CFRAASCTEQEG*FRQCGAGGGGQ
Trigger: CTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCCTGAAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR TCA 72 bp TCGAGCCTCGGCCTGGCTGCTCCAGGAGTGTACGCCTaGGCTCAGGGTGTCCCGCGAGCTTTGAGAGGCCTT +
Preference number: 3 (lower is better)
Translates to: SSLGLAAPGVYA*AQGVPRALRGL
Trigger: AAGGCCTCTCAAAGCTCGCGGGACACCCTGAGCTCAGGCGTACACTCCTGGAGCAGCCAGGCCGAGGCTCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 72 bp GTGAAATCCTGGGAGGCATTCTGCTTGCCCCCACCTTaGTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGG +
Preference number: 3 (lower is better)
Translates to: VKSWEAFCLPPP*CCEALVPLLSR
Trigger: CCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCAGGATTTCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR GCA 72 bp CCATGTTCCAGCTGGAGCTTCGAGCCTCGGCCTGGCTaGTCCAGGAGTGTACGCCTGAGCTCAGGGTGTCCC +
Preference number: 3 (lower is better)
Translates to: PCSSWSFEPRPG*SRSVRLSSGCP
Trigger: GGGACACCCTGAGCTCAGGCGTACACTCCTGGAGCAGCCAGGCCGAGGCTCGAAGCTCCAGCTGGAACATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 72 bp TCCAGCTCCAGGCGAAGCTGCCATCAGGGGCCAGTGTaGACTGCAGGTCGATGCCCGAGTCTGGCACCTCCA +
Preference number: 3 (lower is better)
Translates to: SSSRRSCHQGPV*TAGRCPSLAPP
Trigger: TGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCTTCGCCTGGAGCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 72 bp AGGGGCCAGTGTGCACTGCAGGTCGATGCCCGAGTCTaGCACCTCCATGTCGTAGCGAACAGGCTGCCCGTC +
Preference number: 3 (lower is better)
Translates to: RGQCALQVDARV*HLHVVANRLPV
Trigger: GACGGGCAGCCTGTTCGCTACGACATGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCTGGGAGGCATTCTGCTaGCCCCCACCTTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGWEAFC*PPPCCC
Trigger: GCAGCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCA...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CCA 72 bp TTCACCTTCCCTCCCAGCTCCGCTGCAGACACGCGGTaGATGGGCTCTTTCCTCAGCCCCTCTTGGATGGCC +
Preference number: 3 (lower is better)
Translates to: FTFPPSSAADTR*MGSFLSPSWMA
Trigger: GGCCATCCAAGAGGGGCTGAGGAAAGAGCCCATCCACCGCGTGTCTGCAGCGGAGCTGGGAGGGAAGGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCTGGGAGGCATTCTGCTaGCCCCCACCTTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPWEAFC*PPPCCC
Trigger: GCAGCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCA...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CAA 90 bp TTGGACTTTCACACCATTGAAATAGCTTGGGGTGTCGGTGGGCCGCCCCCGGGCCCTGCTCCGGGACGGTaGCTTTCCGCTCTGGTGAGC +
Preference number: 3 (lower is better)
Translates to: LDFHTIEIAWGVGGPPPGPAPGR*LSALVS
Trigger: GCTCACCAGAGCGGAAAGCAACCGTCCCGGAGCAGG...GCCCGGGGGCGGCCCACCGACACCCCAAGCTATTTCAATGGTGTGAAAGTCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACCCCTGCCCCAGGAGGTaGAGGCTAGCAGACACCCCC +
Preference number: 3 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHPCPRR*RLADTP
Trigger: GGGGGTGTCTGCTAGCCTCAACCTCCTGGGGCAGGG...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR GCA 72 bp AGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATaGCCGAGTCTGGCACCTCCATGTCGTAGCGAACAG +
Preference number: 3 (lower is better)
Translates to: SCHQGPVCTAGR*PSLAPPCRSEQ
Trigger: CTGTTCGCTACGACATGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR TCA 72 bp CAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAATaGGCTTCTCCCACGGAGTCTCGGCGTCCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: QLDKGCLGKMWE*ASPTESRRPLP
Trigger: GGGCAGGGGACGCCGAGACTCCGTGGGAGAAGCTCATTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR TCA 72 bp GAAGCTGCTCTCCCCTGTCTGCCAGCAAATGGTCACTaGTCCAAGCGGGTCAGGCCAACTCGACTGGAGCAG +
Preference number: 3 (lower is better)
Translates to: EAALPCLPANGH*SKRVRPTRLEQ
Trigger: CTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR GCA 72 bp GAGGGCAGCCATGAAAGTGCTTTGAGGTCATCAGAGTaGAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: EGSHESALRSSE*KVPSAVPSGQG
Trigger: CCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCTCAAAGCACTTTCATGGCTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR GCA 72 bp AACAGGCTGCCCGTCTTTGGTGACCAAGCTGAAGGCTaGAGCTGGGATCTGGCTGCTGATGCCAGTGGCGAT +
Preference number: 3 (lower is better)
Translates to: NRLPVFGDQAEG*SWDLAADASGD
Trigger: ATCGCCACTGGCATCAGCAGCCAGATCCCAGCTGCAGCCTTCAGCTTGGTCACCAAAGACGGGCAGCCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 72 bp GCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTaGTTCTGCACTGAACCTGAGTTTGGGCCCTTACAC +
Preference number: 3 (lower is better)
Translates to: APLTYGRAYLLT*FCTEPEFGPLH
Trigger: GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CAA 90 bp GCCTTTGATGGGTTCTTCTCACTGTCATCCGACAGGGAGAGGCTGTCGATGCTGTGGGAGGCATTCTGCTaGCCCCCACCTTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: AFDGFFSLSSDRERLSMLWEAFC*PPPCCC
Trigger: GCAGCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCA...CAGCATCGACAGCCTCTCCCTGTCGGATGACAGTGAGAAGAACCCATCAAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp TTGGACTTTCACACCATTGAAATAGCTTGGGGTGTCGGTGGGCCGCCCCCGGGCTGGGCCCTTACACACTaGACACTCTCACAGCAGCCT +
Preference number: 3 (lower is better)
Translates to: LDFHTIEIAWGVGGPPPGWALTH*TLSQQP
Trigger: AGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCA...GCCCGGGGGCGGCCCACCGACACCCCAAGCTATTTCAATGGTGTGAAAGTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTGCACTGAACCTGAGTTaGGGCCCTTACACACTTGAC +
Preference number: 3 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPALNLS*GPYTLD
Trigger: GTCAAGTGTGTAAGGGCCCAAACTCAGGTTCAGTGC...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CAA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACCAGCTGGATCTCCCCTaGTACCCCCAGATTTGGGTG +
Preference number: 3 (lower is better)
Translates to: CSPLSASKWSLIQAGQANQLDLP*YPQIWV
Trigger: CACCCAAATCTGGGGGTACAAGGGGAGATCCAGCTG...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCTGCTTGCCCCCACCTaGCTGCTGCGAGGCCCTGGT +
Preference number: 3 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVLLAPT*LLRGPG
Trigger: ACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCAG...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CAA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGCACTGAACCTGAGTTaGGGCCCTTACACACTTGAC +
Preference number: 3 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHALNLS*GPYTLD
Trigger: GTCAAGTGTGTAAGGGCCCAAACTCAGGTTCAGTGC...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CCA 72 bp GGACAGCTCAAGACTGTGTCCCTTCACCCCATCTCCTaGCTTGCTATGCTCCTACAGTGTCACTGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: GQLKTVSLHPIS*LAMLLQCHCPA
Trigger: GGCAGGGCAGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCTTGAGCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CAA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATTGGACAAAGGCTGTCTaGGCAAGATGTGGGAATGAG +
Preference number: 3 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHWTKAV*ARCGNE
Trigger: CTCATTCCCACATCTTGCCAAGACAGCCTTTGTCCA...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR TCA 72 bp CCCTGCCCCAGGAGGTTGAGGCTAGCAGACACCCCCTaGCGATTCACAGCTGATTTAATGCTACGTGAGTCC +
Preference number: 3 (lower is better)
Translates to: PCPRRLRLADTP*RFTADLMLRES
Trigger: GGACTCACGTAGCATTAAATCAGCTGTGAATCGTCAGGGGGTGTCTGCTAGCCTCAACCTCCTGGGGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR TCA 72 bp TCTCACTGTCATCCGACAGGGAGAGGCTGTCGATGCTaGGGCACGAGAGAATTTGCTCCTGCTCCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: SHCHPTGRGCRC*GTREFAPAPPE
Trigger: CTCTGGAGGAGCAGGAGCAAATTCTCTCGTGCCTCAGCATCGACAGCCTCTCCCTGTCGGATGACAGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR TCA 72 bp GAGTGTACGCCTGAGCTCAGGGTGTCCCGCGAGCTTTaGGAGGCCTTTGATGGGTTCTTCTCACTGTCATCC +
Preference number: 3 (lower is better)
Translates to: ECTPELRVSREL*EAFDGFFSLSS
Trigger: GGATGACAGTGAGAAGAACCCATCAAAGGCCTCTCAAAGCTCGCGGGACACCCTGAGCTCAGGCGTACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 72 bp AGGGAGAGGCTGTCGATGCTGAGGCACGAGAGAATTTaGTCCTGCTCCTCCAGAGAAAATGGCTGGGACAGG +
Preference number: 3 (lower is better)
Translates to: RERLSMLRHERI*SCSSRENGWDR
Trigger: CCTGTCCCAGCCATTTTCTCTGGAGGAGCAGGAGCAAATTCTCTCGTGCCTCAGCATCGACAGCCTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 72 bp TGGCAATCTGCCATGAACTTGGTGAGCCTCCGCAGCTaGATCTCCCCTTGTACCCCCAGATTTGGGTGGCAA +
Preference number: 3 (lower is better)
Translates to: WQSAMNLVSLRS*ISPCTPRFGWQ
Trigger: TTGCCACCCAAATCTGGGGGTACAAGGGGAGATCCAGCTGCGGAGGCTCACCAAGTTCATGGCAGATTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp GTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACCTCCATGTCGTAGCGAACAGGGTAATTGGCTTGATTaGGCGGTGGATGTCTTGGTT +
Preference number: 3 (lower is better)
Translates to: VCTAGRCPSLAPPCRSEQGNWLD*AVDVLV
Trigger: AACCAAGACATCCACCGCCAAATCAAGCCAATTACC...CTGTTCGCTACGACATGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 72 bp AGGCTGTCGATGCTGAGGCACGAGAGAATTTGCTCCTaGTCCTCCAGAGAAAATGGCTGGGACAGGCTGTTG +
Preference number: 3 (lower is better)
Translates to: RLSMLRHERICS*SSRENGWDRLL
Trigger: CAACAGCCTGTCCCAGCCATTTTCTCTGGAGGAGCAGGAGCAAATTCTCTCGTGCCTCAGCATCGACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 72 bp CTGATGCCAGTGGCGATGTCTCCCACTTTGACCCGGTaGAACTCCCGGATGTGCAGGTGTTCACCATTAAGA +
Preference number: 3 (lower is better)
Translates to: LMPVAMSPTLTR*NSRMCRCSPLR
Trigger: TCTTAATGGTGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCCACTGGCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTTCACCCCAAACTTTATaGCTTACAAAGAGTTCTCTA +
Preference number: 3 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSSPQTL*LTKSSL
Trigger: TAGAGAACTCTTTGTAAGCAATAAAGTTTGGGGTGA...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CAA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCCAATCTGCCATGAACTaGGTGAGCCTCCGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: YPASPFTFTDEGTECQRVQSAMN*VSLRSW
Trigger: CCAGCTGCGGAGGCTCACCAAGTTCATGGCAGATTG...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCAGCTTTGAGAGGCCTTaGATGGGTTCTTCTCACTGT +
Preference number: 3 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLSFERP*MGSSHC
Trigger: ACAGTGAGAAGAACCCATCAAAGGCCTCTCAAAGCT...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR GCA 72 bp GCAGAGAAGATCCTGTTTGTTTCCCGAGGTAACTCCTaGCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGT +
Preference number: 3 (lower is better)
Translates to: AEKILFVSRGNS*HPPLSLHVAEC
Trigger: ACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGGAAACAAACAGGATCTTCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CAA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCAGCCATGAAAGTGCTTaGAGGTCATCAGAGTGCAAA +
Preference number: 3 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLSHESA*RSSECK
Trigger: TTTGCACTCTGATGACCTCAAAGCACTTTCATGGCT...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CCA 72 bp TCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTaGCAAGATGTGGGAATGAGCTTCTCCCACGGAGTC +
Preference number: 3 (lower is better)
Translates to: SDSMWTAGQRLS*QDVGMSFSHGV
Trigger: GACTCCGTGGGAGAAGCTCATTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CCA 72 bp GCTCTCTCGGCTGGGCATGGAGGGTCTGGTGGTAATTaGCTTGATTTGGCGGTGGATGTCTTGGTTCTTTAT +
Preference number: 3 (lower is better)
Translates to: ALSAGHGGSGGN*LDLAVDVLVLY
Trigger: ATAAAGAACCAAGACATCCACCGCCAAATCAAGCCAATTACCACCAGACCCTCCATGCCCAGCCGAGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp GCCTTTGATGGGTTCTTCTCACTGTCATCCGACAGGGAGAGGCTGTCGATGCTGTTGGCGGTGGATGTCTaGGTTCTTTATATTCTCCCC +
Preference number: 3 (lower is better)
Translates to: AFDGFFSLSSDRERLSMLLAVDV*VLYILP
Trigger: GGGGAGAATATAAAGAACCAAGACATCCACCGCCAA...CAGCATCGACAGCCTCTCCCTGTCGGATGACAGTGAGAAGAACCCATCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTGAGGCACGAGAGAATTaGCTCCTGCTCCTCCAGAGA +
Preference number: 3 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVEAREN*LLLLQR
Trigger: TCTCTGGAGGAGCAGGAGCAAATTCTCTCGTGCCTC...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR TCA 72 bp ACCAGAGGTCAACTCAGGACCTGTGTTGCAACAACCTaGAAAGTGTGGTGTATTCTACCAGGGAGCCTTCCC +
Preference number: 3 (lower is better)
Translates to: TRGQLRTCVATT*KVWCILPGSLP
Trigger: GGGAAGGCTCCCTGGTAGAATACACCACACTTTTCAGGTTGTTGCAACACAGGTCCTGAGTTGACCTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CCA 72 bp TGGGGACTGAGAACCACTTCACTTACACACCTTCTTTaGTCCTTGGCTGAACCAGAGGTCAACTCAGGACCT +
Preference number: 3 (lower is better)
Translates to: WGLRTTSLTHLL*SLAEPEVNSGP
Trigger: AGGTCCTGAGTTGACCTCTGGTTCAGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CAA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTAGCCATGAAAGTGCTTaGAGGTCATCAGAGTGCAAA +
Preference number: 3 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTSHESA*RSSECK
Trigger: TTTGCACTCTGATGACCTCAAAGCACTTTCATGGCT...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR GCA 72 bp ATGTCTCCCACTTTGACCCGGTGGAACTCCCGGATGTaGAGGTGTTCACCATTAAGAGACTGTATTTGGACT +
Preference number: 3 (lower is better)
Translates to: MSPTLTRWNSRM*RCSPLRDCIWT
Trigger: AGTCCAAATACAGTCTCTTAATGGTGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGGAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR CCA 72 bp ATGGAGGGTCTGGTGGTAATTGGCTTGATTTGGCGGTaGATGTCTTGGTTCTTTATATTCTCCCCTCCAAGG +
Preference number: 3 (lower is better)
Translates to: MEGLVVIGLIWR*MSWFFIFSPPR
Trigger: CCTTGGAGGGGAGAATATAAAGAACCAAGACATCCACCGCCAAATCAAGCCAATTACCACCAGACCCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
3UTR-3UTR CAA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGTGGGCCCTTACACACTaGACACTCTCACAGCAGCCT +
Preference number: 3 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKWALTH*TLSQQP
Trigger: AGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCA...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR GCA 72 bp TTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTaGAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: LLLTKSSLQPRL*STKAAVLYVLG
Trigger: CCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR-3UTR CAA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATAAATCTGGAAGAGGTTaGAGGAGTCACATGCATGTG +
Preference number: 3 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHKSGRG*RSHMHV
Trigger: CACATGCATGTGACTCCTCAAACCTCTTCCAGATTT...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGAGCTTGGGGTGTCGGTaGGCCGCCCCCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPASLGCR*AAPGPA
Trigger: TGCTGGCCCGGGGGCGGCCCACCGACACCCCAAGCT...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTTGGGCCCCAGGGCCCTaGAGCTCCCCCTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PSRKAASGSVEPAVEGRVWAPGP*SSPCWP
Trigger: TGGCCAACAGGGGGAGCTGCAGGGCCCTGGGGCCCA...AACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGCCCAGGCGGAGCTGGTaGGTGGCCCAGTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: CEALVPLLSRGLADPWERPRRSW*VAQWTS
Trigger: AGAAGTCCACTGGGCCACGCACCAGCTCCGCCTGGG...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCCAGCTGTGGCGTCGCAGCTCCTaGCCAGCACCACCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: PAVWSRRWRAGLGPVLQLWRRSS*PAPPPE
Trigger: CTCCGGAGGTGGTGCTGGGCAGGAGCTGCGACGCCA...CAGCTGGAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGGAGCCTCGGCCTGGCTaGTCCAGGAGTGTACGCCTG +
Preference number: 4 (lower is better)
Translates to: CEALVPLLSRGLADPWEREPRPG*SRSVRL
Trigger: CAGGCGTACACTCCTGGAGCAGCCAGGCCGAGGCTC...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGCCAGGAGTGTACGCCTaGGCTCAGGGTGTCCCGCGA +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPAPGVYA*AQGVPR
Trigger: TCGCGGGACACCCTGAGCTCAGGCGTACACTCCTGG...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGTCTGGGAGACAGCCCTaGTCCTTGACCAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CEALVPLLSRGLADPWERSGRQP*SLTSWP
Trigger: GGGCCAGCTGGTCAAGGAGCAGGGCTGTCTCCCAGA...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGAGGTCTTGGCCAGGCTaGTCAGGCTGTGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPARSWPG*SGCGPG
Trigger: GCCAGGCCCACAGCCTGACCAGCCTGGCCAAGACCT...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp GGGGTGTCGGTGGGCCGCCCCCGGGCCAGCACCATGTTCCAGCTGGAGCTTCGAGTTTCTGGCAGGGGCTaGCTCCAGGGAGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: GVSVGRPRASTMFQLELRVSGRG*LQGGQR
Trigger: CCTCTGTCCTCCCTGGAGCCAGCCCCTGCCAGAAAC...TCGAAGCTCCAGCTGGAACATGGTGCTGGCCCGGGGGCGGCCCACCGACACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAGCTGCAGCTGGGATCTaGCTGCTGATGCCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGAAAGI*LLMPVA
Trigger: CGCCACTGGCATCAGCAGCCAGATCCCAGCTGCAGC...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCCCCCGGGCCAGCACCATGTTCCAGCTGGAGCTTCGAGCCTCGGCCTGGCTGCTGCAGCTCCCCCTGTTaGCCATGCTGGGTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: APGPAPCSSWSFEPRPGCCSSPC*PCWVPS
Trigger: TGACGGCACCCAGCATGGCCAACAGGGGGAGCTGCA...GCAGCCAGGCCGAGGCTCGAAGCTCCAGCTGGAACATGGTGCTGGCCCGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGACAGTTTGTGGAGTTCTaGTCGAGGCAGAGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGQFVEF*SRQSRP
Trigger: CGGCCGGCTCTGCCTCGATCAGAACTCCACAAACTG...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGACCGTCCTGGGGGTGGTaGAGTTTCCACACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGPSWGW*SFHTWF
Trigger: GAACCACGTGTGGAAACTGCACCACCCCCAGGACGG...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGATCCTGGGAGGCATTCTaGTTGCCCCCACCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGSWEAF*LPPPCC
Trigger: GCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCAGGA...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGAGTCTCGGCGTCCCCTaGCCCAGGAGGTTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPASLGVP*PRRLRL
Trigger: TAGCCTCAACCTCCTGGGGCAGGGGACGCCGAGACT...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGGCGGAGCTGGTGCGTaGCCCAGTGGACTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPAGGAGA*PSGLLL
Trigger: GAGAAGAAGTCCACTGGGCCACGCACCAGCTCCGCC...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTGCCCAGGCGGAGCTaGTGCGTGGCCCAGTGGACT +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLLPRRS*CVAQWT
Trigger: AGTCCACTGGGCCACGCACCAGCTCCGCCTGGGCAG...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGTTTCTGGCAGGGGCTaGCTCCAGGGAGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPAVSGRG*LQGGQR
Trigger: CCTCTGTCCTCCCTGGAGCCAGCCCCTGCCAGAAAC...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCAGCTTGGGGTGTCGGTaGGCCGCCCCCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPSLGCR*AAPGPA
Trigger: TGCTGGCCCGGGGGCGGCCCACCGACACCCCAAGCT...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCCCCCGGGCCAGCACCATGTTCCAGCTGGAGCTTCGAGCCTCGGCCTGGCTGCGTCGATGCCCGAGTCTaGCACCTCCATGTCGTAGCG +
Preference number: 4 (lower is better)
Translates to: APGPAPCSSWSFEPRPGCVDARV*HLHVVA
Trigger: CGCTACGACATGGAGGTGCCAGACTCGGGCATCGAC...GCAGCCAGGCCGAGGCTCGAAGCTCCAGCTGGAACATGGTGCTGGCCCGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTGCTTCCGGCAGTGTaGAGCCGGCGGTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLLLPAV*SRRWRA
Trigger: TGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTCTGCTGCCCCACTGCTaGGCCAGGGGCACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPLLPHC*ARGTWA
Trigger: TGCCCAGGTGCCCCTGGCTCAGCAGTGGGGCAGCAG...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGCCCAGGCCATCAGGTTaGAGACACACAGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: CEALVPLLSRGLADPWERPRPSG*RHTAWP
Trigger: TGGCCATGCTGTGTGTCTTCAACCTGATGGCCTGGG...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGAGGGGTGGCAGCCGTTaGGCATGTGCAGCATCATAC +
Preference number: 4 (lower is better)
Translates to: CEALVPLLSRGLADPWERRGGSR*ACAASY
Trigger: GTATGATGCTGCACATGCTCAACGGCTGCCACCCCT...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCGGCCCTCGGAAGAACTaGGTCCAGGGGTGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGGPRKN*VQGWQP
Trigger: CGGCTGCCACCCCTGGACTCAGTTCTTCCGAGGGCC...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCCAGGAGTGTACGCCTaGGCTCAGGGTGTCCCGCGA +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLPGVYA*AQGVPR
Trigger: TCGCGGGACACCCTGAGCTCAGGCGTACACTCCTGG...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCCAGCTGGCCATGCTTaGCCCTCCAGCTCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLPAGHA*PSSSRR
Trigger: TCGCCTGGAGCTGGAGGGTCAAGCATGGCCAGCTGG...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAGGGCCCTTACACACTTaGCACTCTCACAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGGPLHT*HSHSSL
Trigger: CAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCC...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCTGGCGTCGCAGCTCCTaGCCAGCACCACCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGWRRSS*PAPPPE
Trigger: CTCCGGAGGTGGTGCTGGGCAGGAGCTGCGACGCCA...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGGAGCCTCGGCCTGGCTaGTCCAGGAGTGTACGCCTG +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLEPRPG*SRSVRL
Trigger: CAGGCGTACACTCCTGGAGCAGCCAGGCCGAGGCTC...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGTGCACTGCAGGTCGATaGCCGAGTCTGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPACTAGR*PSLAPP
Trigger: TGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCA...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCACCGAGCAGGAAGGCTaGTTCCGGCAGTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LLPAVWSRRWRAGLGPVLTEQEG*FRQCGA
Trigger: GGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGT...GAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp CCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTTTCAGGGCAGCATCGTaGACCGAGCAGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSRKAASGSVEPAVEGRVFRAAS*TEQEGC
Trigger: GCAGCCTTCCTGCTCGGTGCACGATGCTGCCCTGAA...AACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp CTTGACCCTCCAGCTCCAGGCGAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCACTGCCCTGCCCTaGCCTGCCAGAGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LDPPAPGEAAIRGQCALQVTALP*PARGQP
Trigger: TGGCTGCCCTCTGGCAGGGCAGGGCAGGGCAGTGAC...CTGCAGTGCACACTGGCCCCTGATGGCAGCTTCGCCTGGAGCTGGAGGGTCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCAGGGCCCGGTCCTCTaGGAGACAGCCCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSQGPVL*ETALLL
Trigger: AAGGAGCAGGGCTGTCTCCCAGAGGACCGGGCCCTG...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATAGCTTGGGGTGTCGGTaGGCCGCCCCCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHSLGCR*AAPGPA
Trigger: TGCTGGCCCGGGGGCGGCCCACCGACACCCCAAGCT...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGACTGCTGCCCCACTGCTaGGCCAGGGGCACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRLLPHC*ARGTWA
Trigger: TGCCCAGGTGCCCCTGGCTCAGCAGTGGGGCAGCAG...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGCCCAGGCCATCAGGTTaGAGACACACAGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPAPRPSG*RHTAWP
Trigger: TGGCCATGCTGTGTGTCTTCAACCTGATGGCCTGGG...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTGTGTCCCGCGAGCTTTaGGAGGCCTTTGATGGGTTC +
Preference number: 4 (lower is better)
Translates to: PSRKAASGSVEPAVEGRVVSREL*EAFDGF
Trigger: GAACCCATCAAAGGCCTCTCAAAGCTCGCGGGACAC...AACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGGCAGGGCTCAGGTGTaGAATCCTGGGAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPAGRAQV*NPGRHS
Trigger: AGAATGCCTCCCAGGATTTCACACCTGAGCCCTGCC...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGAGGGATGAGGCAGTCTaGTATAGGGGAAGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPARDEAV*YRGRGA
Trigger: CGCACCCCTTCCCCTATAGCAGACTGCCTCATCCCT...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGGGATCTGGAGCCCCTTaGTGCCCAGGTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLGSGAP*CPGLGQ
Trigger: CTGGCCAAGACCTGGGCAGCAAGGGGCTCCAGATCC...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCCTCCGAAGGAGCCTCTaGCCAGGCGGAGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALILRRSL*PGGAGA
Trigger: CGCACCAGCTCCGCCTGGGCAGAGGCTCCTTCGGAG...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CAGGAGGGTGGGATCTCCCTCACAGGCGGAGGCTCGCTGGCAATCTGCCATGAACTCCGAAGGAGCCTCTaGCCAGGCGGAGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: QEGGISLTGGGSLAICHELRRSL*PGGAGA
Trigger: CGCACCAGCTCCGCCTGGGCAGAGGCTCCTTCGGAG...TTCATGGCAGATTGCCAGCGAGCCTCCGCCTGTGAGGGAGATCCCACCCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTGGCGTCGCAGCTCCTaGCCAGCACCACCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPWRRSS*PAPPPE
Trigger: CTCCGGAGGTGGTGCTGGGCAGGAGCTGCGACGCCA...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGCTGCAGTTCTTTATGTaGTGGGGGCCGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPALQFFM*WGPGLS
Trigger: AGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAG...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTTCCCCTTGCTCCATCTaGCACCGCAGAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSSPCSI*HRRAAP
Trigger: AGGGGCTGCTCTGCGGTGGCAGATGGAGCAAGGGGA...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGATATGGGGCGCCGAGTaGAGACTCATCCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPAIWGAE*RLILLH
Trigger: GTGCAGGAGGATGAGTCTCCACTCGGCGCCCCATAT...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTGCTGGGCTCCAGGTGTaGGCCAGGCAGGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPAGLQV*ARQGLW
Trigger: CCAAAGCCCCTGCCTGGCCCACACCTGGAGCCCAGC...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTGGGCTCCCGGGATCTaGAGCCCCTTGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPWAPGI*SPLLPR
Trigger: CCTGGGCAGCAAGGGGCTCCAGATCCCGGGAGCCCA...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGCTGCCCAGGCGGAGCTaGTGCGTGGCCCAGTGGACT +
Preference number: 4 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLLPRRS*CVAQWT
Trigger: AGTCCACTGGGCCACGCACCAGCTCCGCCTGGGCAG...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGTCACAGAGGGCTGCGTaGCTCCCATCGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLSQRAA*LPSLDR
Trigger: CCTGTCCAGCGATGGGAGCCACGCAGCCCTCTGTGA...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CAGGAGGGTGGGATCTCCCTCACAGGCGGAGGCTCGCTGGCAATCTGCCATGAAAGGGGCGCAGGAGGGTaGGATCTCCCTCACAGGCGG +
Preference number: 4 (lower is better)
Translates to: QEGGISLTGGGSLAICHERGAGG*DLPHRR
Trigger: CCGCCTGTGAGGGAGATCCCACCCTCCTGCGCCCCT...TTCATGGCAGATTGCCAGCGAGCCTCCGCCTGTGAGGGAGATCCCACCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCCCCTCTTGGATGGCCTaGGCTGTGAGAGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGPSWMA*AVRGAQ
Trigger: CTGCGCCCCTCTCACAGCCCAGGCCATCCAAGAGGG...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTTCCGCTCTGGTGAGCTaGGGTTTCTGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSSALVS*GFWQGL
Trigger: CAGCCCCTGCCAGAAACCCCAGCTCACCAGAGCGGA...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTGTGTGGAGCCGGCGGTaGAGGGCAGGGTTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPVWSRR*RAGLGP
Trigger: AGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACAC...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGAGGGACAATTCTGGGTaGGGTCAATCCTGCACATGC +
Preference number: 4 (lower is better)
Translates to: CEALVPLLSRGLADPWERRDNSG*GQSCTC
Trigger: GCATGTGCAGGATTGACCTCACCCAGAATTGTCCCT...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCAGGGGTGGCAGCCGTTaGGCATGTGCAGCATCATAC +
Preference number: 4 (lower is better)
Translates to: LLPAVWSRRWRAGLGPVLRGGSR*ACAASY
Trigger: GTATGATGCTGCACATGCTCAACGGCTGCCACCCCT...GAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCGATGTCTCCCACTTTaGCCCGGTGGAACTCCCGGA +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLRCLPL*PGGTPG
Trigger: TCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCG...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp GGCTCGCTGGCAATCTGCCATGAACTTGGTGAGCCTCCGCAGCTGGATCTCCCCCCAGCTGGCCATGCTTaGCCCTCCAGCTCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GSLAICHELGEPPQLDLPPAGHA*PSSSRR
Trigger: TCGCCTGGAGCTGGAGGGTCAAGCATGGCCAGCTGG...GGGGAGATCCAGCTGCGGAGGCTCACCAAGTTCATGGCAGATTGCCAGCGAGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCCCCAGGCGGAGCTGGTaGGTGGCCCAGTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPPRRSW*VAQWTS
Trigger: AGAAGTCCACTGGGCCACGCACCAGCTCCGCCTGGG...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCCCCTCCCAGCTCCGCTaGAGACACGCGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPPSQLR*RHAVDG
Trigger: CCCATCCACCGCGTGTCTGCAGCGGAGCTGGGAGGG...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TTGGACTTTCACACCATTGAAATAGCTTGGGGTGTCGGTGGGCCGCCCCCGGGCCCCTCCCAGCTCCGCTaGAGACACGCGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: LDFHTIEIAWGVGGPPPGPSQLR*RHAVDG
Trigger: CCCATCCACCGCGTGTCTGCAGCGGAGCTGGGAGGG...GCCCGGGGGCGGCCCACCGACACCCCAAGCTATTTCAATGGTGTGAAAGTCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCGAGCCTCGGCCTGGCTaGTCCAGGAGTGTACGCCTG +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPEPRPG*SRSVRL
Trigger: CAGGCGTACACTCCTGGAGCAGCCAGGCCGAGGCTC...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCTGCTTGCCCCCACCTTaGTGCTGCGAGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALICLPPP*CCEALV
Trigger: GACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCA...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CAGGAGGGTGGGATCTCCCTCACAGGCGGAGGCTCGCTGGCAATCTGCCATGAATCCCCCTGTTGGCCATaGTGGGTGCCGTCACCGACC +
Preference number: 4 (lower is better)
Translates to: QEGGISLTGGGSLAICHESPCWP*WVPSPT
Trigger: GGTCGGTGACGGCACCCAGCATGGCCAACAGGGGGA...TTCATGGCAGATTGCCAGCGAGCCTCCGCCTGTGAGGGAGATCCCACCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp GAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACGACCAGGCCTCCCCTTaGTCCATCTGCCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: EAAIRGQCALQVDARVWHDQASP*SICHRR
Trigger: TCTGCGGTGGCAGATGGAGCAAGGGGAGGCCTGGTC...GTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGATCTTCTCCTTGGCTTTaGGGAGTTCCTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGSSPWL*GVPSAA
Trigger: GGCAGCAGAAGGAACTCCCCAAAGCCAAGGAGAAGA...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGCACGAGACAGGCAGCTaGGCTCCAGGTGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLHETGS*APGVGQ
Trigger: CTGGCCCACACCTGGAGCCCAGCTGCCTGTCTCGTG...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCAGGTCTTGGCCAGGCTaGTCAGGCTGTGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALIRSWPG*SGCGPG
Trigger: GCCAGGCCCACAGCCTGACCAGCCTGGCCAAGACCT...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGATGGGCTCCCGGGATCTaGAGCCCCTTGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRWAPGI*SPLLPR
Trigger: CCTGGGCAGCAAGGGGCTCCAGATCCCGGGAGCCCA...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATTGTTGTCTCCTCAGCTaGCCGGGGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHCCLLS*PGPWGP
Trigger: AGGGCCCCAGGGCCCCGGCCAGCTGAGGAGACAACA...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGGTGAGCTGGGGTTTCTaGCAGGGGCTGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLVSWGF*QGLAPG
Trigger: CCCTGGAGCCAGCCCCTGCCAGAAACCCCAGCTCAC...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCGTGAGCTGGGGTTTCTaGCAGGGGCTGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALIVSWGF*QGLAPG
Trigger: CCCTGGAGCCAGCCCCTGCCAGAAACCCCAGCTCAC...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACCTTCGAGCCTCGGCCTaGCTGCTCCAGGAGTGTACG +
Preference number: 4 (lower is better)
Translates to: EAAIRGQCALQVDARVWHLRASA*LLQECT
Trigger: CGTACACTCCTGGAGCAGCCAGGCCGAGGCTCGAAG...GTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCCTGCTTCCGGCAGTGTaGAGCCGGCGGTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPLLPAV*SRRWRA
Trigger: TGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGATCAGGTGTGAAATCCTaGGAGGCATTCTGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGSGVKS*EAFCLP
Trigger: GGGCAAGCAGAATGCCTCCCAGGATTTCACACCTGA...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTACTCTCACAGCAGCCTaGAGGGTGAGGGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPTLTAA*RVRGRG
Trigger: CCCTCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGT...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAGCATACCTGCTGACCTaGTTCTGCACTGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGAYLLT*FCTEPE
Trigger: CTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGC...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCCGGGGCCTGCTGCTCTaGGGAAGAGTGGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALIRGLLL*GRVVAS
Trigger: GCTGGCTACCACTCTTCCCCAGAGCAGCAGGCCCCG...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGCTAAGCTGGGGCAATaGGGAAGGGGGTGCTATTCT +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPAAKLGQ*GRGCYS
Trigger: AGAATAGCACCCCCTTCCCCATTGCCCCAGCTTAGC...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTGCTAAGCTGGGGCAATaGGGAAGGGGGTGCTATTCT +
Preference number: 4 (lower is better)
Translates to: PSRKAASGSVEPAVEGRVAKLGQ*GRGCYS
Trigger: AGAATAGCACCCCCTTCCCCATTGCCCCAGCTTAGC...AACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCAGTTCTTTATGTGCTaGGGGCCGGGGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSQFFMC*GPGLSP
Trigger: GGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTG...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CAA 72 bp TGTGAAATCCTGGGAGGCATTCTGCTTGCCCCCACCTaGCTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: CEILGGILLAPT*LLRGPGPTAEP
Trigger: CGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCAGGATTTCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGAAGGCCACTCCTGCATaGGCCAGGGACTTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLKATPA*ARDFEL
Trigger: GAGCTCAAAGTCCCTGGCTCATGCAGGAGTGGCCTT...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp CCATGCTTGACCCTCCAGCTCCAGGCGAAGCTGCCATCAGGGGCCAGTGTGCACCCAGCCGCACCTTTTTaGCAGCGCACTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PCLTLQLQAKLPSGASVHPAAPF*QRTGSQ
Trigger: CTGGCTTCCAGTGCGCTGTCAAAAAGGTGCGGCTGG...GTGCACACTGGCCCCTGATGGCAGCTTCGCCTGGAGCTGGAGGGTCAAGCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp CCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCCAGCTGAGGGACAATTCTGGGTaGGGTCAATCCTGCACATGC +
Preference number: 4 (lower is better)
Translates to: PAVWSRRWRAGLGPVLQLRDNSG*GQSCTC
Trigger: GCATGTGCAGGATTGACCTCACCCAGAATTGTCCCT...CAGCTGGAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGGTGTCCCGCGAGCTTTaGGAGGCCTTTGATGGGTTC +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLVSREL*EAFDGF
Trigger: GAACCCATCAAAGGCCTCTCAAAGCTCGCGGGACAC...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGGGCAGGGCTCAGGTGTaGAATCCTGGGAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLGRAQV*NPGRHS
Trigger: AGAATGCCTCCCAGGATTTCACACCTGAGCCCTGCC...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCCAGCAAATGGTCACTaGTCCAAGCGGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSPANGH*SKRVRP
Trigger: TGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGG...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp GAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACGGCGGGCATACCTGCTaGCCTGGTTCTGCACTGAAC +
Preference number: 4 (lower is better)
Translates to: EAAIRGQCALQVDARVWHGGHTC*PGSALN
Trigger: GTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCC...GTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCGGTGAGCTGGCCAGGTaGGGCCAGGCAAGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALIGELAR*GQARGL
Trigger: TAAACCCCTTGCCTGGCCTCACCTGGCCAGCTCACC...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGACACATGTCTGGGGACTaGGAACCACTTCACTTACAC +
Preference number: 4 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGHMSGD*EPLHLH
Trigger: GTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATGTG...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCTCCCCGGGAGCAGTCTaGCTCAATGTGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGSPGAV*LNVDSW
Trigger: CCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGA...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CCTGGCTGCTCCAGGAGTGTACGCCTGAGCTCAGGGTGTCCCGCGAGCTTTGAGTGCACTGCAGGTCGATaGCCGAGTCTGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PGCSRSVRLSSGCPASFECTAGR*PSLAPP
Trigger: TGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCA...CTCAAAGCTCGCGGGACACCCTGAGCTCAGGCGTACACTCCTGGAGCAGCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCACCGAGCAGGAAGGCTaGTTCCGGCAGTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALITEQEG*FRQCGA
Trigger: GGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGT...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCTGCCCTGCCCTGCCCTaGCAGAGGGCAGCCATGAAA +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPCPALP*QRAAMK
Trigger: TTTCATGGCTGCCCTCTGGCAGGGCAGGGCAGGGCA...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCGTCACTGCCCTGCCCTaGCCTGCCAGAGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKIVTALP*PARGQP
Trigger: TGGCTGCCCTCTGGCAGGGCAGGGCAGGGCAGTGAC...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATACAGTGTCACTGCCCTaGCCTGCCCTGCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHTVSLP*PALPEG
Trigger: GCCCTCTGGCAGGGCAGGGCAGGGCAGTGACACTGT...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CTGGCTGCTGATGCCAGTGGCGATGTCTCCCACTTTGACCCGGTGGAACTCCCGAGTCTCGGCGTCCCCTaGCCCAGGAGGTTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: LAADASGDVSHFDPVELPSLGVP*PRRLRL
Trigger: TAGCCTCAACCTCCTGGGGCAGGGGACGCCGAGACT...CGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCCACTGGCATCAGCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCAGTTCTTTATGTaGTGGGGGCCGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSLQFFM*WGPGLS
Trigger: AGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAG...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCGGCGGAGCTGGTGCGTaGCCCAGTGGACTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALIGGAGA*PSGLLL
Trigger: GAGAAGAAGTCCACTGGGCCACGCACCAGCTCCGCC...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTTGACCCTCCAGCTCCAGGCGAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGCGTGGCTCCCATCGCTaGACAGGAGCACGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: LDPPAPGEAAIRGQCALQRGSHR*TGARCQ
Trigger: CTGACAACGTGCTCCTGTCCAGCGATGGGAGCCACG...CTGCAGTGCACACTGGCCCCTGATGGCAGCTTCGCCTGGAGCTGGAGGGTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCAGGGGCGCAGGAGGGTaGGATCTCCCTCACAGGCGG +
Preference number: 4 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKIRGAGG*DLPHRR
Trigger: CCGCCTGTGAGGGAGATCCCACCCTCCTGCGCCCCT...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATCCCTCTTGGATGGCCTaGGCTGTGAGAGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHPSWMA*AVRGAQ
Trigger: CTGCGCCCCTCTCACAGCCCAGGCCATCCAAGAGGG...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACGGGCCCTGGGGCCCTTaGCGAAAGCTCTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: CSPLSASKWSLIQAGQANGPWGP*RKLSRL
Trigger: CAGCCGAGAGAGCTTTCGCCAAGGGCCCCAGGGCCC...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTGTTGTCTCCTCAGCTaGCCGGGGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CSPLSASKWSLIQAGQANCCLLS*PGPWGP
Trigger: AGGGCCCCAGGGCCCCGGCCAGCTGAGGAGACAACA...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCTGTTGTCTCCTCAGCTaGCCGGGGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKICCLLS*PGPWGP
Trigger: AGGGCCCCAGGGCCCCGGCCAGCTGAGGAGACAACA...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCGGGAGGAGACTTGTTTaGCTCTGGGGGCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGGRRLV*LWGLWW
Trigger: CCACCAGAGCCCCCAGAGCCAAACAAGTCTCCTCCC...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCGTTTCTGGCAGGGGCTaGCTCCAGGGAGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPVSGRG*LQGGQR
Trigger: CCTCTGTCCTCCCTGGAGCCAGCCCCTGCCAGAAAC...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCAGACACGCGGTGGATGGGCTCTTTCCTCAGCCCCTCTTGGATGGCCTGGGCTGCACCATGTTCCAGCTaGAGCTTCGAGCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: ADTRWMGSFLSPSWMAWAAPCSS*SFEPRP
Trigger: AGGCCGAGGCTCGAAGCTCCAGCTGGAACATGGTGC...AGCCCAGGCCATCCAAGAGGGGCTGAGGAAAGAGCCCATCCACCGCGTGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp CCATGCTTGACCCTCCAGCTCCAGGCGAAGCTGCCATCAGGGGCCAGTGTGCACCCCACTTTGACCCGGTaGAACTCCCGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PCLTLQLQAKLPSGASVHPTLTR*NSRMCR
Trigger: CCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGG...GTGCACACTGGCCCCTGATGGCAGCTTCGCCTGGAGCTGGAGGGTCAAGCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCGTCGATGCCCGAGTCTaGCACCTCCATGTCGTAGCG +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGVDARV*HLHVVA
Trigger: CGCTACGACATGGAGGTGCCAGACTCGGGCATCGAC...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAAAAGGGGCACATGTCTaGGGACTGAGAACCACTTCA +
Preference number: 4 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGKGAHV*GLRTTS
Trigger: TGAAGTGGTTCTCAGTCCCCAGACATGTGCCCCTTT...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCAGACACGCGGTGGATGGGCTCTTTCCTCAGCCCCTCTTGGATGGCCTGGGCTGGGGAACCAGCACGCTaGACACTGATAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ADTRWMGSFLSPSWMAWAGEPAR*TLIVGL
Trigger: CAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCCCC...AGCCCAGGCCATCCAAGAGGGGCTGAGGAAAGAGCCCATCCACCGCGTGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp CCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCCAGCTGATGCAGAATCCTTCGTaGGTGGAGGTATTCCAGACC +
Preference number: 4 (lower is better)
Translates to: PAVWSRRWRAGLGPVLQLMQNPS*VEVFQT
Trigger: GGTCTGGAATACCTCCACTCACGAAGGATTCTGCAT...CAGCTGGAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTGGCCCTCGGAAGAACTaGGTCCAGGGGTGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PFTFTDEGTECQRVWGSAGPRKN*VQGWQP
Trigger: CGGCTGCCACCCCTGGACTCAGTTCTTCCGAGGGCC...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CAGGAGGGTGGGATCTCCCTCACAGGCGGAGGCTCGCTGGCAATCTGCCATGAAATCCCTGGGAACGGCTaGGCCTGTGTTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QEGGISLTGGGSLAICHEIPGNG*ACVSGQ
Trigger: CTGCCCTGAAACACAGGCTCAGCCGTTCCCAGGGAT...TTCATGGCAGATTGCCAGCGAGCCTCCGCCTGTGAGGGAGATCCCACCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp CTTGACCCTCCAGCTCCAGGCGAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGCCAGCAAATGGTCACTaGTCCAAGCGGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LDPPAPGEAAIRGQCALQPANGH*SKRVRP
Trigger: TGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGG...CTGCAGTGCACACTGGCCCCTGATGGCAGCTTCGCCTGGAGCTGGAGGGTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGATGCTACGTGAGTCCTaGGTAGCTCCCCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLMLRES*VAPLGE
Trigger: TTCTCCCAGGGGAGCTACTCAGGACTCACGTAGCAT...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTGTTTCTTCCGGGCTTTaGTGCGACGCTTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSVSSGL*CDAFPS
Trigger: GGAAGGGAAAGCGTCGCAGCAAAGCCCGGAAGAAAC...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTACACAGGCCAGTTTaGTCAGGTGTGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSLHRPV*SGVGQA
Trigger: TGCCTGACCCACACCTGAGCAAACTGGCCTGTGTAG...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGAGGATCTGGAGCCCCTTaGTGCCCAGGTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRGSGAP*CPGLGQ
Trigger: CTGGCCAAGACCTGGGCAGCAAGGGGCTCCAGATCC...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp GAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACAAAGTCACAGAGGGCTaGGTGGCTCCCATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: EAAIRGQCALQVDARVWHKVTEG*VAPIAG
Trigger: TCCAGCGATGGGAGCCACGCAGCCCTCTGTGACTTT...GTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTCCCTCCCAGCTCCGCTaGAGACACGCGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSPSQLR*RHAVDG
Trigger: CCCATCCACCGCGTGTCTGCAGCGGAGCTGGGAGGG...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCTGCTTGCCCCCACCTTaGTGCTGCGAGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLCLPPP*CCEALV
Trigger: GACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCA...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTCCTGGGAGGCATTCTaGTTGCCCCCACCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPSWEAF*LPPPCC
Trigger: GCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCAGGA...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCTCCCGAGGTAACTCCTaGCATCCTCCTCTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LLPAVWSRRWRAGLGPVLSRGNS*HPPLSL
Trigger: AAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGGA...GAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp GAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACTGTGATGCTGAGCTGTaGTCTGGGGAACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: EAAIRGQCALQVDARVWHCDAEL*SGEPAR
Trigger: GCGTGCTGGTTCCCCAGAGCACAGCTCAGCATCACA...GTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATTGCCCTGCCCTGCCCTaGCAGAGGGCAGCCATGAAA +
Preference number: 4 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHCPALP*QRAAMK
Trigger: TTTCATGGCTGCCCTCTGGCAGGGCAGGGCAGGGCA...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACCTCCATGTCGTAGCGAACAGTGCCCTGCCCTGCCCTaGCAGAGGGCAGCCATGAAA +
Preference number: 4 (lower is better)
Translates to: VCTAGRCPSLAPPCRSEQCPALP*QRAAMK
Trigger: TTTCATGGCTGCCCTCTGGCAGGGCAGGGCAGGGCA...CTGTTCGCTACGACATGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACACAGTGTCACTGCCCTaGCCTGCCCTGCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: CSPLSASKWSLIQAGQANTVSLP*PALPEG
Trigger: GCCCTCTGGCAGGGCAGGGCAGGGCAGTGACACTGT...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGACTCCTACAGTGTCACTaGCCTGCCCTGCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRLLQCH*PALPCQ
Trigger: CTGGCAGGGCAGGGCAGGGCAGTGACACTGTAGGAG...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GGCGATGTCTCCCACTTTGACCCGGTGGAACTCCCGGATGTGCAGGTGTTCACCCTCCTACAGTGTCACTaGCCTGCCCTGCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GDVSHFDPVELPDVQVFTLLQCH*PALPCQ
Trigger: CTGGCAGGGCAGGGCAGGGCAGTGACACTGTAGGAG...GGTGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAGTTTATGTGTGCCTCTaGCACACATACTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGVYVCL*HTYSSS
Trigger: GGAGGATGAGTATGTGTGGCAGAGGCACACATAAAC...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376926.8
CDS-3UTR CCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCGATAGAGATGGCAGCTaGCCCTGCCTCGGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPDRDGS*PCLGAF
Trigger: GAAGGCTCCGAGGCAGGGCCAGCTGCCATCTCTATC...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCTCCTGGGGAGGGGTTTaGCCAAGGCCACTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPSWGGV*PRPLLH
Trigger: ATGCAGGAGTGGCCTTGGCCAAACCCCTCCCCAGGA...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCTCCTGGGGAGGGGTTTaGCCAAGGCCACTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALISWGGV*PRPLLH
Trigger: ATGCAGGAGTGGCCTTGGCCAAACCCCTCCCCAGGA...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCCTCATCCTCCTGCACTaGGATGGTGCAGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGLILLH*DGAALL
Trigger: CAGGAGAGCTGCACCATCCCAGTGCAGGAGGATGAG...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCCCTCCGTCCTGGGGGTaGTGCAGTTTCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPPPSWG*CSFHTW
Trigger: CCACGTGTGGAAACTGCACCACCCCCAGGACGGAGG...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACCACGAGACAGGCAGCTaGGCTCCAGGTGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CSPLSASKWSLIQAGQANHETGS*APGVGQ
Trigger: CTGGCCCACACCTGGAGCCCAGCTGCCTGTCTCGTG...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGCGTTGTCCTCAGTTTTaGGGCTGGGCTCCCGGGATC +
Preference number: 4 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLRCPQF*GWAPGI
Trigger: GATCCCGGGAGCCCAGCCCCAAAACTGAGGACAACG...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTCTGCCCAGGCGGAGCTaGTGCGTGGCCCAGTGGACT +
Preference number: 4 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSLPRRS*CVAQWT
Trigger: AGTCCACTGGGCCACGCACCAGCTCCGCCTGGGCAG...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCCAGGGCCCGGTCCTCTaGGAGACAGCCCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLQGPVL*ETALLL
Trigger: AAGGAGCAGGGCTGTCTCCCAGAGGACCGGGCCCTG...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTCACAGAGGGCTGCGTaGCTCCCATCGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPSQRAA*LPSLDR
Trigger: CCTGTCCAGCGATGGGAGCCACGCAGCCCTCTGTGA...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCTCCAGACATCCACCTTaGCGTCGCAGCTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPSRHPP*RRSSCP
Trigger: TGGGCAGGAGCTGCGACGCCAAGGTGGATGTCTGGA...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTAGGGGCGCAGGAGGGTaGGATCTCCCTCACAGGCGG +
Preference number: 4 (lower is better)
Translates to: PFTFTDEGTECQRVWGSARGAGG*DLPHRR
Trigger: CCGCCTGTGAGGGAGATCCCACCCTCCTGCGCCCCT...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCGCTGCAGACACGCGGTaGATGGGCTCTTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPAADTR*MGSFLS
Trigger: GCTGAGGAAAGAGCCCATCCACCGCGTGTCTGCAGC...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTGGGCCCTGGGGCCCTTaGCGAAAGCTCTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSGPWGP*RKLSRL
Trigger: CAGCCGAGAGAGCTTTCGCCAAGGGCCCCAGGGCCC...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGGTGGGAGAGGAGGCTaGAGCTTAGGGGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHGGRGG*SLGALP
Trigger: AGGCAGAGCCCCTAAGCTCCAGCCTCCTCTCCCACC...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCAGACTTGTTTGGCTCTaGGGGCTCTGGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGRLVWL*GLWWER
Trigger: CCTCTCCCACCAGAGCCCCCAGAGCCAAACAAGTCT...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCGCACCATGTTCCAGCTaGAGCTTCGAGCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPAPCSS*SFEPRP
Trigger: AGGCCGAGGCTCGAAGCTCCAGCTGGAACATGGTGC...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTGCTGAAGGCTGCAGCTaGGATCTGGCTGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPAEGCS*DLAADA
Trigger: GGCATCAGCAGCCAGATCCCAGCTGCAGCCTTCAGC...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGGTCGATGCCCGAGTCTaGCACCTCCATGTCGTAGCG +
Preference number: 4 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLVDARV*HLHVVA
Trigger: CGCTACGACATGGAGGTGCCAGACTCGGGCATCGAC...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGAGAGTGCCAGCGAGTCTaGGGCAGTGCTGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRECQRV*GSAGPE
Trigger: TTCAGGCCCAGCACTGCCCCAGACTCGCTGGCACTC...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACCTCCATGTCGTAGCGAACAGGAGTGCCAGCGAGTCTaGGGCAGTGCTGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: VCTAGRCPSLAPPCRSEQECQRV*GSAGPE
Trigger: TTCAGGCCCAGCACTGCCCCAGACTCGCTGGCACTC...CTGTTCGCTACGACATGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGGACAAAGGCTGTCTTaGCAAGATGTGGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPAGQRLS*QDVGMS
Trigger: GCTCATTCCCACATCTTGCCAAGACAGCCTTTGTCC...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GGCGATGTCTCCCACTTTGACCCGGTGGAACTCCCGGATGTGCAGGTGTTCACCCCCTGTTGGCCATGCTaGGTGCCGTCACCGACCTTG +
Preference number: 4 (lower is better)
Translates to: GDVSHFDPVELPDVQVFTPCWPC*VPSPTL
Trigger: CAAGGTCGGTGACGGCACCCAGCATGGCCAACAGGG...GGTGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp CTTGACCCTCCAGCTCCAGGCGAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGCACGTTGTCAGCTTTaGCGTCCCCATGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: LDPPAPGEAAIRGQCALQARCQL*RPHAES
Trigger: GGATTCTGCATGGGGACGTCAAAGCTGACAACGTGC...CTGCAGTGCACACTGGCCCCTGATGGCAGCTTCGCCTGGAGCTGGAGGGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGGGATGTAGTCCCCTGTaGGCAAGGACTTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLGCSPL*ARTFPG
Trigger: GCCTGGGAAAGTCCTTGCTCACAGGGGACTACATCC...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCGTGTCCCGCGAGCTTTaGGAGGCCTTTGATGGGTTC +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALIVSREL*EAFDGF
Trigger: GAACCCATCAAAGGCCTCTCAAAGCTCGCGGGACAC...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCCCAGCTGGCCATGCTTaGCCCTCCAGCTCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFPAGHA*PSSSRR
Trigger: TCGCCTGGAGCTGGAGGGTCAAGCATGGCCAGCTGG...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGAATCCCTGGGAACGGCTaGGCCTGTGTTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRIPGNG*ACVSGQ
Trigger: CTGCCCTGAAACACAGGCTCAGCCGTTCCCAGGGAT...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCGGGCCCTTACACACTTaGCACTCTCACAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALIGPLHT*HSHSSL
Trigger: CAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCC...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCATGCTACGTGAGTCCTaGGTAGCTCCCCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGMLRES*VAPLGE
Trigger: TTCTCCCAGGGGAGCTACTCAGGACTCACGTAGCAT...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CCTGGCTGCTCCAGGAGTGTACGCCTGAGCTCAGGGTGTCCCGCGAGCTTTGAGGGCAAGATGTGGGAATaGGCTTCTCCCACGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PGCSRSVRLSSGCPASFEGKMWE*ASPTES
Trigger: AGACTCCGTGGGAGAAGCTCATTCCCACATCTTGCC...CTCAAAGCTCGCGGGACACCCTGAGCTCAGGCGTACACTCCTGGAGCAGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCGATGGCAGCTGGCCCTaGCTCGGAGCCTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGDGSWP*LGAFLG
Trigger: GCCAAGGAAGGCTCCGAGGCAGGGCCAGCTGCCATC...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAAGAGGCTTGGTGAACTaGGGGGTGTTTCTAACATAT +
Preference number: 4 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGRGLVN*GVFLTY
Trigger: ATATGTTAGAAACACCCCGCAGTTCACCAAGCCTCT...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGACGTGGTTCAGACATTaGAAGGGGCTGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GQHRAPSRKAASGSVEPATWFRH*KGLISL
Trigger: CAAACTGATCAGCCCCTTGCAATGTCTGAACCACGT...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCTGCCATCAGCTCCTCTaGCCGAAATACTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGCHQLL*PKYFQP
Trigger: CGGCTGGAAGTATTTCGGGCAGAGGAGCTGATGGCA...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CTTGACCCTCCAGCTCCAGGCGAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGTGCCATCAGCTCCTCTaGCCGAAATACTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LDPPAPGEAAIRGQCALQCHQLL*PKYFQP
Trigger: CGGCTGGAAGTATTTCGGGCAGAGGAGCTGATGGCA...CTGCAGTGCACACTGGCCCCTGATGGCAGCTTCGCCTGGAGCTGGAGGGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCGACCAAGCTGAAGGCTaGAGCTGGGATCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPDQAEG*SWDLAA
Trigger: AGCAGCCAGATCCCAGCTGCAGCCTTCAGCTTGGTC...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTGCTCTCCCCTGTCTaGCAGCAAATGGTCACTGAT +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLLLSPV*QQMVTD
Trigger: ATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCAG...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCGCGGCGTCTTCTCCTTaGCTTTGGGGAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGAASSP*LWGVPS
Trigger: AGAAGGAACTCCCCAAAGCCAAGGAGAAGACGCCGC...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCCTGTTTCTTCCCCAGTaGCGGCGTCTTCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPLFLPQ*RRLLLG
Trigger: GCCAAGGAGAAGACGCCGCCACTGGGGAAGAAACAG...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTGTGGGGCTGAACTCTTaGCTATTCTCACACTCAGCC +
Preference number: 4 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSVGLNS*LFSHSA
Trigger: GGCTGAGTGTGAGAATAGCCAAGAGTTCAGCCCCAC...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCCCTCAGTTTTGGGGCTaGGCTCCCGGGATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLPQFWG*APGIWS
Trigger: GCTCCAGATCCCGGGAGCCCAGCCCCAAAACTGAGG...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGACGTTGTCCTCAGTTTTaGGGCTGGGCTCCCGGGATC +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRRCPQF*GWAPGI
Trigger: GATCCCGGGAGCCCAGCCCCAAAACTGAGGACAACG...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCCGTGGCTCCCATCGCTaGACAGGAGCACGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPRGSHR*TGARCQ
Trigger: CTGACAACGTGCTCCTGTCCAGCGATGGGAGCCACG...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATTCCAGACATCCACCTTaGCGTCGCAGCTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHSRHPP*RRSSCP
Trigger: TGGGCAGGAGCTGCGACGCCAAGGTGGATGTCTGGA...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TCTGCCATGAACTTGGTGAGCCTCCGCAGCTGGATCTCCCCTTGTACCCCCAGAGGTGGGAGAGGAGGCTaGAGCTTAGGGGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SAMNLVSLRSWISPCTPRGGRGG*SLGALP
Trigger: AGGCAGAGCCCCTAAGCTCCAGCCTCCTCTCCCACC...TCTGGGGGTACAAGGGGAGATCCAGCTGCGGAGGCTCACCAAGTTCATGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCCGCTCTGGTGAGCTaGGGTTTCTGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CSPLSASKWSLIQAGQANSALVS*GFWQGL
Trigger: CAGCCCCTGCCAGAAACCCCAGCTCACCAGAGCGGA...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGGCTGCTGATGCCAGTGGCGATGTCTCCCACTTTGACCCGGTGGAACTCCCGACCATTGAAATAGCTTaGGGTGTCGGTGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LAADASGDVSHFDPVELPTIEIA*GVGGPP
Trigger: GGGCGGCCCACCGACACCCCAAGCTATTTCAATGGT...CGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCCACTGGCATCAGCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGACCCACTTTGACCCGGTaGAACTCCCGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRPTLTR*NSRMCR
Trigger: CCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGG...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCACTCTCACAGCAGCCTaGAGGGTGAGGGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGTLTAA*RVRGRG
Trigger: CCCTCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGT...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCAAAGGGGCACATGTCTaGGGACTGAGAACCACTTCA +
Preference number: 4 (lower is better)
Translates to: LLPAVWSRRWRAGLGPVLKGAHV*GLRTTS
Trigger: TGAAGTGGTTCTCAGTCCCCAGACATGTGCCCCTTT...GAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp GCCTTTGATGGGTTCTTCTCACTGTCATCCGACAGGGAGAGGCTGTCGATGCTGGTCGGCAGTACCCTCTaGCCAGGGGCAGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: AFDGFFSLSSDRERLSMLVGSTL*PGAGQG
Trigger: ACCCTGCCCTGCCCCTGGCCAGAGGGTACTGCCGAC...CAGCATCGACAGCCTCTCCCTGTCGGATGACAGTGAGAAGAACCCATCAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp GGCTCTTCAGACCTCCCACTTGCTGTAGTGCCCGGTTCACCTTCCCTCCCAGCTCAGTTCTTTATGTGCTaGGGGCCGGGGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GSSDLPLAVVPGSPSLPAQFFMC*GPGLSP
Trigger: GGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTG...AGCTGGGAGGGAAGGTGAACCGGGCACTACAGCAAGTGGGAGGTCTGAAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCGTGAGCCTCCGCAGCTaGATCTCCCCTTGTACCCCC +
Preference number: 4 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKIVSLRS*ISPCTP
Trigger: GGGGGTACAAGGGGAGATCCAGCTGCGGAGGCTCAC...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTGCACGTTGTCAGCTTTaGCGTCCCCATGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPARCQL*RPHAES
Trigger: GGATTCTGCATGGGGACGTCAAAGCTGACAACGTGC...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGGCTTTGAGAGGCCTTTaGTGGGTTCTTCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLALRGL*WVLLTV
Trigger: GACAGTGAGAAGAACCCATCAAAGGCCTCTCAAAGC...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCGGCAGGGCTCAGGTGTaGAATCCTGGGAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPGRAQV*NPGRHS
Trigger: AGAATGCCTCCCAGGATTTCACACCTGAGCCCTGCC...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTGGTGAGCTGGCCAGGTaGGGCCAGGCAAGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSGELAR*GQARGL
Trigger: TAAACCCCTTGCCTGGCCTCACCTGGCCAGCTCACC...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp GAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACTCTTTGGTCCTTGGCTaGACCAGAGGTCAACTCAGG +
Preference number: 4 (lower is better)
Translates to: EAAIRGQCALQVDARVWHSLVLG*TRGQLR
Trigger: CCTGAGTTGACCTCTGGTTCAGCCAAGGACCAAAGA...GTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTATGCTACGTGAGTCCTaGGTAGCTCCCCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPMLRES*VAPLGE
Trigger: TTCTCCCAGGGGAGCTACTCAGGACTCACGTAGCAT...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTTGCCGTCACCGACCTTaGGGCAGAGCGGCCCTCGGA +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTCRHRP*GRAALG
Trigger: TCCGAGGGCCGCTCTGCCTCAAGGTCGGTGACGGCA...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCCATCTCCCAGGCTTGTaGTCATCCGGCCAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFHLPGL*SSGQAP
Trigger: CGGCGCTTGGCCGGATGAGCACAAGCCTGGGAGATG...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344686.8
CDS-3UTR GCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTCTTCCGGGCTTTGCTaGGACGCTTTCCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPSSGLC*DAFPSN
Trigger: GTTGGAAGGGAAAGCGTCGCAGCAAAGCCCGGAAGA...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTCCTGCACTGGGATGGTaGAGCTCTCCTGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSPALGW*SSPAQG
Trigger: CCCCTGAGCAGGAGAGCTGCACCATCCCAGTGCAGG...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCCCGTCCTGGGGGTGGTaGAGTTTCCACACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLPSWGW*SFHTWF
Trigger: GAACCACGTGTGGAAACTGCACCACCCCCAGGACGG...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGAGGCCTGAGCTCACGCTaGCTTGCAGAGCATGCACTA +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRGLSSR*LAEHAL
Trigger: TAGTGCATGCTCTGCAAGGCAGCGTGAGCTCAGGCC...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGTTGTCCTCCATCCTGTaGACCTCTCCGAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLLSSIL*TSPKEP
Trigger: AGGCTCCTTCGGAGAGGTGCACAGGATGGAGGACAA...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GGCTCGCTGGCAATCTGCCATGAACTTGGTGAGCCTCCGCAGCTGGATCTCCCCTTGTCCTCCATCCTGTaGACCTCTCCGAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GSLAICHELGEPPQLDLPLSSIL*TSPKEP
Trigger: AGGCTCCTTCGGAGAGGTGCACAGGATGGAGGACAA...GGGGAGATCCAGCTGCGGAGGCTCACCAAGTTCATGGCAGATTGCCAGCGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCGGTCAATCCTGCACATaGCATCAGCTCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPGQSCT*HQLLCP
Trigger: CGGGCAGAGGAGCTGATGGCATGTGCAGGATTGACC...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCTCTGGGAGACAGCCCTaGTCCTTGACCAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFSGRQP*SLTSWP
Trigger: GGGCCAGCTGGTCAAGGAGCAGGGCTGTCTCCCAGA...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGAAAAGTCACAGAGGGCTaGGTGGCTCCCATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRKVTEG*VAPIAG
Trigger: TCCAGCGATGGGAGCCACGCAGCCCTCTGTGACTTT...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCCCATGTGGGTCTCTGTaGCAGGGATGTAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPPCGSL*QGCSPL
Trigger: CAGGGGACTACATCCCTGGCACAGAGACCCACATGG...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACCTCCATGTCGTAGCGAACAGGACCAAGCTGAAGGCTaGAGCTGGGATCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VCTAGRCPSLAPPCRSEQDQAEG*SWDLAA
Trigger: AGCAGCCAGATCCCAGCTGCAGCCTTCAGCTTGGTC...CTGTTCGCTACGACATGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTCTCGGCGTCCCCTaGCCCAGGAGGTTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGSLGVP*PRRLRL
Trigger: TAGCCTCAACCTCCTGGGGCAGGGGACGCCGAGACT...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCGAGTTGCCCAAGGCCTaGTTCCTTCAGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPELPKA*FLQRLG
Trigger: ACCAAGCCTCTGAAGGAACCAGGCCTTGGGCAACTC...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTGCTGGGCTCCAGGTGTaGGCCAGGCAGGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTAGLQV*ARQGLW
Trigger: CCAAAGCCCCTGCCTGGCCCACACCTGGAGCCCAGC...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCACAAAGGGACAATTCTaGGTGAGGTCAATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LLPAVWSRRWRAGLGPVLTKGQF*VRSILH
Trigger: GTGCAGGATTGACCTCACCCAGAATTGTCCCTTTGT...GAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCCGTGGCTCCCATCGCTaGACAGGAGCACGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLRGSHR*TGARCQ
Trigger: CTGACAACGTGCTCCTGTCCAGCGATGGGAGCCACG...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TCTGCCATGAACTTGGTGAGCCTCCGCAGCTGGATCTCCCCTTGTACCCCCAGATCCAGACATCCACCTTaGCGTCGCAGCTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SAMNLVSLRSWISPCTPRSRHPP*RRSSCP
Trigger: TGGGCAGGAGCTGCGACGCCAAGGTGGATGTCTGGA...TCTGGGGGTACAAGGGGAGATCCAGCTGCGGAGGCTCACCAAGTTCATGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCGCTGCAGACACGCGGTaGATGGGCTCTTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLAADTR*MGSFLS
Trigger: GCTGAGGAAAGAGCCCATCCACCGCGTGTCTGCAGC...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTGGGTCTGGTGGTAATTaGCTTGATTTGGCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSGSGGN*LDLAVD
Trigger: ATCCACCGCCAAATCAAGCCAATTACCACCAGACCC...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTGGTGGGAGAGGAGGCTaGAGCTTAGGGGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSGGRGG*SLGALP
Trigger: AGGCAGAGCCCCTAAGCTCCAGCCTCCTCTCCCACC...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACCTCCTCCAGAGAAAATaGCTGGGACAGGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: EAAIRGQCALQVDARVWHLLQRK*LGQAVE
Trigger: CTCAACAGCCTGTCCCAGCCATTTTCTCTGGAGGAG...GTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTCTTCGAGCCTCGGCCTaGCTGCTCCAGGAGTGTACG +
Preference number: 4 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSLRASA*LLQECT
Trigger: CGTACACTCCTGGAGCAGCCAGGCCGAGGCTCGAAG...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACGCACCATGTTCCAGCTaGAGCTTCGAGCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: CSPLSASKWSLIQAGQANAPCSS*SFEPRP
Trigger: AGGCCGAGGCTCGAAGCTCCAGCTGGAACATGGTGC...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCGCTGCAGCTGGGATCTaGCTGCTGATGCCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGAAAGI*LLMPVA
Trigger: CGCCACTGGCATCAGCAGCCAGATCCCAGCTGCAGC...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTGTGTGGAGCCGGCGGTaGAGGGCAGGGTTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTVWSRR*RAGLGP
Trigger: AGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACAC...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GAAGCTGCCATCAGGGGCCAGTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACTCAGGTGTGAAATCCTaGGAGGCATTCTGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: EAAIRGQCALQVDARVWHSGVKS*EAFCLP
Trigger: GGGCAAGCAGAATGCCTCCCAGGATTTCACACCTGA...GTGCCAGACTCGGGCATCGACCTGCAGTGCACACTGGCCCCTGATGGCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCCTGTCTGCCAGCAAATaGTCACTGATCCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGLSASK*SLIQAG
Trigger: ACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAG...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGGGACAAAGGCTGTCTTaGCAAGATGTGGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLGQRLS*QDVGMS
Trigger: GCTCATTCCCACATCTTGCCAAGACAGCCTTTGTCC...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTCAATGTGGACAGCTaGACAAAGGCTGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLLNVDS*TKAVLA
Trigger: TGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAG...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCCAGTTCTTTATGTGCTaGGGGCCGGGGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLQFFMC*GPGLSP
Trigger: GGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTG...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CAA 72 bp CTATTTCCAGCTGCTGCAGTTCCTGCTCCGGGACGGTaGCTTTCCGCTCTGGTGAGCTGGGGTTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LFPAAAVPAPGR*LSALVSWGFWQ
Trigger: CTGCCAGAAACCCCAGCTCACCAGAGCGGAAAGCAACCGTCCCGGAGCAGGAACTGCAGCAGCTGGAAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGGTTTGGACCCAGCGATaGAAATGCGTTCTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: STLDTDSGAGAPERLSLLVWTQR*KCVLKR
Trigger: CCTTTTCAGAACGCATTTTCATCGCTGGGTCCAAAC...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTGTTTGGACCCAGCGATaGAAATGCGTTCTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSVWTQR*KCVLKR
Trigger: CCTTTTCAGAACGCATTTTCATCGCTGGGTCCAAAC...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTCAGTTTGTGGAGTTCTaGTCGAGGCAGAGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSQFVEF*SRQSRP
Trigger: CGGCCGGCTCTGCCTCGATCAGAACTCCACAAACTG...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCGGATGTAGTCCCCTGTaGGCAAGGACTTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKIGCSPL*ARTFPG
Trigger: GCCTGGGAAAGTCCTTGCTCACAGGGGACTACATCC...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCAGAGGCTGTCGATGCTaGGGCACGAGAGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALIRGCRC*GTREFA
Trigger: AGCAAATTCTCTCGTGCCTCAGCATCGACAGCCTCT...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCCGATGTCTCCCACTTTaGCCCGGTGGAACTCCCGGA +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFRCLPL*PGGTPG
Trigger: TCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCG...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCCGATGTCTCCCACTTTaGCCCGGTGGAACTCCCGGA +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGRCLPL*PGGTPG
Trigger: TCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCG...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTCTTTGGTCCTTGGCTaGACCAGAGGTCAACTCAGG +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPSLVLG*TRGQLR
Trigger: CCTGAGTTGACCTCTGGTTCAGCCAAGGACCAAAGA...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTGCCATGAAAGTGCTTTaGGGTCATCAGAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSAMKVL*GHQSAK
Trigger: CTTTGCACTCTGATGACCTCAAAGCACTTTCATGGC...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCGGCAAGATGTGGGAATaGGCTTCTCCCACGGAGTCT +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPGKMWE*ASPTES
Trigger: AGACTCCGTGGGAGAAGCTCATTCCCACATCTTGCC...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGACTACACAGGCCAGTTTaGCCAGGAAGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRLHRPV*PGRTPE
Trigger: CTCTGGAGTCCTTCCTGGGCAAACTGGCCTGTGTAG...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCCTCCGAAGGAGCCTCTaGCCAGGCGGAGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVLRRSL*PGGAGA
Trigger: CGCACCAGCTCCGCCTGGGCAGAGGCTCCTTCGGAG...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTCCCAGACTCCTCCTTaGTCAAAGTCAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPSQTPP*SKSREE
Trigger: CTCCTCCCTTGACTTTGAGCAAGGAGGAGTCTGGGA...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TTGGACTTTCACACCATTGAAATAGCTTGGGGTGTCGGTGGGCCGCCCCCGGGCTCTATTTCCAGCTGCTaGAGTTCCTGCTCCGGGACG +
Preference number: 4 (lower is better)
Translates to: LDFHTIEIAWGVGGPPPGSISSC*SSCSGT
Trigger: CGTCCCGGAGCAGGAACTGCAGCAGCTGGAAATAGA...GCCCGGGGGCGGCCCACCGACACCCCAAGCTATTTCAATGGTGTGAAAGTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCGACCAAGCTGAAGGCTaGAGCTGGGATCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKIDQAEG*SWDLAA
Trigger: AGCAGCCAGATCCCAGCTGCAGCCTTCAGCTTGGTC...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGTCCCGAGGTAACTCCTaGCATCCTCCTCTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLSRGNS*HPPLSL
Trigger: AAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGGA...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTCTGCTCTCCCCTGTCTaGCAGCAAATGGTCACTGAT +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPLLSPV*QQMVTD
Trigger: ATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCAG...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTACAGTGTCACTGCCCTaGCCTGCCCTGCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTTVSLP*PALPEG
Trigger: GCCCTCTGGCAGGGCAGGGCAGGGCAGTGACACTGT...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCCTACAACCCAGACTCTaGAGTACCAAGGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGLQPRL*STKAAV
Trigger: AACTGCAGCCTTGGTACTGCAGAGTCTGGGTTGTAG...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGAGCGGCGTCTTCTCCTTaGCTTTGGGGAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRAASSP*LWGVPS
Trigger: AGAAGGAACTCCCCAAAGCCAAGGAGAAGACGCCGC...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCGATAGAGATGGCAGCTaGCCCTGCCTCGGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGDRDGS*PCLGAF
Trigger: GAAGGCTCCGAGGCAGGGCCAGCTGCCATCTCTATC...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTTGCCCTCTGTAGCATaGGCCACATTGTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPLPSVA*ATLLGI
Trigger: GATCCCCAACAATGTGGCCCATGCTACAGAGGGCAA...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCCAGTTTGCTCAGGTGTaGGTCAGGCAAGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALIQFAQV*VRQGFL
Trigger: CAGAAACCCTTGCCTGACCCACACCTGAGCAAACTG...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCACAGAAAACTTCTCATaGGCACCACGAGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGTENFS*APRDRQ
Trigger: CTGCCTGTCTCGTGGTGCCCATGAGAAGTTTTCTGT...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACTTGCTGCCCAGGTCTTaGCCAGGCTGGTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHLLPRS*PGWSGC
Trigger: ACAGCCTGACCAGCCTGGCCAAGACCTGGGCAGCAA...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCAGAATCCTTCGTGAGTaGAGGTATTCCAGACCCTCC +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGRILRE*RYSRPS
Trigger: GGAGGGTCTGGAATACCTCCACTCACGAAGGATTCT...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTCCCTCTTGGATGGCCTaGGCTGTGAGAGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTPSWMA*AVRGAQ
Trigger: CTGCGCCCCTCTCACAGCCCAGGCCATCCAAGAGGG...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTGCTGCAGACACGCGGTaGATGGGCTCTTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PFTFTDEGTECQRVWGSAAADTR*MGSFLS
Trigger: GCTGAGGAAAGAGCCCATCCACCGCGTGTCTGCAGC...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACGGGAGGAGACTTGTTTaGCTCTGGGGGCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHGRRLV*LWGLWW
Trigger: CCACCAGAGCCCCCAGAGCCAAACAAGTCTCCTCCC...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCGCTGAAGGCTGCAGCTaGGATCTGGCTGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGAEGCS*DLAADA
Trigger: GGCATCAGCAGCCAGATCCCAGCTGCAGCCTTCAGC...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCCTGCTTCCGGCAGTGTaGAGCCGGCGGTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVLLPAV*SRRWRA
Trigger: TGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTACTCTCACAGCAGCCTaGAGGGTGAGGGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTTLTAA*RVRGRG
Trigger: CCCTCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGT...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTGGGGAACCAGCACGCTaGACACTGATAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PFTFTDEGTECQRVWGSAGEPAR*TLIVGL
Trigger: CAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCCCC...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp GTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACCTCCATGTCGTAGCGAACAGAGAGGCTGTCGATGCTaGGGCACGAGAGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: VCTAGRCPSLAPPCRSEQRGCRC*GTREFA
Trigger: AGCAAATTCTCTCGTGCCTCAGCATCGACAGCCTCT...CTGTTCGCTACGACATGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCGGACTTTCACACCATTaGAATAGCTTGGGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALIGLSHH*NSLGCR
Trigger: CCGACACCCCAAGCTATTTCAATGGTGTGAAAGTCC...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACCCAGCAAATGGTCACTaGTCCAAGCGGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHPANGH*SKRVRP
Trigger: TGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGG...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCGGGCCCTTACACACTTaGCACTCTCACAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFGPLHT*HSHSSL
Trigger: CAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCC...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCCACATGTCTGGGGACTaGGAACCACTTCACTTACAC +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPHMSGD*EPLHLH
Trigger: GTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATGTG...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CAGGAGGGTGGGATCTCCCTCACAGGCGGAGGCTCGCTGGCAATCTGCCATGAACTAGCAGACACCCCCTaGCGATTCACAGCTGATTTA +
Preference number: 4 (lower is better)
Translates to: QEGGISLTGGGSLAICHELADTP*RFTADL
Trigger: TAAATCAGCTGTGAATCGTCAGGGGGTGTCTGCTAG...TTCATGGCAGATTGCCAGCGAGCCTCCGCCTGTGAGGGAGATCCCACCCTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCGGCCATTTCCATCACTaGCATCTCCCAGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKIGHFHH*HLPGLC
Trigger: GCACAAGCCTGGGAGATGGCAGTGATGGAAATGGCC...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACGTTTCTTCCGGGCTTTaGTGCGACGCTTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: CSPLSASKWSLIQAGQANVSSGL*CDAFPS
Trigger: GGAAGGGAAAGCGTCGCAGCAAAGCCCGGAAGAAAC...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACCTACACAGGCCAGTTTaGCCAGGAAGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: CSPLSASKWSLIQAGQANLHRPV*PGRTPE
Trigger: CTCTGGAGTCCTTCCTGGGCAAACTGGCCTGTGTAG...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGCTGCCTTGCAGAGCATaGACTAGGTATTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLLPCRA*TRYSST
Trigger: TGTGGAGGAATACCTAGTGCATGCTCTGCAAGGCAG...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCCCCAGGCGGAGCTGGTaGGTGGCCCAGTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVPRRSW*VAQWTS
Trigger: AGAAGTCCACTGGGCCACGCACCAGCTCCGCCTGGG...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTCCCAGACTCCTCCTTaGTCAAAGTCAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPSQTPP*SKSREE
Trigger: CTCCTCCCTTGACTTTGAGCAAGGAGGAGTCTGGGA...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCTGGAACTCCCGGATGTaGAGGTGTTCACCATTAAGA +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGWNSRM*RCSPLR
Trigger: TCTTAATGGTGAACACCTGCACATCCGGGAGTTCCA...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCCTGCTGACCTGGTTCTaGACTGAACCTGAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPLLTWF*TEPEFG
Trigger: CCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAG...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCTGTGATGCTGAGCTGTaGTCTGGGGAACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGCDAEL*SGEPAR
Trigger: GCGTGCTGGTTCCCCAGAGCACAGCTCAGCATCACA...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTGTCACTGCCCTGCCCTaGCCTGCCAGAGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLAVTALP*PARGQP
Trigger: TGGCTGCCCTCTGGCAGGGCAGGGCAGGGCAGTGAC...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACCTGCAGTTCTTTATGTaGTGGGGGCCGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHLQFFM*WGPGLS
Trigger: AGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAG...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTCTGCAGTACCAAGGCTaGAGTTCTTTATGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPLQYQG*SSLCAG
Trigger: CCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCCTGCAGTACCAAGGCTaGAGTTCTTTATGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALILQYQG*SSLCAG
Trigger: CCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCATATGGGGCGCCGAGTaGAGACTCATCCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGIWGAE*RLILLH
Trigger: GTGCAGGAGGATGAGTCTCCACTCGGCGCCCCATAT...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACGAGTTGCCCAAGGCCTaGTTCCTTCAGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: CSPLSASKWSLIQAGQANELPKA*FLQRLG
Trigger: ACCAAGCCTCTGAAGGAACCAGGCCTTGGGCAACTC...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCACAGAAAACTTCTCATaGGCACCACGAGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPTENFS*APRDRQ
Trigger: CTGCCTGTCTCGTGGTGCCCATGAGAAGTTTTCTGT...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCACAAAGGGACAATTCTaGGTGAGGTCAATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGTKGQF*VRSILH
Trigger: GTGCAGGATTGACCTCACCCAGAATTGTCCCTTTGT...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTAGAATCCTTCGTGAGTaGAGGTATTCCAGACCCTCC +
Preference number: 4 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPRILRE*RYSRPS
Trigger: GGAGGGTCTGGAATACCTCCACTCACGAAGGATTCT...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTGGGCCCTGGGGCCCTTaGCGAAAGCTCTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVGPWGP*RKLSRL
Trigger: CAGCCGAGAGAGCTTTCGCCAAGGGCCCCAGGGCCC...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCAGACTTGTTTGGCTCTaGGGGCTCTGGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFRLVWL*GLWWER
Trigger: CCTCTCCCACCAGAGCCCCCAGAGCCAAACAAGTCT...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCCTCCTCCAGAGAAAATaGCTGGGACAGGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPLLQRK*LGQAVE
Trigger: CTCAACAGCCTGTCCCAGCCATTTTCTCTGGAGGAG...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACACCATTGAAATAGCTTaGGGTGTCGGTGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHTIEIA*GVGGPP
Trigger: GGGCGGCCCACCGACACCCCAAGCTATTTCAATGGT...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTGTGTGGAGCCGGCGGTaGAGGGCAGGGTTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLAVWSRR*RAGLGP
Trigger: AGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACAC...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGACGGGGCCTGCTGCTCTaGGGAAGAGTGGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGRGLLL*GRVVAS
Trigger: GCTGGCTACCACTCTTCCCCAGAGCAGCAGGCCCCG...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCCGGGGCCTGCTGCTCTaGGGAAGAGTGGTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVRGLLL*GRVVAS
Trigger: GCTGGCTACCACTCTTCCCCAGAGCAGCAGGCCCCG...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCCAGTCTGACTCAATGTaGACAGCTGGACAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALIQSDSM*TAGQRL
Trigger: CAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CAA 72 bp ATCTGGCTGCTGATGCCAGTGGCGATGTCTCCCACTTaGACCCGGTGGAACTCCCGGATGTGCAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: IWLLMPVAMSPT*TRWNSRMCRCS
Trigger: TGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCCACTGGCATCAGCAGCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGACTGAAAAGGTGGGGCTaGACTCTTGGCTATTCTCAC +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRLKRWG*TLGYSH
Trigger: GTGAGAATAGCCAAGAGTTCAGCCCCACCTTTTCAG...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGGATGAAAATGCGTTCTaGAAAGGTGGGGCTGAACTC +
Preference number: 4 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLDENAF*KGGAEL
Trigger: GAGTTCAGCCCCACCTTTTCAGAACGCATTTTCATC...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCATGAGCCAGGGACTTTaGGCTCTTCTTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPMSQGL*ALLLPF
Trigger: AAACGGAAGAAGAAGAGCTCAAAGTCCCTGGCTCAT...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGAGACATTGCAAGGGGCTaGTCAGTTTGTGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRDIARG*SVCGVL
Trigger: CAGAACTCCACAAACTGATCAGCCCCTTGCAATGTC...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCGCTTTGAGAGGCCTTTaGTGGGTTCTTCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPALRGL*WVLLTV
Trigger: GACAGTGAGAAGAACCCATCAAAGGCCTCTCAAAGC...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAGGTGAGCTGGCCAGGTaGGGCCAGGCAAGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGGELAR*GQARGL
Trigger: TAAACCCCTTGCCTGGCCTCACCTGGCCAGCTCACC...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CTGGCTGCTGATGCCAGTGGCGATGTCTCCCACTTTGACCCGGTGGAACTCCCGGCCATGAAAGTGCTTTaGGGTCATCAGAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LAADASGDVSHFDPVELPAMKVL*GHQSAK
Trigger: CTTTGCACTCTGATGACCTCAAAGCACTTTCATGGC...CGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCCACTGGCATCAGCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTGGCAAGATGTGGGAATaGGCTTCTCCCACGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PFTFTDEGTECQRVWGSAGKMWE*ASPTES
Trigger: AGACTCCGTGGGAGAAGCTCATTCCCACATCTTGCC...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACGGCCATTTCCATCACTaGCATCTCCCAGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHGHFHH*HLPGLC
Trigger: GCACAAGCCTGGGAGATGGCAGTGATGGAAATGGCC...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGGATGGCAGCTGGCCCTaGCTCGGAGCCTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRDGSWP*LGAFLG
Trigger: GCCAAGGAAGGCTCCGAGGCAGGGCCAGCTGCCATC...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTTCTTCCGGGCTTTGCTaGGACGCTTTCCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PFTFTDEGTECQRVWGSASSGLC*DAFPSN
Trigger: GTTGGAAGGGAAAGCGTCGCAGCAAAGCCCGGAAGA...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCCCTGCACTGGGATGGTaGAGCTCTCCTGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVPALGW*SSPAQG
Trigger: CCCCTGAGCAGGAGAGCTGCACCATCCCAGTGCAGG...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTCTACACAGGCCAGTTTaGTCAGGTGTGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSLHRPV*SGVGQA
Trigger: TGCCTGACCCACACCTGAGCAAACTGGCCTGTGTAG...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATCTGCCTTGCAGAGCATaGACTAGGTATTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHLPCRA*TRYSST
Trigger: TGTGGAGGAATACCTAGTGCATGCTCTGCAAGGCAG...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACTGCCATCAGCTCCTCTaGCCGAAATACTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHCHQLL*PKYFQP
Trigger: CGGCTGGAAGTATTTCGGGCAGAGGAGCTGATGGCA...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GCCTTTGATGGGTTCTTCTCACTGTCATCCGACAGGGAGAGGCTGTCGATGCTGCCATGTGGGTCTCTGTaGCAGGGATGTAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: AFDGFFSLSSDRERLSMLPCGSL*QGCSPL
Trigger: CAGGGGACTACATCCCTGGCACAGAGACCCACATGG...CAGCATCGACAGCCTCTCCCTGTCGGATGACAGTGAGAAGAACCCATCAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCTCTATTTCCAGCTGCTaGAGTTCCTGCTCCGGGACG +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFSISSC*SSCSGT
Trigger: CGTCCCGGAGCAGGAACTGCAGCAGCTGGAAATAGA...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTCTATTTCCAGCTGCTaGAGTTCCTGCTCCGGGACG +
Preference number: 4 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSSISSC*SSCSGT
Trigger: CGTCCCGGAGCAGGAACTGCAGCAGCTGGAAATAGA...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TTGGACTTTCACACCATTGAAATAGCTTGGGGTGTCGGTGGGCCGCCCCCGGGCAATTCTATTTCCAGCTaGTGCAGTTCCTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LDFHTIEIAWGVGGPPPGNSISS*CSSCSG
Trigger: CCCGGAGCAGGAACTGCAGCAGCTGGAAATAGAATT...GCCCGGGGGCGGCCCACCGACACCCCAAGCTATTTCAATGGTGTGAAAGTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACCGAGCAGGAAGGCTaGTTCCGGCAGTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGTEQEG*FRQCGA
Trigger: GGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGT...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCTCCCGAGGTAACTCCTaGCATCCTCCTCTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLSRGNS*HPPLSL
Trigger: AAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGGA...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACCTGCTGACCTGGTTCTaGACTGAACCTGAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: CSPLSASKWSLIQAGQANLLTWF*TEPEFG
Trigger: CCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAG...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTCATCAGAGTGCAAAGTaGCGTCGGCAGTACCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSHQSAK*RRQYPL
Trigger: CAGAGGGTACTGCCGACGGCACTTTGCACTCTGATG...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCCTCCTACAGTGTCACTaGCCTGCCCTGCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVLLQCH*PALPCQ
Trigger: CTGGCAGGGCAGGGCAGGGCAGTGACACTGTAGGAG...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGAGGGTCTGGTGGTAATTaGCTTGATTTGGCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRGSGGN*LDLAVD
Trigger: ATCCACCGCCAAATCAAGCCAATTACCACCAGACCC...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCCTTTGATGGGTTCTTCTCACTGTCATCCGACAGGGAGAGGCTGTCGATGCTGAGACTTGTTTGGCTCTaGGGGCTCTGGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AFDGFFSLSSDRERLSMLRLVWL*GLWWER
Trigger: CCTCTCCCACCAGAGCCCCCAGAGCCAAACAAGTCT...CAGCATCGACAGCCTCTCCCTGTCGGATGACAGTGAGAAGAACCCATCAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTGGGAGGAGACTTGTTTaGCTCTGGGGGCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTGRRLV*LWGLWW
Trigger: CCACCAGAGCCCCCAGAGCCAAACAAGTCTCCTCCC...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCCTCCTCCAGAGAAAATaGCTGGGACAGGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLLLQRK*LGQAVE
Trigger: CTCAACAGCCTGTCCCAGCCATTTTCTCTGGAGGAG...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAGCTGCAGCTGGGATCTaGCTGCTGATGCCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGAAAGI*LLMPVA
Trigger: CGCCACTGGCATCAGCAGCCAGATCCCAGCTGCAGC...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTGCTGAAGGCTGCAGCTaGGATCTGGCTGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTAEGCS*DLAADA
Trigger: GGCATCAGCAGCCAGATCCCAGCTGCAGCCTTCAGC...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCACCTTCTTTGGTCCTTaGCTGAACCAGAGGTCAACT +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALITFFGP*LNQRST
Trigger: AGTTGACCTCTGGTTCAGCCAAGGACCAAAGAAGGT...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGAAAAGGGGCACATGTCTaGGGACTGAGAACCACTTCA +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRKGAHV*GLRTTS
Trigger: TGAAGTGGTTCTCAGTCCCCAGACATGTGCCCCTTT...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGACAGTCTGACTCAATGTaGACAGCTGGACAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRQSDSM*TAGQRL
Trigger: CAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACCTGAAAAGGTGGGGCTaGACTCTTGGCTATTCTCAC +
Preference number: 4 (lower is better)
Translates to: CSPLSASKWSLIQAGQANLKRWG*TLGYSH
Trigger: GTGAGAATAGCCAAGAGTTCAGCCCCACCTTTTCAG...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCGGACTTTCACACCATTaGAATAGCTTGGGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKIGLSHH*NSLGCR
Trigger: CCGACACCCCAAGCTATTTCAATGGTGTGAAAGTCC...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAGGCGGGCATACCTGCTaGCCTGGTTCTGCACTGAAC +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGGGHTC*PGSALN
Trigger: GTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCC...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCGGCGGGCATACCTGCTaGCCTGGTTCTGCACTGAAC +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVGGHTC*PGSALN
Trigger: GTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCC...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTTCTTTGGTCCTTGGCTaGACCAGAGGTCAACTCAGG +
Preference number: 4 (lower is better)
Translates to: PFTFTDEGTECQRVWGSASLVLG*TRGQLR
Trigger: CCTGAGTTGACCTCTGGTTCAGCCAAGGACCAAAGA...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGATCCCCGGGAGCAGTCTaGCTCAATGTGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGSPGAV*LNVDSW
Trigger: CCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGA...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCGGCTTGTGCTCATCCTaGGAGAGACCAAACACAGAG +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGGLCSS*ERPNTE
Trigger: CTCTGTGTTTGGTCTCTCTCAGGATGAGCACAAGCC...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376926.8
CDS-3UTR GCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCGAGCTCACGCTGCCTTaGAGAGCATGCACTAGGTAT +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFELTLP*RACTRY
Trigger: ATACCTAGTGCATGCTCTGCAAGGCAGCGTGAGCTC...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCGAGCTCACGCTGCCTTaGAGAGCATGCACTAGGTAT +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGELTLP*RACTRY
Trigger: ATACCTAGTGCATGCTCTGCAAGGCAGCGTGAGCTC...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCGCTTTGACGTCCCCATaGAGAATCCTTCGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFALTSP*RILREW
Trigger: CCACTCACGAAGGATTCTGCATGGGGACGTCAAAGC...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTAAAGTCACAGAGGGCTaGGTGGCTCCCATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTKVTEG*VAPIAG
Trigger: TCCAGCGATGGGAGCCACGCAGCCCTCTGTGACTTT...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACGCATCATACAGCAGCTaGTCCAGACATCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHASYSS*SRHPPW
Trigger: CCAAGGTGGATGTCTGGAGCAGCTGCTGTATGATGC...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCAATTCTATTTCCAGCTaGTGCAGTTCCTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKINSISS*CSSCSG
Trigger: CCCGGAGCAGGAACTGCAGCAGCTGGAAATAGAATT...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GGCGATGTCTCCCACTTTGACCCGGTGGAACTCCCGGATGTGCAGGTGTTCACCTGGAACTCCCGGATGTaGAGGTGTTCACCATTAAGA +
Preference number: 4 (lower is better)
Translates to: GDVSHFDPVELPDVQVFTWNSRM*RCSPLR
Trigger: TCTTAATGGTGAACACCTGCACATCCGGGAGTTCCA...GGTGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR GCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCTTGAGGTCATCAGAGTaGAAAGTGCCGTCGGCAGTA +
Preference number: 4 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLLRSSE*KVPSAV
Trigger: TACTGCCGACGGCACTTTGCACTCTGATGACCTCAA...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCTTCTCACACTCAGCCTaGGCGATGATAGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKIFSHSA*AMIEMA
Trigger: TGCCATCTCTATCATCGCCCAGGCTGAGTGTGAGAA...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCTCAAGACTCTCGGACTaGCTGTACTGTTTGGACCCA +
Preference number: 4 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLSRLSD*LYCLDP
Trigger: TGGGTCCAAACAGTACAGCCAGTCCGAGAGTCTTGA...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTGGTGTTTCTAACATATaGGGCGCCGAGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: PFTFTDEGTECQRVWGSAGVSNI*GAEWRL
Trigger: GAGTCTCCACTCGGCGCCCCATATGTTAGAAACACC...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTCCTCCGTCCTGGGGGTaGTGCAGTTTCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLAPPSWG*CSFHTW
Trigger: CCACGTGTGGAAACTGCACCACCCCCAGGACGGAGG...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCAGAATCCTTCGTGAGTaGAGGTATTCCAGACCCTCC +
Preference number: 4 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKIRILRE*RYSRPS
Trigger: GGAGGGTCTGGAATACCTCCACTCACGAAGGATTCT...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAATCACAGAGGGCTGCGTaGCTCCCATCGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWESQRAA*LPSLDR
Trigger: CCTGTCCAGCGATGGGAGCCACGCAGCCCTCTGTGA...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCTGGCGGTGGATGTCTTaGTTCTTTATATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SGAGAPERLSLLLSLALIWRWMS*FFIFSP
Trigger: AGGGGAGAATATAAAGAACCAAGACATCCACCGCCA...GATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCTTCGAGCCTCGGCCTaGCTGCTCCAGGAGTGTACG +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVLRASA*LLQECT
Trigger: CGTACACTCCTGGAGCAGCCAGGCCGAGGCTCGAAG...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTACCATTGAAATAGCTTaGGGTGTCGGTGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTTIEIA*GVGGPP
Trigger: GGGCGGCCCACCGACACCCCAAGCTATTTCAATGGT...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCCCCACTTTGACCCGGTaGAACTCCCGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVPTLTR*NSRMCR
Trigger: CCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGG...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCCTGTCTGCCAGCAAATaGTCACTGATCCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGLSASK*SLIQAG
Trigger: ACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAG...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCGCATACCTGCTGACCTaGTTCTGCACTGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGAYLLT*FCTEPE
Trigger: CTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGC...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACCTCCATGTCGTAGCGAACAGCTTACACACCTTCTTTaGTCCTTGGCTGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: VCTAGRCPSLAPPCRSEQLTHLL*SLAEPE
Trigger: CTCTGGTTCAGCCAAGGACCAAAGAAGGTGTGTAAG...CTGTTCGCTACGACATGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAGGGGAACCAGCACGCTaGACACTGATAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGGEPAR*TLIVGL
Trigger: CAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCCCC...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCACATTGTTGGGGATCTaGTCAAGACTCTCGGACTGG +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFTLLGI*SRLSDW
Trigger: CCAGTCCGAGAGTCTTGATCAGATCCCCAACAATGT...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACCAGCCGCACCTTTTTaGCAGCGCACTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEPAAPF*QRTGSQ
Trigger: CTGGCTTCCAGTGCGCTGTCAAAAAGGTGCGGCTGG...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCATGCAGAATCCTTCGTaGGTGGAGGTATTCCAGACC +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGMQNPS*VEVFQT
Trigger: GGTCTGGAATACCTCCACTCACGAAGGATTCTGCAT...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTGCACGTTGTCAGCTTTaGCGTCCCCATGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTARCQL*RPHAES
Trigger: GGATTCTGCATGGGGACGTCAAAGCTGACAACGTGC...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATGGCCCTCGGAAGAACTaGGTCCAGGGGTGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHGPRKN*VQGWQP
Trigger: CGGCTGCCACCCCTGGACTCAGTTCTTCCGAGGGCC...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CCATGCTTGACCCTCCAGCTCCAGGCGAAGCTGCCATCAGGGGCCAGTGTGCACTGTGTTGCAACAACCTaGAAAGTGTGGTGTATTCTA +
Preference number: 4 (lower is better)
Translates to: PCLTLQLQAKLPSGASVHCVATT*KVWCIL
Trigger: TAGAATACACCACACTTTTCAGGTTGTTGCAACACA...GTGCACACTGGCCCCTGATGGCAGCTTCGCCTGGAGCTGGAGGGTCAAGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTCTAGCAGACACCCCCTaGCGATTCACAGCTGATTTA +
Preference number: 4 (lower is better)
Translates to: PFTFTDEGTECQRVWGSALADTP*RFTADL
Trigger: TAAATCAGCTGTGAATCGTCAGGGGGTGTCTGCTAG...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGTCCCCGGGAGCAGTCTaGCTCAATGTGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRSPGAV*LNVDSW
Trigger: CCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGA...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACACGTGGTTCAGACATTaGAAGGGGCTGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: CSPLSASKWSLIQAGQANTWFRH*KGLISL
Trigger: CAAACTGATCAGCCCCTTGCAATGTCTGAACCACGT...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAGGCCTGAGCTCACGCTaGCTTGCAGAGCATGCACTA +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGGLSSR*LAEHAL
Trigger: TAGTGCATGCTCTGCAAGGCAGCGTGAGCTCAGGCC...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCGGTCAATCCTGCACATaGCATCAGCTCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVGQSCT*HQLLCP
Trigger: CGGGCAGAGGAGCTGATGGCATGTGCAGGATTGACC...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAATTCTATTTCCAGCTaGTGCAGTTCCTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGNSISS*CSSCSG
Trigger: CCCGGAGCAGGAACTGCAGCAGCTGGAAATAGAATT...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGGCACGAGAGAATTTaGTCCTGCTCCTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGRHERI*SCSSRE
Trigger: TTCTCTGGAGGAGCAGGAGCAAATTCTCTCGTGCCT...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTTGCACTGCAGGTCGATaGCCGAGTCTGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLACTAGR*PSLAPP
Trigger: TGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCA...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTTTCAGGGCAGCATCGTaGACCGAGCAGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLAFRAAS*TEQEGC
Trigger: GCAGCCTTCCTGCTCGGTGCACGATGCTGCCCTGAA...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAATCCTGGGAGGCATTCTaGTTGCCCCCACCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWESWEAF*LPPPCC
Trigger: GCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCAGGA...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTTGAGGTCATCAGAGTaGAAAGTGCCGTCGGCAGTA +
Preference number: 4 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSLRSSE*KVPSAV
Trigger: TACTGCCGACGGCACTTTGCACTCTGATGACCTCAA...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCTTGAGGTCATCAGAGTaGAAAGTGCCGTCGGCAGTA +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFLRSSE*KVPSAV
Trigger: TACTGCCGACGGCACTTTGCACTCTGATGACCTCAA...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCCTACAACCCAGACTCTaGAGTACCAAGGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFLQPRL*STKAAV
Trigger: AACTGCAGCCTTGGTACTGCAGAGTCTGGGTTGTAG...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCTTCTCACACTCAGCCTaGGCGATGATAGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFFSHSA*AMIEMA
Trigger: TGCCATCTCTATCATCGCCCAGGCTGAGTGTGAGAA...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCACAAAGGGACAATTCTaGGTGAGGTCAATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLTKGQF*VRSILH
Trigger: GTGCAGGATTGACCTCACCCAGAATTGTCCCTTTGT...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCCTCTGTCTCTTCACGTaGCGGAGTGTTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGLCLFT*RSVFSA
Trigger: TGCTGAGAAAACACTCCGCCACGTGAAGAGACAGAG...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATGTCGGCAGTACCCTCTaGCCAGGGGCAGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHVGSTL*PGAGQG
Trigger: ACCCTGCCCTGCCCCTGGCCAGAGGGTACTGCCGAC...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACGGAGTCACATGCATGTaGACAGCTCAAGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHGVTCM*TAQDCV
Trigger: GACACAGTCTTGAGCTGTCCACATGCATGTGACTCC...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCCAGGCGGAGGCTCGCTaGCAATCTGCCATGAACTTG +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVQAEAR*QSAMNL
Trigger: CAAGTTCATGGCAGATTGCCAGCGAGCCTCCGCCTG...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTCCCAGGCCATCAGGTTaGAGACACACAGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLAPRPSG*RHTAWP
Trigger: TGGCCATGCTGTGTGTCTTCAACCTGATGGCCTGGG...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGGGATGTAGTCCCCTGTaGGCAAGGACTTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRGCSPL*ARTFPG
Trigger: GCCTGGGAAAGTCCTTGCTCACAGGGGACTACATCC...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGAGGGGTGGCAGCCGTTaGGCATGTGCAGCATCATAC +
Preference number: 4 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRRGGSR*ACAASY
Trigger: GTATGATGCTGCACATGCTCAACGGCTGCCACCCCT...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp GCCTTTGATGGGTTCTTCTCACTGTCATCCGACAGGGAGAGGCTGTCGATGCTGGGACTTTCACACCATTaGAATAGCTTGGGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: AFDGFFSLSSDRERLSMLGLSHH*NSLGCR
Trigger: CCGACACCCCAAGCTATTTCAATGGTGTGAAAGTCC...CAGCATCGACAGCCTCTCCCTGTCGGATGACAGTGAGAAGAACCCATCAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGTGTGTTGCAACAACCTaGAAAGTGTGGTGTATTCTA +
Preference number: 4 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLCVATT*KVWCIL
Trigger: TAGAATACACCACACTTTTCAGGTTGTTGCAACACA...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTAGGGATGAGGCAGTCTaGTATAGGGGAAGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVRDEAV*YRGRGA
Trigger: CGCACCCCTTCCCCTATAGCAGACTGCCTCATCCCT...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAAGGTCAATCCTGCACATaGCATCAGCTCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEGQSCT*HQLLCP
Trigger: CGGGCAGAGGAGCTGATGGCATGTGCAGGATTGACC...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACCATGTGGGTCTCTGTaGCAGGGATGTAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEPCGSL*QGCSPL
Trigger: CAGGGGACTACATCCCTGGCACAGAGACCCACATGG...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTGCATCATACAGCAGCTaGTCCAGACATCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTASYSS*SRHPPW
Trigger: CCAAGGTGGATGTCTGGAGCAGCTGCTGTATGATGC...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTTCTCCTGGCTTGCTATaGTCCTACAGTGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTSPGLL*SYSVTA
Trigger: GGCAGTGACACTGTAGGAGCATAGCAAGCCAGGAGA...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTTCTTCTCCTTGGCTTTaGGGAGTTCCTTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTSSPWL*GVPSAA
Trigger: GGCAGCAGAAGGAACTCCCCAAAGCCAAGGAGAAGA...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTCATGGGCCACATTGTTaGGGATCTGATCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: PFTFTDEGTECQRVWGSAHGPHC*GSDQDS
Trigger: AGAGTCTTGATCAGATCCCCAACAATGTGGCCCATG...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACACCTTCTTTGGTCCTTaGCTGAACCAGAGGTCAACT +
Preference number: 4 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHTFFGP*LNQRST
Trigger: AGTTGACCTCTGGTTCAGCCAAGGACCAAAGAAGGT...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCATTCTTAGAGAAATCTaGAAGAGGTTTGAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGILREI*KRFEES
Trigger: TGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAAT...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GGCTCTTCAGACCTCCCACTTGCTGTAGTGCCCGGTTCACCTTCCCTCCCAGCTACCCCCAGATTTGGGTaGCAAGTATTTGAATTAGGA +
Preference number: 4 (lower is better)
Translates to: GSSDLPLAVVPGSPSLPATPRFG*QVFELG
Trigger: TCCTAATTCAAATACTTGCCACCCAAATCTGGGGGT...AGCTGGGAGGGAAGGTGAACCGGGCACTACAGCAAGTGGGAGGTCTGAAGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCAGAGGCTGTCGATGCTaGGGCACGAGAGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVRGCRC*GTREFA
Trigger: AGCAAATTCTCTCGTGCCTCAGCATCGACAGCCTCT...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAAGGCCCTCGCCAAGCTaGTTAAAACAGAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGRPSPS*LKQSCP
Trigger: TGGGCAACTCTGTTTTAAGCAGCTTGGCGAGGGCCT...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCGCTTTGACGTCCCCATaGAGAATCCTTCGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVALTSP*RILREW
Trigger: CCACTCACGAAGGATTCTGCATGGGGACGTCAAAGC...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGACAGCCGTTGAGCATGTaGAGCATCATACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGQPLSM*SIIQQL
Trigger: CAGCTGCTGTATGATGCTGCACATGCTCAACGGCTG...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACATCAGAGTGCAAAGTaGCGTCGGCAGTACCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEHQSAK*RRQYPL
Trigger: CAGAGGGTACTGCCGACGGCACTTTGCACTCTGATG...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTTCAAGACTCTCGGACTaGCTGTACTGTTTGGACCCA +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTSRLSD*LYCLDP
Trigger: TGGGTCCAAACAGTACAGCCAGTCCGAGAGTCTTGA...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCGGTGTTTCTAACATATaGGGCGCCGAGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVGVSNI*GAEWRL
Trigger: GAGTCTCCACTCGGCGCCCCATATGTTAGAAACACC...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTGGGTCTGGTGGTAATTaGCTTGATTTGGCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTGSGGN*LDLAVD
Trigger: ATCCACCGCCAAATCAAGCCAATTACCACCAGACCC...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGGCTAAGCTGGGGCAATaGGGAAGGGGGTGCTATTCT +
Preference number: 4 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRAKLGQ*GRGCYS
Trigger: AGAATAGCACCCCCTTCCCCATTGCCCCAGCTTAGC...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTCTCAATGTGGACAGCTaGACAAAGGCTGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTLNVDS*TKAVLA
Trigger: TGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAG...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACATTGTTGGGGATCTaGTCAAGACTCTCGGACTGG +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGTLLGI*SRLSDW
Trigger: CCAGTCCGAGAGTCTTGATCAGATCCCCAACAATGT...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATCCAGCCGCACCTTTTTaGCAGCGCACTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHPAAPF*QRTGSQ
Trigger: CTGGCTTCCAGTGCGCTGTCAAAAAGGTGCGGCTGG...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTGCATCATACAGCAGCTaGTCCAGACATCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVASYSS*SRHPPW
Trigger: CCAAGGTGGATGTCTGGAGCAGCTGCTGTATGATGC...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCAGCCGTTGAGCATGTaGAGCATCATACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVQPLSM*SIIQQL
Trigger: CAGCTGCTGTATGATGCTGCACATGCTCAACGGCTG...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACAGCCGTTGAGCATGTaGAGCATCATACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEQPLSM*SIIQQL
Trigger: CAGCTGCTGTATGATGCTGCACATGCTCAACGGCTG...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTTCCCAGACTCCTCCTTaGTCAAAGTCAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVSQTPP*SKSREE
Trigger: CTCCTCCCTTGACTTTGAGCAAGGAGGAGTCTGGGA...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATTTCAGGGCAGCATCGTaGACCGAGCAGGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHFRAAS*TEQEGC
Trigger: GCAGCCTTCCTGCTCGGTGCACGATGCTGCCCTGAA...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTCTGCTGACCTGGTTCTaGACTGAACCTGAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLALLTWF*TEPEFG
Trigger: CCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAG...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTTCTCCTGGCTTGCTATaGTCCTACAGTGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVSPGLL*SYSVTA
Trigger: GGCAGTGACACTGTAGGAGCATAGCAAGCCAGGAGA...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGTCTCCTGGCTTGCTATaGTCCTACAGTGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRSPGLL*SYSVTA
Trigger: GGCAGTGACACTGTAGGAGCATAGCAAGCCAGGAGA...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGACACCCCAAACTTTATTaGTTACAAAGAGTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRHPKLY*LQRVLY
Trigger: GTAGAGAACTCTTTGTAAGCAATAAAGTTTGGGGTG...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTGTGGGGCTGAACTCTTaGCTATTCTCACACTCAGCC +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVVGLNS*LFSHSA
Trigger: GGCTGAGTGTGAGAATAGCCAAGAGTTCAGCCCCAC...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGATGCAGTTTCCACACGTaGTTCAGACATTGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGCSFHT*FRHCKG
Trigger: CCCCTTGCAATGTCTGAACCACGTGTGGAAACTGCA...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACAGTTTGCTCAGGTGTaGGTCAGGCAAGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEQFAQV*VRQGFL
Trigger: CAGAAACCCTTGCCTGACCCACACCTGAGCAAACTG...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCGTACTCATAATCCACTaGCTTGAGTTTCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGVLIIH*LEFLSE
Trigger: CTCACTGAGAAACTCAAGCCAGTGGATTATGAGTAC...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGATTTTTGACAGCGCACTaGAAGCCAGTCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGFLTAH*KPVCLS
Trigger: GGACAAGCAGACTGGCTTCCAGTGCGCTGTCAAAAA...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGGTGAGCTGGGGTTTCTaGCAGGGGCTGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKVSWGF*QGLAPG
Trigger: CCCTGGAGCCAGCCCCTGCCAGAAACCCCAGCTCAC...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGTCAGGTGTGAAATCCTaGGAGGCATTCTGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRSGVKS*EAFCLP
Trigger: GGGCAAGCAGAATGCCTCCCAGGATTTCACACCTGA...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCCTCTGTCTCTTCACGTaGCGGAGTGTTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVLCLFT*RSVFSA
Trigger: TGCTGAGAAAACACTCCGCCACGTGAAGAGACAGAG...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCTGTCTGCCAGCAAATaGTCACTGATCCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVLSASK*SLIQAG
Trigger: ACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAG...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAGGAGTCACATGCATGTaGACAGCTCAAGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGGVTCM*TAQDCV
Trigger: GACACAGTCTTGAGCTGTCCACATGCATGTGACTCC...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCGGACAAAGGCTGTCTTaGCAAGATGTGGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVGQRLS*QDVGMS
Trigger: GCTCATTCCCACATCTTGCCAAGACAGCCTTTGTCC...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CAA 72 bp GCTGGGCATGGAGGGTCTGGTGGTAATTGGCTTGATTaGGCGGTGGATGTCTTGGTTCTTTATATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: AGHGGSGGNWLD*AVDVLVLYILP
Trigger: GGGGAGAATATAAAGAACCAAGACATCCACCGCCAAATCAAGCCAATTACCACCAGACCCTCCATGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATAAGGCCACTCCTGCATaGGCCAGGGACTTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHKATPA*ARDFEL
Trigger: GAGCTCAAAGTCCCTGGCTCATGCAGGAGTGGCCTT...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTGACATTGCAAGGGGCTaGTCAGTTTGTGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLADIARG*SVCGVL
Trigger: CAGAACTCCACAAACTGATCAGCCCCTTGCAATGTC...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR TCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTGCTTTGAGAGGCCTTTaGTGGGTTCTTCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVALRGL*WVLLTV
Trigger: GACAGTGAGAAGAACCCATCAAAGGCCTCTCAAAGC...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATTGTGATGCTGAGCTGTaGTCTGGGGAACCAGCACGC +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHCDAEL*SGEPAR
Trigger: GCGTGCTGGTTCCCCAGAGCACAGCTCAGCATCACA...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCTGCAGTACCAAGGCTaGAGTTCTTTATGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVLQYQG*SSLCAG
Trigger: CCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTTGCAGTTTCCACACGTaGTTCAGACATTGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLACSFHT*FRHCKG
Trigger: CCCCTTGCAATGTCTGAACCACGTGTGGAAACTGCA...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGGGCGGAGCTGGTGCGTaGCCCAGTGGACTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKGGAGA*PSGLLL
Trigger: GAGAAGAAGTCCACTGGGCCACGCACCAGCTCCGCC...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTCTCTGTCTCTTCACGTaGCGGAGTGTTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLALCLFT*RSVFSA
Trigger: TGCTGAGAAAACACTCCGCCACGTGAAGAGACAGAG...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCCTTACACACCTTCTTTaGTCCTTGGCTGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: YPASPFTFTDEGTECQRVLTHLL*SLAEPE
Trigger: CTCTGGTTCAGCCAAGGACCAAAGAAGGTGTGTAAG...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGGAGTGCCAGCGAGTCTaGGGCAGTGCTGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKECQRV*GSAGPE
Trigger: TTCAGGCCCAGCACTGCCCCAGACTCGCTGGCACTC...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CAA 72 bp CTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTaGGCTGAACCAGAGGTCAACTCAGGACCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LRTTSLTHLLWS*AEPEVNSGPVL
Trigger: CAACACAGGTCCTGAGTTGACCTCTGGTTCAGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CAA 72 bp TCTCGGCTGGGCATGGAGGGTCTGGTGGTAATTGGCTaGATTTGGCGGTGGATGTCTTGGTTCTTTATATTC +
Preference number: 4 (lower is better)
Translates to: SRLGMEGLVVIG*IWRWMSWFFIF
Trigger: GAATATAAAGAACCAAGACATCCACCGCCAAATCAAGCCAATTACCACCAGACCCTCCATGCCCAGCCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAAATGAGCCAGGGACTTTaGGCTCTTCTTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEMSQGL*ALLLPF
Trigger: AAACGGAAGAAGAAGAGCTCAAAGTCCCTGGCTCAT...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAATGGAACTCCCGGATGTaGAGGTGTTCACCATTAAGA +
Preference number: 4 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEWNSRM*RCSPLR
Trigger: TCTTAATGGTGAACACCTGCACATCCGGGAGTTCCA...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCCACCCCAAACTTTATTaGTTACAAAGAGTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFHPKLY*LQRVLY
Trigger: GTAGAGAACTCTTTGTAAGCAATAAAGTTTGGGGTG...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTCTGCCTGTTTATGTGTaGCTCTGCCACACATACTCA +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLALPVYV*LCHTYS
Trigger: TGAGTATGTGTGGCAGAGGCACACATAAACAGGCAG...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376926.8
CDS-3UTR CCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTCATGGGCCACATTGTTaGGGATCTGATCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLAHGPHC*GSDQDS
Trigger: AGAGTCTTGATCAGATCCCCAACAATGTGGCCCATG...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGTTGCTGCCCAGGTCTTaGCCAGGCTGGTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKLLPRS*PGWSGC
Trigger: ACAGCCTGACCAGCCTGGCCAAGACCTGGGCAGCAA...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTACCTTCTTTGGTCCTTaGCTGAACCAGAGGTCAACT +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLATFFGP*LNQRST
Trigger: AGTTGACCTCTGGTTCAGCCAAGGACCAAAGAAGGT...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATAGGGACAATTCTGGGTaGGGTCAATCCTGCACATGC +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHRDNSG*GQSCTC
Trigger: GCATGTGCAGGATTGACCTCACCCAGAATTGTCCCT...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTAGAGGCTTGGTGAACTaGGGGGTGTTTCTAACATAT +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVRGLVN*GVFLTY
Trigger: ATATGTTAGAAACACCCCGCAGTTCACCAAGCCTCT...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATAGGCCCTCGCCAAGCTaGTTAAAACAGAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHRPSPS*LKQSCP
Trigger: TGGGCAACTCTGTTTTAAGCAGCTTGGCGAGGGCCT...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR GCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATCTGCTCTCCCCTGTCTaGCAGCAAATGGTCACTGAT +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHLLSPV*QQMVTD
Trigger: ATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCAG...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTTGGCGGTGGATGTCTTaGTTCTTTATATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVWRWMS*FFIFSP
Trigger: AGGGGAGAATATAAAGAACCAAGACATCCACCGCCA...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATATGCAGAATCCTTCGTaGGTGGAGGTATTCCAGACC +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHMQNPS*VEVFQT
Trigger: GGTCTGGAATACCTCCACTCACGAAGGATTCTGCAT...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATCTAGCAGACACCCCCTaGCGATTCACAGCTGATTTA +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHLADTP*RFTADL
Trigger: TAAATCAGCTGTGAATCGTCAGGGGGTGTCTGCTAG...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTGTACTCATAATCCACTaGCTTGAGTTTCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLAVLIIH*LEFLSE
Trigger: CTCACTGAGAAACTCAAGCCAGTGGATTATGAGTAC...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATTTTTTGACAGCGCACTaGAAGCCAGTCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHFLTAH*KPVCLS
Trigger: GGACAAGCAGACTGGCTTCCAGTGCGCTGTCAAAAA...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CAA 72 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTaGAGGAGTCACATGCATGTGGACAGCTCAAGACTG +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRG*RSHMHVDSSRL
Trigger: CAGTCTTGAGCTGTCCACATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATGCCATGAAAGTGCTTTaGGGTCATCAGAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHAMKVL*GHQSAK
Trigger: CTTTGCACTCTGATGACCTCAAAGCACTTTCATGGC...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAATTCTTAGAGAAATCTaGAAGAGGTTTGAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGILREI*KRFEES
Trigger: TGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAAT...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
3UTR CAA 72 bp CCGGATGTGCAGGTGTTCACCATTAAGAGACTGTATTaGGACTTTCACACCATTGAAATAGCTTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PDVQVFTIKRLY*DFHTIEIAWGV
Trigger: GACACCCCAAGCTATTTCAATGGTGTGAAAGTCCAAATACAGTCTCTTAATGGTGAACACCTGCACATCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR TCA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGCACATGTCTGGGGACTaGGAACCACTTCACTTACAC +
Preference number: 4 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKHMSGD*EPLHLH
Trigger: GTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATGTG...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR GCA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGAGGCACGAGAGAATTTaGTCCTGCTCCTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKRHERI*SCSSRE
Trigger: TTCTCTGGAGGAGCAGGAGCAAATTCTCTCGTGCCT...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGCTCAATGTGGACAGCTaGACAAAGGCTGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKLNVDS*TKAVLA
Trigger: TGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAG...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CCA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGCTTACACACCTTCTTTaGTCCTTGGCTGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKLTHLL*SLAEPE
Trigger: CTCTGGTTCAGCCAAGGACCAAAGAAGGTGTGTAAG...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR TCA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGTGTGTTGCAACAACCTaGAAAGTGTGGTGTATTCTA +
Preference number: 4 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKCVATT*KVWCIL
Trigger: TAGAATACACCACACTTTTCAGGTTGTTGCAACACA...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGGGGCCCTGGGGCCCTaGGCGAAAGCTCTCTCGGCT +
Preference number: 5 (lower is better)
Translates to: GQHRAPSRKAASGSVEPAGALGP*AKALSA
Trigger: AGCCGAGAGAGCTTTCGCCAAGGGCCCCAGGGCCCC...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS GCA 90 bp TCAGCTGCCAGGCCGCCCCGGGGAGGAAGAGGAACAGGTGAGTCATaGCGGGTCCCAGCCCACCCTGGCTCGGTTTGGCCTGCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SAARPPRGGRGTGES*RVPAHPGSVWPALQ
Trigger: CTGGAGGGCAGGCCAAACCGAGCCAGGGTGGGCTGGGACCCGGCATGACTCACCTGTTCCTCTTCCTCCCCGGGGCGGCCTGGCAGCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS-3UTR CAA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGCCAACCAAGCGAGTGTaGCGCTCCGCTCGCCCGCGA +
Preference number: 5 (lower is better)
Translates to: GQHRAPSRKAASGSVEPAPTKRV*RSARPR
Trigger: TCGCGGGCGAGCGGAGCGCAACACTCGCTTGGTTGG...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344686.8
CDS-3UTR CAA 90 bp GCCCCCGGGCCAGCACCATGTTCCAGCTGGAGCTTCGAGCCTCGGCCTGGCTGCAGACAGCCCTGCTCCTaGACCAGCTGGCCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: APGPAPCSSWSFEPRPGCRQPCS*TSWPRE
Trigger: CTCCCTGGGCCAGCTGGTCAAGGAGCAGGGCTGTCT...GCAGCCAGGCCGAGGCTCGAAGCTCCAGCTGGAACATGGTGCTGGCCCGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS TCA 90 bp CACGTTGTCAGCTGCCAGGCCGCCCCGGGGAGGAAGAGGAACAGGTaGGTCATGCCGGGTCCCAGCCCACCCTGGCTCGGTTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: HVVSCQAAPGRKRNR*VMPGPSPPWLGLAC
Trigger: GCAGGCCAAACCGAGCCAGGGTGGGCTGGGACCCGGCATGACTCACCTGTTCCTCTTCCTCCCCGGGGCGGCCTGGCAGCTGACAACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS-3UTR CAA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGAGACAGCCCTGCTCCTaGACCAGCTGGCCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GQHRAPSRKAASGSVEPARQPCS*TSWPRE
Trigger: CTCCCTGGGCCAGCTGGTCAAGGAGCAGGGCTGTCT...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAGCGATGTCTCCCACTTaGACCCGGTGGAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGAMSPT*TRWNSR
Trigger: CCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGC...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGTCCAGCTGGCCATGCTaGACCCTCCAGCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: GQHRAPSRKAASGSVEPASSWPC*TLQLQA
Trigger: CGCCTGGAGCTGGAGGGTCAAGCATGGCCAGCTGGA...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS TCA 90 bp CCTGCAGCTCCCCCTGTTGGCCATGCTGGGTGCCGTCACCGACCTTaGGGCAGAGCGGCCCTCGGAAGAACTGAGTCCAGGGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: PAAPPVGHAGCRHRP*GRAALGRTESRGGS
Trigger: GCTGCCACCCCTGGACTCAGTTCTTCCGAGGGCCGCTCTGCCTCAAGGTCGGTGACGGCACCCAGCATGGCCAACAGGGGGAGCTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586644.2
ENST00000680632.1
CDS-3UTR CAA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGTCGTTGTCCTCAGTTTaGGGGCTGGGCTCCCGGGAT +
Preference number: 5 (lower is better)
Translates to: CEALVPLLSRGLADPWERSLSSV*GLGSRD
Trigger: ATCCCGGGAGCCCAGCCCCAAAACTGAGGACAACGA...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS GCA 90 bp GGGCAAAGGGACAGGAGCAGGGTTTACTCGGGAACGCTGCCACTCTaGTCGCCTGCGCCGACCCCATACCAGGGGTCACCAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GQRDRSRVYSGTLPL*SPAPTPYQGSPVGG
Trigger: CCCACCCACTGGTGACCCCTGGTATGGGGTCGGCGCAGGCGAGCAGAGTGGCAGCGTTCCCGAGTAAACCCTGCTCCTGTCCCTTTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS-3UTR CAA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGCAATCTGCCATGAACTaGGTGAGCCTCCGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: CEALVPLLSRGLADPWERQSAMN*VSLRSW
Trigger: CCAGCTGCGGAGGCTCACCAAGTTCATGGCAGATTG...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS GCA 90 bp GGACAGGAGCAGGGTTTACTCGGGAACGCTGCCACTCTGCTCGCCTaGGCCGACCCCATACCAGGGGTCACCAGTGGGTGGGAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: GQEQGLLGNAATLLA*ADPIPGVTSGWELD
Trigger: GTCAAGCTCCCACCCACTGGTGACCCCTGGTATGGGGTCGGCGCAGGCGAGCAGAGTGGCAGCGTTCCCGAGTAAACCCTGCTCCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS-3UTR CAA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGTCCCAGGCCATCAGGTaGAAGACACACAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: GQHRAPSRKAASGSVEPASQAIR*KTHSMA
Trigger: GGCCATGCTGTGTGTCTTCAACCTGATGGCCTGGGA...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GGCGATGTCTCCCACTTTGACCCGGTGGAACTCCCGGATGTGCAGGTGTTCACCGGGGCCCTGGGGCCCTaGGCGAAAGCTCTCTCGGCT +
Preference number: 5 (lower is better)
Translates to: GDVSHFDPVELPDVQVFTGALGP*AKALSA
Trigger: AGCCGAGAGAGCTTTCGCCAAGGGCCCCAGGGCCCC...GGTGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CAA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGTGGGAGGCATTCTGCTaGCCCCCACCTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: STLDTDSGAGAPERLSLLWEAFC*PPPCCC
Trigger: GCAGCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCA...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCCAGGTCAGCCTTGGGTaGGGGGAGAAAGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGQVSLG*GEKGRG
Trigger: GCCCCTGCCTTTCTCCCCCAACCCAAGGCTGACCTG...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376926.8
CDS CCA 90 bp AGCAAGACGCCCACAGCCTCCAGGCCCGGCCCGTTAGGAGGCAGGTaGATGGGGCCCAGGGTATGGACAGAAGAGAGTTCTCACCTGCCA +
Preference number: 5 (lower is better)
Translates to: SKTPTASRPGPLGGR*MGPRVWTEESSHLP
Trigger: TGGCAGGTGAGAACTCTCTTCTGTCCATACCCTGGGCCCCATCCACCTGCCTCCTAACGGGCCGGGCCTGGAGGCTGTGGGCGTCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586644.2
CDS-3UTR CAA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAAGCACGTTGTCAGCTTaGACGTCCCCATGCAGAATC +
Preference number: 5 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGSTLSA*TSPCRI
Trigger: GATTCTGCATGGGGACGTCAAAGCTGACAACGTGCT...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTGGCTGCTGATGCCAGTGGCGATGTCTCCCACTTTGACCCGGTGGAACTCCCGTCCAGCTGGCCATGCTaGACCCTCCAGCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: LAADASGDVSHFDPVELPSSWPC*TLQLQA
Trigger: CGCCTGGAGCTGGAGGGTCAAGCATGGCCAGCTGGA...CGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCCACTGGCATCAGCAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CAA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGACTGCTTGCCCCCACCTaGCTGCTGCGAGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRLLAPT*LLRGPG
Trigger: ACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCAG...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CCATGCTTGACCCTCCAGCTCCAGGCGAAGCTGCCATCAGGGGCCAGTGTGCACTGGGAGGCATTCTGCTaGCCCCCACCTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PCLTLQLQAKLPSGASVHWEAFC*PPPCCC
Trigger: GCAGCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCA...GTGCACACTGGCCCCTGATGGCAGCTTCGCCTGGAGCTGGAGGGTCAAGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CAA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGGCACTGAACCTGAGTTaGGGCCCTTACACACTTGAC +
Preference number: 5 (lower is better)
Translates to: CEALVPLLSRGLADPWERALNLS*GPYTLD
Trigger: GTCAAGTGTGTAAGGGCCCAAACTCAGGTTCAGTGC...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCCCCTGCCCCAGGAGGTaGAGGCTAGCAGACACCCCC +
Preference number: 5 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPPCPRR*RLADTP
Trigger: GGGGGTGTCTGCTAGCCTCAACCTCCTGGGGCAGGG...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGGGCCTGTTCTCCAGCTGGATCTCCCCTaGTACCCCCAGATTTGGGTG +
Preference number: 5 (lower is better)
Translates to: LLPAVWSRRWRAGLGPVLQLDLP*YPQIWV
Trigger: CACCCAAATCTGGGGGTACAAGGGGAGATCCAGCTG...GAGAACAGGCCCTAACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS GCA 90 bp TCATACAGCAGCTGCTCCAGACATCCACCTTGGCGTCGCAGCTCCTaGCCAGCACCACCTCCGGAGCCATGTGGGTCTCTGTGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: SYSSCSRHPPWRRSS*PAPPPEPCGSLCQG
Trigger: TCCCTGGCACAGAGACCCACATGGCTCCGGAGGTGGTGCTGGGCAGGAGCTGCGACGCCAAGGTGGATGTCTGGAGCAGCTGCTGTATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000586644.2
ENST00000592267.1
ENST00000617331.3
ENST00000680632.1
CDS GCA 90 bp ATCTCTGAGGGCAAAGGGACAGGAGCAGGGTTTACTCGGGAACGCTaGCACTCTGCTCGCCTGCGCCGACCCCATACCAGGGGTCACCAG +
Preference number: 5 (lower is better)
Translates to: ISEGKGTGAGFTRER*HSARLRRPHTRGHQ
Trigger: CTGGTGACCCCTGGTATGGGGTCGGCGCAGGCGAGCAGAGTGGCAGCGTTCCCGAGTAAACCCTGCTCCTGTCCCTTTGCCCTCAGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS-3UTR CAA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGAAGGGGCTGATCAGTTaGTGGAGTTCTGATCGAGGC +
Preference number: 5 (lower is better)
Translates to: GQHRAPSRKAASGSVEPAKGLIS*WSSDRG
Trigger: GCCTCGATCAGAACTCCACAAACTGATCAGCCCCTT...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGGTGGAGGGCAGGGTTAGCACGTTGTCAGCTTaGACGTCCCCATGCAGAATC +
Preference number: 5 (lower is better)
Translates to: PSRKAASGSVEPAVEGRVSTLSA*TSPCRI
Trigger: GATTCTGCATGGGGACGTCAAAGCTGACAACGTGCT...AACCCTGCCCTCCACCGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CAA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGACCTGCTCCGGGACGGTaGCTTTCCGCTCTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRPAPGR*LSALVS
Trigger: GCTCACCAGAGCGGAAAGCAACCGTCCCGGAGCAGG...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCCCTGCTCCGGGACGGTaGCTTTCCGCTCTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPPAPGR*LSALVS
Trigger: GCTCACCAGAGCGGAAAGCAACCGTCCCGGAGCAGG...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACCTGCTTGCCCCCACCTaGCTGCTGCGAGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: CSPLSASKWSLIQAGQANLLAPT*LLRGPG
Trigger: ACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCAG...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS TCA 90 bp CGCCTGCGCCGACCCCATACCAGGGGTCACCAGTGGGTGGGAGCTTaGCCTTCGGTTCTCTGTGGCCACCGTCTACCAGAAACTACAGTG +
Preference number: 5 (lower is better)
Translates to: RLRRPHTRGHQWVGA*PSVLCGHRLPETTV
Trigger: CACTGTAGTTTCTGGTAGACGGTGGCCACAGAGAACCGAAGGTCAAGCTCCCACCCACTGGTGACCCCTGGTATGGGGTCGGCGCAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS TCA 90 bp TGCCGGGTCCCAGCCCACCCTGGCTCGGTTTGGCCTGCCCTCCAGTaGTGTAATTTTCTGGCTGACCCTACGTGGCAGCTGCTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: CRVPAHPGSVWPALQ*CNFLADPTWQLLLL
Trigger: CAGAAGCAGCAGCTGCCACGTAGGGTCAGCCAGAAAATTACATCACTGGAGGGCAGGCCAAACCGAGCCAGGGTGGGCTGGGACCCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS TCA 90 bp TGGGTGCCGTCACCGACCTTGAGGCAGAGCGGCCCTCGGAAGAACTaGGTCCAGGGGTGGCAGCCGTTGAGCATGTGCAGCATCATACAG +
Preference number: 5 (lower is better)
Translates to: WVPSPTLRQSGPRKN*VQGWQPLSMCSIIQ
Trigger: CTGTATGATGCTGCACATGCTCAACGGCTGCCACCCCTGGACTCAGTTCTTCCGAGGGCCGCTCTGCCTCAAGGTCGGTGACGGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586644.2
ENST00000680632.1
CDS GCA 90 bp GGCAGAGCCGGCCGTAGGCCCTCGCCAAGCTGCTTAAAACAGAGTTaGCCAAGGCCTGGTTCCTTCAGAGGCTTGGTGAACTGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: GRAGRRPSPSCLKQS*PRPGSFRGLVNCGV
Trigger: CACCCCGCAGTTCACCAAGCCTCTGAAGGAACCAGGCCTTGGGCAACTCTGTTTTAAGCAGCTTGGCGAGGGCCTACGGCCGGCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS GCA 90 bp CAGGTGAGGCCTGCCTTCCCTCATTTCCTGATACCCGGCTGTTATTaGTCTTTGCGCAACTCCCGCCGGCCCCTGTTCCCGCTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: QVRPAFPHFLIPGCY*SLRNSRRPLFPLCW
Trigger: CCAGCACAGCGGGAACAGGGGCCGGCGGGAGTTGCGCAAAGAGCAATAACAGCCGGGTATCAGGAAATGAGGGAAGGCAGGCCTCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586644.2
CDS CCA 90 bp ACTCTGCTCGCCTGCGCCGACCCCATACCAGGGGTCACCAGTGGGTaGGAGCTTGACCTTCGGTTCTCTGTGGCCACCGTCTACCAGAAA +
Preference number: 5 (lower is better)
Translates to: TLLACADPIPGVTSG*ELDLRFSVATVYQK
Trigger: TTTCTGGTAGACGGTGGCCACAGAGAACCGAAGGTCAAGCTCCCACCCACTGGTGACCCCTGGTATGGGGTCGGCGCAGGCGAGCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS-3UTR CAA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGCACGTGGTTCAGACATaGCAAGGGGCTGATCAGTTT +
Preference number: 5 (lower is better)
Translates to: GQHRAPSRKAASGSVEPAHVVQT*QGADQF
Trigger: AAACTGATCAGCCCCTTGCAATGTCTGAACCACGTG...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCAGCAGGACACCCTCGTaGTCCTCAGTTTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGSRTPS*SSVLGL
Trigger: CAGCCCCAAAACTGAGGACAACGAGGGTGTCCTGCT...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCCTCCAGACATCCACCTaGGCGTCGCAGCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKILQTST*ASQLLP
Trigger: GGGCAGGAGCTGCGACGCCAAGGTGGATGTCTGGAG...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp TGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAACGGGGTAATTGGCTTGATTaGGCGGTGGATGTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: CEALVPLLSRGLADPWERGNWLD*AVDVLV
Trigger: AACCAAGACATCCACCGCCAAATCAAGCCAATTACC...CCGTTCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTAGGGAGGAGACTTGTTaGGCTCTGGGGGCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPREETC*ALGALV
Trigger: CACCAGAGCCCCCAGAGCCAAACAAGTCTCCTCCCT...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCCTGCTTGCCCCCACCTaGCTGCTGCGAGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFLLAPT*LLRGPG
Trigger: ACCAGGGCCTCGCAGCAGCAAGGTGGGGGCAAGCAG...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGTGGGCCCTTACACACTaGACACTCTCACAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: STLDTDSGAGAPERLSLLWALTH*TLSQQP
Trigger: AGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCA...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTCCCTGCCCCAGGAGGTaGAGGCTAGCAGACACCCCC +
Preference number: 5 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSPCPRR*RLADTP
Trigger: GGGGGTGTCTGCTAGCCTCAACCTCCTGGGGCAGGG...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS TCA 90 bp GGCAGAGCGGCCCTCGGAAGAACTGAGTCCAGGGGTGGCAGCCGTTaGGCATGTGCAGCATCATACAGCAGCTGCTCCAGACATCCACCT +
Preference number: 5 (lower is better)
Translates to: GRAALGRTESRGGSR*ACAASYSSCSRHPP
Trigger: AGGTGGATGTCTGGAGCAGCTGCTGTATGATGCTGCACATGCTCAACGGCTGCCACCCCTGGACTCAGTTCTTCCGAGGGCCGCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000586644.2
ENST00000592267.1
ENST00000617331.3
ENST00000680632.1
CDS TCA 90 bp GGAGGCTCGCTGGCAATCTTGAGGCAGAGCGGCCCTCGGAAGAACTaGGTCCAGGGGTGGCAGCCGTTGAGCATGTGCAGCATCATACAG +
Preference number: 5 (lower is better)
Translates to: GGSLAILRQSGPRKN*VQGWQPLSMCSIIQ
Trigger: CTGTATGATGCTGCACATGCTCAACGGCTGCCACCCCTGGACTCAGTTCTTCCGAGGGCCGCTCTGCCTCAAGATTGCCAGCGAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000592267.1
ENST00000617331.3
CDS-3UTR CAA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGACACACACGGGCCATTTaGCCCTCTGTAGCATGGGCC +
Preference number: 5 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRHTRAI*PSVAWA
Trigger: GGCCCATGCTACAGAGGGCAAAATGGCCCGTGTGTG...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCTCTACACAGGCCAGTTaGCCCAGGAAGGACTCCAGA +
Preference number: 5 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGSTQAS*PRKDSR
Trigger: TCTGGAGTCCTTCCTGGGCAAACTGGCCTGTGTAGA...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACAGACAGCCCTGCTCCTaGACCAGCTGGCCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHRQPCS*TSWPRE
Trigger: CTCCCTGGGCCAGCTGGTCAAGGAGCAGGGCTGTCT...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GGAACCAGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTAGCACGTTGTCAGCTTaGACGTCCCCATGCAGAATC +
Preference number: 5 (lower is better)
Translates to: GTSTLDTDSGAGAPERLSSTLSA*TSPCRI
Trigger: GATTCTGCATGGGGACGTCAAAGCTGACAACGTGCT...AGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCTGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCCTGGACAGGAGCACGTaGTCAGCTTTGACGTCCCCA +
Preference number: 5 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPLDRST*SALTSP
Trigger: TGGGGACGTCAAAGCTGACAACGTGCTCCTGTCCAG...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGCAGGGGTGGCAGCCGTaGAGCATGTGCAGCATCATA +
Preference number: 5 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLQGWQP*SMCSII
Trigger: TATGATGCTGCACATGCTCAACGGCTGCCACCCCTG...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GGGCAGCATCGTGCACCGAGCAGGAAGGCTGCTTCCGGCAGTGTGGAGCCGGCGAGCTTTGAGAGGCCTTaGATGGGTTCTTCTCACTGT +
Preference number: 5 (lower is better)
Translates to: GQHRAPSRKAASGSVEPASFERP*MGSSHC
Trigger: ACAGTGAGAAGAACCCATCAAAGGCCTCTCAAAGCT...CGCCGGCTCCACACTGCCGGAAGCAGCCTTCCTGCTCGGTGCACGATGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCTGGGCCCTTACACACTaGACACTCTCACAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGWALTH*TLSQQP
Trigger: AGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCA...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTGCTGCGAGGCCCTGGTCCCACTGCTGAGCCGGGGGCTGGCAGATCCCTGGGAAGCCATGAAAGTGCTTaGAGGTCATCAGAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: LLRGPGPTAEPGAGRSLGSHESA*RSSECK
Trigger: TTTGCACTCTGATGACCTCAAAGCACTTTCATGGCT...TCCCAGGGATCTGCCAGCCCCCGGCTCAGCAGTGGGACCAGGGCCTCGCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS CCA 90 bp CTCCACGGCCTCAAGCTTGTAGACGGAGCTCTGTTTCTTCCCCAGTaGCGGCGTCTTCTCCTTGGCTTTGGGGAGTTCCTTCTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LHGLKLVDGALFLPQ*RRLLLGFGEFLLLP
Trigger: GGGCAGCAGAAGGAACTCCCCAAAGCCAAGGAGAAGACGCCGCCACTGGGGAAGAAACAGAGCTCCGTCTACAAGCTTGAGGCCGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS-3UTR CAA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCTGCCATCTCCCAGGCTaGTGCTCATCCGGCCAAGCG +
Preference number: 5 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGCHLPG*CSSGQA
Trigger: CGCTTGGCCGGATGAGCACAAGCCTGGGAGATGGCA...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344686.8
CDS-3UTR CAA 90 bp AGCACGCTGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGGACTGGCTGTACTGTTaGGACCCAGCGATGAAAATG +
Preference number: 5 (lower is better)
Translates to: STLDTDSGAGAPERLSLLDWLYC*DPAMKM
Trigger: CATTTTCATCGCTGGGTCCAAACAGTACAGCCAGTC...CAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCAGCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATCTGGACAGGAGCACGTaGTCAGCTTTGACGTCCCCA +
Preference number: 5 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHLDRST*SALTSP
Trigger: TGGGGACGTCAAAGCTGACAACGTGCTCCTGTCCAG...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GTGTGCACTGCAGGTCGATGCCCGAGTCTGGCACCTCCATGTCGTAGCGAACAGACAGGCTGCCCGTCTTaGGTGACCAAGCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: VCTAGRCPSLAPPCRSEQTGCPS*VTKLKA
Trigger: AGCCTTCAGCTTGGTCACCAAAGACGGGCAGCCTGT...CTGTTCGCTACGACATGGAGGTGCCAGACTCGGGCATCGACCTGCAGTGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CAA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCTGGGAGGCATTCTGCTaGCCCCCACCTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGWEAFC*PPPCCC
Trigger: GCAGCAGCAAGGTGGGGGCAAGCAGAATGCCTCCCA...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCTGGGCCCTTACACACTaGACACTCTCACAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPWALTH*TLSQQP
Trigger: AGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCA...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS TCA 90 bp GGGGAGGGGTTTGGCCAAGGCCACTCCTGCATGAGCCAGGGACTTTaGGCTCTTCTTCTTCCGTTTCTTCCGGGCTTTGCTGCGACGCTT +
Preference number: 5 (lower is better)
Translates to: GEGFGQGHSCMSQGL*ALLLPFLPGFAATL
Trigger: AAGCGTCGCAGCAAAGCCCGGAAGAAACGGAAGAAGAAGAGCTCAAAGTCCCTGGCTCATGCAGGAGTGGCCTTGGCCAAACCCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS TCA 90 bp GGGGGTGGTGCAGTTTCCACACGTGGTTCAGACATTGCAAGGGGCTaGTCAGTTTGTGGAGTTCTGATCGAGGCAGAGCCGGCCGTAGGC +
Preference number: 5 (lower is better)
Translates to: GGGAVSTRGSDIARG*SVCGVLIEAEPAVG
Trigger: GCCTACGGCCGGCTCTGCCTCGATCAGAACTCCACAAACTGATCAGCCCCTTGCAATGTCTGAACCACGTGTGGAAACTGCACCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS GCA 90 bp TGGAGTTCTGATCGAGGCAGAGCCGGCCGTAGGCCCTCGCCAAGCTaGTTAAAACAGAGTTGCCCAAGGCCTGGTTCCTTCAGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: WSSDRGRAGRRPSPS*LKQSCPRPGSFRGL
Trigger: CAAGCCTCTGAAGGAACCAGGCCTTGGGCAACTCTGTTTTAAGCAGCTTGGCGAGGGCCTACGGCCGGCTCTGCCTCGATCAGAACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS GCA 90 bp GCAGGTGGATGGGGCCCAGGGTATGGACAGAAGAGAGTTCTCACCTaGCATGAACTTGGTGAGCCTCCGCAGCTGGATCTCCCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: AGGWGPGYGQKRVLT*HELGEPPQLDLPLY
Trigger: GTACAAGGGGAGATCCAGCTGCGGAGGCTCACCAAGTTCATGGCAGGTGAGAACTCTCTTCTGTCCATACCCTGGGCCCCATCCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586644.2
CDS-3UTR CAA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACGCCTCGGAGCCTTCCTaGGCTGTGCCCTTGGTAATC +
Preference number: 5 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHASEPS*AVPLVI
Trigger: GATTACCAAGGGCACAGCCAAGGAAGGCTCCGAGGC...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACTCGTTGTCCTCAGTTTaGGGGCTGGGCTCCCGGGAT +
Preference number: 5 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHSLSSV*GLGSRD
Trigger: ATCCCGGGAGCCCAGCCCCAAAACTGAGGACAACGA...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTCTCCAGACATCCACCTaGGCGTCGCAGCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTLQTST*ASQLLP
Trigger: GGGCAGGAGCTGCGACGCCAAGGTGGATGTCTGGAG...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAAGGGGCCCTGGGGCCCTaGGCGAAAGCTCTCTCGGCT +
Preference number: 5 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEGALGP*AKALSA
Trigger: AGCCGAGAGAGCTTTCGCCAAGGGCCCCAGGGCCCC...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTCCTGCTCCGGGACGGTaGCTTTCCGCTCTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTPAPGR*LSALVS
Trigger: GCTCACCAGAGCGGAAAGCAACCGTCCCGGAGCAGG...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACACAGGCTGCCCGTCTTaGGTGACCAAGCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: CSPLSASKWSLIQAGQANTGCPS*VTKLKA
Trigger: AGCCTTCAGCTTGGTCACCAAAGACGGGCAGCCTGT...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCGCACTGAACCTGAGTTaGGGCCCTTACACACTTGAC +
Preference number: 5 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPALNLS*GPYTLD
Trigger: GTCAAGTGTGTAAGGGCCCAAACTCAGGTTCAGTGC...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS GCA 90 bp CCTCCGTCCTGGGGGTGGTGCAGTTTCCACACGTGGTTCAGACATTaGAAGGGGCTGATCAGTTTGTGGAGTTCTGATCGAGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: PPSWGWCSFHTWFRH*KGLISLWSSDRGRA
Trigger: GGCTCTGCCTCGATCAGAACTCCACAAACTGATCAGCCCCTTGCAATGTCTGAACCACGTGTGGAAACTGCACCACCCCCAGGACGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CCA 90 bp AGTTTCCACACGTGGTTCAGACATTGCAAGGGGCTGATCAGTTTGTaGAGTTCTGATCGAGGCAGAGCCGGCCGTAGGCCCTCGCCAAGC +
Preference number: 5 (lower is better)
Translates to: SFHTWFRHCKGLISL*SSDRGRAGRRPSPS
Trigger: GCTTGGCGAGGGCCTACGGCCGGCTCTGCCTCGATCAGAACTCCACAAACTGATCAGCCCCTTGCAATGTCTGAACCACGTGTGGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CCA 90 bp TACCAGGGGTCACCAGTGGGTGGGAGCTTGACCTTCGGTTCTCTGTaGCCACCGTCTACCAGAAACTACAGTGCTTGGCTAAGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: YQGSPVGGSLTFGSL*PPSTRNYSAWLRGW
Trigger: CCAACCCCTTAGCCAAGCACTGTAGTTTCTGGTAGACGGTGGCCACAGAGAACCGAAGGTCAAGCTCCCACCCACTGGTGACCCCTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS-3UTR CAA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGATCCTTGGCTGTGCCCTaGGTAATCACGTCATTCAGG +
Preference number: 5 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRSLAVP*VITSFR
Trigger: CCTGAATGACGTGATTACCAAGGGCACAGCCAAGGA...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCGGTGGGGCTGAACTCTaGGCTATTCTCACACTCAGC +
Preference number: 5 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLGGAEL*AILTLS
Trigger: GCTGAGTGTGAGAATAGCCAAGAGTTCAGCCCCACC...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTCGTTTCTTCCGGGCTTaGCTGCGACGCTTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: PFTFTDEGTECQRVWGSARFFRA*LRRFPF
Trigger: GAAGGGAAAGCGTCGCAGCAAAGCCCGGAAGAAACG...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTCTGCTTAAAACAGAGTaGCCCAAGGCCTGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPLLKTE*PKAWFL
Trigger: AAGGAACCAGGCCTTGGGCAACTCTGTTTTAAGCAG...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCCACGTGGTTCAGACATaGCAAGGGGCTGATCAGTTT +
Preference number: 5 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPHVVQT*QGADQF
Trigger: AAACTGATCAGCCCCTTGCAATGTCTGAACCACGTG...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCAGCAGGACACCCTCGTaGTCCTCAGTTTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFSRTPS*SSVLGL
Trigger: CAGCCCCAAAACTGAGGACAACGAGGGTGTCCTGCT...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACTCCCAGGCCATCAGGTaGAAGACACACAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHSQAIR*KTHSMA
Trigger: GGCCATGCTGTGTGTCTTCAACCTGATGGCCTGGGA...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTCCCAGGCCATCAGGTaGAAGACACACAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSSQAIR*KTHSMA
Trigger: GGCCATGCTGTGTGTCTTCAACCTGATGGCCTGGGA...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGACTCCAGACATCCACCTaGGCGTCGCAGCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGLQTST*ASQLLP
Trigger: GGGCAGGAGCTGCGACGCCAAGGTGGATGTCTGGAG...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTGGCTCGCTGGCAATCTaGAGGCAGAGCGGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVGSLAI*RQSGPR
Trigger: CCGAGGGCCGCTCTGCCTCAAGATTGCCAGCGAGCC...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTGGCTCGCTGGCAATCTaGAGGCAGAGCGGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLAGSLAI*RQSGPR
Trigger: CCGAGGGCCGCTCTGCCTCAAGATTGCCAGCGAGCC...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp TGGACACTGATAGTGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTCTGGTGGTAATTGGCTaGATTTGGCGGTGGATGTCT +
Preference number: 5 (lower is better)
Translates to: WTLIVGLGRRSVSLCCFPLVVIG*IWRWMS
Trigger: AGACATCCACCGCCAAATCAAGCCAATTACCACCAG...AGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCACTATCAGTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACGAGGCACGAGAGAATTaGCTCCTGCTCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: CSPLSASKWSLIQAGQANEAREN*LLLLQR
Trigger: TCTCTGGAGGAGCAGGAGCAAATTCTCTCGTGCCTC...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCTGCAGCTCCCCCTGTaGGCCATGCTGGGTGCCGTC +
Preference number: 5 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVLQLPL*AMLGAV
Trigger: GACGGCACCCAGCATGGCCAACAGGGGGAGCTGCAG...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS TCA 90 bp GAAGGGAGGAGGGTATCAATTCAGGCTAGAGGTAGGCAGGATCTCTaGGGGCAAAGGGACAGGAGCAGGGTTTACTCGGGAACGCTGCCA +
Preference number: 5 (lower is better)
Translates to: EGRRVSIQARGRQDL*GQRDRSRVYSGTLP
Trigger: TGGCAGCGTTCCCGAGTAAACCCTGCTCCTGTCCCTTTGCCCTCAGAGATCCTGCCTACCTCTAGCCTGAATTGATACCCTCCTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS GCA 90 bp ATTCTCACACTCAGCCTGGGCGATGATAGAGATGGCAGCTGGCCCTaGCTCGGAGCCTTCCTTGGCTGTGCCCTTGGTAATCACGTCATT +
Preference number: 5 (lower is better)
Translates to: ILTLSLGDDRDGSWP*LGAFLGCALGNHVI
Trigger: AATGACGTGATTACCAAGGGCACAGCCAAGGAAGGCTCCGAGGCAGGGCCAGCTGCCATCTCTATCATCGCCCAGGCTGAGTGTGAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CCA 90 bp TGGTTCCTTCAGAGGCTTGGTGAACTGCGGGGTGTTTCTAACATATaGGGCGCCGAGTGGAGACTCATCCTCCTGCACTGGGATGGTGCA +
Preference number: 5 (lower is better)
Translates to: WFLQRLGELRGVSNI*GAEWRLILLHWDGA
Trigger: TGCACCATCCCAGTGCAGGAGGATGAGTCTCCACTCGGCGCCCCATATGTTAGAAACACCCCGCAGTTCACCAAGCCTCTGAAGGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS-3UTR CAA 90 bp GCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCGTCTTCTCCTTGGCTTaGGGGAGTTCCTTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ASPFTFTDEGTECQRVWGVFSLA*GSSFCC
Trigger: GCAGCAGAAGGAACTCCCCAAAGCCAAGGAGAAGAC...GCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACGGTGGGGCTGAACTCTaGGCTATTCTCACACTCAGC +
Preference number: 5 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHGGAEL*AILTLS
Trigger: GCTGAGTGTGAGAATAGCCAAGAGTTCAGCCCCACC...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp TGGGGCTGGGGCGCCGGAGCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGACTGGCTGTACTGTTaGGACCCAGCGATGAAAATG +
Preference number: 5 (lower is better)
Translates to: WGWGAGASLSAAFLSTDHDWLYC*DPAMKM
Trigger: CATTTTCATCGCTGGGTCCAAACAGTACAGCCAGTC...ATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGCTCCGGCGCCCCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CCCGAGGTAACTCCTGCCATCCTCCTCTGTCTCTTCACGTGGCGGAGTGTTTTCTCTACACAGGCCAGTTaGCCCAGGAAGGACTCCAGA +
Preference number: 5 (lower is better)
Translates to: PEVTPAILLCLFTWRSVFSTQAS*PRKDSR
Trigger: TCTGGAGTCCTTCCTGGGCAAACTGGCCTGTGTAGA...GAAAACACTCCGCCACGTGAAGAGACAGAGGAGGATGGCAGGAGTTACCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCAGCTCCATGAAGATGTaGACCCAAGGCCCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKISSMKM*TQGPSL
Trigger: GAGAGAAGGGCCTTGGGTCAACATCTTCATGGAGCT...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTCAGCTCCATGAAGATGTaGACCCAAGGCCCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LSPVCQQMVTDPSGSGQLSSMKM*TQGPSL
Trigger: GAGAGAAGGGCCTTGGGTCAACATCTTCATGGAGCT...GAGTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CAGGAGGGTGGGATCTCCCTCACAGGCGGAGGCTCGCTGGCAATCTGCCATGAAGGTAATTGGCTTGATTaGGCGGTGGATGTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: QEGGISLTGGGSLAICHEGNWLD*AVDVLV
Trigger: AACCAAGACATCCACCGCCAAATCAAGCCAATTACC...TTCATGGCAGATTGCCAGCGAGCCTCCGCCTGTGAGGGAGATCCCACCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CAA 90 bp CGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTTACACGAGGCACGAGAGAATTaGCTCCTGCTCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: RAYLLTWFCTEPEFGPLHEAREN*LLLLQR
Trigger: TCTCTGGAGGAGCAGGAGCAAATTCTCTCGTGCCTC...GTGTAAGGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp TACGGGCGGGCATACCTGCTGACCTGGTTCTGCACTGAACCTGAGTTTGGGCCCTGGACAAAGGCTGTCTaGGCAAGATGTGGGAATGAG +
Preference number: 5 (lower is better)
Translates to: YGRAYLLTWFCTEPEFGPWTKAV*ARCGNE
Trigger: CTCATTCCCACATCTTGCCAAGACAGCCTTTGTCCA...GGGCCCAAACTCAGGTTCAGTGCAGAACCAGGTCAGCAGGTATGCCCGCCCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GGCGATGTCTCCCACTTTGACCCGGTGGAACTCCCGGATGTGCAGGTGTTCACCTGGACAAAGGCTGTCTaGGCAAGATGTGGGAATGAG +
Preference number: 5 (lower is better)
Translates to: GDVSHFDPVELPDVQVFTWTKAV*ARCGNE
Trigger: CTCATTCCCACATCTTGCCAAGACAGCCTTTGTCCA...GGTGAACACCTGCACATCCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CAA 90 bp AGGTCATCAGAGTGCAAAGTGCCGTCGGCAGTACCCTCTGGCCAGGGGCAGGGCCTTGTACCCCCAGATTaGGGTGGCAAGTATTTGAAT +
Preference number: 5 (lower is better)
Translates to: RSSECKVPSAVPSGQGQGLVPPD*GGKYLN
Trigger: ATTCAAATACTTGCCACCCAAATCTGGGGGTACAAG...GCCCTGCCCCTGGCCAGAGGGTACTGCCGACGGCACTTTGCACTCTGATGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS TCA 90 bp CGGGCCATTTTGCCCTCTGTAGCATGGGCCACATTGTTGGGGATCTaGTCAAGACTCTCGGACTGGCTGTACTGTTTGGACCCAGCGATG +
Preference number: 5 (lower is better)
Translates to: RAILPSVAWATLLGI*SRLSDWLYCLDPAM
Trigger: CATCGCTGGGTCCAAACAGTACAGCCAGTCCGAGAGTCTTGATCAGATCCCCAACAATGTGGCCCATGCTACAGAGGGCAAAATGGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS GCA 90 bp CCAGGGACTTTGAGCTCTTCTTCTTCCGTTTCTTCCGGGCTTTGCTaGGACGCTTTCCCTTCCAACACACACGGGCCATTTTGCCCTCTG +
Preference number: 5 (lower is better)
Translates to: PGTLSSSSSVSSGLC*DAFPSNTHGPFCPL
Trigger: CAGAGGGCAAAATGGCCCGTGTGTGTTGGAAGGGAAAGCGTCGCAGCAAAGCCCGGAAGAAACGGAAGAAGAAGAGCTCAAAGTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS GCA 90 bp GAGCCAGGGACTTTGAGCTCTTCTTCTTCCGTTTCTTCCGGGCTTTaGTGCGACGCTTTCCCTTCCAACACACACGGGCCATTTTGCCCT +
Preference number: 5 (lower is better)
Translates to: EPGTLSSSSSVSSGL*CDAFPSNTHGPFCP
Trigger: AGGGCAAAATGGCCCGTGTGTGTTGGAAGGGAAAGCGTCGCAGCAAAGCCCGGAAGAAACGGAAGAAGAAGAGCTCAAAGTCCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CCA 90 bp GTGAGCCTCCGCAGCTGGATCTCCCCTTGTACCCCCAGATTTGGGTaGCAAGTATTTGAATTAGGATCCCACATGGATGACCAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VSLRSWISPCTPRFG*QVFELGSHMDDQAS
Trigger: GGAGGCCTGGTCATCCATGTGGGATCCTAATTCAAATACTTGCCACCCAAATCTGGGGGTACAAGGGGAGATCCAGCTGCGGAGGCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586644.2
ENST00000680632.1
CDS-3UTR CAA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCGCCTCGGAGCCTTCCTaGGCTGTGCCCTTGGTAATC +
Preference number: 5 (lower is better)
Translates to: YPASPFTFTDEGTECQRVASEPS*AVPLVI
Trigger: GATTACCAAGGGCACAGCCAAGGAAGGCTCCGAGGC...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp TTGGGCCCTTACACACTTGACACTCTCACAGCAGCCTGGAGGGTGAGGGGCCGATTGGCGGTGGATGTCTaGGTTCTTTATATTCTCCCC +
Preference number: 5 (lower is better)
Translates to: LGPYTLDTLTAAWRVRGRLAVDV*VLYILP
Trigger: GGGGAGAATATAAAGAACCAAGACATCCACCGCCAA...TCGGCCCCTCACCCTCCAGGCTGCTGTGAGAGTGTCAAGTGTGTAAGGGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTGCGATGTCTCCCACTTaGACCCGGTGGAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLAAMSPT*TRWNSR
Trigger: CCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGC...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAAGCGATGTCTCCCACTTaGACCCGGTGGAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEAMSPT*TRWNSR
Trigger: CCGGGAGTTCCACCGGGTCAAAGTGGGAGACATCGC...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GCAAGGGGTTTAGAGGGCCCCCTTAACCTACGGGCGGGCATACCTGCTGACCTGAAATCTGGAAGAGGTTaGAGGAGTCACATGCATGTG +
Preference number: 5 (lower is better)
Translates to: ARGLEGPLNLRAGIPADLKSGRG*RSHMHV
Trigger: CACATGCATGTGACTCCTCAAACCTCTTCCAGATTT...CAGGTCAGCAGGTATGCCCGCCCGTAGGTTAAGGGGGCCCTCTAAACCCCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTGCAGTACCAAGGCTGCAGTTCTTTATGTGCTGGGGGCCGGGGCTCTCTCCCCAAATCTGGAAGAGGTTaGAGGAGTCACATGCATGTG +
Preference number: 5 (lower is better)
Translates to: LQYQGCSSLCAGGRGSLPKSGRG*RSHMHV
Trigger: CACATGCATGTGACTCCTCAAACCTCTTCCAGATTT...GGGGAGAGAGCCCCGGCCCCCAGCACATAAAGAACTGCAGCCTTGGTACTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATGTGCCGTCACCGACCTaGAGGCAGAGCGGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHVPSPT*RQSGPR
Trigger: CCGAGGGCCGCTCTGCCTCAAGGTCGGTGACGGCAC...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680632.1
CDS-3UTR CAA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGCACACACGGGCCATTTaGCCCTCTGTAGCATGGGCC +
Preference number: 5 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRHTRAI*PSVAWA
Trigger: GGCCCATGCTACAGAGGGCAAAATGGCCCGTGTGTG...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTGGGGCAGTGCTCTGCTTAAAACAGAGTaGCCCAAGGCCTGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: PFTFTDEGTECQRVWGSALLKTE*PKAWFL
Trigger: AAGGAACCAGGCCTTGGGCAACTCTGTTTTAAGCAG...AGCACTGCCCCAGACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTCCAGCCGCACCTTTTaGACAGCGCACTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: YPASPFTFTDEGTECQRVSSRTF*TAHWKP
Trigger: TGGCTTCCAGTGCGCTGTCAAAAAGGTGCGGCTGGA...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGACAGGGGTGGCAGCCGTaGAGCATGTGCAGCATCATA +
Preference number: 5 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGQGWQP*SMCSII
Trigger: TATGATGCTGCACATGCTCAACGGCTGCCACCCCTG...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp TGCTCTCCCCTGTCTGCCAGCAAATGGTCACTGATCCAAGCGGGTCAGGCCAACTTGGCGGTGGATGTCTaGGTTCTTTATATTCTCCCC +
Preference number: 5 (lower is better)
Translates to: CSPLSASKWSLIQAGQANLAVDV*VLYILP
Trigger: GGGGAGAATATAAAGAACCAAGACATCCACCGCCAA...GTTGGCCTGACCCGCTTGGATCAGTGACCATTTGCTGGCAGACAGGGGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCGGTAATTGGCTTGATTaGGCGGTGGATGTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKIGNWLD*AVDVLV
Trigger: AACCAAGACATCCACCGCCAAATCAAGCCAATTACC...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTCTGGTGGTAATTGGCTaGATTTGGCGGTGGATGTCT +
Preference number: 5 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSLVVIG*IWRWMS
Trigger: AGACATCCACCGCCAAATCAAGCCAATTACCACCAG...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS TCA 90 bp CCAAGGCCCTTCTCTCACAGCTCCATACAAAGGGACAATTCTGGGTaGGGTCAATCCTGCACATGCCATCAGCTCCTCTGCCCGAAATAC +
Preference number: 5 (lower is better)
Translates to: PRPFSHSSIQRDNSG*GQSCTCHQLLCPKY
Trigger: GTATTTCGGGCAGAGGAGCTGATGGCATGTGCAGGATTGACCTCACCCAGAATTGTCCCTTTGTATGGAGCTGTGAGAGAAGGGCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
ENST00000680632.1
CDS-3UTR CAA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACGTTTCTTCCGGGCTTaGCTGCGACGCTTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWERFFRA*LRRFPF
Trigger: GAAGGGAAAGCGTCGCAGCAAAGCCCGGAAGAAACG...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp GCGTCTCTCTCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTTGGAAGCCAGTCTGCTaGTCCTCCATCCTGTGCACC +
Preference number: 5 (lower is better)
Translates to: ASLSAAFLSTDHVHPQTVWKPVC*SSILCT
Trigger: GGTGCACAGGATGGAGGACAAGCAGACTGGCTTCCA...AACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGAGAGAGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAATCCAGCCGCACCTTTTaGACAGCGCACTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWESSRTF*TAHWKP
Trigger: TGGCTTCCAGTGCGCTGTCAAAAAGGTGCGGCTGGA...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAACAGGGGTGGCAGCCGTaGAGCATGTGCAGCATCATA +
Preference number: 5 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEQGWQP*SMCSII
Trigger: TATGATGCTGCACATGCTCAACGGCTGCCACCCCTG...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATTCCAGCTGGCCATGCTaGACCCTCCAGCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHSSWPC*TLQLQA
Trigger: CGCCTGGAGCTGGAGGGTCAAGCATGGCCAGCTGGA...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTGCACTGAACCTGAGTTaGGGCCCTTACACACTTGAC +
Preference number: 5 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTALNLS*GPYTLD
Trigger: GTCAAGTGTGTAAGGGCCCAAACTCAGGTTCAGTGC...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp GTCACTGATCCAAGCGGGTCAGGCCAACTCGACTGGAGCAGGGCAGAGAAGATCAGCCATGAAAGTGCTTaGAGGTCATCAGAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: VTDPSGSGQLDWSRAEKISHESA*RSSECK
Trigger: TTTGCACTCTGATGACCTCAAAGCACTTTCATGGCT...GATCTTCTCTGCCCTGCTCCAGTCGAGTTGGCCTGACCCGCTTGGATCAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS TCA 90 bp CTCGGACTGGCTGTACTGTTTGGACCCAGCGATGAAAATGCGTTCTaGAAAGGTGGGGCTGAACTCTTGGCTATTCTCACACTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LGLAVLFGPSDENAF*KGGAELLAILTLSL
Trigger: CAGGCTGAGTGTGAGAATAGCCAAGAGTTCAGCCCCACCTTTTCAGAACGCATTTTCATCGCTGGGTCCAAACAGTACAGCCAGTCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CCA 90 bp AGAAGAGAGTTCTCACCTGCCATGAACTTGGTGAGCCTCCGCAGCTaGATCTCCCCTTGTACCCCCAGATTTGGGTGGCAAGTATTTGAA +
Preference number: 5 (lower is better)
Translates to: RREFSPAMNLVSLRS*ISPCTPRFGWQVFE
Trigger: TTCAAATACTTGCCACCCAAATCTGGGGGTACAAGGGGAGATCCAGCTGCGGAGGCTCACCAAGTTCATGGCAGGTGAGAACTCTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586644.2
CDS-3UTR CAA 90 bp TCTGCTGCTTTCCTTAGCACTGATCATGTCCATCCACAGACTGTTCCTGTCAGGGTCTTCTCCTTGGCTTaGGGGAGTTCCTTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SAAFLSTDHVHPQTVPVRVFSLA*GSSFCC
Trigger: GCAGCAGAAGGAACTCCCCAAAGCCAAGGAGAAGAC...CCTGACAGGAACAGTCTGTGGATGGACATGATCAGTGCTAAGGAAAGCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAAAGGGGCTGATCAGTTaGTGGAGTTCTGATCGAGGC +
Preference number: 5 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGKGLIS*WSSDRG
Trigger: GCCTCGATCAGAACTCCACAAACTGATCAGCCCCTT...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAAGAGGCACGAGAGAATTaGCTCCTGCTCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWEEAREN*LLLLQR
Trigger: TCTCTGGAGGAGCAGGAGCAAATTCTCTCGTGCCTC...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAATCCTTGGCTGTGCCCTaGGTAATCACGTCATTCAGG +
Preference number: 5 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWESLAVP*VITSFR
Trigger: CCTGAATGACGTGATTACCAAGGGCACAGCCAAGGA...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCCTGGTGGTAATTGGCTaGATTTGGCGGTGGATGTCT +
Preference number: 5 (lower is better)
Translates to: YPASPFTFTDEGTECQRVLVVIG*IWRWMS
Trigger: AGACATCCACCGCCAAATCAAGCCAATTACCACCAG...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGATGGACAAAGGCTGTCTaGGCAAGATGTGGGAATGAG +
Preference number: 5 (lower is better)
Translates to: QSDSMWTAGQRLSWQDVGWTKAV*ARCGNE
Trigger: CTCATTCCCACATCTTGCCAAGACAGCCTTTGTCCA...TCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATTCCAGCCGCACCTTTTaGACAGCGCACTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHSSRTF*TAHWKP
Trigger: TGGCTTCCAGTGCGCTGTCAAAAAGGTGCGGCTGGA...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCAGCTTTGAGAGGCCTTaGATGGGTTCTTCTCACTGT +
Preference number: 5 (lower is better)
Translates to: YPASPFTFTDEGTECQRVSFERP*MGSSHC
Trigger: ACAGTGAGAAGAACCCATCAAAGGCCTCTCAAAGCT...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AAGGGGGTGCTATTCTTAGAGAAATCTGGAAGAGGTTTGAGGAGTCACATGCATACAGGCTGCCCGTCTTaGGTGACCAAGCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: KGVLFLEKSGRGLRSHMHTGCPS*VTKLKA
Trigger: AGCCTTCAGCTTGGTCACCAAAGACGGGCAGCCTGT...ATGCATGTGACTCCTCAAACCTCTTCCAGATTTCTCTAAGAATAGCACCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGACTGTGTCCCTTCACCCCATCTCCTGGCTTGCTATGCTCCTACAGTGTCACTAAATCTGGAAGAGGTTaGAGGAGTCACATGCATGTG +
Preference number: 5 (lower is better)
Translates to: RLCPFTPSPGLLCSYSVTKSGRG*RSHMHV
Trigger: CACATGCATGTGACTCCTCAAACCTCTTCCAGATTT...AGTGACACTGTAGGAGCATAGCAAGCCAGGAGATGGGGTGAAGGGACACAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGGGCGGCGTCTTCTCCTaGGCTTTGGGGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKGGVFS*ALGSSF
Trigger: GAAGGAACTCCCCAAAGCCAAGGAGAAGACGCCGCC...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344686.8
ENST00000376926.8
CDS-3UTR CAA 90 bp CATGTCTGGGGACTGAGAACCACTTCACTTACACACCTTCTTTGGTCCTTGGCTTTGGCGGTGGATGTCTaGGTTCTTTATATTCTCCCC +
Preference number: 5 (lower is better)
Translates to: HVWGLRTTSLTHLLWSLALAVDV*VLYILP
Trigger: GGGGAGAATATAAAGAACCAAGACATCCACCGCCAA...AGCCAAGGACCAAAGAAGGTGTGTAAGTGAAGTGGTTCTCAGTCCCCAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGAGGGAGGAGACTTGTTaGGCTCTGGGGGCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKREETC*ALGALV
Trigger: CACCAGAGCCCCCAGAGCCAAACAAGTCTCCTCCCT...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CTCTCTCCCCGGGAGCAGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTCACCCCAAACTTTATaGCTTACAAAGAGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: LSPREQSDSMWTAGQRLSSPQTL*LTKSSL
Trigger: TAGAGAACTCTTTGTAAGCAATAAAGTTTGGGGTGA...AGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACTGCTCCCGGGGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGTGGAAGCCAGTCTGCTaGTCCTCCATCCTGTGCACC +
Preference number: 5 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKWKPVC*SSILCT
Trigger: GGTGCACAGGATGGAGGACAAGCAGACTGGCTTCCA...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGCTGGACAGGAGCACGTaGTCAGCTTTGACGTCCCCA +
Preference number: 5 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKLDRST*SALTSP
Trigger: TGGGGACGTCAAAGCTGACAACGTGCTCCTGTCCAG...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAAAGCCATGAAAGTGCTTaGAGGTCATCAGAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWESHESA*RSSECK
Trigger: TTTGCACTCTGATGACCTCAAAGCACTTTCATGGCT...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS TCA 90 bp AGTGATGTAATTTTCTGGCTGACCCTACGTGGCAGCTGCTGCTTCTaGTTAGTTTCATTAATCGTGGAGGAAGGGAGGAGGGTATCAATT +
Preference number: 5 (lower is better)
Translates to: SDVIFWLTLRGSCCF*LVSLIVEEGRRVSI
Trigger: AATTGATACCCTCCTCCCTTCCTCCACGATTAATGAAACTAATCAGAAGCAGCAGCTGCCACGTAGGGTCAGCCAGAAAATTACATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS-3UTR CAA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGAGCTCCATGAAGATGTaGACCCAAGGCCCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKSSMKM*TQGPSL
Trigger: GAGAGAAGGGCCTTGGGTCAACATCTTCATGGAGCT...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp TATCCTGCATCACCCTTCACCTTTACAGATGAGGGAACTGAGTGCCAGCGAGTCTCACCCCAAACTTTATaGCTTACAAAGAGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: YPASPFTFTDEGTECQRVSPQTL*LTKSSL
Trigger: TAGAGAACTCTTTGTAAGCAATAAAGTTTGGGGTGA...GACTCGCTGGCACTCAGTTCCCTCATCTGTAAAGGTGAAGGGTGATGCAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp AGTCTGACTCAATGTGGACAGCTGGACAAAGGCTGTCTTGGCAAGATGTGGGAATCACCCCAAACTTTATaGCTTACAAAGAGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: SLTQCGQLDKGCLGKMWESPQTL*LTKSSL
Trigger: TAGAGAACTCTTTGTAAGCAATAAAGTTTGGGGTGA...TTCCCACATCTTGCCAAGACAGCCTTTGTCCAGCTGTCCACATTGAGTCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS-3UTR CAA 90 bp CAAACTTTATTGCTTACAAAGAGTTCTCTACAACCCAGACTCTGCAGTACCAAGAGCTTTGAGAGGCCTTaGATGGGTTCTTCTCACTGT +
Preference number: 5 (lower is better)
Translates to: QTLLLTKSSLQPRLCSTKSFERP*MGSSHC
Trigger: ACAGTGAGAAGAACCCATCAAAGGCCTCTCAAAGCT...CTTGGTACTGCAGAGTCTGGGTTGTAGAGAACTCTTTGTAAGCAATAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000680632.1
CDS CAA 72 bp AGCGGCCAAGCGCCGATCTCCCCAACCAAGCGAGTGTaGCGCTCCGCTCGCCCGCGATCTCCCGCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: SGQAPISPTKRV*RSARPRSPAAG
Trigger: GCCGGCGGCGGGAGATCGCGGGCGAGCGGAGCGCAACACTCGCTTGGTTGGGGAGATCGGCGCTTGGCCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617331.3
CDS TCA 72 bp CCCCCTGTTGGCCATGCTGGGTGCCGTCACCGACCTTaGGGCAGAGCGGCCCTCGGAAGAACTGAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: PPVGHAGCRHRP*GRAALGRTESR
Trigger: CCTGGACTCAGTTCTTCCGAGGGCCGCTCTGCCTCAAGGTCGGTGACGGCACCCAGCATGGCCAACAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586644.2
ENST00000680632.1
CDS GCA 72 bp CAGGGTTTACTCGGGAACGCTGCCACTCTGCTCGCCTaGGCCGACCCCATACCAGGGGTCACCAGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: QGLLGNAATLLA*ADPIPGVTSGW
Trigger: CCACCCACTGGTGACCCCTGGTATGGGGTCGGCGCAGGCGAGCAGAGTGGCAGCGTTCCCGAGTAAACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS CCA 72 bp GCCTGCGCCGACCCCATACCAGGGGTCACCAGTGGGTaGGAGCTTGACCTTCGGTTCTCTGTGGCCACCGTC +
Preference number: 6 (lower is better)
Translates to: ACADPIPGVTSG*ELDLRFSVATV
Trigger: GACGGTGGCCACAGAGAACCGAAGGTCAAGCTCCCACCCACTGGTGACCCCTGGTATGGGGTCGGCGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS GCA 72 bp AGCTGCTCCAGACATCCACCTTGGCGTCGCAGCTCCTaGCCAGCACCACCTCCGGAGCCATGTGGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: SCSRHPPWRRSS*PAPPPEPCGSL
Trigger: CAGAGACCCACATGGCTCCGGAGGTGGTGCTGGGCAGGAGCTGCGACGCCAAGGTGGATGTCTGGAGCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000586644.2
ENST00000592267.1
ENST00000617331.3
ENST00000680632.1
CDS GCA 72 bp GACAGGAGCAGGGTTTACTCGGGAACGCTGCCACTCTaGTCGCCTGCGCCGACCCCATACCAGGGGTCACCA +
Preference number: 6 (lower is better)
Translates to: DRSRVYSGTLPL*SPAPTPYQGSP
Trigger: TGGTGACCCCTGGTATGGGGTCGGCGCAGGCGAGCAGAGTGGCAGCGTTCCCGAGTAAACCCTGCTCCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS GCA 72 bp GGCAAAGGGACAGGAGCAGGGTTTACTCGGGAACGCTaGCACTCTGCTCGCCTGCGCCGACCCCATACCAGG +
Preference number: 6 (lower is better)
Translates to: GKGTGAGFTRER*HSARLRRPHTR
Trigger: CCTGGTATGGGGTCGGCGCAGGCGAGCAGAGTGGCAGCGTTCCCGAGTAAACCCTGCTCCTGTCCCTTTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS CCA 72 bp CCCACAGCCTCCAGGCCCGGCCCGTTAGGAGGCAGGTaGATGGGGCCCAGGGTATGGACAGAAGAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: PTASRPGPLGGR*MGPRVWTEESS
Trigger: AGAACTCTCTTCTGTCCATACCCTGGGCCCCATCCACCTGCCTCCTAACGGGCCGGGCCTGGAGGCTGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586644.2
CDS CCA 72 bp GCAGCATCATACAGCAGCTGCTCCAGACATCCACCTTaGCGTCGCAGCTCCTGCCCAGCACCACCTCCGGAG +
Preference number: 6 (lower is better)
Translates to: AASYSSCSRHPP*RRSSCPAPPPE
Trigger: CTCCGGAGGTGGTGCTGGGCAGGAGCTGCGACGCCAAGGTGGATGTCTGGAGCAGCTGCTGTATGATGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000586644.2
ENST00000592267.1
ENST00000617331.3
ENST00000680632.1
CDS CAA 90 bp GGCTTGAGTTTCTCAGTGAGCAGGACACCCTCGTTGTCCTCAGTTTaGGGGCTGGGCTCCCGGGATCTGGAGCCCCTTGCTGCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: GLSFSVSRTPSLSSV*GLGSRDLEPLAAQV
Trigger: GACCTGGGCAGCAAGGGGCTCCAGATCCCGGGAGCCCAGCCCCAAAACTGAGGACAACGAGGGTGTCCTGCTCACTGAGAAACTCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS GCA 72 bp GAATTAGGATCCCACATGGATGACCAGGCCTCCCCTTaGTCCATCTGCCACCGCAGAGCAGCCCCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: ELGSHMDDQASP*SICHRRAAPPA
Trigger: GGCTGGAGGGGCTGCTCTGCGGTGGCAGATGGAGCAAGGGGAGGCCTGGTCATCCATGTGGGATCCTAATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586644.2
ENST00000680632.1
CDS CAA 72 bp TGCAGCATCATACAGCAGCTGCTCCAGACATCCACCTaGGCGTCGCAGCTCCTGCCCAGCACCACCTCCGGA +
Preference number: 6 (lower is better)
Translates to: CSIIQQLLQTST*ASQLLPSTTSG
Trigger: TCCGGAGGTGGTGCTGGGCAGGAGCTGCGACGCCAAGGTGGATGTCTGGAGCAGCTGCTGTATGATGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000586644.2
ENST00000592267.1
ENST00000617331.3
ENST00000680632.1
CDS CAA 90 bp TTGAGCATGTGCAGCATCATACAGCAGCTGCTCCAGACATCCACCTaGGCGTCGCAGCTCCTGCCCAGCACCACCTCCGGAGCCATGTGG +
Preference number: 6 (lower is better)
Translates to: LSMCSIIQQLLQTST*ASQLLPSTTSGAMW
Trigger: CCACATGGCTCCGGAGGTGGTGCTGGGCAGGAGCTGCGACGCCAAGGTGGATGTCTGGAGCAGCTGCTGTATGATGCTGCACATGCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000586644.2
ENST00000592267.1
ENST00000617331.3
ENST00000680632.1
CDS CAA 90 bp TCGCCTGCGCCGACCCCATACCAGGGGTCACCAGTGGGTGGGAGCTaGACCTTCGGTTCTCTGTGGCCACCGTCTACCAGAAACTACAGT +
Preference number: 6 (lower is better)
Translates to: SPAPTPYQGSPVGGS*TFGSLWPPSTRNYS
Trigger: ACTGTAGTTTCTGGTAGACGGTGGCCACAGAGAACCGAAGGTCAAGCTCCCACCCACTGGTGACCCCTGGTATGGGGTCGGCGCAGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS CAA 90 bp AGGCCTGCCTTCCCTCATTTCCTGATACCCGGCTGTTATTGCTCTTaGCGCAACTCCCGCCGGCCCCTGTTCCCGCTGTGCTGGGGTCTA +
Preference number: 6 (lower is better)
Translates to: RPAFPHFLIPGCYCS*RNSRRPLFPLCWGL
Trigger: TAGACCCCAGCACAGCGGGAACAGGGGCCGGCGGGAGTTGCGCAAAGAGCAATAACAGCCGGGTATCAGGAAATGAGGGAAGGCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586644.2
CDS CAA 90 bp ACAGGTGAGGCCTGCCTTCCCTCATTTCCTGATACCCGGCTGTTATaGCTCTTTGCGCAACTCCCGCCGGCCCCTGTTCCCGCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: TGEACLPSFPDTRLL*LFAQLPPAPVPAVL
Trigger: CAGCACAGCGGGAACAGGGGCCGGCGGGAGTTGCGCAAAGAGCAATAACAGCCGGGTATCAGGAAATGAGGGAAGGCAGGCCTCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586644.2
CDS GCA 72 bp GATCGAGGCAGAGCCGGCCGTAGGCCCTCGCCAAGCTaGTTAAAACAGAGTTGCCCAAGGCCTGGTTCCTTC +
Preference number: 6 (lower is better)
Translates to: DRGRAGRRPSPS*LKQSCPRPGSF
Trigger: GAAGGAACCAGGCCTTGGGCAACTCTGTTTTAAGCAGCTTGGCGAGGGCCTACGGCCGGCTCTGCCTCGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CCA 72 bp GTTTCTTCCCCAGTGGCGGCGTCTTCTCCTTGGCTTTaGGGAGTTCCTTCTGCTGCCCCACTGCTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: VSSPVAASSPWL*GVPSAAPLLSQ
Trigger: CTGGCTCAGCAGTGGGGCAGCAGAAGGAACTCCCCAAAGCCAAGGAGAAGACGCCGCCACTGGGGAAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CAA 72 bp TTCTCAGTGAGCAGGACACCCTCGTTGTCCTCAGTTTaGGGGCTGGGCTCCCGGGATCTGGAGCCCCTTGCT +
Preference number: 6 (lower is better)
Translates to: FSVSRTPSLSSV*GLGSRDLEPLA
Trigger: AGCAAGGGGCTCCAGATCCCGGGAGCCCAGCCCCAAAACTGAGGACAACGAGGGTGTCCTGCTCACTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CCA 72 bp GGGCCTCCGTCCTGGGGGTGGTGCAGTTTCCACACGTaGTTCAGACATTGCAAGGGGCTGATCAGTTTGTGG +
Preference number: 6 (lower is better)
Translates to: GPPSWGWCSFHT*FRHCKGLISLW
Trigger: CCACAAACTGATCAGCCCCTTGCAATGTCTGAACCACGTGTGGAAACTGCACCACCCCCAGGACGGAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CAA 72 bp TTCCCTCATTTCCTGATACCCGGCTGTTATTGCTCTTaGCGCAACTCCCGCCGGCCCCTGTTCCCGCTGTGC +
Preference number: 6 (lower is better)
Translates to: FPHFLIPGCYCS*RNSRRPLFPLC
Trigger: GCACAGCGGGAACAGGGGCCGGCGGGAGTTGCGCAAAGAGCAATAACAGCCGGGTATCAGGAAATGAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586644.2
CDS CAA 90 bp TGGGGAGGGGTTTGGCCAAGGCCACTCCTGCATGAGCCAGGGACTTaGAGCTCTTCTTCTTCCGTTTCTTCCGGGCTTTGCTGCGACGCT +
Preference number: 6 (lower is better)
Translates to: WGGVWPRPLLHEPGT*SSSSSVSSGLCCDA
Trigger: AGCGTCGCAGCAAAGCCCGGAAGAAACGGAAGAAGAAGAGCTCAAAGTCCCTGGCTCATGCAGGAGTGGCCTTGGCCAAACCCCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CAA 90 bp TGCAGTTTCCACACGTGGTTCAGACATTGCAAGGGGCTGATCAGTTaGTGGAGTTCTGATCGAGGCAGAGCCGGCCGTAGGCCCTCGCCA +
Preference number: 6 (lower is better)
Translates to: CSFHTWFRHCKGLIS*WSSDRGRAGRRPSP
Trigger: TGGCGAGGGCCTACGGCCGGCTCTGCCTCGATCAGAACTCCACAAACTGATCAGCCCCTTGCAATGTCTGAACCACGTGTGGAAACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS GCA 72 bp GGCCGTAGGCCCTCGCCAAGCTGCTTAAAACAGAGTTaGCCAAGGCCTGGTTCCTTCAGAGGCTTGGTGAAC +
Preference number: 6 (lower is better)
Translates to: GRRPSPSCLKQS*PRPGSFRGLVN
Trigger: GTTCACCAAGCCTCTGAAGGAACCAGGCCTTGGGCAACTCTGTTTTAAGCAGCTTGGCGAGGGCCTACGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS GCA 72 bp TGGGGCCCAGGGTATGGACAGAAGAGAGTTCTCACCTaGCATGAACTTGGTGAGCCTCCGCAGCTGGATCTC +
Preference number: 6 (lower is better)
Translates to: WGPGYGQKRVLT*HELGEPPQLDL
Trigger: GAGATCCAGCTGCGGAGGCTCACCAAGTTCATGGCAGGTGAGAACTCTCTTCTGTCCATACCCTGGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586644.2
CDS CCA 72 bp GAACTGCGGGGTGTTTCTAACATATGGGGCGCCGAGTaGAGACTCATCCTCCTGCACTGGGATGGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: ELRGVSNIWGAE*RLILLHWDGAA
Trigger: AGCTGCACCATCCCAGTGCAGGAGGATGAGTCTCCACTCGGCGCCCCATATGTTAGAAACACCCCGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CCA 72 bp CAGAGGCTTGGTGAACTGCGGGGTGTTTCTAACATATaGGGCGCCGAGTGGAGACTCATCCTCCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: QRLGELRGVSNI*GAEWRLILLHW
Trigger: CCAGTGCAGGAGGATGAGTCTCCACTCGGCGCCCCATATGTTAGAAACACCCCGCAGTTCACCAAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CAA 72 bp ACTGGCTTGAGTTTCTCAGTGAGCAGGACACCCTCGTaGTCCTCAGTTTTGGGGCTGGGCTCCCGGGATCTG +
Preference number: 6 (lower is better)
Translates to: TGLSFSVSRTPS*SSVLGLGSRDL
Trigger: CAGATCCCGGGAGCCCAGCCCCAAAACTGAGGACAACGAGGGTGTCCTGCTCACTGAGAAACTCAAGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CAA 90 bp AGGGATGTAGTCCCCTGTGAGCAAGGACTTTCCCAGGCCATCAGGTaGAAGACACACAGCATGGCCAAAGTCACAGAGGGCTGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: RDVVPCEQGLSQAIR*KTHSMAKVTEGCVA
Trigger: AGCCACGCAGCCCTCTGTGACTTTGGCCATGCTGTGTGTCTTCAACCTGATGGCCTGGGAAAGTCCTTGCTCACAGGGGACTACATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000586644.2
ENST00000592267.1
ENST00000617331.3
ENST00000680632.1
CDS CCA 72 bp TTCTCACCTGCCATGAACTTGGTGAGCCTCCGCAGCTaGATCTCCCCTTGTACCCCCAGATTTGGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: FSPAMNLVSLRS*ISPCTPRFGWQ
Trigger: TTGCCACCCAAATCTGGGGGTACAAGGGGAGATCCAGCTGCGGAGGCTCACCAAGTTCATGGCAGGTGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586644.2
CDS CAA 72 bp CACACGTGGTTCAGACATTGCAAGGGGCTGATCAGTTaGTGGAGTTCTGATCGAGGCAGAGCCGGCCGTAGG +
Preference number: 6 (lower is better)
Translates to: HTWFRHCKGLIS*WSSDRGRAGRR
Trigger: CCTACGGCCGGCTCTGCCTCGATCAGAACTCCACAAACTGATCAGCCCCTTGCAATGTCTGAACCACGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS TCA 72 bp TCCCCTGTGAGCAAGGACTTTCCCAGGCCATCAGGTTaGAGACACACAGCATGGCCAAAGTCACAGAGGGCT +
Preference number: 6 (lower is better)
Translates to: SPVSKDFPRPSG*RHTAWPKSQRA
Trigger: AGCCCTCTGTGACTTTGGCCATGCTGTGTGTCTTCAACCTGATGGCCTGGGAAAGTCCTTGCTCACAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000586644.2
ENST00000592267.1
ENST00000617331.3
ENST00000680632.1
CDS GCA 72 bp TGGGCCTGGCCTGAGCTCACGCTGCCTTGCAGAGCATaGACTAGGTATTCCTCCACAGAAAACTTCTCATGG +
Preference number: 6 (lower is better)
Translates to: WAWPELTLPCRA*TRYSSTENFSW
Trigger: CCATGAGAAGTTTTCTGTGGAGGAATACCTAGTGCATGCTCTGCAAGGCAGCGTGAGCTCAGGCCAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CCA 72 bp CTCGCCAAGCTGCTTAAAACAGAGTTGCCCAAGGCCTaGTTCCTTCAGAGGCTTGGTGAACTGCGGGGTGTT +
Preference number: 6 (lower is better)
Translates to: LAKLLKTELPKA*FLQRLGELRGV
Trigger: AACACCCCGCAGTTCACCAAGCCTCTGAAGGAACCAGGCCTTGGGCAACTCTGTTTTAAGCAGCTTGGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CCA 72 bp CGAAATACTTCCAGCCGCACCTTTTTGACAGCGCACTaGAAGCCAGTCTGCTTGTCCTCCATCCTGTGCACC +
Preference number: 6 (lower is better)
Translates to: RNTSSRTFLTAH*KPVCLSSILCT
Trigger: GGTGCACAGGATGGAGGACAAGCAGACTGGCTTCCAGTGCGCTGTCAAAAAGGTGCGGCTGGAAGTATTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
ENST00000680632.1
CDS CCA 72 bp TCACCAGTGGGTGGGAGCTTGACCTTCGGTTCTCTGTaGCCACCGTCTACCAGAAACTACAGTGCTTGGCTA +
Preference number: 6 (lower is better)
Translates to: SPVGGSLTFGSL*PPSTRNYSAWL
Trigger: TAGCCAAGCACTGTAGTTTCTGGTAGACGGTGGCCACAGAGAACCGAAGGTCAAGCTCCCACCCACTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS CAA 72 bp GGTATGGACAGAAGAGAGTTCTCACCTGCCATGAACTaGGTGAGCCTCCGCAGCTGGATCTCCCCTTGTACC +
Preference number: 6 (lower is better)
Translates to: GMDRREFSPAMN*VSLRSWISPCT
Trigger: GGTACAAGGGGAGATCCAGCTGCGGAGGCTCACCAAGTTCATGGCAGGTGAGAACTCTCTTCTGTCCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586644.2
CDS TCA 72 bp GCAGTTTCCACACGTGGTTCAGACATTGCAAGGGGCTaGTCAGTTTGTGGAGTTCTGATCGAGGCAGAGCCG +
Preference number: 6 (lower is better)
Translates to: AVSTRGSDIARG*SVCGVLIEAEP
Trigger: CGGCTCTGCCTCGATCAGAACTCCACAAACTGATCAGCCCCTTGCAATGTCTGAACCACGTGTGGAAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS TCA 72 bp AGGGTATCAATTCAGGCTAGAGGTAGGCAGGATCTCTaGGGGCAAAGGGACAGGAGCAGGGTTTACTCGGGA +
Preference number: 6 (lower is better)
Translates to: RVSIQARGRQDL*GQRDRSRVYSG
Trigger: TCCCGAGTAAACCCTGCTCCTGTCCCTTTGCCCTCAGAGATCCTGCCTACCTCTAGCCTGAATTGATACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592267.1
CDS GCA 72 bp AGCCTGAAGTCAAGTGCAGAGCTGCCACGCCAGGCCTaGTGGTTTCATTTTCATCTGAACCGAGCTCCACAT +
Preference number: 6 (lower is better)
Translates to: SLKSSAELPRQA*WFHFHLNRAPH
Trigger: ATGTGGAGCTCGGTTCAGATGAAAATGAAACCAGCAGGCCTGGCGTGGCAGCTCTGCACTTGACTTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617331.3
CDS CAA 72 bp AAACAGAGTTGCCCAAGGCCTGGTTCCTTCAGAGGCTaGGTGAACTGCGGGGTGTTTCTAACATATGGGGCG +
Preference number: 6 (lower is better)
Translates to: KQSCPRPGSFRG*VNCGVFLTYGA
Trigger: CGCCCCATATGTTAGAAACACCCCGCAGTTCACCAAGCCTCTGAAGGAACCAGGCCTTGGGCAACTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS GCA 72 bp TTGAGCTCTTCTTCTTCCGTTTCTTCCGGGCTTTGCTaGGACGCTTTCCCTTCCAACACACACGGGCCATTT +
Preference number: 6 (lower is better)
Translates to: LSSSSSVSSGLC*DAFPSNTHGPF
Trigger: AAATGGCCCGTGTGTGTTGGAAGGGAAAGCGTCGCAGCAAAGCCCGGAAGAAACGGAAGAAGAAGAGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS GCA 72 bp TGGGGGTGGTGCAGTTTCCACACGTGGTTCAGACATTaGAAGGGGCTGATCAGTTTGTGGAGTTCTGATCGA +
Preference number: 6 (lower is better)
Translates to: WGWCSFHTWFRH*KGLISLWSSDR
Trigger: TCGATCAGAACTCCACAAACTGATCAGCCCCTTGCAATGTCTGAACCACGTGTGGAAACTGCACCACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
CDS CCA 72 bp GCCCTTCTCTCACAGCTCCATACAAAGGGACAATTCTaGGTGAGGTCAATCCTGCACATGCCATCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: ALLSQLHTKGQF*VRSILHMPSAP
Trigger: AGGAGCTGATGGCATGTGCAGGATTGACCTCACCCAGAATTGTCCCTTTGTATGGAGCTGTGAGAGAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
ENST00000680632.1
CDS TCA 72 bp TTCTCTCACAGCTCCATACAAAGGGACAATTCTGGGTaGGGTCAATCCTGCACATGCCATCAGCTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: FSHSSIQRDNSG*GQSCTCHQLLC
Trigger: GCAGAGGAGCTGATGGCATGTGCAGGATTGACCTCACCCAGAATTGTCCCTTTGTATGGAGCTGTGAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344686.8
ENST00000376926.8
ENST00000617331.3
ENST00000680632.1
CDS GCA 72 bp AGGGGCAAAGGGTCTCTGCCTGTTTATGTGTGCCTCTaGCACACATACTCATCCTCCAAACATCCTCAATGG +
Preference number: 6 (lower is better)
Translates to: RGKGSLPVYVCL*HTYSSSKHPQW
Trigger: CCATTGAGGATGTTTGGAGGATGAGTATGTGTGGCAGAGGCACACATAAACAGGCAGAGACCCTTTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376926.8
CDS CCA 72 bp CGCAGCTGGATCTCCCCTTGTACCCCCAGATTTGGGTaGCAAGTATTTGAATTAGGATCCCACATGGATGAC +
Preference number: 6 (lower is better)
Translates to: RSWISPCTPRFG*QVFELGSHMDD
Trigger: GTCATCCATGTGGGATCCTAATTCAAATACTTGCCACCCAAATCTGGGGGTACAAGGGGAGATCCAGCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586644.2
ENST00000680632.1