RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP3K13 (Homo sapiens)

Ensembl gene IDs: ENSG00000073803

Ensembl transcript IDs: ENST00000265026.8, ENST00000420577.1, ENST00000424227.5, ENST00000428617.1, ENST00000433092.5, ENST00000438053.5, ENST00000439882.1, ENST00000443863.5, ENST00000446828.5, ENST00000447637.1, ENST00000448876.5, ENST00000455188.5, ENST00000477582.1

Found 982 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTAGGGCCGGGAGCCAGCGATCCCTGAGTGCTGTGAAGTGGCTCTaGAGAGCAGACCTGGGATGCTGCCGGGAGCTTCCTTACAGTGGC +
Preference number: 1 (lower is better)
Translates to: PRAGSQRSLSAVKWL*RADLGCCRELPYSG
Trigger: GCCACTGTAAGGAAGCTCCCGGCAGCATCCCAGGTCTGCTCTCCAGAGCCACTTCACAGCACTCAGGGATCGCTGGCTCCCGGCCCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 90 bp GTCAGGGCTCGAGCCGGGCAGCTGTCTCTGAGCATGGTTGCTGAGTaGGCTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTT +
Preference number: 1 (lower is better)
Translates to: VRARAGQLSLSMVAE*APQGCCWAEIPQVV
Trigger: AACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGCCCACTCAGCAACCATGCTCAGAGACAGCTGCCCGGCTCGAGCCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR GCA 90 bp GACCTGGGATGCTGCCGGGAGCTTCCTTACAGTGGCCTTGCCATCTaGTTAGGGCTCTGCTCTGTGAAGTCCTGCCATCGTACCCTGGCC +
Preference number: 1 (lower is better)
Translates to: DLGCCRELPYSGLAI*LGLCSVKSCHRTLA
Trigger: GGCCAGGGTACGATGGCAGGACTTCACAGAGCAGAGCCCTAAGCAGATGGCAAGGCCACTGTAAGGAAGCTCCCGGCAGCATCCCAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 90 bp GTGGGTAGAGGCAAGTGGCCTTTCCCCTTTCTGTGGTACCGCCCCTaGCAGCCACAGGTGGACACTAGTGCGAGCCTGTCGTTCTGCCAT +
Preference number: 1 (lower is better)
Translates to: VGRGKWPFPFLWYRP*QPQVDTSASLSFCH
Trigger: ATGGCAGAACGACAGGCTCGCACTAGTGTCCACCTGTGGCTGTCAGGGGCGGTACCACAGAAAGGGGAAAGGCCACTTGCCTCTACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 90 bp CAGCTGTCTCTGAGCATGGTTGCTGAGTGGGCTCCGCAGGGCTGCTaGTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCTATGTC +
Preference number: 1 (lower is better)
Translates to: QLSLSMVAEWAPQGC*WAEIPQVVGAGCYV
Trigger: GACATAGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGCCCACTCAGCAACCATGCTCAGAGACAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR GCA 90 bp CACTCTTCTGCAGAGGCCTTGTTTTTCGAGGTAGCGCTGGAGGGGTaGCGAGATGAGAGGTGCCGAGGGATGACTCAGACCTACAGCCGC +
Preference number: 1 (lower is better)
Translates to: HSSAEALFFEVALEG*RDERCRGMTQTYSR
Trigger: GCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAACAAGGCCTCTGCAGAAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 90 bp GCTCTGGAGAGCAGACCTGGGATGCTGCCGGGAGCTTCCTTACAGTaGCCTTGCCATCTGCTTAGGGCTCTGCTCTGTGAAGTCCTGCCA +
Preference number: 1 (lower is better)
Translates to: ALESRPGMLPGASLQ*PCHLLRALLCEVLP
Trigger: TGGCAGGACTTCACAGAGCAGAGCCCTAAGCAGATGGCAAGGCCACTGTAAGGAAGCTCCCGGCAGCATCCCAGGTCTGCTCTCCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 90 bp CTGTCTCTGAGCATGGTTGCTGAGTGGGCTCCGCAGGGCTGCTGCTaGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCTATGTCCTG +
Preference number: 1 (lower is better)
Translates to: LSLSMVAEWAPQGCC*AEIPQVVGAGCYVL
Trigger: CAGGACATAGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGCCCACTCAGCAACCATGCTCAGAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 90 bp GCGCAGGTTGCTATGTCCTGTCCGTGCATATTGAGTCTGGGATGGTaGCTCTGGGACATGGCAGGAGGGGGCTGCTGGTATTGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: AQVAMSCPCILSLGW*LWDMAGGGCWYCCC
Trigger: GCAGCAGCAATACCAGCAGCCCCCTCCTGCCATGTCCCAGAGTCACCATCCCAGACTCAATATGCACGGACAGGACATAGCAACCTGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 90 bp CACACGGCGCACGGCACACTCCTTGTCAGAGAGCCCATCCGAGTGTaGGGATATGTCAATGGGAATCTCTGGCGTCTGGGACAGCAGGTC +
Preference number: 1 (lower is better)
Translates to: HTAHGTLLVREPIRV*GYVNGNLWRLGQQV
Trigger: GACCTGCTGTCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTCGGATGGGCTCTCTGACAAGGAGTGTGCCGTGCGCCGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR GCA 90 bp GAGAGCAGACCTGGGATGCTGCCGGGAGCTTCCTTACAGTGGCCTTaGCATCTGCTTAGGGCTCTGCTCTGTGAAGTCCTGCCATCGTAC +
Preference number: 1 (lower is better)
Translates to: ESRPGMLPGASLQWP*HLLRALLCEVLPSY
Trigger: GTACGATGGCAGGACTTCACAGAGCAGAGCCCTAAGCAGATGGCAAGGCCACTGTAAGGAAGCTCCCGGCAGCATCCCAGGTCTGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 90 bp CATCTTCCTAATAGCTTGCACATGCTGGCTGGGGTTCCCTTGGCCTaGAGTCACTGGAGGACCCTGTCCACCTGGTCACTGGACAGCAGC +
Preference number: 1 (lower is better)
Translates to: HLPNSLHMLAGVPLA*SHWRTLSTWSLDSS
Trigger: GCTGCTGTCCAGTGACCAGGTGGACAGGGTCCTCCAGTGACTGCAGGCCAAGGGAACCCCAGCCAGCATGTGCAAGCTATTAGGAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 90 bp CTGGCTCAGCAGAGGGTATGTCTAAGGACCCATACTGTTCTGGCCTaGACTGAAGGCAGGGGTCATAAGCGTCAGCCTGGCAACAGCCCC +
Preference number: 1 (lower is better)
Translates to: LAQQRVCLRTHTVLA*TEGRGHKRQPGNSP
Trigger: GGGGCTGTTGCCAGGCTGACGCTTATGACCCCTGCCTTCAGTGCAGGCCAGAACAGTATGGGTCCTTAGACATACCCTCTGCTGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 90 bp TGCAGAGGCCTTGTTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATaGGAGGTGCCGAGGGATGACTCAGACCTACAGCCGCTGAATTCA +
Preference number: 1 (lower is better)
Translates to: CRGLVFRGSAGGVPR*EVPRDDSDLQPLNS
Trigger: TGAATTCAGCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAACAAGGCCTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 90 bp TGGGACATCTTCCTAATAGCTTGCACATGCTGGCTGGGGTTCCCTTaGCCTGCAGTCACTGGAGGACCCTGTCCACCTGGTCACTGGACA +
Preference number: 1 (lower is better)
Translates to: WDIFLIACTCWLGFP*PAVTGGPCPPGHWT
Trigger: TGTCCAGTGACCAGGTGGACAGGGTCCTCCAGTGACTGCAGGCCAAGGGAACCCCAGCCAGCATGTGCAAGCTATTAGGAAGATGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 90 bp GCCACTGGGGTGATATGGGCAAGATGGGACATCTTCCTAATAGCTTaGACATGCTGGCTGGGGTTCCCTTGGCCTGCAGTCACTGGAGGA +
Preference number: 1 (lower is better)
Translates to: ATGVIWARWDIFLIA*TCWLGFPWPAVTGG
Trigger: TCCTCCAGTGACTGCAGGCCAAGGGAACCCCAGCCAGCATGTGCAAGCTATTAGGAAGATGTCCCATCTTGCCCATATCACCCCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 90 bp CAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTaGTATGTCCTGTCCGTGCATATTGAGTCTGGGATGGTGACTCTG +
Preference number: 1 (lower is better)
Translates to: QGCCWAEIPQVVGAG*YVLSVHIESGMVTL
Trigger: CAGAGTCACCATCCCAGACTCAATATGCACGGACAGGACATAGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR GCA 90 bp CAAACTGCATGGGGTTCTCATAGCCACGTTCCTCCACACACAGCTTaGCCAGAGACATCTGAGTCTTCACACGGCGCACGGCACACTCCT +
Preference number: 1 (lower is better)
Translates to: QTAWGSHSHVPPHTA*PETSESSHGARHTP
Trigger: AGGAGTGTGCCGTGCGCCGTGTGAAGACTCAGATGTCTCTGGGCAAGCTGTGTGTGGAGGAACGTGGCTATGAGAACCCCATGCAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 90 bp TGGGACTTCCGGACAAAGGGGATGCAGTGGGAGCCACTTCTGTGGTaGGGATCCCTTCTGATCTCAACAAGTCTGGCCGTTTGGTCTGCA +
Preference number: 1 (lower is better)
Translates to: WDFRTKGMQWEPLLW*GSLLISTSLAVWSA
Trigger: TGCAGACCAAACGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACCACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGAAGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR GCA 90 bp CCTGGGCTGGCTGGTTTTTCAAGATTGCGGCAAAGTCACTATGGCTaGCTCTGCTATTCCCTCGGCGGTGGCGTGGTTTGCTTCGATATC +
Preference number: 1 (lower is better)
Translates to: PGLAGFSRLRQSHYG*LCYSLGGGVVCFDI
Trigger: GATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTGCCGCAATCTTGAAAAACCAGCCAGCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 90 bp GTGATATGGGCAAGATGGGACATCTTCCTAATAGCTTGCACATGCTaGCTGGGGTTCCCTTGGCCTGCAGTCACTGGAGGACCCTGTCCA +
Preference number: 1 (lower is better)
Translates to: VIWARWDIFLIACTC*LGFPWPAVTGGPCP
Trigger: TGGACAGGGTCCTCCAGTGACTGCAGGCCAAGGGAACCCCAGCCAGCATGTGCAAGCTATTAGGAAGATGTCCCATCTTGCCCATATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 90 bp ATTGCGGCAAAGTCACTATGGCTGCCTCTGCTATTCCCTCGGCGGTaGCGTGGTTTGCTTCGATATCGGCTCTTGCTGCTAGAAGTGGAC +
Preference number: 1 (lower is better)
Translates to: IAAKSLWLPLLFPRR*RGLLRYRLLLLEVD
Trigger: GTCCACTTCTAGCAGCAAGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTGCCGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 90 bp TTTCTCAGAACTCTGGGCGTTTTCCAAGAGAGGATTATGTGCTGGTaGCTTGGAAAGGTCAGGGCTCCTCCCCACTGGCTCAGCAGAGGG +
Preference number: 1 (lower is better)
Translates to: FLRTLGVFQERIMCW*LGKVRAPPHWLSRG
Trigger: CCCTCTGCTGAGCCAGTGGGGAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAATCCTCTCTTGGAAAACGCCCAGAGTTCTGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR GCA 90 bp CTGGCTGGTTTTTCAAGATTGCGGCAAAGTCACTATGGCTGCCTCTaGTATTCCCTCGGCGGTGGCGTGGTTTGCTTCGATATCGGCTCT +
Preference number: 1 (lower is better)
Translates to: LAGFSRLRQSHYGCL*YSLGGGVVCFDIGS
Trigger: AGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTGCCGCAATCTTGAAAAACCAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 90 bp TTTTCCTGGGCTGGCTGGTTTTTCAAGATTGCGGCAAAGTCACTATaGCTGCCTCTGCTATTCCCTCGGCGGTGGCGTGGTTTGCTTCGA +
Preference number: 1 (lower is better)
Translates to: FSWAGWFFKIAAKSL*LPLLFPRRWRGLLR
Trigger: TCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTGCCGCAATCTTGAAAAACCAGCCAGCCCAGGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 90 bp AGCCCATCCGAGTGTGAGGATATGTCAATGGGAATCTCTGGCGTCTaGGACAGCAGGTCGTCTAGCTTCTCTGCCAAGCGGTCTTCAAGT +
Preference number: 1 (lower is better)
Translates to: SPSECEDMSMGISGV*DSRSSSFSAKRSSS
Trigger: ACTTGAAGACCGCTTGGCAGAGAAGCTAGACGACCTGCTGTCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTCGGATGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 90 bp CACACTCCTTGTCAGAGAGCCCATCCGAGTGTGAGGATATGTCAATaGGAATCTCTGGCGTCTGGGACAGCAGGTCGTCTAGCTTCTCTG +
Preference number: 1 (lower is better)
Translates to: HTPCQRAHPSVRICQ*ESLASGTAGRLASL
Trigger: CAGAGAAGCTAGACGACCTGCTGTCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTCGGATGGGCTCTCTGACAAGGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 90 bp GGCAAAGTCACTATGGCTGCCTCTGCTATTCCCTCGGCGGTGGCGTaGTTTGCTTCGATATCGGCTCTTGCTGCTAGAAGTGGACATTTT +
Preference number: 1 (lower is better)
Translates to: GKVTMAASAIPSAVA*FASISALAARSGHF
Trigger: AAAATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 90 bp TTAGGGCTCTGCTCTGTGAAGTCCTGCCATCGTACCCTGGCCACATaGCAGTTAACAAAAGCCTTAACCCACCTCCTGTTTCTCAGAGCA +
Preference number: 1 (lower is better)
Translates to: LGLCSVKSCHRTLAT*QLTKALTHLLFLRA
Trigger: TGCTCTGAGAAACAGGAGGTGGGTTAAGGCTTTTGTTAACTGTCATGTGGCCAGGGTACGATGGCAGGACTTCACAGAGCAGAGCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 90 bp TTCCACTTGCAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTaGTCTTCCTGCCAGCTCGTAAGACCTCGTAGAGTTGTCCATGGG +
Preference number: 1 (lower is better)
Translates to: FHLQFLWTSLLAIEV*SSCQLVRPRRVVHG
Trigger: CCCATGGACAACTCTACGAGGTCTTACGAGCTGGCAGGAAGATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR CCA 90 bp ACTTCCAGAGTCTGGGAAGTGGTCACTCTGAAGGTGAAGAGCCACTaGGGTGATATGGGCAAGATGGGACATCTTCCTAATAGCTTGCAC +
Preference number: 1 (lower is better)
Translates to: TSRVWEVVTLKVKSH*GDMGKMGHLPNSLH
Trigger: GTGCAAGCTATTAGGAAGATGTCCCATCTTGCCCATATCACCCCAGTGGCTCTTCACCTTCAGAGTGACCACTTCCCAGACTCTGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 90 bp TCCTGGCTGTTTCTGGATCAGGTTCACACTGATACACATTTACAGTaGCCTTGGAAGCTACCAACCAACACAGCGAGGTGGGAGGGTTTG +
Preference number: 1 (lower is better)
Translates to: SWLFLDQVHTDTHLQ*PWKLPTNTARWEGL
Trigger: CAAACCCTCCCACCTCGCTGTGTTGGTTGGTAGCTTCCAAGGCCACTGTAAATGTGTATCAGTGTGAACCTGATCCAGAAACAGCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
3UTR GCA 90 bp GCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATaGCAGTATAGTCACGAGATCTTCAGGATGTGTATTCCTTCATTA +
Preference number: 1 (lower is better)
Translates to: AGREWDESGGGVDLK*QYSHEIFRMCIPSL
Trigger: TAATGAAGGAATACACATCCTGAAGATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCACTCTCTCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 90 bp CTGTTTCTGGATCAGGTTCACACTGATACACATTTACAGTGGCCTTaGAAGCTACCAACCAACACAGCGAGGTGGGAGGGTTTGTTACTC +
Preference number: 1 (lower is better)
Translates to: LFLDQVHTDTHLQWP*KLPTNTARWEGLLL
Trigger: GAGTAACAAACCCTCCCACCTCGCTGTGTTGGTTGGTAGCTTCCAAGGCCACTGTAAATGTGTATCAGTGTGAACCTGATCCAGAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
3UTR TCA 90 bp AAGGGGTCTGGCAGGAAGGAGATTGCAAACTATGTTGTCAATTCTTaGAACGAATCCATGAGCCCTGTGCGGAAACCCTCTAGGTCTGTT +
Preference number: 1 (lower is better)
Translates to: KGSGRKEIANYVVNS*NESMSPVRKPSRSV
Trigger: AACAGACCTAGAGGGTTTCCGCACAGGGCTCATGGATTCGTTTCAAGAATTGACAACATAGTTTGCAATCTCCTTCCTGCCAGACCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 90 bp CTGATAACCGAGACAGTCGATCTGATCACCGAGACTGCTACTAAGTaGCTAATGGATGAGCAGCATGAATATGCTGGACAGAGGGAGGAT +
Preference number: 1 (lower is better)
Translates to: LITETVDLITETATK*LMDEQHEYAGQRED
Trigger: ATCCTCCCTCTGTCCAGCATATTCATGCTGCTCATCCATTAGTCACTTAGTAGCAGTCTCGGTGATCAGATCGACTGTCTCGGTTATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 90 bp ATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATaGCATCTTGGTACTTTTGTCACTGAGTTCCTTAGATGTACCAAA +
Preference number: 1 (lower is better)
Translates to: IPYHLWRHPCDRASK*HLGTFVTEFLRCTK
Trigger: TTTGGTACATCTAAGGAACTCAGTGACAAAAGTACCAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
3UTR TCA 90 bp TCTGATCTCAACAAGTCTGGCCGTTTGGTCTGCATCCCAGATTTGTaGGGCACTCCTTTCCTTTTCATGAGTTTCTCCATGGCATTGGGA +
Preference number: 1 (lower is better)
Translates to: SDLNKSGRLVCIPDL*GTPFLFMSFSMALG
Trigger: TCCCAATGCCATGGAGAAACTCATGAAAAGGAAAGGAGTGCCTCACAAATCTGGGATGCAGACCAAACGGCCAGACTTGTTGAGATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 90 bp ATCAATATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTaGTTCCATCTTCTCCTCGTAGCTGAACTGAGTGATCCTGAGAAT +
Preference number: 1 (lower is better)
Translates to: INMTQVDKQPGSREG*FHLLLVAELSDPEN
Trigger: ATTCTCAGGATCACTCAGTTCAGCTACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 90 bp CCATCAGACACAGAGAAATTCTCAGAGCTAAAGGTTGAATATGACTaGCAGCTGCTGATACAGCGATGGGGCCTCTGTCTTCGTGGAAAT +
Preference number: 1 (lower is better)
Translates to: PSDTEKFSELKVEYD*QLLIQRWGLCLRGN
Trigger: ATTTCCACGAAGACAGAGGCCCCATCGCTGTATCAGCAGCTGCCAGTCATATTCAACCTTTAGCTCTGAGAATTTCTCTGTGTCTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 90 bp GGAAGGAGATTGCAAACTATGTTGTCAATTCTTGAAACGAATCCATaGGCCCTGTGCGGAAACCCTCTAGGTCTGTTCCTCTCAGGACAT +
Preference number: 1 (lower is better)
Translates to: GRRLQTMLSILETNP*ALCGNPLGLFLSGH
Trigger: ATGTCCTGAGAGGAACAGACCTAGAGGGTTTCCGCACAGGGCTCATGGATTCGTTTCAAGAATTGACAACATAGTTTGCAATCTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 90 bp AGACACACATACATCCTAGCTGCCTTCAAAGTCTGTTCTCCTGCTTaGATCAATATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAG +
Preference number: 1 (lower is better)
Translates to: RHTYILAAFKVCSPA*INMTQVDKQPGSRE
Trigger: CTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATATTGATTCAAGCAGGAGAACAGACTTTGAAGGCAGCTAGGATGTATGTGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 90 bp TGTTTAGTAGCACCTGGTAGGAAGTTTCCCAACTTACCTGAGACTTaGAGTAAGTTTCTTGTGGGGTGGCAAGTACATCTGCAGAGGCAA +
Preference number: 1 (lower is better)
Translates to: CLVAPGRKFPNLPET*SKFLVGWQVHLQRQ
Trigger: TTGCCTCTGCAGATGTACTTGCCACCCCACAAGAAACTTACTTCAAGTCTCAGGTAAGTTGGGAAACTTCCTACCAGGTGCTACTAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR TCA 90 bp GTAGTGTTTATTGGTCCTAACTGTGGCATCAGAACACTCCCCATCTaGAGAGTCACAGTCCGATTCTTCAAACTGCATGGGGTTCTCATA +
Preference number: 1 (lower is better)
Translates to: VVFIGPNCGIRTLPI*RVTVRFFKLHGVLI
Trigger: TATGAGAACCCCATGCAGTTTGAAGAATCGGACTGTGACTCTTCAGATGGGGAGTGTTCTGATGCCACAGTTAGGACCAATAAACACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 90 bp CACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTaGGCTTCAGGGCAGAACATGCGTCCTCAGATGATTGTTGTACAC +
Preference number: 1 (lower is better)
Translates to: HPGAFMIKSKSQCIH*ASGQNMRPQMIVVH
Trigger: GTGTACAACAATCATCTGAGGACGCATGTTCTGCCCTGAAGCCCAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 90 bp CCAACCTTTGTTCCTACAGGAAGTGGTCAGCAGGCAGAAAGGAAATaGGCTACAAGGAAATGGCACTTGAGTATGAAAGATCAACACGTT +
Preference number: 1 (lower is better)
Translates to: PTFVPTGSGQQAERK*ATRKWHLSMKDQHV
Trigger: AACGTGTTGATCTTTCATACTCAAGTGCCATTTCCTTGTAGCTCATTTCCTTTCTGCCTGCTGACCACTTCCTGTAGGAACAAAGGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 90 bp TCAAAAAGGATGCATTTATTCTTAAAGGATGCCAATGTTCCACAGTaGGAGAGGGCATTTAAAATAGTCTGGAGGCTGGGCATGGCAGCT +
Preference number: 1 (lower is better)
Translates to: SKRMHLFLKDANVPQ*ERAFKIVWRLGMAA
Trigger: AGCTGCCATGCCCAGCCTCCAGACTATTTTAAATGCCCTCTCCCACTGTGGAACATTGGCATCCTTTAAGAATAAATGCATCCTTTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 90 bp GTAGAGTTGTCCATGGGCACAGTATTCCATGATAATACAATAACATaGGGCCTGAGTACAAACACCCTTGAATGCGATGATGTTAGGGTG +
Preference number: 1 (lower is better)
Translates to: VELSMGTVFHDNTIT*GLSTNTLECDDVRV
Trigger: CACCCTAACATCATCGCATTCAAGGGTGTTTGTACTCAGGCCCCATGTTATTGTATTATCATGGAATACTGTGCCCATGGACAACTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR GCA 90 bp GGCAGGACCTCATGCTTTTGGCAATGTAAAAATCCTTCCTATCCCTaGTCAGCATCCCTTGTTCTTTCCACAAATGTTCAAATCCAGTTA +
Preference number: 1 (lower is better)
Translates to: GRTSCFWQCKNPSYP*SASLVLSTNVQIQL
Trigger: TAACTGGATTTGAACATTTGTGGAAAGAACAAGGGATGCTGAGCAGGGATAGGAAGGATTTTTACATTGCCAAAAGCATGAGGTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 90 bp AGAGGGAGGATCACCTCCAGGGCAGCAAGGGGCAAGATCTCATCATaGTCCTCAGAATGCTGTGCAATTAAAATTTATGAATTGTTTATT +
Preference number: 1 (lower is better)
Translates to: RGRITSRAARGKISS*SSECCAIKIYELFI
Trigger: AATAAACAATTCATAAATTTTAATTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGGTGATCCTCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 90 bp AGTTTACAGCTTTTTAACTATATGTCCATCCACTATTTGACATCCTaGGGGTCATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAA +
Preference number: 1 (lower is better)
Translates to: SLQLFNYMSIHYLTS*GSSAHPGAFMIKSK
Trigger: TTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGATGACCCCCAGGATGTCAAATAGTGGATGGACATATAGTTAAAAAGCTGTAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 90 bp AAGCGGTCTTCAAGTTTATCAGCTAACTCATCAGGACTGTTTGAGTaGTCACTGGTATTTCCCTCTTCTCCATCAGACACAGAGAAATTC +
Preference number: 1 (lower is better)
Translates to: KRSSSLSANSSGLFE*SLVFPSSPSDTEKF
Trigger: GAATTTCTCTGTGTCTGATGGAGAAGAGGGAAATACCAGTGACCACTCAAACAGTCCTGATGAGTTAGCTGATAAACTTGAAGACCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR GCA 90 bp CGGCAACATTTTCATGTGCATTGGAAATGGTTTAACAGCTGTCTGTaGAAGTATTTCCTAACGTCCAACATGATGCAGTGTCAAAGAGTC +
Preference number: 1 (lower is better)
Translates to: RQHFHVHWKWFNSCL*KYFLTSNMMQCQRV
Trigger: GACTCTTTGACACTGCATCATGTTGGACGTTAGGAAATACTTGCACAGACAGCTGTTAAACCATTTCCAATGCACATGAAAATGTTGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 90 bp AAGAGTCCAGTGAATCTAGAGAGGTTGTTTGACGGTAATCTGTCTTaGAGACAGGGACAGGTACTAGGTCAACACCTATTTGTACATAAA +
Preference number: 1 (lower is better)
Translates to: KSPVNLERLFDGNLS*RQGQVLGQHLFVHK
Trigger: TTTATGTACAAATAGGTGTTGACCTAGTACCTGTCCCTGTCTCCAAGACAGATTACCGTCAAACAACCTCTCTAGATTCACTGGACTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 90 bp ACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCACATTGTTTTaGTACATGAGTCTCACAGAGTCTAAGAAGCAAGTAACTGGGACT +
Preference number: 1 (lower is better)
Translates to: TDRTSQSLEKNVTLF*YMSLTESKKQVTGT
Trigger: AGTCCCAGTTACTTGCTTCTTAGACTCTGTGAGACTCATGTACCAAAACAATGTGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 90 bp ATTTGCCAAGGTAATGACAGTGACAGCACTAAAAAGGGACGTATTTaGCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAAC +
Preference number: 1 (lower is better)
Translates to: ICQGNDSDSTKKGRI*QKQDLTLSVNLTTN
Trigger: GTTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCCTTTTTAGTGCTGTCACTGTCATTACCTTGGCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 90 bp GTTCAATATGGACTTTATTCAACTCTCGACTATACAATGAATGACTaGGATTCAGCCACTACGTACTACCCTAACATACTCATAACAGTT +
Preference number: 1 (lower is better)
Translates to: VQYGLYSTLDYTMND*DSATTYYPNILITV
Trigger: AACTGTTATGAGTATGTTAGGGTAGTACGTAGTGGCTGAATCTCAGTCATTCATTGTATAGTCGAGAGTTGAATAAAGTCCATATTGAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 90 bp AAAAATGTGTTCAATATGGACTTTATTCAACTCTCGACTATACAATaGATGACTGAGATTCAGCCACTACGTACTACCCTAACATACTCA +
Preference number: 1 (lower is better)
Translates to: KNVFNMDFIQLSTIQ*MTEIQPLRTTLTYS
Trigger: TGAGTATGTTAGGGTAGTACGTAGTGGCTGAATCTCAGTCATTCATTGTATAGTCGAGAGTTGAATAAAGTCCATATTGAACACATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR TCA 90 bp CTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTCAGACCTACAGCCGCCCATGGCTGTGGAGATaGGGTCAGGGCTCGAGCCGG +
Preference number: 2 (lower is better)
Translates to: LEGCRDERCRGMTQTYSRPWLWR*GQGSSR
Trigger: CCGGCTCGAGCCCTGACCTCATCTCCACAGCCATGG...GCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR GCA 90 bp CTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCTGGCGGTGGCGTGGTTTaGTTCGATATCGGCTCTTGC +
Preference number: 2 (lower is better)
Translates to: LRRAAAGPKYLRLLAQVAGGGVV*FDIGSC
Trigger: GCAAGAGCCGATATCGAAGCAAACCACGCCACCGCC...AGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR GCA 90 bp GCTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCCAAAGTCACTATGGCTaGCTCTGCTATTCCCTCGGC +
Preference number: 2 (lower is better)
Translates to: APQGCCWAEIPQVVGAGCQSHYG*LCYSLG
Trigger: GCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTG...GCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CCA 90 bp TCTGCAGAGGCCTTGTTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATGAGAGGCCGCAGGGCTGCTGCTaGGCCGAAATACCTCAGGTT +
Preference number: 2 (lower is better)
Translates to: SAEALFFEVALEGCRDERPQGCC*AEIPQV
Trigger: AACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGG...CCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAACAAGGCCTCTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR GCA 90 bp CTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCTGGGGGCTGCTGGTATTaGTGCTGCAGAGAATTATGG +
Preference number: 2 (lower is better)
Translates to: LRRAAAGPKYLRLLAQVAGGCWY*CCRELW
Trigger: CCATAATTCTCTGCAGCAGCAATACCAGCAGCCCCC...AGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CAA 90 bp ATGGGACATCTTCCTAATAGCTTGCACATGCTGGCTGGGGTTCCCTaGGCCTGCAGTCACTGGAGGACCCTGTCCACCTGGTCACTGGAC +
Preference number: 2 (lower is better)
Translates to: MGHLPNSLHMLAGVP*ACSHWRTLSTWSLD
Trigger: GTCCAGTGACCAGGTGGACAGGGTCCTCCAGTGACTGCAGGCCAAGGGAACCCCAGCCAGCATGTGCAAGCTATTAGGAAGATGTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 90 bp TTCTGTTCTCTCACTTTCTTGATGGCCACCTCTTCCGCCCGGAACTaGCCCAAGAAGACCGCTCCTTGGGCTCCACTACCCAGCCACTGC +
Preference number: 2 (lower is better)
Translates to: FCSLTFLMATSSARN*PKKTAPWAPLPSHC
Trigger: GCAGTGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAGAGGTGGCCATCAAGAAAGTGAGAGAACAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR GCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACCTTCCGCCCGGAACTTaGCCAAGAAGACCGCTCCTT +
Preference number: 2 (lower is better)
Translates to: GSFRITSGAIHATVPANDLPPGT*PRRPLL
Trigger: AAGGAGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAG...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR CCA 90 bp CTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTCAGACCTACAGCCGCACAAGTCTGGCCGTTTaGTCTGCATCCCAGATTTGT +
Preference number: 2 (lower is better)
Translates to: LEGCRDERCRGMTQTYSRTSLAV*SASQIC
Trigger: ACAAATCTGGGATGCAGACCAAACGGCCAGACTTGT...GCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CCA 90 bp AGAGCCCATCCGAGTGTGAGGATATGTCAATGGGAATCTCTGGCGTCTGGGACAAGCATGGTTGCTGAGTaGGCTCCGCAGGGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: RAHPSVRICQWESLASGTSMVAE*APQGCC
Trigger: GCAGCAGCCCTGCGGAGCCCACTCAGCAACCATGCT...TGTCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTCGGATGGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR GCA 90 bp CTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCTTCCCGCATTTCTAGCTaGAGCATGATGGCACTCAAT +
Preference number: 2 (lower is better)
Translates to: LRRAAAGPKYLRLLAQVASRISS*SMMALN
Trigger: ATTGAGTGCCATCATGCTGCAGCTAGAAATGCGGGA...AGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR GCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACACTGGGAGATGGAGGTTaGAGTGAACTGAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: GQSRRIARAQSSIPAWATLGDGG*SELRLC
Trigger: GCACAATCTCAGTTCACTGCAACCTCCATCTCCCAG...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR GCA 90 bp GCTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCAAATGCATGAGTGTCTaGCGAAAAGAAGGTCGGTTT +
Preference number: 2 (lower is better)
Translates to: APQGCCWAEIPQVVGAGCKCMSV*RKEGRF
Trigger: AAACCGACCTTCTTTTCGGCAGACACTCATGCATTT...GCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CCA 90 bp CCACTCTTCTGCAGAGGCCTTGTTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGAGAAGGAACTGGAAGGTaGAGGCTGTTGCTTCCAACA +
Preference number: 2 (lower is better)
Translates to: PLFCRGLVFRGSAGGVPREGTGR*RLLLPT
Trigger: TGTTGGAAGCAACAGCCTCCACCTTCCAGTTCCTTC...TCTCGGCACCCCTCCAGCGCTACCTCGAAAAACAAGGCCTCTGCAGAAGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CAA 90 bp CTGCTATTCCCTCGGCGGTGGCGTGGTTTGCTTCGATATCGGCTCTaGCTGCTAGAAGTGGACATTTTGGGACTTCCGGACAAAGGGGAT +
Preference number: 2 (lower is better)
Translates to: LLFPRRWRGLLRYRL*LLEVDILGLPDKGD
Trigger: ATCCCCTTTGTCCGGAAGTCCCAAAATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR TCA 90 bp TCTGCAGAGGCCTTGTTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATGAGAGGGACCGTGCCAGCAAATaGCATCTTGGTACTTTTGTC +
Preference number: 2 (lower is better)
Translates to: SAEALFFEVALEGCRDERDRASK*HLGTFV
Trigger: GACAAAAGTACCAAGATGTCATTTGCTGGCACGGTC...CCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAACAAGGCCTCTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR GCA 90 bp TTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTGGGGTGGATCTGAAATaGCAGTATAGTCACGAGATC +
Preference number: 2 (lower is better)
Translates to: FFEVALEGCRDERCRGMTGVDLK*QYSHEI
Trigger: GATCTCGTGACTATACTGGCATTTCAGATCCACCCC...AGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR GCA 90 bp CCTCCAGGGCAGCAAGGGGCAAGATCTCATCATGCTCCTCAGAATGCTGTGCAATCTCCTCCTCAGTACTaGCCCCCAACCTTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: PPGQQGARSHHAPQNAVQSPPQY*PPTFVP
Trigger: AGGAACAAAGGTTGGGGGGCAGTACTGAGGAGGAGA...TTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 90 bp CGTGGTTTGCTTCGATATCGGCTCTTGCTGCTAGAAGTGGACATTTaGGGACTTCCGGACAAAGGGGATGCAGTGGGAGCCACTTCTGTG +
Preference number: 2 (lower is better)
Translates to: RGLLRYRLLLLEVDI*GLPDKGDAVGATSV
Trigger: CACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGAAGTCCCAAAATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAGCAAACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CAA 90 bp AAGTCACTATGGCTGCCTCTGCTATTCCCTCGGCGGTGGCGTGGTTaGCTTCGATATCGGCTCTTGCTGCTAGAAGTGGACATTTTGGGA +
Preference number: 2 (lower is better)
Translates to: KSLWLPLLFPRRWRG*LRYRLLLLEVDILG
Trigger: TCCCAAAATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR GCA 90 bp AGAGCCCATCCGAGTGTGAGGATATGTCAATGGGAATCTCTGGCGTCTGGGACACCATCCATGCGACCGTaGCAGCAAATGACATCTTGG +
Preference number: 2 (lower is better)
Translates to: RAHPSVRICQWESLASGTPSMRP*QQMTSW
Trigger: CCAAGATGTCATTTGCTGGCACGGTCGCATGGATGG...TGTCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTCGGATGGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACATTCTTTAGTCACTTATaGCCAAAAGACCTGGTCCCC +
Preference number: 2 (lower is better)
Translates to: GQSRRIARAQSSIPAWATFFSHL*PKDLVP
Trigger: GGGGACCAGGTCTTTTGGCCATAAGTGACTAAAGAA...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACATTGGGTGCAAGTATCTaGTCACCAGACTTTTCTAGG +
Preference number: 2 (lower is better)
Translates to: GQSRRIARAQSSIPAWATLGASI*SPDFSR
Trigger: CCTAGAAAAGTCTGGTGACCAGATACTTGCACCCAA...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACAAAAAATTGTTGTGCATaGTGGCACACACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: GQSRRIARAQSSIPAWATKNCCA*WHTPVV
Trigger: GACCACAGGTGTGTGCCACCATGCACAACAATTTTT...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTAAGAAGACCGCTCCTTaGGCTCCACTACCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCKKTAP*APLPSH
Trigger: GTGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTT...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR CCA 90 bp AGAGCCCATCCGAGTGTGAGGATATGTCAATGGGAATCTCTGGCGTCTGGGACAGCAAGTGGAAGGAACTaGAAGGTGGAGGCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: RAHPSVRICQWESLASGTASGRN*KVEAVA
Trigger: AGCAACAGCCTCCACCTTCCAGTTCCTTCCACTTGC...TGTCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTCGGATGGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR TCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAGGGGTGGGGTGGATCTaGAATGCCAGTATAGTCACG +
Preference number: 2 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATGVGWI*NASIVT
Trigger: CGTGACTATACTGGCATTTCAGATCCACCCCACCCC...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR TCA 90 bp ATCTCAACAAGTCTGGCCGTTTGGTCTGCATCCCAGATTTGTGAGGCACTCCTTGGGGTGGGGTGGATCTaGAATGCCAGTATAGTCACG +
Preference number: 2 (lower is better)
Translates to: ISTSLAVWSASQICEALLGVGWI*NASIVT
Trigger: CGTGACTATACTGGCATTTCAGATCCACCCCACCCC...AAGGAGTGCCTCACAAATCTGGGATGCAGACCAAACGGCCAGACTTGTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR TCA 90 bp GGACATTTTGGGACTTCCGGACAAAGGGGATGCAGTGGGAGCCACTTCTGTGGTTGCATCCCAGATTTGTaGGGCACTCCTTTCCTTTTC +
Preference number: 2 (lower is better)
Translates to: GHFGTSGQRGCSGSHFCGCIPDL*GTPFLF
Trigger: GAAAAGGAAAGGAGTGCCTCACAAATCTGGGATGCA...ACCACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGAAGTCCCAAAATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR TCA 90 bp AAGGGTATTGGGATTGAGCTTGGTGCAGGTAAGTGGGATGGGGTGAATTTTCCTGGTGGGGATCCCTTCTaGTCTCAACAAGTCTGGCCG +
Preference number: 2 (lower is better)
Translates to: KGIGIELGAGKWDGVNFPGGDPF*SQQVWP
Trigger: CGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACC...AGGAAAATTCACCCCATCCCACTTACCTGCACCAAGCTCAATCCCAATACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR GCA 90 bp CTGCTGGTATTGCTGCTGCAGAGAATTATGGTGATGAAGAGAAGGGTATTGGGACACTATGGCTGCCTCTaGTATTCCCTCGGCGGTGGC +
Preference number: 2 (lower is better)
Translates to: LLVLLLQRIMVMKRRVLGHYGCL*YSLGGG
Trigger: GCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTG...TCCCAATACCCTTCTCTTCATCACCATAATTCTCTGCAGCAGCAATACCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CCA 90 bp GAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTATTCCGTATCACCTCTaGCGCCATCCATGCGACCGT +
Preference number: 2 (lower is better)
Translates to: ECLPKRRSVSRFTLPRLFIPYHL*RHPCDR
Trigger: ACGGTCGCATGGATGGCGCCAGAGGTGATACGGAAT...AAACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
3UTR-3UTR CCA 90 bp ACAGCTTGCCCAGAGACATCTGAGTCTTCACACGGCGCACGGCACACTCCTTGTGAAGTAAGTTTCTTGTaGGGTGGCAAGTACATCTGC +
Preference number: 2 (lower is better)
Translates to: TACPETSESSHGARHTPCEVSFL*GGKYIC
Trigger: GCAGATGTACTTGCCACCCCACAAGAAACTTACTTC...ACAAGGAGTGTGCCGTGCGCCGTGTGAAGACTCAGATGTCTCTGGGCAAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CCA 90 bp GAGCTTGGTGCAGGTAAGTGGGATGGGGTGAATTTTCCTGGGCTGGCTGGTTTTTCCATGGCATTGGGATaGATGATAGGACGAACAGGG +
Preference number: 2 (lower is better)
Translates to: ELGAGKWDGVNFPGLAGFSMALG*MIGRTG
Trigger: CCCTGTTCGTCCTATCATCCATCCCAATGCCATGGA...AAAACCAGCCAGCCCAGGAAAATTCACCCCATCCCACTTACCTGCACCAAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR TCA 90 bp TCATCTCCACTCTTCTGCAGAGGCCTTGTTTTTCGAGGTAGCGCTGGAGGGGTGTTTCTAGCTGCAGCATaGTGGCACTCAATTCCATGT +
Preference number: 2 (lower is better)
Translates to: SSPLFCRGLVFRGSAGGVFLAAA*WHSIPC
Trigger: ACATGGAATTGAGTGCCATCATGCTGCAGCTAGAAA...CACCCCTCCAGCGCTACCTCGAAAAACAAGGCCTCTGCAGAAGAGTGGAGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR GCA 90 bp AGGATTTTGAATCCATCAGGGCAAGTGGAAGGAACTGGAAGGTGGAGGCTGTTGCCATCCATGCGACCGTaGCAGCAAATGACATCTTGG +
Preference number: 2 (lower is better)
Translates to: RILNPSGQVEGTGRWRLLPSMRP*QQMTSW
Trigger: CCAAGATGTCATTTGCTGGCACGGTCGCATGGATGG...CAACAGCCTCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
3UTR CAA 90 bp TTCCTCAAATGCTTGATATCCGTCTCATTCTGTTCTCTCACTTTCTaGATGGCCACCTCTTCCGCCCGGAACTTGCCCAAGAAGACCGCT +
Preference number: 2 (lower is better)
Translates to: FLKCLISVSFCSLTF*MATSSARNLPKKTA
Trigger: AGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAGAGGTGGCCATCAAGAAAGTGAGAGAACAGAATGAGACGGATATCAAGCATTTGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR TCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTGCCTGGCCAACATGGTaGAACCCCGTGTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: LASSSFSVGAPHHLANRSAWPTW*NPVSTK
Trigger: TTTAGTAGACACGGGGTTTCACCATGTTGGCCAGGC...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR GCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATAATTCATTCCACTTaGAATTCCTGTGGACCAGTC +
Preference number: 2 (lower is better)
Translates to: GSFRITSGAIHATVPANDIIHST*NSCGPV
Trigger: GACTGGTCCACAGGAATTGCAAGTGGAATGAATTAT...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000439882.1
3UTR-3UTR CCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACTTTACCGCATCTGTGTaGGTCACTAAAACATTAGGT +
Preference number: 2 (lower is better)
Translates to: GSFRITSGAIHATVPANDFTASV*VTKTLG
Trigger: ACCTAATGTTTTAGTGACCCACACAGATGCGGTAAA...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000439882.1
3UTR-3UTR CCA 90 bp CCTTCCTGGCTGTTTCTGGATCAGGTTCACACTGATACACATTTACAGTGGCCTCCGATGGCTGGGCTTTaGTTTCCGAGGGGATTTCTT +
Preference number: 2 (lower is better)
Translates to: PSWLFLDQVHTDTHLQWPPMAGL*FPRGFL
Trigger: AAGAAATCCCCTCGGAAACCAAAGCCCAGCCATCGG...AGGCCACTGTAAATGTGTATCAGTGTGAACCTGATCCAGAAACAGCCAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455188.5
3UTR-3UTR TCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCCTGGACAAGCTGGTTaGAGTGAATATGGTCTGTTC +
Preference number: 2 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSPGQAG*SEYGLF
Trigger: GAACAGACCATATTCACTTCAACCAGCTTGTCCAGG...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR TCA 90 bp CCTCCAGGGCAGCAAGGGGCAAGATCTCATCATGCTCCTCAGAATGCTGTGCAAACATGCGTCCTCAGATaGTTGTTGTACACAGAAAAT +
Preference number: 2 (lower is better)
Translates to: PPGQQGARSHHAPQNAVQTCVLR*LLYTEN
Trigger: ATTTTCTGTGTACAACAATCATCTGAGGACGCATGT...TTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR TCA 90 bp CAGACAGCATGGAACTACCAGCAGCCGCCAGTTTCCTCACAGACTAAACTAAACGGATCAGGTTCACACTaGTACACATTTACAGTGGCC +
Preference number: 2 (lower is better)
Translates to: QTAWNYQQPPVSSQTKLNGSGSH*YTFTVA
Trigger: GGCCACTGTAAATGTGTATCAGTGTGAACCTGATCC...GTTTAGTTTAGTCTGTGAGGAAACTGGCGGCTGCTGGTAGTTCCATGCTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
3UTR-3UTR GCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAGGGGTGGATCTGAAATaGCAGTATAGTCACGAGATC +
Preference number: 2 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATGVDLK*QYSHEI
Trigger: GATCTCGTGACTATACTGGCATTTCAGATCCACCCC...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR GCA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGATAATTCATTCCACTTaGAATTCCTGTGGACCAGTC +
Preference number: 2 (lower is better)
Translates to: FRITSGAIHATVPANDILIIHST*NSCGPV
Trigger: GACTGGTCCACAGGAATTGCAAGTGGAATGAATTAT...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000439882.1
3UTR-3UTR GCA 90 bp GGACATTTTGGGACTTCCGGACAAAGGGGATGCAGTGGGAGCCACTTCTGTGGTATACTTCTTTTCCACTaGTTGCTCACGCTTAATGAG +
Preference number: 2 (lower is better)
Translates to: GHFGTSGQRGCSGSHFCGILLFH*LLTLNE
Trigger: CTCATTAAGCGTGAGCAAGCAGTGGAAAAGAAGTAT...ACCACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGAAGTCCCAAAATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTTATGGCCAAAAGACCTaGTCCCCTGTTCAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LASSSFSVGAPHHLANRSYGQKT*SPVQAA
Trigger: TGCTGCTTGAACAGGGGACCAGGTCTTTTGGCCATA...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp TTTGATAGTCATTCTTGTTCCCATTGCCGTTCAATACAGAGAGGGAGCCGGCATTGTCCAAAAGGGCAGTaGGTAGAGGCAAGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: FDSHSCSHCRSIQRGSRHCPKGQ*VEASGL
Trigger: AAGGCCACTTGCCTCTACCCACTGCCCTTTTGGACA...ATGCCGGCTCCCTCTCTGTATTGAACGGCAATGGGAACAAGAATGACTATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp AAGCTGAAGTCTGAACAGACAGCATGGAACTACCAGCAGCCGCCAGTTTCCTCACATTTACAGTGGCCTTaGAAGCTACCAACCAACACA +
Preference number: 2 (lower is better)
Translates to: KLKSEQTAWNYQQPPVSSHLQWP*KLPTNT
Trigger: TGTGTTGGTTGGTAGCTTCCAAGGCCACTGTAAATG...TGAGGAAACTGGCGGCTGCTGGTAGTTCCATGCTGTCTGTTCAGACTTCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
3UTR-3UTR TCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCGATTTGAGATCACGATaGATAATTTTATGGAGGTGC +
Preference number: 2 (lower is better)
Translates to: SFRITSGAIHATVPANDIDLRSR*IILWRC
Trigger: GCACCTCCATAAAATTATTCATCGTGATCTCAAATC...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000439882.1
3UTR-3UTR TCA 90 bp ATTTTGAATCCATCAGGGCAAGTGGAAGGAACTGGAAGGTGGAGGCTGTTGCTTGACCGTGCCAGCAAATaGCATCTTGGTACTTTTGTC +
Preference number: 2 (lower is better)
Translates to: ILNPSGQVEGTGRWRLLLDRASK*HLGTFV
Trigger: GACAAAAGTACCAAGATGTCATTTGCTGGCACGGTC...AAGCAACAGCCTCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
3UTR-3UTR GCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACACACATACATCCTAGCTaGCTTCAAAGTCTGTTCTCC +
Preference number: 2 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATHIHPS*LQSLFS
Trigger: GGAGAACAGACTTTGAAGGCAGCTAGGATGTATGTG...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp CTGCTGGTATTGCTGCTGCAGAGAATTATGGTGATGAAGAGAAGGGTATTGGGAATCCATCAGGGCAAGTaGAAGGAACTGGAAGGTGGA +
Preference number: 2 (lower is better)
Translates to: LLVLLLQRIMVMKRRVLGIHQGK*KELEGG
Trigger: TCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGAT...TCCCAATACCCTTCTCTTCATCACCATAATTCTCTGCAGCAGCAATACCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CAA 90 bp GTCCAACATGATGCAGTGTCAAAGAGTCCAGTGAATCTAGAGAGGTaGTTTGACGGTAATCTGTCTTGGAGACAGGGACAGGTACTAGGT +
Preference number: 2 (lower is better)
Translates to: VQHDAVSKSPVNLER*FDGNLSWRQGQVLG
Trigger: ACCTAGTACCTGTCCCTGTCTCCAAGACAGATTACCGTCAAACAACCTCTCTAGATTCACTGGACTCTTTGACACTGCATCATGTTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 90 bp CTGCCAAGCGGTCTTCAAGTTTATCAGCTAACTCATCAGGACTGTTaGAGTGGTCACTGGTATTTCCCTCTTCTCCATCAGACACAGAGA +
Preference number: 2 (lower is better)
Translates to: LPSGLQVYQLTHQDC*SGHWYFPLLHQTQR
Trigger: TCTCTGTGTCTGATGGAGAAGAGGGAAATACCAGTGACCACTCAAACAGTCCTGATGAGTTAGCTGATAAACTTGAAGACCGCTTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR GCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAACAAAAATGCTATTGTaGTGGGAGAGGAGTTGCCTT +
Preference number: 2 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATTKMLL*WERSCL
Trigger: AAGGCAACTCCTCTCCCAGCACAATAGCATTTTTGT...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTTCACAATGTATCCATTaGGCTTCAGGGCAGAACATG +
Preference number: 2 (lower is better)
Translates to: LASSSFSVGAPHHLANRSSQCIH*ASGQNM
Trigger: CATGTTCTGCCCTGAAGCCCAATGGATACATTGTGA...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 90 bp CCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATaGGGCTTCAGGGCAGAACATGCGTCCTCAGATGATTGTTGTACA +
Preference number: 2 (lower is better)
Translates to: PPRSFHDQVKITMYP*GFRAEHASSDDCCT
Trigger: TGTACAACAATCATCTGAGGACGCATGTTCTGCCCTGAAGCCCAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 90 bp CCCTTGAATGCGATGATGTTAGGGTGCTTCAACTTCCTCAAATGCTaGATATCCGTCTCATTCTGTTCTCTCACTTTCTTGATGGCCACC +
Preference number: 2 (lower is better)
Translates to: PLNAMMLGCFNFLKC*ISVSFCSLTFLMAT
Trigger: GGTGGCCATCAAGAAAGTGAGAGAACAGAATGAGACGGATATCAAGCATTTGAGGAAGTTGAAGCACCCTAACATCATCGCATTCAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR TCA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCACAAGCTGGTTGAAGTaGATATGGTCTGTTCACAAG +
Preference number: 2 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLTSWLK*IWSVHK
Trigger: CTTGTGAACAGACCATATTCACTTCAACCAGCTTGT...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR TCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATGGAAGCACATGCCCTTaGAGACATTGGGTGCAAGTA +
Preference number: 2 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDGSTCP*RHWVQV
Trigger: TACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCC...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR TCA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCCAGTACAGTGAGATCTaGAGTCAAGAGGATGGAAAA +
Preference number: 2 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLQYSEI*SQEDGK
Trigger: TTTTCCATCCTCTTGACTTCAGATCTCACTGTACTG...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR GCA 90 bp TTCATTCCACTTGCAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTGATCGCGATGATGTTAGGGTaGTTCAACTTCCTCAAATGC +
Preference number: 2 (lower is better)
Translates to: FIPLAIPVDQSTSNRGVIAMMLG*FNFLKC
Trigger: GCATTTGAGGAAGTTGAAGCACCCTAACATCATCGC...GATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTGGAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR CCA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCAAAATGCTATTGTGCTaGGAGAGGAGTTGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLKMLLC*ERSCLL
Trigger: CAAAAGGCAACTCCTCTCCCAGCACAATAGCATTTT...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp TTTGATAGTCATTCTTGTTCCCATTGCCGTTCAATACAGAGAGGGAGCCGGCATCAGGGAGCTCCCAAATaGGAATTCCATTTTCATTCC +
Preference number: 2 (lower is better)
Translates to: FDSHSCSHCRSIQRGSRHQGAPK*EFHFHS
Trigger: GGAATGAAAATGGAATTCCCATTTGGGAGCTCCCTG...ATGCCGGCTCCCTCTCTGTATTGAACGGCAATGGGAACAAGAATGACTATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTAGCGAAGGACCAGGCTaGGCTAGAGAAGGTATTTCC +
Preference number: 2 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFSEGPG*AREGIS
Trigger: GGAAATACCTTCTCTAGCCCAGCCTGGTCCTTCGCT...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTTACCGCATCTGTGTaGGTCACTAAAACATTAGGT +
Preference number: 2 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCFTASV*VTKTLG
Trigger: ACCTAATGTTTTAGTGACCCACACAGATGCGGTAAA...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR CCA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTGATAATACAATAACATaGGGCCTGAGTACAAACACC +
Preference number: 2 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCDNTIT*GLSTNT
Trigger: GGTGTTTGTACTCAGGCCCCATGTTATTGTATTATC...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR TCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGGGGTGGGGTGGATCTaGAATGCCAGTATAGTCACG +
Preference number: 2 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSGVGWI*NASIVT
Trigger: CGTGACTATACTGGCATTTCAGATCCACCCCACCCC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
3UTR-3UTR TCA 90 bp AGGATTTTGAATCCATCAGGGCAAGTGGAAGGAACTGGAAGGTGGAGGCTGTTGGATTTGAGATCACGATaGATAATTTTATGGAGGTGC +
Preference number: 2 (lower is better)
Translates to: RILNPSGQVEGTGRWRLLDLRSR*IILWRC
Trigger: GCACCTCCATAAAATTATTCATCGTGATCTCAAATC...CAACAGCCTCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR GCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTTGCTGGGAGAGGAGTTaGCTTTTGCAAGCTGCTTGT +
Preference number: 2 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFCWERS*LLQAAC
Trigger: ACAAGCAGCTTGCAAAAGGCAACTCCTCTCCCAGCA...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR GCA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTCAACTTCCTCAAATaGTTGATATCCGTCTCATTC +
Preference number: 2 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCFNFLK*LISVSF
Trigger: GAATGAGACGGATATCAAGCATTTGAGGAAGTTGAA...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR TCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTAAGGCCAAGGCACCATaGAGTACCTTGGAATGCTTT +
Preference number: 2 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFKAKAP*STLECF
Trigger: AAAGCATTCCAAGGTACTTCATGGTGCCTTGGCCTT...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR TCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTGAAATCACAGTCTTGTaGGGTTCCTGGAAGCACTGT +
Preference number: 2 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFEITVL*GSWKHC
Trigger: ACAGTGCTTCCAGGAACCTCACAAGACTGTGATTTC...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR GCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGTCATGTTCCTGTTATTaGAGCTCATTTCTAGGGGGT +
Preference number: 2 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLSCSCY*SSFLGG
Trigger: ACCCCCTAGAAATGAGCTGCAATAACAGGAACATGA...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCTGTTCACAAGTTGCCTaGAATTGCTTTTCTTTTGCT +
Preference number: 2 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLCSQVA*NCFSFA
Trigger: AGCAAAAGAAAAGCAATTCCAGGCAACTTGTGAACA...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTATAAAAACAAAGGGATaGTTTGGGCTCAGACATTGT +
Preference number: 2 (lower is better)
Translates to: LASSSFSVGAPHHLANRSIKTKG*FGLRHC
Trigger: ACAATGTCTGAGCCCAAACCATCCCTTTGTTTTTAT...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACGAGAACAAAGGGGTCTaGCAGGAAGGAGATTGCAAA +
Preference number: 2 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYENKGV*QEGDCK
Trigger: TTTGCAATCTCCTTCCTGCCAGACCCCTTTGTTCTC...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 90 bp CAACCAACACAGCGAGGTGGGAGGGTTTGTTACTCTAACTCTTGTTaGATAACTGCTTATCAGCAACTTCTCAAAGGTCGACTTAAATGT +
Preference number: 2 (lower is better)
Translates to: QPTQRGGRVCYSNSC*ITAYQQLLKGRLKC
Trigger: ACATTTAAGTCGACCTTTGAGAAGTTGCTGATAAGCAGTTATCAAACAAGAGTTAGAGTAACAAACCCTCCCACCTCGCTGTGTTGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
3UTR-3UTR GCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACAATCCTTCCTATCCCTaGTCAGCATCCCTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYNPSYP*SASLVL
Trigger: AAGAACAAGGGATGCTGAGCAGGGATAGGAAGGATT...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR GCA 90 bp CCTTCCTGGCTGTTTCTGGATCAGGTTCACACTGATACACATTTACAGTGGCCTCTCTTGTTTGATAACTaGTTATCAGCAACTTCTCAA +
Preference number: 2 (lower is better)
Translates to: PSWLFLDQVHTDTHLQWPLLFDN*LSATSQ
Trigger: TTGAGAAGTTGCTGATAAGCAGTTATCAAACAAGAG...AGGCCACTGTAAATGTGTATCAGTGTGAACCTGATCCAGAAACAGCCAGGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
3UTR-3UTR CCA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATTGTTCCTACAGGAAGTaGTCAGCAGGCAGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYCSYRK*SAGRKE
Trigger: TTCCTTTCTGCCTGCTGACCACTTCCTGTAGGAACA...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 90 bp ATCACTGAAAGATGTAAGATAAAAGCTGACCCTCATGTTTCTCTGTaGCCACTAAAGGTGGGCAAGAATTGGACAAAACTGCCAGTGTTT +
Preference number: 2 (lower is better)
Translates to: ITERCKIKADPHVSL*PLKVGKNWTKLPVF
Trigger: AAACACTGGCAGTTTTGTCCAATTCTTGCCCACCTTTAGTGGCAACAGAGAAACATGAGGGTCAGCTTTTATCTTACATCTTTCAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR GCA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATCTTGAAGACATTGGGTaGAAGTATCTGGTCACCAGA +
Preference number: 2 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYLEDIG*KYLVTR
Trigger: TCTGGTGACCAGATACTTGCACCCAATGTCTTCAAG...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR GCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGCAAAGTCTGTTCTCCTaGTTGAATCAATATGACTCA +
Preference number: 2 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLQSLFS*LNQYDS
Trigger: TGAGTCATATTGATTCAAGCAGGAGAACAGACTTTG...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR GCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATAGCATTGAACAAAAATaGTATTGTGCTGGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDSIEQK*YCAGRG
Trigger: TCCTCTCCCAGCACAATAGCATTTTTGTTCAATGCT...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR GCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACAAGACCCCCAGTGGATaGCTAAAAACTCTGATAGTA +
Preference number: 2 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYKTPSG*LKTLIV
Trigger: TACTATCAGAGTTTTTAGGCATCCACTGGGGGTCTT...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR TCA 90 bp GGGACGTATTTGCCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAAGATCCCTGCCATTCTTaGTTGAAATGTTCAGTGAGA +
Preference number: 2 (lower is better)
Translates to: GTYLPKTRFDTICKPHYQDPCHS*LKCSVR
Trigger: TCTCACTGAACATTTCAATCAAGAATGGCAGGGATC...TTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR TCA 90 bp TATGGAGGTGCAAATAATTCATTCCACTTGCAATTCCTGTGGACCAGTCTACTAACTTCCTCAAATGCTTaGTATCCGTCTCATTCTGTT +
Preference number: 2 (lower is better)
Translates to: YGGANNSFHLQFLWTSLLTSSNA*YPSHSV
Trigger: AACAGAATGAGACGGATATCAAGCATTTGAGGAAGT...TAGTAGACTGGTCCACAGGAATTGCAAGTGGAATGAATTATTTGCACCTCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR GCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACACAGGCAGGACCTCATaGTTTTGGCAATGTAAAAAT +
Preference number: 2 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYTGRTS*FWQCKN
Trigger: ATTTTTACATTGCCAAAAGCATGAGGTCCTGCCTGT...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 90 bp GACAGTGACAGCACTAAAAAGGGACGTATTTGCCAAAAACAAGATTaGACACTATCTGTAAACCTCACTACCAACTGCTGCTTAAACATT +
Preference number: 2 (lower is better)
Translates to: DSDSTKKGRICQKQD*TLSVNLTTNCCLNI
Trigger: AATGTTTAAGCAGCAGTTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCCTTTTTAGTGCTGTCACTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 90 bp AATGAGTTATTGAATAAAAACAAAGGGATGGTTTGGGCTCAGACATaGTATAGACACACATACATCCTAGCTGCCTTCAAAGTCTGTTCT +
Preference number: 2 (lower is better)
Translates to: NELLNKNKGMVWAQT*YRHTYILAAFKVCS
Trigger: AGAACAGACTTTGAAGGCAGCTAGGATGTATGTGTGTCTATACAATGTCTGAGCCCAAACCATCCCTTTGTTTTTATTCAATAACTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 90 bp ATTGTTTATTTCTGGAATGTTCCATCAAATATTTTTGGACTGCTGTaGAGCGTAACTGAAACCATGAAAATGAAGCCATGGGTAAGAGGG +
Preference number: 2 (lower is better)
Translates to: IVYFWNVPSNIFGLL*SVTETMKMKPWVRG
Trigger: CCCTCTTACCCATGGCTTCATTTTCATGGTTTCAGTTACGCTCAACAGCAGTCCAAAAATATTTGATGGAACATTCCAGAAATAAACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR TCA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCAACCCAGGAGCTTTCATaGTCAAGTCAAAATCACAAT +
Preference number: 2 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSTQELS*SSQNHN
Trigger: ATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGT...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR GCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACGGCAACATTTTCATGTaGATTGGAAATGGTTTAACA +
Preference number: 2 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYGNIFM*IGNGLT
Trigger: TGTTAAACCATTTCCAATGCACATGAAAATGTTGCC...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CCA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATCATTTTCATGTGCATTaGAAATGGTTTAACAGCTGT +
Preference number: 2 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYHFHVH*KWFNSC
Trigger: ACAGCTGTTAAACCATTTCCAATGCACATGAAAATG...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp CTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTCAGACCTACAGCCGCGCCCCAGGGACCAGCTaGGCCCTTGTCAGGCTCAGA +
Preference number: 3 (lower is better)
Translates to: LEGCRDERCRGMTQTYSRAPGTS*ALVRLR
Trigger: TCTGAGCCTGACAAGGGCCAAGCTGGTCCCTGGGGC...GCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 72 bp GGCAAGTGGCCTTTCCCCTTTCTGTGGTACCGCCCCTaGCAGCCACAGGTGGACACTAGTGCGAGCCTGTCG +
Preference number: 3 (lower is better)
Translates to: GKWPFPFLWYRP*QPQVDTSASLS
Trigger: CGACAGGCTCGCACTAGTGTCCACCTGTGGCTGTCAGGGGCGGTACCACAGAAAGGGGAAAGGCCACTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 72 bp CTGAGCATGGTTGCTGAGTGGGCTCCGCAGGGCTGCTaGTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGT +
Preference number: 3 (lower is better)
Translates to: LSMVAEWAPQGC*WAEIPQVVGAG
Trigger: ACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGCCCACTCAGCAACCATGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 72 bp AGCATGGTTGCTGAGTGGGCTCCGCAGGGCTGCTGCTaGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGC +
Preference number: 3 (lower is better)
Translates to: SMVAEWAPQGCC*AEIPQVVGAGC
Trigger: GCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGCCCACTCAGCAACCATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 72 bp TCCCCTTTCTGTGGTACCGCCCCTGACAGCCACAGGTaGACACTAGTGCGAGCCTGTCGTTCTGCCATTGGG +
Preference number: 3 (lower is better)
Translates to: SPFCGTAPDSHR*TLVRACRSAIG
Trigger: CCCAATGGCAGAACGACAGGCTCGCACTAGTGTCCACCTGTGGCTGTCAGGGGCGGTACCACAGAAAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp TCTTCCGCCCGGAACTTGCCCAAGAAGACCGCTCCTTaGGCTCCACTACCCAGCCACTGCAGCTCTGAGATC +
Preference number: 3 (lower is better)
Translates to: SSARNLPKKTAP*APLPSHCSSEI
Trigger: GATCTCAGAGCTGCAGTGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR TCA 72 bp CTTGTTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATaGGAGGTGCCGAGGGATGACTCAGACCTACAGCCG +
Preference number: 3 (lower is better)
Translates to: LVFRGSAGGVPR*EVPRDDSDLQP
Trigger: CGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 72 bp CCACGTTCCTCCACACACAGCTTGCCCAGAGACATCTaGGTCTTCACACGGCGCACGGCACACTCCTTGTCA +
Preference number: 3 (lower is better)
Translates to: PRSSTHSLPRDI*VFTRRTAHSLS
Trigger: TGACAAGGAGTGTGCCGTGCGCCGTGTGAAGACTCAGATGTCTCTGGGCAAGCTGTGTGTGGAGGAACGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 72 bp AGCAGACCTGGGATGCTGCCGGGAGCTTCCTTACAGTaGCCTTGCCATCTGCTTAGGGCTCTGCTCTGTGAA +
Preference number: 3 (lower is better)
Translates to: SRPGMLPGASLQ*PCHLLRALLCE
Trigger: TTCACAGAGCAGAGCCCTAAGCAGATGGCAAGGCCACTGTAAGGAAGCTCCCGGCAGCATCCCAGGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp TTCCTAATAGCTTGCACATGCTGGCTGGGGTTCCCTTaGCCTGCAGTCACTGGAGGACCCTGTCCACCTGGT +
Preference number: 3 (lower is better)
Translates to: FLIACTCWLGFP*PAVTGGPCPPG
Trigger: ACCAGGTGGACAGGGTCCTCCAGTGACTGCAGGCCAAGGGAACCCCAGCCAGCATGTGCAAGCTATTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp CTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTCAGACCTACAGCCGCCTTGAAGTAAGTTTCTaGTGGGGTGGCAAGTACATC +
Preference number: 3 (lower is better)
Translates to: LEGCRDERCRGMTQTYSRLEVSF*WGGKYI
Trigger: GATGTACTTGCCACCCCACAAGAAACTTACTTCAAG...GCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 72 bp TGCAGTGGGAGCCACTTCTGTGGTGGGGATCCCTTCTaGTCTCAACAAGTCTGGCCGTTTGGTCTGCATCCC +
Preference number: 3 (lower is better)
Translates to: CSGSHFCGGDPF*SQQVWPFGLHP
Trigger: GGGATGCAGACCAAACGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACCACAGAAGTGGCTCCCACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 72 bp GCTATGTCCTGTCCGTGCATATTGAGTCTGGGATGGTaGCTCTGGGACATGGCAGGAGGGGGCTGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: AMSCPCILSLGW*LWDMAGGGCWY
Trigger: ATACCAGCAGCCCCCTCCTGCCATGTCCCAGAGTCACCATCCCAGACTCAATATGCACGGACAGGACATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 72 bp CGCTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATaGCTCAGACCTACAGCCGCTGAATTCATTTTCTTC +
Preference number: 3 (lower is better)
Translates to: RWRGAEMRGAEG*LRPTAAEFIFF
Trigger: GAAGAAAATGAATTCAGCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR GCA 72 bp CTTCCTTACAGTGGCCTTGCCATCTGCTTAGGGCTCTaGTCTGTGAAGTCCTGCCATCGTACCCTGGCCACA +
Preference number: 3 (lower is better)
Translates to: LPYSGLAICLGL*SVKSCHRTLAT
Trigger: TGTGGCCAGGGTACGATGGCAGGACTTCACAGAGCAGAGCCCTAAGCAGATGGCAAGGCCACTGTAAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp CGGACAAAGGGGATGCAGTGGGAGCCACTTCTGTGGTaGGGATCCCTTCTGATCTCAACAAGTCTGGCCGTT +
Preference number: 3 (lower is better)
Translates to: RTKGMQWEPLLW*GSLLISTSLAV
Trigger: AACGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACCACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 72 bp TTCCGGACAAAGGGGATGCAGTGGGAGCCACTTCTGTaGTGGGGATCCCTTCTGATCTCAACAAGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: FRTKGMQWEPLL*WGSLLISTSLA
Trigger: GGCCAGACTTGTTGAGATCAGAAGGGATCCCCACCACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 72 bp GCTGGCTGGTTTTTCAAGATTGCGGCAAAGTCACTATaGCTGCCTCTGCTATTCCCTCGGCGGTGGCGTGGT +
Preference number: 3 (lower is better)
Translates to: AGWFFKIAAKSL*LPLLFPRRWRG
Trigger: ACCACGCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTGCCGCAATCTTGAAAAACCAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CAA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACAAGGAAGCACATGCCCTaGAAGACATTGGGTGCAAGT +
Preference number: 3 (lower is better)
Translates to: GQSRRIARAQSSIPAWATRKHMP*KTLGAS
Trigger: ACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCT...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACTGTTCTCTCACTTTCTaGATGGCCACCTCTTCCGCC +
Preference number: 3 (lower is better)
Translates to: GSFRITSGAIHATVPANDCSLTF*MATSSA
Trigger: GGCGGAAGAGGTGGCCATCAAGAAAGTGAGAGAACA...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR CAA 90 bp TCTGCAGAGGCCTTGTTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATGAGAGGCTAGAAGTGGACATTTaGGGACTTCCGGACAAAGGG +
Preference number: 3 (lower is better)
Translates to: SAEALFFEVALEGCRDERLEVDI*GLPDKG
Trigger: CCCTTTGTCCGGAAGTCCCAAAATGTCCACTTCTAG...CCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAACAAGGCCTCTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CAA 90 bp AGAGCCCATCCGAGTGTGAGGATATGTCAATGGGAATCTCTGGCGTCTGGGACAGGACCAGCTTGGCCCTaGTCAGGCTCAGAACTTCTC +
Preference number: 3 (lower is better)
Translates to: RAHPSVRICQWESLASGTGPAWP*SGSELL
Trigger: GAGAAGTTCTGAGCCTGACAAGGGCCAAGCTGGTCC...TGTCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTCGGATGGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 72 bp ACTCTGGGCGTTTTCCAAGAGAGGATTATGTGCTGGTaGCTTGGAAAGGTCAGGGCTCCTCCCCACTGGCTC +
Preference number: 3 (lower is better)
Translates to: TLGVFQERIMCW*LGKVRAPPHWL
Trigger: GAGCCAGTGGGGAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAATCCTCTCTTGGAAAACGCCCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 72 bp CACGGCACACTCCTTGTCAGAGAGCCCATCCGAGTGTaGGGATATGTCAATGGGAATCTCTGGCGTCTGGGA +
Preference number: 3 (lower is better)
Translates to: HGTLLVREPIRV*GYVNGNLWRLG
Trigger: TCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTCGGATGGGCTCTCTGACAAGGAGTGTGCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR GCA 72 bp GCTGGTTTTTCAAGATTGCGGCAAAGTCACTATGGCTaGCTCTGCTATTCCCTCGGCGGTGGCGTGGTTTGC +
Preference number: 3 (lower is better)
Translates to: AGFSRLRQSHYG*LCYSLGGGVVC
Trigger: GCAAACCACGCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTGCCGCAATCTTGAAAAACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 72 bp GCAAGATGGGACATCTTCCTAATAGCTTGCACATGCTaGCTGGGGTTCCCTTGGCCTGCAGTCACTGGAGGA +
Preference number: 3 (lower is better)
Translates to: ARWDIFLIACTC*LGFPWPAVTGG
Trigger: TCCTCCAGTGACTGCAGGCCAAGGGAACCCCAGCCAGCATGTGCAAGCTATTAGGAAGATGTCCCATCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp ACTATGGCTGCCTCTGCTATTCCCTCGGCGGTGGCGTaGTTTGCTTCGATATCGGCTCTTGCTGCTAGAAGT +
Preference number: 3 (lower is better)
Translates to: TMAASAIPSAVA*FASISALAARS
Trigger: ACTTCTAGCAGCAAGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 72 bp AAGTCACTATGGCTGCCTCTGCTATTCCCTCGGCGGTaGCGTGGTTTGCTTCGATATCGGCTCTTGCTGCTA +
Preference number: 3 (lower is better)
Translates to: KSLWLPLLFPRR*RGLLRYRLLLL
Trigger: TAGCAGCAAGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 72 bp GAGTGTGAGGATATGTCAATGGGAATCTCTGGCGTCTaGGACAGCAGGTCGTCTAGCTTCTCTGCCAAGCGG +
Preference number: 3 (lower is better)
Translates to: ECEDMSMGISGV*DSRSSSFSAKR
Trigger: CCGCTTGGCAGAGAAGCTAGACGACCTGCTGTCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CAA 90 bp GAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTTCTTCCGCCCGGAACTaGCCCAAGAAGACCGCTCCT +
Preference number: 3 (lower is better)
Translates to: ECLPKRRSVSRFTLPRLFSSARN*PKKTAP
Trigger: AGGAGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAGA...AAACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR CAA 90 bp TTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTGCTGGTTTTTCAAGATaGCGGCAAAGTCACTATGGC +
Preference number: 3 (lower is better)
Translates to: FFEVALEGCRDERCRGMTAGFSR*RQSHYG
Trigger: GCCATAGTGACTTTGCCGCAATCTTGAAAAACCAGC...AGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR GCA 72 bp GTGATATGGGCAAGATGGGACATCTTCCTAATAGCTTaGACATGCTGGCTGGGGTTCCCTTGGCCTGCAGTC +
Preference number: 3 (lower is better)
Translates to: VIWARWDIFLIA*TCWLGFPWPAV
Trigger: GACTGCAGGCCAAGGGAACCCCAGCCAGCATGTGCAAGCTATTAGGAAGATGTCCCATCTTGCCCATATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 72 bp TGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTaGTATGTCCTGTCCGTGCATATTGAGTCTGGGATG +
Preference number: 3 (lower is better)
Translates to: CWAEIPQVVGAG*YVLSVHIESGM
Trigger: CATCCCAGACTCAATATGCACGGACAGGACATAGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 72 bp TGTCAGAGAGCCCATCCGAGTGTGAGGATATGTCAATaGGAATCTCTGGCGTCTGGGACAGCAGGTCGTCTA +
Preference number: 3 (lower is better)
Translates to: CQRAHPSVRICQ*ESLASGTAGRL
Trigger: TAGACGACCTGCTGTCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTCGGATGGGCTCTCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR GCA 72 bp TTTTCAAGATTGCGGCAAAGTCACTATGGCTGCCTCTaGTATTCCCTCGGCGGTGGCGTGGTTTGCTTCGAT +
Preference number: 3 (lower is better)
Translates to: FSRLRQSHYGCL*YSLGGGVVCFD
Trigger: ATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTGCCGCAATCTTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CAA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACAGTGAATCTAGAGAGGTaGTTTGACGGTAATCTGTCT +
Preference number: 3 (lower is better)
Translates to: GQSRRIARAQSSIPAWATVNLER*FDGNLS
Trigger: AGACAGATTACCGTCAAACAACCTCTCTAGATTCAC...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp AGAGCCCATCCGAGTGTGAGGATATGTCAATGGGAATCTCTGGCGTCTGGGACAAAATACCTCAGGTTGTaGGCGCAGGTTGCTATGTCC +
Preference number: 3 (lower is better)
Translates to: RAHPSVRICQWESLASGTKYLRL*AQVAMS
Trigger: GGACATAGCAACCTGCGCCAACAACCTGAGGTATTT...TGTCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTCGGATGGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CAA 90 bp GAGTTCTCTATCTGTTTAGTAGCACCTGGTAGGAAGTTTCCCAACTTACCTGAGCAAGAAGACCGCTCCTaGGGCTCCACTACCCAGCCA +
Preference number: 3 (lower is better)
Translates to: EFSICLVAPGRKFPNLPEQEDRS*GSTTQP
Trigger: TGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTTG...CTCAGGTAAGTTGGGAAACTTCCTACCAGGTGCTACTAAACAGATAGAGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR CAA 90 bp TTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTTGTTTCATAAGGATTTaGAATCCATCAGGGCAAGTG +
Preference number: 3 (lower is better)
Translates to: FFEVALEGCRDERCRGMTCFIRI*NPSGQV
Trigger: CACTTGCCCTGATGGATTCAAAATCCTTATGAAACA...AGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CAA 90 bp TCCAAGAGAGGATTATGTGCTGGTGACTTGGAAAGGTCAGGGCTCCTCCCCACTCTTCGATATCGGCTCTaGCTGCTAGAAGTGGACATT +
Preference number: 3 (lower is better)
Translates to: SKRGLCAGDLERSGLLPTLRYRL*LLEVDI
Trigger: AATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAG...AGTGGGGAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAATCCTCTCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 72 bp CACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATaGCATCTTGGTACTTTTGTCACTGAGTTCCTTAGA +
Preference number: 3 (lower is better)
Translates to: HLWRHPCDRASK*HLGTFVTEFLR
Trigger: TCTAAGGAACTCAGTGACAAAAGTACCAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
3UTR TCA 72 bp GAGAGGTGCCGAGGGATGACTCAGACCTACAGCCGCTaGATTCATTTTCTTCCGTTTTCTCAGAACTCTGGG +
Preference number: 3 (lower is better)
Translates to: ERCRGMTQTYSR*IHFLPFSQNSG
Trigger: CCCAGAGTTCTGAGAAAACGGAAGAAAATGAATTCAGCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR GCA 72 bp TCAGAGCCCATGACCCTGGAGACAGGCAGGACCTCATaGTTTTGGCAATGTAAAAATCCTTCCTATCCCTGC +
Preference number: 3 (lower is better)
Translates to: SEPMTLETGRTS*FWQCKNPSYPC
Trigger: GCAGGGATAGGAAGGATTTTTACATTGCCAAAAGCATGAGGTCCTGCCTGTCTCCAGGGTCATGGGCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp ACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTaGTTCCATCTTCTCCTCGTAGCTGAACTGAGTGAT +
Preference number: 3 (lower is better)
Translates to: TQVDKQPGSREG*FHLLLVAELSD
Trigger: ATCACTCAGTTCAGCTACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp GTCTGGGAAGTGGTCACTCTGAAGGTGAAGAGCCACTaGGGTGATATGGGCAAGATGGGACATCTTCCTAAT +
Preference number: 3 (lower is better)
Translates to: VWEVVTLKVKSH*GDMGKMGHLPN
Trigger: ATTAGGAAGATGTCCCATCTTGCCCATATCACCCCAGTGGCTCTTCACCTTCAGAGTGACCACTTCCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp GAGAAGGGTATTGGGATTGAGCTTGGTGCAGGTAAGTaGGATGGGGTGAATTTTCCTGGGCTGGCTGGTTTT +
Preference number: 3 (lower is better)
Translates to: EKGIGIELGAGK*DGVNFPGLAGF
Trigger: AAAACCAGCCAGCCCAGGAAAATTCACCCCATCCCACTTACCTGCACCAAGCTCAATCCCAATACCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 72 bp GATCAGGTTCACACTGATACACATTTACAGTGGCCTTaGAAGCTACCAACCAACACAGCGAGGTGGGAGGGT +
Preference number: 3 (lower is better)
Translates to: DQVHTDTHLQWP*KLPTNTARWEG
Trigger: ACCCTCCCACCTCGCTGTGTTGGTTGGTAGCTTCCAAGGCCACTGTAAATGTGTATCAGTGTGAACCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
3UTR-3UTR CAA 90 bp GCGGTGGCGTGGTTTGCTTCGATATCGGCTCTTGCTGCTAGAAGTGGACATTTTAGTTTCTCCATGGCATaGGGATGGATGATAGGACGA +
Preference number: 3 (lower is better)
Translates to: AVAWFASISALAARSGHFSFSMA*GWMIGR
Trigger: TCGTCCTATCATCCATCCCAATGCCATGGAGAAACT...AAAATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAGCAAACCACGCCACCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 72 bp TGCTCTGTGAAGTCCTGCCATCGTACCCTGGCCACATaGCAGTTAACAAAAGCCTTAACCCACCTCCTGTTT +
Preference number: 3 (lower is better)
Translates to: CSVKSCHRTLAT*QLTKALTHLLF
Trigger: AAACAGGAGGTGGGTTAAGGCTTTTGTTAACTGTCATGTGGCCAGGGTACGATGGCAGGACTTCACAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 72 bp CAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTaGTCTTCCTGCCAGCTCGTAAGACCTCGTAGAGTT +
Preference number: 3 (lower is better)
Translates to: QFLWTSLLAIEV*SSCQLVRPRRV
Trigger: AACTCTACGAGGTCTTACGAGCTGGCAGGAAGATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR CCA 72 bp TCTGGCTCTTCTTTAGTCACTTATGGCCAAAAGACCTaGTCCCCTGTTCAAGCAGCAATAATACCTCCCGGC +
Preference number: 3 (lower is better)
Translates to: SGSSLVTYGQKT*SPVQAAIIPPG
Trigger: GCCGGGAGGTATTATTGCTGCTTGAACAGGGGACCAGGTCTTTTGGCCATAAGTGACTAAAGAAGAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp ACTACTTACACCAAGCTGAAGTCTGAACAGACAGCATaGAACTACCAGCAGCCGCCAGTTTCCTCACAGACT +
Preference number: 3 (lower is better)
Translates to: TTYTKLKSEQTA*NYQQPPVSSQT
Trigger: AGTCTGTGAGGAAACTGGCGGCTGCTGGTAGTTCCATGCTGTCTGTTCAGACTTCAGCTTGGTGTAAGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
3UTR-3UTR CAA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTATGTCCATCCACTATTaGACATCCTGGGGGTCATCG +
Preference number: 3 (lower is better)
Translates to: LASSSFSVGAPHHLANRSMSIHY*TSWGSS
Trigger: CGATGACCCCCAGGATGTCAAATAGTGGATGGACAT...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp ATCTCAACAAGTCTGGCCGTTTGGTCTGCATCCCAGATTTGTGAGGCACTCCTTCTTCTTTTCCACTGCTaGCTCACGCTTAATGAGCTC +
Preference number: 3 (lower is better)
Translates to: ISTSLAVWSASQICEALLLLFHC*LTLNEL
Trigger: GAGCTCATTAAGCGTGAGCAAGCAGTGGAAAAGAAG...AAGGAGTGCCTCACAAATCTGGGATGCAGACCAAACGGCCAGACTTGTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR TCA 72 bp ATTGGTCCTAACTGTGGCATCAGAACACTCCCCATCTaGAGAGTCACAGTCCGATTCTTCAAACTGCATGGG +
Preference number: 3 (lower is better)
Translates to: IGPNCGIRTLPI*RVTVRFFKLHG
Trigger: CCCATGCAGTTTGAAGAATCGGACTGTGACTCTTCAGATGGGGAGTGTTCTGATGCCACAGTTAGGACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CCA 72 bp TGCTTGAATCAATATGACTCAAGTAGACAAGCAACCTaGCTCCAGAGAGGGGTGGTTCCATCTTCTCCTCGT +
Preference number: 3 (lower is better)
Translates to: CLNQYDSSRQAT*LQRGVVPSSPR
Trigger: ACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATATTGATTCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp TTTGATAGTCATTCTTGTTCCCATTGCCGTTCAATACAGAGAGGGAGCCGGCATCCTCATGTTTCTCTGTaGCCACTAAAGGTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: FDSHSCSHCRSIQRGSRHPHVSL*PLKVGK
Trigger: CTTGCCCACCTTTAGTGGCAACAGAGAAACATGAGG...ATGCCGGCTCCCTCTCTGTATTGAACGGCAATGGGAACAAGAATGACTATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 72 bp GAGACAGTCGATCTGATCACCGAGACTGCTACTAAGTaGCTAATGGATGAGCAGCATGAATATGCTGGACAG +
Preference number: 3 (lower is better)
Translates to: ETVDLITETATK*LMDEQHEYAGQ
Trigger: CTGTCCAGCATATTCATGCTGCTCATCCATTAGTCACTTAGTAGCAGTCTCGGTGATCAGATCGACTGTCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 72 bp GCACCTGGTAGGAAGTTTCCCAACTTACCTGAGACTTaGAGTAAGTTTCTTGTGGGGTGGCAAGTACATCTG +
Preference number: 3 (lower is better)
Translates to: APGRKFPNLPET*SKFLVGWQVHL
Trigger: CAGATGTACTTGCCACCCCACAAGAAACTTACTTCAAGTCTCAGGTAAGTTGGGAAACTTCCTACCAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR CCA 72 bp CTTTTTAACTATATGTCCATCCACTATTTGACATCCTaGGGGTCATCGGCCCACCCAGGAGCTTTCATGATC +
Preference number: 3 (lower is better)
Translates to: LFNYMSIHYLTS*GSSAHPGAFMI
Trigger: GATCATGAAAGCTCCTGGGTGGGCCGATGACCCCCAGGATGTCAAATAGTGGATGGACATATAGTTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp ACAGAGAAATTCTCAGAGCTAAAGGTTGAATATGACTaGCAGCTGCTGATACAGCGATGGGGCCTCTGTCTT +
Preference number: 3 (lower is better)
Translates to: TEKFSELKVEYD*QLLIQRWGLCL
Trigger: AAGACAGAGGCCCCATCGCTGTATCAGCAGCTGCCAGTCATATTCAACCTTTAGCTCTGAGAATTTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR-3UTR CAA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCTGGTCTGTTCACAAGTaGCCTGGAATTGCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLWSVHK*PGIAFL
Trigger: AAGAAAAGCAATTCCAGGCAACTTGTGAACAGACCA...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 72 bp TTGCAAACTATGTTGTCAATTCTTGAAACGAATCCATaGGCCCTGTGCGGAAACCCTCTAGGTCTGTTCCTC +
Preference number: 3 (lower is better)
Translates to: LQTMLSILETNP*ALCGNPLGLFL
Trigger: GAGGAACAGACCTAGAGGGTTTCCGCACAGGGCTCATGGATTCGTTTCAAGAATTGACAACATAGTTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 72 bp CTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATaGTCAATACATAATGTTGGTCTTGGTCTTGGAGGT +
Preference number: 3 (lower is better)
Translates to: LRLCLGSVGKIR*SIHNVGLGLGG
Trigger: ACCTCCAAGACCAAGACCAACATTATGTATTGAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCACAAGGAAATGGCACTaGAGTATGAAAGATCAACAC +
Preference number: 3 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLTRKWH*SMKDQH
Trigger: GTGTTGATCTTTCATACTCAAGTGCCATTTCCTTGT...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp ATTTTGAATCCATCAGGGCAAGTGGAAGGAACTGGAAGGTGGAGGCTGTTGCTTAACTTCCTCAAATGCTaGATATCCGTCTCATTCTGT +
Preference number: 3 (lower is better)
Translates to: ILNPSGQVEGTGRWRLLLNFLKC*ISVSFC
Trigger: ACAGAATGAGACGGATATCAAGCATTTGAGGAAGTT...AAGCAACAGCCTCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR GCA 72 bp TTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTaGAGCTCATTTCTAGGGGGTGGTAAAGATGGGGTA +
Preference number: 3 (lower is better)
Translates to: FPEICEVSCSCY*SSFLGGGKDGV
Trigger: TACCCCATCTTTACCACCCCCTAGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
3UTR GCA 72 bp ATCACCTCCAGGGCAGCAAGGGGCAAGATCTCATCATaGTCCTCAGAATGCTGTGCAATTAAAATTTATGAA +
Preference number: 3 (lower is better)
Translates to: ITSRAARGKISS*SSECCAIKIYE
Trigger: TTCATAAATTTTAATTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 72 bp GCATTTGTTTGCTTTGATAGTCATTCTTGTTCCCATTaGCGTTCAATACAGAGAGGGAGCCGGCATCAGAAA +
Preference number: 3 (lower is better)
Translates to: AFVCFDSHSCSH*RSIQRGSRHQK
Trigger: TTTCTGATGCCGGCTCCCTCTCTGTATTGAACGGCAATGGGAACAAGAATGACTATCAAAGCAAACAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp GTGAATCTAGAGAGGTTGTTTGACGGTAATCTGTCTTaGAGACAGGGACAGGTACTAGGTCAACACCTATTT +
Preference number: 3 (lower is better)
Translates to: VNLERLFDGNLS*RQGQVLGQHLF
Trigger: AAATAGGTGTTGACCTAGTACCTGTCCCTGTCTCCAAGACAGATTACCGTCAAACAACCTCTCTAGATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp ATGCATTTATTCTTAAAGGATGCCAATGTTCCACAGTaGGAGAGGGCATTTAAAATAGTCTGGAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: MHLFLKDANVPQ*ERAFKIVWRLG
Trigger: GCCCAGCCTCCAGACTATTTTAAATGCCCTCTCCCACTGTGGAACATTGGCATCCTTTAAGAATAAATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp TTTGATAGTCATTCTTGTTCCCATTGCCGTTCAATACAGAGAGGGAGCCGGCATAGTCTGTTCTCCTGCTaGAATCAATATGACTCAAGT +
Preference number: 3 (lower is better)
Translates to: FDSHSCSHCRSIQRGSRHSLFSC*NQYDSS
Trigger: ACTTGAGTCATATTGATTCAAGCAGGAGAACAGACT...ATGCCGGCTCCCTCTCTGTATTGAACGGCAATGGGAACAAGAATGACTATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 72 bp TTTCCATCAATGAAGCAGCTTGAAATCACAGTCTTGTaGGGTTCCTGGAAGCACTGTTGTAACACACTTGTC +
Preference number: 3 (lower is better)
Translates to: FPSMKQLEITVL*GSWKHCCNTLV
Trigger: GACAAGTGTGTTACAACAGTGCTTCCAGGAACCTCACAAGACTGTGATTTCAAGCTGCTTCATTGATGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 72 bp GACGCTAACGGAACATGGACATTCATCCCAAGATGGTaGAACTTTCCATCAATGAAGCAGCTTGAAATCACA +
Preference number: 3 (lower is better)
Translates to: DANGTWTFIPRW*NFPSMKQLEIT
Trigger: TGTGATTTCAAGCTGCTTCATTGATGGAAAGTTTCACCATCTTGGGATGAATGTCCATGTTCCGTTAGCGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 72 bp CACATACATCCTAGCTGCCTTCAAAGTCTGTTCTCCTaGTTGAATCAATATGACTCAAGTAGACAAGCAACC +
Preference number: 3 (lower is better)
Translates to: HIHPSCLQSLFS*LNQYDSSRQAT
Trigger: GGTTGCTTGTCTACTTGAGTCATATTGATTCAAGCAGGAGAACAGACTTTGAAGGCAGCTAGGATGTATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 72 bp ATCAGTAAAACCCAGAGGAGCGGCAACATTTTCATGTaGATTGGAAATGGTTTAACAGCTGTCTGTGCAAGT +
Preference number: 3 (lower is better)
Translates to: ISKTQRSGNIFM*IGNGLTAVCAS
Trigger: ACTTGCACAGACAGCTGTTAAACCATTTCCAATGCACATGAAAATGTTGCCGCTCCTCTGGGTTTTACTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp GCTTTCATGATCAAGTCAAAATCACAATGTATCCATTaGGCTTCAGGGCAGAACATGCGTCCTCAGATGATT +
Preference number: 3 (lower is better)
Translates to: AFMIKSKSQCIH*ASGQNMRPQMI
Trigger: AATCATCTGAGGACGCATGTTCTGCCCTGAAGCCCAATGGATACATTGTGATTTTGACTTGATCATGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp TCCATGGGCACAGTATTCCATGATAATACAATAACATaGGGCCTGAGTACAAACACCCTTGAATGCGATGAT +
Preference number: 3 (lower is better)
Translates to: SMGTVFHDNTIT*GLSTNTLECDD
Trigger: ATCATCGCATTCAAGGGTGTTTGTACTCAGGCCCCATGTTATTGTATTATCATGGAATACTGTGCCCATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR-3UTR CAA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATAAAATGTTCAATGTCTaGCTCTGGCTCTTCTTTAGT +
Preference number: 3 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYKMFNV*LWLFFS
Trigger: ACTAAAGAAGAGCCAGAGCAAGACATTGAACATTTT...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCATGCAGTGAACTGAGATaGTGCCATTGCACTCTAGCC +
Preference number: 3 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSCSELR*CHCTLA
Trigger: GGCTAGAGTGCAATGGCACAATCTCAGTTCACTGCA...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATCCTGCTCAGCATCCCTaGTTCTTTCCACAAATGTTC +
Preference number: 3 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYPAQHP*FFPQMF
Trigger: GAACATTTGTGGAAAGAACAAGGGATGCTGAGCAGG...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATTCCTGCCTTTCCTTTTaGGCTGATGCAATCAGTAAA +
Preference number: 3 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDSCLSF*ADAISK
Trigger: TTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGGA...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp TTTGATAGTCATTCTTGTTCCCATTGCCGTTCAATACAGAGAGGGAGCCGGCATGAAAAGAATGTCACATaGTTTTGGTACATGAGTCTC +
Preference number: 3 (lower is better)
Translates to: FDSHSCSHCRSIQRGSRHEKNVT*FWYMSL
Trigger: GAGACTCATGTACCAAAACAATGTGACATTCTTTTC...ATGCCGGCTCCCTCTCTGTATTGAACGGCAATGGGAACAAGAATGACTATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCAGAGAGGAGTTGCCTTTaGCAAGCTGCTTGTTTTTGC +
Preference number: 3 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSERSCL*QAACFC
Trigger: GCAAAAACAAGCAGCTTGCAAAAGGCAACTCCTCTC...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR-3UTR CAA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACTTATTTTCCAGAGATTaGCGAAGTCTCATGTTCCTG +
Preference number: 3 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYLFSRD*RSLMFL
Trigger: CAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 72 bp GGACTTTATTCAACTCTCGACTATACAATGAATGACTaGGATTCAGCCACTACGTACTACCCTAACATACTC +
Preference number: 3 (lower is better)
Translates to: GLYSTLDYTMND*DSATTYYPNIL
Trigger: GAGTATGTTAGGGTAGTACGTAGTGGCTGAATCTCAGTCATTCATTGTATAGTCGAGAGTTGAATAAAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 72 bp AACATTTTGCTGCCTGGAAAGGCACTAAATTCATACTaGCCGTACAAGTCAAAGTCTCGAAAAGAATGTCAC +
Preference number: 3 (lower is better)
Translates to: NILLPGKALNSY*PYKSKSRKECH
Trigger: GTGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTTCCAGGCAGCAAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR GCA 72 bp TTTCATGTGCATTGGAAATGGTTTAACAGCTGTCTGTaGAAGTATTTCCTAACGTCCAACATGATGCAGTGT +
Preference number: 3 (lower is better)
Translates to: FHVHWKWFNSCL*KYFLTSNMMQC
Trigger: ACACTGCATCATGTTGGACGTTAGGAAATACTTGCACAGACAGCTGTTAAACCATTTCCAATGCACATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR TCA 72 bp TTCAATATGGACTTTATTCAACTCTCGACTATACAATaGATGACTGAGATTCAGCCACTACGTACTACCCTA +
Preference number: 3 (lower is better)
Translates to: FNMDFIQLSTIQ*MTEIQPLRTTL
Trigger: TAGGGTAGTACGTAGTGGCTGAATCTCAGTCATTCATTGTATAGTCGAGAGTTGAATAAAGTCCATATTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CCA 72 bp ACAAGTCAAAGTCTCGAAAAGAATGTCACATTGTTTTaGTACATGAGTCTCACAGAGTCTAAGAAGCAAGTA +
Preference number: 3 (lower is better)
Translates to: TSQSLEKNVTLF*YMSLTESKKQV
Trigger: TACTTGCTTCTTAGACTCTGTGAGACTCATGTACCAAAACAATGTGACATTCTTTTCGAGACTTTGACTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp CTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCTTGGGCTCCGCAGGGCTaGTGCTGGGCCGAAATACCT +
Preference number: 4 (lower is better)
Translates to: LRRAAAGPKYLRLLAQVAWAPQG*CWAEIP
Trigger: AGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGCCCA...AGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp GCTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCTCAACACTGTTGTGGTaGCGGGGCTGTGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: APQGCCWAEIPQVVGAGCSTLLW*RGCARS
Trigger: AGAGCGTGCACAGCCCCGTCACCACAACAGTGTTGA...GCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACAGGAGGGGTGCCGAGATaGGAGGTGCCGAGGGATGAC +
Preference number: 4 (lower is better)
Translates to: GQSRRIARAQSSIPAWATGGVPR*EVPRDD
Trigger: GTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCC...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GCTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCATGACTGGCAGCTGCTaGTACAGCGATGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: APQGCCWAEIPQVVGAGCMTGSC*YSDGAS
Trigger: AGAGGCCCCATCGCTGTATCAGCAGCTGCCAGTCAT...GCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGGAGGGGTGCCGAGATaGGAGGTGCCGAGGGATGAC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGGGVPR*EVPRDD
Trigger: GTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTCTGAGCATGGTTGCTaGGTGGGCTCCGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGSEHGC*VGSAGL
Trigger: CAGCCCTGCGGAGCCCACTCAGCAACCATGCTCAGA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACCCGGGCAGCTGTCTCTaGGCATGGTTGCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDPGSCL*AWLLSG
Trigger: CCCACTCAGCAACCATGCTCAGAGACAGCTGCCCGG...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp CCTCCAGGGCAGCAAGGGGCAAGATCTCATCATGCTCCTCAGAATGCTGTGCAACCATGGCTGTGGAGATaGGGTCAGGGCTCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PPGQQGARSHHAPQNAVQPWLWR*GQGSSR
Trigger: CCGGCTCGAGCCCTGACCTCATCTCCACAGCCATGG...TTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTGGGCTCCGCAGGGCTaGTGCTGGGCCGAAATACCT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGWAPQG*CWAEIP
Trigger: AGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGCCCA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp CCACTCTTCTGCAGAGGCCTTGTTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGAGGTCCTCGAGCAGCTTaGGAGAAGGGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PLFCRGLVFRGSAGGVPRGPRAA*EKGGSP
Trigger: TGGGGAACCACCCTTCTCCCAAGCTGCTCGAGGACC...TCTCGGCACCCCTCCAGCGCTACCTCGAAAAACAAGGCCTCTGCAGAAGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp CTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCTCTGCTGATACAGCGATaGGGCCTCTGTCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LRRAAAGPKYLRLLAQVALLIQR*GLCLRG
Trigger: TCCACGAAGACAGAGGCCCCATCGCTGTATCAGCAG...AGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CAA 72 bp CTCACTTTCTTGATGGCCACCTCTTCCGCCCGGAACTaGCCCAAGAAGACCGCTCCTTGGGCTCCACTACCC +
Preference number: 4 (lower is better)
Translates to: LTFLMATSSARN*PKKTAPWAPLP
Trigger: GGGTAGTGGAGCCCAAGGAGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAGAGGTGGCCATCAAGAAAGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR CAA 72 bp CTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTaGTTGGCGCAGGTTGCTATGTCCTGTCCGTGCATA +
Preference number: 4 (lower is better)
Translates to: LRRAAAGPKYLR*LAQVAMSCPCI
Trigger: TATGCACGGACAGGACATAGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTCTGAGCATGGTTGCTaGGTGGGCTCCGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDISEHGC*VGSAGL
Trigger: CAGCCCTGCGGAGCCCACTCAGCAACCATGCTCAGA...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TCCAAGAGAGGATTATGTGCTGGTGACTTGGAAAGGTCAGGGCTCCTCCCCACTCCATGGCTGTGGAGATaGGGTCAGGGCTCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SKRGLCAGDLERSGLLPTPWLWR*GQGSSR
Trigger: CCGGCTCGAGCCCTGACCTCATCTCCACAGCCATGG...AGTGGGGAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAATCCTCTCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp TTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTGTGGTGACGGGGCTGTaGACGCTCTCGATTAGCTCT +
Preference number: 4 (lower is better)
Translates to: FFEVALEGCRDERCRGMTVVTGL*TLSISS
Trigger: AGAGCTAATCGAGAGCGTGCACAGCCCCGTCACCAC...AGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp GCCTCTGCTATTCCCTCGGCGGTGGCGTGGTTTGCTTCGATATCGGCTCTTGCTGGCGGTGGCGTGGTTTaGTTCGATATCGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ASAIPSAVAWFASISALAGGGVV*FDIGSC
Trigger: GCAAGAGCCGATATCGAAGCAAACCACGCCACCGCC...AGCAAGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp TTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTTGCCGAGATGAGAGGTaGCGAGGGATGACTCAGACC +
Preference number: 4 (lower is better)
Translates to: FFEVALEGCRDERCRGMTCRDER*RGMTQT
Trigger: GGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCA...AGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCCCTCGGCGGTGGCGTaGTTTGCTTCGATATCGGCT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGPSAVA*FASISA
Trigger: AGCCGATATCGAAGCAAACCACGCCACCGCCGAGGG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp CCTCCAGGGCAGCAAGGGGCAAGATCTCATCATGCTCCTCAGAATGCTGTGCAAAGCATGGTTGCTGAGTaGGCTCCGCAGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PPGQQGARSHHAPQNAVQSMVAE*APQGCC
Trigger: GCAGCAGCCCTGCGGAGCCCACTCAGCAACCATGCT...TTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGAGCATGGTTGCTGAGTaGGCTCCGCAGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FRITSGAIHATVPANDILSMVAE*APQGCC
Trigger: GCAGCAGCCCTGCGGAGCCCACTCAGCAACCATGCT...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACCCCCAGGGACCAGCTTaGCCCTTGTCAGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDPQGPA*PLSGSE
Trigger: TTCTGAGCCTGACAAGGGCCAAGCTGGTCCCTGGGG...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTGGCTGGGGTTCCCTTaGCCTGCAGTCACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGWLGFP*PAVTGG
Trigger: TCCTCCAGTGACTGCAGGCCAAGGGAACCCCAGCCA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGGTGGGGATCCCTTCTaGTCTCAACAAGTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGGGDPF*SQQVWP
Trigger: CGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTGTAAGTGGGATGGGGTaGATTTTCCTGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FFEVALEGCRDERCRGMTVSGMG*IFLGWL
Trigger: CAGCCAGCCCAGGAAAATTCACCCCATCCCACTTAC...AGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCCCGGGCAGCTGTCTCTaGGCATGGTTGCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIPGSCL*AWLLSG
Trigger: CCCACTCAGCAACCATGCTCAGAGACAGCTGCCCGG...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCCTGTGGTACCGCCCCTaGCAGCCACAGGTGGACACT +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEILWYRP*QPQVDT
Trigger: AGTGTCCACCTGTGGCTGTCAGGGGCGGTACCACAG...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACGTGGTGACGGGGCTGTaGACGCTCTCGATTAGCTCT +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDVVTGL*TLSISS
Trigger: AGAGCTAATCGAGAGCGTGCACAGCCCCGTCACCAC...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR GCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCCTCCGTCCACCGTGTTaGTGTTCCCCTGAGACACCG +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDILRPPC*CSPETP
Trigger: CGGTGTCTCAGGGGAACAGCAACACGGTGGACGGAG...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR GCA 90 bp GACTTCCGGACAAAGGGGATGCAGTGGGAGCCACTTCTGTGGTGGGGATCCCTTCGAATATCCAGCGCATaGCTGAGCTCTTCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: DFRTKGMQWEPLLWWGSLRISSA*LSSSLR
Trigger: GCGCAGAGAAGAGCTCAGGCATGCGCTGGATATTCG...AAGGGATCCCCACCACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGCTCCGCAGGGCTGCTaGTGGGCCGAAATACCTCAG +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIAPQGC*WAEIPQ
Trigger: CTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp AGAGCCCATCCGAGTGTGAGGATATGTCAATGGGAATCTCTGGCGTCTGGGACAGCTCCGCAGGGCTGCTaGTGGGCCGAAATACCTCAG +
Preference number: 4 (lower is better)
Translates to: RAHPSVRICQWESLASGTAPQGC*WAEIPQ
Trigger: CTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGC...TGTCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTCGGATGGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGGGTCCTCGAGCAGCTTaGGAGAAGGGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FRITSGAIHATVPANDILGPRAA*EKGGSP
Trigger: TGGGGAACCACCCTTCTCCCAAGCTGCTCGAGGACC...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGAAGAAGACCGCTCCTTaGGCTCCACTACCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGKKTAP*APLPSH
Trigger: GTGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTT...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000443863.5
CDS-3UTR CCA 90 bp GCCTCTGCTATTCCCTCGGCGGTGGCGTGGTTTGCTTCGATATCGGCTCTTGCTATTCCGTATCACCTCTaGCGCCATCCATGCGACCGT +
Preference number: 4 (lower is better)
Translates to: ASAIPSAVAWFASISALAIPYHL*RHPCDR
Trigger: ACGGTCGCATGGATGGCGCCAGAGGTGATACGGAAT...AGCAAGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGCAGGAGGGGGCTGCTaGTATTGCTGCTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGAGGGC*YCCCRE
Trigger: TTCTCTGCAGCAGCAATACCAGCAGCCCCCTCCTGC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp CTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTCAGACCTACAGCCGCAATACCTCAGGTTGTTaGCGCAGGTTGCTATGTCCT +
Preference number: 4 (lower is better)
Translates to: LEGCRDERCRGMTQTYSRNTSGC*RRLLCP
Trigger: AGGACATAGCAACCTGCGCCAACAACCTGAGGTATT...GCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCCCGCAGGGCTGCTGCTaGGCCGAAATACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDIPQGCC*AEIPQV
Trigger: AACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGG...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCAGCATGGTTGCTGAGTaGGCTCCGCAGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEISMVAE*APQGCC
Trigger: GCAGCAGCCCTGCGGAGCCCACTCAGCAACCATGCT...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
3UTR CAA 72 bp TGGCTGCCTCTGCTATTCCCTCGGCGGTGGCGTGGTTaGCTTCGATATCGGCTCTTGCTGCTAGAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: WLPLLFPRRWRG*LRYRLLLLEVD
Trigger: GTCCACTTCTAGCAGCAAGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CAA 72 bp CGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTaGGCGCAGGTTGCTATGTCCTGTCCGTGCATATTG +
Preference number: 4 (lower is better)
Translates to: RRAAAGPKYLRL*AQVAMSCPCIL
Trigger: CAATATGCACGGACAGGACATAGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTCAACACTGTTGTGGTaGCGGGGCTGTGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDISTLLW*RGCARS
Trigger: AGAGCGTGCACAGCCCCGTCACCACAACAGTGTTGA...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR TCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACCAGCCACTGCAGCTCTaGGATCTCCTCAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDQPLQL*DLLKWH
Trigger: GTGCCATTTGAGGAGATCTCAGAGCTGCAGTGGCTG...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTTGAGTCTGGGATGGTaGCTCTGGGACATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGLSLGW*LWDMAG
Trigger: TCCTGCCATGTCCCAGAGTCACCATCCCAGACTCAA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGGGGTGGGGTGGATCTaGAATGCCAGTATAGTCACG +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGGVGWI*NASIVT
Trigger: CGTGACTATACTGGCATTTCAGATCCACCCCACCCC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GGCAGGAGGGGGCTGCTGGTATTGCTGCTGCAGAGAATTATGGTGATGAAGAGACTCCGTCCACCGTGTTaGTGTTCCCCTGAGACACCG +
Preference number: 4 (lower is better)
Translates to: GRRGLLVLLLQRIMVMKRLRPPC*CSPETP
Trigger: CGGTGTCTCAGGGGAACAGCAACACGGTGGACGGAG...TCTCTTCATCACCATAATTCTCTGCAGCAGCAATACCAGCAGCCCCCTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCCACTACCCAGCCACTaGAGCTCTGAGATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGPLPSH*SSEISS
Trigger: TGAGGAGATCTCAGAGCTGCAGTGGCTGGGTAGTGG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000443863.5
CDS-3UTR GCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCGAATATCCAGCGCATaGCTGAGCTCTTCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGRISSA*LSSSLR
Trigger: GCGCAGAGAAGAGCTCAGGCATGCGCTGGATATTCG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GCGGTGGCGTGGTTTGCTTCGATATCGGCTCTTGCTGCTAGAAGTGGACATTTTGTAGCGCTGGAGGGGTaGCGAGATGAGAGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: AVAWFASISALAARSGHFVALEG*RDERCR
Trigger: TCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTAC...AAAATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAGCAAACCACGCCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCCCCTTTTCCTGCTaGTCCTCGAGCAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDIPFSC*SSSSLG
Trigger: TCCCAAGCTGCTCGAGGACCAGCAGGAAAAGGGGAT...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATTCCGTATCACCTCTaGCGCCATCCATGCGACCGT +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDIPYHL*RHPCDR
Trigger: ACGGTCGCATGGATGGCGCCAGAGGTGATACGGAAT...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTGGGAGCCACTTCTGTaGTGGGGATCCCTTCTGATC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGWEPLL*WGSLLI
Trigger: GATCAGAAGGGATCCCCACCACAGAAGTGGCTCCCA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGACAAAGGGGATGCAGTaGGAGCCACTTCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGTKGMQ*EPLLWW
Trigger: CCACCACAGAAGTGGCTCCCACTGCATCCCCTTTGT...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TCCAAGAGAGGATTATGTGCTGGTGACTTGGAAAGGTCAGGGCTCCTCCCCACTCCCTCGGCGGTGGCGTaGTTTGCTTCGATATCGGCT +
Preference number: 4 (lower is better)
Translates to: SKRGLCAGDLERSGLLPTPSAVA*FASISA
Trigger: AGCCGATATCGAAGCAAACCACGCCACCGCCGAGGG...AGTGGGGAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAATCCTCTCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCCTCGTAGGGCTCCTCCCCACTaGCTCAGCAGAGGGTATGTC +
Preference number: 4 (lower is better)
Translates to: SSRQATWLQRGVVPSSPRRAPPH*LSRGYV
Trigger: GACATACCCTCTGCTGAGCCAGTGGGGAGGAGCCCT...ACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TATGTCCTGTCCGTGCATATTGAGTCTGGGATGGTGACTCTGGGACATGGCAGGAGGGCTCCTCCCCACTaGCTCAGCAGAGGGTATGTC +
Preference number: 4 (lower is better)
Translates to: YVLSVHIESGMVTLGHGRRAPPH*LSRGYV
Trigger: GACATACCCTCTGCTGAGCCAGTGGGGAGGAGCCCT...CCTGCCATGTCCCAGAGTCACCATCCCAGACTCAATATGCACGGACAGGACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CAA 72 bp CCTCGGCGGTGGCGTGGTTTGCTTCGATATCGGCTCTaGCTGCTAGAAGTGGACATTTTGGGACTTCCGGAC +
Preference number: 4 (lower is better)
Translates to: PRRWRGLLRYRL*LLEVDILGLPD
Trigger: GTCCGGAAGTCCCAAAATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACCTAGCAATCGAGGTGTaGTCTTCCTGCCAGCTCGTA +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDLAIEV*SSCQLV
Trigger: TACGAGCTGGCAGGAAGATCACACCTCGATTGCTAG...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000439882.1
CDS-3UTR TCA 90 bp GCTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCCAATGTCTAAATGCATaGGTGTCTGCCGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: APQGCCWAEIPQVVGAGCQCLNA*VSAEKK
Trigger: CTTCTTTTCGGCAGACACTCATGCATTTAGACATTG...GCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TCCAAGAGAGGATTATGTGCTGGTGACTTGGAAAGGTCAGGGCTCCTCCCCACTGGTGGGGATCCCTTCTaGTCTCAACAAGTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: SKRGLCAGDLERSGLLPTGGDPF*SQQVWP
Trigger: CGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACC...AGTGGGGAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAATCCTCTCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGGTGGGGATCCCTTCTaGTCTCAACAAGTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIGGDPF*SQQVWP
Trigger: CGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCCTGTCCGTGCATATTaGGTCTGGGATGGTGACTCT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGPVRAY*VWDGDS
Trigger: AGAGTCACCATCCCAGACTCAATATGCACGGACAGG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp CCACTCTTCTGCAGAGGCCTTGTTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGAAGGATTATGTGCTGGTaGCTTGGAAAGGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PLFCRGLVFRGSAGGVPRRIMCW*LGKVRA
Trigger: AGCCCTGACCTTTCCAAGTCACCAGCACATAATCCT...TCTCGGCACCCCTCCAGCGCTACCTCGAAAAACAAGGCCTCTGCAGAAGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp AAGGGTATTGGGATTGAGCTTGGTGCAGGTAAGTGGGATGGGGTGAATTTTCCTGGAGGGGTGCCGAGATaGGAGGTGCCGAGGGATGAC +
Preference number: 4 (lower is better)
Translates to: KGIGIELGAGKWDGVNFPGGVPR*EVPRDD
Trigger: GTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCC...AGGAAAATTCACCCCATCCCACTTACCTGCACCAAGCTCAATCCCAATACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCATGACTGGCAGCTGCTaGTACAGCGATGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIMTGSC*YSDGAS
Trigger: AGAGGCCCCATCGCTGTATCAGCAGCTGCCAGTCAT...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCTTGCCCAGAGACATCTaGGTCTTCACACGGCGCACG +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEILPRDI*VFTRRT
Trigger: CGTGCGCCGTGTGAAGACTCAGATGTCTCTGGGCAA...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCCTTCAGTTCCGCTTGTaGTCTCTCCGTCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDILQFRL*SLRPPC
Trigger: ACACGGTGGACGGAGAGAGCACAAGCGGAACTGAAG...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR GCA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGCCACTACCCAGCCACTaGAGCTCTGAGATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FRITSGAIHATVPANDILPLPSH*SSEISS
Trigger: TGAGGAGATCTCAGAGCTGCAGTGGCTGGGTAGTGG...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR GCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACCCATCCATGCGACCGTaGCAGCAAATGACATCTTGG +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDPSMRP*QQMTSW
Trigger: CCAAGATGTCATTTGCTGGCACGGTCGCATGGATGG...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR GCA 90 bp CCTCCAGGGCAGCAAGGGGCAAGATCTCATCATGCTCCTCAGAATGCTGTGCAATCCGGACAAAGGGGATaGAGTGGGAGCCACTTCTGT +
Preference number: 4 (lower is better)
Translates to: PPGQQGARSHHAPQNAVQSGQRG*SGSHFC
Trigger: ACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGA...TTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGACATTTTGGGACTTCCGGACAAAGGGGATGCAGTGGGAGCCACTTCTGTGGTTCCGGACAAAGGGGATaGAGTGGGAGCCACTTCTGT +
Preference number: 4 (lower is better)
Translates to: GHFGTSGQRGCSGSHFCGSGQRG*SGSHFC
Trigger: ACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGA...ACCACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGAAGTCCCAAAATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCAAAGTCACTATGGCTaGCTCTGCTATTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGQSHYG*LCYSLG
Trigger: GCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGTTGTTGGCGCAGGTTaGTATGTCCTGTCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGVVGAG*YVLSVH
Trigger: ATGCACGGACAGGACATAGCAACCTGCGCCAACAAC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCCTCCACACACAGCTTaGCCAGAGACATCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGPPHTA*PETSES
Trigger: AGACTCAGATGTCTCTGGGCAAGCTGTGTGTGGAGG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACAGGTGCTCCTGAAAGTTaGCCATCGTGCCATGAGTAT +
Preference number: 4 (lower is better)
Translates to: GQSRRIARAQSSIPAWATGAPES*PSCHEY
Trigger: ATACTCATGGCACGATGGCCAACTTTCAGGAGCACC...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCAGCTTGGGAGAAGGGTaGTTCCCCATAGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDISLGEG*FPIAVS
Trigger: GCTCACAGCTATGGGGAACCACCCTTCTCCCAAGCT...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CCA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGAGCTTGGGAGAAGGGTaGTTCCCCATAGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: FRITSGAIHATVPANDILSLGEG*FPIAVS
Trigger: GCTCACAGCTATGGGGAACCACCCTTCTCCCAAGCT...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCATCCCCTTTTCCTGCTaGTCCTCGAGCAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDIIPFSC*SSSSLG
Trigger: TCCCAAGCTGCTCGAGGACCAGCAGGAAAAGGGGAT...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGAGCCACTTCTGTGGTaGGGATCCCTTCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGEPLLW*GSLLIS
Trigger: TGAGATCAGAAGGGATCCCCACCACAGAAGTGGCTC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCTATTCCCTCGGCGGTaGCGTGGTTTGCTTCGATAT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGLFPRR*RGLLRY
Trigger: ATATCGAAGCAAACCACGCCACCGCCGAGGGAATAG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGCAGGAGGGGGCTGCTaGTATTGCTGCTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIAGGGC*YCCCRE
Trigger: TTCTCTGCAGCAGCAATACCAGCAGCCCCCTCCTGC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGGACCCATACTGTTCTaGCCTGCACTGAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIGPILF*PALKAG
Trigger: CCCTGCCTTCAGTGCAGGCCAGAACAGTATGGGTCC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TCTGTGGTGGGGATCCCTTCTGATCTCAACAAGTCTGGCCGTTTGGTCTGCATCGGACCCATACTGTTCTaGCCTGCACTGAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVVGIPSDLNKSGRLVCIGPILF*PALKAG
Trigger: CCCTGCCTTCAGTGCAGGCCAGAACAGTATGGGTCC...GATGCAGACCAAACGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTATGTGCTGGTGACTTaGAAAGGTCAGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGYVLVT*KGQGSS
Trigger: GGAGGAGCCCTGACCTTTCCAAGTCACCAGCACATA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp CCTCCAGGGCAGCAAGGGGCAAGATCTCATCATGCTCCTCAGAATGCTGTGCAACTGCTGATACAGCGATaGGGCCTCTGTCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: PPGQQGARSHHAPQNAVQLLIQR*GLCLRG
Trigger: TCCACGAAGACAGAGGCCCCATCGCTGTATCAGCAG...TTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACAGTGAGGATATGTCAATaGGAATCTCTGGCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GQSRRIARAQSSIPAWATVRICQ*ESLASG
Trigger: CCCAGACGCCAGAGATTCCCATTGACATATCCTCAC...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACATATGGCCAAAAGACCTaGTCCCCTGTTCAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GQSRRIARAQSSIPAWATYGQKT*SPVQAA
Trigger: TGCTGCTTGAACAGGGGACCAGGTCTTTTGGCCATA...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCCCTGACAGCCACAGGTaGACACTAGTGCGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIPDSHR*TLVRAC
Trigger: ACAGGCTCGCACTAGTGTCCACCTGTGGCTGTCAGG...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACAAAGGTGAAGAGCCACTaGGGTGATATGGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: GQSRRIARAQSSIPAWATKVKSH*GDMGKM
Trigger: CATCTTGCCCATATCACCCCAGTGGCTCTTCACCTT...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTCTGAACAGACAGCATaGAACTACCAGCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGSEQTA*NYQQPP
Trigger: TGGCGGCTGCTGGTAGTTCCATGCTGTCTGTTCAGA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443863.5
3UTR CAA 72 bp CTTCTGAGGAGTCATCTCCACTCTTCTGCAGAGGCCTaGTTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: LLRSHLHSSAEA*FFEVALEGCRD
Trigger: ATCTCGGCACCCCTCCAGCGCTACCTCGAAAAACAAGGCCTCTGCAGAAGAGTGGAGATGACTCCTCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCCCTGTCCGTGCATATTaGGTCTGGGATGGTGACTCT +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDIPVRAY*VWDGDS
Trigger: AGAGTCACCATCCCAGACTCAATATGCACGGACAGG...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCTCTGAGCATGGTTGCTaGGTGGGCTCCGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLSEHGC*VGSAGL
Trigger: CAGCCCTGCGGAGCCCACTCAGCAACCATGCTCAGA...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGAGGATTATGTGCTGGTaGCTTGGAAAGGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGRIMCW*LGKVRA
Trigger: AGCCCTGACCTTTCCAAGTCACCAGCACATAATCCT...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp ATCTCAACAAGTCTGGCCGTTTGGTCTGCATCCCAGATTTGTGAGGCACTCCTTAGAGGTGCCGAGGGATaGCTCAGACCTACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: ISTSLAVWSASQICEALLRGAEG*LRPTAA
Trigger: AGCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCT...AAGGAGTGCCTCACAAATCTGGGATGCAGACCAAACGGCCAGACTTGTTGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp GCCTCTGCTATTCCCTCGGCGGTGGCGTGGTTTGCTTCGATATCGGCTCTTGCTCTCATCAGGACTGTTTaGGTGGTCACTGGTATTTCC +
Preference number: 4 (lower is better)
Translates to: ASAIPSAVAWFASISALALIRTV*VVTGIS
Trigger: GGAAATACCAGTGACCACTCAAACAGTCCTGATGAG...AGCAAGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGAGAACACTCCCCATCTaGAGAGTCACAGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGRTLPI*RVTVRF
Trigger: GAATCGGACTGTGACTCTTCAGATGGGGAGTGTTCT...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACAAAGGCCAAGGCACCATaGAGTACCTTGGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: GQSRRIARAQSSIPAWATKAKAP*STLECF
Trigger: AAAGCATTCCAAGGTACTTCATGGTGCCTTGGCCTT...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGACATTTTGGGACTTCCGGACAAAGGGGATGCAGTGGGAGCCACTTCTGTGGTCCATCCATGCGACCGTaGCAGCAAATGACATCTTGG +
Preference number: 4 (lower is better)
Translates to: GHFGTSGQRGCSGSHFCGPSMRP*QQMTSW
Trigger: CCAAGATGTCATTTGCTGGCACGGTCGCATGGATGG...ACCACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGAAGTCCCAAAATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp CCTCCAGGGCAGCAAGGGGCAAGATCTCATCATGCTCCTCAGAATGCTGTGCAAGGGGGCTGCTGGTATTaGTGCTGCAGAGAATTATGG +
Preference number: 4 (lower is better)
Translates to: PPGQQGARSHHAPQNAVQGGCWY*CCRELW
Trigger: CCATAATTCTCTGCAGCAGCAATACCAGCAGCCCCC...TTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp CCTCCAGGGCAGCAAGGGGCAAGATCTCATCATGCTCCTCAGAATGCTGTGCAAGTTGTTGGCGCAGGTTaGTATGTCCTGTCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: PPGQQGARSHHAPQNAVQVVGAG*YVLSVH
Trigger: ATGCACGGACAGGACATAGCAACCTGCGCCAACAAC...TTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTTGGGCTCCGCAGGGCTaGTGCTGGGCCGAAATACCT +
Preference number: 4 (lower is better)
Translates to: LASSSFSVGAPHHLANRSWAPQG*CWAEIP
Trigger: AGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGCCCA...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGACATTTTGGGACTTCCGGACAAAGGGGATGCAGTGGGAGCCACTTCTGTGGTCCTCCACACACAGCTTaGCCAGAGACATCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GHFGTSGQRGCSGSHFCGPPHTA*PETSES
Trigger: AGACTCAGATGTCTCTGGGCAAGCTGTGTGTGGAGG...ACCACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGAAGTCCCAAAATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACGGTGCTCCTGAAAGTTaGCCATCGTGCCATGAGTAT +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDGAPES*PSCHEY
Trigger: ATACTCATGGCACGATGGCCAACTTTCAGGAGCACC...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CCA 90 bp TCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCCTCGTATCCCCTTTTCCTGCTaGTCCTCGAGCAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SSRQATWLQRGVVPSSPRIPFSC*SSSSLG
Trigger: TCCCAAGCTGCTCGAGGACCAGCAGGAAAAGGGGAT...ACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCATTCCGTATCACCTCTaGCGCCATCCATGCGACCGT +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIIPYHL*RHPCDR
Trigger: ACGGTCGCATGGATGGCGCCAGAGGTGATACGGAAT...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TCCAAGAGAGGATTATGTGCTGGTGACTTGGAAAGGTCAGGGCTCCTCCCCACTACAAAGGGGATGCAGTaGGAGCCACTTCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SKRGLCAGDLERSGLLPTTKGMQ*EPLLWW
Trigger: CCACCACAGAAGTGGCTCCCACTGCATCCCCTTTGT...AGTGGGGAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAATCCTCTCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACACCGCAGGGCTGCTGCTaGGCCGAAATACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATPQGCC*AEIPQV
Trigger: AACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGG...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCCTCGTGGCTCCAGAGAGGGGTaGTTCCATCTTCTCCTCGTA +
Preference number: 4 (lower is better)
Translates to: SSRQATWLQRGVVPSSPRGSREG*FHLLLV
Trigger: TACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCC...ACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGTAATCCCAGTACTTTaGGAGGCCAAAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGVIPVL*EAKAGG
Trigger: TCCTCCTGCTTTGGCCTCCCAAAGTACTGGGATTAC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 72 bp CTTCGATATCGGCTCTTGCTGCTAGAAGTGGACATTTaGGGACTTCCGGACAAAGGGGATGCAGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LRYRLLLLEVDI*GLPDKGDAVGA
Trigger: GGCTCCCACTGCATCCCCTTTGTCCGGAAGTCCCAAAATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp CTTGCAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTGATCTTCCTGCCATCAACACTGTTGTGGTaGCGGGGCTGTGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: LAIPVDQSTSNRGVIFLPSTLLW*RGCARS
Trigger: AGAGCGTGCACAGCCCCGTCACCACAACAGTGTTGA...TGGCAGGAAGATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR TCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACTCGTGTTCCCTTAGCTaGAGAACGCTGTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDSCSLS*RTLFSN
Trigger: GTTTGAGAACAGCGTTCTTCAGCTAAGGGAACACGA...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGACCGTGCCAGCAAATaGCATCTTGGTACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGDRASK*HLGTFV
Trigger: GACAAAAGTACCAAGATGTCATTTGCTGGCACGGTC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTATGACTGGCAGCTGCTaGTACAGCGATGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSMTGSC*YSDGAS
Trigger: AGAGGCCCCATCGCTGTATCAGCAGCTGCCAGTCAT...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCTCATCAGGACTGTTTaGGTGGTCACTGGTATTTCC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGLIRTV*VVTGIS
Trigger: GGAAATACCAGTGACCACTCAAACAGTCCTGATGAG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTGCCCAGAGACATCTaGGTCTTCACACGGCGCACG +
Preference number: 4 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCLPRDI*VFTRRT
Trigger: CGTGCGCCGTGTGAAGACTCAGATGTCTCTGGGCAA...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp GGTTGCTATGTCCTGTCCGTGCATATTGAGTCTGGGATGGTGACTCTGGGACATGGGGTGGGGTGGATCTaGAATGCCAGTATAGTCACG +
Preference number: 4 (lower is better)
Translates to: GCYVLSVHIESGMVTLGHGVGWI*NASIVT
Trigger: CGTGACTATACTGGCATTTCAGATCCACCCCACCCC...ATGTCCCAGAGTCACCATCCCAGACTCAATATGCACGGACAGGACATAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCACCAAGCTGAAGTCTaGACAGACAGCATGGAACTA +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGHQAEV*TDSMEL
Trigger: TAGTTCCATGCTGTCTGTTCAGACTTCAGCTTGGTG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443863.5
CDS-3UTR GCA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTGTGGTGACGGGGCTGTaGACGCTCTCGATTAGCTCT +
Preference number: 4 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCVVTGL*TLSISS
Trigger: AGAGCTAATCGAGAGCGTGCACAGCCCCGTCACCAC...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR GCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTCCCGCATTTCTAGCTaGAGCATGATGGCACTCAAT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGSRISS*SMMALN
Trigger: ATTGAGTGCCATCATGCTGCAGCTAGAAATGCGGGA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGGGGGCTGCTGGTATTaGTGCTGCAGAGAATTATGG +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIGGCWY*CCRELW
Trigger: CCATAATTCTCTGCAGCAGCAATACCAGCAGCCCCC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TATGTCCTGTCCGTGCATATTGAGTCTGGGATGGTGACTCTGGGACATGGCAGGACTTCTCCAGCAGTCTaGAGCCATGGCTGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: YVLSVHIESGMVTLGHGRTSPAV*SHGCGD
Trigger: ATCTCCACAGCCATGGCTGCAGACTGCTGGAGAAGT...CCTGCCATGTCCCAGAGTCACCATCCCAGACTCAATATGCACGGACAGGACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATGTAGCGCTGGAGGGGTaGCGAGATGAGAGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYVALEG*RDERCR
Trigger: TCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTAC...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACGGGGTGGATCTGAAATaGCAGTATAGTCACGAGATC +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDGVDLK*QYSHEI
Trigger: GATCTCGTGACTATACTGGCATTTCAGATCCACCCC...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACACATTCTTGTTCCCATTaGCGTTCAATACAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GQSRRIARAQSSIPAWATHSCSH*RSIQRG
Trigger: CCCTCTCTGTATTGAACGGCAATGGGAACAAGAATG...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGACATTTTGGGACTTCCGGACAAAGGGGATGCAGTGGGAGCCACTTCTGTGGTGGTGCTCCTGAAAGTTaGCCATCGTGCCATGAGTAT +
Preference number: 4 (lower is better)
Translates to: GHFGTSGQRGCSGSHFCGGAPES*PSCHEY
Trigger: ATACTCATGGCACGATGGCCAACTTTCAGGAGCACC...ACCACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGAAGTCCCAAAATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTCTCAAACTGGTCCCTaGAATCCTCACTTACGCTCG +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDISQTGP*NPHLRS
Trigger: CGAGCGTAAGTGAGGATTCCAGGGACCAGTTTGAGA...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACACGCTGTTCTCAAACTaGTCCCTGGAATCCTCACTT +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDTLFSN*SLESSL
Trigger: AAGTGAGGATTCCAGGGACCAGTTTGAGAACAGCGT...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTAAGAAGACCGCTCCTTaGGCTCCACTACCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSKKTAP*APLPSH
Trigger: GTGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTT...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp CTTGCAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTGATCTTCCTGCCAAAGAAGACCGCTCCTTaGGCTCCACTACCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LAIPVDQSTSNRGVIFLPKKTAP*APLPSH
Trigger: GTGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTT...TGGCAGGAAGATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CCA 90 bp GGACATTTTGGGACTTCCGGACAAAGGGGATGCAGTGGGAGCCACTTCTGTGGTATCCATCAGGGCAAGTaGAAGGAACTGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GHFGTSGQRGCSGSHFCGIHQGK*KELEGG
Trigger: TCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGAT...ACCACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGAAGTCCCAAAATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGAAGTTTCTTGTGGGGTaGCAAGTACATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGKFLVG*QVHLQR
Trigger: CCTCTGCAGATGTACTTGCCACCCCACAAGAAACTT...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGAGCCACTTCTGTGGTaGGGATCCCTTCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIEPLLW*GSLLIS
Trigger: TGAGATCAGAAGGGATCCCCACCACAGAAGTGGCTC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGAATACCTCAGGTTGTTaGCGCAGGTTGCTATGTCCT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGNTSGC*RRLLCP
Trigger: AGGACATAGCAACCTGCGCCAACAACCTGAGGTATT...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCCCCCAGGGACCAGCTTaGCCCTTGTCAGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLPQGPA*PLSGSE
Trigger: TTCTGAGCCTGACAAGGGCCAAGCTGGTCCCTGGGG...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCTATGTGCTGGTGACTTaGAAAGGTCAGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIYVLVT*KGQGSS
Trigger: GGAGGAGCCCTGACCTTTCCAAGTCACCAGCACATA...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACAGTTTTCTCAGAACTCTaGGCGTTTTCCAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GQSRRIARAQSSIPAWATVFSEL*AFSKRG
Trigger: TCCTCTCTTGGAAAACGCCCAGAGTTCTGAGAAAAC...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAGGAATCTCTGGCGTCTaGGACAGCAGGTCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATGISGV*DSRSSS
Trigger: GCTAGACGACCTGCTGTCCCAGACGCCAGAGATTCC...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp AGGATTTTGAATCCATCAGGGCAAGTGGAAGGAACTGGAAGGTGGAGGCTGTTGGGAATCTCTGGCGTCTaGGACAGCAGGTCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: RILNPSGQVEGTGRWRLLGISGV*DSRSSS
Trigger: GCTAGACGACCTGCTGTCCCAGACGCCAGAGATTCC...CAACAGCCTCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACACAGGGAGCTCCCAAATaGGAATTCCATTTTCATTCC +
Preference number: 4 (lower is better)
Translates to: GQSRRIARAQSSIPAWATQGAPK*EFHFHS
Trigger: GGAATGAAAATGGAATTCCCATTTGGGAGCTCCCTG...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TCATCTCCACTCTTCTGCAGAGGCCTTGTTTTTCGAGGTAGCGCTGGAGGGGTGTTTGGGACAGAGTTCTaGCTTAAGAGAGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SSPLFCRGLVFRGSAGGVFGTEF*LKRGLQ
Trigger: TTGGAGCCCTCTCTTAAGTCAGAACTCTGTCCCAAA...CACCCCTCCAGCGCTACCTCGAAAAACAAGGCCTCTGCAGAAGAGTGGAGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTTGGGACAGAGTTCTaGCTTAAGAGAGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDIFGTEF*LKRGLQ
Trigger: TTGGAGCCCTCTCTTAAGTCAGAACTCTGTCCCAAA...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR TCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACCACTGCCTGACCTGCTaGACTGAATCTTTATGTCTT +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDHCLTC*TESLCL
Trigger: AAGACATAAAGATTCAGTTCAGCAGGTCAGGCAGTG...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438053.5
ENST00000439882.1
CDS-3UTR TCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCGACCGTGCCAGCAAATaGCATCTTGGTACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDIDRASK*HLGTFV
Trigger: GACAAAAGTACCAAGATGTCATTTGCTGGCACGGTC...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR TCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACACAATGTCTAAATGCATaGGTGTCTGCCGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GQSRRIARAQSSIPAWATQCLNA*VSAEKK
Trigger: CTTCTTTTCGGCAGACACTCATGCATTTAGACATTG...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTTTCTAGCTGCAGCATaGTGGCACTCAATTCCATGT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGFLAAA*WHSIPC
Trigger: ACATGGAATTGAGTGCCATCATGCTGCAGCTAGAAA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCAGGATTATGTGCTGGTaGCTTGGAAAGGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIRIMCW*LGKVRA
Trigger: AGCCCTGACCTTTCCAAGTCACCAGCACATAATCCT...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCAGACCTACAGCCGCTaGATTCATTTTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGQTYSR*IHFLPF
Trigger: AAACGGAAGAAAATGAATTCAGCGGCTGTAGGTCTG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GGCAGGAGGGGGCTGCTGGTATTGCTGCTGCAGAGAATTATGGTGATGAAGAGAGAGCCCATCCGAGTGTaGGGATATGTCAATGGGAAT +
Preference number: 4 (lower is better)
Translates to: GRRGLLVLLLQRIMVMKREPIRV*GYVNGN
Trigger: ATTCCCATTGACATATCCTCACACTCGGATGGGCTC...TCTCTTCATCACCATAATTCTCTGCAGCAGCAATACCAGCAGCCCCCTCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGAGCCCATCCGAGTGTaGGGATATGTCAATGGGAAT +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIEPIRV*GYVNGN
Trigger: ATTCCCATTGACATATCCTCACACTCGGATGGGCTC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GGCAGGAGGGGGCTGCTGGTATTGCTGCTGCAGAGAATTATGGTGATGAAGAGAAGAACACTCCCCATCTaGAGAGTCACAGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: GRRGLLVLLLQRIMVMKRRTLPI*RVTVRF
Trigger: GAATCGGACTGTGACTCTTCAGATGGGGAGTGTTCT...TCTCTTCATCACCATAATTCTCTGCAGCAGCAATACCAGCAGCCCCCTCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCCACCAAGCTGAAGTCTaGACAGACAGCATGGAACTA +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDIHQAEV*TDSMEL
Trigger: TAGTTCCATGCTGTCTGTTCAGACTTCAGCTTGGTG...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR GCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTACCATCCCCTTTTCCTaGTGGTCCTCGAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSTIPFS*WSSSSL
Trigger: CAAGCTGCTCGAGGACCAGCAGGAAAAGGGGATGGT...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACACTTCAGTTCCGCTTGTaGTCTCTCCGTCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATLQFRL*SLRPPC
Trigger: ACACGGTGGACGGAGAGAGCACAAGCGGAACTGAAG...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTCTTCAGTTCCGCTTGTaGTCTCTCCGTCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCLQFRL*SLRPPC
Trigger: ACACGGTGGACGGAGAGAGCACAAGCGGAACTGAAG...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR GCA 90 bp TGGGGCCTGAGTACAAACACCCTTGAATGCGATGATGTTAGGGTGCTTCAACTTCTTCCGCCCGGAACTTaGCCAAGAAGACCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: WGLSTNTLECDDVRVLQLLPPGT*PRRPLL
Trigger: AAGGAGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAG...AAGTTGAAGCACCCTAACATCATCGCATTCAAGGGTGTTTGTACTCAGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR GCA 90 bp TATGTCCTGTCCGTGCATATTGAGTCTGGGATGGTGACTCTGGGACATGGCAGGGCTATGTCCTGTCCGTaGATATTGAGTCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: YVLSVHIESGMVTLGHGRAMSCP*ILSLGW
Trigger: CCATCCCAGACTCAATATGCACGGACAGGACATAGC...CCTGCCATGTCCCAGAGTCACCATCCCAGACTCAATATGCACGGACAGGACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATGGTCCTCGAGCAGCTTaGGAGAAGGGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYGPRAA*EKGGSP
Trigger: TGGGGAACCACCCTTCTCCCAAGCTGCTCGAGGACC...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGCAGGAGGGGGCTGCTGGTATTGCTGCTGCAGAGAATTATGGTGATGAAGAGATCTCAAACTGGTCCCTaGAATCCTCACTTACGCTCG +
Preference number: 4 (lower is better)
Translates to: GRRGLLVLLLQRIMVMKRSQTGP*NPHLRS
Trigger: CGAGCGTAAGTGAGGATTCCAGGGACCAGTTTGAGA...TCTCTTCATCACCATAATTCTCTGCAGCAGCAATACCAGCAGCCCCCTCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGACGCTGTTCTCAAACTaGTCCCTGGAATCCTCACTT +
Preference number: 4 (lower is better)
Translates to: FRITSGAIHATVPANDILTLFSN*SLESSL
Trigger: AAGTGAGGATTCCAGGGACCAGTTTGAGAACAGCGT...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCACTTGCAATTCCTGTaGACCAGTCTACTAGCAATC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGHLQFL*TSLLAI
Trigger: GATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp AGAGCCCATCCGAGTGTGAGGATATGTCAATGGGAATCTCTGGCGTCTGGGACAGAAGGAACTGGAAGGTaGAGGCTGTTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: RAHPSVRICQWESLASGTEGTGR*RLLLPT
Trigger: TGTTGGAAGCAACAGCCTCCACCTTCCAGTTCCTTC...TGTCCCAGACGCCAGAGATTCCCATTGACATATCCTCACACTCGGATGGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp GGTTGCTATGTCCTGTCCGTGCATATTGAGTCTGGGATGGTGACTCTGGGACATGCAAGTGGAAGGAACTaGAAGGTGGAGGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: GCYVLSVHIESGMVTLGHASGRN*KVEAVA
Trigger: AGCAACAGCCTCCACCTTCCAGTTCCTTCCACTTGC...ATGTCCCAGAGTCACCATCCCAGACTCAATATGCACGGACAGGACATAGCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGGGCCTCTGTCTTCGTaGAAATTCAACTTCACTATC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGGPLSS*KFNFTI
Trigger: GATAGTGAAGTTGAATTTCCACGAAGACAGAGGCCC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTCAGGACTGTTTGAGTaGTCACTGGTATTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGSGLFE*SLVFPS
Trigger: AGAGGGAAATACCAGTGACCACTCAAACAGTCCTGA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAGTCAATGGGAATCTCTaGCGTCTGGGACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATVNGNL*RLGQQV
Trigger: GACCTGCTGTCCCAGACGCCAGAGATTCCCATTGAC...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGTGAGGATATGTCAATaGGAATCTCTGGCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIVRICQ*ESLASG
Trigger: CCCAGACGCCAGAGATTCCCATTGACATATCCTCAC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAGTGGGTAGAGGCAAGTaGCCTTTCCCCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATVGRGK*PFPFLW
Trigger: CCACAGAAAGGGGAAAGGCCACTTGCCTCTACCCAC...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCCTCGTAGGGTGGGACACTGGTaGTGTGAGTATGCTAGGATA +
Preference number: 4 (lower is better)
Translates to: SSRQATWLQRGVVPSSPRRVGHW*CEYARI
Trigger: TATCCTAGCATACTCACACCACCAGTGTCCCACCCT...ACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTAGGACCCTGTCCACCTaGTCACTGGACAGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: LASSSFSVGAPHHLANRSRTLST*SLDSSL
Trigger: TAGGCTGCTGTCCAGTGACCAGGTGGACAGGGTCCT...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp AAGTCTGAACAGACAGCATGGAACTACCAGCAGCCGCCAGTTTCCTCACAGACTCCGATGGCTGGGCTTTaGTTTCCGAGGGGATTTCTT +
Preference number: 4 (lower is better)
Translates to: KSEQTAWNYQQPPVSSQTPMAGL*FPRGFL
Trigger: AAGAAATCCCCTCGGAAACCAAAGCCCAGCCATCGG...AGTCTGTGAGGAAACTGGCGGCTGCTGGTAGTTCCATGCTGTCTGTTCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR CCA 90 bp AAGCTGAAGTCTGAACAGACAGCATGGAACTACCAGCAGCCGCCAGTTTCCTCAAAAATCTCCGATGGCTaGGCTTTGGTTTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: KLKSEQTAWNYQQPPVSSKISDG*ALVSEG
Trigger: CCCCTCGGAAACCAAAGCCCAGCCATCGGAGATTTT...TGAGGAAACTGGCGGCTGCTGGTAGTTCCATGCTGTCTGTTCAGACTTCAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR TCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACACCAAAGTCCTGAGATaGCACTCAGAAGATTTTTGG +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDTKVLR*HSEDFW
Trigger: CCAAAAATCTTCTGAGTGTCATCTCAGGACTTTGGT...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR TCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATTCAACACTGTTGTGGTaGCGGGGCTGTGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYSTLLW*RGCARS
Trigger: AGAGCGTGCACAGCCCCGTCACCACAACAGTGTTGA...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TCTGTGGTGGGGATCCCTTCTGATCTCAACAAGTCTGGCCGTTTGGTCTGCATCTCGTGTTCCCTTAGCTaGAGAACGCTGTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SVVGIPSDLNKSGRLVCISCSLS*RTLFSN
Trigger: GTTTGAGAACAGCGTTCTTCAGCTAAGGGAACACGA...GATGCAGACCAAACGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCCAGCCACTGCAGCTCTaGGATCTCCTCAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLQPLQL*DLLKWH
Trigger: GTGCCATTTGAGGAGATCTCAGAGCTGCAGTGGCTG...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTCTAGCAATCGAGGTGTaGTCTTCCTGCCAGCTCGTA +
Preference number: 4 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCLAIEV*SSCQLV
Trigger: TACGAGCTGGCAGGAAGATCACACCTCGATTGCTAG...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR TCA 90 bp GCCACTTCTGTGGTGGGGATCCCTTCTGATCTCAACAAGTCTGGCCGTTTGGTCATTCAGCCTGAGACTTaGAGTAAGTTTCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ATSVVGIPSDLNKSGRLVIQPET*SKFLVG
Trigger: CCCCACAAGAAACTTACTTCAAGTCTCAGGCTGAAT...GACCAAACGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACCACAGAAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TCTGTGGTGGGGATCCCTTCTGATCTCAACAAGTCTGGCCGTTTGGTCTGCATCTGCATCCCAGATTTGTaGGGCACTCCTTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SVVGIPSDLNKSGRLVCICIPDL*GTPFLF
Trigger: GAAAAGGAAAGGAGTGCCTCACAAATCTGGGATGCA...GATGCAGACCAAACGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCGTAAGTGGGATGGGGTaGATTTTCCTGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLVSGMG*IFLGWL
Trigger: CAGCCAGCCCAGGAAAATTCACCCCATCCCACTTAC...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTTTGAGTCTGGGATGGTaGCTCTGGGACATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LASSSFSVGAPHHLANRSLSLGW*LWDMAG
Trigger: TCCTGCCATGTCCCAGAGTCACCATCCCAGACTCAA...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp AAGGGTATTGGGATTGAGCTTGGTGCAGGTAAGTGGGATGGGGTGAATTTTCCTTTGAGTCTGGGATGGTaGCTCTGGGACATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KGIGIELGAGKWDGVNFPLSLGW*LWDMAG
Trigger: TCCTGCCATGTCCCAGAGTCACCATCCCAGACTCAA...AGGAAAATTCACCCCATCCCACTTACCTGCACCAAGCTCAATCCCAATACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGATCCCTGCCATTCTTaGTTGAAATGTTCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGDPCHS*LKCSVR
Trigger: TCTCACTGAACATTTCAATCAAGAATGGCAGGGATC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGAAATCACAGTCTTGTaGGGTTCCTGGAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIEITVL*GSWKHC
Trigger: ACAGTGCTTCCAGGAACCTCACAAGACTGTGATTTC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GAGTTCTCTATCTGTTTAGTAGCACCTGGTAGGAAGTTTCCCAACTTACCTGAGCTCCGTCCACCGTGTTaGTGTTCCCCTGAGACACCG +
Preference number: 4 (lower is better)
Translates to: EFSICLVAPGRKFPNLPELRPPC*CSPETP
Trigger: CGGTGTCTCAGGGGAACAGCAACACGGTGGACGGAG...CTCAGGTAAGTTGGGAAACTTCCTACCAGGTGCTACTAAACAGATAGAGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR GCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGACAAACACCCTTGAATaGGATGATGTTAGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGTNTLE*DDVRVL
Trigger: AAGCACCCTAACATCATCGCATTCAAGGGTGTTTGT...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000443863.5
CDS-3UTR GCA 90 bp GAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTCCATCCATGCGACCGTaGCAGCAAATGACATCTTGG +
Preference number: 4 (lower is better)
Translates to: ECLPKRRSVSRFTLPRLFPSMRP*QQMTSW
Trigger: CCAAGATGTCATTTGCTGGCACGGTCGCATGGATGG...AAACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR GCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGAAATGCATGAGTGTCTaGCGAAAAGAAGGTCGGTTT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGKCMSV*RKEGRF
Trigger: AAACCGACCTTCTTTTCGGCAGACACTCATGCATTT...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGAGGCAATGTCTAAATaGATGAGTGTCTGCCGAAAA +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGEAMSK*MSVCRK
Trigger: TTTTCGGCAGACACTCATGCATTTAGACATTGCCTC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp ATCTCAACAAGTCTGGCCGTTTGGTCTGCATCCCAGATTTGTGAGGCACTCCTTGGGGGCTGCTGGTATTaGTGCTGCAGAGAATTATGG +
Preference number: 4 (lower is better)
Translates to: ISTSLAVWSASQICEALLGGCWY*CCRELW
Trigger: CCATAATTCTCTGCAGCAGCAATACCAGCAGCCCCC...AAGGAGTGCCTCACAAATCTGGGATGCAGACCAAACGGCCAGACTTGTTGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTCATGTTCCTGTTATTaGAGCTCATTTCTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGSCSCY*SSFLGG
Trigger: ACCCCCTAGAAATGAGCTGCAATAACAGGAACATGA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp AAGGGTATTGGGATTGAGCTTGGTGCAGGTAAGTGGGATGGGGTGAATTTTCCTAGCTTGGGAGAAGGGTaGTTCCCCATAGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: KGIGIELGAGKWDGVNFPSLGEG*FPIAVS
Trigger: GCTCACAGCTATGGGGAACCACCCTTCTCCCAAGCT...AGGAAAATTCACCCCATCCCACTTACCTGCACCAAGCTCAATCCCAATACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCCACTTGCAATTCCTGTaGACCAGTCTACTAGCAATC +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDIHLQFL*TSLLAI
Trigger: GATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTG...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000439882.1
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCAAGTTTCTTGTGGGGTaGCAAGTACATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIKFLVG*QVHLQR
Trigger: CCTCTGCAGATGTACTTGCCACCCCACAAGAAACTT...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCTTTTCCTGGGCTGGCTaGTTTTTCAAGATTGCGGCA +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIFSWAG*FFKIAA
Trigger: TGCCGCAATCTTGAAAAACCAGCCAGCCCAGGAAAA...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TATGTCCTGTCCGTGCATATTGAGTCTGGGATGGTGACTCTGGGACATGGCAGGCTTGGTGCAGGTAAGTaGGATGGGGTGAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: YVLSVHIESGMVTLGHGRLGAGK*DGVNFP
Trigger: AGGAAAATTCACCCCATCCCACTTACCTGCACCAAG...CCTGCCATGTCCCAGAGTCACCATCCCAGACTCAATATGCACGGACAGGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGGTTTTCTCAGAACTCTaGGCGTTTTCCAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: FRITSGAIHATVPANDILVFSEL*AFSKRG
Trigger: TCCTCTCTTGGAAAACGCCCAGAGTTCTGAGAAAAC...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGATTCTTCAAACTGCATaGGGTTCTCATAGCCACGTT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGILQTA*GSHSHV
Trigger: AACGTGGCTATGAGAACCCCATGCAGTTTGAAGAAT...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCTGTTCCTACAGGAAGTaGTCAGCAGGCAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEICSYRK*SAGRKE
Trigger: TTCCTTTCTGCCTGCTGACCACTTCCTGTAGGAACA...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGTCTGGAGAGCAGACCTaGGATGCTGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLSGEQT*DAAGSF
Trigger: GAAGCTCCCGGCAGCATCCCAGGTCTGCTCTCCAGA...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTCTGAACAGACAGCATaGAACTACCAGCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCSEQTA*NYQQPP
Trigger: TGGCGGCTGCTGGTAGTTCCATGCTGTCTGTTCAGA...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
3UTR CAA 72 bp TGCTTGATATCCGTCTCATTCTGTTCTCTCACTTTCTaGATGGCCACCTCTTCCGCCCGGAACTTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: CLISVSFCSLTF*MATSSARNLPK
Trigger: CTTGGGCAAGTTCCGGGCGGAAGAGGTGGCCATCAAGAAAGTGAGAGAACAGAATGAGACGGATATCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR TCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCACCAAAGTCCTGAGATaGCACTCAGAAGATTTTTGG +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDITKVLR*HSEDFW
Trigger: CCAAAAATCTTCTGAGTGTCATCTCAGGACTTTGGT...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR TCA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGCCTGACCTGCTGAACTaGATCTTTATGTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: FRITSGAIHATVPANDILPDLLN*IFMSSV
Trigger: AACTGAAGACATAAAGATTCAGTTCAGCAGGTCAGG...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438053.5
ENST00000439882.1
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGACTTCCTCAAATGCTTaGTATCCGTCTCATTCTGTT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGTSSNA*YPSHSV
Trigger: AACAGAATGAGACGGATATCAAGCATTTGAGGAAGT...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000443863.5
CDS-3UTR TCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACAGATTTGAGATCACGATaGATAATTTTATGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GQSRRIARAQSSIPAWATDLRSR*IILWRC
Trigger: GCACCTCCATAAAATTATTCATCGTGATCTCAAATC...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCTTTCTAGCTGCAGCATaGTGGCACTCAATTCCATGT +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIFLAAA*WHSIPC
Trigger: ACATGGAATTGAGTGCCATCATGCTGCAGCTAGAAA...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACCATGGCTGTGGAGATaGGGTCAGGGCTCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSPWLWR*GQGSSR
Trigger: CCGGCTCGAGCCCTGACCTCATCTCCACAGCCATGG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAGGAGGGGTGCCGAGATaGGAGGTGCCGAGGGATGAC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSGGVPR*EVPRDD
Trigger: GTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCC...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTGAGCCCATCCGAGTGTaGGGATATGTCAATGGGAAT +
Preference number: 4 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSEPIRV*GYVNGN
Trigger: ATTCCCATTGACATATCCTCACACTCGGATGGGCTC...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATGGGGTGGGGTGGATCTaGAATGCCAGTATAGTCACG +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYGVGWI*NASIVT
Trigger: CGTGACTATACTGGCATTTCAGATCCACCCCACCCC...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp CCTCCAGGGCAGCAAGGGGCAAGATCTCATCATGCTCCTCAGAATGCTGTGCAAACAAGCTGGTTGAAGTaGATATGGTCTGTTCACAAG +
Preference number: 4 (lower is better)
Translates to: PPGQQGARSHHAPQNAVQTSWLK*IWSVHK
Trigger: CTTGTGAACAGACCATATTCACTTCAACCAGCTTGT...TTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCTTCAAGTAGCTAGATaGAGACGCCAGTTTACAATA +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGLQVAR*RRQFTI
Trigger: TATTGTAAACTGGCGTCTTCATCTAGCTACTTGAAG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGGAAAGTTGGCCATCGTaGCATGAGTATAACCAAAGT +
Preference number: 4 (lower is better)
Translates to: FRITSGAIHATVPANDILESWPS*HEYNQS
Trigger: ACTTTGGTTATACTCATGGCACGATGGCCAACTTTC...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR GCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCGAAAGTTGGCCATCGTaGCATGAGTATAACCAAAGT +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDIESWPS*HEYNQS
Trigger: ACTTTGGTTATACTCATGGCACGATGGCCAACTTTC...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR GCA 90 bp GCCTCTGCTATTCCCTCGGCGGTGGCGTGGTTTGCTTCGATATCGGCTCTTGCTGTAATCAGTGGAATATaGCTTCCCAATGATATTCCA +
Preference number: 4 (lower is better)
Translates to: ASAIPSAVAWFASISALAVISGI*LPNDIP
Trigger: TGGAATATCATTGGGAAGGCATATTCCACTGATTAC...AGCAAGAGCCGATATCGAAGCAAACCACGCCACCGCCGAGGGAATAGCAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACATTCAACTTCCTCAAATaGTTGATATCCGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: GQSRRIARAQSSIPAWATFNFLK*LISVSF
Trigger: GAATGAGACGGATATCAAGCATTTGAGGAAGTTGAA...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCAAATGCATGAGTGTCTaGCGAAAAGAAGGTCGGTTT +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDIKCMSV*RKEGRF
Trigger: AAACCGACCTTCTTTTCGGCAGACACTCATGCATTT...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR GCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCTTCTTTTCCACTGCTTaGTCACGCTTAATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIFFSTA*SRLMSS
Trigger: GGAGCTCATTAAGCGTGAGCAAGCAGTGGAAAAGAA...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATCACTATGGCTGCCTCTaGTATTCCCTCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDHYGCL*YSLGGG
Trigger: GCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTG...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp AGAATTATGGTGATGAAGAGAAGGGTATTGGGATTGAGCTTGGTGCAGGTAAGTCACTATGGCTGCCTCTaGTATTCCCTCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: RIMVMKRRVLGLSLVQVSHYGCL*YSLGGG
Trigger: GCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTG...ACTTACCTGCACCAAGCTCAATCCCAATACCCTTCTCTTCATCACCATAATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp ATTTTGAATCCATCAGGGCAAGTGGAAGGAACTGGAAGGTGGAGGCTGTTGCTTGTTGTTGGCGCAGGTTaGTATGTCCTGTCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: ILNPSGQVEGTGRWRLLLVVGAG*YVLSVH
Trigger: ATGCACGGACAGGACATAGCAACCTGCGCCAACAAC...AAGCAACAGCCTCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCTGGGAGATGGAGGTTaGAGTGAACTGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSLGDGG*SELRLC
Trigger: GCACAATCTCAGTTCACTGCAACCTCCATCTCCCAG...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTATCTGCTTAGGGCTCTaGTCTGTGAAGTCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSICLGL*SVKSCH
Trigger: ATGGCAGGACTTCACAGAGCAGAGCCCTAAGCAGAT...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TTTGATAGTCATTCTTGTTCCCATTGCCGTTCAATACAGAGAGGGAGCCGGCATAGTGGCCTTGCCATCTaGTTAGGGCTCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FDSHSCSHCRSIQRGSRHSGLAI*LGLCSV
Trigger: CACAGAGCAGAGCCCTAAGCAGATGGCAAGGCCACT...ATGCCGGCTCCCTCTCTGTATTGAACGGCAATGGGAACAAGAATGACTATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTCTAATAGCTTGCACATaGTGGCTGGGGTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LASSSFSVGAPHHLANRSLIACT*WLGFPW
Trigger: CCAAGGGAACCCCAGCCAGCATGTGCAAGCTATTAG...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTTCTCAAACTGGTCCCTaGAATCCTCACTTACGCTCG +
Preference number: 4 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSSQTGP*NPHLRS
Trigger: CGAGCGTAAGTGAGGATTCCAGGGACCAGTTTGAGA...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGATAATACAATAACATaGGGCCTGAGTACAAACACC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGDNTIT*GLSTNT
Trigger: GGTGTTTGTACTCAGGCCCCATGTTATTGTATTATC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTTTACCGCATCTGTGTaGGTCACTAAAACATTAGGT +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGFTASV*VTKTLG
Trigger: ACCTAATGTTTTAGTGACCCACACAGATGCGGTAAA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp AGGATTTTGAATCCATCAGGGCAAGTGGAAGGAACTGGAAGGTGGAGGCTGTTGGAAGGAACTGGAAGGTaGAGGCTGTTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: RILNPSGQVEGTGRWRLLEGTGR*RLLLPT
Trigger: TGTTGGAAGCAACAGCCTCCACCTTCCAGTTCCTTC...CAACAGCCTCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR CCA 90 bp TGGGGCCTGAGTACAAACACCCTTGAATGCGATGATGTTAGGGTGCTTCAACTTGCAAGTGGAAGGAACTaGAAGGTGGAGGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: WGLSTNTLECDDVRVLQLASGRN*KVEAVA
Trigger: AGCAACAGCCTCCACCTTCCAGTTCCTTCCACTTGC...AAGTTGAAGCACCCTAACATCATCGCATTCAAGGGTGTTTGTACTCAGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CCA 90 bp GCGGTGGCGTGGTTTGCTTCGATATCGGCTCTTGCTGCTAGAAGTGGACATTTTACAAGTCTGGCCGTTTaGTCTGCATCCCAGATTTGT +
Preference number: 4 (lower is better)
Translates to: AVAWFASISALAARSGHFTSLAV*SASQIC
Trigger: ACAAATCTGGGATGCAGACCAAACGGCCAGACTTGT...AAAATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAGCAAACCACGCCACCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TCTCTGCGCCTTCGAATCAGTTCTTCATCTAACCGGTGTATACAAGTTCCTTCAGCAGGAGGGGGCTGCTaGTATTGCTGCTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SLRLRISSSSNRCIQVPSAGGGC*YCCCRE
Trigger: TTCTCTGCAGCAGCAATACCAGCAGCCCCCTCCTGC...TGAAGGAACTTGTATACACCGGTTAGATGAAGAACTGATTCGAAGGCGCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGTTTTCTCAGAACTCTaGGCGTTTTCCAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIVFSEL*AFSKRG
Trigger: TCCTCTCTTGGAAAACGCCCAGAGTTCTGAGAAAAC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGGGCCTCTGTCTTCGTaGAAATTCAACTTCACTATC +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIGPLSS*KFNFTI
Trigger: GATAGTGAAGTTGAATTTCCACGAAGACAGAGGCCC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GAGCTTGGTGCAGGTAAGTGGGATGGGGTGAATTTTCCTGGGCTGGCTGGTTTTAAGGTTGAATATGACTaGCAGCTGCTGATACAGCGA +
Preference number: 4 (lower is better)
Translates to: ELGAGKWDGVNFPGLAGFKVEYD*QLLIQR
Trigger: TCGCTGTATCAGCAGCTGCCAGTCATATTCAACCTT...AAAACCAGCCAGCCCAGGAAAATTCACCCCATCCCACTTACCTGCACCAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TCTGTGGTGGGGATCCCTTCTGATCTCAACAAGTCTGGCCGTTTGGTCTGCATCTCAGGACTGTTTGAGTaGTCACTGGTATTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SVVGIPSDLNKSGRLVCISGLFE*SLVFPS
Trigger: AGAGGGAAATACCAGTGACCACTCAAACAGTCCTGA...GATGCAGACCAAACGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp CTGCTGGTATTGCTGCTGCAGAGAATTATGGTGATGAAGAGAAGGGTATTGGGAGTCAATGGGAATCTCTaGCGTCTGGGACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLVLLLQRIMVMKRRVLGVNGNL*RLGQQV
Trigger: GACCTGCTGTCCCAGACGCCAGAGATTCCCATTGAC...TCCCAATACCCTTCTCTTCATCACCATAATTCTCTGCAGCAGCAATACCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCTCACAATGTATCCATTaGGCTTCAGGGCAGAACATG +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEISQCIH*ASGQNM
Trigger: CATGTTCTGCCCTGAAGCCCAATGGATACATTGTGA...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATGTGAGGGTGGGACACTaGTGGTGTGAGTATGCTAGG +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYVRVGH*WCEYAR
Trigger: CCTAGCATACTCACACCACCAGTGTCCCACCCTCAC...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTTGGGACAGAGTTCTaGCTTAAGAGAGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCFGTEF*LKRGLQ
Trigger: TTGGAGCCCTCTCTTAAGTCAGAACTCTGTCCCAAA...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR TCA 90 bp GAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTTCGTGTTCCCTTAGCTaGAGAACGCTGTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: ECLPKRRSVSRFTLPRLFSCSLS*RTLFSN
Trigger: GTTTGAGAACAGCGTTCTTCAGCTAAGGGAACACGA...AAACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCCCTGACCTGCTGAACTaGATCTTTATGTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIPDLLN*IFMSSV
Trigger: AACTGAAGACATAAAGATTCAGTTCAGCAGGTCAGG...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000438053.5
CDS-3UTR TCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCACTTCCTCAAATGCTTaGTATCCGTCTCATTCTGTT +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDITSSNA*YPSHSV
Trigger: AACAGAATGAGACGGATATCAAGCATTTGAGGAAGT...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR TCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGATTTGAGATCACGATaGATAATTTTATGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGDLRSR*IILWRC
Trigger: GCACCTCCATAAAATTATTCATCGTGATCTCAAATC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAGACCGTGCCAGCAAATaGCATCTTGGTACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATDRASK*HLGTFV
Trigger: GACAAAAGTACCAAGATGTCATTTGCTGGCACGGTC...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCCAATGTCTAAATGCATaGGTGTCTGCCGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIQCLNA*VSAEKK
Trigger: CTTCTTTTCGGCAGACACTCATGCATTTAGACATTG...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCCATGGCTGTGGAGATaGGGTCAGGGCTCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHPWLWR*GQGSSR
Trigger: CCGGCTCGAGCCCTGACCTCATCTCCACAGCCATGG...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGATCCCTGCCATTCTTaGTTGAAATGTTCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIDPCHS*LKCSVR
Trigger: TCTCACTGAACATTTCAATCAAGAATGGCAGGGATC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp AAGTCTGAACAGACAGCATGGAACTACCAGCAGCCGCCAGTTTCCTCACAGACTCTACTTACACCAAGCTaGAGTCTGAACAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: KSEQTAWNYQQPPVSSQTLLTPS*SLNRQH
Trigger: ATGCTGTCTGTTCAGACTTCAGCTTGGTGTAAGTAG...AGTCTGTGAGGAAACTGGCGGCTGCTGGTAGTTCCATGCTGTCTGTTCAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR GCA 90 bp GGCAGGAGGGGGCTGCTGGTATTGCTGCTGCAGAGAATTATGGTGATGAAGAGAGAAAGTTGGCCATCGTaGCATGAGTATAACCAAAGT +
Preference number: 4 (lower is better)
Translates to: GRRGLLVLLLQRIMVMKRESWPS*HEYNQS
Trigger: ACTTTGGTTATACTCATGGCACGATGGCCAACTTTC...TCTCTTCATCACCATAATTCTCTGCAGCAGCAATACCAGCAGCCCCCTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACGTAATCAGTGGAATATaGCTTCCCAATGATATTCCA +
Preference number: 4 (lower is better)
Translates to: GSFRITSGAIHATVPANDVISGI*LPNDIP
Trigger: TGGAATATCATTGGGAAGGCATATTCCACTGATTAC...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438053.5
ENST00000439882.1
CDS-3UTR GCA 90 bp GGCAGGAGGGGGCTGCTGGTATTGCTGCTGCAGAGAATTATGGTGATGAAGAGAAAATGCATGAGTGTCTaGCGAAAAGAAGGTCGGTTT +
Preference number: 4 (lower is better)
Translates to: GRRGLLVLLLQRIMVMKRKCMSV*RKEGRF
Trigger: AAACCGACCTTCTTTTCGGCAGACACTCATGCATTT...TCTCTTCATCACCATAATTCTCTGCAGCAGCAATACCAGCAGCCCCCTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp TCCAAGAGAGGATTATGTGCTGGTGACTTGGAAAGGTCAGGGCTCCTCCCCACTGAGGCAATGTCTAAATaGATGAGTGTCTGCCGAAAA +
Preference number: 4 (lower is better)
Translates to: SKRGLCAGDLERSGLLPTEAMSK*MSVCRK
Trigger: TTTTCGGCAGACACTCATGCATTTAGACATTGCCTC...AGTGGGGAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAATCCTCTCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGAGGCAATGTCTAAATaGATGAGTGTCTGCCGAAAA +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIEAMSK*MSVCRK
Trigger: TTTTCGGCAGACACTCATGCATTTAGACATTGCCTC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGCGAATATCCAGCGCATaGCTGAGCTCTTCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLRISSA*LSSSLR
Trigger: GCGCAGAGAAGAGCTCAGGCATGCGCTGGATATTCG...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTTCCCGCATTTCTAGCTaGAGCATGATGGCACTCAAT +
Preference number: 4 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSSRISS*SMMALN
Trigger: ATTGAGTGCCATCATGCTGCAGCTAGAAATGCGGGA...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp AGGATTTTGAATCCATCAGGGCAAGTGGAAGGAACTGGAAGGTGGAGGCTGTTGTCCCGCATTTCTAGCTaGAGCATGATGGCACTCAAT +
Preference number: 4 (lower is better)
Translates to: RILNPSGQVEGTGRWRLLSRISS*SMMALN
Trigger: ATTGAGTGCCATCATGCTGCAGCTAGAAATGCGGGA...CAACAGCCTCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp GCGGTGGCGTGGTTTGCTTCGATATCGGCTCTTGCTGCTAGAAGTGGACATTTTTTCTTTTCCACTGCTTaGTCACGCTTAATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AVAWFASISALAARSGHFFFSTA*SRLMSS
Trigger: GGAGCTCATTAAGCGTGAGCAAGCAGTGGAAAAGAA...AAAATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAGCAAACCACGCCACCGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp AGAATTATGGTGATGAAGAGAAGGGTATTGGGATTGAGCTTGGTGCAGGTAAGTATGGCAGGAGGGGGCTaGTGGTATTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RIMVMKRRVLGLSLVQVSMAGGG*WYCCCR
Trigger: TCTGCAGCAGCAATACCAGCAGCCCCCTCCTGCCAT...ACTTACCTGCACCAAGCTCAATCCCAATACCCTTCTCTTCATCACCATAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAGCTCCGCAGGGCTGCTaGTGGGCCGAAATACCTCAG +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSAPQGC*WAEIPQ
Trigger: CTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGC...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAGTAGCGCTGGAGGGGTaGCGAGATGAGAGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSVALEG*RDERCR
Trigger: TCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTAC...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTGGGGTGGATCTGAAATaGCAGTATAGTCACGAGATC +
Preference number: 4 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSGVDLK*QYSHEI
Trigger: GATCTCGTGACTATACTGGCATTTCAGATCCACCCC...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp CCTCCAGGGCAGCAAGGGGCAAGATCTCATCATGCTCCTCAGAATGCTGTGCAAGATAATACAATAACATaGGGCCTGAGTACAAACACC +
Preference number: 4 (lower is better)
Translates to: PPGQQGARSHHAPQNAVQDNTIT*GLSTNT
Trigger: GGTGTTTGTACTCAGGCCCCATGTTATTGTATTATC...TTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCGATAATACAATAACATaGGGCCTGAGTACAAACACC +
Preference number: 4 (lower is better)
Translates to: SFRITSGAIHATVPANDIDNTIT*GLSTNT
Trigger: GGTGTTTGTACTCAGGCCCCATGTTATTGTATTATC...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000439882.1
CDS-3UTR CCA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGTTTACCGCATCTGTGTaGGTCACTAAAACATTAGGT +
Preference number: 4 (lower is better)
Translates to: FRITSGAIHATVPANDILFTASV*VTKTLG
Trigger: ACCTAATGTTTTAGTGACCCACACAGATGCGGTAAA...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000439882.1
CDS-3UTR CCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTGAAGGAACTGGAAGGTaGAGGCTGTTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: LASSSFSVGAPHHLANRSEGTGR*RLLLPT
Trigger: TGTTGGAAGCAACAGCCTCCACCTTCCAGTTCCTTC...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTAAGTTTCTTGTGGGGTaGCAAGTACATCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ECLPKRRSVSRFTLPRLFKFLVG*QVHLQR
Trigger: CCTCTGCAGATGTACTTGCCACCCCACAAGAAACTT...AAACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR CCA 90 bp CTGCTGGTATTGCTGCTGCAGAGAATTATGGTGATGAAGAGAAGGGTATTGGGAGAGCCACTTCTGTGGTaGGGATCCCTTCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: LLVLLLQRIMVMKRRVLGEPLLW*GSLLIS
Trigger: TGAGATCAGAAGGGATCCCCACCACAGAAGTGGCTC...TCCCAATACCCTTCTCTTCATCACCATAATTCTCTGCAGCAGCAATACCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp TCTCTGCGCCTTCGAATCAGTTCTTCATCTAACCGGTGTATACAAGTTCCTTCATGGGAGCCACTTCTGTaGTGGGGATCCCTTCTGATC +
Preference number: 4 (lower is better)
Translates to: SLRLRISSSSNRCIQVPSWEPLL*WGSLLI
Trigger: GATCAGAAGGGATCCCCACCACAGAAGTGGCTCCCA...TGAAGGAACTTGTATACACCGGTTAGATGAAGAACTGATTCGAAGGCGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAGAGAACAAAGGGGTCTaGCAGGAAGGAGATTGCAAA +
Preference number: 4 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATENKGV*QEGDCK
Trigger: TTTGCAATCTCCTTCCTGCCAGACCCCTTTGTTCTC...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGTCCATCAAATATTTTTaGACTGCTGTTGAGCGTAAC +
Preference number: 4 (lower is better)
Translates to: VSLPRQNAGREWDESGGGSIKYF*TAVERN
Trigger: GTTACGCTCAACAGCAGTCCAAAAATATTTGATGGA...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATGCTGTGAAGTGGCTCTaGAGAGCAGACCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDAVKWL*RADLGC
Trigger: GCATCCCAGGTCTGCTCTCCAGAGCCACTTCACAGC...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTTTGGCCTGCAGTCACTaGAGGACCCTGTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFLACSH*RTLSTW
Trigger: CCAGGTGGACAGGGTCCTCCAGTGACTGCAGGCCAA...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGATAGCTTGCACATGCTaGCTGGGGTTCCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLIACTC*LGFPWP
Trigger: AGGCCAAGGGAACCCCAGCCAGCATGTGCAAGCTAT...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 72 bp GGCACTCCTTTCCTTTTCATGAGTTTCTCCATGGCATaGGGATGGATGATAGGACGAACAGGGTGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: GTPFLFMSFSMA*GWMIGRTGCRL
Trigger: CAAACGACACCCTGTTCGTCCTATCATCCATCCCAATGCCATGGAGAAACTCATGAAAAGGAAAGGAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp TGGGGCCTGAGTACAAACACCCTTGAATGCGATGATGTTAGGGTGCTTCAACTTGACCGTGCCAGCAAATaGCATCTTGGTACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: WGLSTNTLECDDVRVLQLDRASK*HLGTFV
Trigger: GACAAAAGTACCAAGATGTCATTTGCTGGCACGGTC...AAGTTGAAGCACCCTAACATCATCGCATTCAAGGGTGTTTGTACTCAGGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR TCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTCTGAGCATGGTTGCTaGGTGGGCTCCGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHSEHGC*VGSAGL
Trigger: CAGCCCTGCGGAGCCCACTCAGCAACCATGCTCAGA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCCGGGCAGCTGTCTCTaGGCATGGTTGCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSPGSCL*AWLLSG
Trigger: CCCACTCAGCAACCATGCTCAGAGACAGCTGCCCGG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCCGGGCAGCTGTCTCTaGGCATGGTTGCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISPGSCL*AWLLSG
Trigger: CCCACTCAGCAACCATGCTCAGAGACAGCTGCCCGG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp ATCTCAACAAGTCTGGCCGTTTGGTCTGCATCCCAGATTTGTGAGGCACTCCTTCAGACCTACAGCCGCTaGATTCATTTTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: ISTSLAVWSASQICEALLQTYSR*IHFLPF
Trigger: AAACGGAAGAAAATGAATTCAGCGGCTGTAGGTCTG...AAGGAGTGCCTCACAAATCTGGGATGCAGACCAAACGGCCAGACTTGTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTCCTGGACAAGCTGGTTaGAGTGAATATGGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LASSSFSVGAPHHLANRSPGQAG*SEYGLF
Trigger: GAACAGACCATATTCACTTCAACCAGCTTGTCCAGG...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATGGAAGCACATGCCCTTaGAGACATTGGGTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYGSTCP*RHWVQV
Trigger: TACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCC...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCTATACAATGAATGACTaGGATTCAGCCACTACGTAC +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIYTMND*DSATTY
Trigger: GTACGTAGTGGCTGAATCTCAGTCATTCATTGTATA...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TTGGAAGCTACCAACCAACACAGCGAGGTGGGAGGGTTTGTTACTCTAACTCTTCACCAAGCTGAAGTCTaGACAGACAGCATGGAACTA +
Preference number: 4 (lower is better)
Translates to: LEATNQHSEVGGFVTLTLHQAEV*TDSMEL
Trigger: TAGTTCCATGCTGTCTGTTCAGACTTCAGCTTGGTG...AAGAGTTAGAGTAACAAACCCTCCCACCTCGCTGTGTTGGTTGGTAGCTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR TCA 90 bp CTTGCAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTGATCTTCCTGCCATCCAAAACACCAAGCTaGAGTCTGAACAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: LAIPVDQSTSNRGVIFLPSKTPS*SLNRQH
Trigger: ATGCTGTCTGTTCAGACTTCAGCTTGGTGTTTTGGA...TGGCAGGAAGATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR TCA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGTTCCCAAGTATCTGCTaGACTGAATCTTTATGTCTT +
Preference number: 4 (lower is better)
Translates to: FRITSGAIHATVPANDILFPSIC*TESLCL
Trigger: AAGACATAAAGATTCAGTTCAGCAGATACTTGGGAA...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR TCA 90 bp TCCGATGGCTGGGCTTTGGTTTCCGAGGGGATTTCTTTCCCATATGTTCTTTTGGGATCAGGTTCACACTaGTACACATTTACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SDGWALVSEGISFPYVLLGSGSH*YTFTVA
Trigger: GGCCACTGTAAATGTGTATCAGTGTGAACCTGATCC...CAAAAGAACATATGGGAAAGAAATCCCCTCGGAAACCAAAGCCCAGCCATCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR GCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACGTGGTGACGGGGCTGTaGACGCTCTCGATTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYVVTGL*TLSISS
Trigger: AGAGCTAATCGAGAGCGTGCACAGCCCCGTCACCAC...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGGACGTATTTGCCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAACTCCGTCCACCGTGTTaGTGTTCCCCTGAGACACCG +
Preference number: 4 (lower is better)
Translates to: GTYLPKTRFDTICKPHYQLRPPC*CSPETP
Trigger: CGGTGTCTCAGGGGAACAGCAACACGGTGGACGGAG...TTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTCTTCCGCCCGGAACTTaGCCAAGAAGACCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFLPPGT*PRRPLL
Trigger: AAGGAGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAG...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCATACTTCTTTTCCACTaGTTGCTCACGCTTAATGAG +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIILLFH*LLTLNE
Trigger: CTCATTAAGCGTGAGCAAGCAGTGGAAAAGAAGTAT...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACACTATGGCTGCCTCTaGTATTCCCTCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSHYGCL*YSLGGG
Trigger: GCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TCTCTGCGCCTTCGAATCAGTTCTTCATCTAACCGGTGTATACAAGTTCCTTCACAAAGTCACTATGGCTaGCTCTGCTATTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: SLRLRISSSSNRCIQVPSQSHYG*LCYSLG
Trigger: GCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTG...TGAAGGAACTTGTATACACCGGTTAGATGAAGAACTGATTCGAAGGCGCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGCTCCGCAGGGCTGCTaGTGGGCCGAAATACCTCAG +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSAPQGC*WAEIPQ
Trigger: CTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTGGGCTCCGCAGGGCTaGTGCTGGGCCGAAATACCT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSWAPQG*CWAEIP
Trigger: AGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGCCCA...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTGTAGCGCTGGAGGGGTaGCGAGATGAGAGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISVALEG*RDERCR
Trigger: TCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTAC...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp ATCTCAACAAGTCTGGCCGTTTGGTCTGCATCCCAGATTTGTGAGGCACTCCTTTCATCTCCACTCTTCTaGAGAGGCCTTGTTTTTCGA +
Preference number: 4 (lower is better)
Translates to: ISTSLAVWSASQICEALLSSPLF*RGLVFR
Trigger: TCGAAAAACAAGGCCTCTGCAGAAGAGTGGAGATGA...AAGGAGTGCCTCACAAATCTGGGATGCAGACCAAACGGCCAGACTTGTTGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp TTTGATAGTCATTCTTGTTCCCATTGCCGTTCAATACAGAGAGGGAGCCGGCATTGCTGGGAGAGGAGTTaGCTTTTGCAAGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: FDSHSCSHCRSIQRGSRHCWERS*LLQAAC
Trigger: ACAAGCAGCTTGCAAAAGGCAACTCCTCTCCCAGCA...ATGCCGGCTCCCTCTCTGTATTGAACGGCAATGGGAACAAGAATGACTATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCAGCATTGAACAAAAATaGTATTGTGCTGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEISIEQK*YCAGRG
Trigger: TCCTCTCCCAGCACAATAGCATTTTTGTTCAATGCT...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTGCAGACCTGGGATGCTaGCGGGAGCTTCCTTACAGT +
Preference number: 4 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFADLGC*RELPYS
Trigger: ACTGTAAGGAAGCTCCCGGCAGCATCCCAGGTCTGC...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TTCATTCCACTTGCAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTGATCTCTCAAACTGGTCCCTaGAATCCTCACTTACGCTCG +
Preference number: 4 (lower is better)
Translates to: FIPLAIPVDQSTSNRGVISQTGP*NPHLRS
Trigger: CGAGCGTAAGTGAGGATTCCAGGGACCAGTTTGAGA...GATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTGGAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CCA 90 bp TCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCCTCGTTTTACCGCATCTGTGTaGGTCACTAAAACATTAGGT +
Preference number: 4 (lower is better)
Translates to: SSRQATWLQRGVVPSSPRFTASV*VTKTLG
Trigger: ACCTAATGTTTTAGTGACCCACACAGATGCGGTAAA...ACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp AGGATTTTGAATCCATCAGGGCAAGTGGAAGGAACTGGAAGGTGGAGGCTGTTGGAAGTAAGTTTCTTGTaGGGTGGCAAGTACATCTGC +
Preference number: 4 (lower is better)
Translates to: RILNPSGQVEGTGRWRLLEVSFL*GGKYIC
Trigger: GCAGATGTACTTGCCACCCCACAAGAAACTTACTTC...CAACAGCCTCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACCCTCGGCGGTGGCGTaGTTTGCTTCGATATCGGCT +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSPSAVA*FASISA
Trigger: AGCCGATATCGAAGCAAACCACGCCACCGCCGAGGG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TCTCTGCGCCTTCGAATCAGTTCTTCATCTAACCGGTGTATACAAGTTCCTTCACTATTCCCTCGGCGGTaGCGTGGTTTGCTTCGATAT +
Preference number: 4 (lower is better)
Translates to: SLRLRISSSSNRCIQVPSLFPRR*RGLLRY
Trigger: ATATCGAAGCAAACCACGCCACCGCCGAGGGAATAG...TGAAGGAACTTGTATACACCGGTTAGATGAAGAACTGATTCGAAGGCGCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAAAGGTTGAATATGACTaGCAGCTGCTGATACAGCGA +
Preference number: 4 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATKVEYD*QLLIQR
Trigger: TCGCTGTATCAGCAGCTGCCAGTCATATTCAACCTT...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCCTCGTGGATCCATCAGTGATTaGTGTTCCTTCAATTGGAAT +
Preference number: 4 (lower is better)
Translates to: SSRQATWLQRGVVPSSPRGSISD*CSFNWN
Trigger: ATTCCAATTGAAGGAACACCAATCACTGATGGATCC...ACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGGGAGCTTCCTTACAGTaGCCTTGCCATCTGCTTAGG +
Preference number: 4 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLGASLQ*PCHLLR
Trigger: CCTAAGCAGATGGCAAGGCCACTGTAAGGAAGCTCC...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACTTGCACATGCTGGCTaGGGTTCCCTTGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSLAHAG*GSLGLQ
Trigger: CTGCAGGCCAAGGGAACCCCAGCCAGCATGTGCAAG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGAACAACACTGGGAGCTaGGGACTGACAGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLNNTGS*GLTVQE
Trigger: CTCCTGTACTGTCAGTCCCCAGCTCCCAGTGTTGTT...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TTTGATAGTCATTCTTGTTCCCATTGCCGTTCAATACAGAGAGGGAGCCGGCATTCGTGTTCCCTTAGCTaGAGAACGCTGTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: FDSHSCSHCRSIQRGSRHSCSLS*RTLFSN
Trigger: GTTTGAGAACAGCGTTCTTCAGCTAAGGGAACACGA...ATGCCGGCTCCCTCTCTGTATTGAACGGCAATGGGAACAAGAATGACTATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp AAGGGTATTGGGATTGAGCTTGGTGCAGGTAAGTGGGATGGGGTGAATTTTCCTCACTGCCTGACCTGCTaGACTGAATCTTTATGTCTT +
Preference number: 4 (lower is better)
Translates to: KGIGIELGAGKWDGVNFPHCLTC*TESLCL
Trigger: AAGACATAAAGATTCAGTTCAGCAGGTCAGGCAGTG...AGGAAAATTCACCCCATCCCACTTACCTGCACCAAGCTCAATCCCAATACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR TCA 90 bp GGGACGTATTTGCCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAAGGTGGGGATCCCTTCTaGTCTCAACAAGTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GTYLPKTRFDTICKPHYQGGDPF*SQQVWP
Trigger: CGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACC...TTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATAGAGGTGCCGAGGGATaGCTCAGACCTACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHRGAEG*LRPTAA
Trigger: AGCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCT...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTAGAGGTGCCGAGGGATaGCTCAGACCTACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISRGAEG*LRPTAA
Trigger: AGCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAATGACTGGCAGCTGCTaGTACAGCGATGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSMTGSC*YSDGAS
Trigger: AGAGGCCCCATCGCTGTATCAGCAGCTGCCAGTCAT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAGCTTTTCAGAGCCCATaGCCCTGGAGACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSAFQSP*PWRQAG
Trigger: TCCTGCCTGTCTCCAGGGTCATGGGCTCTGAAAAGC...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATCTTGAAACGAATCCATaGGCCCTGTGCGGAAACCCT +
Preference number: 4 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDLETNP*ALCGNP
Trigger: AGGGTTTCCGCACAGGGCTCATGGATTCGTTTCAAG...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTGAAGAGCCACTGGGGTaGTATGGGCAAGATGGGACA +
Preference number: 4 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFEEPLG*YGQDGT
Trigger: TGTCCCATCTTGCCCATATCACCCCAGTGGCTCTTC...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTAACTTACCTGAGACTTaGAGTAAGTTTCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCNLPET*SKFLVG
Trigger: CCCCACAAGAAACTTACTTCAAGTCTCAGGTAAGTT...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR GCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCTTCAACTTCCTCAAATaGTTGATATCCGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIFNFLK*LISVSF
Trigger: GAATGAGACGGATATCAAGCATTTGAGGAAGTTGAA...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000443863.5
CDS-3UTR GCA 90 bp TGGGGCCTGAGTACAAACACCCTTGAATGCGATGATGTTAGGGTGCTTCAACTTGCGATGATGTTAGGGTaGTTCAACTTCCTCAAATGC +
Preference number: 4 (lower is better)
Translates to: WGLSTNTLECDDVRVLQLAMMLG*FNFLKC
Trigger: GCATTTGAGGAAGTTGAAGCACCCTAACATCATCGC...AAGTTGAAGCACCCTAACATCATCGCATTCAAGGGTGTTTGTACTCAGGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR GCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTGAGGCAATGTCTAAATaGATGAGTGTCTGCCGAAAA +
Preference number: 4 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSEAMSK*MSVCRK
Trigger: TTTTCGGCAGACACTCATGCATTTAGACATTGCCTC...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATGGCGGTGGCGTGGTTTaGTTCGATATCGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYGGGVV*FDIGSC
Trigger: GCAAGAGCCGATATCGAAGCAAACCACGCCACCGCC...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCACTATGGCTGCCTCTaGTATTCCCTCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISHYGCL*YSLGGG
Trigger: GCCACCGCCGAGGGAATAGCAGAGGCAGCCATAGTG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATATGGCAGGAGGGGGCTaGTGGTATTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYMAGGG*WYCCCR
Trigger: TCTGCAGCAGCAATACCAGCAGCCCCCTCCTGCCAT...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp AGAATTATGGTGATGAAGAGAAGGGTATTGGGATTGAGCTTGGTGCAGGTAAGTCATACTGTTCTGGCCTaGACTGAAGGCAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RIMVMKRRVLGLSLVQVSHTVLA*TEGRGH
Trigger: ATGACCCCTGCCTTCAGTGCAGGCCAGAACAGTATG...ACTTACCTGCACCAAGCTCAATCCCAATACCCTTCTCTTCATCACCATAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGCCGAGATGAGAGGTaGCGAGGGATGACTCAGACC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSCRDER*RGMTQT
Trigger: GGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCA...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTTCATCTCCACTCTTCTaGAGAGGCCTTGTTTTTCGA +
Preference number: 4 (lower is better)
Translates to: LASSSFSVGAPHHLANRSSSPLF*RGLVFR
Trigger: TCGAAAAACAAGGCCTCTGCAGAAGAGTGGAGATGA...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATAGTGAACTGAGATTGTaGCATTGCACTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYSELRL*HCTLAW
Trigger: CCAGGCTAGAGTGCAATGGCACAATCTCAGTTCACT...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTAATATGATTCTAATGTaGCAGTCTGTGAGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSNMILM*QSVRVG
Trigger: TCCCACCCTCACAGACTGGCACATTAGAATCATATT...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATACGCTGTTCTCAAACTaGTCCCTGGAATCCTCACTT +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYTLFSN*SLESSL
Trigger: AAGTGAGGATTCCAGGGACCAGTTTGAGAACAGCGT...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TGGGGCCTGAGTACAAACACCCTTGAATGCGATGATGTTAGGGTGCTTCAACTTCACTTGCAATTCCTGTaGACCAGTCTACTAGCAATC +
Preference number: 4 (lower is better)
Translates to: WGLSTNTLECDDVRVLQLHLQFL*TSLLAI
Trigger: GATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTG...AAGTTGAAGCACCCTAACATCATCGCATTCAAGGGTGTTTGTACTCAGGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATGCAAGTGGAAGGAACTaGAAGGTGGAGGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDASGRN*KVEAVA
Trigger: AGCAACAGCCTCCACCTTCCAGTTCCTTCCACTTGC...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TGGGGCCTGAGTACAAACACCCTTGAATGCGATGATGTTAGGGTGCTTCAACTTGAAGTAAGTTTCTTGTaGGGTGGCAAGTACATCTGC +
Preference number: 4 (lower is better)
Translates to: WGLSTNTLECDDVRVLQLEVSFL*GGKYIC
Trigger: GCAGATGTACTTGCCACCCCACAAGAAACTTACTTC...AAGTTGAAGCACCCTAACATCATCGCATTCAAGGGTGTTTGTACTCAGGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCCCTCGGCGGTGGCGTaGTTTGCTTCGATATCGGCT +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISPSAVA*FASISA
Trigger: AGCCGATATCGAAGCAAACCACGCCACCGCCGAGGG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCCGCAGGGCTGCTGCTaGGCCGAAATACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSPQGCC*AEIPQV
Trigger: AACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCCCCAGGGACCAGCTTaGCCCTTGTCAGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHPQGPA*PLSGSE
Trigger: TTCTGAGCCTGACAAGGGCCAAGCTGGTCCCTGGGG...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCCCCAGGGACCAGCTTaGCCCTTGTCAGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISPQGPA*PLSGSE
Trigger: TTCTGAGCCTGACAAGGGCCAAGCTGGTCCCTGGGG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCAGGGCTCCTCCCCACTaGCTCAGCAGAGGGTATGTC +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSRAPPH*LSRGYV
Trigger: GACATACCCTCTGCTGAGCCAGTGGGGAGGAGCCCT...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTAGGGCTCCTCCCCACTaGCTCAGCAGAGGGTATGTC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISRAPPH*LSRGYV
Trigger: GACATACCCTCTGCTGAGCCAGTGGGGAGGAGCCCT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAGGAATCTCTGGCGTCTaGGACAGCAGGTCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSGISGV*DSRSSS
Trigger: GCTAGACGACCTGCTGTCCCAGACGCCAGAGATTCC...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp ATCTCAACAAGTCTGGCCGTTTGGTCTGCATCCCAGATTTGTGAGGCACTCCTTATTCTTCAAACTGCATaGGGTTCTCATAGCCACGTT +
Preference number: 4 (lower is better)
Translates to: ISTSLAVWSASQICEALLILQTA*GSHSHV
Trigger: AACGTGGCTATGAGAACCCCATGCAGTTTGAAGAAT...AAGGAGTGCCTCACAAATCTGGGATGCAGACCAAACGGCCAGACTTGTTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CCA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCTTGGGTGCAAGTATCTaGTCACCAGACTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLLGASI*SPDFSR
Trigger: CCTAGAAAAGTCTGGTGACCAGATACTTGCACCCAA...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTAAAATGCTATTGTGCTaGGAGAGGAGTTGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSKMLLC*ERSCLL
Trigger: CAAAAGGCAACTCCTCTCCCAGCACAATAGCATTTT...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAATGAAAATGAAGCCATaGGTAAGAGGGGACTACTGT +
Preference number: 4 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATMKMKP*VRGDYC
Trigger: ACAGTAGTCCCCTCTTACCCATGGCTTCATTTTCAT...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 72 bp GATGCAGTGTCAAAGAGTCCAGTGAATCTAGAGAGGTaGTTTGACGGTAATCTGTCTTGGAGACAGGGACAG +
Preference number: 4 (lower is better)
Translates to: DAVSKSPVNLER*FDGNLSWRQGQ
Trigger: CTGTCCCTGTCTCCAAGACAGATTACCGTCAAACAACCTCTCTAGATTCACTGGACTCTTTGACACTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 72 bp TGGCAGGAAGGAGATTGCAAACTATGTTGTCAATTCTaGAAACGAATCCATGAGCCCTGTGCGGAAACCCTC +
Preference number: 4 (lower is better)
Translates to: WQEGDCKLCCQF*KRIHEPCAETL
Trigger: GAGGGTTTCCGCACAGGGCTCATGGATTCGTTTCAAGAATTGACAACATAGTTTGCAATCTCCTTCCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACAGCCACTGCAGCTCTaGGATCTCCTCAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSQPLQL*DLLKWH
Trigger: GTGCCATTTGAGGAGATCTCAGAGCTGCAGTGGCTG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000443863.5
CDS-3UTR TCA 90 bp ATTTTGAATCCATCAGGGCAAGTGGAAGGAACTGGAAGGTGGAGGCTGTTGCTTCAATGTCTAAATGCATaGGTGTCTGCCGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: ILNPSGQVEGTGRWRLLLQCLNA*VSAEKK
Trigger: CTTCTTTTCGGCAGACACTCATGCATTTAGACATTG...AAGCAACAGCCTCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR TCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAGTAAGTGGGATGGGGTaGATTTTCCTGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSVSGMG*IFLGWL
Trigger: CAGCCAGCCCAGGAAAATTCACCCCATCCCACTTAC...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTGAGTCTGGGATGGTaGCTCTGGGACATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSLSLGW*LWDMAG
Trigger: TCCTGCCATGTCCCAGAGTCACCATCCCAGACTCAA...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTTGCCCAGAGACATCTaGGTCTTCACACGGCGCACG +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSLPRDI*VFTRRT
Trigger: CGTGCGCCGTGTGAAGACTCAGATGTCTCTGGGCAA...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTTTGCCCAGAGACATCTaGGTCTTCACACGGCGCACG +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISLPRDI*VFTRRT
Trigger: CGTGCGCCGTGTGAAGACTCAGATGTCTCTGGGCAA...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAAGATTTACAGTACAGTaGGATCTGAAGTCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATRFTVQ*DLKSRG
Trigger: TCCTCTTGACTTCAGATCTCACTGTACTGTAAATCT...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACACATTGTTTTGGTACATaGGTCTCACAGAGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATHCFGT*VSQSLR
Trigger: TCTTAGACTCTGTGAGACTCATGTACCAAAACAATG...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAGCACTAAATTCATACTaGCCGTACAAGTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATALNSY*PYKSKS
Trigger: AGACTTTGACTTGTACGGTCAGTATGAATTTAGTGC...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGGACGTATTTGCCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAACCACTACCCAGCCACTaGAGCTCTGAGATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GTYLPKTRFDTICKPHYQPLPSH*SSEISS
Trigger: TGAGGAGATCTCAGAGCTGCAGTGGCTGGGTAGTGG...TTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCTTCCGCCCGGAACTTaGCCAAGAAGACCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHLPPGT*PRRPLL
Trigger: AAGGAGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAG...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000443863.5
CDS-3UTR GCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTACAAACACCCTTGAATaGGATGATGTTAGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LASSSFSVGAPHHLANRSTNTLE*DDVRVL
Trigger: AAGCACCCTAACATCATCGCATTCAAGGGTGTTTGT...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TTTGATAGTCATTCTTGTTCCCATTGCCGTTCAATACAGAGAGGGAGCCGGCATTTCTTTTCCACTGCTTaGTCACGCTTAATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FDSHSCSHCRSIQRGSRHFFSTA*SRLMSS
Trigger: GGAGCTCATTAAGCGTGAGCAAGCAGTGGAAAAGAA...ATGCCGGCTCCCTCTCTGTATTGAACGGCAATGGGAACAAGAATGACTATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTATACTTCTTTTCCACTaGTTGCTCACGCTTAATGAG +
Preference number: 4 (lower is better)
Translates to: ECLPKRRSVSRFTLPRLFILLFH*LLTLNE
Trigger: CTCATTAAGCGTGAGCAAGCAGTGGAAAAGAAGTAT...AAACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCCGGACAAAGGGGATaGAGTGGGAGCCACTTCTGT +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSSGQRG*SGSHFC
Trigger: ACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGA...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGGCGGTGGCGTGGTTTaGTTCGATATCGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHGGGVV*FDIGSC
Trigger: GCAAGAGCCGATATCGAAGCAAACCACGCCACCGCC...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGGCGGTGGCGTGGTTTaGTTCGATATCGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSGGGVV*FDIGSC
Trigger: GCAAGAGCCGATATCGAAGCAAACCACGCCACCGCC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTATGGCAGGAGGGGGCTaGTGGTATTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISMAGGG*WYCCCR
Trigger: TCTGCAGCAGCAATACCAGCAGCCCCCTCCTGCCAT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCATGGCAGGAGGGGGCTaGTGGTATTGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSMAGGG*WYCCCR
Trigger: TCTGCAGCAGCAATACCAGCAGCCCCCTCCTGCCAT...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACCATACTGTTCTGGCCTaGACTGAAGGCAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYHTVLA*TEGRGH
Trigger: ATGACCCCTGCCTTCAGTGCAGGCCAGAACAGTATG...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTGCCGAGATGAGAGGTaGCGAGGGATGACTCAGACC +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHCRDER*RGMTQT
Trigger: GGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCACAAAAATGCTATTGTaGTGGGAGAGGAGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLTKMLL*WERSCL
Trigger: AAGGCAACTCCTCTCCCAGCACAATAGCATTTTTGT...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAAGCTTGGGAGAAGGGTaGTTCCCCATAGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSSLGEG*FPIAVS
Trigger: GCTCACAGCTATGGGGAACCACCCTTCTCCCAAGCT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp CTTGCAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTGATCTTCCTGCCAGATAATACAATAACATaGGGCCTGAGTACAAACACC +
Preference number: 4 (lower is better)
Translates to: LAIPVDQSTSNRGVIFLPDNTIT*GLSTNT
Trigger: GGTGTTTGTACTCAGGCCCCATGTTATTGTATTATC...TGGCAGGAAGATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CCA 90 bp GAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTTTTACCGCATCTGTGTaGGTCACTAAAACATTAGGT +
Preference number: 4 (lower is better)
Translates to: ECLPKRRSVSRFTLPRLFFTASV*VTKTLG
Trigger: ACCTAATGTTTTAGTGACCCACACAGATGCGGTAAA...AAACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAATTCCGTATCACCTCTaGCGCCATCCATGCGACCGT +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSIPYHL*RHPCDR
Trigger: ACGGTCGCATGGATGGCGCCAGAGGTGATACGGAAT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp AGTACAAACACCCTTGAATGCGATGATGTTAGGGTGCTTCAACTTCCTCAAATGATCCATCAGGGCAAGTaGAAGGAACTGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: STNTLECDDVRVLQLPQMIHQGK*KELEGG
Trigger: TCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGAT...CATTTGAGGAAGTTGAAGCACCCTAACATCATCGCATTCAAGGGTGTTTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGGGAGCCACTTCTGTaGTGGGGATCCCTTCTGATC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSWEPLL*WGSLLI
Trigger: GATCAGAAGGGATCCCCACCACAGAAGTGGCTCCCA...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAACAAAGGGGATGCAGTaGGAGCCACTTCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSTKGMQ*EPLLWW
Trigger: CCACCACAGAAGTGGCTCCCACTGCATCCCCTTTGT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGTTTTCCTGGGCTGGCTaGTTTTTCAAGATTGCGGCA +
Preference number: 4 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLFSWAG*FFKIAA
Trigger: TGCCGCAATCTTGAAAAACCAGCCAGCCCAGGAAAA...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGCTTGGTGCAGGTAAGTaGGATGGGGTGAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLLGAGK*DGVNFP
Trigger: AGGAAAATTCACCCCATCCCACTTACCTGCACCAAG...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCAGCAGGAGGGGGCTGCTaGTATTGCTGCTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSAGGGC*YCCCRE
Trigger: TTCTCTGCAGCAGCAATACCAGCAGCCCCCTCCTGC...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGGACCCATACTGTTCTaGCCTGCACTGAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSGPILF*PALKAG
Trigger: CCCTGCCTTCAGTGCAGGCCAGAACAGTATGGGTCC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATCACCATGAAGTACCTTaGAATGCTTTTCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYHHEVP*NAFQSP
Trigger: TGGGCTCTGAAAAGCATTCCAAGGTACTTCATGGTG...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCAAACATTTTGCTGCCTaGAAAGGCACTAAATTCATA +
Preference number: 4 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIKHFAA*KGTKFI
Trigger: TATGAATTTAGTGCCTTTCCAGGCAGCAAAATGTTT...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp ATTTTGAATCCATCAGGGCAAGTGGAAGGAACTGGAAGGTGGAGGCTGTTGCTTTTTACCGCATCTGTGTaGGTCACTAAAACACTTGCT +
Preference number: 4 (lower is better)
Translates to: ILNPSGQVEGTGRWRLLLFTASV*VTKTLA
Trigger: AGCAAGTGTTTTAGTGACCCACACAGATGCGGTAAA...AAGCAACAGCCTCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438053.5
3UTR CAA 72 bp CATTTCGTGCACACGGGACCTGTTTTAGCAGCACACTaGCTGATACACCTCACGGCTTTCTTTTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: HFVHTGPVLAAH*LIHLTAFFSIK
Trigger: TTTAATGGAAAAGAAAGCCGTGAGGTGTATCAGCAAGTGTGCTGCTAAAACAGGTCCCGTGTGCACGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR TCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTACTTCCTCAAATGCTTaGTATCCGTCTCATTCTGTT +
Preference number: 4 (lower is better)
Translates to: LASSSFSVGAPHHLANRSTSSNA*YPSHSV
Trigger: AACAGAATGAGACGGATATCAAGCATTTGAGGAAGT...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACTAGCAATCGAGGTGTaGTCTTCCTGCCAGCTCGTA +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSLAIEV*SSCQLV
Trigger: TACGAGCTGGCAGGAAGATCACACCTCGATTGCTAG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTGTAAGTGGGATGGGGTaGATTTTCCTGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISVSGMG*IFLGWL
Trigger: CAGCCAGCCCAGGAAAATTCACCCCATCCCACTTAC...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACCTGTCCGTGCATATTaGGTCTGGGATGGTGACTCT +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSPVRAY*VWDGDS
Trigger: AGAGTCACCATCCCAGACTCAATATGCACGGACAGG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACCGTTGGTCCTCTAAGTaGCCAGGCCTCCTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYRWSSK*PGLLLK
Trigger: TTTAAGAAGGAGGCCTGGTCACTTAGAGGACCAACG...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TTTGATAGTCATTCTTGTTCCCATTGCCGTTCAATACAGAGAGGGAGCCGGCATCAGTACAGTGAGATCTaGAGTCAAGAGGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: FDSHSCSHCRSIQRGSRHQYSEI*SQEDGK
Trigger: TTTTCCATCCTCTTGACTTCAGATCTCACTGTACTG...ATGCCGGCTCCCTCTCTGTATTGAACGGCAATGGGAACAAGAATGACTATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATCGACTATACAATGAATaGCTGAGATTCAGCCACTAC +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYRLYNE*LRFSHY
Trigger: GTAGTGGCTGAATCTCAGTCATTCATTGTATAGTCG...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTTTCATCCCAAGATGGTaGAACTTTCCATCAATGAAG +
Preference number: 4 (lower is better)
Translates to: LASSSFSVGAPHHLANRSFIPRW*NFPSMK
Trigger: CTTCATTGATGGAAAGTTTCACCATCTTGGGATGAA...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCATGTACTCCAACCTGGTaGCAGAGTGAGATCCTGCGC +
Preference number: 4 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSCTPTW*QSEILR
Trigger: GCGCAGGATCTCACTCTGTCACCAGGTTGGAGTACA...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TTGGAAGCTACCAACCAACACAGCGAGGTGGGAGGGTTTGTTACTCTAACTCTTACTACTGCTGAGTGCTaGAACTTTCTTTTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: LEATNQHSEVGGFVTLTLTTAEC*NFLFSS
Trigger: ACTACTGAAAAGAAAGTTTCAGCACTCAGCAGTAGT...AAGAGTTAGAGTAACAAACCCTCCCACCTCGCTGTGTTGGTTGGTAGCTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR GCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATGAAAGTTGGCCATCGTaGCATGAGTATAACCAAAGT +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYESWPS*HEYNQS
Trigger: ACTTTGGTTATACTCATGGCACGATGGCCAACTTTC...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TTCATTCCACTTGCAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTGATCACAAACACCCTTGAATaGGATGATGTTAGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: FIPLAIPVDQSTSNRGVITNTLE*DDVRVL
Trigger: AAGCACCCTAACATCATCGCATTCAAGGGTGTTTGT...GATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTGGAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR GCA 90 bp TTCATTCCACTTGCAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTGATCGAGGCAATGTCTAAATaGATGAGTGTCTGCCGAAAA +
Preference number: 4 (lower is better)
Translates to: FIPLAIPVDQSTSNRGVIEAMSK*MSVCRK
Trigger: TTTTCGGCAGACACTCATGCATTTAGACATTGCCTC...GATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTGGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCGAATATCCAGCGCATaGCTGAGCTCTTCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSRISSA*LSSSLR
Trigger: GCGCAGAGAAGAGCTCAGGCATGCGCTGGATATTCG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCATACTTCTTTTCCACTaGTTGCTCACGCTTAATGAG +
Preference number: 4 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLILLFH*LLTLNE
Trigger: CTCATTAAGCGTGAGCAAGCAGTGGAAAAGAAGTAT...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCCGGACAAAGGGGATaGAGTGGGAGCCACTTCTGT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSSGQRG*SGSHFC
Trigger: ACAGAAGTGGCTCCCACTGCATCCCCTTTGTCCGGA...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACAAAGTCACTATGGCTaGCTCTGCTATTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSQSHYG*LCYSLG
Trigger: GCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTGCTATGTCCTGTCCGTaGATATTGAGTCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFAMSCP*ILSLGW
Trigger: CCATCCCAGACTCAATATGCACGGACAGGACATAGC...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TTTGATAGTCATTCTTGTTCCCATTGCCGTTCAATACAGAGAGGGAGCCGGCATAGAGGAGTTGCCTTTTaGAAGCTGCTTGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: FDSHSCSHCRSIQRGSRHRGVAF*KLLVFA
Trigger: AGCAAAAACAAGCAGCTTGCAAAAGGCAACTCCTCT...ATGCCGGCTCCCTCTCTGTATTGAACGGCAATGGGAACAAGAATGACTATCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATAAGACCCCCAGTGGATaGCTAAAAACTCTGATAGTA +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYKTPSG*LKTLIV
Trigger: TACTATCAGAGTTTTTAGGCATCCACTGGGGGTCTT...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCATGCTCTGTGAAGTCCTaGCATCGTACCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSCSVKS*HRTLAT
Trigger: TGTGGCCAGGGTACGATGGCAGGACTTCACAGAGCA...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGGACGTATTTGCCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAATCCTTACAGTGGCCTTaGCATCTGCTTAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GTYLPKTRFDTICKPHYQSLQWP*HLLRAL
Trigger: CAGAGCCCTAAGCAGATGGCAAGGCCACTGTAAGGA...TTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TATGGAGGTGCAAATAATTCATTCCACTTGCAATTCCTGTGGACCAGTCTACTAGGTGCTCCTGAAAGTTaGCCATCGTGCCATGAGTAT +
Preference number: 4 (lower is better)
Translates to: YGGANNSFHLQFLWTSLLGAPES*PSCHEY
Trigger: ATACTCATGGCACGATGGCCAACTTTCAGGAGCACC...TAGTAGACTGGTCCACAGGAATTGCAAGTGGAATGAATTATTTGCACCTCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTGGGAGCCACTTCTGTaGTGGGGATCCCTTCTGATC +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHWEPLL*WGSLLI
Trigger: GATCAGAAGGGATCCCCACCACAGAAGTGGCTCCCA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCTGCTGATACAGCGATaGGGCCTCTGTCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISLLIQR*GLCLRG
Trigger: TCCACGAAGACAGAGGCCCCATCGCTGTATCAGCAG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTGTCAATGGGAATCTCTaGCGTCTGGGACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISVNGNL*RLGQQV
Trigger: GACCTGCTGTCCCAGACGCCAGAGATTCCCATTGAC...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGTCAATGGGAATCTCTaGCGTCTGGGACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHVNGNL*RLGQQV
Trigger: GACCTGCTGTCCCAGACGCCAGAGATTCCCATTGAC...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCACTATTTGACATCCTaGGGGTCATCGGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHHYLTS*GSSAHP
Trigger: TGGGTGGGCCGATGACCCCCAGGATGTCAAATAGTG...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAAGCGAAGGACCAGGCTaGGCTAGAGAAGGTATTTCC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSSEGPG*AREGIS
Trigger: GGAAATACCTTCTCTAGCCCAGCCTGGTCCTTCGCT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGGACGTATTTGCCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAATCTGGAGGCTGGGCATaGCAGCTCACGTTTGTAATC +
Preference number: 4 (lower is better)
Translates to: GTYLPKTRFDTICKPHYQSGGWA*QLTFVI
Trigger: GATTACAAACGTGAGCTGCCATGCCCAGCCTCCAGA...TTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATTGTCCAAAAGGGCAGTaGGTAGAGGCAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYCPKGQ*VEASGL
Trigger: AAGGCCACTTGCCTCTACCCACTGCCCTTTTGGACA...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATGTGATATGGGCAAGATaGGACATCTTCCTAATAGCT +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYVIWAR*DIFLIA
Trigger: AGCTATTAGGAAGATGTCCCATCTTGCCCATATCAC...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 72 bp CAGCGAGGTGGGAGGGTTTGTTACTCTAACTCTTGTTaGATAACTGCTTATCAGCAACTTCTCAAAGGTCGA +
Preference number: 4 (lower is better)
Translates to: QRGGRVCYSNSC*ITAYQQLLKGR
Trigger: TCGACCTTTGAGAAGTTGCTGATAAGCAGTTATCAAACAAGAGTTAGAGTAACAAACCCTCCCACCTCGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR TCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCTAGCAATCGAGGTGTaGTCTTCCTGCCAGCTCGTA +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSLAIEV*SSCQLV
Trigger: TACGAGCTGGCAGGAAGATCACACCTCGATTGCTAG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATATTCAGCCTGAGACTTaGAGTAAGTTTCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDIQPET*SKFLVG
Trigger: CCCCACAAGAAACTTACTTCAAGTCTCAGGCTGAAT...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCCTGTCCGTGCATATTaGGTCTGGGATGGTGACTCT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSPVRAY*VWDGDS
Trigger: AGAGTCACCATCCCAGACTCAATATGCACGGACAGG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTTGTCCATCCACTATTTaGCATCCTGGGGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISCPSTI*HPGGHR
Trigger: CCGATGACCCCCAGGATGTCAAATAGTGGATGGACA...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATTATGTTGTCAATTCTTaGAACGAATCCATGAGCCCT +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYYVVNS*NESMSP
Trigger: AGGGCTCATGGATTCGTTTCAAGAATTGACAACATA...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGAATGGGATCCATCAGTaGTTGGTGTTCCTTCAATTG +
Preference number: 4 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLNGIHQ*LVFLQL
Trigger: CAATTGAAGGAACACCAATCACTGATGGATCCCATT...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATGCGATGATGTTAGGGTaGTTCAACTTCCTCAAATGC +
Preference number: 4 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDAMMLG*FNFLKC
Trigger: GCATTTGAGGAAGTTGAAGCACCCTAACATCATCGC...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TTCATTCCACTTGCAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTGATCATAATTCATTCCACTTaGAATTCCTGTGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: FIPLAIPVDQSTSNRGVIIIHST*NSCGPV
Trigger: GACTGGTCCACAGGAATTGCAAGTGGAATGAATTAT...GATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTGGAATGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR GCA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCACCATCCATGCGACCGTaGCAGCAAATGACATCTTGG +
Preference number: 4 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSPSMRP*QQMTSW
Trigger: CCAAGATGTCATTTGCTGGCACGGTCGCATGGATGG...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCCATCCATGCGACCGTaGCAGCAAATGACATCTTGG +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHPSMRP*QQMTSW
Trigger: CCAAGATGTCATTTGCTGGCACGGTCGCATGGATGG...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCCATCCATGCGACCGTaGCAGCAAATGACATCTTGG +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSPSMRP*QQMTSW
Trigger: CCAAGATGTCATTTGCTGGCACGGTCGCATGGATGG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCAAAGTCACTATGGCTaGCTCTGCTATTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISQSHYG*LCYSLG
Trigger: GCCGAGGGAATAGCAGAGGCAGCCATAGTGACTTTG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGGGGGCTGCTGGTATTaGTGCTGCAGAGAATTATGG +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHGGCWY*CCRELW
Trigger: CCATAATTCTCTGCAGCAGCAATACCAGCAGCCCCC...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCACTTCTCCAGCAGTCTaGAGCCATGGCTGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSTSPAV*SHGCGD
Trigger: ATCTCCACAGCCATGGCTGCAGACTGCTGGAGAAGT...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATACTTCTCCAGCAGTCTaGAGCCATGGCTGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHTSPAV*SHGCGD
Trigger: ATCTCCACAGCCATGGCTGCAGACTGCTGGAGAAGT...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTACTTCTCCAGCAGTCTaGAGCCATGGCTGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISTSPAV*SHGCGD
Trigger: ATCTCCACAGCCATGGCTGCAGACTGCTGGAGAAGT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCATACTGTTCTGGCCTaGACTGAAGGCAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISHTVLA*TEGRGH
Trigger: ATGACCCCTGCCTTCAGTGCAGGCCAGAACAGTATG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCATACTGTTCTGGCCTaGACTGAAGGCAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHHTVLA*TEGRGH
Trigger: ATGACCCCTGCCTTCAGTGCAGGCCAGAACAGTATG...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCCTCCACACACAGCTTaGCCAGAGACATCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSPPHTA*PETSES
Trigger: AGACTCAGATGTCTCTGGGCAAGCTGTGTGTGGAGG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCCTCCACACACAGCTTaGCCAGAGACATCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISPPHTA*PETSES
Trigger: AGACTCAGATGTCTCTGGGCAAGCTGTGTGTGGAGG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTCTCCTCCTCAGTACTaGCCCCCAACCTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHSPPQY*PPTFVP
Trigger: AGGAACAAAGGTTGGGGGGCAGTACTGAGGAGGAGA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTCAAGCTGCTTGTTTTTaGTTTTATTCTGACAGTGGT +
Preference number: 4 (lower is better)
Translates to: LASSSFSVGAPHHLANRSQAACF*FYSDSG
Trigger: ACCACTGTCAGAATAAAAGCAAAAACAAGCAGCTTG...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TATGGAGGTGCAAATAATTCATTCCACTTGCAATTCCTGTGGACCAGTCTACTAACGCTGTTCTCAAACTaGTCCCTGGAATCCTCACTT +
Preference number: 4 (lower is better)
Translates to: YGGANNSFHLQFLWTSLLTLFSN*SLESSL
Trigger: AAGTGAGGATTCCAGGGACCAGTTTGAGAACAGCGT...TAGTAGACTGGTCCACAGGAATTGCAAGTGGAATGAATTATTTGCACCTCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAGAAGGAACTGGAAGGTaGAGGCTGTTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSEGTGR*RLLLPT
Trigger: TGTTGGAAGCAACAGCCTCCACCTTCCAGTTCCTTC...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGCAAGTGGAAGGAACTaGAAGGTGGAGGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSASGRN*KVEAVA
Trigger: AGCAACAGCCTCCACCTTCCAGTTCCTTCCACTTGC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GGGACGTATTTGCCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAAATCCATCAGGGCAAGTaGAAGGAACTGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GTYLPKTRFDTICKPHYQIHQGK*KELEGG
Trigger: TCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGAT...TTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCCATGGCATTGGGATaGATGATAGGACGAACAGGG +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSSMALG*MIGRTG
Trigger: CCCTGTTCGTCCTATCATCCATCCCAATGCCATGGA...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGAGCCACTTCTGTGGTaGGGATCCCTTCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHEPLLW*GSLLIS
Trigger: TGAGATCAGAAGGGATCCCCACCACAGAAGTGGCTC...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCTATTCCCTCGGCGGTaGCGTGGTTTGCTTCGATAT +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHLFPRR*RGLLRY
Trigger: ATATCGAAGCAAACCACGCCACCGCCGAGGGAATAG...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCTATTCCCTCGGCGGTaGCGTGGTTTGCTTCGATAT +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISLFPRR*RGLLRY
Trigger: ATATCGAAGCAAACCACGCCACCGCCGAGGGAATAG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACAATACCTCAGGTTGTTaGCGCAGGTTGCTATGTCCT +
Preference number: 4 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYNTSGC*RRLLCP
Trigger: AGGACATAGCAACCTGCGCCAACAACCTGAGGTATT...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTATGTGCTGGTGACTTaGAAAGGTCAGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHYVLVT*KGQGSS
Trigger: GGAGGAGCCCTGACCTTTCCAAGTCACCAGCACATA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATTCAGGACTGTTTGAGTaGTCACTGGTATTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDSGLFE*SLVFPS
Trigger: AGAGGGAAATACCAGTGACCACTCAAACAGTCCTGA...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATTTCTTTAGTCACTTATaGCCAAAAGACCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDFFSHL*PKDLVP
Trigger: GGGGACCAGGTCTTTTGGCCATAAGTGACTAAAGAA...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTTGTTCACAAGTTGCCTaGAATTGCTTTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LASSSFSVGAPHHLANRSCSQVA*NCFSFA
Trigger: AGCAAAAGAAAAGCAATTCCAGGCAACTTGTGAACA...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTAGTAGACAAGCAACCTaGCTCCAGAGAGGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISSRQAT*LQRGVV
Trigger: AACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGAAGGTGGGCAAGAATTaGACAAAACTGCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLKVGKN*TKLPVF
Trigger: AAACACTGGCAGTTTTGTCCAATTCTTGCCCACCTT...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCCCACTTCCAGAGTCTaGGAAGTGGTCACTCTGAAG +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHPTSRV*EVVTLK
Trigger: CTTCAGAGTGACCACTTCCCAGACTCTGGAAGTGGG...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 72 bp ATACATCCTAGCTGCCTTCAAAGTCTGTTCTCCTGCTaGAATCAATATGACTCAAGTAGACAAGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: IHPSCLQSLFSC*NQYDSSRQATW
Trigger: CCAGGTTGCTTGTCTACTTGAGTCATATTGATTCAAGCAGGAGAACAGACTTTGAAGGCAGCTAGGATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTCACTGCCTGACCTGCTaGACTGAATCTTTATGTCTT +
Preference number: 4 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFHCLTC*TESLCL
Trigger: AAGACATAAAGATTCAGTTCAGCAGGTCAGGCAGTG...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TTCATTCCACTTGCAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTGATCGATTTGAGATCACGATaGATAATTTTATGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: FIPLAIPVDQSTSNRGVIDLRSR*IILWRC
Trigger: GCACCTCCATAAAATTATTCATCGTGATCTCAAATC...GATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTGGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR TCA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATTGCATCCCAGATTTGTaGGGCACTCCTTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYCIPDL*GTPFLF
Trigger: GAAAAGGAAAGGAGTGCCTCACAAATCTGGGATGCA...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGCATCCCAGATTTGTaGGGCACTCCTTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSCIPDL*GTPFLF
Trigger: GAAAAGGAAAGGAGTGCCTCACAAATCTGGGATGCA...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GGGACGTATTTGCCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAACTCATCAGGACTGTTTaGGTGGTCACTGGTATTTCC +
Preference number: 4 (lower is better)
Translates to: GTYLPKTRFDTICKPHYQLIRTV*VVTGIS
Trigger: GGAAATACCAGTGACCACTCAAACAGTCCTGATGAG...TTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTGAGCCCATCCGAGTGTaGGGATATGTCAATGGGAAT +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISEPIRV*GYVNGN
Trigger: ATTCCCATTGACATATCCTCACACTCGGATGGGCTC...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATAGAACACTCCCCATCTaGAGAGTCACAGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHRTLPI*RVTVRF
Trigger: GAATCGGACTGTGACTCTTCAGATGGGGAGTGTTCT...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTAGAACACTCCCCATCTaGAGAGTCACAGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISRTLPI*RVTVRF
Trigger: GAATCGGACTGTGACTCTTCAGATGGGGAGTGTTCT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATCTCTCGACTATACAATaGATGACTGAGATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDLSTIQ*MTEIQP
Trigger: TGGCTGAATCTCAGTCATTCATTGTATAGTCGAGAG...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCTCCAAGTGCTATGTTaGGAGGTTCTGAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSLQVLC*EVLRLC
Trigger: ACACAGCCTCAGAACCTCTCAACATAGCACTTGGAG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GATTATAAGGAAAGCCTGAAAAATCTTAAAATCTCCGATGGCTGGGCTTTGGTTCAAAAACGTGGTACTTaGTGCTCTCCCAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: DYKESLKNLKISDGWALVQKRGT*CSPRVL
Trigger: TAGCACTCTGGGAGAGCATCAAGTACCACGTTTTTG...AACCAAAGCCCAGCCATCGGAGATTTTAAGATTTTTCAGGCTTTCCTTATAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGCTATGTCCTGTCCGTaGATATTGAGTCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSAMSCP*ILSLGW
Trigger: CCATCCCAGACTCAATATGCACGGACAGGACATAGC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTGCTATGTCCTGTCCGTaGATATTGAGTCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISAMSCP*ILSLGW
Trigger: CCATCCCAGACTCAATATGCACGGACAGGACATAGC...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATTCATGTTCCTGTTATTaGAGCTCATTTCTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDSCSCY*SSFLGG
Trigger: ACCCCCTAGAAATGAGCTGCAATAACAGGAACATGA...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCATAGCACACTCTACTaGAGAGCAGGGCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISHSTLY*RAGQEF
Trigger: GAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGGACGTATTTGCCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAAATCTTCCTAATAGCTTaGACATGCTGGCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GTYLPKTRFDTICKPHYQIFLIA*TCWLGF
Trigger: GAACCCCAGCCAGCATGTGCAAGCTATTAGGAAGAT...TTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TTGGAAGCTACCAACCAACACAGCGAGGTGGGAGGGTTTGTTACTCTAACTCTTCTCTTGTTTGATAACTaGTTATCAGCAACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LEATNQHSEVGGFVTLTLLLFDN*LSATSQ
Trigger: TTGAGAAGTTGCTGATAAGCAGTTATCAAACAAGAG...AAGAGTTAGAGTAACAAACCCTCCCACCTCGCTGTGTTGGTTGGTAGCTTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR CCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTGGATGTAAATTGGGCTaGTTTAGGATTCCGCACAGA +
Preference number: 4 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFGCKLG*FRIPHR
Trigger: TCTGTGCGGAATCCTAAACCAGCCCAATTTACATCC...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGAAGGAACTGGAAGGTaGAGGCTGTTGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHEGTGR*RLLLPT
Trigger: TGTTGGAAGCAACAGCCTCCACCTTCCAGTTCCTTC...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCATCCATCAGGGCAAGTaGAAGGAACTGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSIHQGK*KELEGG
Trigger: TCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGAT...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATATCCATCAGGGCAAGTaGAAGGAACTGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHIHQGK*KELEGG
Trigger: TCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGAT...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACGAAGTAAGTTTCTTGTaGGGTGGCAAGTACATCTGC +
Preference number: 4 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYEVSFL*GGKYIC
Trigger: GCAGATGTACTTGCCACCCCACAAGAAACTTACTTC...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTCCATGGCATTGGGATaGATGATAGGACGAACAGGG +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHSMALG*MIGRTG
Trigger: CCCTGTTCGTCCTATCATCCATCCCAATGCCATGGA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCCATGGCATTGGGATaGATGATAGGACGAACAGGG +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSSMALG*MIGRTG
Trigger: CCCTGTTCGTCCTATCATCCATCCCAATGCCATGGA...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GGGACGTATTTGCCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAAACAAGTCTGGCCGTTTaGTCTGCATCCCAGATTTGT +
Preference number: 4 (lower is better)
Translates to: GTYLPKTRFDTICKPHYQTSLAV*SASQIC
Trigger: ACAAATCTGGGATGCAGACCAAACGGCCAGACTTGT...TTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAACAAGTCTGGCCGTTTaGTCTGCATCCCAGATTTGT +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSTSLAV*SASQIC
Trigger: ACAAATCTGGGATGCAGACCAAACGGCCAGACTTGT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGTGAGGATATGTCAATaGGAATCTCTGGCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSVRICQ*ESLASG
Trigger: CCCAGACGCCAGAGATTCCCATTGACATATCCTCAC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATTTCAATGTCTTGCTCTaGCTCTTCTTTAGTCACTTA +
Preference number: 4 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYFNVLL*LFFSHL
Trigger: TAAGTGACTAAAGAAGAGCCAGAGCAAGACATTGAA...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATGACGGTAATCTGTCTTaGAGACAGGGACAGGTACTA +
Preference number: 4 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYDGNLS*RQGQVL
Trigger: TAGTACCTGTCCCTGTCTCCAAGACAGATTACCGTC...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TCTTGTTTGATAACTGCTTATCAGCAACTTCTCAAAGGTCGACTTAAATGTGTTTCTGAACAGACAGCATaGAACTACCAGCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SCLITAYQQLLKGRLKCVSEQTA*NYQQPP
Trigger: TGGCGGCTGCTGGTAGTTCCATGCTGTCTGTTCAGA...AACACATTTAAGTCGACCTTTGAGAAGTTGCTGATAAGCAGTTATCAAACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
3UTR CAA 72 bp AGATGTAAGATAAAAGCTGACCCTCATGTTTCTCTGTaGCCACTAAAGGTGGGCAAGAATTGGACAAAACTG +
Preference number: 4 (lower is better)
Translates to: RCKIKADPHVSL*PLKVGKNWTKL
Trigger: CAGTTTTGTCCAATTCTTGCCCACCTTTAGTGGCAACAGAGAAACATGAGGGTCAGCTTTTATCTTACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTTGGGACAGAGTTCTaGCTTAAGAGAGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHFGTEF*LKRGLQ
Trigger: TTGGAGCCCTCTCTTAAGTCAGAACTCTGTCCCAAA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TATGGAGGTGCAAATAATTCATTCCACTTGCAATTCCTGTGGACCAGTCTACTAACCAAAGTCCTGAGATaGCACTCAGAAGATTTTTGG +
Preference number: 4 (lower is better)
Translates to: YGGANNSFHLQFLWTSLLTKVLR*HSEDFW
Trigger: CCAAAAATCTTCTGAGTGTCATCTCAGGACTTTGGT...TAGTAGACTGGTCCACAGGAATTGCAAGTGGAATGAATTATTTGCACCTCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR TCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACCCTGACCTGCTGAACTaGATCTTTATGTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYPDLLN*IFMSSV
Trigger: AACTGAAGACATAAAGATTCAGTTCAGCAGGTCAGG...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGACCGTGCCAGCAAATaGCATCTTGGTACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSDRASK*HLGTFV
Trigger: GACAAAAGTACCAAGATGTCATTTGCTGGCACGGTC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGACCGTGCCAGCAAATaGCATCTTGGTACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHDRASK*HLGTFV
Trigger: GACAAAAGTACCAAGATGTCATTTGCTGGCACGGTC...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTTGCATCCCAGATTTGTaGGGCACTCCTTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISCIPDL*GTPFLF
Trigger: GAAAAGGAAAGGAGTGCCTCACAAATCTGGGATGCA...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCTCATCAGGACTGTTTaGGTGGTCACTGGTATTTCC +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHLIRTV*VVTGIS
Trigger: GGAAATACCAGTGACCACTCAAACAGTCCTGATGAG...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAGCGATGATGTTAGGGTaGTTCAACTTCCTCAAATGC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSAMMLG*FNFLKC
Trigger: GCATTTGAGGAAGTTGAAGCACCCTAACATCATCGC...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000443863.5
CDS-3UTR GCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACAAATGCATGAGTGTCTaGCGAAAAGAAGGTCGGTTT +
Preference number: 4 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYKCMSV*RKEGRF
Trigger: AAACCGACCTTCTTTTCGGCAGACACTCATGCATTT...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTCCCGCATTTCTAGCTaGAGCATGATGGCACTCAAT +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHSRISS*SMMALN
Trigger: ATTGAGTGCCATCATGCTGCAGCTAGAAATGCGGGA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTCTTTTCCACTGCTTaGTCACGCTTAATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSFFSTA*SRLMSS
Trigger: GGAGCTCATTAAGCGTGAGCAAGCAGTGGAAAAGAA...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGGGGTGGATCTGAAATaGCAGTATAGTCACGAGATC +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSGVDLK*QYSHEI
Trigger: GATCTCGTGACTATACTGGCATTTCAGATCCACCCC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACTTGAAGACATTGGGTaGAAGTATCTGGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSLEDIG*KYLVTR
Trigger: TCTGGTGACCAGATACTTGCACCCAATGTCTTCAAG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAAATCCTTCCTATCCCTaGTCAGCATCCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSNPSYP*SASLVL
Trigger: AAGAACAAGGGATGCTGAGCAGGGATAGGAAGGATT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCAGGCAAGATCTCATCATaGTCCTCAGAATGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSGKISS*SSECCA
Trigger: TGCACAGCATTCTGAGGAGCATGATGAGATCTTGCC...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTAAAAGTCTGGGTTGGTaGCAGGTAAATCCCAAACCC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISKSLGW*QVNPKP
Trigger: GGGTTTGGGATTTACCTGGCACCAACCCAGACTTTT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACACTTGCAATTCCTGTaGACCAGTCTACTAGCAATC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSHLQFL*TSLLAI
Trigger: GATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTACAAGTCTGGCCGTTTaGTCTGCATCCCAGATTTGT +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISTSLAV*SASQIC
Trigger: ACAAATCTGGGATGCAGACCAAACGGCCAGACTTGT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTTTCCTGGGCTGGCTaGTTTTTCAAGATTGCGGCA +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHFSWAG*FFKIAA
Trigger: TGCCGCAATCTTGAAAAACCAGCCAGCCCAGGAAAA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCTTGGTGCAGGTAAGTaGGATGGGGTGAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSLGAGK*DGVNFP
Trigger: AGGAAAATTCACCCCATCCCACTTACCTGCACCAAG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCTTGGTGCAGGTAAGTaGGATGGGGTGAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHLGAGK*DGVNFP
Trigger: AGGAAAATTCACCCCATCCCACTTACCTGCACCAAG...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTAATACCTCAGGTTGTTaGCGCAGGTTGCTATGTCCT +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISNTSGC*RRLLCP
Trigger: AGGACATAGCAACCTGCGCCAACAACCTGAGGTATT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAAAGGTTGAATATGACTaGCAGCTGCTGATACAGCGA +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSKVEYD*QLLIQR
Trigger: TCGCTGTATCAGCAGCTGCCAGTCATATTCAACCTT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATAACAAAGGGATGGTTTaGGCTCAGACATTGTATAGA +
Preference number: 4 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDNKGMV*AQTLYR
Trigger: TCTATACAATGTCTGAGCCCAAACCATCCCTTTGTT...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGATAAAAACAAAGGGATaGTTTGGGCTCAGACATTGT +
Preference number: 4 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLIKTKG*FGLRHC
Trigger: ACAATGTCTGAGCCCAAACCATCCCTTTGTTTTTAT...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGACGCTAACGGAACATaGACATTCATCCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHDANGT*TFIPRW
Trigger: CCATCTTGGGATGAATGTCCATGTTCCGTTAGCGTC...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAAAAAATTGTTGTGCATaGTGGCACACACCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSKNCCA*WHTPVV
Trigger: GACCACAGGTGTGTGCCACCATGCACAACAATTTTT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGAATGTCACATTGTTTTaGTACATGAGTCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLNVTLF*YMSLTE
Trigger: CTCTGTGAGACTCATGTACCAAAACAATGTGACATT...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCAATCAGAAAACAACACTaGGAGCTGGGGACTGACAGT +
Preference number: 4 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSIRKQH*ELGTDS
Trigger: ACTGTCAGTCCCCAGCTCCCAGTGTTGTTTTCTGAT...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATGACGTCACAGATTCATaGATGGATGTAAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYDVTDS*MDVNWA
Trigger: AGCCCAATTTACATCCATTCATGAATCTGTGACGTC...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACAATGTCTAAATGCATaGGTGTCTGCCGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSQCLNA*VSAEKK
Trigger: CTTCTTTTCGGCAGACACTCATGCATTTAGACATTG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTATTCAGCCTGAGACTTaGAGTAAGTTTCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISIQPET*SKFLVG
Trigger: CCCCACAAGAAACTTACTTCAAGTCTCAGGCTGAAT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCATTCAGCCTGAGACTTaGAGTAAGTTTCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSIQPET*SKFLVG
Trigger: CCCCACAAGAAACTTACTTCAAGTCTCAGGCTGAAT...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTTTCTAGCTGCAGCATaGTGGCACTCAATTCCATGT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSFLAAA*WHSIPC
Trigger: ACATGGAATTGAGTGCCATCATGCTGCAGCTAGAAA...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCAGACCTACAGCCGCTaGATTCATTTTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSQTYSR*IHFLPF
Trigger: AAACGGAAGAAAATGAATTCAGCGGCTGTAGGTCTG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAGATCCCTGCCATTCTTaGTTGAAATGTTCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSDPCHS*LKCSVR
Trigger: TCTCACTGAACATTTCAATCAAGAATGGCAGGGATC...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR TCA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACACCCAGGAGCTTTCATaGTCAAGTCAAAATCACAAT +
Preference number: 4 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYTQELS*SSQNHN
Trigger: ATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGT...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTCTAATCCACCAAGCTaGAGTCTGAACAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHSNPPS*SLNRQH
Trigger: ATGCTGTCTGTTCAGACTTCAGCTTGGTGGATTAGA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443863.5
CDS-3UTR GCA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATGTAATCAGTGGAATATaGCTTCCCAATGATATTCCA +
Preference number: 4 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDVISGI*LPNDIP
Trigger: TGGAATATCATTGGGAAGGCATATTCCACTGATTAC...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp AGTACAAACACCCTTGAATGCGATGATGTTAGGGTGCTTCAACTTCCTCAAATGTTCAACTTCCTCAAATaGTTGATATCCGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: STNTLECDDVRVLQLPQMFNFLK*LISVSF
Trigger: GAATGAGACGGATATCAAGCATTTGAGGAAGTTGAA...CATTTGAGGAAGTTGAAGCACCCTAACATCATCGCATTCAAGGGTGTTTGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCTCCACTCTTCTaGAGAGGCCTTGTTTTTCGA +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSSSPLF*RGLVFR
Trigger: TCGAAAAACAAGGCCTCTGCAGAAGAGTGGAGATGA...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTCATCTCCACTCTTCTaGAGAGGCCTTGTTTTTCGA +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHSSPLF*RGLVFR
Trigger: TCGAAAAACAAGGCCTCTGCAGAAGAGTGGAGATGA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCACATACATCCTAGCTaGCTTCAAAGTCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISHIHPS*LQSLFS
Trigger: GGAGAACAGACTTTGAAGGCAGCTAGGATGTATGTG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCACTTGCAATTCCTGTaGACCAGTCTACTAGCAATC +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSHLQFL*TSLLAI
Trigger: GATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGAAGTAAGTTTCTTGTaGGGTGGCAAGTACATCTGC +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHEVSFL*GGKYIC
Trigger: GCAGATGTACTTGCCACCCCACAAGAAACTTACTTC...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTGAAGTAAGTTTCTTGTaGGGTGGCAAGTACATCTGC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISEVSFL*GGKYIC
Trigger: GCAGATGTACTTGCCACCCCACAAGAAACTTACTTC...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGTTTTCTCAGAACTCTaGGCGTTTTCCAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSVFSEL*AFSKRG
Trigger: TCCTCTCTTGGAAAACGCCCAGAGTTCTGAGAAAAC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTGGGCCTCTGTCTTCGTaGAAATTCAACTTCACTATC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISGPLSS*KFNFTI
Trigger: GATAGTGAAGTTGAATTTCCACGAAGACAGAGGCCC...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGGGCCTCTGTCTTCGTaGAAATTCAACTTCACTATC +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHGPLSS*KFNFTI
Trigger: GATAGTGAAGTTGAATTTCCACGAAGACAGAGGCCC...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATAAGGTTGAATATGACTaGCAGCTGCTGATACAGCGA +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHKVEYD*QLLIQR
Trigger: TCGCTGTATCAGCAGCTGCCAGTCATATTCAACCTT...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATATTCTTCAAACTGCATaGGGTTCTCATAGCCACGTT +
Preference number: 4 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYILQTA*GSHSHV
Trigger: AACGTGGCTATGAGAACCCCATGCAGTTTGAAGAAT...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 72 bp GACCGTACAAGTCAAAGTCTCGAAAAGAATGTCACATaGTTTTGGTACATGAGTCTCACAGAGTCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: DRTSQSLEKNVT*FWYMSLTESKK
Trigger: CTTCTTAGACTCTGTGAGACTCATGTACCAAAACAATGTGACATTCTTTTCGAGACTTTGACTTGTACGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCACCAAAGTCCTGAGATaGCACTCAGAAGATTTTTGG +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSTKVLR*HSEDFW
Trigger: CCAAAAATCTTCTGAGTGTCATCTCAGGACTTTGGT...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATACATGCGTCCTCAGATaGTTGTTGTACACAGAAAAT +
Preference number: 4 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYTCVLR*LLYTEN
Trigger: ATTTTCTGTGTACAACAATCATCTGAGGACGCATGT...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAATAATTCATTCCACTTaGAATTCCTGTGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSIIHST*NSCGPV
Trigger: GACTGGTCCACAGGAATTGCAAGTGGAATGAATTAT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCAAATGCATGAGTGTCTaGCGAAAAGAAGGTCGGTTT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSKCMSV*RKEGRF
Trigger: AAACCGACCTTCTTTTCGGCAGACACTCATGCATTT...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTCATGTTCCTGTTATTaGAGCTCATTTCTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHSCSCY*SSFLGG
Trigger: ACCCCCTAGAAATGAGCTGCAATAACAGGAACATGA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTCAAAGTCTGTTCTCCTaGTTGAATCAATATGACTCA +
Preference number: 4 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFQSLFS*LNQYDS
Trigger: TGAGTCATATTGATTCAAGCAGGAGAACAGACTTTG...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAACAGGCAGGACCTCATaGTTTTGGCAATGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSTGRTS*FWQCKN
Trigger: ATTTTTACATTGCCAAAAGCATGAGGTCCTGCCTGT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCATTCTTCAAACTGCATaGGGTTCTCATAGCCACGTT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSILQTA*GSHSHV
Trigger: AACGTGGCTATGAGAACCCCATGCAGTTTGAAGAAT...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TCTTGTTTGATAACTGCTTATCAGCAACTTCTCAAAGGTCGACTTAAATGTGTTCATTTACAGTGGCCTTaGAAGCTACCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: SCLITAYQQLLKGRLKCVHLQWP*KLPTNT
Trigger: TGTGTTGGTTGGTAGCTTCCAAGGCCACTGTAAATG...AACACATTTAAGTCGACCTTTGAGAAGTTGCTGATAAGCAGTTATCAAACAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
3UTR CAA 72 bp TTCTGGAATGTTCCATCAAATATTTTTGGACTGCTGTaGAGCGTAACTGAAACCATGAAAATGAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: FWNVPSNIFGLL*SVTETMKMKPW
Trigger: CCATGGCTTCATTTTCATGGTTTCAGTTACGCTCAACAGCAGTCCAAAAATATTTGATGGAACATTCCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATACTACTGCTGAGTGCTaGAACTTTCTTTTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHTTAEC*NFLFSS
Trigger: ACTACTGAAAAGAAAGTTTCAGCACTCAGCAGTAGT...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443863.5
CDS-3UTR GCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCATAATTCATTCCACTTaGAATTCCTGTGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSIIHST*NSCGPV
Trigger: GACTGGTCCACAGGAATTGCAAGTGGAATGAATTAT...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTATAATTCATTCCACTTaGAATTCCTGTGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISIIHST*NSCGPV
Trigger: GACTGGTCCACAGGAATTGCAAGTGGAATGAATTAT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATATACTTCTTTTCCACTaGTTGCTCACGCTTAATGAG +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHILLFH*LLTLNE
Trigger: CTCATTAAGCGTGAGCAAGCAGTGGAAAAGAAGTAT...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGATAATACAATAACATaGGGCCTGAGTACAAACACC +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSDNTIT*GLSTNT
Trigger: GGTGTTTGTACTCAGGCCCCATGTTATTGTATTATC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTTTACCGCATCTGTGTaGGTCACTAAAACATTAGGT +
Preference number: 4 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSFTASV*VTKTLG
Trigger: ACCTAATGTTTTAGTGACCCACACAGATGCGGTAAA...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CCA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTCATTTTCATGTGCATTaGAAATGGTTTAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFHFHVH*KWFNSC
Trigger: ACAGCTGTTAAACCATTTCCAATGCACATGAAAATG...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR TCA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTGATTTGAGATCACGATaGATAATTTTATGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISDLRSR*IILWRC
Trigger: GCACCTCCATAAAATTATTCATCGTGATCTCAAATC...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR GCA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCAAAATGTTCAATGTCTTaGTCTGGCTCTTCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSKCSMS*SGSSLV
Trigger: GACTAAAGAAGAGCCAGAGCAAGACATTGAACATTT...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAAAAATCAGAACCAAATaGTCATCTGCAACCCAAATT +
Preference number: 4 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSKIRTK*SSATQI
Trigger: AATTTGGGTTGCAGATGAGCATTTGGTTCTGATTTT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR GCA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGGCAACATTTTCATGTaGATTGGAAATGGTTTAACA +
Preference number: 4 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHGNIFM*IGNGLT
Trigger: TGTTAAACCATTTCCAATGCACATGAAAATGTTGCC...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
3UTR CAA 72 bp CATTTAAAAATGAAACCAGCTTCCACATACACAGGTTaGTTTGTTTGTTTGTTTGTCTGTTTTTCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: HLKMKPASTYTG*FVCLFVCFSLL
Trigger: TAGGAGGGAAAAACAGACAAACAAACAAACAAACAAACCTGTGTATGTGGAAGCTGGTTTCATTTTTAAATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp GCTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCCGCACGGCACACTCCTaGTCAGAGAGCCCATCCGAG +
Preference number: 5 (lower is better)
Translates to: APQGCCWAEIPQVVGAGCRTAHS*SESPSE
Trigger: CTCGGATGGGCTCTCTGACAAGGAGTGTGCCGTGCG...GCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp CTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCTCGGCGGTGGCGTGGTTaGCTTCGATATCGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: LRRAAAGPKYLRLLAQVARRWRG*LRYRLL
Trigger: CAAGAGCCGATATCGAAGCAAACCACGCCACCGCCG...AGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp ACAGCTTGCCCAGAGACATCTGAGTCTTCACACGGCGCACGGCACACTCCTTGTGCCCCAGGGACCAGCTaGGCCCTTGTCAGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: TACPETSESSHGARHTPCAPGTS*ALVRLR
Trigger: TCTGAGCCTGACAAGGGCCAAGCTGGTCCCTGGGGC...ACAAGGAGTGTGCCGTGCGCCGTGTGAAGACTCAGATGTCTCTGGGCAAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGCCCCAGGGACCAGCTaGGCCCTTGTCAGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: VSLPRQNAGREWDESGGGAPGTS*ALVRLR
Trigger: TCTGAGCCTGACAAGGGCCAAGCTGGTCCCTGGGGC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS CCA 90 bp ATGGCCACCTCTTCCGCCCGGAACTTGCCCAAGAAGACCGCTCCTTaGGCTCCACTACCCAGCCACTGCAGCTCTGAGATCTCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: MATSSARNLPKKTAP*APLPSHCSSEISSN
Trigger: ATTTGAGGAGATCTCAGAGCTGCAGTGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAGAGGTGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000433092.5
ENST00000443863.5
ENST00000477582.1
CDS-3UTR CAA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTGGTCCTCGAGCAGCTaGGGAGAAGGGTGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: SFRITSGAIHATVPANDIWSSSS*GEGWFP
Trigger: GGGGAACCACCCTTCTCCCAAGCTGCTCGAGGACCA...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CAA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGCCCCAGGGACCAGCTaGGCCCTTGTCAGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIAPGTS*ALVRLR
Trigger: TCTGAGCCTGACAAGGGCCAAGCTGGTCCCTGGGGC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTCTTCCGCCCGGAACTaGCCCAAGAAGACCGCTCCT +
Preference number: 5 (lower is better)
Translates to: SFRITSGAIHATVPANDISSARN*PKKTAP
Trigger: AGGAGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAGA...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CAA 90 bp CTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTCAGACCTACAGCCGCCTTCTTTTCCACTGCTaGCTCACGCTTAATGAGCTC +
Preference number: 5 (lower is better)
Translates to: LEGCRDERCRGMTQTYSRLLFHC*LTLNEL
Trigger: GAGCTCATTAAGCGTGAGCAAGCAGTGGAAAAGAAG...GCGGCTGTAGGTCTGAGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp CTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCTAACAAGTCTGGCCGTTaGGTCTGCATCCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: LRRAAAGPKYLRLLAQVANKSGR*VCIPDL
Trigger: CAAATCTGGGATGCAGACCAAACGGCCAGACTTGTT...AGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp GGTTGCTATGTCCTGTCCGTGCATATTGAGTCTGGGATGGTGACTCTGGGACATTGGTCCTCGAGCAGCTaGGGAGAAGGGTGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: GCYVLSVHIESGMVTLGHWSSSS*GEGWFP
Trigger: GGGGAACCACCCTTCTCCCAAGCTGCTCGAGGACCA...ATGTCCCAGAGTCACCATCCCAGACTCAATATGCACGGACAGGACATAGCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGTGTCTTCAGTTCCGCTaGTGCTCTCTCCGTCCACCG +
Preference number: 5 (lower is better)
Translates to: FRITSGAIHATVPANDILCLQFR*CSLRPP
Trigger: CGGTGGACGGAGAGAGCACAAGCGGAACTGAAGACA...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CAA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTGTCTTCAGTTCCGCTaGTGCTCTCTCCGTCCACCG +
Preference number: 5 (lower is better)
Translates to: SFRITSGAIHATVPANDICLQFR*CSLRPP
Trigger: CGGTGGACGGAGAGAGCACAAGCGGAACTGAAGACA...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CAA 90 bp CTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCTGCTGGTTTTTCAAGATaGCGGCAAAGTCACTATGGC +
Preference number: 5 (lower is better)
Translates to: LRRAAAGPKYLRLLAQVAAGFSR*RQSHYG
Trigger: GCCATAGTGACTTTGCCGCAATCTTGAAAAACCAGC...AGCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS TCA 90 bp ACTGGTCCCTGGAATCCTCACTTACGCTCGTCAACACTGTTGTGGTaGCGGGGCTGTGCACGCTCTCGATTAGCTCTGTTCGTACCATCC +
Preference number: 5 (lower is better)
Translates to: TGPWNPHLRSSTLLW*RGCARSRLALFVPS
Trigger: GGATGGTACGAACAGAGCTAATCGAGAGCGTGCACAGCCCCGTCACCACAACAGTGTTGACGAGCGTAAGTGAGGATTCCAGGGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS-3UTR CAA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACAGGGGGCTGCTGGTATaGCTGCTGCAGAGAATTATG +
Preference number: 5 (lower is better)
Translates to: GSFRITSGAIHATVPANDRGLLV*LLQRIM
Trigger: CATAATTCTCTGCAGCAGCAATACCAGCAGCCCCCT...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp GGCCAAAGCAGGAGGATCGCTAGAGCCCAGAGTTCGATACCAGCCTGGGCAACATGCAGTGAACTGAGATaGTGCCATTGCACTCTAGCC +
Preference number: 5 (lower is better)
Translates to: GQSRRIARAQSSIPAWATCSELR*CHCTLA
Trigger: GGCTAGAGTGCAATGGCACAATCTCAGTTCACTGCA...TGTTGCCCAGGCTGGTATCGAACTCTGGGCTCTAGCGATCCTCCTGCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS GCA 90 bp TCTTTATGTCTTCAGTTCCGCTTGTGCTCTCTCCGTCCACCGTGTTaGTGTTCCCCTGAGACACCGCCGTCTCTGATTCATCGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: SLCLQFRLCSLRPPC*CSPETPPSLIHRVP
Trigger: GGGAACACGATGAATCAGAGACGGCGGTGTCTCAGGGGAACAGCAACACGGTGGACGGAGAGAGCACAAGCGGAACTGAAGACATAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS GCA 90 bp AACTTGCCCAAGAAGACCGCTCCTTGGGCTCCACTACCCAGCCACTaGAGCTCTGAGATCTCCTCAAATGGCACTTCCCAAGTATCTTGC +
Preference number: 5 (lower is better)
Translates to: NLPKKTAPWAPLPSH*SSEISSNGTSQVSC
Trigger: GCAAGATACTTGGGAAGTGCCATTTGAGGAGATCTCAGAGCTGCAGTGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTTGGGCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000424227.5
CDS GCA 90 bp AACTTGCCCAAGAAGACCGCTCCTTGGGCTCCACTACCCAGCCACTaGAGCTCTGAGATCTCCTCAAATGGCACTTCCCAAGTATCTGCT +
Preference number: 5 (lower is better)
Translates to: NLPKKTAPWAPLPSH*SSEISSNGTSQVSA
Trigger: AGCAGATACTTGGGAAGTGCCATTTGAGGAGATCTCAGAGCTGCAGTGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTTGGGCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CAA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTTGGTCCTCGAGCAGCTaGGGAGAAGGGTGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: LASSSFSVGAPHHLANRSWSSSS*GEGWFP
Trigger: GGGGAACCACCCTTCTCCCAAGCTGCTCGAGGACCA...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TGGGGCCTGAGTACAAACACCCTTGAATGCGATGATGTTAGGGTGCTTCAACTTTGGTCCTCGAGCAGCTaGGGAGAAGGGTGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: WGLSTNTLECDDVRVLQLWSSSS*GEGWFP
Trigger: GGGGAACCACCCTTCTCCCAAGCTGCTCGAGGACCA...AAGTTGAAGCACCCTAACATCATCGCATTCAAGGGTGTTTGTACTCAGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CAA 90 bp GAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTCAAGAAGACCGCTCCTaGGGCTCCACTACCCAGCCA +
Preference number: 5 (lower is better)
Translates to: ECLPKRRSVSRFTLPRLFQEDRS*GSTTQP
Trigger: TGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTTG...AAACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CAA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACATCTTCCGCCCGGAACTaGCCCAAGAAGACCGCTCCT +
Preference number: 5 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATSSARN*PKKTAP
Trigger: AGGAGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAGA...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp GCTCCGCAGGGCTGCTGCTGGGCCGAAATACCTCAGGTTGTTGGCGCAGGTTGCTGTTTCATAAGGATTTaGAATCCATCAGGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: APQGCCWAEIPQVVGAGCCFIRI*NPSGQV
Trigger: CACTTGCCCTGATGGATTCAAAATCCTTATGAAACA...GCAACCTGCGCCAACAACCTGAGGTATTTCGGCCCAGCAGCAGCCCTGCGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp TCTGCAGAGGCCTTGTTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATGAGAGGAGTTTCTCCATGGCATaGGGATGGATGATAGGACGA +
Preference number: 5 (lower is better)
Translates to: SAEALFFEVALEGCRDERSFSMA*GWMIGR
Trigger: TCGTCCTATCATCCATCCCAATGCCATGGAGAAACT...CCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAACAAGGCCTCTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGGTTTTAGCAGCACACTaGCTGATACACCTCACGGCT +
Preference number: 5 (lower is better)
Translates to: VSLPRQNAGREWDESGGGVLAAH*LIHLTA
Trigger: AGCCGTGAGGTGTATCAGCAAGTGTGCTGCTAAAAC...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443863.5
CDS-3UTR CAA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGCTTCGATATCGGCTCTaGCTGCTAGAAGTGGACATT +
Preference number: 5 (lower is better)
Translates to: VSLPRQNAGREWDESGGGLRYRL*LLEVDI
Trigger: AATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAG...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp CCTCCAGGGCAGCAAGGGGCAAGATCTCATCATGCTCCTCAGAATGCTGTGCAAGTATTGGGATTGAGCTaGGTGCAGGTAAGTGGGATG +
Preference number: 5 (lower is better)
Translates to: PPGQQGARSHHAPQNAVQVLGLS*VQVSGM
Trigger: CATCCCACTTACCTGCACCAAGCTCAATCCCAATAC...TTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TCCAAGAGAGGATTATGTGCTGGTGACTTGGAAAGGTCAGGGCTCCTCCCCACTTTATGTGCTGGTGACTaGGAAAGGTCAGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SKRGLCAGDLERSGLLPTLCAGD*ERSGLL
Trigger: GAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAA...AGTGGGGAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAATCCTCTCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp TTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTACTCATCAGGACTGTTaGAGTGGTCACTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: FFEVALEGCRDERCRGMTTHQDC*SGHWYF
Trigger: GAAATACCAGTGACCACTCAAACAGTCCTGATGAGT...AGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp CCTCCAGGGCAGCAAGGGGCAAGATCTCATCATGCTCCTCAGAATGCTGTGCAACATCTTCCTAATAGCTaGCACATGCTGGCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: PPGQQGARSHHAPQNAVQHLPNS*HMLAGV
Trigger: AACCCCAGCCAGCATGTGCAAGCTATTAGGAAGATG...TTGCACAGCATTCTGAGGAGCATGATGAGATCTTGCCCCTTGCTGCCCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS TCA 90 bp CCCACACAATCCTCCAGCCCACCGCAAAGGAGCCCAAAGGCTTGCTaGCGTCACAGATTCATGAATGGATGTAAATTGGGCTGGTTTAGG +
Preference number: 5 (lower is better)
Translates to: PTQSSSPPQRSPKAC*RHRFMNGCKLGWFR
Trigger: CCTAAACCAGCCCAATTTACATCCATTCATGAATCTGTGACGTCAGCAAGCCTTTGGGCTCCTTTGCGGTGGGCTGGAGGATTGTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS TCA 90 bp AGTCCTTCAAGAAACCCACCACTGCCACTGCCTGACCTGCTGAACTaGATCTTTATGTCTTCAGTTCCGCTTGTGCTCTCTCCGTCCACC +
Preference number: 5 (lower is better)
Translates to: SPSRNPPLPLPDLLN*IFMSSVPLVLSPST
Trigger: GGTGGACGGAGAGAGCACAAGCGGAACTGAAGACATAAAGATTCAGTTCAGCAGGTCAGGCAGTGGCAGTGGTGGGTTTCTTGAAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CAA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGTATTGGGATTGAGCTaGGTGCAGGTAAGTGGGATG +
Preference number: 5 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIVLGLS*VQVSGM
Trigger: CATCCCACTTACCTGCACCAAGCTCAATCCCAATAC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp GGCAGGAGGGGGCTGCTGGTATTGCTGCTGCAGAGAATTATGGTGATGAAGAGAAAATACCTCAGGTTGTaGGCGCAGGTTGCTATGTCC +
Preference number: 5 (lower is better)
Translates to: GRRGLLVLLLQRIMVMKRKYLRL*AQVAMS
Trigger: GGACATAGCAACCTGCGCCAACAACCTGAGGTATTT...TCTCTTCATCACCATAATTCTCTGCAGCAGCAATACCAGCAGCCCCCTCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp GGTTGCTATGTCCTGTCCGTGCATATTGAGTCTGGGATGGTGACTCTGGGACATTCTTCTGCAGAGGCCTaGTTTTTCGAGGTAGCGCTG +
Preference number: 5 (lower is better)
Translates to: GCYVLSVHIESGMVTLGHSSAEA*FFEVAL
Trigger: CAGCGCTACCTCGAAAAACAAGGCCTCTGCAGAAGA...ATGTCCCAGAGTCACCATCCCAGACTCAATATGCACGGACAGGACATAGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGATCACAATGTATCCATaGGGCTTCAGGGCAGAACAT +
Preference number: 5 (lower is better)
Translates to: VSLPRQNAGREWDESGGGITMYP*GFRAEH
Trigger: ATGTTCTGCCCTGAAGCCCAATGGATACATTGTGAT...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp GGTTCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACGAGTACAAACACCCCTaGCTGCTGCAATTTGTAATC +
Preference number: 5 (lower is better)
Translates to: GSFRITSGAIHATVPANDEYKHP*LLQFVI
Trigger: GATTACAAATTGCAGCAGCAAGGGGTGTTTGTACTC...GTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439882.1
CDS-3UTR CAA 90 bp GGAAGCTACCAACCAACACAGCGAGGTGGGAGGGTTTGTTACTCTAACTCTTGTTCCGATGGCTGGGCTTaGGTTTCCGAGGGGATTTCT +
Preference number: 5 (lower is better)
Translates to: GSYQPTQRGGRVCYSNSCSDGWA*VSEGIS
Trigger: AGAAATCCCCTCGGAAACCAAAGCCCAGCCATCGGA...ACAAGAGTTAGAGTAACAAACCCTCCCACCTCGCTGTGTTGGTTGGTAGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS TCA 90 bp GCCCACCGCAAAGGAGCCCAAAGGCTTGCTGACGTCACAGATTCATaGATGGATGTAAATTGGGCTGGTTTAGGATTCCGCACAGACTTC +
Preference number: 5 (lower is better)
Translates to: AHRKGAQRLADVTDS*MDVNWAGLGFRTDF
Trigger: GAAGTCTGTGCGGAATCCTAAACCAGCCCAATTTACATCCATTCATGAATCTGTGACGTCAGCAAGCCTTTGGGCTCCTTTGCGGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS GCA 90 bp AACTTGCCCAAGAAGACCGCTCCTTGGGCTCCACTACCCAGCCACTaGAGCTCTGAGATCTCCTCAAATGGCACTTCCCAAGTATTTTTA +
Preference number: 5 (lower is better)
Translates to: NLPKKTAPWAPLPSH*SSEISSNGTSQVFL
Trigger: TAAAAATACTTGGGAAGTGCCATTTGAGGAGATCTCAGAGCTGCAGTGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTTGGGCAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443863.5
CDS CCA 90 bp AGGGTAAGTGTGGAGAAGAGGAGCAGCTCAGGTGCTCCTGAAAGTTaGCCATCGTGCCATGAGTATAACCAAAGTCCTGAGATGACACTC +
Preference number: 5 (lower is better)
Translates to: RVSVEKRSSSGAPES*PSCHEYNQSPEMTL
Trigger: GAGTGTCATCTCAGGACTTTGGTTATACTCATGGCACGATGGCCAACTTTCAGGAGCACCTGAGCTGCTCCTCTTCTCCACACTTACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS-3UTR CAA 90 bp TTTTTCGAGGTAGCGCTGGAGGGGTGCCGAGATGAGAGGTGCCGAGGGATGACTACACTCAGAAGATTTTaGGGACAGAGTTCTGACTTA +
Preference number: 5 (lower is better)
Translates to: FFEVALEGCRDERCRGMTTLRRF*GQSSDL
Trigger: TAAGTCAGAACTCTGTCCCAAAAATCTTCTGAGTGT...AGTCATCCCTCGGCACCTCTCATCTCGGCACCCCTCCAGCGCTACCTCGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTTGTTCTCTCACTTTCTaGATGGCCACCTCTTCCGCC +
Preference number: 5 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSCSLTF*MATSSA
Trigger: GGCGGAAGAGGTGGCCATCAAGAAAGTGAGAGAACA...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp GAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTTTTGTTCTCTCACTTTCTaGATGGCCACCTCTTCCGCC +
Preference number: 5 (lower is better)
Translates to: ECLPKRRSVSRFTLPRLFCSLTF*MATSSA
Trigger: GGCGGAAGAGGTGGCCATCAAGAAAGTGAGAGAACA...AAACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CAA 90 bp TCATTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCCTTGAAGTAAGTTTCTaGTGGGGTGGCAAGTACATC +
Preference number: 5 (lower is better)
Translates to: SFRITSGAIHATVPANDILEVSF*WGGKYI
Trigger: GATGTACTTGCCACCCCACAAGAAACTTACTTCAAG...GATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR CAA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCCTTCTTTTCCACTGCTaGCTCACGCTTAATGAGCTC +
Preference number: 5 (lower is better)
Translates to: WDESGGGVDLKCQYSHEILLFHC*LTLNEL
Trigger: GAGCTCATTAAGCGTGAGCAAGCAGTGGAAAAGAAG...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TCTGTGGTGGGGATCCCTTCTGATCTCAACAAGTCTGGCCGTTTGGTCTGCATCCTTCGATATCGGCTCTaGCTGCTAGAAGTGGACATT +
Preference number: 5 (lower is better)
Translates to: SVVGIPSDLNKSGRLVCILRYRL*LLEVDI
Trigger: AATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAG...GATGCAGACCAAACGGCCAGACTTGTTGAGATCAGAAGGGATCCCCACCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGCGGCGGTGGCGTGGTTaGCTTCGATATCGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLRRWRG*LRYRLL
Trigger: CAAGAGCCGATATCGAAGCAAACCACGCCACCGCCG...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGCTGGTTTTTCAAGATaGCGGCAAAGTCACTATGGC +
Preference number: 5 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIAGFSR*RQSHYG
Trigger: GCCATAGTGACTTTGCCGCAATCTTGAAAAACCAGC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTCCGAAATACCTCAGGTaGTTGGCGCAGGTTGCTATG +
Preference number: 5 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCPKYLR*LAQVAM
Trigger: CATAGCAACCTGCGCCAACAACCTGAGGTATTTCGG...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp CTGCTGGTATTGCTGCTGCAGAGAATTATGGTGATGAAGAGAAGGGTATTGGGAGGACCAGCTTGGCCCTaGTCAGGCTCAGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: LLVLLLQRIMVMKRRVLGGPAWP*SGSELL
Trigger: GAGAAGTTCTGAGCCTGACAAGGGCCAAGCTGGTCC...TCCCAATACCCTTCTCTTCATCACCATAATTCTCTGCAGCAGCAATACCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCCTGTCGTTCTGCCATaGGGGCTAACTCAAGCTCAA +
Preference number: 5 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSPVVLP*GLTQAQ
Trigger: TTGAGCTTGAGTTAGCCCCAATGGCAGAACGACAGG...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TTCCGTATCACCTCTGGCGCCATCCATGCGACCGTGCCAGCAAATGACATCTTGAGTCCATTGAAGGTTTaGCTTTCACTGAAGGGTAAG +
Preference number: 5 (lower is better)
Translates to: FRITSGAIHATVPANDILSPLKV*LSLKGK
Trigger: CTTACCCTTCAGTGAAAGCAAAACCTTCAATGGACT...CAAGATGTCATTTGCTGGCACGGTCGCATGGATGGCGCCAGAGGTGATACGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS-3UTR CAA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAGCCCCAGGGACCAGCTaGGCCCTTGTCAGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSAPGTS*ALVRLR
Trigger: TCTGAGCCTGACAAGGGCCAAGCTGGTCCCTGGGGC...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp AAAAAGTCTGGGTTGGTGCCAGGTAAATCCCAAACCCAAGCACATCTATTATTTCGCACGGCACACTCCTaGTCAGAGAGCCCATCCGAG +
Preference number: 5 (lower is better)
Translates to: KKSGLVPGKSQTQAHLLFRTAHS*SESPSE
Trigger: CTCGGATGGGCTCTCTGACAAGGAGTGTGCCGTGCG...AAATAATAGATGTGCTTGGGTTTGGGATTTACCTGGCACCAACCCAGACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCCTTCAATTGGAATTGTaGTCCAAAAGGGCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: WDESGGGVDLKCQYSHEILQLEL*SKRAVG
Trigger: ACCCACTGCCCTTTTGGACAACAATTCCAATTGAAG...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS TCA 90 bp CAAATAGTCCTTCAAGAAACCCACCACTGCCACTGCCTGACCTGCTaGACTGAATCTTTATGTCTTCAGTTCCGCTTGTGCTCTCTCCGT +
Preference number: 5 (lower is better)
Translates to: QIVLQETHHCHCLTC*TESLCLQFRLCSLR
Trigger: ACGGAGAGAGCACAAGCGGAACTGAAGACATAAAGATTCAGTTCAGCAGGTCAGGCAGTGGCAGTGGTGGGTTTCTTGAAGGACTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000438053.5
ENST00000439882.1
CDS GCA 90 bp GTGGAGAAGAGGAGCAGCTCAGGTGCTCCTGAAAGTTGGCCATCGTaGCATGAGTATAACCAAAGTCCTGAGATGACACTCAGAAGATTT +
Preference number: 5 (lower is better)
Translates to: VEKRSSSGAPESWPS*HEYNQSPEMTLRRF
Trigger: AAATCTTCTGAGTGTCATCTCAGGACTTTGGTTATACTCATGGCACGATGGCCAACTTTCAGGAGCACCTGAGCTGCTCCTCTTCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS CCA 90 bp AAGAGAGGGCTCCAAAACACCAAGCTGAAGTCTGAACAGACAGCATaGAACTACCAGCAGCCGCCAGTTTCCTCACAGACTAAACTAAAC +
Preference number: 5 (lower is better)
Translates to: KRGLQNTKLKSEQTA*NYQQPPVSSQTKLN
Trigger: GTTTAGTTTAGTCTGTGAGGAAACTGGCGGCTGCTGGTAGTTCCATGCTGTCTGTTCAGACTTCAGCTTGGTGTTTTGGAGCCCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428617.1
CDS-3UTR CAA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTCTAGAAGTGGACATTTaGGGACTTCCGGACAAAGGG +
Preference number: 5 (lower is better)
Translates to: LASSSFSVGAPHHLANRSLEVDI*GLPDKG
Trigger: CCCTTTGTCCGGAAGTCCCAAAATGTCCACTTCTAG...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACGCACGGCACACTCCTaGTCAGAGAGCCCATCCGAG +
Preference number: 5 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSRTAHS*SESPSE
Trigger: CTCGGATGGGCTCTCTGACAAGGAGTGTGCCGTGCG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp GTCTCTCTTCCCAGACAAAATGCTGGGAGAGAGTGGGATGAGTCTGGGGGTGGGAAAATGTTCAATGTCTaGCTCTGGCTCTTCTTTAGT +
Preference number: 5 (lower is better)
Translates to: VSLPRQNAGREWDESGGGKMFNV*LWLFFS
Trigger: ACTAAAGAAGAGCCAGAGCAAGACATTGAACATTTT...CCCACCCCCAGACTCATCCCACTCTCTCCCAGCATTTTGTCTGGGAAGAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCAGGAAGCACATGCCCTaGAAGACATTGGGTGCAAGT +
Preference number: 5 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLRKHMP*KTLGAS
Trigger: ACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCT...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCTTCCTTCAATTGGAATaGTTGTCCAAAAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIFLQLE*LSKRAV
Trigger: CACTGCCCTTTTGGACAACAATTCCAATTGAAGGAA...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCTGGCTGGGGTTCCCTaGGCCTGCAGTCACTGGAGG +
Preference number: 5 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHLAGVP*ACSHWR
Trigger: CCTCCAGTGACTGCAGGCCAAGGGAACCCCAGCCAG...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCGGGTCACTAAAACACTaGCTGCTGCAATTTGTAATC +
Preference number: 5 (lower is better)
Translates to: WDESGGGVDLKCQYSHEIGSLKH*LLQFVI
Trigger: GATTACAAATTGCAGCAGCAAGTGTTTTAGTGACCC...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp GGGACGTATTTGCCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAACAAGAAGACCGCTCCTaGGGCTCCACTACCCAGCCA +
Preference number: 5 (lower is better)
Translates to: GTYLPKTRFDTICKPHYQQEDRS*GSTTQP
Trigger: TGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTTG...TTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCCTCGTAACTTCCTCAAATGCTaGATATCCGTCTCATTCTGT +
Preference number: 5 (lower is better)
Translates to: SSRQATWLQRGVVPSSPRNFLKC*ISVSFC
Trigger: ACAGAATGAGACGGATATCAAGCATTTGAGGAAGTT...ACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCCTCGTTGTTTCATAAGGATTTaGAATCCATCAGGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: SSRQATWLQRGVVPSSPRCFIRI*NPSGQV
Trigger: CACTTGCCCTGATGGATTCAAAATCCTTATGAAACA...ACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCTGTTTCATAAGGATTTaGAATCCATCAGGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: WDESGGGVDLKCQYSHEICFIRI*NPSGQV
Trigger: CACTTGCCCTGATGGATTCAAAATCCTTATGAAACA...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265026.8
ENST00000438053.5
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATAACAAGTCTGGCCGTTaGGTCTGCATCCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYNKSGR*VCIPDL
Trigger: CAAATCTGGGATGCAGACCAAACGGCCAGACTTGTT...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACGGACCAGCTTGGCCCTaGTCAGGCTCAGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYGPAWP*SGSELL
Trigger: GAGAAGTTCTGAGCCTGACAAGGGCCAAGCTGGTCC...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGTCTTCTGCAGAGGCCTaGTTTTTCGAGGTAGCGCTG +
Preference number: 5 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLSSAEA*FFEVAL
Trigger: CAGCGCTACCTCGAAAAACAAGGCCTCTGCAGAAGA...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp CCTGCCTTTCCTTTTTGGCTGATGCAATCAGTAAAACCCAGAGGAGCGGCAACAACTCATCAGGACTGTTaGAGTGGTCACTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: PAFPFWLMQSVKPRGAATTHQDC*SGHWYF
Trigger: GAAATACCAGTGACCACTCAAACAGTCCTGATGAGT...TGTTGCCGCTCCTCTGGGTTTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCCTCGTTTATTTTCCAGAGATTaGCGAAGTCTCATGTTCCTG +
Preference number: 5 (lower is better)
Translates to: SSRQATWLQRGVVPSSPRLFSRD*RSLMFL
Trigger: CAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA...ACGAGGAGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TGGGATGAGTCTGGGGGTGGGGTGGATCTGAAATGCCAGTATAGTCACGAGATCTTATTTTCCAGAGATTaGCGAAGTCTCATGTTCCTG +
Preference number: 5 (lower is better)
Translates to: WDESGGGVDLKCQYSHEILFSRD*RSLMFL
Trigger: CAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA...GATCTCGTGACTATACTGGCATTTCAGATCCACCCCACCCCCAGACTCATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp ATGAGTGTCTGCCGAAAAGAAGGTCGGTTTCGAGGTTTACTCTGCCACGTCTGTAGTCCATTGAAGGTTTaGCTTTCACTGAAGGGTAAG +
Preference number: 5 (lower is better)
Translates to: MSVCRKEGRFRGLLCHVCSPLKV*LSLKGK
Trigger: CTTACCCTTCAGTGAAAGCAAAACCTTCAATGGACT...ACAGACGTGGCAGAGTAAACCTCGAAACCGACCTTCTTTTCGGCAGACACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR CAA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGTCTTCAGTTCCGCTaGTGCTCTCTCCGTCCACCG +
Preference number: 5 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSCLQFR*CSLRPP
Trigger: CGGTGGACGGAGAGAGCACAAGCGGAACTGAAGACA...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCAAGAAGACCGCTCCTaGGGCTCCACTACCCAGCCA +
Preference number: 5 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSQEDRS*GSTTQP
Trigger: TGGCTGGGTAGTGGAGCCCAAGGAGCGGTCTTCTTG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000443863.5
CDS-3UTR CAA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTCTTCCGCCCGGAACTaGCCCAAGAAGACCGCTCCT +
Preference number: 5 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHSSARN*PKKTAP
Trigger: AGGAGCGGTCTTCTTGGGCAAGTTCCGGGCGGAAGA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000443863.5
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCGGCGGTGGCGTGGTTaGCTTCGATATCGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISRRWRG*LRYRLL
Trigger: CAAGAGCCGATATCGAAGCAAACCACGCCACCGCCG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATGAGAGGAGTTGCCTTTaGCAAGCTGCTTGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYERSCL*QAACFC
Trigger: GCAAAAACAAGCAGCTTGCAAAAGGCAACTCCTCTC...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATCCTGCTCAGCATCCCTaGTTCTTTCCACAAATGTTC +
Preference number: 5 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYPAQHP*FFPQMF
Trigger: GAACATTTGTGGAAAGAACAAGGGATGCTGAGCAGG...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TATGACTCAAGTAGACAAGCAACCTGGCTCCAGAGAGGGGTGGTTCCATCTTCTCTAGTTCAGTCCGACTaGAATAGGCTTTTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: YDSSRQATWLQRGVVPSSLVQSD*NRLLQY
Trigger: ATACTGCAAAAGCCTATTCAAGTCGGACTGAACTAG...AGAAGATGGAACCACCCCTCTCTGGAGCCAGGTTGCTTGTCTACTTGAGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp AAAATCTCCGATGGCTGGGCTTTGGTTTCCGAGGGGATTTCTTTCCCATATGTTTCAAAAACGTGGTACTaGATGCTCTCCCAGAGTGCT +
Preference number: 5 (lower is better)
Translates to: KISDGWALVSEGISFPYVSKTWY*MLSQSA
Trigger: AGCACTCTGGGAGAGCATCAAGTACCACGTTTTTGA...AACATATGGGAAAGAAATCCCCTCGGAAACCAAAGCCCAGCCATCGGAGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR CAA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCAGTCCATTGAAGGTTTaGCTTTCACTGAAGGGTAAG +
Preference number: 5 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLSPLKV*LSLKGK
Trigger: CTTACCCTTCAGTGAAAGCAAAACCTTCAATGGACT...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp ATGTTGAGAGGTTCTGAGGCTGTGTCTAGGCTCAGTAGGAAAGATACGATGCTCCACTTCCCAAGTATCTaGCTGCTGCAATTTGTAATC +
Preference number: 5 (lower is better)
Translates to: MLRGSEAVSRLSRKDTMLHFPSI*LLQFVI
Trigger: GATTACAAATTGCAGCAGCAAGATACTTGGGAAGTG...GAGCATCGTATCTTTCCTACTGAGCCTAGACACAGCCTCAGAACCTCTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TTCATTCCACTTGCAATTCCTGTGGACCAGTCTACTAGCAATCGAGGTGTGATCCTTGAAGTAAGTTTCTaGTGGGGTGGCAAGTACATC +
Preference number: 5 (lower is better)
Translates to: FIPLAIPVDQSTSNRGVILEVSF*WGGKYI
Trigger: GATGTACTTGCCACCCCACAAGAAACTTACTTCAAG...GATCACACCTCGATTGCTAGTAGACTGGTCCACAGGAATTGCAAGTGGAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CAA 90 bp AGAATTATGGTGATGAAGAGAAGGGTATTGGGATTGAGCTTGGTGCAGGTAAGTCTAGAAGTGGACATTTaGGGACTTCCGGACAAAGGG +
Preference number: 5 (lower is better)
Translates to: RIMVMKRRVLGLSLVQVSLEVDI*GLPDKG
Trigger: CCCTTTGTCCGGAAGTCCCAAAATGTCCACTTCTAG...ACTTACCTGCACCAAGCTCAATCCCAATACCCTTCTCTTCATCACCATAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438053.5
CDS-3UTR CAA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGGACCAGCTTGGCCCTaGTCAGGCTCAGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHGPAWP*SGSELL
Trigger: GAGAAGTTCTGAGCCTGACAAGGGCCAAGCTGGTCC...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTGGACCAGCTTGGCCCTaGTCAGGCTCAGAACTTCTC +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISGPAWP*SGSELL
Trigger: GAGAAGTTCTGAGCCTGACAAGGGCCAAGCTGGTCC...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTGTGAATCTAGAGAGGTaGTTTGACGGTAATCTGTCT +
Preference number: 5 (lower is better)
Translates to: LASSSFSVGAPHHLANRSVNLER*FDGNLS
Trigger: AGACAGATTACCGTCAAACAACCTCTCTAGATTCAC...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATCCTCATGTTTCTCTGTaGCCACTAAAGGTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDPHVSL*PLKVGK
Trigger: CTTGCCCACCTTTAGTGGCAACAGAGAAACATGAGG...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TGTTTTTCCCTCCTAGAGGAAGCACATGCCCTTGAAGACATTGGGTGCAAGTATTCATTCTTGTTCCCATaGCCGTTCAATACAGAGAGG +
Preference number: 5 (lower is better)
Translates to: CFSLLEEAHALEDIGCKYSFLFP*PFNTER
Trigger: CCTCTCTGTATTGAACGGCAATGGGAACAAGAATGA...ATACTTGCACCCAATGTCTTCAAGGGCATGTGCTTCCTCTAGGAGGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp ATTTTGAATCCATCAGGGCAAGTGGAAGGAACTGGAAGGTGGAGGCTGTTGCTTACACTCAGAAGATTTTaGGGACAGAGTTCTGACTTA +
Preference number: 5 (lower is better)
Translates to: ILNPSGQVEGTGRWRLLLTLRRF*GQSSDL
Trigger: TAAGTCAGAACTCTGTCCCAAAAATCTTCTGAGTGT...AAGCAACAGCCTCCACCTTCCAGTTCCTTCCACTTGCCCTGATGGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433092.5
ENST00000438053.5
CDS-3UTR CAA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATGTTCTCTCACTTTCTaGATGGCCACCTCTTCCGCC +
Preference number: 5 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSCSLTF*MATSSA
Trigger: GGCGGAAGAGGTGGCCATCAAGAAAGTGAGAGAACA...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000443863.5
CDS-3UTR CAA 90 bp TGGGGCCTGAGTACAAACACCCTTGAATGCGATGATGTTAGGGTGCTTCAACTTAACTTCCTCAAATGCTaGATATCCGTCTCATTCTGT +
Preference number: 5 (lower is better)
Translates to: WGLSTNTLECDDVRVLQLNFLKC*ISVSFC
Trigger: ACAGAATGAGACGGATATCAAGCATTTGAGGAAGTT...AAGTTGAAGCACCCTAACATCATCGCATTCAAGGGTGTTTGTACTCAGGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CAA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATCTTCTTTTCCACTGCTaGCTCACGCTTAATGAGCTC +
Preference number: 5 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDLLFHC*LTLNEL
Trigger: GAGCTCATTAAGCGTGAGCAAGCAGTGGAAAAGAAG...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATGCTGGTTTTTCAAGATaGCGGCAAAGTCACTATGGC +
Preference number: 5 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDAGFSR*RQSHYG
Trigger: GCCATAGTGACTTTGCCGCAATCTTGAAAAACCAGC...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAAGGGGGCTGCTGGTATaGCTGCTGCAGAGAATTATG +
Preference number: 5 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSRGLLV*LLQRIM
Trigger: CATAATTCTCTGCAGCAGCAATACCAGCAGCCCCCT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACAAATACCTCAGGTTGTaGGCGCAGGTTGCTATGTCC +
Preference number: 5 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYKYLRL*AQVAMS
Trigger: GGACATAGCAACCTGCGCCAACAACCTGAGGTATTT...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACCGAAATACCTCAGGTaGTTGGCGCAGGTTGCTATG +
Preference number: 5 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSPKYLR*LAQVAM
Trigger: CATAGCAACCTGCGCCAACAACCTGAGGTATTTCGG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTATGTGCTGGTGACTaGGAAAGGTCAGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSLCAGD*ERSGLL
Trigger: GAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAA...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp CTAGCATCTTCATCTTTCTCAGTAGGAGCTCCCCACCATCTTGCAAACAGGTCTAGTCTGTTCTCCTGCTaGAATCAATATGACTCAAGT +
Preference number: 5 (lower is better)
Translates to: LASSSFSVGAPHHLANRSSLFSC*NQYDSS
Trigger: ACTTGAGTCATATTGATTCAAGCAGGAGAACAGACT...AGACCTGTTTGCAAGATGGTGGGGAGCTCCTACTGAGAAAGATGAAGATGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCAAGGCAGGAGAATCGCTaGAACCTGGGAGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSRQENR*NLGDGG
Trigger: ACCTCCATCTCCCAGGTTCAAGCGATTCTCCTGCCT...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCACCTGAGGTCAGGAGTTaGAGACAAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSPEVRS*RQAWPT
Trigger: TGTTGGCCAGGCTTGTCTCAAACTCCTGACCTCAGG...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp CCTAACCACAAAAGAGAAATTCATTCGCTCCAAGTCGATAGGAGCTCAAATTACATGTCCATCCACTATTaGACATCCTGGGGGTCATCG +
Preference number: 5 (lower is better)
Translates to: PNHKREIHSLQVDRSSNYMSIHY*TSWGSS
Trigger: CGATGACCCCCAGGATGTCAAATAGTGGATGGACAT...GTAATTTGAGCTCCTATCGACTTGGAGCGAATGAATTTCTCTTTTGTGGTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCAGGGGGCTGCTGGTATaGCTGCTGCAGAGAATTATG +
Preference number: 5 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSRGLLV*LLQRIM
Trigger: CATAATTCTCTGCAGCAGCAATACCAGCAGCCCCCT...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATCCGAAATACCTCAGGTaGTTGGCGCAGGTTGCTATG +
Preference number: 5 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHPKYLR*LAQVAM
Trigger: CATAGCAACCTGCGCCAACAACCTGAGGTATTTCGG...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCCGAAATACCTCAGGTaGTTGGCGCAGGTTGCTATG +
Preference number: 5 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSPKYLR*LAQVAM
Trigger: CATAGCAACCTGCGCCAACAACCTGAGGTATTTCGG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTTTATGTGCTGGTGACTaGGAAAGGTCAGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISLCAGD*ERSGLL
Trigger: GAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAA...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTATGTGCTGGTGACTaGGAAAGGTCAGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHLCAGD*ERSGLL
Trigger: GAGGAGCCCTGACCTTTCCAAGTCACCAGCACATAA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTTCTTCTGCAGAGGCCTaGTTTTTCGAGGTAGCGCTG +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISSSAEA*FFEVAL
Trigger: CAGCGCTACCTCGAAAAACAAGGCCTCTGCAGAAGA...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp GATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTCTTCTGCAGAGGCCTaGTTTTTCGAGGTAGCGCTG +
Preference number: 5 (lower is better)
Translates to: DIIFQRFAKSHVPVIAAHSSAEA*FFEVAL
Trigger: CAGCGCTACCTCGAAAAACAAGGCCTCTGCAGAAGA...ATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp ATCGGCCCACCCAGGAGCTTTCATGATCAAGTCAAAATCACAATGTATCCATTGTCCTGCCTTTCCTTTTaGGCTGATGCAATCAGTAAA +
Preference number: 5 (lower is better)
Translates to: IGPPRSFHDQVKITMYPLSCLSF*ADAISK
Trigger: TTTACTGATTGCATCAGCCAAAAAGGAAAGGCAGGA...CAATGGATACATTGTGATTTTGACTTGATCATGAAAGCTCCTGGGTGGGCCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS GCA 90 bp GCATCTGTGTGGGTCACTAAAACATTGAATGCGATGATGTTAGGGTaGTTCAACTTCCTCAAATGCTTGATATCCGTCTCATTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: ASVWVTKTLNAMMLG*FNFLKCLISVSFCS
Trigger: AGAACAGAATGAGACGGATATCAAGCATTTGAGGAAGTTGAAGCACCCTAACATCATCGCATTCAATGTTTTAGTGACCCACACAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420577.1
CDS-3UTR CAA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATATGAATGGATGTAAATaGGGCTGGTTTAGGATTCCG +
Preference number: 5 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDMNGCK*GWFRIP
Trigger: CGGAATCCTAAACCAGCCCAATTTACATCCATTCAT...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTAAGGAGCCCAAAGGCTaGCTGACGTCACAGATTCAT +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISKEPKG*LTSQIH
Trigger: ATGAATCTGTGACGTCAGCAAGCCTTTGGGCTCCTT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp GAGTTCTCTATCTGTTTAGTAGCACCTGGTAGGAAGTTTCCCAACTTACCTGAGTGTTTCATAAGGATTTaGAATCCATCAGGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: EFSICLVAPGRKFPNLPECFIRI*NPSGQV
Trigger: CACTTGCCCTGATGGATTCAAAATCCTTATGAAACA...CTCAGGTAAGTTGGGAAACTTCCTACCAGGTGCTACTAAACAGATAGAGAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CAA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCACTTCTTTTCCACTGCTaGCTCACGCTTAATGAGCTC +
Preference number: 5 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSLLFHC*LTLNEL
Trigger: GAGCTCATTAAGCGTGAGCAAGCAGTGGAAAAGAAG...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAAGTTTCTCCATGGCATaGGGATGGATGATAGGACGA +
Preference number: 5 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSSFSMA*GWMIGR
Trigger: TCGTCCTATCATCCATCCCAATGCCATGGAGAAACT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTAACAAGTCTGGCCGTTaGGTCTGCATCCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISNKSGR*VCIPDL
Trigger: CAAATCTGGGATGCAGACCAAACGGCCAGACTTGTT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCTAGAAGTGGACATTTaGGGACTTCCGGACAAAGGG +
Preference number: 5 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSLEVDI*GLPDKG
Trigger: CCCTTTGTCCGGAAGTCCCAAAATGTCCACTTCTAG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGTATTGGGATTGAGCTaGGTGCAGGTAAGTGGGATG +
Preference number: 5 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSVLGLS*VQVSGM
Trigger: CATCCCACTTACCTGCACCAAGCTCAATCCCAATAC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTGTATTGGGATTGAGCTaGGTGCAGGTAAGTGGGATG +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISVLGLS*VQVSGM
Trigger: CATCCCACTTACCTGCACCAAGCTCAATCCCAATAC...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTAAATACCTCAGGTTGTaGGCGCAGGTTGCTATGTCC +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISKYLRL*AQVAMS
Trigger: GGACATAGCAACCTGCGCCAACAACCTGAGGTATTT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATTGGTCTGTTCACAAGTaGCCTGGAATTGCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDWSVHK*PGIAFL
Trigger: AAGAAAAGCAATTCCAGGCAACTTGTGAACAGACCA...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TTTATGTCATGCCCTACATGTATATACGGTAGTCCTCCCTTATTTCTGGGGGATCTATGTTGTCAATTCTaGAAACGAATCCATGAGCCC +
Preference number: 5 (lower is better)
Translates to: FMSCPTCIYGSPPLFLGDLCCQF*KRIHEP
Trigger: GGGCTCATGGATTCGTTTCAAGAATTGACAACATAG...ATCCCCCAGAAATAAGGGAGGACTACCGTATATACATGTAGGGCATGACATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TATGGAGGTGCAAATAATTCATTCCACTTGCAATTCCTGTGGACCAGTCTACTAAGTCCATTGAAGGTTTaGCTTTCACTGAAGGGTAAG +
Preference number: 5 (lower is better)
Translates to: YGGANNSFHLQFLWTSLLSPLKV*LSLKGK
Trigger: CTTACCCTTCAGTGAAAGCAAAACCTTCAATGGACT...TAGTAGACTGGTCCACAGGAATTGCAAGTGGAATGAATTATTTGCACCTCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433092.5
CDS-3UTR CAA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCAGTTTCTCCATGGCATaGGGATGGATGATAGGACGA +
Preference number: 5 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSSFSMA*GWMIGR
Trigger: TCGTCCTATCATCCATCCCAATGCCATGGAGAAACT...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCTTCGATATCGGCTCTaGCTGCTAGAAGTGGACATT +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISLRYRL*LLEVDI
Trigger: AATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCTTCGATATCGGCTCTaGCTGCTAGAAGTGGACATT +
Preference number: 5 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSLRYRL*LLEVDI
Trigger: AATGTCCACTTCTAGCAGCAAGAGCCGATATCGAAG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCGCTGGTTTTTCAAGATaGCGGCAAAGTCACTATGGC +
Preference number: 5 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSAGFSR*RQSHYG
Trigger: GCCATAGTGACTTTGCCGCAATCTTGAAAAACCAGC...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTTAGGCACAGCACTCTaGCCCTTTGGGGCTATTATT +
Preference number: 5 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSLGTAL*PFGAII
Trigger: AATAATAGCCCCAAAGGGCAAGAGTGCTGTGCCTAA...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TCTTGTTTGATAACTGCTTATCAGCAACTTCTCAAAGGTCGACTTAAATGTGTTGTTTTAGCAGCACACTaGCTGATACACCTCACGGCT +
Preference number: 5 (lower is better)
Translates to: SCLITAYQQLLKGRLKCVVLAAH*LIHLTA
Trigger: AGCCGTGAGGTGTATCAGCAAGTGTGCTGCTAAAAC...AACACATTTAAGTCGACCTTTGAGAAGTTGCTGATAAGCAGTTATCAAACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR CAA 90 bp AAAGGCACTAAATTCATACTGACCGTACAAGTCAAAGTCTCGAAAAGAATGTCACTTGAAGTAAGTTTCTaGTGGGGTGGCAAGTACATC +
Preference number: 5 (lower is better)
Translates to: KGTKFILTVQVKVSKRMSLEVSF*WGGKYI
Trigger: GATGTACTTGCCACCCCACAAGAAACTTACTTCAAG...TGACATTCTTTTCGAGACTTTGACTTGTACGGTCAGTATGAATTTAGTGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCTTGAAGTAAGTTTCTaGTGGGGTGGCAAGTACATC +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISLEVSF*WGGKYI
Trigger: GATGTACTTGCCACCCCACAAGAAACTTACTTCAAG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCCTTGAAGTAAGTTTCTaGTGGGGTGGCAAGTACATC +
Preference number: 5 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSLEVSF*WGGKYI
Trigger: GATGTACTTGCCACCCCACAAGAAACTTACTTCAAG...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTTGGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCACTCATCAGGACTGTTaGAGTGGTCACTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: FGYYFPEICEVSCSCYCSTHQDC*SGHWYF
Trigger: GAAATACCAGTGACCACTCAAACAGTCCTGATGAGT...GCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTACTCATCAGGACTGTTaGAGTGGTCACTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISTHQDC*SGHWYF
Trigger: GAAATACCAGTGACCACTCAAACAGTCCTGATGAGT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp GGATATTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCAAACTTCCCTGAGCTCTaGATTCAACACTCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: GYYFPEICEVSCSCYCSSNFPEL*IQHSSD
Trigger: ATCTGAAGAGTGTTGAATCAAGAGCTCAGGGAAGTT...TGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TCTTGTTTGATAACTGCTTATCAGCAACTTCTCAAAGGTCGACTTAAATGTGTTACATTTACAGTGGCCTaGGAAGCTACCAACCAACAC +
Preference number: 5 (lower is better)
Translates to: SCLITAYQQLLKGRLKCVTFTVA*EATNQH
Trigger: GTGTTGGTTGGTAGCTTCCAAGGCCACTGTAAATGT...AACACATTTAAGTCGACCTTTGAGAAGTTGCTGATAAGCAGTTATCAAACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455188.5
CDS-3UTR CAA 90 bp GGGACGTATTTGCCAAAAACAAGATTTGACACTATCTGTAAACCTCACTACCAAACACTCAGAAGATTTTaGGGACAGAGTTCTGACTTA +
Preference number: 5 (lower is better)
Translates to: GTYLPKTRFDTICKPHYQTLRRF*GQSSDL
Trigger: TAAGTCAGAACTCTGTCCCAAAAATCTTCTGAGTGT...TTGGTAGTGAGGTTTACAGATAGTGTCAAATCTTGTTTTTGGCAAATACGTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTCTGGCAGGAAGGAGATaGCAAACTATGTTGTCAATT +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISLAGRR*QTMLSI
Trigger: AATTGACAACATAGTTTGCAATCTCCTTCCTGCCAG...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTAACTTCCTCAAATGCTaGATATCCGTCTCATTCTGT +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISNFLKC*ISVSFC
Trigger: ACAGAATGAGACGGATATCAAGCATTTGAGGAAGTT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000443863.5
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTTGTTTCATAAGGATTTaGAATCCATCAGGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISCFIRI*NPSGQV
Trigger: CACTTGCCCTGATGGATTCAAAATCCTTATGAAACA...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTTTATTTTCCAGAGATTaGCGAAGTCTCATGTTCCTG +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISLFSRD*RSLMFL
Trigger: CAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265026.8
ENST00000443863.5
ENST00000446828.5
CDS-3UTR CAA 90 bp TTATTTTCCAGAGATTTGCGAAGTCTCATGTTCCTGTTATTGCAGCTCATTTCTACAAGGAAATGGCACTaGAGTATGAAAGATCAACAC +
Preference number: 5 (lower is better)
Translates to: LFSRDLRSLMFLLLQLISTRKWH*SMKDQH
Trigger: GTGTTGATCTTTCATACTCAAGTGCCATTTCCTTGT...AGAAATGAGCTGCAATAACAGGAACATGAGACTTCGCAAATCTCTGGAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS-3UTR CAA 90 bp AACATAGCACACTCTACTGCAGAGCAGGGCAGGAATTCTATGGATTATAAATATGAAAAGAATGTCACATaGTTTTGGTACATGAGTCTC +
Preference number: 5 (lower is better)
Translates to: NIAHSTAEQGRNSMDYKYEKNVT*FWYMSL
Trigger: GAGACTCATGTACCAAAACAATGTGACATTCTTTTC...ATATTTATAATCCATAGAATTCCTGCCCTGCTCTGCAGTAGAGTGTGCTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265026.8
CDS CCA 72 bp GGCTCCCAGCGCATCCCAGACGCTCCGCCCCACCCATaGCGTCACCCTCCACAACCAGGTACCGCCTCCCGT +
Preference number: 6 (lower is better)
Translates to: GSQRIPDAPPHP*RHPPQPGTASR
Trigger: ACGGGAGGCGGTACCTGGTTGTGGAGGGTGACGCCATGGGTGGGGCGGAGCGTCTGGGATGCGCTGGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448876.5
CDS TCA 72 bp CTTGTGCTCTCTCCGTCCACCGTGTTGCTGTTCCCCTaGGACACCGCCGTCTCTGATTCATCGTGTTCCCTT +
Preference number: 6 (lower is better)
Translates to: LVLSPSTVLLFP*DTAVSDSSCSL
Trigger: AAGGGAACACGATGAATCAGAGACGGCGGTGTCTCAGGGGAACAGCAACACGGTGGACGGAGAGAGCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS GCA 72 bp CTTACGCTCGTCAACACTGTTGTGGTGACGGGGCTGTaGACGCTCTCGATTAGCTCTGTTCGTACCATCCCC +
Preference number: 6 (lower is better)
Translates to: LTLVNTVVVTGL*TLSISSVRTIP
Trigger: GGGGATGGTACGAACAGAGCTAATCGAGAGCGTGCACAGCCCCGTCACCACAACAGTGTTGACGAGCGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS GCA 72 bp CTTCAGTTCCGCTTGTGCTCTCTCCGTCCACCGTGTTaGTGTTCCCCTGAGACACCGCCGTCTCTGATTCAT +
Preference number: 6 (lower is better)
Translates to: LQFRLCSLRPPC*CSPETPPSLIH
Trigger: ATGAATCAGAGACGGCGGTGTCTCAGGGGAACAGCAACACGGTGGACGGAGAGAGCACAAGCGGAACTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
CDS CCA 72 bp TCGATTAGCTCTGTTCGTACCATCCCCTTTTCCTGCTaGTCCTCGAGCAGCTTGGGAGAAGGGTGGTTCCCC +
Preference number: 6 (lower is better)
Translates to: SISSVRTIPFSC*SSSSLGEGWFP
Trigger: GGGGAACCACCCTTCTCCCAAGCTGCTCGAGGACCAGCAGGAAAAGGGGATGGTACGAACAGAGCTAATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS GCA 72 bp CTCTCGATTAGCTCTGTTCGTACCATCCCCTTTTCCTaGTGGTCCTCGAGCAGCTTGGGAGAAGGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: LSISSVRTIPFS*WSSSSLGEGWF
Trigger: GAACCACCCTTCTCCCAAGCTGCTCGAGGACCAGCAGGAAAAGGGGATGGTACGAACAGAGCTAATCGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS TCA 72 bp TGGAATCCTCACTTACGCTCGTCAACACTGTTGTGGTaGCGGGGCTGTGCACGCTCTCGATTAGCTCTGTTC +
Preference number: 6 (lower is better)
Translates to: WNPHLRSSTLLW*RGCARSRLALF
Trigger: GAACAGAGCTAATCGAGAGCGTGCACAGCCCCGTCACCACAACAGTGTTGACGAGCGTAAGTGAGGATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS CCA 72 bp TTTTCCTGCTGGTCCTCGAGCAGCTTGGGAGAAGGGTaGTTCCCCATAGCTGTGAGCTCATCTTGTAGTCCA +
Preference number: 6 (lower is better)
Translates to: FSCWSSSSLGEG*FPIAVSSSCSP
Trigger: TGGACTACAAGATGAGCTCACAGCTATGGGGAACCACCCTTCTCCCAAGCTGCTCGAGGACCAGCAGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS CCA 72 bp GTGGAGAAGAGGAGCAGCTCAGGTGCTCCTGAAAGTTaGCCATCGTGCCATGAGTATAACCAAAGTCCTGAG +
Preference number: 6 (lower is better)
Translates to: VEKRSSSGAPES*PSCHEYNQSPE
Trigger: CTCAGGACTTTGGTTATACTCATGGCACGATGGCCAACTTTCAGGAGCACCTGAGCTGCTCCTCTTCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS GCA 72 bp AGGAGCAGCTCAGGTGCTCCTGAAAGTTGGCCATCGTaGCATGAGTATAACCAAAGTCCTGAGATGACACTC +
Preference number: 6 (lower is better)
Translates to: RSSSGAPESWPS*HEYNQSPEMTL
Trigger: GAGTGTCATCTCAGGACTTTGGTTATACTCATGGCACGATGGCCAACTTTCAGGAGCACCTGAGCTGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS CCA 72 bp CCCTTAGCTGAAGAACGCTGTTCTCAAACTGGTCCCTaGAATCCTCACTTACGCTCGTCAACACTGTTGTGG +
Preference number: 6 (lower is better)
Translates to: PLAEERCSQTGP*NPHLRSSTLLW
Trigger: CCACAACAGTGTTGACGAGCGTAAGTGAGGATTCCAGGGACCAGTTTGAGAACAGCGTTCTTCAGCTAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS CCA 72 bp CTCCAAAACACCAAGCTGAAGTCTGAACAGACAGCATaGAACTACCAGCAGCCGCCAGTTTCCTCACAGACT +
Preference number: 6 (lower is better)
Translates to: LQNTKLKSEQTA*NYQQPPVSSQT
Trigger: AGTCTGTGAGGAAACTGGCGGCTGCTGGTAGTTCCATGCTGTCTGTTCAGACTTCAGCTTGGTGTTTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428617.1
ENST00000433092.5
CDS TCA 72 bp AGAAACCCACCACTGCCACTGCCTGACCTGCTGAACTaGATCTTTATGTCTTCAGTTCCGCTTGTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: RNPPLPLPDLLN*IFMSSVPLVLS
Trigger: AGAGAGCACAAGCGGAACTGAAGACATAAAGATTCAGTTCAGCAGGTCAGGCAGTGGCAGTGGTGGGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000438053.5
ENST00000439882.1
CDS CAA 90 bp TGGTTCCCCATAGCTGTGAGCTCATCTTGTAGTCCATTGAAGGTTTaGCTTTCACTGAAGGGTAAGTGTGGAGAAGAGGAGCAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: WFPIAVSSSCSPLKV*LSLKGKCGEEEQLR
Trigger: CCTGAGCTGCTCCTCTTCTCCACACTTACCCTTCAGTGAAAGCAAAACCTTCAATGGACTACAAGATGAGCTCACAGCTATGGGGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS CAA 90 bp GGAGAAGGGTGGTTCCCCATAGCTGTGAGCTCATCTTGTAGTCCATaGAAGGTTTTGCTTTCACTGAAGGGTAAGTGTGGAGAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: GEGWFPIAVSSSCSP*KVLLSLKGKCGEEE
Trigger: CTCCTCTTCTCCACACTTACCCTTCAGTGAAAGCAAAACCTTCAATGGACTACAAGATGAGCTCACAGCTATGGGGAACCACCCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS CCA 72 bp TCCATGGGCACAGTATTCCATGATAATACAATAACATaGGGCCTGAGTACAAACACCCCTCTCCCAGAGTGC +
Preference number: 6 (lower is better)
Translates to: SMGTVFHDNTIT*GLSTNTPLPEC
Trigger: GCACTCTGGGAGAGGGGTGTTTGTACTCAGGCCCCATGTTATTGTATTATCATGGAATACTGTGCCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446828.5
CDS CAA 90 bp TGCCATGAGTATAACCAAAGTCCTGAGATGACACTCAGAAGATTTTaGGGACAGAGTTCTGACTTAAGAGAGGGCTCCAAAACCTCTCCC +
Preference number: 6 (lower is better)
Translates to: CHEYNQSPEMTLRRF*GQSSDLREGSKTSP
Trigger: GGGAGAGGTTTTGGAGCCCTCTCTTAAGTCAGAACTCTGTCCCAAAAATCTTCTGAGTGTCATCTCAGGACTTTGGTTATACTCATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424227.5
ENST00000447637.1
CDS CCA 72 bp TCCATGGGCACAGTATTCCATGATAATACAATAACATaGGGCCTGAGTACAAACACCCCTTGCTGCTGCAAT +
Preference number: 6 (lower is better)
Translates to: SMGTVFHDNTIT*GLSTNTPCCCN
Trigger: ATTGCAGCAGCAAGGGGTGTTTGTACTCAGGCCCCATGTTATTGTATTATCATGGAATACTGTGCCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439882.1
CDS CAA 90 bp TGCCATGAGTATAACCAAAGTCCTGAGATGACACTCAGAAGATTTTaGGGACAGAGTTCTGACTTAAGAGAGGGCTCCAAAACACCAAGC +
Preference number: 6 (lower is better)
Translates to: CHEYNQSPEMTLRRF*GQSSDLREGSKTPS
Trigger: GCTTGGTGTTTTGGAGCCCTCTCTTAAGTCAGAACTCTGTCCCAAAAATCTTCTGAGTGTCATCTCAGGACTTTGGTTATACTCATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428617.1
ENST00000433092.5
CDS CAA 72 bp ATAGCTGTGAGCTCATCTTGTAGTCCATTGAAGGTTTaGCTTTCACTGAAGGGTAAGTGTGGAGAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: IAVSSSCSPLKV*LSLKGKCGEEE
Trigger: CTCCTCTTCTCCACACTTACCCTTCAGTGAAAGCAAAACCTTCAATGGACTACAAGATGAGCTCACAGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1
CDS CAA 90 bp TGCCATGAGTATAACCAAAGTCCTGAGATGACACTCAGAAGATTTTaGGGACAGAGTTCTGACTTAAGAGAGGGCTCCAAAACAACAACG +
Preference number: 6 (lower is better)
Translates to: CHEYNQSPEMTLRRF*GQSSDLREGSKTTT
Trigger: CGTTGTTGTTTTGGAGCCCTCTCTTAAGTCAGAACTCTGTCCCAAAAATCTTCTGAGTGTCATCTCAGGACTTTGGTTATACTCATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265026.8
ENST00000438053.5
CDS CAA 72 bp TATAACCAAAGTCCTGAGATGACACTCAGAAGATTTTaGGGACAGAGTTCTGACTTAAGAGAGGGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: YNQSPEMTLRRF*GQSSDLREGSK
Trigger: TTTGGAGCCCTCTCTTAAGTCAGAACTCTGTCCCAAAAATCTTCTGAGTGTCATCTCAGGACTTTGGTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265026.8
ENST00000424227.5
ENST00000428617.1
ENST00000433092.5
ENST00000438053.5
ENST00000439882.1
ENST00000447637.1