RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP3K12 (Homo sapiens)

Ensembl gene IDs: ENSG00000139625

Ensembl transcript IDs: ENST00000267079.6, ENST00000547020.1, ENST00000547035.5, ENST00000547151.1, ENST00000547488.6, ENST00000547803.1, ENST00000548565.1, ENST00000548690.1, ENST00000551511.5, ENST00000551895.1, ENST00000552365.1

Found 662 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TACGAAGCCCAGGCAGGTCCCCACAGCTCCCCTTGGCGCTGGCCTTaGGGTGACGGGTCTTGCCACGGCGACTCCGTCCTGGTGAGGGGG +
Preference number: 1 (lower is better)
Translates to: YEAQAGPHSSPWRWP*GDGSCHGDSVLVRG
Trigger: CCCCCTCACCAGGACGGAGTCGCCGTGGCAAGACCCGTCACCGCAAGGCCAGCGCCAAGGGGAGCTGTGGGGACCTGCCTGGGCTTCGTA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CCA 90 bp CAGCTGTACGAAGCCCAGGCAGGTCCCCACAGCTCCCCTTGGCGCTaGCCTTGCGGTGACGGGTCTTGCCACGGCGACTCCGTCCTGGTG +
Preference number: 1 (lower is better)
Translates to: QLYEAQAGPHSSPWR*PCGDGSCHGDSVLV
Trigger: CACCAGGACGGAGTCGCCGTGGCAAGACCCGTCACCGCAAGGCCAGCGCCAAGGGGAGCTGTGGGGACCTGCCTGGGCTTCGTACAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR GCA 90 bp GATGCCACGTTTCTGACTTCGGGTGACGGCAGCCCTGTACAGCAGTaGAGCTGGGGTCAAGTGCTGGGACCCAGCCCGGCTTCCTCCCCG +
Preference number: 1 (lower is better)
Translates to: DATFLTSGDGSPVQQ*SWGQVLGPSPASSP
Trigger: CGGGGAGGAAGCCGGGCTGGGTCCCAGCACTTGACCCCAGCTGCACTGCTGTACAGGGCTGCCGTCACCCGAAGTCAGAAACGTGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR GCA 90 bp CTGGGGGCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTaGTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGCCCCGCTCTC +
Preference number: 1 (lower is better)
Translates to: LGAARHQRCWSCPIQ*CHSLSPQNWEGPAL
Trigger: GAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR TCA 90 bp GGCATCAACGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGTCTaGGTCCTCAGAATTGGGAGGGCCCCGCTCTCTGAGAAGTTCCTG +
Preference number: 1 (lower is better)
Translates to: GINAVGVVQFSAVTV*VLRIGRAPLSEKFL
Trigger: CAGGAACTTCTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CCA 90 bp CTTCAGCCTGAGCCATCACATGCTATCAGTCTCCTAACCTCCCCCTaGGCCTTAAGACAGGGCTTGGGCAGAGAAGATAAATGGTGGGAC +
Preference number: 1 (lower is better)
Translates to: LQPEPSHAISLLTSP*ALRQGLGREDKWWD
Trigger: GTCCCACCATTTATCTTCTCTGCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGATGGCTCAGGCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR CCA 90 bp TTCATTTCCACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTaGTCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGAC +
Preference number: 1 (lower is better)
Translates to: FISTAASVPRVYQVN*SGDQSPSSLTYGWD
Trigger: GTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGTGGAAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR GCA 90 bp AAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTaGAACATGAGGGCATTAAGTTCCATATACAGGTTGTTGGCTCTC +
Preference number: 1 (lower is better)
Translates to: KACSRLSSSLSLSSS*NMRALSSIYRLLAL
Trigger: GAGAGCCAACAACCTGTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CCA 90 bp GTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTaGGACAGCCCCATCTTTCTGTTGATTATGTGGCGCATATATATA +
Preference number: 1 (lower is better)
Translates to: VNWSGDQSPSSLTYG*DSPIFLLIMWRIYI
Trigger: TATATATATGCGCCACATAATCAACAGAAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGACCAATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR TCA 90 bp CTCCAGGTTCATGGGGTGGCACAGCTGTACGAAGCCCAGGCAGGTCCCCACAGCGCGCTGGCCTTGCGGTaGCGGGTCTTGCCACGGCGA +
Preference number: 2 (lower is better)
Translates to: LQVHGVAQLYEAQAGPHSALALR*RVLPRR
Trigger: TCGCCGTGGCAAGACCCGTCACCGCAAGGCCAGCGC...GCTGTGGGGACCTGCCTGGGCTTCGTACAGCTGTGCCACCCCATGAACCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR GCA 90 bp AGCCCCACACCTTCACCAGGCCCTACTGGAGGAGGTGGTTCCCCTTTGGCTCCCCCTTGGCGCTGGCCTTaGGGTGACGGGTCTTGCCAC +
Preference number: 2 (lower is better)
Translates to: SPTPSPGPTGGGGSPLAPPWRWP*GDGSCH
Trigger: GTGGCAAGACCCGTCACCGCAAGGCCAGCGCCAAGG...GGGAGCCAAAGGGGAACCACCTCCTCCAGTAGGGCCTGGTGAAGGTGTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR TCA 90 bp TTGGGAGGGCCCCGCTCTCTGAGAAGTTCCTGGTGTGGAATGGGCAGGGAGCTGTGTCCAGGGCGTGTCTaGGCTCCTCCCTCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: LGGPRSLRSSWCGMGRELCPGRV*APPSSS
Trigger: TGAGGAGGAGGGAGGAGCTCAGACACGCCCTGGACA...CAGCTCCCTGCCCATTCCACACCAGGAACTTCTCAGAGAGCGGGGCCCTCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR TCA 90 bp CCAGCCCGGCTTCCTCCCCGGCCTGAGGTCCCTTCCCTTCCAGTTCCCAGAAGCCAGGTCTGGGGACGATaGAGACATTTTGCGGAGCAG +
Preference number: 2 (lower is better)
Translates to: PARLPPRPEVPSLPVPRSQVWGR*RHFAEQ
Trigger: CTGCTCCGCAAAATGTCTTCATCGTCCCCAGACCTG...GCTTCTGGGAACTGGAAGGGAAGGGACCTCAGGCCGGGGAGGAAGCCGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR GCA 90 bp GGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTTGCGGTGACGGGTCTTaGCACGGCGACTCCGTCCTG +
Preference number: 2 (lower is better)
Translates to: GRSSVLVLPTSGVPLGEGCGDGS*HGDSVL
Trigger: CAGGACGGAGTCGCCGTGGCAAGACCCGTCACCGCA...ACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR TCA 90 bp GCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGTCTGCCGGGCCGGAGGTGGTaGGCCAGGATCCCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: AARHQRCWSCPIQCCHSLPGRRW*ARIPSS
Trigger: GGAGCTGGGGATCCTGGCTCACCACCTCCGGCCCGG...CAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR TCA 90 bp CGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTTCAGGTGGAGCCAGGGGCTaGGCCCTCACTTGGTGGGGT +
Preference number: 2 (lower is better)
Translates to: RSSVLVLPTSGVPLGEGSGGARG*ALTWWG
Trigger: ACCCCACCAAGTGAGGGCTCAGCCCCTGGCTCCACC...TGAACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR GCA 90 bp GGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTAGCCCTGTACAGCAGTaGAGCTGGGGTCAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: GRSSVLVLPTSGVPLGEGSPVQQ*SWGQVL
Trigger: CAGCACTTGACCCCAGCTGCACTGCTGTACAGGGCT...ACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CCA 90 bp TCAGTGCTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGCCCCGCTCTCTGAGACAGGTGAATCTGGGCTaGTGGAGCCAGGGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: SVLSQSESSELGGPRSLRQVNLG*WSQGLS
Trigger: GCTCAGCCCCTGGCTCCACCAGCCCAGATTCACCTG...TCTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CCA 90 bp GGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCGTACAGCAGTGCAGCTaGGGTCAAGTGCTGGGACCC +
Preference number: 2 (lower is better)
Translates to: GAHVIRPLIWPLISVGAAVQQCS*GQVLGP
Trigger: GGGTCCCAGCACTTGACCCCAGCTGCACTGCTGTAC...GGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR GCA 90 bp GCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGTCTGGCAGCTGGGGTCAAGTaGTGGGACCCAGCCCGGCTT +
Preference number: 2 (lower is better)
Translates to: AARHQRCWSCPIQCCHSLAAGVK*WDPARL
Trigger: AAGCCGGGCTGGGTCCCAGCACTTGACCCCAGCTGC...CAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR GCA 90 bp TTGGGAGGGCCCCGCTCTCTGAGAAGTTCCTGGTGTGGAATGGGCAGGGAGCTGCATCAGTGTTGGTGCTaGCAACTTCAGGTGTGCCAC +
Preference number: 2 (lower is better)
Translates to: LGGPRSLRSSWCGMGRELHQCWC*QLQVCH
Trigger: GTGGCACACCTGAAGTTGGCAGCACCAACACTGATG...CAGCTCCCTGCCCATTCCACACCAGGAACTTCTCAGAGAGCGGGGCCCTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CCA 90 bp TGGGGGCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGTGAATCTGGGCTGGTaGAGCCAGGGGCTGAGCCCT +
Preference number: 2 (lower is better)
Translates to: WGPQGINAVGVVQFSAVTVNLGW*SQGLSP
Trigger: AGGGCTCAGCCCCTGGCTCCACCAGCCCAGATTCAC...TGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR GCA 90 bp TCAGTGCTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGCCCCGCTCTCTGAGATCCATTGTGTTTCCATaGAGGAGGCCCCGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: SVLSQSESSELGGPRSLRSIVFP*RRPREG
Trigger: CCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGA...TCTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CCA 90 bp GTGCTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGCCCCGCTCTCTGAGAAGTTCCAGGTTCATGGGGTaGCACAGCTGTACGAAGCCC +
Preference number: 2 (lower is better)
Translates to: VLSQSESSELGGPRSLRSSRFMG*HSCTKP
Trigger: GGGCTTCGTACAGCTGTGCCACCCCATGAACCTGGA...ACTTCTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CAA 90 bp TGGGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTaGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTTCACTA +
Preference number: 2 (lower is better)
Translates to: WEHMSSDRSSGRSSV*VLPTSGVPLGEGSL
Trigger: TAGTGAACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CAA 90 bp GGAGGGAGGGAAGCTGGGGGCCGCAAGGCATCAACGCTGTTGGAGTaGTCCAATTCAGTGCTGTCACAGTCTGAGTCCTCAGAATTGGGA +
Preference number: 2 (lower is better)
Translates to: GGREAGGRKASTLLE*SNSVLSQSESSELG
Trigger: TCCCAATTCTGAGGACTCAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCAGCTTCCCTCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR GCA 90 bp AGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTCCGCTCTAAAGCTTaGTCTCGCCTGAGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: STCHQTAHLAAHQCWCCQLRSKA*SRLSSS
Trigger: GGAGCTGCTCAGGCGAGAGCAAGCTTTAGAGCGGAG...TTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR TCA 90 bp ATCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGACCTTTTGCTATGGGGTaGCAGCTTCTGTGGCACATT +
Preference number: 2 (lower is better)
Translates to: IWPLISVGAANFRCATGGPFAMG*QLLWHI
Trigger: AATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGG...TCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR TCA 90 bp GGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCTTCCTCCTCTTCCGATaGGATGCCACGTTTCTGACT +
Preference number: 2 (lower is better)
Translates to: GAHVIRPLIWPLISVGAAFLLFR*DATFLT
Trigger: AGTCAGAAACGTGGCATCTCATCGGAAGAGGAGGAA...GGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCTCCTAACCTCCCCCTaGGCCTTAAGACAGGGCTTG +
Preference number: 2 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPELLTSP*ALRQGL
Trigger: CAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAG...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR CCA 90 bp AGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCAATCTGGCCTTTTGCTATaGGGTGACAGCTTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: STCHQTAHLAAHQCWCCQSGLLL*GDSFCG
Trigger: GCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGA...TTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR GCA 90 bp TCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAACGATGAAGACATTTTaGGGAGCAGGAGGTCATGAT +
Preference number: 2 (lower is better)
Translates to: SGRSSVLVLPTSGVPLGETMKTF*GAGGHD
Trigger: ATCATGACCTCCTGCTCCGCAAAATGTCTTCATCGT...TTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCGTTTATCAGGTGAATTaGTCAGGGGATCAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: SHAISLLTSPWALRQGLGVYQVN*SGDQSP
Trigger: GGGAGACTGATCCCCTGACCAATTCACCTGATAAAC...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR GCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAACAGCTCTACGGCTGTaGCTCATTCATTTCCACAGC +
Preference number: 2 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPTALRL*LIHFHS
Trigger: GCTGTGGAAATGAATGAGGCACAGCCGTAGAGCTGT...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR GCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCCTCCCTCCTCCCAAGTaGAAAATGTGTAAACAGAGT +
Preference number: 2 (lower is better)
Translates to: SHAISLLTSPWALRQGLGLPPPK*KMCKQS
Trigger: ACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAG...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR GCA 90 bp GGGTCCAGTGGGATTTCTGAGCCCTGGGAGCACATGTCATCAGACCGCTCATCTTCCTTGAGTTCCAGCTaGAACATGAGGGCATTAAGT +
Preference number: 2 (lower is better)
Translates to: GSSGISEPWEHMSSDRSSSLSSS*NMRALS
Trigger: ACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGA...AGATGAGCGGTCTGATGACATGTGCTCCCAGGGCTCAGAAATCCCACTGGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR TCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGAGTCTCCCTCGAGCCTaGCTTACGGCTGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQSLPRA*LTAGTA
Trigger: GGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACT...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR TCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTAAGTCTCCCTCGAGCCTaGCTTACGGCTGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLSLPRA*LTAGTA
Trigger: GGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACT...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR GCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGAGTGGTTTTCTCTCCTaGCCCTCCCACCGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQSGFLS*PSHRPS
Trigger: GGAGGGGCGGTGGGAGGGGCAGGAGAGAAAACCACT...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR GCA 90 bp TCTGGCCTTTTGCTATGGGGTGACAGCTTCTGTGGCACATTCCTCTTCTTGATATCCTCTTCTAGGCGGTaGAGACAGGTCCCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: SGLLLWGDSFCGTFLFLISSSRR*RQVPSD
Trigger: GTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGA...TATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCAGCCTGACTTACGGCTaGGACAGCCCCATCTTTCTG +
Preference number: 2 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPSLTYG*DSPIFL
Trigger: CAGAAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCT...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR CCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAAAAGTGCAGTCTAAGTaGTTTTCTCTCCTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPKVQSK*FSLLPL
Trigger: GAGGGGCAGGAGAGAAAACCACTTAGACTGCACTTT...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR TCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGCCCGGTTCTTCAGCCTaGGCCATCACATGCTATCAG +
Preference number: 2 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGPGSSA*AITCYQ
Trigger: CTGATAGCATGTGATGGCTCAGGCTGAAGAACCGGG...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR TCA 90 bp TGTCTACCTCTCCTTCCTCCTCTTCCGATGAGATGCCACGTTTCTGACTTCGGGCAGACAGGTCCCTTCTaGCTTAATCTTTTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: CLPLLPPLPMRCHVSDFGQTGPF*LNLFKV
Trigger: CACTTTGAAAAGATTAAGTCAGAAGGGACCTGTCTG...CCCGAAGTCAGAAACGTGGCATCTCATCGGAAGAGGAGGAAGGAGAGGTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR TCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGAGTTACATTGCCACCTaGGAAACCTCAGAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGSYIAT*ETSEGR
Trigger: CCTCCCCTCTGAGGTTTCTCAGGTGGCAATGTAACT...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR CCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTACCACTAGGGAGGGGGTaGGGGAAAGGAATGACACAT +
Preference number: 2 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLPLGRG*GKGMTH
Trigger: ATGTGTCATTCCTTTCCCCCACCCCCTCCCTAGTGG...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR GCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTAACAGCTCTACGGCTGTaGCTCATTCATTTCCACAGC +
Preference number: 2 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLTALRL*LIHFHS
Trigger: GCTGTGGAAATGAATGAGGCACAGCCGTAGAGCTGT...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR GCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCAACGGAACAGAAAAGTaGAGTCTAAGTGGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPNGTEK*SLSGFL
Trigger: GAGAAAACCACTTAGACTGCACTTTTCTGTTCCGTT...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR TCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGGCCCCATCTTTCTGTTaGTTATGTGGCGCATATATA +
Preference number: 2 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVAPSFC*LCGAYI
Trigger: TATATATGCGCCACATAATCAACAGAAAGATGGGGC...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR TCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGCTAGAGTTTATCAGGTaGATTGGTCAGGGGATCAGT +
Preference number: 2 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQLEFIR*IGQGIS
Trigger: ACTGATCCCCTGACCAATTCACCTGATAAACTCTAG...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR GCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCAAAAATGAGTTACATTaGCACCTGAGAAACCTCAGA +
Preference number: 2 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPKNELH*HLRNLR
Trigger: TCTGAGGTTTCTCAGGTGGCAATGTAACTCATTTTT...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR CCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTAACAGCTGGGCCTGCATaGAGTGTTATATTTCAAGGT +
Preference number: 2 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLTAGPA*SVIFQG
Trigger: ACCTTGAAATATAACACTCCATGCAGGCCCAGCTGT...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR TCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGGCCCCATCTTTCTGTTaGTTATGTGGCGCATATATA +
Preference number: 2 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQAPSFC*LCGAYI
Trigger: TATATATGCGCCACATAATCAACAGAAAGATGGGGC...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR CCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTAAAACCCTCAACAGCTaGGCCTGCATGGAGTGTTAT +
Preference number: 2 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSKTLNS*ACMECY
Trigger: ATAACACTCCATGCAGGCCCAGCTGTTGAGGGTTTT...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR CAA 90 bp CCAGCCCGGCTTCCTCCCCGGCCTGAGGTCCCTTCCCTTCCAGTTCCCAGAAGCGGGCTGAGCCCTCACTaGGTGGGGTGTCACCCCGGG +
Preference number: 3 (lower is better)
Translates to: PARLPPRPEVPSLPVPRSGLSPH*VGCHPG
Trigger: CCCGGGGTGACACCCCACCAAGTGAGGGCTCAGCCC...GCTTCTGGGAACTGGAAGGGAAGGGACCTCAGGCCGGGGAGGAAGCCGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CCA 72 bp ACTTCGGGTGACGGCAGCCCTGTACAGCAGTGCAGCTaGGGTCAAGTGCTGGGACCCAGCCCGGCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: TSGDGSPVQQCS*GQVLGPSPASS
Trigger: GGAGGAAGCCGGGCTGGGTCCCAGCACTTGACCCCAGCTGCACTGCTGTACAGGGCTGCCGTCACCCGAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR GCA 72 bp TTTCTGACTTCGGGTGACGGCAGCCCTGTACAGCAGTaGAGCTGGGGTCAAGTGCTGGGACCCAGCCCGGCT +
Preference number: 3 (lower is better)
Translates to: FLTSGDGSPVQQ*SWGQVLGPSPA
Trigger: AGCCGGGCTGGGTCCCAGCACTTGACCCCAGCTGCACTGCTGTACAGGGCTGCCGTCACCCGAAGTCAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CCA 72 bp CTTCACCAGGCCCTACTGGAGGAGGTGGTTCCCCTTTaGCTCCCCCAGGTGAATCTGGGCTGGTGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: LHQALLEEVVPL*LPQVNLGWWSQ
Trigger: CTGGCTCCACCAGCCCAGATTCACCTGGGGGAGCCAAAGGGGAACCACCTCCTCCAGTAGGGCCTGGTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CCA 72 bp TCAGAATTGGGAGGGCCCCGCTCTCTGAGAAGTTCCTaGTGTGGAATGGGCAGGGAGCTGGGTTCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: SELGGPRSLRSS*CGMGRELGSGP
Trigger: TGGCCCTGAACCCAGCTCCCTGCCCATTCCACACCAGGAACTTCTCAGAGAGCGGGGCCCTCCCAATTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR GCA 72 bp CAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTaGCAACTTCAGGTGTGCCACTGGGGGAAGGTTCAC +
Preference number: 3 (lower is better)
Translates to: QTAHLAAHQCWC*QLQVCHWGKVH
Trigger: GTGAACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CCA 72 bp TCTGAAGGAGGTGGGTCCAGTGGGATTTCTGAGCCCTaGGAGCACATGTCATCAGACCGCTCATCTGGCCGC +
Preference number: 3 (lower is better)
Translates to: SEGGGSSGISEP*EHMSSDRSSGR
Trigger: GCGGCCAGATGAGCGGTCTGATGACATGTGCTCCCAGGGCTCAGAAATCCCACTGGACCCACCTCCTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CAA 90 bp AGCCCCACACCTTCACCAGGCCCTACTGGAGGAGGTGGTTCCCCTTTGGCTCCCAGTTCCATATACAGGTaGTTGGCTCTCTCCAGCTTC +
Preference number: 3 (lower is better)
Translates to: SPTPSPGPTGGGGSPLAPSSIYR*LALSSF
Trigger: GAAGCTGGAGAGAGCCAACAACCTGTATATGGAACT...GGGAGCCAAAGGGGAACCACCTCCTCCAGTAGGGCCTGGTGAAGGTGTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CAA 90 bp TCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAAGCAGCTCCCTCTCCTaGAGTTCCAGCTGCAACATG +
Preference number: 3 (lower is better)
Translates to: SGRSSVLVLPTSGVPLGESSSLS*SSSCNM
Trigger: CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCT...TTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CAA 90 bp ATCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAGAGGCCACCTCTGGCTaGATGTCAGCTCTACTTCAC +
Preference number: 3 (lower is better)
Translates to: IWPLISVGAANFRCATGGEATSG*MSALLH
Trigger: GTGAAGTAGAGCTGACATCAAGCCAGAGGTGGCCTC...TCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR GCA 72 bp CATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTaGTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTT +
Preference number: 3 (lower is better)
Translates to: HQTAHLAAHQCW*CQLQVCHWGKV
Trigger: AACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CCA 72 bp TGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTaGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAG +
Preference number: 3 (lower is better)
Translates to: CHQTAHLAAHQC*CCQLQVCHWGK
Trigger: CTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CCA 72 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTaGGACAGCCCCATCTTTCTGTTGATTATGTGGCGC +
Preference number: 3 (lower is better)
Translates to: SGDQSPSSLTYG*DSPIFLLIMWR
Trigger: GCGCCACATAATCAACAGAAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR CCA 72 bp GGAGGGAAGCTGGGGGCCGCAAGGCATCAACGCTGTTaGAGTTGTCCAATTCAGTGCTGTCACAGTCTGAGT +
Preference number: 3 (lower is better)
Translates to: GGKLGAARHQRC*SCPIQCCHSLS
Trigger: ACTCAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCAGCTTCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CAA 90 bp GGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCAGGATATCTGGCCTTTaGCTATGGGGTGACAGCTTC +
Preference number: 3 (lower is better)
Translates to: GAHVIRPLIWPLISVGAARISGL*LWGDSF
Trigger: GAAGCTGTCACCCCATAGCAAAAGGCCAGATATCCT...GGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR TCA 72 bp GCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGTCTaGGTCCTCAGAATTGGGAGGGCCCCGCTCTCTGAG +
Preference number: 3 (lower is better)
Translates to: AVGVVQFSAVTV*VLRIGRAPLSE
Trigger: CTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGAATTGGACAACTCCAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR TCA 72 bp AAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTaGGCCATCACATGCTATCAGTCTCCTAACCTCCCC +
Preference number: 3 (lower is better)
Translates to: KQGLKQHPGSSA*AITCYQSPNLP
Trigger: GGGGAGGTTAGGAGACTGATAGCATGTGATGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR GCA 72 bp TTCCTCTTCTTGATAAGCTTCTCCATTGTGTTTCCATaGAGGAGGCCCCGGGAAGGGTGTGGCTTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: FLFLISFSIVFP*RRPREGCGFSR
Trigger: CCTGCTGAAGCCACACCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGAGAAGCTTATCAAGAAGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CAA 90 bp TCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGCACATTCCTCTTCTaGATAAGCTTCTCCATTGTG +
Preference number: 3 (lower is better)
Translates to: SGRSSVLVLPTSGVPLGEGTFLF*ISFSIV
Trigger: CACAATGGAGAAGCTTATCAAGAAGAGGAATGTGCC...TTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CAA 90 bp CGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTTCAAGCAAAGACTCCGTCTaGAGGATATCTGGCCTTTTG +
Preference number: 3 (lower is better)
Translates to: RSSVLVLPTSGVPLGEGSSKDSV*RISGLL
Trigger: CAAAAGGCCAGATATCCTCAAGACGGAGTCTTTGCT...TGAACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR GCA 72 bp GCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTaGTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGC +
Preference number: 3 (lower is better)
Translates to: ARHQRCWSCPIQ*CHSLSPQNWEG
Trigger: GCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CCA 72 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTaGTCAGGGGATCAGTCTCCCTCGAGCCTGACTTAC +
Preference number: 3 (lower is better)
Translates to: TAASVPRVYQVN*SGDQSPSSLTY
Trigger: GTAAGTCAGGCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR CCA 72 bp GAGCCATCACATGCTATCAGTCTCCTAACCTCCCCCTaGGCCTTAAGACAGGGCTTGGGCAGAGAAGATAAA +
Preference number: 3 (lower is better)
Translates to: EPSHAISLLTSP*ALRQGLGREDK
Trigger: TTTATCTTCTCTGCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGATGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR CAA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAAGTTTATCAGGTGAATaGGTCAGGGGATCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPSLSGE*VRGSVS
Trigger: GGAGACTGATCCCCTGACCAATTCACCTGATAAACT...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR GCA 72 bp TCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTaGAACATGAGGGCATTAAGTTCCATATACAGGTTG +
Preference number: 3 (lower is better)
Translates to: SRLSSSLSLSSS*NMRALSSIYRL
Trigger: CAACCTGTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CAA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGAGCCCCATCTTTCTGTaGATTATGTGGCGCATATAT +
Preference number: 3 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPESPIFL*IMWRIY
Trigger: ATATATGCGCCACATAATCAACAGAAAGATGGGGCT...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR CAA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCACTATTGCCTTGTTGCTaGCTGAATATAAGGAATGGG +
Preference number: 3 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPLLPCC*LNIRNG
Trigger: CCCATTCCTTATATTCAGCAAGCAACAAGGCAATAG...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR CAA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCGCCTTAAGACAGGGCTaGGGCAGAGAAGATAAATGG +
Preference number: 3 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPALRQG*GREDKW
Trigger: CCATTTATCTTCTCTGCCCAAGCCCTGTCTTAAGGC...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR TCA 72 bp CTCCGTCTTGAGGATATCTGGCCTTTTGCTATGGGGTaGCAGCTTCTGTGGCACATTCCTCTTCTTGATAAG +
Preference number: 3 (lower is better)
Translates to: LRLEDIWPFAMG*QLLWHIPLLDK
Trigger: CTTATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGATATCCTCAAGACGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR-3UTR CAA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGGGCTTTTCTATTGCCTaGTTGCTTGCTGAATATAAG +
Preference number: 3 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRGFSIA*LLAEYK
Trigger: CTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCC...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR CCA 72 bp GCAGTTGATCATATGTCTGACTGGGTTCCAGTTTCTTaGGAATGTTGGTCCCCTTGTTCAGGCTTGCATATT +
Preference number: 3 (lower is better)
Translates to: AVDHMSDWVPVS*ECWSPCSGLHI
Trigger: AATATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGACATATGATCAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR CAA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGAGTTTATCAGGTGAATaGGTCAGGGGATCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQSLSGE*VRGSVS
Trigger: GGAGACTGATCCCCTGACCAATTCACCTGATAAACT...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR CAA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCGGCTTTTCTATTGCCTaGTTGCTTGCTGAATATAAG +
Preference number: 3 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPGFSIA*LLAEYK
Trigger: CTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCC...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR-3UTR CAA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGAGCCCCATCTTTCTGTaGATTATGTGGCGCATATAT +
Preference number: 3 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGSPIFL*IMWRIY
Trigger: ATATATGCGCCACATAATCAACAGAAAGATGGGGCT...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CCAGCCCGGCTTCCTCCCCGGCCTGAGGTCCCTTCCCTTCCAGTTCCCAGAAGCAGTACCTCATACAGCTaGCCCTGGGCGCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: PARLPPRPEVPSLPVPRSSTSYS*PWAQNS
Trigger: GGAGTTCTGCGCCCAGGGCCAGCTGTATGAGGTACT...GCTTCTGGGAACTGGAAGGGAAGGGACCTCAGGCCGGGGAGGAAGCCGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CAA 72 bp CCTTCACCAGGCCCTACTGGAGGAGGTGGTTCCCCTTaGGCTCCCCCAGGTGAATCTGGGCTGGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PSPGPTGGGGSP*APPGESGLVEP
Trigger: TGGCTCCACCAGCCCAGATTCACCTGGGGGAGCCAAAGGGGAACCACCTCCTCCAGTAGGGCCTGGTGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp GGGTCCAGTGGGATTTCTGAGCCCTGGGAGCACATGTCATCAGACCGCTCATCTGCGCTGGCCTTGCGGTaGCGGGTCTTGCCACGGCGA +
Preference number: 4 (lower is better)
Translates to: GSSGISEPWEHMSSDRSSALALR*RVLPRR
Trigger: TCGCCGTGGCAAGACCCGTCACCGCAAGGCCAGCGC...AGATGAGCGGTCTGATGACATGTGCTCCCAGGGCTCAGAAATCCCACTGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp AAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGCCGGGCCGGAGGTGGTaGGCCAGGATCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KACSRLSSSLSLSSSCNMPGRRW*ARIPSS
Trigger: GGAGCTGGGGATCCTGGCTCACCACCTCCGGCCCGG...CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp AGGCCTGGGCACCTCCGCTCTAAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCAGGCACAGACTGGGGTaGTGGGTTCACAGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: RPGHLRSKACSRLSSSLSRHRLG*WVHSSP
Trigger: GGGGCTACTGTGAACCCAGCACCCCAGTCTGTGCCT...GGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTTAGAGCGGAGGTGCCCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp ATCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAGCCCCGGGAAGGGTGTaGCTTCAGCAGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: IWPLISVGAANFRCATGGAPGRV*LQQAWA
Trigger: TGCCCAGGCCTGCTGAAGCCACACCCTTCCCGGGGC...TCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp TCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAACCCCACAGCTCCCCTTaGCGCTGGCCTTGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SGRSSVLVLPTSGVPLGEPHSSP*RWPCGD
Trigger: GTCACCGCAAGGCCAGCGCCAAGGGGAGCTGTGGGG...TTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp CCAGCCCGGCTTCCTCCCCGGCCTGAGGTCCCTTCCCTTCCAGTTCCCAGAAGCTTCACCAGGCCCTACTaGAGGAGGTGGTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PARLPPRPEVPSLPVPRSFTRPY*RRWFPF
Trigger: AAAGGGGAACCACCTCCTCCAGTAGGGCCTGGTGAA...GCTTCTGGGAACTGGAAGGGAAGGGACCTCAGGCCGGGGAGGAAGCCGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAATGCGGTGACGGGTCTTaGCACGGCGACTCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: SGRSSVLVLPTSGVPLGECGDGS*HGDSVL
Trigger: CAGGACGGAGTCGCCGTGGCAAGACCCGTCACCGCA...TTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCGCCCCGGGAAGGGTGTaGCTTCAGCAGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SHAISLLTSPWALRQGLGAPGRV*LQQAWA
Trigger: TGCCCAGGCCTGCTGAAGCCACACCCTTCCCGGGGC...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCCCCCACAGCTCCCCTTaGCGCTGGCCTTGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SHAISLLTSPWALRQGLGPHSSP*RWPCGD
Trigger: GTCACCGCAAGGCCAGCGCCAAGGGGAGCTGTGGGG...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp TCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGCCCCCTGGGCTTCCTaGTCCTCCAGGTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: SGRSSVLVLPTSGVPLGEAPWAS*SSRFMG
Trigger: CCCCATGAACCTGGAGGACCAGGAAGCCCAGGGGGC...TTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp GGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTGTGAATCTGGGCTGGTaGAGCCAGGGGCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GRSSVLVLPTSGVPLGEGVNLGW*SQGLSP
Trigger: AGGGCTCAGCCCCTGGCTCCACCAGCCCAGATTCAC...ACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp GGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTCCCTACTGGAGGAGGTaGTTCCCCTTTGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GRSSVLVLPTSGVPLGEGPYWRR*FPFGSP
Trigger: GGGGGAGCCAAAGGGGAACCACCTCCTCCAGTAGGG...ACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTGCTGGGGTCAAGTGCTaGGACCCAGCCCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFAGVKC*DPARLP
Trigger: AGGAAGCCGGGCTGGGTCCCAGCACTTGACCCCAGC...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CTCCAGGTTCATGGGGTGGCACAGCTGTACGAAGCCCAGGCAGGTCCCCACAGCGTTCCTGGTGTGGAATaGGCAGGGAGCTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LQVHGVAQLYEAQAGPHSVPGVE*AGSWVQ
Trigger: CTGAACCCAGCTCCCTGCCCATTCCACACCAGGAAC...GCTGTGGGGACCTGCCTGGGCTTCGTACAGCTGTGCCACCCCATGAACCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp CCAGCCCGGCTTCCTCCCCGGCCTGAGGTCCCTTCCCTTCCAGTTCCCAGAAGCTGGCTCCGTTTCCCATaGCCCTCCAAATTGCACCTT +
Preference number: 4 (lower is better)
Translates to: PARLPPRPEVPSLPVPRSWLRFP*PSKLHL
Trigger: AAGGTGCAATTTGGAGGGCCATGGGAAACGGAGCCA...GCTTCTGGGAACTGGAAGGGAAGGGACCTCAGGCCGGGGAGGAAGCCGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp AGCTTCTCCATTGTGTTTCCATGCAGGAGGCCCCGGGAAGGGTGTGGCTTCAGCTGTCCAGGGCGTGTCTaGGCTCCTCCCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SFSIVFPCRRPREGCGFSCPGRV*APPSSS
Trigger: TGAGGAGGAGGGAGGAGCTCAGACACGCCCTGGACA...GCTGAAGCCACACCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGAGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCCCGGGCCGGAGGTGGTaGGCCAGGATCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSPGRRW*ARIPSS
Trigger: GGAGCTGGGGATCCTGGCTCACCACCTCCGGCCCGG...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp GGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTGTTCAGGGCCAGGGATaGCCTCTGAAGGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GRSSVLVLPTSGVPLGEGVQGQG*PLKEVG
Trigger: ACCCACCTCCTTCAGAGGTCATCCCTGGCCCTGAAC...ACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp CCAGCCCGGCTTCCTCCCCGGCCTGAGGTCCCTTCCCTTCCAGTTCCCAGAAGCCAGTGGAGTAGGCTTTaGCAATCATGGTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: PARLPPRPEVPSLPVPRSQWSRL*QSWSRQ
Trigger: CTGTCTGGACCATGATTGGCAAAGCCTACTCCACTG...GCTTCTGGGAACTGGAAGGGAAGGGACCTCAGGCCGGGGAGGAAGCCGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp GGGTCCAGTGGGATTTCTGAGCCCTGGGAGCACATGTCATCAGACCGCTCATCTGCAGCTGGGGTCAAGTaGTGGGACCCAGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GSSGISEPWEHMSSDRSSAAGVK*WDPARL
Trigger: AAGCCGGGCTGGGTCCCAGCACTTGACCCCAGCTGC...AGATGAGCGGTCTGATGACATGTGCTCCCAGGGCTCAGAAATCCCACTGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp GGAGGTGGTTCCCCTTTGGCTCCCCCAGGTGAATCTGGGCTGGTGGAGCCAGGGCATCAGTGTTGGTGCTaGCAACTTCAGGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GGGSPLAPPGESGLVEPGHQCWC*QLQVCH
Trigger: GTGGCACACCTGAAGTTGGCAGCACCAACACTGATG...CCCTGGCTCCACCAGCCCAGATTCACCTGGGGGAGCCAAAGGGGAACCACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTAGTGGTTTTCTCTCCTaGCCCTCCCACCGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFSGFLS*PSHRPS
Trigger: GGAGGGGCGGTGGGAGGGGCAGGAGAGAAAACCACT...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTTATGATGGTGAACACTaGGCCCTCGGGGGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFYDGEH*ALGGSA
Trigger: CGCGGAGCCCCCGAGGGCCCAGTGTTCACCATCATA...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CTCCAGGTTCATGGGGTGGCACAGCTGTACGAAGCCCAGGCAGGTCCCCACAGCGCAGTCAGAAGTGTCTaGGTCCAGCTTGCGCATGGA +
Preference number: 4 (lower is better)
Translates to: LQVHGVAQLYEAQAGPHSAVRSV*VQLAHG
Trigger: TCCATGCGCAAGCTGGACCCAGACACTTCTGACTGC...GCTGTGGGGACCTGCCTGGGCTTCGTACAGCTGTGCCACCCCATGAACCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTTGGAGGGAGGGAAGCTaGGGGCCGCAAGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFWREGS*GPQGIN
Trigger: GTTGATGCCTTGCGGCCCCCAGCTTCCCTCCCTCCA...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ATCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAGGGCGCAGAACTCCATaGGGATGCAGTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: IWPLISVGAANFRCATGGGRRTP*GCSSRE
Trigger: CTCCCTGCTACTGCATCCTCATGGAGTTCTGCGCCC...TCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCCGTGCGGTGTCCGGATaGACGGGTGTCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SHAISLLTSPWALRQGLGRAVSG*TGVSFS
Trigger: GCTGAAGCTGACACCCGTGCATCCGGACACCGCACG...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267079.6
CDS-3UTR GCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTGGGCCCCCTGCATCCTaGTCATGTAGCTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFGPPAS*SCSCRT
Trigger: TGTCCTGCAGCTACATGAGCAGGATGCAGGGGGCCC...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp GGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCCTGCCACTCTGGCACTaGAGTCGCACCTCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GAHVIRPLIWPLISVGAALPLWH*SRTSSA
Trigger: AGCTGACGAGGTGCGACTGCAGTGCCAGAGTGGCAG...GGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp GGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCTTCTTCCCGCCACTCTaGCCACAGCACACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GAHVIRPLIWPLISVGAAFFPPL*PQHTWD
Trigger: GTCCCAGGTGTGCTGTGGGCAGAGTGGCGGGAAGAA...GGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp GGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCAAGCCACTGCCACTCTaGCACTGCAGTCGCACCTCG +
Preference number: 4 (lower is better)
Translates to: GAHVIRPLIWPLISVGAAKPLPL*HCSRTS
Trigger: CGAGGTGCGACTGCAGTGCCAGAGTGGCAGTGGCTT...GGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp AGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCAAGCCACCTCCTCCCCGTaGAAGCGCCCCAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: STCHQTAHLAAHQCWCCQATSSP*KRPRKT
Trigger: TGTCTTCCTGGGGCGCTTCCACGGGGAGGAGGTGGC...TTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp AGGCCTGGGCACCTCCGCTCTAAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCAAGTCTCCTGGGGTGTaGAGAGTACATCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RPGHLRSKACSRLSSSLSKSPGV*RVHQLR
Trigger: CCTCAGCTGATGTACTCTCCACACCCCAGGAGACTT...GGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTTAGAGCGGAGGTGCCCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp TGGGGGCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAAGCTCCCCTTGGCGCTaGCCTTGCGGTGACGGGTCT +
Preference number: 4 (lower is better)
Translates to: WGPQGINAVGVVQFSAVTSSPWR*PCGDGS
Trigger: AGACCCGTCACCGCAAGGCCAGCGCCAAGGGGAGCT...TGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp CGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTTCACAGGTGAATCTGGGCTaGTGGAGCCAGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RSSVLVLPTSGVPLGEGSQVNLG*WSQGLS
Trigger: GCTCAGCCCCTGGCTCCACCAGCCCAGATTCACCTG...TGAACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp AGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCAAGCTGGGGTCAAGTGCTaGGACCCAGCCCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: STCHQTAHLAAHQCWCCQAGVKC*DPARLP
Trigger: AGGAAGCCGGGCTGGGTCCCAGCACTTGACCCCAGC...TTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp AGGCCTGGGCACCTCCGCTCTAAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCATCAGACCGCTCATCTaGCCGCTCATCAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: RPGHLRSKACSRLSSSLSIRPLI*PLISVG
Trigger: ACCAACACTGATGAGCGGCCAGATGAGCGGTCTGAT...GGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTTAGAGCGGAGGTGCCCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCTGGAGGGAGGGAAGCTaGGGGCCGCAAGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: SHAISLLTSPWALRQGLGWREGS*GPQGIN
Trigger: GTTGATGCCTTGCGGCCCCCAGCTTCCCTCCCTCCA...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATGCGCTGGCCTTGCGGTaGCGGGTCTTGCCACGGCGA +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHALALR*RVLPRR
Trigger: TCGCCGTGGCAAGACCCGTCACCGCAAGGCCAGCGC...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTGCGCTGGCCTTGCGGTaGCGGGTCTTGCCACGGCGA +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSALALR*RVLPRR
Trigger: TCGCCGTGGCAAGACCCGTCACCGCAAGGCCAGCGC...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp AAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGGCCAGGGATGACCTCTaGAGGAGGTGGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: KACSRLSSSLSLSSSCNMARDDL*RRWVQW
Trigger: CCACTGGACCCACCTCCTTCAGAGGTCATCCCTGGC...CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp GGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCCCTGAGCCCACCCACTaGAGGTCCAGGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GAHVIRPLIWPLISVGAAPEPTH*RSRISS
Trigger: TGAGGAAATCCTGGACCTGCAGTGGGTGGGCTCAGG...GGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp GGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTTCATGCCACCAGCGATaGCCATGGACCAGTCAACCA +
Preference number: 4 (lower is better)
Translates to: GRSSVLVLPTSGVPLGEGSCHQR*PWTSQP
Trigger: TGGTTGACTGGTCCATGGGCATCGCTGGTGGCATGA...ACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTGGTGCAGGTAGTTCATaGCACCAGCGATGCCCATGG +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFGAGSS*HQRCPW
Trigger: CCATGGGCATCGCTGGTGGCATGAACTACCTGCACC...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTCTCCGCTCTAAAGCTTaGTCTCGCCTGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFLRSKA*SRLSSS
Trigger: GGAGCTGCTCAGGCGAGAGCAAGCTTTAGAGCGGAG...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCTTGGCGCTGGCCTTaGGGTGACGGGTCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPEPWRWP*GDGSCH
Trigger: GTGGCAAGACCCGTCACCGCAAGGCCAGCGCCAAGG...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGCTTCTCCATTGTGTTTCCATGCAGGAGGCCCCGGGAAGGGTGTGGCTTCAGCAGCCCTGTACAGCAGTaGAGCTGGGGTCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SFSIVFPCRRPREGCGFSSPVQQ*SWGQVL
Trigger: CAGCACTTGACCCCAGCTGCACTGCTGTACAGGGCT...GCTGAAGCCACACCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGAGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp ATCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAGGTGTTCGGGTCTCATaGAGGCAAGCCATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: IWPLISVGAANFRCATGGGVRVS*RQAIAS
Trigger: AGAGGCGATGGCTTGCCTCCATGAGACCCGAACACC...TCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTAGGCTTTGCCAATCATaGTCCAGACAGGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFRLCQS*SRQGAG
Trigger: GCCTGCGCCCTGTCTGGACCATGATTGGCAAAGCCT...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTTCATACAGCTGGCCCTaGGCGCAGAACTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFSYSWP*AQNSMR
Trigger: CCTCATGGAGTTCTGCGCCCAGGGCCAGCTGTATGA...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp TTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGAGGGCAACCATCTGGGCAACTaGAGGGCACGGGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: LLSPEQLPLLEFQLQHEGNHLGN*RARADG
Trigger: TCCATCTGCCCGTGCCCTCCAGTTGCCCAGATGGTT...GCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGAGCTCCCCTTGGCGCTaGCCTTGCGGTGACGGGTCT +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPESSPWR*PCGDGS
Trigger: AGACCCGTCACCGCAAGGCCAGCGCCAAGGGGAGCT...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGCTTCTCCATTGTGTTTCCATGCAGGAGGCCCCGGGAAGGGTGTGGCTTCAGCTCCAGGTTCATGGGGTaGCACAGCTGTACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SFSIVFPCRRPREGCGFSSRFMG*HSCTKP
Trigger: GGGCTTCGTACAGCTGTGCCACCCCATGAACCTGGA...GCTGAAGCCACACCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGAGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAGCCCCCTGGGCTTCCTaGTCCTCCAGGTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPAPWAS*SSRFMG
Trigger: CCCCATGAACCTGGAGGACCAGGAAGCCCAGGGGGC...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ATGAAGACATTTTGCGGAGCAGGAGGTCATGATGAAGCCCACGGAGGGCGGGAGGTACAGCAGTGCAGCTaGGGTCAAGTGCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: MKTFCGAGGHDEAHGGREVQQCS*GQVLGP
Trigger: GGGTCCCAGCACTTGACCCCAGCTGCACTGCTGTAC...CTCCCGCCCTCCGTGGGCTTCATCATGACCTCCTGCTCCGCAAAATGTCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp TGGGGGCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACATGGAGGGAGGGAAGCTaGGGGCCGCAAGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: WGPQGINAVGVVQFSAVTWREGS*GPQGIN
Trigger: GTTGATGCCTTGCGGCCCCCAGCTTCCCTCCCTCCA...TGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp TTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGAGGGCGGCGAAGCAGGATCTTaGAACCATCTGGGCAACTGG +
Preference number: 4 (lower is better)
Translates to: LLSPEQLPLLEFQLQHEGGEAGS*NHLGNW
Trigger: CCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCC...GCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCATGTCCAGGGCGTGTCTaGGCTCCTCCCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPCPGRV*APPSSS
Trigger: TGAGGAGGAGGGAGGAGCTCAGACACGCCCTGGACA...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTCAGGTCTGGGGACGATaGAGACATTTTGCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFQVWGR*RHFAEQ
Trigger: CTGCTCCGCAAAATGTCTTCATCGTCCCCAGACCTG...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp GGAGGTGGTTCCCCTTTGGCTCCCCCAGGTGAATCTGGGCTGGTGGAGCCAGGGGACAGGTATCGTACCTaGGTATCATTCTCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: GGGSPLAPPGESGLVEPGDRYRT*VSFSGN
Trigger: GTTACCTGAGAATGATACTCAGGTACGATACCTGTC...CCCTGGCTCCACCAGCCCAGATTCACCTGGGGGAGCCAAAGGGGAACCACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGCACAGGCGATGCTCGTaGGGTGTCCGGATGCACGGG +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRHRRCS*GVRMHG
Trigger: CCCGTGCATCCGGACACCGCACGAGCATCGCCTGTG...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267079.6
CDS-3UTR GCA 90 bp TTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGAGGGCGGTCCTTCTCGGGAGTaGAGTCAGAAGTGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLSPEQLPLLEFQLQHEGGPSRE*SQKCLG
Trigger: ACCCAGACACTTCTGACTGCACTCCCGAGAAGGACC...GCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCCCTGAGCCCACCCACTaGAGGTCCAGGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SHAISLLTSPWALRQGLGPEPTH*RSRISS
Trigger: TGAGGAAATCCTGGACCTGCAGTGGGTGGGCTCAGG...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp CCAGCCCGGCTTCCTCCCCGGCCTGAGGTCCCTTCCCTTCCAGTTCCCAGAAGCTCAGCTCCTTGGAAGTaGCAAAATCTGAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: PARLPPRPEVPSLPVPRSSAPWK*QNLRSS
Trigger: TGAAGATCTCAGATTTTGGCACTTCCAAGGAGCTGA...GCTTCTGGGAACTGGAAGGGAAGGGACCTCAGGCCGGGGAGGAAGCCGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp ATGAAGACATTTTGCGGAGCAGGAGGTCATGATGAAGCCCACGGAGGGCGGGAGCTCCGCTCTAAAGCTTaGTCTCGCCTGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MKTFCGAGGHDEAHGGRELRSKA*SRLSSS
Trigger: GGAGCTGCTCAGGCGAGAGCAAGCTTTAGAGCGGAG...CTCCCGCCCTCCGTGGGCTTCATCATGACCTCCTGCTCCGCAAAATGTCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCTGCGGTGACGGGTCTTaGCACGGCGACTCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSCGDGS*HGDSVL
Trigger: CAGGACGGAGTCGCCGTGGCAAGACCCGTCACCGCA...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp GGGTCCAGTGGGATTTCTGAGCCCTGGGAGCACATGTCATCAGACCGCTCATCTCGTCAGCTCGAACTCTaGATGCCCGACTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: GSSGISEPWEHMSSDRSSRQLEL*MPDSQV
Trigger: CACCTGAGAGTCGGGCATCCAGAGTTCGAGCTGACG...AGATGAGCGGTCTGATGACATGTGCTCCCAGGGCTCAGAAATCCCACTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp TCAGTGCTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGCCCCGCTCTCTGAGAAGGCTTTGCCAATCATaGTCCAGACAGGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: SVLSQSESSELGGPRSLRRLCQS*SRQGAG
Trigger: GCCTGCGCCCTGTCTGGACCATGATTGGCAAAGCCT...TCTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp CGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTTCAGAGGGCACGGGCAGATaGAGACTGTTGCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: RSSVLVLPTSGVPLGEGSEGTGR*RLLLPT
Trigger: TGTGGGAAGCAACAGTCTCCATCTGCCCGTGCCCTC...TGAACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTGATCTTGAAACCATCTaGGCAACTGGAGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFDLETI*ATGGHG
Trigger: CCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATC...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCAGGTGAATCTGGGCTaGTGGAGCCAGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPEQVNLG*WSQGLS
Trigger: GCTCAGCCCCTGGCTCCACCAGCCCAGATTCACCTG...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCCTACTGGAGGAGGTaGTTCCCCTTTGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPEPYWRR*FPFGSP
Trigger: GGGGGAGCCAAAGGGGAACCACCTCCTCCAGTAGGG...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ATCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAGCCGCTCATCAGTGTTaGTGCTGCCAACTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: IWPLISVGAANFRCATGGAAHQC*CCQLQV
Trigger: CACCTGAAGTTGGCAGCACCAACACTGATGAGCGGC...TCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp GGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTTCTCTGAGAAGTTCCTaGTGTGGAATGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRSSVLVLPTSGVPLGEGSLRSS*CGMGRE
Trigger: CTCCCTGCCCATTCCACACCAGGAACTTCTCAGAGA...ACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CAA 72 bp GGGAGGGAAGCTGGGGGCCGCAAGGCATCAACGCTGTaGGAGTTGTCCAATTCAGTGCTGTCACAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GREAGGRKASTL*ELSNSVLSQSE
Trigger: CTCAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCAGCTTCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTGGAGAGTACATCAGCTaGGGCAATGTCCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFGEYIS*GNVQMQ
Trigger: CTGCATCTGGACATTGCCTCAGCTGATGTACTCTCC...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCGGTGGAGCCAGGGGCTaGGCCCTCACTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPGGARG*ALTWWG
Trigger: ACCCCACCAAGTGAGGGCTCAGCCCCTGGCTCCACC...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp TGGGGGCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGTTTCTGACTTCGGGTaGCGGCAGCCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: WGPQGINAVGVVQFSAVTVSDFG*RQPCTA
Trigger: TGCTGTACAGGGCTGCCGTCACCCGAAGTCAGAAAC...TGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGGCCAGGGATGACCTCTaGAGGAGGTGGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRARDDL*RRWVQW
Trigger: CCACTGGACCCACCTCCTTCAGAGGTCATCCCTGGC...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCCGCTGTCACAGGCGATaGTCGTGCGGTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSRCHRR*SCGVRM
Trigger: CATCCGGACACCGCACGAGCATCGCCTGTGACAGCG...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267079.6
CDS-3UTR GCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCTCCGCTCCGGATGCTaGTCCCGCCTCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSLRSGC*SRLLLL
Trigger: AAGGAGGAGGAGGCGGGAGCAGCATCCGGAGCGGAG...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267079.6
CDS-3UTR GCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTTGTCTGGGTCCAGCTTaGGCATGGATGCCTCACTTA +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFCLGPA*AWMPHL
Trigger: TAAGTGAGGCATCCATGCGCAAGCTGGACCCAGACA...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ATCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGATCCCAAAGGTCTTCCTaGTGCTGCTTGTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: IWPLISVGAANFRCATGGSQRSS*CCLCSV
Trigger: CACTGAGCACAAGCAGCAGCAGGAAGACCTTTGGGA...TCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp AGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCAATCCATTGTGTTTCCATaGAGGAGGCCCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: STCHQTAHLAAHQCWCCQSIVFP*RRPREG
Trigger: CCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGA...TTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTCATCAGTGTTGGTGCTaGCAACTTCAGGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFHQCWC*QLQVCH
Trigger: GTGGCACACCTGAAGTTGGCAGCACCAACACTGATG...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp GGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCGCTCATCAGTGTTGGTaGTGCCAACTTCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: GAHVIRPLIWPLISVGAAAHQCW*CQLQVC
Trigger: GCACACCTGAAGTTGGCAGCACCAACACTGATGAGC...GGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCAGTGGTTTTCTCTCCTaGCCCTCCCACCGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSSGFLS*PSHRPS
Trigger: GGAGGGGCGGTGGGAGGGGCAGGAGAGAAAACCACT...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp TCAGTGCTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGCCCCGCTCTCTGAGAATCGCCTCTGGCCCCTaGTATGATGGTGAACACTGG +
Preference number: 4 (lower is better)
Translates to: SVLSQSESSELGGPRSLRIASGP*YDGEHW
Trigger: CCAGTGTTCACCATCATACCAGGGGCCAGAGGCGAT...TCTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAAAGCCACTGCCACTCTaGCACTGCAGTCGCACCTCG +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPKPLPL*HCSRTS
Trigger: CGAGGTGCGACTGCAGTGCCAGAGTGGCAGTGGCTT...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGCCCCACACCTTCACCAGGCCCTACTGGAGGAGGTGGTTCCCCTTTGGCTCCCTTGCTATTCCAGCACTaGCGAAGCAGGATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SPTPSPGPTGGGGSPLAPLLFQH*RSRILK
Trigger: TTTCAAGATCCTGCTTCGCCAGTGCTGGAATAGCAA...GGGAGCCAAAGGGGAACCACCTCCTCCAGTAGGGCCTGGTGAAGGTGTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATAGCTCCCCTTGGCGCTaGCCTTGCGGTGACGGGTCT +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHSSPWR*PCGDGS
Trigger: AGACCCGTCACCGCAAGGCCAGCGCCAAGGGGAGCT...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCCCCCACAGCTCCCCTTaGCGCTGGCCTTGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPPHSSP*RWPCGD
Trigger: GTCACCGCAAGGCCAGCGCCAAGGGGAGCTGTGGGG...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
57% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTGCCCCCTGGGCTTCCTaGTCCTCCAGGTTCATGGGG +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSAPWAS*SSRFMG
Trigger: CCCCATGAACCTGGAGGACCAGGAAGCCCAGGGGGC...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCGTGAATCTGGGCTGGTaGAGCCAGGGGCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSVNLGW*SQGLSP
Trigger: AGGGCTCAGCCCCTGGCTCCACCAGCCCAGATTCAC...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAGTACAGCAGTGCAGCTaGGGTCAAGTGCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPVQQCS*GQVLGP
Trigger: GGGTCCCAGCACTTGACCCCAGCTGCACTGCTGTAC...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCAGCCTGACTTACGGCTaGGACAGCCCCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SHAISLLTSPWALRQGLGSLTYG*DSPIFL
Trigger: CAGAAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCT...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGCCCAGAGGCACAGACTaGGGTGCTGGGTTCACAGTA +
Preference number: 4 (lower is better)
Translates to: KACSRLSSSLSLSSSCNMPRGTD*GAGFTV
Trigger: TACTGTGAACCCAGCACCCCAGTCTGTGCCTCTGGG...CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CAA 72 bp ATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTaGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: MSSDRSSGRSSV*VLPTSGVPLGE
Trigger: TTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGGGGCGCAGAACTCCATaGGGATGCAGTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRGRRTP*GCSSRE
Trigger: CTCCCTGCTACTGCATCCTCATGGAGTTCTGCGCCC...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGCCAGTAAGGAGGGGGTaGCAGGGCGGCCAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVPVRRG*QGGQPA
Trigger: TGCGGGCTGGCCGCCCTGTCACCCCCTCCTTACTGG...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp GGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCCCACATCGTCGTAGGTaGTTAGCATGTTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: GAHVIRPLIWPLISVGAAPHRRR*LACWVT
Trigger: AGTCACCCAACATGCTAATCACCTACGACGATGTGG...GGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCGGAGAGTACATCAGCTaGGGCAATGTCCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SHAISLLTSPWALRQGLGGEYIS*GNVQMQ
Trigger: CTGCATCTGGACATTGCCTCAGCTGATGTACTCTCC...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ATGAAGACATTTTGCGGAGCAGGAGGTCATGATGAAGCCCACGGAGGGCGGGAGGGAGAGTACATCAGCTaGGGCAATGTCCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: MKTFCGAGGHDEAHGGREGEYIS*GNVQMQ
Trigger: CTGCATCTGGACATTGCCTCAGCTGATGTACTCTCC...CTCCCGCCCTCCGTGGGCTTCATCATGACCTCCTGCTCCGCAAAATGTCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATTGTCCAGGGCGTGTCTaGGCTCCTCCCTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHCPGRV*APPSSS
Trigger: TGAGGAGGAGGGAGGAGCTCAGACACGCCCTGGACA...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp AAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGCAGGTCTGGGGACGATaGAGACATTTTGCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: KACSRLSSSLSLSSSCNMQVWGR*RHFAEQ
Trigger: CTGCTCCGCAAAATGTCTTCATCGTCCCCAGACCTG...CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTACCGGGCCGGAGGTGGTaGGCCAGGATCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLPGRRW*ARIPSS
Trigger: GGAGCTGGGGATCCTGGCTCACCACCTCCGGCCCGG...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp AGTTCCAGCTGCAACATGAGGGCATTAAGTTCCATATACAGGTTGTTGGCTCTCGGTGGAGCCAGGGGCTaGGCCCTCACTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SSSCNMRALSSIYRLLALGGARG*ALTWWG
Trigger: ACCCCACCAAGTGAGGGCTCAGCCCCTGGCTCCACC...GAGAGCCAACAACCTGTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp TGTCTACCTCTCCTTCCTCCTCTTCCGATGAGATGCCACGTTTCTGACTTCGGGCGCATGTTCAGGCTCTaGGGCCACCTCTGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: CLPLLPPLPMRCHVSDFGRMFRL*GHLWLD
Trigger: ATCAAGCCAGAGGTGGCCTCAGAGCCTGAACATGCG...CCCGAAGTCAGAAACGTGGCATCTCATCGGAAGAGGAGGAAGGAGAGGTAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGGAGGGCCCCGCTCTCTaGGAAGTTCCTGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKREGPAL*EVPGVE
Trigger: TTCCACACCAGGAACTTCTCAGAGAGCGGGGCCCTC...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCGGGCCCCCTGCATCCTaGTCATGTAGCTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSGPPAS*SCSCRT
Trigger: TGTCCTGCAGCTACATGAGCAGGATGCAGGGGGCCC...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCCTGCCACTCTGGCACTaGAGTCGCACCTCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSLPLWH*SRTSSA
Trigger: AGCTGACGAGGTGCGACTGCAGTGCCAGAGTGGCAG...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTCAGTGGAGTAGGCTTTaGCAATCATGGTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFQWSRL*QSWSRQ
Trigger: CTGTCTGGACCATGATTGGCAAAGCCTACTCCACTG...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCTCCCAAAGGTCTTCCTaGTGCTGCTTGTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SHAISLLTSPWALRQGLGSQRSS*CCLCSV
Trigger: CACTGAGCACAAGCAGCAGCAGGAAGACCTTTGGGA...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGAGGGCGAGGCAATGTCCAGATaGAGCAGGATCTGTCGGAAT +
Preference number: 4 (lower is better)
Translates to: LLSPEQLPLLEFQLQHEGEAMSR*SRICRN
Trigger: ATTCCGACAGATCCTGCTGCATCTGGACATTGCCTC...GCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp AGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCAATCCTCTTCTAGGCGGTaGAGACAGGTCCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: STCHQTAHLAAHQCWCCQSSSRR*RQVPSD
Trigger: GTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGA...TTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp ATCACCAGTTCCTCTTCTAGGCGGTGCAGACAGGTCCCTTCTGACTTAATCTTTCCTTGGCGCTGGCCTTaGGGTGACGGGTCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: ITSSSSRRCRQVPSDLIFPWRWP*GDGSCH
Trigger: GTGGCAAGACCCGTCACCGCAAGGCCAGCGCCAAGG...AAAGATTAAGTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGAACTGGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCGCAGCTGGGGTCAAGTaGTGGGACCCAGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPAAGVK*WDPARL
Trigger: AAGCCGGGCTGGGTCCCAGCACTTGACCCCAGCTGC...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGAGCCCTGTACAGCAGTaGAGCTGGGGTCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPESPVQQ*SWGQVL
Trigger: CAGCACTTGACCCCAGCTGCACTGCTGTACAGGGCT...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAAGCCCTGTACAGCAGTaGAGCTGGGGTCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPSPVQQ*SWGQVL
Trigger: CAGCACTTGACCCCAGCTGCACTGCTGTACAGGGCT...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp GTGCTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGCCCCGCTCTCTGAGAAGTCCTCTTCCGATGAGATaGCACGTTTCTGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: VLSQSESSELGGPRSLRSPLPMR*HVSDFG
Trigger: CCCGAAGTCAGAAACGTGGCATCTCATCGGAAGAGG...ACTTCTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTACAGCTCTACGGCTGTaGCTCATTCATTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFTALRL*LIHFHS
Trigger: GCTGTGGAAATGAATGAGGCACAGCCGTAGAGCTGT...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATTATGATGGTGAACACTaGGCCCTCGGGGGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHYDGEH*ALGGSA
Trigger: CGCGGAGCCCCCGAGGGCCCAGTGTTCACCATCATA...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGCTTCTCCATTGTGTTTCCATGCAGGAGGCCCCGGGAAGGGTGTGGCTTCAGCGCTGCTTGTGCTCAGTaGAGTAGGCTTTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: SFSIVFPCRRPREGCGFSAACAQ*SRLCQS
Trigger: TGATTGGCAAAGCCTACTCCACTGAGCACAAGCAGC...GCTGAAGCCACACCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGTCATACAGCTGGCCCTaGGCGCAGAACTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPESYSWP*AQNSMR
Trigger: CCTCATGGAGTTCTGCGCCCAGGGCCAGCTGTATGA...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGAACCATCTGGGCAACTaGAGGGCACGGGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPENHLGN*RARADG
Trigger: TCCATCTGCCCGTGCCCTCCAGTTGCCCAGATGGTT...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp GCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGTCTGGGTCCTCCAGGTTCATaGGGTGGCACAGCTGTACGA +
Preference number: 4 (lower is better)
Translates to: AARHQRCWSCPIQCCHSLGPPGS*GGTAVR
Trigger: TCGTACAGCTGTGCCACCCCATGAACCTGGAGGACC...CAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGGTACAGCAGTGCAGCTaGGGTCAAGTGCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRVQQCS*GQVLGP
Trigger: GGGTCCCAGCACTTGACCCCAGCTGCACTGCTGTAC...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp GGGTCCAGTGGGATTTCTGAGCCCTGGGAGCACATGTCATCAGACCGCTCATCTGGGATTTCTGAGCCCTaGGAGCACATGTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: GSSGISEPWEHMSSDRSSGISEP*EHMSSD
Trigger: GTCTGATGACATGTGCTCCCAGGGCTCAGAAATCCC...AGATGAGCGGTCTGATGACATGTGCTCCCAGGGCTCAGAAATCCCACTGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGGCTGCAGGACACTGTTaGCAAAAGGCTCAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRAAGHC*QKAQGA
Trigger: CGCCCCCTGAGCCTTTTGCCAACAGTGTCCTGCAGC...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547488.6
3UTR CAA 72 bp GAAGCTGGGGGCCGCAAGGCATCAACGCTGTTGGAGTaGTCCAATTCAGTGCTGTCACAGTCTGAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EAGGRKASTLLE*SNSVLSQSESS
Trigger: TGAGGACTCAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGCCAGTAAGGAGGGGGTaGCAGGGCGGCCAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQPVRRG*QGGQPA
Trigger: TGCGGGCTGGCCGCCCTGTCACCCCCTCCTTACTGG...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCCCACATCGTCGTAGGTaGTTAGCATGTTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: SHAISLLTSPWALRQGLGPHRRR*LACWVT
Trigger: AGTCACCCAACATGCTAATCACCTACGACGATGTGG...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp AGCTTCTCCATTGTGTTTCCATGCAGGAGGCCCCGGGAAGGGTGTGGCTTCAGCGGAAGTGCCAAAATCTaGGATCTTCACCACATCGTC +
Preference number: 4 (lower is better)
Translates to: SFSIVFPCRRPREGCGFSGSAKI*DLHHIV
Trigger: GACGATGTGGTGAAGATCTCAGATTTTGGCACTTCC...GCTGAAGCCACACCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGGTTTCTGACTTCGGGTaGCGGCAGCCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRVSDFG*RQPCTA
Trigger: TGCTGTACAGGGCTGCCGTCACCCGAAGTCAGAAAC...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCCGCATGTTCAGGCTCTaGGGCCACCTCTGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSRMFRL*GHLWLD
Trigger: ATCAAGCCAGAGGTGGCCTCAGAGCCTGAACATGCG...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCGCCAGGGATGACCTCTaGAGGAGGTGGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPARDDL*RRWVQW
Trigger: CCACTGGACCCACCTCCTTCAGAGGTCATCCCTGGC...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTGTTCAGGGCCAGGGATaGCCTCTGAAGGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSVQGQG*PLKEVG
Trigger: ACCCACCTCCTTCAGAGGTCATCCCTGGCCCTGAAC...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCAAAAGGCGGCGCTGCTaGAGCTCCGCTCCGGATGCT +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPKRRRC*SSAPDA
Trigger: AGCATCCGGAGCGGAGCTGCAGCAGCGCCGCCTTTT...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267079.6
CDS-3UTR GCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCGAGGCAATGTCCAGATaGAGCAGGATCTGTCGGAAT +
Preference number: 4 (lower is better)
Translates to: SHAISLLTSPWALRQGLGEAMSR*SRICRN
Trigger: ATTCCGACAGATCCTGCTGCATCTGGACATTGCCTC...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCTCCATTGTGTTTCCATaGAGGAGGCCCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSSIVFP*RRPREG
Trigger: CCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGA...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGATCGCCTCTGGCCCCTaGTATGATGGTGAACACTGG +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPEIASGP*YDGEHW
Trigger: CCAGTGTTCACCATCATACCAGGGGCCAGAGGCGAT...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAGCAGTCAGAAGTGTCTaGGTCCAGCTTGCGCATGGA +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPAVRSV*VQLAHG
Trigger: TCCATGCGCAAGCTGGACCCAGACACTTCTGACTGC...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp TGTCTACCTCTCCTTCCTCCTCTTCCGATGAGATGCCACGTTTCTGACTTCGGGTGTAGCTGCAGGACATaGGTAGGCGTCAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: CLPLLPPLPMRCHVSDFGCSCRT*VGVRSF
Trigger: GAAGGACCTGACGCCTACCCATGTCCTGCAGCTACA...CCCGAAGTCAGAAACGTGGCATCTCATCGGAAGAGGAGGAAGGAGAGGTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCCGTCAGCTCGAACTCTaGATGCCCGACTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSRQLEL*MPDSQV
Trigger: CACCTGAGAGTCGGGCATCCAGAGTTCGAGCTGACG...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGCTTCTCCATTGTGTTTCCATGCAGGAGGCCCCGGGAAGGGTGTGGCTTCAGCGACTTGAGATCCCTGTaGATAATCTTGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SFSIVFPCRRPREGCGFSDLRSL*IILCRC
Trigger: GCACCTGCACAAGATTATCCACAGGGATCTCAAGTC...GCTGAAGCCACACCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGTTCACCAGGCCCTACTaGAGGAGGTGGTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPEFTRPY*RRWFPF
Trigger: AAAGGGGAACCACCTCCTCCAGTAGGGCCTGGTGAA...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCACCACTAGGGAGGGGGTaGGGGAAAGGAATGACACAT +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPPLGRG*GKGMTH
Trigger: ATGTGTCATTCCTTTCCCCCACCCCCTCCCTAGTGG...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATGTTTCTGACTTCGGGTaGCGGCAGCCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHVSDFG*RQPCTA
Trigger: TGCTGTACAGGGCTGCCGTCACCCGAAGTCAGAAAC...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ATCACCAGTTCCTCTTCTAGGCGGTGCAGACAGGTCCCTTCTGACTTAATCTTTGAGGGCCCCGCTCTCTaGGAAGTTCCTGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: ITSSSSRRCRQVPSDLIFEGPAL*EVPGVE
Trigger: TTCCACACCAGGAACTTCTCAGAGAGCGGGGCCCTC...AAAGATTAAGTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGAACTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAAGTTACATTGCCACCTaGGAAACCTCAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPSYIAT*ETSEGR
Trigger: CCTCCCCTCTGAGGTTTCTCAGGTGGCAATGTAACT...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp GGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCCTCCAAATTGCACCTTaGGCCATCTTAGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: GAHVIRPLIWPLISVGAALQIAP*AILGNL
Trigger: CAGATTTCCTAAGATGGCTCAAGGTGCAATTTGGAG...GGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCTGGCCTTTTGCTATGGGGTGACAGCTTCTGTGGCACATTCCTCTTCTTGATAGGGCCCCCTGCATCCTaGTCATGTAGCTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: SGLLLWGDSFCGTFLFLIGPPAS*SCSCRT
Trigger: TGTCCTGCAGCTACATGAGCAGGATGCAGGGGGCCC...TATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGTCCCAAAGGTCTTCCTaGTGCTGCTTGTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPESQRSS*CCLCSV
Trigger: CACTGAGCACAAGCAGCAGCAGGAAGACCTTTGGGA...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGGTGATGATGTTGGGGTaGTTCAGCTTTCGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: KACSRLSSSLSLSSSCNMVMMLG*FSFRKC
Trigger: GCACTTGCGAAAGCTGAAGCACCCCAACATCATCAC...CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCTCATGCCACCAGCGATaGCCATGGACCAGTCAACCA +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSSCHQR*PWTSQP
Trigger: TGGTTGACTGGTCCATGGGCATCGCTGGTGGCATGA...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTGGTGCAGGTAGTTCATaGCACCAGCGATGCCCATGG +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSGAGSS*HQRCPW
Trigger: CCATGGGCATCGCTGGTGGCATGAACTACCTGCACC...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TGGGGGCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGGCGATTTCGTGGTTTaGTATTCCAGCACTGGCGAA +
Preference number: 4 (lower is better)
Translates to: WGPQGINAVGVVQFSAVTGDFVV*YSSTGE
Trigger: TTCGCCAGTGCTGGAATAGCAAACCACGAAATCGCC...TGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCAGTGCTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGCCCCGCTCTCTGAGAGGATATCTGGCCTTTTaGTATGGGGTGACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SVLSQSESSELGGPRSLRGYLAF*YGVTAS
Trigger: AGAAGCTGTCACCCCATAGCAAAAGGCCAGATATCC...TCTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGTGCGGTGACGGGTCTTaGCACGGCGACTCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVCGDGS*HGDSVL
Trigger: CAGGACGGAGTCGCCGTGGCAAGACCCGTCACCGCA...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGGCTCATCAGTGTTGGTaGTGCCAACTTCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPEAHQCW*CQLQVC
Trigger: GCACACCTGAAGTTGGCAGCACCAACACTGATGAGC...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAAGTTGTCCAATTCAGTaGTGTCACAGTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SGRSSVLVLPTSGVPLGESCPIQ*CHSLSP
Trigger: AGGACTCAGACTGTGACAGCACTGAATTGGACAACT...TTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGGCCACCTCCTCCCCGTaGAAGCGCCCCAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGATSSP*KRPRKT
Trigger: TGTCTTCCTGGGGCGCTTCCACGGGGAGGAGGTGGC...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTAGTACCTCATACAGCTaGCCCTGGGCGCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSSTSYS*PWAQNS
Trigger: GGAGTTCTGCGCCCAGGGCCAGCTGTATGAGGTACT...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTGAGGGCACGGGCAGATaGAGACTGTTGCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSEGTGR*RLLLPT
Trigger: TGTGGGAAGCAACAGTCTCCATCTGCCCGTGCCCTC...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGAAGTCTCCTGGGGTGTaGAGAGTACATCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPEKSPGV*RVHQLR
Trigger: CCTCAGCTGATGTACTCTCCACACCCCAGGAGACTT...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATGAGGTGGTTCCCCTTTaGCTCCCCCAGGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHEVVPL*LPQVNL
Trigger: CAGATTCACCTGGGGGAGCCAAAGGGGAACCACCTC...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGGCTGGGGTCAAGTGCTaGGACCCAGCCCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGAGVKC*DPARLP
Trigger: AGGAAGCCGGGCTGGGTCCCAGCACTTGACCCCAGC...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAATCAGACCGCTCATCTaGCCGCTCATCAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPIRPLI*PLISVG
Trigger: ACCAACACTGATGAGCGGCCAGATGAGCGGTCTGAT...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp TCAGTGCTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGCCCCGCTCTCTGAGAAGGCATCAACGCTGTTaGAGTTGTCCAATTCAGTGC +
Preference number: 4 (lower is better)
Translates to: SVLSQSESSELGGPRSLRRHQRC*SCPIQC
Trigger: GCACTGAATTGGACAACTCCAACAGCGTTGATGCCT...TCTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp ATCACCAGTTCCTCTTCTAGGCGGTGCAGACAGGTCCCTTCTGACTTAATCTTTCACAGACTGGGGTGCTaGGTTCACAGTAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: ITSSSSRRCRQVPSDLIFHRLGC*VHSSPA
Trigger: AGCGGGGCTACTGTGAACCCAGCACCCCAGTCTGTG...AAAGATTAAGTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGAACTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
3UTR CAA 72 bp TCTAAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTaGAGTTCCAGCTGCAACATGAGGGCATTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SKACSRLSSSLS*SSSCNMRALSS
Trigger: GGAACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCACATCGTCGTAGGTaGTTAGCATGTTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPEPHRRR*LACWVT
Trigger: AGTCACCCAACATGCTAATCACCTACGACGATGTGG...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTGGCGAAGCAGGATCTTaGAACCATCTGGGCAACTGG +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSGEAGS*NHLGNW
Trigger: CCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCC...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp TGTCTACCTCTCCTTCCTCCTCTTCCGATGAGATGCCACGTTTCTGACTTCGGGCCTTTTGCTATGGGGTaGCAGCTTCTGTGGCACATT +
Preference number: 4 (lower is better)
Translates to: CLPLLPPLPMRCHVSDFGPFAMG*QLLWHI
Trigger: AATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGG...CCCGAAGTCAGAAACGTGGCATCTCATCGGAAGAGGAGGAAGGAGAGGTAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGAGTTACATTGCCACCTaGGAAACCTCAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRSYIAT*ETSEGR
Trigger: CCTCCCCTCTGAGGTTTCTCAGGTGGCAATGTAACT...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGGATCCTATTTTTCCCTaGCTCCATGCTTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPEDPIFP*LHAWLA
Trigger: GGCCAACCAAGCATGGAGTCAGGGAAAAATAGGATC...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATGGTCCTTCTCGGGAGTaGAGTCAGAAGTGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHGPSRE*SQKCLG
Trigger: ACCCAGACACTTCTGACTGCACTCCCGAGAAGGACC...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCTGGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAATTCAGCTTTCGCAAGTaGTTGATGTCGGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SGRSSVLVLPTSGVPLGEFSFRK*LMSVSL
Trigger: CAAAGAAACCGACATCAAGCACTTGCGAAAGCTGAA...TTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATTCATGCCACCAGCGATaGCCATGGACCAGTCAACCA +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHSCHQR*PWTSQP
Trigger: TGGTTGACTGGTCCATGGGCATCGCTGGTGGCATGA...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCTGGCCTTTTGCTATGGGGTGACAGCTTCTGTGGCACATTCCTCTTCTTGATAGGTGCAGGTAGTTCATaGCACCAGCGATGCCCATGG +
Preference number: 4 (lower is better)
Translates to: SGLLLWGDSFCGTFLFLIGAGSS*HQRCPW
Trigger: CCATGGGCATCGCTGGTGGCATGAACTACCTGCACC...TATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATTCCTCTTCTAGGCGGTaGAGACAGGTCCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHSSSRR*RQVPSD
Trigger: GTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGA...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCCTCCGCTCTAAAGCTTaGTCTCGCCTGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPLRSKA*SRLSSS
Trigger: GGAGCTGCTCAGGCGAGAGCAAGCTTTAGAGCGGAG...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCTCCATTGTGTTTCCATaGAGGAGGCCCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPSIVFP*RRPREG
Trigger: CCCTTCCCGGGGCCTCCTGCATGGAAACACAATGGA...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTACCTTGGCGCTGGCCTTaGGGTGACGGGTCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLPWRWP*GDGSCH
Trigger: GTGGCAAGACCCGTCACCGCAAGGCCAGCGCCAAGG...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCAGTGCTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGCCCCGCTCTCTGAGAACGATGAAGACATTTTaGGGAGCAGGAGGTCATGAT +
Preference number: 4 (lower is better)
Translates to: SVLSQSESSELGGPRSLRTMKTF*GAGGHD
Trigger: ATCATGACCTCCTGCTCCGCAAAATGTCTTCATCGT...TCTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCGGTGTTCGGGTCTCATaGAGGCAAGCCATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPGVRVS*RQAIAS
Trigger: AGAGGCGATGGCTTGCCTCCATGAGACCCGAACACC...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCCGTCAGCTCGAACTCTaGATGCCCGACTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPRQLEL*MPDSQV
Trigger: CACCTGAGAGTCGGGCATCCAGAGTTCGAGCTGACG...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCAGGCTTTGCCAATCATaGTCCAGACAGGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPRLCQS*SRQGAG
Trigger: GCCTGCGCCCTGTCTGGACCATGATTGGCAAAGCCT...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ATCACCAGTTCCTCTTCTAGGCGGTGCAGACAGGTCCCTTCTGACTTAATCTTTTCATACAGCTGGCCCTaGGCGCAGAACTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: ITSSSSRRCRQVPSDLIFSYSWP*AQNSMR
Trigger: CCTCATGGAGTTCTGCGCCCAGGGCCAGCTGTATGA...AAAGATTAAGTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGAACTGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCTCCAGGTTCATGGGGTaGCACAGCTGTACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPSRFMG*HSCTKP
Trigger: GGGCTTCGTACAGCTGTGCCACCCCATGAACCTGGA...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCGGTCCTCCAGGTTCATaGGGTGGCACAGCTGTACGA +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPGPPGS*GGTAVR
Trigger: TCGTACAGCTGTGCCACCCCATGAACCTGGAGGACC...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGCAGGTGAATCTGGGCTaGTGGAGCCAGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVQVNLG*WSQGLS
Trigger: GCTCAGCCCCTGGCTCCACCAGCCCAGATTCACCTG...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCGAGGTGGTTCCCCTTTaGCTCCCCCAGGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPEVVPL*LPQVNL
Trigger: CAGATTCACCTGGGGGAGCCAAAGGGGAACCACCTC...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGTCTCTGAGAAGTTCCTaGTGTGGAATGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRSLRSS*CGMGRE
Trigger: CTCCCTGCCCATTCCACACCAGGAACTTCTCAGAGA...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTAGCCTGACTTACGGCTaGGACAGCCCCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSSLTYG*DSPIFL
Trigger: CAGAAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCT...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGTCTCGAAGTACACACTaGGTAGGCGTCAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRSRSTH*VGVRSF
Trigger: GAAGGACCTGACGCCTACCCAGTGTGTACTTCGAGA...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547488.6
CDS-3UTR CCA 90 bp AAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGGGTAACAGCCCCACGTaGGTACACACTGGTAAAATA +
Preference number: 4 (lower is better)
Translates to: KACSRLSSSLSLSSSCNMGNSPT*VHTGKI
Trigger: TATTTTACCAGTGTGTACCCACGTGGGGCTGTTACC...CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGGGGCGCAGAACTCCATaGGGATGCAGTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGGRRTP*GCSSRE
Trigger: CTCCCTGCTACTGCATCCTCATGGAGTTCTGCGCCC...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCCAGGATCTGTCGGAATaGTGGGCGATTTCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSQDLSE*WAISWF
Trigger: AAACCACGAAATCGCCCATCATTCCGACAGATCCTG...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp GTGCTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGCCCCGCTCTCTGAGAAGTCAGACAGGTCCCTTCTaGCTTAATCTTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: VLSQSESSELGGPRSLRSQTGPF*LNLFKV
Trigger: CACTTTGAAAAGATTAAGTCAGAAGGGACCTGTCTG...ACTTCTCAGAGAGCGGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp AAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGCTTCTCCCTGTAAGATaGCTAATTCATTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KACSRLSSSLSLSSSCNMLLPVR*LIHCCS
Trigger: GCTGCAGCAATGAATTAGTCATCTTACAGGGAGAAG...CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTACACAAAAGGCGGCGCTaGTGCAGCTCCGCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLHKRRR*CSSAPD
Trigger: ATCCGGAGCGGAGCTGCAGCAGCGCCGCCTTTTGTG...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267079.6
CDS-3UTR GCA 90 bp TCTGGCCTTTTGCTATGGGGTGACAGCTTCTGTGGCACATTCCTCTTCTTGATATCCTGCTCATGTAGCTaGAGGACATGGGTAGGCGTC +
Preference number: 4 (lower is better)
Translates to: SGLLLWGDSFCGTFLFLISCSCS*RTWVGV
Trigger: GACGCCTACCCATGTCCTGCAGCTACATGAGCAGGA...TATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCTTCAGCTTTCGCAAGTaGTTGATGTCGGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SHAISLLTSPWALRQGLGFSFRK*LMSVSL
Trigger: CAAAGAAACCGACATCAAGCACTTGCGAAAGCTGAA...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCGGCGATTTCGTGGTTTaGTATTCCAGCACTGGCGAA +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSGDFVV*YSSTGE
Trigger: TTCGCCAGTGCTGGAATAGCAAACCACGAAATCGCC...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCTCCTCTTCTAGGCGGTaGAGACAGGTCCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPSSSRR*RQVPSD
Trigger: GTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGA...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGTCCTTGAGTTCCAGCTaGAACATGAGGGCATTAAGT +
Preference number: 4 (lower is better)
Translates to: KACSRLSSSLSLSSSCNMSLSSS*NMRALS
Trigger: ACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGA...CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCTCTTCCGATGAGATaGCACGTTTCTGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSPLPMR*HVSDFG
Trigger: CCCGAAGTCAGAAACGTGGCATCTCATCGGAAGAGG...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGAAGCCACTGCCACTCTaGCACTGCAGTCGCACCTCG +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGKPLPL*HCSRTS
Trigger: CGAGGTGCGACTGCAGTGCCAGAGTGGCAGTGGCTT...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGGCTGCTTGTGCTCAGTaGAGTAGGCTTTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRAACAQ*SRLCQS
Trigger: TGATTGGCAAAGCCTACTCCACTGAGCACAAGCAGC...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCACTGCAAAGGACATCTTaGTGCTCTTGTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPLQRTS*CSCHSA
Trigger: AGCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAG...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ATCACCAGTTCCTCTTCTAGGCGGTGCAGACAGGTCCCTTCTGACTTAATCTTTGATCTTGAAACCATCTaGGCAACTGGAGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: ITSSSSRRCRQVPSDLIFDLETI*ATGGHG
Trigger: CCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATC...AAAGATTAAGTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGAACTGGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGGTGAATCTGGGCTGGTaGAGCCAGGGGCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQVNLGW*SQGLSP
Trigger: AGGGCTCAGCCCCTGGCTCCACCAGCCCAGATTCAC...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGTTCCAGCTGCAACATGAGGGCATTAAGTTCCATATACAGGTTGTTGGCTCTCGAGGTGGTTCCCCTTTaGCTCCCCCAGGTGAATCTG +
Preference number: 4 (lower is better)
Translates to: SSSCNMRALSSIYRLLALEVVPL*LPQVNL
Trigger: CAGATTCACCTGGGGGAGCCAAAGGGGAACCACCTC...GAGAGCCAACAACCTGTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTACCCTACTGGAGGAGGTaGTTCCCCTTTGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLPYWRR*FPFGSP
Trigger: GGGGGAGCCAAAGGGGAACCACCTCCTCCAGTAGGG...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTGGGATTTCTGAGCCCTaGGAGCACATGTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSGISEP*EHMSSD
Trigger: GTCTGATGACATGTGCTCCCAGGGCTCAGAAATCCC...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAAGGCATCAACGCTGTTaGAGTTGTCCAATTCAGTGC +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPRHQRC*SCPIQC
Trigger: GCACTGAATTGGACAACTCCAACAGCGTTGATGCCT...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCCCACTAGGGAGGGGGTaGGGGAAAGGAATGACACAT +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPPLGRG*GKGMTH
Trigger: ATGTGTCATTCCTTTCCCCCACCCCCTCCCTAGTGG...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCGGAAGTGCCAAAATCTaGGATCTTCACCACATCGTC +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSGSAKI*DLHHIV
Trigger: GACGATGTGGTGAAGATCTCAGATTTTGGCACTTCC...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTTTCCTCCTCTTCCGATaGGATGCCACGTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSFLLFR*DATFLT
Trigger: AGTCAGAAACGTGGCATCTCATCGGAAGAGGAGGAA...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGGAGGGCCCCGCTCTCTaGGAAGTTCCTGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQEGPAL*EVPGVE
Trigger: TTCCACACCAGGAACTTCTCAGAGAGCGGGGCCCTC...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ATCACCAGTTCCTCTTCTAGGCGGTGCAGACAGGTCCCTTCTGACTTAATCTTTTGTCTGGGTCCAGCTTaGGCATGGATGCCTCACTTA +
Preference number: 4 (lower is better)
Translates to: ITSSSSRRCRQVPSDLIFCLGPA*AWMPHL
Trigger: TAAGTGAGGCATCCATGCGCAAGCTGGACCCAGACA...AAAGATTAAGTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGAACTGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATCAGTGGAGTAGGCTTTaGCAATCATGGTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHQWSRL*QSWSRQ
Trigger: CTGTCTGGACCATGATTGGCAAAGCCTACTCCACTG...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATGTGATGATGTTGGGGTaGTTCAGCTTTCGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHVMMLG*FSFRKC
Trigger: GCACTTGCGAAAGCTGAAGCACCCCAACATCATCAC...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATGGCGATTTCGTGGTTTaGTATTCCAGCACTGGCGAA +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHGDFVV*YSSTGE
Trigger: TTCGCCAGTGCTGGAATAGCAAACCACGAAATCGCC...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATGAGGCAATGTCCAGATaGAGCAGGATCTGTCGGAAT +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHEAMSR*SRICRN
Trigger: ATTCCGACAGATCCTGCTGCATCTGGACATTGCCTC...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCTTCTTCCCGCCACTCTaGCTGGGACTTAAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSFFPPL*LGLKVS
Trigger: ACTTACTTTAAGTCCCAGGCAGAGTGGCGGGAAGAA...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGGGATATCTGGCCTTTTaGTATGGGGTGACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRGYLAF*YGVTAS
Trigger: AGAAGCTGTCACCCCATAGCAAAAGGCCAGATATCC...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCGGATATCTGGCCTTTTaGTATGGGGTGACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSGYLAF*YGVTAS
Trigger: AGAAGCTGTCACCCCATAGCAAAAGGCCAGATATCC...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCCATCAGTGTTGGTGCTaGCAACTTCAGGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPHQCWC*QLQVCH
Trigger: GTGGCACACCTGAAGTTGGCAGCACCAACACTGATG...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTACAGCTCTACGGCTGTaGCTCATTCATTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSTALRL*LIHFHS
Trigger: GCTGTGGAAATGAATGAGGCACAGCCGTAGAGCTGT...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCTCCTGCTCATGTAGCTaGAGGACACTGTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSSCSCS*RTLLAK
Trigger: TTTTGCCAACAGTGTCCTGCAGCTACATGAGCAGGA...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTGCTGCTTGTGCTCAGTaGAGTAGGCTTTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSAACAQ*SRLCQS
Trigger: TGATTGGCAAAGCCTACTCCACTGAGCACAAGCAGC...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGAGTACCTCATACAGCTaGCCCTGGGCGCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGSTSYS*PWAQNS
Trigger: GGAGTTCTGCGCCCAGGGCCAGCTGTATGAGGTACT...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGGAGGGCACGGGCAGATaGAGACTGTTGCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGEGTGR*RLLLPT
Trigger: TGTGGGAAGCAACAGTCTCCATCTGCCCGTGCCCTC...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCATCAGACCGCTCATCTaGCCGCTCATCAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPIRPLI*PLISVG
Trigger: ACCAACACTGATGAGCGGCCAGATGAGCGGTCTGAT...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGGTTCCTGGTGTGGAATaGGCAGGGAGCTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVVPGVE*AGSWVQ
Trigger: CTGAACCCAGCTCCCTGCCCATTCCACACCAGGAAC...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGGTTTATCAGGTGAATTaGTCAGGGGATCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRVYQVN*SGDQSP
Trigger: GGGAGACTGATCCCCTGACCAATTCACCTGATAAAC...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGCTCCTAACCTCCCCCTaGGCCTTAAGACAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGLLTSP*ALRQGL
Trigger: CAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAG...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAACAGCTGGGCCTGCATaGAGTGTTATATTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPTAGPA*SVIFQG
Trigger: ACCTTGAAATATAACACTCCATGCAGGCCCAGCTGT...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGAAAACCCTCAACAGCTaGGCCTGCATGGAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRKTLNS*ACMECY
Trigger: ATAACACTCCATGCAGGCCCAGCTGTTGAGGGTTTT...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATGGAAGTGCCAAAATCTaGGATCTTCACCACATCGTC +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHGSAKI*DLHHIV
Trigger: GACGATGTGGTGAAGATCTCAGATTTTGGCACTTCC...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp TCTGGCCTTTTGCTATGGGGTGACAGCTTCTGTGGCACATTCCTCTTCTTGATACAGGATCTGTCGGAATaGTGGGCGATTTCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: SGLLLWGDSFCGTFLFLIQDLSE*WAISWF
Trigger: AAACCACGAAATCGCCCATCATTCCGACAGATCCTG...TATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCACAGACAGGTCCCTTCTaGCTTAATCTTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPQTGPF*LNLFKV
Trigger: CACTTTGAAAAGATTAAGTCAGAAGGGACCTGTCTG...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCCCTTTTGCTATGGGGTaGCAGCTTCTGTGGCACATT +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPPFAMG*QLLWHI
Trigger: AATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGG...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCTTCCTCCTCTTCCGATaGGATGCCACGTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPFLLFR*DATFLT
Trigger: AGTCAGAAACGTGGCATCTCATCGGAAGAGGAGGAA...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ATCACCAGTTCCTCTTCTAGGCGGTGCAGACAGGTCCCTTCTGACTTAATCTTTTTCCTCCTCTTCCGATaGGATGCCACGTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: ITSSSSRRCRQVPSDLIFFLLFR*DATFLT
Trigger: AGTCAGAAACGTGGCATCTCATCGGAAGAGGAGGAA...AAAGATTAAGTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGAACTGGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGCCCGGTTCTTCAGCCTaGGCCATCACATGCTATCAG +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVPGSSA*AITCYQ
Trigger: CTGATAGCATGTGATGGCTCAGGCTGAAGAACCGGG...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGACCCTTCTTGGGTTTTaGATGGAAGCCTTTATTCCG +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRTLLGF*MEAFIP
Trigger: CGGAATAAAGGCTTCCATTCAAAACCCAAGAAGGGT...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGTCAGCTCCTTGGAAGTaGCAAAATCTGAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPESAPWK*QNLRSS
Trigger: TGAAGATCTCAGATTTTGGCACTTCCAAGGAGCTGA...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCATTTTCCCTGACTCCATaGTTGGTTGGCCCTTATAAA +
Preference number: 4 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPFSLTP*LVGPYK
Trigger: TTTATAAGGGCCAACCAAGCATGGAGTCAGGGAAAA...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGATCGCCTCTGGCCCCTaGTATGATGGTGAACACTGG +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVIASGP*YDGEHW
Trigger: CCAGTGTTCACCATCATACCAGGGGCCAGAGGCGAT...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGGCAGTCAGAAGTGTCTaGGTCCAGCTTGCGCATGGA +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVAVRSV*VQLAHG
Trigger: TCCATGCGCAAGCTGGACCCAGACACTTCTGACTGC...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGTGTAGCTGCAGGACATaGGTAGGCGTCAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVCSCRT*VGVRSF
Trigger: GAAGGACCTGACGCCTACCCATGTCCTGCAGCTACA...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267079.6
CDS-3UTR CCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATCTGCAAAGGACATCTTaGTGCTCTTGTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHLQRTS*CSCHSA
Trigger: AGCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAG...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGTTGCTATTCCAGCACTaGCGAAGCAGGATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRLLFQH*RSRILK
Trigger: TTTCAAGATCCTGCTTCGCCAGTGCTGGAATAGCAA...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTGCCCCGGGAAGGGTGTaGCTTCAGCAGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSAPGRV*LQQAWA
Trigger: TGCCCAGGCCTGCTGAAGCCACACCCTTCCCGGGGC...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGTTCCAGCTGCAACATGAGGGCATTAAGTTCCATATACAGGTTGTTGGCTCTCTCTGGCCTTTTGCTATaGGGTGACAGCTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SSSCNMRALSSIYRLLALSGLLL*GDSFCG
Trigger: GCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGA...GAGAGCCAACAACCTGTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGTCCAGGTTCATGGGGTaGCACAGCTGTACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQSRFMG*HSCTKP
Trigger: GGGCTTCGTACAGCTGTGCCACCCCATGAACCTGGA...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGTTCACCAGGCCCTACTaGAGGAGGTGGTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGFTRPY*RRWFPF
Trigger: AAAGGGGAACCACCTCCTCCAGTAGGGCCTGGTGAA...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGGCCGCTCATCAGTGTTaGTGCTGCCAACTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVAAHQC*CCQLQV
Trigger: CACCTGAAGTTGGCAGCACCAACACTGATGAGCGGC...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTAGTTCCTGGTGTGGAATaGGCAGGGAGCTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLVPGVE*AGSWVQ
Trigger: CTGAACCCAGCTCCCTGCCCATTCCACACCAGGAAC...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTGTTTATCAGGTGAATTaGTCAGGGGATCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSVYQVN*SGDQSP
Trigger: GGGAGACTGATCCCCTGACCAATTCACCTGATAAAC...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR CAA 72 bp CTATGGGGTGACAGCTTCTGTGGCACATTCCTCTTCTaGATAAGCTTCTCCATTGTGTTTCCATGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LWGDSFCGTFLF*ISFSIVFPCRR
Trigger: CCTCCTGCATGGAAACACAATGGAGAAGCTTATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR TCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGGGCGAAGCAGGATCTTaGAACCATCTGGGCAACTGG +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQGEAGS*NHLGNW
Trigger: CCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCC...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATTTGTGCCCAAAAGATTaGGGATTAGACTTTCCGAGG +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHLCPKD*GLDFPR
Trigger: CCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAA...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGGGTCCTTCTCGGGAGTaGAGTCAGAAGTGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQGPSRE*SQKCLG
Trigger: ACCCAGACACTTCTGACTGCACTCCCGAGAAGGACC...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTATCCTGCTCATGTAGCTaGAGGACATGGGTAGGCGTC +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLSCSCS*RTWVGV
Trigger: GACGCCTACCCATGTCCTGCAGCTACATGAGCAGGA...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267079.6
CDS-3UTR GCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATTCCTTGAGTTCCAGCTaGAACATGAGGGCATTAAGT +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHSLSSS*NMRALS
Trigger: ACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGA...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGGCTCATCAGTGTTGGTaGTGCCAACTTCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGAHQCW*CQLQVC
Trigger: GCACACCTGAAGTTGGCAGCACCAACACTGATGAGC...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATAGTTGTCCAATTCAGTaGTGTCACAGTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHSCPIQ*CHSLSP
Trigger: AGGACTCAGACTGTGACAGCACTGAATTGGACAACT...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGAACGGAACAGAAAAGTaGAGTCTAAGTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPENGTEK*SLSGFL
Trigger: GAGAAAACCACTTAGACTGCACTTTTCTGTTCCGTT...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTGCCACCTCCTCCCCGTaGAAGCGCCCCAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSATSSP*KRPRKT
Trigger: TGTCTTCCTGGGGCGCTTCCACGGGGAGGAGGTGGC...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp TCTGGCCTTTTGCTATGGGGTGACAGCTTCTGTGGCACATTCCTCTTCTTGATACTGCAAAGGACATCTTaGTGCTCTTGTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: SGLLLWGDSFCGTFLFLILQRTS*CSCHSA
Trigger: AGCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAG...TATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGAAGTCTCCTGGGGTGTaGAGAGTACATCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGKSPGV*RVHQLR
Trigger: CCTCAGCTGATGTACTCTCCACACCCCAGGAGACTT...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGGCCGCTCATCAGTGTTaGTGCTGCCAACTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQAAHQC*CCQLQV
Trigger: CACCTGAAGTTGGCAGCACCAACACTGATGAGCGGC...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGGGGATTTCTGAGCCCTaGGAGCACATGTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGGISEP*EHMSSD
Trigger: GTCTGATGACATGTGCTCCCAGGGCTCAGAAATCCC...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCAAAGTGCAGTCTAAGTaGTTTTCTCTCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPKVQSK*FSLLPL
Trigger: GAGGGGCAGGAGAGAAAACCACTTAGACTGCACTTT...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCGTTTCTTGGGAATGTTaGTCCCCTTGTTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPVSWEC*SPCSGL
Trigger: CAAGCCTGAACAAGGGGACCAACATTCCCAAGAAAC...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGGATCATATGTCTGACTaGGTTCCAGTTTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRDHMSD*VPVSWE
Trigger: TTCCCAAGAAACTGGAACCCAGTCAGACATATGATC...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGCAGGATCTGTCGGAATaGTGGGCGATTTCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVQDLSE*WAISWF
Trigger: AAACCACGAAATCGCCCATCATTCCGACAGATCCTG...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTAGTCTCCCTCGAGCCTaGCTTACGGCTGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSSLPRA*LTAGTA
Trigger: GGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACT...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCGAAAGGAATGACACATaGCATACATGGCATACACAT +
Preference number: 4 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSERNDT*HTWHTH
Trigger: ATGTGTATGCCATGTATGTCATGTGTCATTCCTTTC...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATAACTGGATGCCACAGTaGTTCATGTGGGTTTTATTC +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHNWMPQ*FMWVLF
Trigger: GAATAAAACCCACATGAATCACTGTGGCATCCAGTT...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTATGTCTGGGTCCAGCTTaGGCATGGATGCCTCACTTA +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLCLGPA*AWMPHL
Trigger: TAAGTGAGGCATCCATGCGCAAGCTGGACCCAGACA...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGGTGATGATGTTGGGGTaGTTCAGCTTTCGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGVMMLG*FSFRKC
Trigger: GCACTTGCGAAAGCTGAAGCACCCCAACATCATCAC...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCAATTAATCTTTTCAAAGTaGAGTTTTACTTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: STCHQTAHLAAHQCWCCQLIFSK*SFTSSR
Trigger: GCGGGAAGAAGTAAAACTGCACTTTGAAAAGATTAA...TTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR GCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCTCCTTGAGTTCCAGCTaGAACATGAGGGCATTAAGT +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPSLSSS*NMRALS
Trigger: ACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGA...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGCCTCTTCCGATGAGATaGCACGTTTCTGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQPLPMR*HVSDFG
Trigger: CCCGAAGTCAGAAACGTGGCATCTCATCGGAAGAGG...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGAACGGAACAGAAAAGTaGAGTCTAAGTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRNGTEK*SLSGFL
Trigger: GAGAAAACCACTTAGACTGCACTTTTCTGTTCCGTT...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCCTCCCTCCTCCCAAGTaGAAAATGTGTAAACAGAGT +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPLPPPK*KMCKQS
Trigger: ACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAG...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATTTTTCCCTGACTCCATaGTTGGTTGGCCCTTATAAA +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHFSLTP*LVGPYK
Trigger: TTTATAAGGGCCAACCAAGCATGGAGTCAGGGAAAA...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTATCTGGCCTTTTGCTATaGGGTGACAGCTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLSGLLL*GDSFCG
Trigger: GCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGA...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGTTCTTGGGTTTTGAATaGAAGCCTTTATTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPEFLGFE*KPLFRL
Trigger: TAACCGGAATAAAGGCTTCCATTCAAAACCCAAGAA...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGCCTTTTGCTATGGGGTaGCAGCTTCTGTGGCACATT +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQPFAMG*QLLWHI
Trigger: AATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGG...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCGCCCCATCTTTCTGTTaGTTATGTGGCGCATATATA +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPAPSFC*LCGAYI
Trigger: TATATATGCGCCACATAATCAACAGAAAGATGGGGC...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATGAAAGGAATGACACATaGCATACATGGCATACACAT +
Preference number: 4 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHERNDT*HTWHTH
Trigger: ATGTGTATGCCATGTATGTCATGTGTCATTCCTTTC...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTCTGCCACTCTGGCACTaGAGTCGCACCTCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSLPLWH*SRTSSA
Trigger: AGCTGACGAGGTGCGACTGCAGTGCCAGAGTGGCAG...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGGACTTGAGATCCCTGTaGATAATCTTGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVDLRSL*IILCRC
Trigger: GCACCTGCACAAGATTATCCACAGGGATCTCAAGTC...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGAGGCATCAACGCTGTTaGAGTTGTCCAATTCAGTGC +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGRHQRC*SCPIQC
Trigger: GCACTGAATTGGACAACTCCAACAGCGTTGATGCCT...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGTGGGTTCCAGTTTCTTaGGAATGTTGGTCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVWVPVS*ECWSPC
Trigger: ACAAGGGGACCAACATTCCCAAGAAACTGGAACCCA...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCGATCATATGTCTGACTaGGTTCCAGTTTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPDHMSD*VPVSWE
Trigger: TTCCCAAGAAACTGGAACCCAGTCAGACATATGATC...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTCGCATGTTCAGGCTCTaGGGCCACCTCTGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSRMFRL*GHLWLD
Trigger: ATCAAGCCAGAGGTGGCCTCAGAGCCTGAACATGCG...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGCTAGAGTTTATCAGGTaGATTGGTCAGGGGATCAGT +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGLEFIR*IGQGIS
Trigger: ACTGATCCCCTGACCAATTCACCTGATAAACTCTAG...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTCCTGAGCCCACCCACTaGAGGTCCAGGATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSPEPTH*RSRISS
Trigger: TGAGGAAATCCTGGACCTGCAGTGGGTGGGCTCAGG...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGACGATGAAGACATTTTaGGGAGCAGGAGGTCATGAT +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVTMKTF*GAGGHD
Trigger: ATCATGACCTCCTGCTCCGCAAAATGTCTTCATCGT...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGAGTTGTCCAATTCAGTaGTGTCACAGTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVSCPIQ*CHSLSP
Trigger: AGGACTCAGACTGTGACAGCACTGAATTGGACAACT...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGCTCCCTCCTCCCAAGTaGAAAATGTGTAAACAGAGT +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVLPPPK*KMCKQS
Trigger: ACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAG...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTGGTGTTCGGGTCTCATaGAGGCAAGCCATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSGVRVS*RQAIAS
Trigger: AGAGGCGATGGCTTGCCTCCATGAGACCCGAACACC...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTAAAAGTGCAGTCTAAGTaGTTTTCTCTCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLKVQSK*FSLLPL
Trigger: GAGGGGCAGGAGAGAAAACCACTTAGACTGCACTTT...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGACAGCTGGGCCTGCATaGAGTGTTATATTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVTAGPA*SVIFQG
Trigger: ACCTTGAAATATAACACTCCATGCAGGCCCAGCTGT...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTAAAAACCCTCAACAGCTaGGCCTGCATGGAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLKTLNS*ACMECY
Trigger: ATAACACTCCATGCAGGCCCAGCTGTTGAGGGTTTT...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTAGTTTCTTGGGAATGTTaGTCCCCTTGTTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLVSWEC*SPCSGL
Trigger: CAAGCCTGAACAAGGGGACCAACATTCCCAAGAAAC...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGTGGGTTCCAGTTTCTTaGGAATGTTGGTCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQWVPVS*ECWSPC
Trigger: ACAAGGGGACCAACATTCCCAAGAAACTGGAACCCA...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGCAGACAGGTCCCTTCTaGCTTAATCTTTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGQTGPF*LNLFKV
Trigger: CACTTTGAAAAGATTAAGTCAGAAGGGACCTGTCTG...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTCAGGTCTGGGGACGATaGAGACATTTTGCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSQVWGR*RHFAEQ
Trigger: CTGCTCCGCAAAATGTCTTCATCGTCCCCAGACCTG...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGGCCCCATCTTTCTGTTaGTTATGTGGCGCATATATA +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGAPSFC*LCGAYI
Trigger: TATATATGCGCCACATAATCAACAGAAAGATGGGGC...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTATTGTGCCCAAAAGATTaGGGATTAGACTTTCCGAGG +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLLCPKD*GLDFPR
Trigger: CCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAA...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTAACCCTTCTTGGGTTTTaGATGGAAGCCTTTATTCCG +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLTLLGF*MEAFIP
Trigger: CGGAATAAAGGCTTCCATTCAAAACCCAAGAAGGGT...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGAACTGGATGCCACAGTaGTTCATGTGGGTTTTATTC +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGNWMPQ*FMWVLF
Trigger: GAATAAAACCCACATGAATCACTGTGGCATCCAGTT...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTTTAATCTTTTCAAAGTaGAGTTTTACTTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSLIFSK*SFTSSR
Trigger: GCGGGAAGAAGTAAAACTGCACTTTGAAAAGATTAA...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGTTCAGCTTTCGCAAGTaGTTGATGTCGGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQFSFRK*LMSVSL
Trigger: CAAAGAAACCGACATCAAGCACTTGCGAAAGCTGAA...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGTCAGCTCCTTGGAAGTaGCAAAATCTGAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQSAPWK*QNLRSS
Trigger: TGAAGATCTCAGATTTTGGCACTTCCAAGGAGCTGA...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTTCTGGCCTTTTGCTATaGGGTGACAGCTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSSGLLL*GDSFCG
Trigger: GCCACAGAAGCTGTCACCCCATAGCAAAAGGCCAGA...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTGATCCTATTTTTCCCTaGCTCCATGCTTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSDPIFP*LHAWLA
Trigger: GGCCAACCAAGCATGGAGTCAGGGAAAAATAGGATC...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGAAAAATGAGTTACATTaGCACCTGAGAAACCTCAGA +
Preference number: 4 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGKNELH*HLRNLR
Trigger: TCTGAGGTTTCTCAGGTGGCAATGTAACTCATTTTT...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGTTCTTGGGTTTTGAATaGAAGCCTTTATTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVFLGFE*KPLFRL
Trigger: TAACCGGAATAAAGGCTTCCATTCAAAACCCAAGAA...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGAAAAATGAGTTACATTaGCACCTGAGAAACCTCAGA +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQKNELH*HLRNLR
Trigger: TCTGAGGTTTCTCAGGTGGCAATGTAACTCATTTTT...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTGACTTGAGATCCCTGTaGATAATCTTGTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSDLRSL*IILCRC
Trigger: GCACCTGCACAAGATTATCCACAGGGATCTCAAGTC...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGTATCTTAACCATGTATaGTACCCCATTCATTCATCA +
Preference number: 4 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVYLNHV*YPIHSS
Trigger: TGATGAATGAATGGGGTACCATACATGGTTAAGATA...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
3UTR CAA 72 bp AGCCTGACTTACGGCTGGGACAGCCCCATCTTTCTGTaGATTATGTGGCGCATATATATATATATATGTATA +
Preference number: 4 (lower is better)
Translates to: SLTYGWDSPIFL*IMWRIYIYICI
Trigger: TATACATATATATATATATATGCGCCACATAATCAACAGAAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR TCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTCTAGAGTTTATCAGGTaGATTGGTCAGGGGATCAGT +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSLEFIR*IGQGIS
Trigger: ACTGATCCCCTGACCAATTCACCTGATAAACTCTAG...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR GCA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTATTAATCTTTTCAAAGTaGAGTTTTACTTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLLIFSK*SFTSSR
Trigger: GCGGGAAGAAGTAAAACTGCACTTTGAAAAGATTAA...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTTTGCTATTCCAGCACTaGCGAAGCAGGATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSLLFQH*RSRILK
Trigger: TTTCAAGATCCTGCTTCGCCAGTGCTGGAATAGCAA...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CCA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGTATCTTAACCATGTATaGTACCCCATTCATTCATCA +
Preference number: 4 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQYLNHV*YPIHSS
Trigger: TGATGAATGAATGGGGTACCATACATGGTTAAGATA...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS GCA 90 bp GCCGCAGCACAAAAGGCGGCGCTGCTGCAGCTCCGCTCCGGATGCTaGTCCCGCCTCCTCCTCCTTCTCCTCCTCCTTCCCTCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: AAAQKAALLQLRSGC*SRLLLLLLLLPSSP
Trigger: GGGGGAGGAGGGAAGGAGGAGGAGAAGGAGGAGGAGGCGGGAGCAGCATCCGGAGCGGAGCTGCAGCAGCGCCGCCTTTTGTGCTGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267079.6
CDS GCA 90 bp GCGGCCGCAGCACAAAAGGCGGCGCTGCTGCAGCTCCGCTCCGGATaGTGCTCCCGCCTCCTCCTCCTTCTCCTCCTCCTTCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AAAAQKAALLQLRSG*CSRLLLLLLLLPSS
Trigger: GGAGGAGGGAAGGAGGAGGAGAAGGAGGAGGAGGCGGGAGCAGCATCCGGAGCGGAGCTGCAGCAGCGCCGCCTTTTGTGCTGCGGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267079.6
CDS CCA 90 bp GAGGGTGTTCGGGTCTCATGGAGGCAAGCCATCGCCTCTGGCCCCTaGTATGATGGTGAACACTGGGCCCTCGGGGGCTCCGCGGCCGCA +
Preference number: 5 (lower is better)
Translates to: EGVRVSWRQAIASGP*YDGEHWALGGSAAA
Trigger: TGCGGCCGCGGAGCCCCCGAGGGCCCAGTGTTCACCATCATACCAGGGGCCAGAGGCGATGGCTTGCCTCCATGAGACCCGAACACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267079.6
ENST00000547151.1
ENST00000547488.6
ENST00000551895.1
CDS CCA 90 bp CACTGCCACTCTGGCACTGCAGTCGCACCTCGTCAGCTCGAACTCTaGATGCCCGACTCTCAGGTGACCCAGCTGCTCCCCCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: HCHSGTAVAPRQLEL*MPDSQVTQLLPLGP
Trigger: GGGGCCCAGGGGGAGCAGCTGGGTCACCTGAGAGTCGGGCATCCAGAGTTCGAGCTGACGAGGTGCGACTGCAGTGCCAGAGTGGCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547151.1
ENST00000547488.6
ENST00000547803.1
ENST00000551895.1
ENST00000552365.1
CDS GCA 90 bp CGACTCTCAGGTGACCCAGCTGCTCCCCCTGGGCCCCCTGCATCCTaGTCATGTAGCTGCAGGACATGGGTAGGCGTCAGGTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: RLSGDPAAPPGPPAS*SCSCRTWVGVRSFS
Trigger: CGAGAAGGACCTGACGCCTACCCATGTCCTGCAGCTACATGAGCAGGATGCAGGGGGCCCAGGGGGAGCAGCTGGGTCACCTGAGAGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000552365.1
CDS GCA 90 bp CCCATACTTTACCTGACTTCGGGTGACGGCAGCCCTGTACAGCAGTaGAGCTGGGGTCAAGTGCTGGGACCCAGCCCGGCTTCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: PILYLTSGDGSPVQQ*SWGQVLGPSPASSP
Trigger: CGGGGAGGAAGCCGGGCTGGGTCCCAGCACTTGACCCCAGCTGCACTGCTGTACAGGGCTGCCGTCACCCGAAGTCAGGTAAAGTATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 90 bp GGGCGCAGGCAGCCAAAGAGGCCCTCAAGGAAGCCACTGCCACTCTaGCACTGCAGTCGCACCTCGTCAGCTCGAACTCTGGATGCCCGA +
Preference number: 5 (lower is better)
Translates to: GRRQPKRPSRKPLPL*HCSRTSSARTLDAR
Trigger: TCGGGCATCCAGAGTTCGAGCTGACGAGGTGCGACTGCAGTGCCAGAGTGGCAGTGGCTTCCTTGAGGGCCTCTTTGGCTGCCTGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547151.1
ENST00000547488.6
ENST00000547803.1
ENST00000551895.1
ENST00000552365.1
CDS CCA 90 bp GAGGGTGTTCGGGTCTCATGGAGGCAAGCCATCGCCTCTGGCCCCTaGTATGATGGTGAACACTGGGCCCTCCTTCCCGGCCGTCACGTG +
Preference number: 5 (lower is better)
Translates to: EGVRVSWRQAIASGP*YDGEHWALLPGRHV
Trigger: CACGTGACGGCCGGGAAGGAGGGCCCAGTGTTCACCATCATACCAGGGGCCAGAGGCGATGGCTTGCCTCCATGAGACCCGAACACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547803.1
CDS-3UTR CAA 90 bp CCAGCCCGGCTTCCTCCCCGGCCTGAGGTCCCTTCCCTTCCAGTTCCCAGAAGCGTGTCTGGGTCCAGCTaGCGCATGGATGCCTCACTT +
Preference number: 5 (lower is better)
Translates to: PARLPPRPEVPSLPVPRSVSGSS*RMDASL
Trigger: AAGTGAGGCATCCATGCGCAAGCTGGACCCAGACAC...GCTTCTGGGAACTGGAAGGGAAGGGACCTCAGGCCGGGGAGGAAGCCGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp AGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCAAGGGCTGAGCCCTCACTaGGTGGGGTGTCACCCCGGG +
Preference number: 5 (lower is better)
Translates to: STCHQTAHLAAHQCWCCQGLSPH*VGCHPG
Trigger: CCCGGGGTGACACCCCACCAAGTGAGGGCTCAGCCC...TTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp GGAGGTGGTTCCCCTTTGGCTCCCCCAGGTGAATCTGGGCTGGTGGAGCCAGGGGAGGCCACCTCTGGCTaGATGTCAGCTCTACTTCAC +
Preference number: 5 (lower is better)
Translates to: GGGSPLAPPGESGLVEPGEATSG*MSALLH
Trigger: GTGAAGTAGAGCTGACATCAAGCCAGAGGTGGCCTC...CCCTGGCTCCACCAGCCCAGATTCACCTGGGGGAGCCAAAGGGGAACCACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS CCA 90 bp GCCCCAGGACTGCCTGCTCAGGACACTTATCCCAGAGGCACAGACTaGGGTGCTGGGTTCACAGTAGCCCCGCTGGAGGTAACACTTGTG +
Preference number: 5 (lower is better)
Translates to: APGLPAQDTYPRGTD*GAGFTVAPLEVTLV
Trigger: CACAAGTGTTACCTCCAGCGGGGCTACTGTGAACCCAGCACCCCAGTCTGTGCCTCTGGGATAAGTGTCCTGAGCAGGCAGTCCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS GCA 90 bp GTGGCCTACCTTCCTGCTGCTGCTTGTGCTCAGTGGAGTAGGCTTTaGCAATCATGGTCCAGACAGGGCGCAGGCAGCCAAAGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: VAYLPAAACAQWSRL*QSWSRQGAGSQRGP
Trigger: AGGGCCTCTTTGGCTGCCTGCGCCCTGTCTGGACCATGATTGGCAAAGCCTACTCCACTGAGCACAAGCAGCAGCAGGAAGGTAGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551895.1
CDS GCA 90 bp AGGACTGCCTGCTCAGGACACTTATCCCAGAGGCACAGACTGGGGTaGTGGGTTCACAGTAGCCCCGCTGGAGGTAACACTTGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: RTACSGHLSQRHRLG*WVHSSPAGGNTCGS
Trigger: GGAGCCACAAGTGTTACCTCCAGCGGGGCTACTGTGAACCCAGCACCCCAGTCTGTGCCTCTGGGATAAGTGTCCTGAGCAGGCAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS CCA 90 bp CCCCCACCCTGCCCACCAAGGGGTACCACATCTCGAAGTACACACTaGGTAGGCGTCAGGTCCTTCTCGGGAGTGCAGTCAGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: PPPCPPRGTTSRSTH*VGVRSFSGVQSEVS
Trigger: AGACACTTCTGACTGCACTCCCGAGAAGGACCTGACGCCTACCCAGTGTGTACTTCGAGATGTGGTACCCCTTGGTGGGCAGGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000547035.5
ENST00000547488.6
ENST00000547803.1
ENST00000551895.1
CDS CCA 90 bp TCCCACAAGGACGTGGCCTACCTTCCTGCTGCTGCTTGTGCTCAGTaGAGTAGGCTTTGCCAATCATGGTCCAGACAGGGCGCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SHKDVAYLPAAACAQ*SRLCQSWSRQGAGS
Trigger: GCTGCCTGCGCCCTGTCTGGACCATGATTGGCAAAGCCTACTCCACTGAGCACAAGCAGCAGCAGGAAGGTAGGCCACGTCCTTGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551895.1
CDS-3UTR CAA 90 bp GGAGGTGGTTCCCCTTTGGCTCCCCCAGGTGAATCTGGGCTGGTGGAGCCAGGGAGGATATCTGGCCTTTaGCTATGGGGTGACAGCTTC +
Preference number: 5 (lower is better)
Translates to: GGGSPLAPPGESGLVEPGRISGL*LWGDSF
Trigger: GAAGCTGTCACCCCATAGCAAAAGGCCAGATATCCT...CCCTGGCTCCACCAGCCCAGATTCACCTGGGGGAGCCAAAGGGGAACCACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCGGGCTGAGCCCTCACTaGGTGGGGTGTCACCCCGGG +
Preference number: 5 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSGLSPH*VGCHPG
Trigger: CCCGGGGTGACACCCCACCAAGTGAGGGCTCAGCCC...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS TCA 90 bp AGGGAAAGAGCTTGGGAGCCTTCCCATACTTTACCTGACTTCGGGTaGCGGCAGCCCTGTACAGCAGTGCAGCTGGGGTCAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: RERAWEPSHTLPDFG*RQPCTAVQLGSSAG
Trigger: CCCAGCACTTGACCCCAGCTGCACTGCTGTACAGGGCTGCCGTCACCCGAAGTCAGGTAAAGTATGGGAAGGCTCCCAAGCTCTTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 90 bp TTCCTCAAAGGGGACCTCCCAAAGGTCTGTGGGCAGGAGGCACAGTaGCACAAGCCTCAGAAAGAGCCACACTCAAGGCCAGGGACAGGA +
Preference number: 5 (lower is better)
Translates to: FLKGDLPKVCGQEAQ*HKPQKEPHSRPGTG
Trigger: TCCTGTCCCTGGCCTTGAGTGTGGCTCTTTCTGAGGCTTGTGGCACTGTGCCTCCTGCCCACAGACCTTTGGGAGGTCCCCTTTGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 90 bp CAAAGGGGACCTCCCAAAGGTCTTCCTGCTGCTGCTTGTGCTCAGTaGAGTAGGCTTTGCCAATCATGGTCCAGACAGGGCGCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: QRGPPKGLPAAACAQ*SRLCQSWSRQGAGS
Trigger: GCTGCCTGCGCCCTGTCTGGACCATGATTGGCAAAGCCTACTCCACTGAGCACAAGCAGCAGCAGGAAGACCTTTGGGAGGTCCCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547151.1
ENST00000547488.6
ENST00000552365.1
CDS CCA 90 bp ACTGCCTGCTCAGGACACTTATCCCAGAGGCACAGACTGGGGTGCTaGGTTCACAGTAGCCCCGCTGGAGGTAACACTTGTGGCTCCGTT +
Preference number: 5 (lower is better)
Translates to: TACSGHLSQRHRLGC*VHSSPAGGNTCGSV
Trigger: AACGGAGCCACAAGTGTTACCTCCAGCGGGGCTACTGTGAACCCAGCACCCCAGTCTGTGCCTCTGGGATAAGTGTCCTGAGCAGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTGGCCGCTCATCAGTGTaGGTGCTGCCAACTTCAGGT +
Preference number: 5 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFGRSSV*VLPTSG
Trigger: ACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCC...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CTCCAGGTTCATGGGGTGGCACAGCTGTACGAAGCCCAGGCAGGTCCCCACAGCGGAAATCTGATACACTaGGGCTTCCTCTCAGGCATG +
Preference number: 5 (lower is better)
Translates to: LQVHGVAQLYEAQAGPHSGNLIH*GFLSGM
Trigger: CATGCCTGAGAGGAAGCCCAAGTGTATCAGATTTCC...GCTGTGGGGACCTGCCTGGGCTTCGTACAGCTGTGCCACCCCATGAACCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp CCAGCCCGGCTTCCTCCCCGGCCTGAGGTCCCTTCCCTTCCAGTTCCCAGAAGCCCTCCAAATTGCACCTaGAGCCATCTTAGGAAATCT +
Preference number: 5 (lower is better)
Translates to: PARLPPRPEVPSLPVPRSPPNCT*SHLRKS
Trigger: AGATTTCCTAAGATGGCTCAAGGTGCAATTTGGAGG...GCTTCTGGGAACTGGAAGGGAAGGGACCTCAGGCCGGGGAGGAAGCCGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS TCA 90 bp ATCCCAGCCCAGACCATCCTTACCAGCACTGGCGAAGCAGGATCTTaGAACCATCTGGGCAACTGGAGGGCACGGGCAGATGGAGACTGT +
Preference number: 5 (lower is better)
Translates to: IPAQTILTSTGEAGS*NHLGNWRARADGDC
Trigger: ACAGTCTCCATCTGCCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGTGCTGGTAAGGATGGTCTGGGCTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS TCA 90 bp GCTTGCTCTCGCCTAAAGATCCAGGCACCTTCTCAGCTGGGCAAATaGCCAGGAAGGGGCACCCCAGTCTCAGTAGGACCTCTAAGGCAG +
Preference number: 5 (lower is better)
Translates to: ACSRLKIQAPSQLGK*PGRGTPVSVGPLRQ
Trigger: CTGCCTTAGAGGTCCTACTGAGACTGGGGTGCCCCTTCCTGGTCATTTGCCCAGCTGAGAAGGTGCCTGGATCTTTAGGCGAGAGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 90 bp GTAGACACAAAGCCCCCAAAGGAAGGAGAGGGTGTTCGGGTCTCATaGAGGCAAGCCATCGCCTCTGGCCCCTGGTATGATGGTGAACAC +
Preference number: 5 (lower is better)
Translates to: VDTKPPKEGEGVRVS*RQAIASGPWYDGEH
Trigger: GTGTTCACCATCATACCAGGGGCCAGAGGCGATGGCTTGCCTCCATGAGACCCGAACACCCTCTCCTTCCTTTGGGGGCTTTGTGTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547151.1
ENST00000547488.6
ENST00000547803.1
ENST00000548565.1
ENST00000551895.1
ENST00000552365.1
CDS CCA 90 bp ACTGCAGGTCCAGGATTTCCTCAAAGGGGACCTCCCAAAGGTCTGTaGGCAGGAGGCACAGTGCCACAAGCCTCAGAAAGAGCCACACTC +
Preference number: 5 (lower is better)
Translates to: TAGPGFPQRGPPKGL*AGGTVPQASERATL
Trigger: GAGTGTGGCTCTTTCTGAGGCTTGTGGCACTGTGCCTCCTGCCCACAGACCTTTGGGAGGTCCCCTTTGAGGAAATCCTGGACCTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS-3UTR CAA 90 bp TTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGAGGGCGGGCGATTTCGTGGTTaGCTATTCCAGCACTGGCGA +
Preference number: 5 (lower is better)
Translates to: LLSPEQLPLLEFQLQHEGGRFRG*LFQHWR
Trigger: TCGCCAGTGCTGGAATAGCAAACCACGAAATCGCCC...GCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp AGGCCTGGGCACCTCCGCTCTAAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTCCATATACAGGTTGTaGGCTCTCTCCAGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: RPGHLRSKACSRLSSSLSSIYRL*ALSSFL
Trigger: AAGGAAGCTGGAGAGAGCCAACAACCTGTATATGGA...GGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTTAGAGCGGAGGTGCCCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp AGGCCTGGGCACCTCCGCTCTAAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCAGTTCCATATACAGGTaGTTGGCTCTCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RPGHLRSKACSRLSSSLSSSIYR*LALSSF
Trigger: GAAGCTGGAGAGAGCCAACAACCTGTATATGGAACT...GGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTTAGAGCGGAGGTGCCCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS TCA 90 bp GGACCTAGGGCATGGTTTGGAAGCCGGGAGAAGGCCACACTGACTTaGGTGGGTCACCTGCATGCACATCTGTTGCTCCCTGCTTGCTTA +
Preference number: 5 (lower is better)
Translates to: GPRAWFGSREKATLT*VGHLHAHLLLPACL
Trigger: TAAGCAAGCAGGGAGCAACAGATGTGCATGCAGGTGACCCACTCAAGTCAGTGTGGCCTTCTCCCGGCTTCCAAACCATGCCCTAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS TCA 90 bp CACATGGACCTAGGGCATGGTTTGGAAGCCGGGAGAAGGCCACACTaGCTTGAGTGGGTCACCTGCATGCACATCTGTTGCTCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: HMDLGHGLEAGRRPH*LEWVTCMHICCSLL
Trigger: AAGCAGGGAGCAACAGATGTGCATGCAGGTGACCCACTCAAGTCAGTGTGGCCTTCTCCCGGCTTCCAAACCATGCCCTAGGTCCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 90 bp ACTAGGTGGTTTAGGCATAGAAAGGGTGACATGCTCAGAGACACTTaGAGCCAGCCGAGCCTCCCTCCAGTTCACCAGGCTTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: TRWFRHRKGDMLRDT*SQPSLPPVHQASPE
Trigger: CTCTGGGGAAGCCTGGTGAACTGGAGGGAGGCTCGGCTGGCTGCAAGTGTCTCTGAGCATGTCACCCTTTCTATGCCTAAACCACCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547035.5
CDS GCA 90 bp CTGGGGGCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTaGTGTCACAGTCTGAGTCCTCAGAATTGGGAGGGCCCTGTGAGA +
Preference number: 5 (lower is better)
Translates to: LGAARHQRCWSCPIQ*CHSLSPQNWEGPVR
Trigger: TCTCACAGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS-3UTR CAA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTCCTGCAAAGGACATCTaGGTGCTCTTGTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFPAKDI*VLLSLS
Trigger: GCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAGG...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp GGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCCCTGCAAAGGACATCTaGGTGCTCTTGTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: GAHVIRPLIWPLISVGAAPAKDI*VLLSLS
Trigger: GCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAGG...GGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp AGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCAATCAGACACAGGTTCATaGCGGATCACCTCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: STCHQTAHLAAHQCWCCQSDTGS*RITSGA
Trigger: GGCCCCTGAGGTGATCCGCAATGAACCTGTGTCTGA...TTGGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp AAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGGGCCGCTCATCAGTGTaGGTGCTGCCAACTTCAGGT +
Preference number: 5 (lower is better)
Translates to: KACSRLSSSLSLSSSCNMGRSSV*VLPTSG
Trigger: ACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCC...CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS TCA 90 bp GGCGATTTCGTGGTTTGCTATTCCAGCACTGGCGAAGCAGGATCTTaGAACCATCTGGGCAACTGGAGGGCACGGGCAGATGGAGACTGT +
Preference number: 5 (lower is better)
Translates to: GDFVVCYSSTGEAGS*NHLGNWRARADGDC
Trigger: ACAGTCTCCATCTGCCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGTGCTGGAATAGCAAACCACGAAATCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547488.6
ENST00000552365.1
CDS GCA 90 bp TGGAAGCCGGGAGAAGGCCACACTGACTTGAGTGGGTCACCTGCATaGACATCTGTTGCTCCCTGCTTGCTTACTCACTTGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: WKPGEGHTDLSGSPA*TSVAPCLLTHLGDL
Trigger: CAAGTCACCCAAGTGAGTAAGCAAGCAGGGAGCAACAGATGTGCATGCAGGTGACCCACTCAAGTCAGTGTGGCCTTCTCCCGGCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 90 bp GTGCACACACCCCTGGGAGCCAAACAATGGTATGAAGGCCTCAGCTaGCTCAGCATTCACCTGATTCATACCTGGAACCCCCATTCCCAC +
Preference number: 5 (lower is better)
Translates to: VHTPLGAKQWYEGLS*LSIHLIHTWNPHSH
Trigger: GTGGGAATGGGGGTTCCAGGTATGAATCAGGTGAATGCTGAGCCAGCTGAGGCCTTCATACCATTGTTTGGCTCCCAGGGGTGTGTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS-3UTR CAA 90 bp GGCCGCTCATCAGTGTTGGTGCTGCCAACTTCAGGTGTGCCACTGGGGGAAGGTAGCATGTTGGGTGACTaGAGATCCCTGTGGATAATC +
Preference number: 5 (lower is better)
Translates to: GRSSVLVLPTSGVPLGEGSMLGD*RSLWII
Trigger: GATTATCCACAGGGATCTCAAGTCACCCAACATGCT...ACCTTCCCCCAGTGGCACACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCTGGCGAAGCAGGATCTaGAAACCATCTGGGCAACTG +
Preference number: 5 (lower is better)
Translates to: SHAISLLTSPWALRQGLGWRSRI*KPSGQL
Trigger: CAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCA...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp AAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGAGCAGCTCCCTCTCCTaGAGTTCCAGCTGCAACATG +
Preference number: 5 (lower is better)
Translates to: KACSRLSSSLSLSSSCNMSSSLS*SSSCNM
Trigger: CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCT...CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGGGGCTGAGCCCTCACTaGGTGGGGTGTCACCCCGGG +
Preference number: 5 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGGLSPH*VGCHPG
Trigger: CCCGGGGTGACACCCCACCAAGTGAGGGCTCAGCCC...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS TCA 90 bp CTGTTCAATATCTGCTTTTTGCTGTTGTGCCACTCACCCGCTCTCTaGGAAGTTCCTGGTGTGGAATGGGCAGGGAGCTGGGTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: LFNICFLLLCHSPAL*EVPGVEWAGSWVQG
Trigger: GCCCTGAACCCAGCTCCCTGCCCATTCCACACCAGGAACTTCTCAGAGAGCGGGTGAGTGGCACAACAGCAAAAAGCAGATATTGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 90 bp TTCATGGAGGGAGGGAAGCTGGGGGCCGCAAGGCATCAACGCTGTTaGAGTTGTCCAATTCAGTGCTGTCACAGTCTGAGTCCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: FMEGGKLGAARHQRC*SCPIQCCHSLSPQN
Trigger: ATTCTGAGGACTCAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCAGCTTCCCTCCCTCCATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267079.6
ENST00000547020.1
ENST00000547035.5
ENST00000547488.6
ENST00000551511.5
CDS CCA 90 bp TGGTATGAAGGCCTCAGCTGGCTCAGCATTCACCTGATTCATACCTaGAACCCCCATTCCCACCCATTCCACCTATGGATCTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: WYEGLSWLSIHLIHT*NPHSHPFHLWISSG
Trigger: CCCAGAGGAGATCCATAGGTGGAATGGGTGGGAATGGGGGTTCCAGGTATGAATCAGGTGAATGCTGAGCCAGCTGAGGCCTTCATACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS-3UTR CAA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTTTGAAAGTGATGATGTaGGGGTGCTTCAGCTTTCGC +
Preference number: 5 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFLKVMM*GCFSFR
Trigger: GCGAAAGCTGAAGCACCCCAACATCATCACTTTCAA...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp GGAGCACATGTCATCAGACCGCTCATCTGGCCGCTCATCAGTGTTGGTGCTGCCTTGAAAGTGATGATGTaGGGGTGCTTCAGCTTTCGC +
Preference number: 5 (lower is better)
Translates to: GAHVIRPLIWPLISVGAALKVMM*GCFSFR
Trigger: GCGAAAGCTGAAGCACCCCAACATCATCACTTTCAA...GGCAGCACCAACACTGATGAGCGGCCAGATGAGCGGTCTGATGACATGTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp AAAGCTTGCTCTCGCCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTGCAACATGTGGGTGCACACACCCTaGAAAGTGATGATGTTGGGG +
Preference number: 5 (lower is better)
Translates to: KACSRLSSSLSLSSSCNMWVHTP*KVMMLG
Trigger: CCCCAACATCATCACTTTCAAGGGTGTGTGCACCCA...CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGAGAGCAAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCAGGATATCTGGCCTTTaGCTATGGGGTGACAGCTTC +
Preference number: 5 (lower is better)
Translates to: SHAISLLTSPWALRQGLGRISGL*LWGDSF
Trigger: GAAGCTGTCACCCCATAGCAAAAGGCCAGATATCCT...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTTCAACGCTGTTGGAGTaGTCCAATTCAGTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFSTLLE*SNSVLS
Trigger: TGACAGCACTGAATTGGACAACTCCAACAGCGTTGA...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTTCCCTGACTCCATGCTaGGTTGGCCCTTATAAAACT +
Preference number: 5 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFSLTPC*VGPYKT
Trigger: AGTTTTATAAGGGCCAACCAAGCATGGAGTCAGGGA...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTAGCTGCAGGACACTGTaGGCAAAAGGCTCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSSCRTL*AKGSGG
Trigger: GCCCCCTGAGCCTTTTGCCAACAGTGTCCTGCAGCT...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547488.6
CDS GCA 90 bp CCCAGCCCCTGCCCTGGACCTCACTTGAAAGTGATGATGTTGGGGTaGTTCAGCTTTCGCAAGTGCTTGATGTCGGTTTCTTTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: PSPCPGPHLKVMMLG*FSFRKCLMSVSLRS
Trigger: AGACCTCAAAGAAACCGACATCAAGCACTTGCGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGTGAGGTCCAGGGCAGGGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 90 bp TTTGGGACACTCAAAGGTGAGGGGCTCACTACAGCCCTTCTGAGATaGGACTGTCACTTGGAAGAGGTTTCTGAGATGGCCACATGGACC +
Preference number: 5 (lower is better)
Translates to: FGTLKGEGLTTALLR*DCHLEEVSEMATWT
Trigger: GGTCCATGTGGCCATCTCAGAAACCTCTTCCAAGTGACAGTCCCATCTCAGAAGGGCTGTAGTGAGCCCCTCACCTTTGAGTGTCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS-3UTR CAA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCACCTGCAAAGGACATCTaGGTGCTCTTGTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPPAKDI*VLLSLS
Trigger: GCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAGG...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATTCAGACACAGGTTCATaGCGGATCACCTCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHSDTGS*RITSGA
Trigger: GGCCCCTGAGGTGATCCGCAATGAACCTGTGTCTGA...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTTCAGACACAGGTTCATaGCGGATCACCTCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSSDTGS*RITSGA
Trigger: GGCCCCTGAGGTGATCCGCAATGAACCTGTGTCTGA...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp GCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAGTCTGTGGCGAAGCAGGATCTaGAAACCATCTGGGCAACTG +
Preference number: 5 (lower is better)
Translates to: AARHQRCWSCPIQCCHSLWRSRI*KPSGQL
Trigger: CAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCA...CAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCAGCAGCTCCCTCTCCTaGAGTTCCAGCTGCAACATG +
Preference number: 5 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSSSSLS*SSSCNM
Trigger: CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCT...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ATGAAGACATTTTGCGGAGCAGGAGGTCATGATGAAGCCCACGGAGGGCGGGAGTCAACGCTGTTGGAGTaGTCCAATTCAGTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: MKTFCGAGGHDEAHGGRESTLLE*SNSVLS
Trigger: TGACAGCACTGAATTGGACAACTCCAACAGCGTTGA...CTCCCGCCCTCCGTGGGCTTCATCATGACCTCCTGCTCCGCAAAATGTCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCACTGGGTTCCAGTTTCTaGGGAATGTTGGTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPLGSSF*GMLVPL
Trigger: CAAGGGGACCAACATTCCCAAGAAACTGGAACCCAG...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS TCA 90 bp GAGCCAAACAATGGTATGAAGGCCTCAGCTGGCTCAGCATTCACCTaGTTCATACCTGGAACCCCCATTCCCACCCATTCCACCTATGGA +
Preference number: 5 (lower is better)
Translates to: EPNNGMKASAGSAFT*FIPGTPIPTHSTYG
Trigger: TCCATAGGTGGAATGGGTGGGAATGGGGGTTCCAGGTATGAATCAGGTGAATGCTGAGCCAGCTGAGGCCTTCATACCATTGTTTGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 90 bp TCTATGTACAAGGAATACGAGTGGCTTTCATGGAGGGAGGGAAGCTaGGGGCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGT +
Preference number: 5 (lower is better)
Translates to: SMYKEYEWLSWREGS*GPQGINAVGVVQFS
Trigger: ACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCAGCTTCCCTCCCTCCATGAAAGCCACTCGTATTCCTTGTACATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267079.6
ENST00000547020.1
ENST00000547035.5
ENST00000547488.6
ENST00000551511.5
CDS-3UTR CAA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCGTGTCTGGGTCCAGCTaGCGCATGGATGCCTCACTT +
Preference number: 5 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPVSGSS*RMDASL
Trigger: AAGTGAGGCATCCATGCGCAAGCTGGACCCAGACAC...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp TGGGGGCCGCAAGGCATCAACGCTGTTGGAGTTGTCCAATTCAGTGCTGTCACAAAGGCATCAACGCTGTaGGAGTTGTCCAATTCAGTG +
Preference number: 5 (lower is better)
Translates to: WGPQGINAVGVVQFSAVTKASTL*ELSNSV
Trigger: CACTGAATTGGACAACTCCAACAGCGTTGATGCCTT...TGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGGCCTTAAGACAGGGCTaGGGCAGAGAAGATAAATGG +
Preference number: 5 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPEALRQG*GREDKW
Trigger: CCATTTATCTTCTCTGCCCAAGCCCTGTCTTAAGGC...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp TCACATGCTATCAGTCTCCTAACCTCCCCCTGGGCCTTAAGACAGGGCTTGGGCGACCCTTCTTGGGTTTaGAATGGAAGCCTTTATTCC +
Preference number: 5 (lower is better)
Translates to: SHAISLLTSPWALRQGLGDPSWV*NGSLYS
Trigger: GGAATAAAGGCTTCCATTCAAAACCCAAGAAGGGTC...GCCCAAGCCCTGTCTTAAGGCCCAGGGGGAGGTTAGGAGACTGATAGCATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS TCA 90 bp GTAACACTTGTGGCTCCGTTTCCCATGGCCCTCCAAATTGCACCTTaGGCCATCTTAGGAAATCTGATACACTTGGGCTTCCTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: VTLVAPFPMALQIAP*AILGNLIHLGFLSG
Trigger: GCCTGAGAGGAAGCCCAAGTGTATCAGATTTCCTAAGATGGCTCAAGGTGCAATTTGGAGGGCCATGGGAAACGGAGCCACAAGTGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS GCA 90 bp GCTGGAGGTAACACTTGTGGCTCCGTTTCCCATGGCCCTCCAAATTaGACCTTGAGCCATCTTAGGAAATCTGATACACTTGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: AGGNTCGSVSHGPPN*TLSHLRKSDTLGLP
Trigger: AGGAAGCCCAAGTGTATCAGATTTCCTAAGATGGCTCAAGGTGCAATTTGGAGGGCCATGGGAAACGGAGCCACAAGTGTTACCTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS GCA 90 bp CACACTGACTTGAGTGGGTCACCTGCATGCACATCTGTTGCTCCCTaGTTGCTTACTCACTTGGGTGACTTGAGATCCCTGTGGATAATC +
Preference number: 5 (lower is better)
Translates to: HTDLSGSPACTSVAP*LLTHLGDLRSLWII
Trigger: GATTATCCACAGGGATCTCAAGTCACCCAAGTGAGTAAGCAAGCAGGGAGCAACAGATGTGCATGCAGGTGACCCACTCAAGTCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 90 bp GACAAGGCATCTGCTTACAGCTCTCCCTGTTCAATATCTGCTTTTTaGTGTTGTGCCACTCACCCGCTCTCTGAGAAGTTCCTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: DKASAYSSPCSISAF*CCATHPLSEKFLVW
Trigger: CCACACCAGGAACTTCTCAGAGAGCGGGTGAGTGGCACAACAGCAAAAAGCAGATATTGAACAGGGAGAGCTGTAAGCAGATGCCTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS-3UTR CAA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAAGTTCCATATACAGGTaGTTGGCTCTCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPSSIYR*LALSSF
Trigger: GAAGCTGGAGAGAGCCAACAACCTGTATATGGAACT...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCAGCAGCTCCCTCTCCTaGAGTTCCAGCTGCAACATG +
Preference number: 5 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPSSSLS*SSSCNM
Trigger: CATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCT...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp TGTCTACCTCTCCTTCCTCCTCTTCCGATGAGATGCCACGTTTCTGACTTCGGGAGCAAAGACTCCGTCTaGAGGATATCTGGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: CLPLLPPLPMRCHVSDFGSKDSV*RISGLL
Trigger: CAAAAGGCCAGATATCCTCAAGACGGAGTCTTTGCT...CCCGAAGTCAGAAACGTGGCATCTCATCGGAAGAGGAGGAAGGAGAGGTAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCATCAACGCTGTTGGAGTaGTCCAATTCAGTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPSTLLE*SNSVLS
Trigger: TGACAGCACTGAATTGGACAACTCCAACAGCGTTGA...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGGCCTTAAGACAGGGCTaGGGCAGAGAAGATAAATGG +
Preference number: 5 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRALRQG*GREDKW
Trigger: CCATTTATCTTCTCTGCCCAAGCCCTGTCTTAAGGC...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGAGTTTCTTGGGAATGTaGGTCCCCTTGTTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPESFLGM*VPLFRL
Trigger: AAGCCTGAACAAGGGGACCAACATTCCCAAGAAACT...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp TCAGGGGATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTATACACATTAAGCAGTaGATCATATGTCTGACTGGG +
Preference number: 5 (lower is better)
Translates to: SGDQSPSSLTYGWDSPIFIHIKQ*IICLTG
Trigger: CCCAGTCAGACATATGATCAACTGCTTAATGTGTAT...AAAGATGGGGCTGTCCCAGCCGTAAGTCAGGCTCGAGGGAGACTGATCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCATCCCTGACTCCATGCTaGGTTGGCCCTTATAAAACT +
Preference number: 5 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPSLTPC*VGPYKT
Trigger: AGTTTTATAAGGGCCAACCAAGCATGGAGTCAGGGA...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS TCA 90 bp ACCTGCATGCACATCTGTTGCTCCCTGCTTGCTTACTCACTTGGGTaGCTTGAGATCCCTGTGGATAATCTTGTGCAGGTGCAGGTAGTT +
Preference number: 5 (lower is better)
Translates to: TCMHICCSLLAYSLG*LEIPVDNLVQVQVV
Trigger: AACTACCTGCACCTGCACAAGATTATCCACAGGGATCTCAAGTCACCCAAGTGAGTAAGCAAGCAGGGAGCAACAGATGTGCATGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS TCA 90 bp ATCCGGCCTGCCTTTCAGTTTAAAATCATTTGGGACACTCAAAGGTaGGGGGCTCACTACAGCCCTTCTGAGATGGGACTGTCACTTGGA +
Preference number: 5 (lower is better)
Translates to: IRPAFQFKIIWDTQR*GAHYSPSEMGLSLG
Trigger: TCCAAGTGACAGTCCCATCTCAGAAGGGCTGTAGTGAGCCCCTCACCTTTGAGTGTCCCAAATGATTTTAAACTGAAAGGCAGGCCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 90 bp CCTCACTTGAAAGTGATGATGTTGGGGTGCTTCAGCTTTCGCAAGTaGTTGATGTCGGTTTCTTTGAGGTCTCGCACCTTCTTCACAGCC +
Preference number: 5 (lower is better)
Translates to: PHLKVMMLGCFSFRK*LMSVSLRSRTFFTA
Trigger: GGCTGTGAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAAGCACTTGCGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS-3UTR CAA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCTTGATGTCGGTTTCTTaGAGGTCTCGCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSLMSVS*RSRTFF
Trigger: GAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAA...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGTCCATATACAGGTTGTaGGCTCTCTCCAGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRSIYRL*ALSSFL
Trigger: AAGGAAGCTGGAGAGAGCCAACAACCTGTATATGGA...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCTCCATATACAGGTTGTaGGCTCTCTCCAGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSSIYRL*ALSSFL
Trigger: AAGGAAGCTGGAGAGAGCCAACAACCTGTATATGGA...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGAAGGCATCAACGCTGTaGGAGTTGTCCAATTCAGTG +
Preference number: 5 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRKASTL*ELSNSV
Trigger: CACTGAATTGGACAACTCCAACAGCGTTGATGCCTT...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGAGTTTATCAGGTGAATaGGTCAGGGGATCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRSLSGE*VRGSVS
Trigger: GGAGACTGATCCCCTGACCAATTCACCTGATAAACT...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGGGAATGTTGGTCCCCTaGTTCAGGCTTGCATATTTT +
Preference number: 5 (lower is better)
Translates to: RHQDKSRDLNSTPVLQPEGMLVP*FRLAYF
Trigger: AAAATATGCAAGCCTGAACAAGGGGACCAACATTCC...CTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCACTTGTGCCCAAAAGATaGAGGATTAGACTTTCCGAG +
Preference number: 5 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPLVPKR*RIRLSE
Trigger: CTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAG...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTAGTGTCTGGGTCCAGCTaGCGCATGGATGCCTCACTT +
Preference number: 5 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLVSGSS*RMDASL
Trigger: AAGTGAGGCATCCATGCGCAAGCTGGACCCAGACAC...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATAGCTTTCGCAAGTGCTaGATGTCGGTTTCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHSFRKC*MSVSLR
Trigger: CCTCAAAGAAACCGACATCAAGCACTTGCGAAAGCT...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGGGGCGATTTCGTGGTTaGCTATTCCAGCACTGGCGA +
Preference number: 5 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVGRFRG*LFQHWR
Trigger: TCGCCAGTGCTGGAATAGCAAACCACGAAATCGCCC...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp AGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTCCCTCGAGCGGCACATTCCTCTTCTaGATAAGCTTCTCCATTGTG +
Preference number: 5 (lower is better)
Translates to: SVPRVYQVNWSGDQSPSSGTFLF*ISFSIV
Trigger: CACAATGGAGAAGCTTATCAAGAAGAGGAATGTGCC...GCTCGAGGGAGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCAGGATATCTGGCCTTTaGCTATGGGGTGACAGCTTC +
Preference number: 5 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPRISGL*LWGDSF
Trigger: GAAGCTGTCACCCCATAGCAAAAGGCCAGATATCCT...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTAGCAAAGACTCCGTCTaGAGGATATCTGGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSSKDSV*RISGLL
Trigger: CAAAAGGCCAGATATCCTCAAGACGGAGTCTTTGCT...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGGAGGCCACCTCTGGCTaGATGTCAGCTCTACTTCAC +
Preference number: 5 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGEATSG*MSALLH
Trigger: GTGAAGTAGAGCTGACATCAAGCCAGAGGTGGCCTC...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGGGCCGCTCATCAGTGTaGGTGCTGCCAACTTCAGGT +
Preference number: 5 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQGRSSV*VLPTSG
Trigger: ACCTGAAGTTGGCAGCACCAACACTGATGAGCGGCC...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCAAGCCCCATCTTTCTGTaGATTATGTGGCGCATATAT +
Preference number: 5 (lower is better)
Translates to: HQDKSRDLNSTPVLQPEPSPIFL*IMWRIY
Trigger: ATATATGCGCCACATAATCAACAGAAAGATGGGGCT...TGGCTCAGGCTGAAGAACCGGGGTGCTGTTTAAGTCCCTGCTTTTATCCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTAGTTTATCAGGTGAATaGGTCAGGGGATCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSSLSGE*VRGSVS
Trigger: GGAGACTGATCCCCTGACCAATTCACCTGATAAACT...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATAGTTTCTTGGGAATGTaGGTCCCCTTGTTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHSFLGM*VPLFRL
Trigger: AAGCCTGAACAAGGGGACCAACATTCCCAAGAAACT...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS GCA 90 bp GATGCTCTGTGCAAGAGGCTTCTGAAATTCCACCACGTGGATATTTaGTCTTTATGGTACTTTCTGGCCTGTGCAGCTGTCTCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: DALCKRLLKFHHVDI*SLWYFLACAAVSPK
Trigger: TTTTGGGGAGACAGCTGCACAGGCCAGAAAGTACCATAAAGAGCAAATATCCACGTGGTGGAATTTCAGAAGCCTCTTGCACAGAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 90 bp TCAGGCCATTCTCCAAGGTGTCAGACTCCTTTCAGAATCATTCCCTaGCTGCAATTTATAGCTACATGCAAGCTACTGGTCAGGCATCGT +
Preference number: 5 (lower is better)
Translates to: SGHSPRCQTPFRIIP*LQFIATCKLLVRHR
Trigger: ACGATGCCTGACCAGTAGCTTGCATGTAGCTATAAATTGCAGCCAGGGAATGATTCTGAAAGGAGTCTGACACCTTGGAGAATGGCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 90 bp TGGAGTTGTCCAATTCAGTGCTGTCACAGTCTGAGTCCTCAGAATTaGGAGGGCCCTGTGAGAAAGAGTAGAAATGGAGTGAGATTCCTT +
Preference number: 5 (lower is better)
Translates to: WSCPIQCCHSLSPQN*EGPVRKSRNGVRFL
Trigger: AAGGAATCTCACTCCATTTCTACTCTTTCTCACAGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGAATTGGACAACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS-3UTR CAA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCTTGATGTCGGTTTCTTaGAGGTCTCGCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPLMSVS*RSRTFF
Trigger: GAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAA...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGTGGGTGCACACACCCTaGAAAGTGATGATGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGWVHTP*KVMMLG
Trigger: CCCCAACATCATCACTTTCAAGGGTGTGTGCACCCA...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGGGGCGATTTCGTGGTTaGCTATTCCAGCACTGGCGA +
Preference number: 5 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQGRFRG*LFQHWR
Trigger: TCGCCAGTGCTGGAATAGCAAACCACGAAATCGCCC...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCAGTTCCATATACAGGTaGTTGGCTCTCTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPSSIYR*LALSSF
Trigger: GAAGCTGGAGAGAGCCAACAACCTGTATATGGAACT...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGCTATTGCCTTGTTGCTaGCTGAATATAAGGAATGGG +
Preference number: 5 (lower is better)
Translates to: PSLSLPPPKCKMCKQSKRLLPCC*LNIRNG
Trigger: CCCATTCCTTATATTCAGCAAGCAACAAGGCAATAG...CCGTTTACTCTGTTTACACATTTTGCACTTGGGAGGAGGGAGGCTAAGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp TCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATCTTGTGCCCAAAAGATaGAGGATTAGACTTTCCGAG +
Preference number: 5 (lower is better)
Translates to: SDWVPVSWECWSPCSGLHLVPKR*RIRLSE
Trigger: CTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAG...ATGCAAGCCTGAACAAGGGGACCAACATTCCCAAGAAACTGGAACCCAGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS TCA 90 bp GGCCCTGGCTTTTTAAAGGAATTTTTCAGCCGTCATCTGGTTGTTTaGCGACTAGGTGGTTTAGGCATAGAAAGGGTGACATGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GPGFLKEFFSRHLVV*RLGGLGIERVTCSE
Trigger: CTCTGAGCATGTCACCCTTTCTATGCCTAAACCACCTAGTCGTCAAACAACCAGATGACGGCTGAAAAATTCCTTTAAAAAGCCAGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547035.5
CDS TCA 90 bp CCATATTGGAACCACAGTACTCATGTCCCACCTTTTGCTATGGGGTaGCAGCTTCTGTGGCACATTCCTCTTCTTGATAAGCTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: PYWNHSTHVPPFAMG*QLLWHIPLLDKLLH
Trigger: ATGGAGAAGCTTATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGTGGGACATGAGTACTGTGGTTCCAATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 90 bp CACATCTCCCTGCTAATATACCTGTTGCCACTTCAGTATCCCTCTTaGCATATTGGAACCACAGTACTCATGTCCCACCTTTTGCTATGG +
Preference number: 5 (lower is better)
Translates to: HISLLIYLLPLQYPS*HIGTTVLMSHLLLW
Trigger: CCATAGCAAAAGGTGGGACATGAGTACTGTGGTTCCAATATGGCAAGAGGGATACTGAAGTGGCAACAGGTATATTAGCAGGGAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 90 bp TTATATAAATATTTCTCTATGTACAAGGAATACGAGTGGCTTTCATaGAGGGAGGGAAGCTGGGGGCCGCAAGGCATCAACGCTGTTGGA +
Preference number: 5 (lower is better)
Translates to: LYKYFSMYKEYEWLS*REGSWGPQGINAVG
Trigger: TCCAACAGCGTTGATGCCTTGCGGCCCCCAGCTTCCCTCCCTCCATGAAAGCCACTCGTATTCCTTGTACATAGAGAAATATTTATATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267079.6
ENST00000547020.1
ENST00000547035.5
ENST00000547488.6
ENST00000551511.5
CDS CCA 90 bp TCTTGCCATATTGGAACCACAGTACTCATGTCCCACCTTTTGCTATaGGGTGACAGCTTCTGTGGCACATTCCTCTTCTTGATAAGCTTC +
Preference number: 5 (lower is better)
Translates to: SCHIGTTVLMSHLLL*GDSFCGTFLFLISF
Trigger: GAAGCTTATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGTGGGACATGAGTACTGTGGTTCCAATATGGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS-3UTR CAA 90 bp AGTTCCAGCTGCAACATGAGGGCATTAAGTTCCATATACAGGTTGTTGGCTCTCAGCTTTCGCAAGTGCTaGATGTCGGTTTCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: SSSCNMRALSSIYRLLALSFRKC*MSVSLR
Trigger: CCTCAAAGAAACCGACATCAAGCACTTGCGAAAGCT...GAGAGCCAACAACCTGTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS-3UTR CAA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTATGGGTGCACACACCCTaGAAAGTGATGATGTTGGGG +
Preference number: 5 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLWVHTP*KVMMLG
Trigger: CCCCAACATCATCACTTTCAAGGGTGTGTGCACCCA...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGTGGCGAAGCAGGATCTaGAAACCATCTGGGCAACTG +
Preference number: 5 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQWRSRI*KPSGQL
Trigger: CAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCA...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS GCA 90 bp CAGACTCCTTTCAGAATCATTCCCTGGCTGCAATTTATAGCTACATaGAAGCTACTGGTCAGGCATCGTAATAGATGCTCTGTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: QTPFRIIPWLQFIAT*KLLVRHRNRCSVQE
Trigger: CTCTTGCACAGAGCATCTATTACGATGCCTGACCAGTAGCTTGCATGTAGCTATAAATTGCAGCCAGGGAATGATTCTGAAAGGAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS-3UTR CAA 90 bp ACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGAGCATGTTGGGTGACTaGAGATCCCTGTGGATAATC +
Preference number: 5 (lower is better)
Translates to: TTLAFLLPCCLLNIRNGVSMLGD*RSLWII
Trigger: GATTATCCACAGGGATCTCAAGTCACCCAACATGCT...CACCCCATTCCTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCCAGGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCAGCCCCATCTTTCTGTaGATTATGTGGCGCATATAT +
Preference number: 5 (lower is better)
Translates to: TSDKVRSPRLYLNHVWYPSPIFL*IMWRIY
Trigger: ATATATGCGCCACATAATCAACAGAAAGATGGGGCT...GGGGTACCATACATGGTTAAGATAAAGCCTTGGGCTCCGGACTTTATCTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGGGATCAGTCTGGCTTTTCTATTGCCTaGTTGCTTGCTGAATATAAG +
Preference number: 5 (lower is better)
Translates to: TAASVPRVYQVNWSGDQSGFSIA*LLAEYK
Trigger: CTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCC...AGACTGATCCCCTGACCAATTCACCTGATAAACTCTAGGGACACTGGCAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS CCA 90 bp TTTAAAGGAATTTTTCAGCCGTCATCTGGTTGTTTGACGACTAGGTaGTTTAGGCATAGAAAGGGTGACATGCTCAGAGACACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: FKGIFQPSSGCLTTR*FRHRKGDMLRDTCS
Trigger: GCTGCAAGTGTCTCTGAGCATGTCACCCTTTCTATGCCTAAACCACCTAGTCGTCAAACAACCAGATGACGGCTGAAAAATTCCTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547035.5
CDS-3UTR CAA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGAGCTTTCGCAAGTGCTaGATGTCGGTTTCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQSFRKC*MSVSLR
Trigger: CCTCAAAGAAACCGACATCAAGCACTTGCGAAAGCT...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGTTGAAAGTGATGATGTaGGGGTGCTTCAGCTTTCGC +
Preference number: 5 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQLKVMM*GCFSFR
Trigger: GCGAAAGCTGAAGCACCCCAACATCATCACTTTCAA...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGGGCACATTCCTCTTCTaGATAAGCTTCTCCATTGTG +
Preference number: 5 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGGTFLF*ISFSIV
Trigger: CACAATGGAGAAGCTTATCAAGAAGAGGAATGTGCC...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTAAGCAAAGACTCCGTCTaGAGGATATCTGGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLSKDSV*RISGLL
Trigger: CAAAAGGCCAGATATCCTCAAGACGGAGTCTTTGCT...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp AAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTAAAGGCATCAACGCTGTaGGAGTTGTCCAATTCAGTG +
Preference number: 5 (lower is better)
Translates to: KLVPKRLRIRLSEDLPVLKASTL*ELSNSV
Trigger: CACTGAATTGGACAACTCCAACAGCGTTGATGCCTT...TAGGACAGGTAAGTCCTCGGAAAGTCTAATCCTCAATCTTTTGGGCACAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS GCA 90 bp CAATTTATAGCTACATGCAAGCTACTGGTCAGGCATCGTAATAGATaGTCTGTGCAAGAGGCTTCTGAAATTCCACCACGTGGATATTTG +
Preference number: 5 (lower is better)
Translates to: QFIATCKLLVRHRNR*SVQEASEIPPRGYL
Trigger: CAAATATCCACGTGGTGGAATTTCAGAAGCCTCTTGCACAGAGCATCTATTACGATGCCTGACCAGTAGCTTGCATGTAGCTATAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS-3UTR CAA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTGAGGCCACCTCTGGCTaGATGTCAGCTCTACTTCAC +
Preference number: 5 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSEATSG*MSALLH
Trigger: GTGAAGTAGAGCTGACATCAAGCCAGAGGTGGCCTC...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGCTATTGCCTTGTTGCTaGCTGAATATAAGGAATGGG +
Preference number: 5 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGLLPCC*LNIRNG
Trigger: CCCATTCCTTATATTCAGCAAGCAACAAGGCAATAG...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp GACATACATGGCATACACATTAAGCAGTTGATCATATGTCTGACTGGGTTCCAGGGAATGTTGGTCCCCTaGTTCAGGCTTGCATATTTT +
Preference number: 5 (lower is better)
Translates to: DIHGIHIKQLIICLTGFQGMLVP*FRLAYF
Trigger: AAAATATGCAAGCCTGAACAAGGGGACCAACATTCC...CTGGAACCCAGTCAGACATATGATCAACTGCTTAATGTGTATGCCATGTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp CTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACCCTCAACAGCTGGGGGCTTTTCTATTGCCTaGTTGCTTGCTGAATATAAG +
Preference number: 5 (lower is better)
Translates to: LNHVWYPIHSSRKPSTAGGFSIA*LLAEYK
Trigger: CTTATATTCAGCAAGCAACAAGGCAATAGAAAAGCC...CCCAGCTGTTGAGGGTTTTCTTGATGAATGAATGGGGTACCATACATGGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTAGCATGTTGGGTGACTaGAGATCCCTGTGGATAATC +
Preference number: 5 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSSMLGD*RSLWII
Trigger: GATTATCCACAGGGATCTCAAGTCACCCAACATGCT...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS-3UTR CAA 90 bp ATGGAAGCCTTTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTATACACATTAAGCAGTaGATCATATGTCTGACTGGG +
Preference number: 5 (lower is better)
Translates to: MEAFIPVKMFSSILPLPSIHIKQ*IICLTG
Trigger: CCCAGTCAGACATATGATCAACTGCTTAATGTGTAT...AGATGGAAGTGGTAAAATAGAAGAAAACATCTTAACCGGAATAAAGGCTTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267079.6
ENST00000547488.6
CDS GCA 72 bp TGCCCTCCACCGGACCCGGGGCGCTGTCACAGGCGATaGTCGTGCGGTGTCCGGATGCACGGGTGTCAGCTT +
Preference number: 6 (lower is better)
Translates to: CPPPDPGRCHRR*SCGVRMHGCQL
Trigger: AAGCTGACACCCGTGCATCCGGACACCGCACGAGCATCGCCTGTGACAGCGCCCCGGGTCCGGTGGAGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267079.6
CDS CCA 72 bp GCCATCGCCTCTGGCCCCTGGTATGATGGTGAACACTaGGCCCTCCTTCCCGGCCGTCACGTGGCGCGTGGC +
Preference number: 6 (lower is better)
Translates to: AIASGPWYDGEH*ALLPGRHVARG
Trigger: GCCACGCGCCACGTGACGGCCGGGAAGGAGGGCCCAGTGTTCACCATCATACCAGGGGCCAGAGGCGATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547803.1
CDS GCA 72 bp CCACCGGACCCGGGGCGCTGTCACAGGCGATGCTCGTaGGGTGTCCGGATGCACGGGTGTCAGCTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: PPDPGRCHRRCS*GVRMHGCQLQL
Trigger: AAGCTGAAGCTGACACCCGTGCATCCGGACACCGCACGAGCATCGCCTGTGACAGCGCCCCGGGTCCGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267079.6
CDS CCA 72 bp CGGGTCTCATGGAGGCAAGCCATCGCCTCTGGCCCCTaGTATGATGGTGAACACTGGGCCCTCGGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: RVSWRQAIASGP*YDGEHWALGGS
Trigger: GGAGCCCCCGAGGGCCCAGTGTTCACCATCATACCAGGGGCCAGAGGCGATGGCTTGCCTCCATGAGACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267079.6
ENST00000547151.1
ENST00000547488.6
ENST00000551895.1
CDS GCA 72 bp TACCTGACTTCGGGTGACGGCAGCCCTGTACAGCAGTaGAGCTGGGGTCAAGTGCTGGGACCCAGCCCGGCT +
Preference number: 6 (lower is better)
Translates to: YLTSGDGSPVQQ*SWGQVLGPSPA
Trigger: AGCCGGGCTGGGTCCCAGCACTTGACCCCAGCTGCACTGCTGTACAGGGCTGCCGTCACCCGAAGTCAGGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 72 bp CGGGTCTCATGGAGGCAAGCCATCGCCTCTGGCCCCTaGTATGATGGTGAACACTGGGCCCTCCTTCCCGGC +
Preference number: 6 (lower is better)
Translates to: RVSWRQAIASGP*YDGEHWALLPG
Trigger: GCCGGGAAGGAGGGCCCAGTGTTCACCATCATACCAGGGGCCAGAGGCGATGGCTTGCCTCCATGAGACCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547803.1
CDS CCA 72 bp TCTGGCACTGCAGTCGCACCTCGTCAGCTCGAACTCTaGATGCCCGACTCTCAGGTGACCCAGCTGCTCCCC +
Preference number: 6 (lower is better)
Translates to: SGTAVAPRQLEL*MPDSQVTQLLP
Trigger: GGGGAGCAGCTGGGTCACCTGAGAGTCGGGCATCCAGAGTTCGAGCTGACGAGGTGCGACTGCAGTGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547151.1
ENST00000547488.6
ENST00000547803.1
ENST00000551895.1
ENST00000552365.1
CDS TCA 72 bp CGATGCCCATGGACCAGTCAACCAGTAAGGAGGGGGTaGCAGGGCGGCCAGCCCGCAGTACCTCATACAGCT +
Preference number: 6 (lower is better)
Translates to: RCPWTSQPVRRG*QGGQPAVPHTA
Trigger: AGCTGTATGAGGTACTGCGGGCTGGCCGCCCTGTCACCCCCTCCTTACTGGTTGACTGGTCCATGGGCATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267079.6
ENST00000547020.1
ENST00000547035.5
ENST00000547488.6
ENST00000552365.1
CDS TCA 72 bp GTACCTCATACAGCTGGCCCTGGGCGCAGAACTCCATaGGGATGCAGTAGCAGGGAGCCTGGGTGCACACAC +
Preference number: 6 (lower is better)
Translates to: VPHTAGPGRRTP*GCSSREPGCTH
Trigger: GTGTGTGCACCCAGGCTCCCTGCTACTGCATCCTCATGGAGTTCTGCGCCCAGGGCCAGCTGTATGAGGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267079.6
ENST00000547020.1
ENST00000547035.5
ENST00000547488.6
ENST00000552365.1
CDS CCA 72 bp CAGCCAAAGAGGCCCTCAAGGAAGCCACTGCCACTCTaGCACTGCAGTCGCACCTCGTCAGCTCGAACTCTG +
Preference number: 6 (lower is better)
Translates to: QPKRPSRKPLPL*HCSRTSSARTL
Trigger: CAGAGTTCGAGCTGACGAGGTGCGACTGCAGTGCCAGAGTGGCAGTGGCTTCCTTGAGGGCCTCTTTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547151.1
ENST00000547488.6
ENST00000547803.1
ENST00000551895.1
ENST00000552365.1
CDS CCA 72 bp GCTGTTGTGCCACTCACCCGCTCTCTGAGAAGTTCCTaGTGTGGAATGGGCAGGGAGCTGGGTTCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: AVVPLTRSLRSS*CGMGRELGSGP
Trigger: TGGCCCTGAACCCAGCTCCCTGCCCATTCCACACCAGGAACTTCTCAGAGAGCGGGTGAGTGGCACAACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS TCA 72 bp GCTTGGGAGCCTTCCCATACTTTACCTGACTTCGGGTaGCGGCAGCCCTGTACAGCAGTGCAGCTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: AWEPSHTLPDFG*RQPCTAVQLGS
Trigger: TGACCCCAGCTGCACTGCTGTACAGGGCTGCCGTCACCCGAAGTCAGGTAAAGTATGGGAAGGCTCCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 72 bp GGCTTCAGCAGGCCTGGGCACCTCCGCTCTAAAGCTTaGTCTCGCCTAAAGATCCAGGCACCTTCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: GFSRPGHLRSKA*SRLKIQAPSQL
Trigger: CAGCTGAGAAGGTGCCTGGATCTTTAGGCGAGAGCAAGCTTTAGAGCGGAGGTGCCCAGGCCTGCTGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 72 bp AAGCCCCCAAAGGAAGGAGAGGGTGTTCGGGTCTCATaGAGGCAAGCCATCGCCTCTGGCCCCTGGTATGAT +
Preference number: 6 (lower is better)
Translates to: KPPKEGEGVRVS*RQAIASGPWYD
Trigger: ATCATACCAGGGGCCAGAGGCGATGGCTTGCCTCCATGAGACCCGAACACCCTCTCCTTCCTTTGGGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547151.1
ENST00000547488.6
ENST00000547803.1
ENST00000548565.1
ENST00000551895.1
ENST00000552365.1
CDS CCA 72 bp GGAGCCTGGGTGCACACACCCCTGGGAGCCAAACAATaGTATGAAGGCCTCAGCTGGCTCAGCATTCACCTG +
Preference number: 6 (lower is better)
Translates to: GAWVHTPLGAKQ*YEGLSWLSIHL
Trigger: CAGGTGAATGCTGAGCCAGCTGAGGCCTTCATACCATTGTTTGGCTCCCAGGGGTGTGTGCACCCAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 90 bp TATCCCAGCCCAGACCATCCTTACCAGCACTGGCGAAGCAGGATCTaGAAACCATCTGGGCAACTGGAGGGCACGGGCAGATGGAGACTG +
Preference number: 6 (lower is better)
Translates to: YPSPDHPYQHWRSRI*KPSGQLEGTGRWRL
Trigger: CAGTCTCCATCTGCCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGTGCTGGTAAGGATGGTCTGGGCTGGGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 72 bp CTTCCTGCTGCTGCTTGTGCTCAGTGGAGTAGGCTTTaGCAATCATGGTCCAGACAGGGCGCAGGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: LPAAACAQWSRL*QSWSRQGAGSQ
Trigger: TTGGCTGCCTGCGCCCTGTCTGGACCATGATTGGCAAAGCCTACTCCACTGAGCACAAGCAGCAGCAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547151.1
ENST00000547488.6
ENST00000551895.1
ENST00000552365.1
CDS GCA 72 bp TGCTCAGGACACTTATCCCAGAGGCACAGACTGGGGTaGTGGGTTCACAGTAGCCCCGCTGGAGGTAACACT +
Preference number: 6 (lower is better)
Translates to: CSGHLSQRHRLG*WVHSSPAGGNT
Trigger: AGTGTTACCTCCAGCGGGGCTACTGTGAACCCAGCACCCCAGTCTGTGCCTCTGGGATAAGTGTCCTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS CCA 72 bp TGCCCACCAAGGGGTACCACATCTCGAAGTACACACTaGGTAGGCGTCAGGTCCTTCTCGGGAGTGCAGTCA +
Preference number: 6 (lower is better)
Translates to: CPPRGTTSRSTH*VGVRSFSGVQS
Trigger: TGACTGCACTCCCGAGAAGGACCTGACGCCTACCCAGTGTGTACTTCGAGATGTGGTACCCCTTGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547035.5
ENST00000547488.6
ENST00000547803.1
ENST00000551895.1
CDS CCA 72 bp CGGGTCTCATGGAGGCAAGCCATCGCCTCTGGCCCCTaGTATGATGGTGAACACTGGGCCTTGGAATTCACT +
Preference number: 6 (lower is better)
Translates to: RVSWRQAIASGP*YDGEHWALEFT
Trigger: AGTGAATTCCAAGGCCCAGTGTTCACCATCATACCAGGGGCCAGAGGCGATGGCTTGCCTCCATGAGACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548565.1
CDS CAA 72 bp CCAGACCATCCTTACCAGCACTGGCGAAGCAGGATCTaGAAACCATCTGGGCAACTGGAGGGCACGGGCAGA +
Preference number: 6 (lower is better)
Translates to: PDHPYQHWRSRI*KPSGQLEGTGR
Trigger: TCTGCCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGTGCTGGTAAGGATGGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547020.1
ENST00000548690.1
CDS CAA 90 bp GTCAGGTCCTTCTCGGGAGTGCAGTCAGAAGTGTCTGGGTCCAGCTaGCGCATGGATGCCTCACTTAGGGTAGACACAAAGCCCCCAAAG +
Preference number: 6 (lower is better)
Translates to: VRSFSGVQSEVSGSS*RMDASLRVDTKPPK
Trigger: CTTTGGGGGCTTTGTGTCTACCCTAAGTGAGGCATCCATGCGCAAGCTGGACCCAGACACTTCTGACTGCACTCCCGAGAAGGACCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547151.1
ENST00000547488.6
ENST00000547803.1
ENST00000551895.1
ENST00000552365.1
CDS CAA 90 bp ACCACGCCAAAGGACCAGATGTCGACCTTCTCAGACACAGGTTCATaGCGGATCACCTCAGGGGCCATCCAGGCTACTGTCCCTGCAAAG +
Preference number: 6 (lower is better)
Translates to: TTPKDQMSTFSDTGS*RITSGAIQATVPAK
Trigger: CTTTGCAGGGACAGTAGCCTGGATGGCCCCTGAGGTGATCCGCAATGAACCTGTGTCTGAGAAGGTCGACATCTGGTCCTTTGGCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267079.6
ENST00000547020.1
ENST00000547035.5
ENST00000547488.6
ENST00000548690.1
ENST00000552365.1
CDS TCA 72 bp CAGACCATCCTTACCAGCACTGGCGAAGCAGGATCTTaGAACCATCTGGGCAACTGGAGGGCACGGGCAGAT +
Preference number: 6 (lower is better)
Translates to: QTILTSTGEAGS*NHLGNWRARAD
Trigger: ATCTGCCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGTGCTGGTAAGGATGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547020.1
ENST00000548690.1
CDS TCA 72 bp GCATGGTTTGGAAGCCGGGAGAAGGCCACACTGACTTaGGTGGGTCACCTGCATGCACATCTGTTGCTCCCT +
Preference number: 6 (lower is better)
Translates to: AWFGSREKATLT*VGHLHAHLLLP
Trigger: AGGGAGCAACAGATGTGCATGCAGGTGACCCACTCAAGTCAGTGTGGCCTTCTCCCGGCTTCCAAACCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 72 bp TCAGGACACTTATCCCAGAGGCACAGACTGGGGTGCTaGGTTCACAGTAGCCCCGCTGGAGGTAACACTTGT +
Preference number: 6 (lower is better)
Translates to: SGHLSQRHRLGC*VHSSPAGGNTC
Trigger: ACAAGTGTTACCTCCAGCGGGGCTACTGTGAACCCAGCACCCCAGTCTGTGCCTCTGGGATAAGTGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS CCA 72 bp CCAGGATTTCCTCAAAGGGGACCTCCCAAAGGTCTGTaGGCAGGAGGCACAGTGCCACAAGCCTCAGAAAGA +
Preference number: 6 (lower is better)
Translates to: PGFPQRGPPKGL*AGGTVPQASER
Trigger: TCTTTCTGAGGCTTGTGGCACTGTGCCTCCTGCCCACAGACCTTTGGGAGGTCCCCTTTGAGGAAATCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 72 bp GCCCAGTATCCCAGCCCAGACCATCCTTACCAGCACTaGCGAAGCAGGATCTTGAAACCATCTGGGCAACTG +
Preference number: 6 (lower is better)
Translates to: AQYPSPDHPYQH*RSRILKPSGQL
Trigger: CAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGTGCTGGTAAGGATGGTCTGGGCTGGGATACTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp GGGGCCATCCAGGCTACTGTCCCTGCAAAGGACATCTaGGTGCTCTTGTCACTCAGCTCCTTGGAAGTGCCA +
Preference number: 6 (lower is better)
Translates to: GAIQATVPAKDI*VLLSLSSLEVP
Trigger: TGGCACTTCCAAGGAGCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAGGGACAGTAGCCTGGATGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267079.6
ENST00000547020.1
ENST00000547035.5
ENST00000547488.6
ENST00000548690.1
ENST00000552365.1
CDS CAA 72 bp CGTGGTTTGCTATTCCAGCACTGGCGAAGCAGGATCTaGAAACCATCTGGGCAACTGGAGGGCACGGGCAGA +
Preference number: 6 (lower is better)
Translates to: RGLLFQHWRSRI*KPSGQLEGTGR
Trigger: TCTGCCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGTGCTGGAATAGCAAACCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547488.6
ENST00000552365.1
CDS TCA 72 bp GTGGTTTGCTATTCCAGCACTGGCGAAGCAGGATCTTaGAACCATCTGGGCAACTGGAGGGCACGGGCAGAT +
Preference number: 6 (lower is better)
Translates to: VVCYSSTGEAGS*NHLGNWRARAD
Trigger: ATCTGCCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGTGCTGGAATAGCAAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547488.6
ENST00000552365.1
CDS TCA 72 bp CTGGGTGCACACACCCCTGGGAGCCAAACAATGGTATaGAGGCCTCAGCTGGCTCAGCATTCACCTGATTCA +
Preference number: 6 (lower is better)
Translates to: LGAHTPGSQTMV*RPQLAQHSPDS
Trigger: TGAATCAGGTGAATGCTGAGCCAGCTGAGGCCTTCATACCATTGTTTGGCTCCCAGGGGTGTGTGCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS TCA 72 bp AAGGGAAAGAGCTTGGGAGCCTTCCCATACTTTACCTaGCTTCGGGTGACGGCAGCCCTGTACAGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: KGKSLGAFPYFT*LRVTAALYSSA
Trigger: TGCACTGCTGTACAGGGCTGCCGTCACCCGAAGTCAGGTAAAGTATGGGAAGGCTCCCAAGCTCTTTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS TCA 72 bp ATCTGCTTTTTGCTGTTGTGCCACTCACCCGCTCTCTaGGAAGTTCCTGGTGTGGAATGGGCAGGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: ICFLLLCHSPAL*EVPGVEWAGSW
Trigger: CCAGCTCCCTGCCCATTCCACACCAGGAACTTCTCAGAGAGCGGGTGAGTGGCACAACAGCAAAAAGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 72 bp TTTAGGCATAGAAAGGGTGACATGCTCAGAGACACTTaGAGCCAGCCGAGCCTCCCTCCAGTTCACCAGGCT +
Preference number: 6 (lower is better)
Translates to: FRHRKGDMLRDT*SQPSLPPVHQA
Trigger: AGCCTGGTGAACTGGAGGGAGGCTCGGCTGGCTGCAAGTGTCTCTGAGCATGTCACCCTTTCTATGCCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547035.5
CDS CCA 72 bp GGGCCATCCAGGCTACTGTCCCTGCAAAGGACATCTTaGTGCTCTTGTCACTCAGCTCCTTGGAAGTGCCAA +
Preference number: 6 (lower is better)
Translates to: GPSRLLSLQRTS*CSCHSAPWKCQ
Trigger: TTGGCACTTCCAAGGAGCTGAGTGACAAGAGCACCAAGATGTCCTTTGCAGGGACAGTAGCCTGGATGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267079.6
ENST00000547020.1
ENST00000547035.5
ENST00000547488.6
ENST00000548690.1
ENST00000552365.1
CDS CCA 72 bp ATTCCAGCACTGGCGAAGCAGGATCTTGAAACCATCTaGGCAACTGGAGGGCACGGGCAGATGGAGACTGTT +
Preference number: 6 (lower is better)
Translates to: IPALAKQDLETI*ATGGHGQMETV
Trigger: AACAGTCTCCATCTGCCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGTGCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547488.6
ENST00000552365.1
CDS CCA 72 bp TTACCAGCACTGGCGAAGCAGGATCTTGAAACCATCTaGGCAACTGGAGGGCACGGGCAGATGGAGACTGTT +
Preference number: 6 (lower is better)
Translates to: LPALAKQDLETI*ATGGHGQMETV
Trigger: AACAGTCTCCATCTGCCCGTGCCCTCCAGTTGCCCAGATGGTTTCAAGATCCTGCTTCGCCAGTGCTGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547020.1
ENST00000548690.1
CDS CCA 72 bp GGCCTCAGCTGGCTCAGCATTCACCTGATTCATACCTaGAACCCCCATTCCCACCCATTCCACCTATGGATC +
Preference number: 6 (lower is better)
Translates to: GLSWLSIHLIHT*NPHSHPFHLWI
Trigger: GATCCATAGGTGGAATGGGTGGGAATGGGGGTTCCAGGTATGAATCAGGTGAATGCTGAGCCAGCTGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 72 bp CCCCTGGGAGCCAAACAATGGTATGAAGGCCTCAGCTaGCTCAGCATTCACCTGATTCATACCTGGAACCCC +
Preference number: 6 (lower is better)
Translates to: PLGAKQWYEGLS*LSIHLIHTWNP
Trigger: GGGGTTCCAGGTATGAATCAGGTGAATGCTGAGCCAGCTGAGGCCTTCATACCATTGTTTGGCTCCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp AAGGACCAGATGTCGACCTTCTCAGACACAGGTTCATaGCGGATCACCTCAGGGGCCATCCAGGCTACTGTC +
Preference number: 6 (lower is better)
Translates to: KDQMSTFSDTGS*RITSGAIQATV
Trigger: GACAGTAGCCTGGATGGCCCCTGAGGTGATCCGCAATGAACCTGTGTCTGAGAAGGTCGACATCTGGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267079.6
ENST00000547020.1
ENST00000547035.5
ENST00000547488.6
ENST00000548690.1
ENST00000552365.1
CDS CAA 90 bp ATGTTGGGGTGCTTCAGCTTTCGCAAGTGCTTGATGTCGGTTTCTTaGAGGTCTCGCACCTTCTTCACAGCCACCTCCTCCCCGTGGAAG +
Preference number: 6 (lower is better)
Translates to: MLGCFSFRKCLMSVS*RSRTFFTATSSPWK
Trigger: CTTCCACGGGGAGGAGGTGGCTGTGAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAAGCACTTGCGAAAGCTGAAGCACCCCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267079.6
ENST00000547020.1
ENST00000547035.5
ENST00000547151.1
ENST00000547488.6
ENST00000552365.1
CDS CAA 90 bp TTTCATGGAGGGAGGGAAGCTGGGGGCCGCAAGGCATCAACGCTGTaGGAGTTGTCCAATTCAGTGCTGTCACAGTCTGAGTCCTCAGAA +
Preference number: 6 (lower is better)
Translates to: FHGGREAGGRKASTL*ELSNSVLSQSESSE
Trigger: TTCTGAGGACTCAGACTGTGACAGCACTGAATTGGACAACTCCAACAGCGTTGATGCCTTGCGGCCCCCAGCTTCCCTCCCTCCATGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267079.6
ENST00000547020.1
ENST00000547035.5
ENST00000547488.6
ENST00000551511.5
CDS CCA 72 bp CTCAAAGGTGAGGGGCTCACTACAGCCCTTCTGAGATaGGACTGTCACTTGGAAGAGGTTTCTGAGATGGCC +
Preference number: 6 (lower is better)
Translates to: LKGEGLTTALLR*DCHLEEVSEMA
Trigger: GGCCATCTCAGAAACCTCTTCCAAGTGACAGTCCCATCTCAGAAGGGCTGTAGTGAGCCCCTCACCTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp TTCTCGGGAGTGCAGTCAGAAGTGTCTGGGTCCAGCTaGCGCATGGATGCCTCACTTAGGGTAGACACAAAG +
Preference number: 6 (lower is better)
Translates to: FSGVQSEVSGSS*RMDASLRVDTK
Trigger: CTTTGTGTCTACCCTAAGTGAGGCATCCATGCGCAAGCTGGACCCAGACACTTCTGACTGCACTCCCGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547151.1
ENST00000547488.6
ENST00000547803.1
ENST00000551895.1
ENST00000552365.1
CDS CAA 72 bp GGAGCCTGGGTGCACACACCCTTGAAAGTGATGATGTaGGGGTGCTTCAGCTTTCGCAAGTGCTTGATGTCG +
Preference number: 6 (lower is better)
Translates to: GAWVHTPLKVMM*GCFSFRKCLMS
Trigger: CGACATCAAGCACTTGCGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGGGTGTGTGCACCCAGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547488.6
ENST00000552365.1
CDS CAA 72 bp AGCCCCTGCCCTGGACCTCACTTGAAAGTGATGATGTaGGGGTGCTTCAGCTTTCGCAAGTGCTTGATGTCG +
Preference number: 6 (lower is better)
Translates to: SPCPGPHLKVMM*GCFSFRKCLMS
Trigger: CGACATCAAGCACTTGCGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGTGAGGTCCAGGGCAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 90 bp CCAACACCCAGCCCCTGCCCTGGACCTCACTTGAAAGTGATGATGTaGGGGTGCTTCAGCTTTCGCAAGTGCTTGATGTCGGTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: PTPSPCPGPHLKVMM*GCFSFRKCLMSVSL
Trigger: CAAAGAAACCGACATCAAGCACTTGCGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGTGAGGTCCAGGGCAGGGGCTGGGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 90 bp GGGTCACCTGCATGCACATCTGTTGCTCCCTGCTTGCTTACTCACTaGGGTGACTTGAGATCCCTGTGGATAATCTTGTGCAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: GSPACTSVAPCLLTH*GDLRSLWIILCRCR
Trigger: CCTGCACCTGCACAAGATTATCCACAGGGATCTCAAGTCACCCAAGTGAGTAAGCAAGCAGGGAGCAACAGATGTGCATGCAGGTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS TCA 72 bp AATGGTATGAAGGCCTCAGCTGGCTCAGCATTCACCTaGTTCATACCTGGAACCCCCATTCCCACCCATTCC +
Preference number: 6 (lower is better)
Translates to: NGMKASAGSAFT*FIPGTPIPTHS
Trigger: GGAATGGGTGGGAATGGGGGTTCCAGGTATGAATCAGGTGAATGCTGAGCCAGCTGAGGCCTTCATACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 72 bp TTGAGTGGGTCACCTGCATGCACATCTGTTGCTCCCTaGTTGCTTACTCACTTGGGTGACTTGAGATCCCTG +
Preference number: 6 (lower is better)
Translates to: LSGSPACTSVAP*LLTHLGDLRSL
Trigger: CAGGGATCTCAAGTCACCCAAGTGAGTAAGCAAGCAGGGAGCAACAGATGTGCATGCAGGTGACCCACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp TGCTTCAGCTTTCGCAAGTGCTTGATGTCGGTTTCTTaGAGGTCTCGCACCTTCTTCACAGCCACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: CFSFRKCLMSVS*RSRTFFTATSS
Trigger: GGAGGAGGTGGCTGTGAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAAGCACTTGCGAAAGCTGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267079.6
ENST00000547020.1
ENST00000547035.5
ENST00000547151.1
ENST00000547488.6
ENST00000552365.1
CDS CAA 90 bp CCCTTGAAAGTGATGATGTTGGGGTGCTTCAGCTTTCGCAAGTGCTaGATGTCGGTTTCTTTGAGGTCTCGCACCTTCTTCACAGCCACC +
Preference number: 6 (lower is better)
Translates to: PLKVMMLGCFSFRKC*MSVSLRSRTFFTAT
Trigger: GGTGGCTGTGAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAAGCACTTGCGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547488.6
ENST00000552365.1
CDS CAA 90 bp GGTAACACTTGTGGCTCCGTTTCCCATGGCCCTCCAAATTGCACCTaGAGCCATCTTAGGAAATCTGATACACTTGGGCTTCCTCTCAGG +
Preference number: 6 (lower is better)
Translates to: GNTCGSVSHGPPNCT*SHLRKSDTLGLPLR
Trigger: CCTGAGAGGAAGCCCAAGTGTATCAGATTTCCTAAGATGGCTCAAGGTGCAATTTGGAGGGCCATGGGAAACGGAGCCACAAGTGTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS TCA 72 bp GTGGCTCCGTTTCCCATGGCCCTCCAAATTGCACCTTaGGCCATCTTAGGAAATCTGATACACTTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: VAPFPMALQIAP*AILGNLIHLGF
Trigger: GAAGCCCAAGTGTATCAGATTTCCTAAGATGGCTCAAGGTGCAATTTGGAGGGCCATGGGAAACGGAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS TCA 72 bp CCTTCTGAGATGGGACTGTCACTTGGAAGAGGTTTCTaGGATGGCCACATGGACCTAGGGCATGGTTTGGAA +
Preference number: 6 (lower is better)
Translates to: PSEMGLSLGRGF*DGHMDLGHGLE
Trigger: TTCCAAACCATGCCCTAGGTCCATGTGGCCATCTCAGAAACCTCTTCCAAGTGACAGTCCCATCTCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp TCTGTTGCTCCCTGCTTGCTTACTCACTTGGGTGACTaGAGATCCCTGTGGATAATCTTGTGCAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: SVAPCLLTHLGD*RSLWIILCRCR
Trigger: CCTGCACCTGCACAAGATTATCCACAGGGATCTCAAGTCACCCAAGTGAGTAAGCAAGCAGGGAGCAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 90 bp CACTTGAAAGTGATGATGTTGGGGTGCTTCAGCTTTCGCAAGTGCTaGATGTCGGTTTCTTTGAGGTCTCGCACCTTCTTCACAGCCACC +
Preference number: 6 (lower is better)
Translates to: HLKVMMLGCFSFRKC*MSVSLRSRTFFTAT
Trigger: GGTGGCTGTGAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAAGCACTTGCGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 90 bp ACTGACTTGAGTGGGTCACCTGCATGCACATCTGTTGCTCCCTGCTaGCTTACTCACTTGGGTGACTTGAGATCCCTGTGGATAATCTTG +
Preference number: 6 (lower is better)
Translates to: TDLSGSPACTSVAPC*LTHLGDLRSLWIIL
Trigger: CAAGATTATCCACAGGGATCTCAAGTCACCCAAGTGAGTAAGCAAGCAGGGAGCAACAGATGTGCATGCAGGTGACCCACTCAAGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 72 bp TGGGTGCACACACCCTTGAAAGTGATGATGTTGGGGTaGTTCAGCTTTCGCAAGTGCTTGATGTCGGTTTCT +
Preference number: 6 (lower is better)
Translates to: WVHTPLKVMMLG*FSFRKCLMSVS
Trigger: AGAAACCGACATCAAGCACTTGCGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGGGTGTGTGCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267079.6
ENST00000547035.5
ENST00000547488.6
ENST00000552365.1
CDS GCA 72 bp TGCCCTGGACCTCACTTGAAAGTGATGATGTTGGGGTaGTTCAGCTTTCGCAAGTGCTTGATGTCGGTTTCT +
Preference number: 6 (lower is better)
Translates to: CPGPHLKVMMLG*FSFRKCLMSVS
Trigger: AGAAACCGACATCAAGCACTTGCGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGTGAGGTCCAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 72 bp GGTTACCTGAGCAGCTCCCTCTCCTTGAGTTCCAGCTaGAACATGAGGGCATTAAGTTCCATATACAGGTTG +
Preference number: 6 (lower is better)
Translates to: GYLSSSLSLSSS*NMRALSSIYRL
Trigger: CAACCTGTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 72 bp CCAATTCAGTGCTGTCACAGTCTGAGTCCTCAGAATTaGGAGGGCCCTGTGAGAAAGAGTAGAAATGGAGTG +
Preference number: 6 (lower is better)
Translates to: PIQCCHSLSPQN*EGPVRKSRNGV
Trigger: CACTCCATTTCTACTCTTTCTCACAGGGCCCTCCCAATTCTGAGGACTCAGACTGTGACAGCACTGAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp TGTGGCTCCGTTTCCCATGGCCCTCCAAATTGCACCTaGAGCCATCTTAGGAAATCTGATACACTTGGGCTT +
Preference number: 6 (lower is better)
Translates to: CGSVSHGPPNCT*SHLRKSDTLGL
Trigger: AAGCCCAAGTGTATCAGATTTCCTAAGATGGCTCAAGGTGCAATTTGGAGGGCCATGGGAAACGGAGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552365.1
CDS CAA 72 bp GCATGCACATCTGTTGCTCCCTGCTTGCTTACTCACTaGGGTGACTTGAGATCCCTGTGGATAATCTTGTGC +
Preference number: 6 (lower is better)
Translates to: ACTSVAPCLLTH*GDLRSLWIILC
Trigger: GCACAAGATTATCCACAGGGATCTCAAGTCACCCAAGTGAGTAAGCAAGCAGGGAGCAACAGATGTGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp TGCCATATTGGAACCACAGTACTCATGTCCCACCTTTaGCTATGGGGTGACAGCTTCTGTGGCACATTCCTC +
Preference number: 6 (lower is better)
Translates to: CHIGTTVLMSHL*LWGDSFCGTFL
Trigger: GAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGTGGGACATGAGTACTGTGGTTCCAATATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS TCA 72 bp GCCTTTCAGTTTAAAATCATTTGGGACACTCAAAGGTaGGGGGCTCACTACAGCCCTTCTGAGATGGGACTG +
Preference number: 6 (lower is better)
Translates to: AFQFKIIWDTQR*GAHYSPSEMGL
Trigger: CAGTCCCATCTCAGAAGGGCTGTAGTGAGCCCCTCACCTTTGAGTGTCCCAAATGATTTTAAACTGAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS TCA 72 bp GGGGTCCTTTCCTTCTGTGTTCTAAGGTTGTTTACTTaGGGCTCAACCAACCATGCTTGGTGGTTATGCTGC +
Preference number: 6 (lower is better)
Translates to: GVLSFCVLRLFT*GSTNHAWWLCC
Trigger: GCAGCATAACCACCAAGCATGGTTGGTTGAGCCTCAAGTAAACAACCTTAGAACACAGAAGGAAAGGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 72 bp TCTGCTTACAGCTCTCCCTGTTCAATATCTGCTTTTTaGTGTTGTGCCACTCACCCGCTCTCTGAGAAGTTC +
Preference number: 6 (lower is better)
Translates to: SAYSSPCSISAF*CCATHPLSEKF
Trigger: GAACTTCTCAGAGAGCGGGTGAGTGGCACAACAGCAAAAAGCAGATATTGAACAGGGAGAGCTGTAAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 72 bp GCTACATGCAAGCTACTGGTCAGGCATCGTAATAGATaGTCTGTGCAAGAGGCTTCTGAAATTCCACCACGT +
Preference number: 6 (lower is better)
Translates to: ATCKLLVRHRNR*SVQEASEIPPR
Trigger: ACGTGGTGGAATTTCAGAAGCCTCTTGCACAGAGCATCTATTACGATGCCTGACCAGTAGCTTGCATGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 90 bp AGATGCTCTGTGCAAGAGGCTTCTGAAATTCCACCACGTGGATATTaGCTCTTTATGGTACTTTCTGGCCTGTGCAGCTGTCTCCCCAAA +
Preference number: 6 (lower is better)
Translates to: RCSVQEASEIPPRGY*LFMVLSGLCSCLPK
Trigger: TTTGGGGAGACAGCTGCACAGGCCAGAAAGTACCATAAAGAGCAAATATCCACGTGGTGGAATTTCAGAAGCCTCTTGCACAGAGCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 90 bp GGGCCCTGGCTTTTTAAAGGAATTTTTCAGCCGTCATCTGGTTGTTaGACGACTAGGTGGTTTAGGCATAGAAAGGGTGACATGCTCAGA +
Preference number: 6 (lower is better)
Translates to: GPWLFKGIFQPSSGC*TTRWFRHRKGDMLR
Trigger: TCTGAGCATGTCACCCTTTCTATGCCTAAACCACCTAGTCGTCAAACAACCAGATGACGGCTGAAAAATTCCTTTAAAAAGCCAGGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547035.5
CDS CAA 90 bp TATCCCTCTTGCCATATTGGAACCACAGTACTCATGTCCCACCTTTaGCTATGGGGTGACAGCTTCTGTGGCACATTCCTCTTCTTGATA +
Preference number: 6 (lower is better)
Translates to: YPSCHIGTTVLMSHL*LWGDSFCGTFLFLI
Trigger: TATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGTGGGACATGAGTACTGTGGTTCCAATATGGCAAGAGGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 90 bp ACCATGCCCAGCCAGCTTACTGGTTTTATTCCTTCCAGATTTCAGTaGCTCAGGCCATTCTCCAAGGTGTCAGACTCCTTTCAGAATCAT +
Preference number: 6 (lower is better)
Translates to: TMPSQLTGFIPSRFQ*LRPFSKVSDSFQNH
Trigger: ATGATTCTGAAAGGAGTCTGACACCTTGGAGAATGGCCTGAGCAACTGAAATCTGGAAGGAATAAAACCAGTAAGCTGGCTGGGCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS TCA 72 bp AACCACAGTACTCATGTCCCACCTTTTGCTATGGGGTaGCAGCTTCTGTGGCACATTCCTCTTCTTGATAAG +
Preference number: 6 (lower is better)
Translates to: NHSTHVPPFAMG*QLLWHIPLLDK
Trigger: CTTATCAAGAAGAGGAATGTGCCACAGAAGCTGTCACCCCATAGCAAAAGGTGGGACATGAGTACTGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 72 bp TGCAAGAGGCTTCTGAAATTCCACCACGTGGATATTTaGTCTTTATGGTACTTTCTGGCCTGTGCAGCTGTC +
Preference number: 6 (lower is better)
Translates to: CKRLLKFHHVDI*SLWYFLACAAV
Trigger: GACAGCTGCACAGGCCAGAAAGTACCATAAAGAGCAAATATCCACGTGGTGGAATTTCAGAAGCCTCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 72 bp GCAAGCTACTGGTCAGGCATCGTAATAGATGCTCTGTaGAAGAGGCTTCTGAAATTCCACCACGTGGATATT +
Preference number: 6 (lower is better)
Translates to: ASYWSGIVIDAL*KRLLKFHHVDI
Trigger: AATATCCACGTGGTGGAATTTCAGAAGCCTCTTGCACAGAGCATCTATTACGATGCCTGACCAGTAGCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 72 bp TCAAACTTCCCTGGGTCTAGGTTCCAAATGAGGGTCTaGGGTCCTTTCCTTCTGTGTTCTAAGGTTGTTTAC +
Preference number: 6 (lower is better)
Translates to: SNFPGSRFQMRV*GPFLLCSKVVY
Trigger: GTAAACAACCTTAGAACACAGAAGGAAAGGACCCCAGACCCTCATTTGGAACCTAGACCCAGGGAAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp TGGGGTCCTTTCCTTCTGTGTTCTAAGGTTGTTTACTaGAGGCTCAACCAACCATGCTTGGTGGTTATGCTG +
Preference number: 6 (lower is better)
Translates to: WGPFLLCSKVVY*RLNQPCLVVML
Trigger: CAGCATAACCACCAAGCATGGTTGGTTGAGCCTCAAGTAAACAACCTTAGAACACAGAAGGAAAGGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp AGCAGGATCTGTCGGAATGATGGGCGATTTCGTGGTTaGCTATTCCTGAAAGGAATGGAGTTAGGAAGGAGA +
Preference number: 6 (lower is better)
Translates to: SRICRNDGRFRG*LFLKGMELGRR
Trigger: TCTCCTTCCTAACTCCATTCCTTTCAGGAATAGCAAACCACGAAATCGCCCATCATTCCGACAGATCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp CCTGCTAATATACCTGTTGCCACTTCAGTATCCCTCTaGCCATATTGGAACCACAGTACTCATGTCCCACCT +
Preference number: 6 (lower is better)
Translates to: PANIPVATSVSL*PYWNHSTHVPP
Trigger: AGGTGGGACATGAGTACTGTGGTTCCAATATGGCAAGAGGGATACTGAAGTGGCAACAGGTATATTAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 90 bp CTTCTGTGTTCTAAGGTTGTTTACTTGAGGCTCAACCAACCATGCTaGGTGGTTATGCTGCTCCTTCCTTGTACTTGTATGCACTCACTG +
Preference number: 6 (lower is better)
Translates to: LLCSKVVYLRLNQPC*VVMLLLPCTCMHSL
Trigger: CAGTGAGTGCATACAAGTACAAGGAAGGAGCAGCATAACCACCAAGCATGGTTGGTTGAGCCTCAAGTAAACAACCTTAGAACACAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 90 bp ACACATCTCCCTGCTAATATACCTGTTGCCACTTCAGTATCCCTCTaGCCATATTGGAACCACAGTACTCATGTCCCACCTTTTGCTATG +
Preference number: 6 (lower is better)
Translates to: THLPANIPVATSVSL*PYWNHSTHVPPFAM
Trigger: CATAGCAAAAGGTGGGACATGAGTACTGTGGTTCCAATATGGCAAGAGGGATACTGAAGTGGCAACAGGTATATTAGCAGGGAGATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 72 bp CTGCTAATATACCTGTTGCCACTTCAGTATCCCTCTTaGCATATTGGAACCACAGTACTCATGTCCCACCTT +
Preference number: 6 (lower is better)
Translates to: LLIYLLPLQYPS*HIGTTVLMSHL
Trigger: AAGGTGGGACATGAGTACTGTGGTTCCAATATGGCAAGAGGGATACTGAAGTGGCAACAGGTATATTAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 72 bp ATTTTTCAGCCGTCATCTGGTTGTTTGACGACTAGGTaGTTTAGGCATAGAAAGGGTGACATGCTCAGAGAC +
Preference number: 6 (lower is better)
Translates to: IFQPSSGCLTTR*FRHRKGDMLRD
Trigger: GTCTCTGAGCATGTCACCCTTTCTATGCCTAAACCACCTAGTCGTCAAACAACCAGATGACGGCTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547035.5
CDS CCA 72 bp ATACCTGTTGCCACTTCAGTATCCCTCTTGCCATATTaGAACCACAGTACTCATGTCCCACCTTTTGCTATG +
Preference number: 6 (lower is better)
Translates to: IPVATSVSLLPY*NHSTHVPPFAM
Trigger: CATAGCAAAAGGTGGGACATGAGTACTGTGGTTCCAATATGGCAAGAGGGATACTGAAGTGGCAACAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 72 bp TCTCCAAGGTGTCAGACTCCTTTCAGAATCATTCCCTaGCTGCAATTTATAGCTACATGCAAGCTACTGGTC +
Preference number: 6 (lower is better)
Translates to: SPRCQTPFRIIP*LQFIATCKLLV
Trigger: GACCAGTAGCTTGCATGTAGCTATAAATTGCAGCCAGGGAATGATTCTGAAAGGAGTCTGACACCTTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp AGCCAGCTTACTGGTTTTATTCCTTCCAGATTTCAGTaGCTCAGGCCATTCTCCAAGGTGTCAGACTCCTTT +
Preference number: 6 (lower is better)
Translates to: SQLTGFIPSRFQ*LRPFSKVSDSF
Trigger: AAAGGAGTCTGACACCTTGGAGAATGGCCTGAGCAACTGAAATCTGGAAGGAATAAAACCAGTAAGCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 90 bp CTAACCTTGGACACTAAAGTACACATCTCCCTGCTAATATACCTGTaGCCACTTCAGTATCCCTCTTGCCATATTGGAACCACAGTACTC +
Preference number: 6 (lower is better)
Translates to: LTLDTKVHISLLIYL*PLQYPSCHIGTTVL
Trigger: GAGTACTGTGGTTCCAATATGGCAAGAGGGATACTGAAGTGGCAACAGGTATATTAGCAGGGAGATGTGTACTTTAGTGTCCAAGGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp TCTAAGGTTGTTTACTTGAGGCTCAACCAACCATGCTaGGTGGTTATGCTGCTCCTTCCTTGTACTTGTATG +
Preference number: 6 (lower is better)
Translates to: SKVVYLRLNQPC*VVMLLLPCTCM
Trigger: CATACAAGTACAAGGAAGGAGCAGCATAACCACCAAGCATGGTTGGTTGAGCCTCAAGTAAACAACCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp TATACCTGTTGCCACTTCAGTATCCCTCTTGCCATATaGGAACCACAGTACTCATGTCCCACCTTTTGCTAT +
Preference number: 6 (lower is better)
Translates to: YTCCHFSIPLAI*EPQYSCPTFCY
Trigger: ATAGCAAAAGGTGGGACATGAGTACTGTGGTTCCAATATGGCAAGAGGGATACTGAAGTGGCAACAGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS GCA 72 bp TTCAGAATCATTCCCTGGCTGCAATTTATAGCTACATaGAAGCTACTGGTCAGGCATCGTAATAGATGCTCT +
Preference number: 6 (lower is better)
Translates to: FRIIPWLQFIAT*KLLVRHRNRCS
Trigger: AGAGCATCTATTACGATGCCTGACCAGTAGCTTGCATGTAGCTATAAATTGCAGCCAGGGAATGATTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CCA 72 bp TTATGCTGCTCCTTCCTTGTACTTGTATGCACTCACTaGCACTTCATGACAAATCAGGAATGCAGATATCGT +
Preference number: 6 (lower is better)
Translates to: LCCSFLVLVCTH*HFMTNQECRYR
Trigger: ACGATATCTGCATTCCTGATTTGTCATGAAGTGCCAGTGAGTGCATACAAGTACAAGGAAGGAGCAGCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 90 bp AAGGTTAAGACTGCCAAATCTATGTACTCAAAGCACTCCCTAACCTaGGACACTAAAGTACACATCTCCCTGCTAATATACCTGTTGCCA +
Preference number: 6 (lower is better)
Translates to: KVKTAKSMYSKHSLT*DTKVHISLLIYLLP
Trigger: TGGCAACAGGTATATTAGCAGGGAGATGTGTACTTTAGTGTCCAAGGTTAGGGAGTGCTTTGAGTACATAGATTTGGCAGTCTTAACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS CAA 72 bp CTTTTTAAAGGAATTTTTCAGCCGTCATCTGGTTGTTaGACGACTAGGTGGTTTAGGCATAGAAAGGGTGAC +
Preference number: 6 (lower is better)
Translates to: LFKGIFQPSSGC*TTRWFRHRKGD
Trigger: GTCACCCTTTCTATGCCTAAACCACCTAGTCGTCAAACAACCAGATGACGGCTGAAAAATTCCTTTAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547035.5
CDS CAA 72 bp ACTGCCAAATCTATGTACTCAAAGCACTCCCTAACCTaGGACACTAAAGTACACATCTCCCTGCTAATATAC +
Preference number: 6 (lower is better)
Translates to: TAKSMYSKHSLT*DTKVHISLLIY
Trigger: GTATATTAGCAGGGAGATGTGTACTTTAGTGTCCAAGGTTAGGGAGTGCTTTGAGTACATAGATTTGGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1
CDS TCA 72 bp TTTTTAAAGGAATTTTTCAGCCGTCATCTGGTTGTTTaGCGACTAGGTGGTTTAGGCATAGAAAGGGTGACA +
Preference number: 6 (lower is better)
Translates to: FLKEFFSRHLVV*RLGGLGIERVT
Trigger: TGTCACCCTTTCTATGCCTAAACCACCTAGTCGTCAAACAACCAGATGACGGCTGAAAAATTCCTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547035.5
CDS TCA 72 bp CCTTCCTTGTACTTGTATGCACTCACTGGCACTTCATaGCAAATCAGGAATGCAGATATCGTTAAGTGTATT +
Preference number: 6 (lower is better)
Translates to: PSLYLYALTGTS*QIRNADIVKCI
Trigger: AATACACTTAACGATATCTGCATTCCTGATTTGTCATGAAGTGCCAGTGAGTGCATACAAGTACAAGGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547020.1