RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP3K11 (Homo sapiens)

Ensembl gene IDs: ENSG00000173327

Ensembl transcript IDs: ENST00000309100.8, ENST00000524848.5, ENST00000524856.1, ENST00000526293.1, ENST00000526647.1, ENST00000527304.1, ENST00000529839.1, ENST00000530153.5, ENST00000530949.1, ENST00000532507.5, ENST00000533032.1, ENST00000534110.1

Found 581 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCCCAGCGAGGCGAGCAGGGCGGTGCCGCGCAGCAGCGCCCGCTaGATCAGCTTGGGCGTCCCAGAGCTGCTACCGCGCTCTGCGGGG +
Preference number: 1 (lower is better)
Translates to: RPSEASRAVPRSSAR*ISLGVPELLPRSAG
Trigger: CCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGGCGCTGCTGCGCGGCACCGCCCTGCTCGCCTCGCTGGGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR CCA 90 bp AGGCGAGCAGGGCGGTGCCGCGCAGCAGCGCCCGCTGGATCAGCTTaGGCGTCCCAGAGCTGCTACCGCGCTCTGCGGGGACAGGCCTCT +
Preference number: 1 (lower is better)
Translates to: RRAGRCRAAAPAGSA*ASQSCYRALRGQAS
Trigger: AGAGGCCTGTCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGGCGCTGCTGCGCGGCACCGCCCTGCTCGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR GCA 90 bp CGCCCGCTGGATCAGCTTGGGCGTCCCAGAGCTGCTACCGCGCTCTaGGGGGACAGGCCTCTTGGGCTCCTCGGGCTCCAGGCTAGGCCG +
Preference number: 1 (lower is better)
Translates to: RPLDQLGRPRAATAL*GDRPLGLLGLQARP
Trigger: CGGCCTAGCCTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR GCA 90 bp TGCCGCGCAGCAGCGCCCGCTGGATCAGCTTGGGCGTCCCAGAGCTaGTACCGCGCTCTGCGGGGACAGGCCTCTTGGGCTCCTCGGGCT +
Preference number: 1 (lower is better)
Translates to: CRAAAPAGSAWASQS*YRALRGQASWAPRA
Trigger: AGCCCGAGGAGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGGCGCTGCTGCGCGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR CCA 90 bp TTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTaGCTGGGGCAGCAGGAAGGCATCCAGAGAGCCCTGGCCCCAGAT +
Preference number: 1 (lower is better)
Translates to: FGFWLHWIPRLRLQP*LGQQEGIQRALAPD
Trigger: ATCTGGGGCCAGGGCTCTCTGGATGCCTTCCTGCTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR CCA 90 bp AAGGAGATCCTAAGGGGGATGAGTCATCTGAATCCAGGTACCATGTaGCTTCGTCCATGCGGGACCTTCTCCTCCCATTCTGGGCTTCCC +
Preference number: 1 (lower is better)
Translates to: KEILRGMSHLNPGTM*LRPCGTFSSHSGLP
Trigger: GGGAAGCCCAGAATGGGAGGAGAAGGTCCCGCATGGACGAAGCCACATGGTACCTGGATTCAGATGACTCATCCCCCTTAGGATCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR CAA 90 bp GAGGCGAGCAGGGCGGTGCCGCGCAGCAGCGCCCGCTGGATCAGCTaGGGCGTCCCAGAGCTGCTACCGCGCTCTGCGGGGACAGGCCTC +
Preference number: 2 (lower is better)
Translates to: EASRAVPRSSARWIS*GVPELLPRSAGTGL
Trigger: GAGGCCTGTCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGGCGCTGCTGCGCGGCACCGCCCTGCTCGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CCA 90 bp CAGGTCCAGCAACAGGGGTGCAGGAGTGGGCGGGGAGTCGGGCGTCTTGAGCGAGCCCCATGCCTGGCCTaGCTCTGCAGGCTCCAACTG +
Preference number: 2 (lower is better)
Translates to: QVQQQGCRSGRGVGRLERAPCLA*LCRLQL
Trigger: CAGTTGGAGCCTGCAGAGCCAGGCCAGGCATGGGGC...TCGCTCAAGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGTTGCTGGACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CCA 90 bp CTGCTACCGCGCTCTGCGGGGACAGGCCTCTTGGGCTCCTCGGGCTCCAGGCTAGTCCTCCCAACCAGCTaGGTACAGTGTTGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: LLPRSAGTGLLGSSGSRLVLPTS*VQCWAP
Trigger: TGGGGCCCAACACTGTACCCAGCTGGTTGGGAGGAC...TAGCCTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CCA 90 bp CCGCTGGATCAGCTTGGGCGTCCCAGAGCTGCTACCGCGCTCTGCGGGGACAGGCAGGCTCCAACTGGATaGCTCGGAACCGGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: PLDQLGRPRAATALCGDRQAPTG*LGTGER
Trigger: CCTTTCCCCGGTTCCGAGCCATCCAGTTGGAGCCTG...CCTGTCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CCA 90 bp CCCAGGTCCAGCAACAGGGGTGCAGGAGTGGGCGGGGAGTCGGGCGTCTTGAGCTCTGCAGGCTCCAACTaGATGGCTCGGAACCGGGGA +
Preference number: 2 (lower is better)
Translates to: PRSSNRGAGVGGESGVLSSAGSN*MARNRG
Trigger: TCCCCGGTTCCGAGCCATCCAGTTGGAGCCTGCAGA...GCTCAAGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGTTGCTGGACCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CCA 90 bp CTCCAGGGATCAATGCGGCTGCGAAGGGGCGAGGGCCGAGGTCGGCTGATGAGGTACAGGTTTCAGATGTaGGGGCGCAGGTCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: LQGSMRLRRGEGRGRLMRYRFQM*GRRSPF
Trigger: GAAGGGGGACCTGCGCCCCCACATCTGAAACCTGTA...CCTCATCAGCCGACCTCGGCCCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CCA 90 bp TGGCAGGTGGGGAGTCCCAGAAGGGGTCTGAGTCCGGGAACAAGGTCCAGGGTGGACTCCAACCCTGGCTaGGGCAGCAGGAAGGCATCC +
Preference number: 2 (lower is better)
Translates to: WQVGSPRRGLSPGTRSRVDSNPG*GSRKAS
Trigger: GGATGCCTTCCTGCTGCCCCAGCCAGGGTTGGAGTC...CACCCTGGACCTTGTTCCCGGACTCAGACCCCTTCTGGGACTCCCCACCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGAACCGGGGAAAGGTaGGCGAATCCCCAGGCCCGA +
Preference number: 2 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAGTGER*ANPQAR
Trigger: TCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR TCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAAGTGCTGGTGACAGCTaGGGCCGGCCCCTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: WLLASLDPEAKTPTLAGASAGDS*GRPLFP
Trigger: AGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACT...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR TCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGGTCAAAAGTGCTGGTaGCAGCTGAGGCCGGCCCCT +
Preference number: 2 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQGQKCW*QLRPAP
Trigger: AGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR GCA 90 bp AAGCTCCAGGGATCAATGCGGCTGCGAAGGGGCGAGGGCCGAGGTCGGCTGATGCTCGCCGCTCTCCATTaGTTGAGTCCTCCAGACGTC +
Preference number: 2 (lower is better)
Translates to: KLQGSMRLRRGEGRGRLMLAALH*LSPPDV
Trigger: GACGTCTGGAGGACTCAAGCAATGGAGAGCGGCGAG...CATCAGCCGACCTCGGCCCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CCA 90 bp GGAGAAGGCCGTGGCCCAGCTGACACAAAGCTCCAGGGATCAATGCGGCTGCGACAGGCTTGGGGGAACTaGGACCCCAAGCCCAGCATG +
Preference number: 2 (lower is better)
Translates to: GEGRGPADTKLQGSMRLRQAWGN*DPKPSM
Trigger: CATGCTGGGCTTGGGGTCCCAGTTCCCCCAAGCCTG...TCGCAGCCGCATTGATCCCTGGAGCTTTGTGTCAGCTGGGCCACGGCCTTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR TCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCCGCTCTCCATTGCTTaGGTCCTCCAGACGTCGGGG +
Preference number: 2 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLPLSIA*VLQTSG
Trigger: CCCCGACGTCTGGAGGACTCAAGCAATGGAGAGCGG...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR GCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGACCTCCCCTCCTCCCTaGATCACCCCAGCAGGCAAT +
Preference number: 2 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQTSPPP*ITPAGN
Trigger: ATTGCCTGCTGGGGTGATGCAGGGAGGAGGGGAGGT...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGTCCTCCCAACCAGCTaGGTACAGTGTTGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQVLPTS*VQCWAP
Trigger: TGGGGCCCAACACTGTACCCAGCTGGTTGGGAGGAC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCGCAGCAGCGCCCGCTaGATCAGCTTGGGCGTCCCA +
Preference number: 2 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGRSSAR*ISLGVP
Trigger: TGGGACGCCCAAGCTGATCCAGCGGGCGCTGCTGCG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR TCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCCAGCAGGCAATTCCCTaGGACAGGCTCTGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLQQAIP*DRLWSS
Trigger: GGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTG...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGACCTCCCCTCCTCCCTaGATCACCCCAGCAGGCAAT +
Preference number: 2 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLTSPPP*ITPAGN
Trigger: ATTGCCTGCTGGGGTGATGCAGGGAGGAGGGGAGGT...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCTACAGGTTTCAGATGTaGGGGCGCAGGTCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPYRFQM*GRRSPF
Trigger: GAAGGGGGACCTGCGCCCCCACATCTGAAACCTGTA...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCGTAGGGCAGGTGAGCTaGGGGGACCTACAGGTTTCA +
Preference number: 2 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPVGQVS*GDLQVS
Trigger: TGAAACCTGTAGGTCCCCCCAGCTCACCTGCCCTAC...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGAGCTGGGTACAGTGTTaGGCCCCAGTAGGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLSWVQC*APVGQV
Trigger: CACCTGCCCTACTGGGGCCCAACACTGTACCCAGCT...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCAGCTGGGTACAGTGTTaGGCCCCAGTAGGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLSWVQC*APVGQV
Trigger: CACCTGCCCTACTGGGGCCCAACACTGTACCCAGCT...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR TCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGTCCCCCTTCCAGTGTaGAGGCTTCCTGTGCAGTGT +
Preference number: 2 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAVPLPV*RLPVQC
Trigger: ACACTGCACAGGAAGCCTTCACACTGGAAGGGGGAC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR TCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGGTCAAAAGTGCTGGTaGCAGCTGAGGCCGGCCCCT +
Preference number: 2 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGGQKCW*QLRPAP
Trigger: AGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGTACAGGTTTCAGATGTaGGGGCGCAGGTCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLYRFQM*GRRSPF
Trigger: GAAGGGGGACCTGCGCCCCCACATCTGAAACCTGTA...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp GGAGAAGGCCGTGGCCCAGCTGACACAAAGCTCCAGGGATCAATGCGGCTGCGAAATCCAGGTACCATGTaGCTTCGTCCATGCGGGACC +
Preference number: 2 (lower is better)
Translates to: GEGRGPADTKLQGSMRLRNPGTM*LRPCGT
Trigger: GGTCCCGCATGGACGAAGCCACATGGTACCTGGATT...TCGCAGCCGCATTGATCCCTGGAGCTTTGTGTCAGCTGGGCCACGGCCTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR TCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGTTCCAGTGTATGCTGTaGCTCCTCCTAAGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQFQCML*LLLRQL
Trigger: CAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAA...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGAGCTGGGTACAGTGTTaGGCCCCAGTAGGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGSWVQC*APVGQV
Trigger: CACCTGCCCTACTGGGGCCCAACACTGTACCCAGCT...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCGGCTTCTGGCTTCACTaGATCCCGAGGCTAAGACTC +
Preference number: 2 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLGFWLH*IPRLRL
Trigger: GAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR TCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCTTCCAGTGTATGCTGTaGCTCCTCCTAAGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLFQCML*LLLRQL
Trigger: CAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAA...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR TCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCATTCCAGTGTATGCTGTaGCTCCTCCTAAGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAFQCML*LLLRQL
Trigger: CAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAA...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCTGTGAAGGCTTCCTGTaGAGTGTAGTGTTCCTGACC +
Preference number: 2 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPCEGFL*SVVFLT
Trigger: GGTCAGGAACACTACACTGCACAGGAAGCCTTCACA...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTGTGAAGGCTTCCTGTaGAGTGTAGTGTTCCTGACC +
Preference number: 2 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEACEGFL*SVVFLT
Trigger: GGTCAGGAACACTACACTGCACAGGAAGCCTTCACA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR GCA 90 bp GGGTTACCATTGAGTGCTGGGGGTGTGGAAGGAGATCCTAAGGGGGATGAGTCAACCCCAAGCCCAGCATaGTCGCCGCTCTCCATTGCT +
Preference number: 2 (lower is better)
Translates to: GLPLSAGGVEGDPKGDESTPSPA*SPLSIA
Trigger: AGCAATGGAGAGCGGCGAGCATGCTGGGCTTGGGGT...TGACTCATCCCCCTTAGGATCTCCTTCCACACCCCCAGCACTCAATGGTAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGTACAGGTTTCAGATGTaGGGGCGCAGGTCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGYRFQM*GRRSPF
Trigger: GAAGGGGGACCTGCGCCCCCACATCTGAAACCTGTA...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGTTACCATTGAGTGCTaGGGGTGTGGAAGGAGATCC +
Preference number: 2 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAVTIEC*GCGRRS
Trigger: GGATCTCCTTCCACACCCCCAGCACTCAATGGTAAC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR TCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGTCAAAAGTGCTGGTaGCAGCTGAGGCCGGCCCCT +
Preference number: 2 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAGQKCW*QLRPAP
Trigger: AGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACC...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR GCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCATGTGAAGGCTTCCTGTaGAGTGTAGTGTTCCTGACC +
Preference number: 2 (lower is better)
Translates to: WLLASLDPEAKTPTLAGACEGFL*SVVFLT
Trigger: GGTCAGGAACACTACACTGCACAGGAAGCCTTCACA...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCACGCAGTAGCAGGACTTaGTCAAAAGTGCTGGTGACA +
Preference number: 2 (lower is better)
Translates to: WLLASLDPEAKTPTLAGARSSRT*SKVLVT
Trigger: TGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCG...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp CGGGGGCTCTTGGCTGACCGCTGGCCCACAGGGATACCCAGGTCCAGCAACAGGGCTTTTGAGTTTATTTaGCTTCTGGCTTCACTGGAT +
Preference number: 2 (lower is better)
Translates to: RGLLADRWPTGIPRSSNRAFEFI*LLASLD
Trigger: ATCCAGTGAAGCCAGAAGCCAAATAAACTCAAAAGC...CCTGTTGCTGGACCTGGGTATCCCTGTGGGCCAGCGGTCAGCCAAGAGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR TCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGTTCCAGTGTATGCTGTaGCTCCTCCTAAGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGFQCML*LLLRQL
Trigger: CAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAA...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR TCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCAGCAGGCAATTCCCTaGGACAGGCTCTGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAQQAIP*DRLWSS
Trigger: GGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR GCA 90 bp GGGTTACCATTGAGTGCTGGGGGTGTGGAAGGAGATCCTAAGGGGGATGAGTCAATGTGGCTTCGTCCATaGGGGACCTTCTCCTCCCAT +
Preference number: 2 (lower is better)
Translates to: GLPLSAGGVEGDPKGDESMWLRP*GTFSSH
Trigger: ATGGGAGGAGAAGGTCCCGCATGGACGAAGCCACAT...TGACTCATCCCCCTTAGGATCTCCTTCCACACCCCCAGCACTCAATGGTAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTAGCTGGGTACAGTGTTaGGCCCCAGTAGGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: FIWLLASLDPEAKTPTLASWVQC*APVGQV
Trigger: CACCTGCCCTACTGGGGCCCAACACTGTACCCAGCT...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCAGTTTATTTGGCTTCTaGCTTCACTGGATCCCGAGG +
Preference number: 2 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLSLFGF*LHWIPR
Trigger: CCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAACT...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCGCAGTAGCAGGACTTaGTCAAAAGTGCTGGTGACA +
Preference number: 2 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGRSSRT*SKVLVT
Trigger: TGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR GCA 72 bp GACTCCCCGCGCTCGCGTCCTGGGCCTCCCGGCGGCTaGAGGTCGCGGCCAAGGCCCAGCGAGGCGAGCAGG +
Preference number: 3 (lower is better)
Translates to: DSPRSRPGPPGG*RSRPRPSEASR
Trigger: CCTGCTCGCCTCGCTGGGCCTTGGCCGCGACCTGCAGCCGCCGGGAGGCCCAGGACGCGAGCGCGGGGAGTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR GCA 72 bp GGTCGCGGCCAAGGCCCAGCGAGGCGAGCAGGGCGGTaGCGCGCAGCAGCGCCCGCTGGATCAGCTTGGGCG +
Preference number: 3 (lower is better)
Translates to: GRGQGPARRAGR*RAAAPAGSAWA
Trigger: CGCCCAAGCTGATCCAGCGGGCGCTGCTGCGCGGCACCGCCCTGCTCGCCTCGCTGGGCCTTGGCCGCGACC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR CCA 72 bp GGGCGGTGCCGCGCAGCAGCGCCCGCTGGATCAGCTTaGGCGTCCCAGAGCTGCTACCGCGCTCTGCGGGGA +
Preference number: 3 (lower is better)
Translates to: GRCRAAAPAGSA*ASQSCYRALRG
Trigger: TCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGGCGCTGCTGCGCGGCACCGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR GCA 72 bp GCAGCGCCCGCTGGATCAGCTTGGGCGTCCCAGAGCTaGTACCGCGCTCTGCGGGGACAGGCCTCTTGGGCT +
Preference number: 3 (lower is better)
Translates to: AAPAGSAWASQS*YRALRGQASWA
Trigger: AGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGGCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR GCA 72 bp GATCAGCTTGGGCGTCCCAGAGCTGCTACCGCGCTCTaGGGGGACAGGCCTCTTGGGCTCCTCGGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: DQLGRPRAATAL*GDRPLGLLGLQ
Trigger: CTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR GCA 72 bp CTGGCCCACAGGGATACCCAGGTCCAGCAACAGGGGTaGAGGAGTGGGCGGGGAGTCGGGCGTCTTGAGCGA +
Preference number: 3 (lower is better)
Translates to: LAHRDTQVQQQG*RSGRGVGRLER
Trigger: TCGCTCAAGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGTTGCTGGACCTGGGTATCCCTGTGGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR CCA 72 bp GGCTCCTCCTCACGTCGGGGGCTCTTGGCTGACCGCTaGCCCACAGGGATACCCAGGTCCAGCAACAGGGGT +
Preference number: 3 (lower is better)
Translates to: GSSSRRGLLADR*PTGIPRSSNRG
Trigger: ACCCCTGTTGCTGGACCTGGGTATCCCTGTGGGCCAGCGGTCAGCCAAGAGCCCCCGACGTGAGGAGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CAA 90 bp CCCAGGTCCAGCAACAGGGGTGCAGGAGTGGGCGGGGAGTCGGGCGTCTTGAGCGCTCGCCGCTCTCCATaGCTTGAGTCCTCCAGACGT +
Preference number: 3 (lower is better)
Translates to: PRSSNRGAGVGGESGVLSARRSP*LESSRR
Trigger: ACGTCTGGAGGACTCAAGCAATGGAGAGCGGCGAGC...GCTCAAGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGTTGCTGGACCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CAA 90 bp GCTGTGACTCCTCCTAAGGCAGCTGGAGCTCGGGGGAGTGGCCTGGCCCACTCAGGGGAGTCGGGCGTCTaGAGCGAGAAGCAGATGAGC +
Preference number: 3 (lower is better)
Translates to: AVTPPKAAGARGSGLAHSGESGV*SEKQMS
Trigger: GCTCATCTGCTTCTCGCTCAAGACGCCCGACTCCCC...TGAGTGGGCCAGGCCACTCCCCCGAGCTCCAGCTGCCTTAGGAGGAGTCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR-3UTR CAA 90 bp TGGCAGGTGGGGAGTCCCAGAAGGGGTCTGAGTCCGGGAACAAGGTCCAGGGTGGCCGCTCTCCATTGCTaGAGTCCTCCAGACGTCGGG +
Preference number: 3 (lower is better)
Translates to: WQVGSPRRGLSPGTRSRVAALHC*SPPDVG
Trigger: CCCGACGTCTGGAGGACTCAAGCAATGGAGAGCGGC...CACCCTGGACCTTGTTCCCGGACTCAGACCCCTTCTGGGACTCCCCACCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR CCA 72 bp TGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTaGCTGGGGCAGCAGGAAGGCATCCAGAGAGCCCTG +
Preference number: 3 (lower is better)
Translates to: WLHWIPRLRLQP*LGQQEGIQRAL
Trigger: CAGGGCTCTCTGGATGCCTTCCTGCTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
3UTR CCA 72 bp CTAAGGGGGATGAGTCATCTGAATCCAGGTACCATGTaGCTTCGTCCATGCGGGACCTTCTCCTCCCATTCT +
Preference number: 3 (lower is better)
Translates to: LRGMSHLNPGTM*LRPCGTFSSHS
Trigger: AGAATGGGAGGAGAAGGTCCCGCATGGACGAAGCCACATGGTACCTGGATTCAGATGACTCATCCCCCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524848.5
3UTR CAA 72 bp AGGGCGGTGCCGCGCAGCAGCGCCCGCTGGATCAGCTaGGGCGTCCCAGAGCTGCTACCGCGCTCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: RAVPRSSARWIS*GVPELLPRSAG
Trigger: CCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGGCGCTGCTGCGCGGCACCGCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp CTGCTACCGCGCTCTGCGGGGACAGGCCTCTTGGGCTCCTCGGGCTCCAGGCTATGGAGCTCGGGGGAGTaGCCTGGCCCACTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LLPRSAGTGLLGSSGSRLWSSGE*PGPLKA
Trigger: GGCCTTGAGTGGGCCAGGCCACTCCCCCGAGCTCCA...TAGCCTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR TCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCCAGCTGCTCCGCCTGTaGCCGCTGCTCGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAQLLRL*PLLARR
Trigger: GCGGCGCGCGAGCAGCGGTCACAGGCGGAGCAGCTG...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR TCA 90 bp CGGGGGCTCTTGGCTGACCGCTGGCCCACAGGGATACCCAGGTCCAGCAACAGGTCGGGGGCTCTTGGCTaGCCGCTGGCCCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: RGLLADRWPTGIPRSSNRSGALG*PLAHRD
Trigger: ATCCCTGTGGGCCAGCGGTCAGCCAAGAGCCCCCGA...CCTGTTGCTGGACCTGGGTATCCCTGTGGGCCAGCGGTCAGCCAAGAGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR TCA 90 bp TTGGGCGTCCCAGAGCTGCTACCGCGCTCTGCGGGGACAGGCCTCTTGGGCTCCAGTGCTGGTGACAGCTaGGGCCGGCCCCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LGVPELLPRSAGTGLLGSSAGDS*GRPLFP
Trigger: AGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACT...GGAGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp CAGGTCCAGCAACAGGGGTGCAGGAGTGGGCGGGGAGTCGGGCGTCTTGAGCGACGCAGCAGCGCCCGCTaGATCAGCTTGGGCGTCCCA +
Preference number: 4 (lower is better)
Translates to: QVQQQGCRSGRGVGRLERRSSAR*ISLGVP
Trigger: TGGGACGCCCAAGCTGATCCAGCGGGCGCTGCTGCG...TCGCTCAAGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGTTGCTGGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp TCCAACTGGATGGCTCGGAACCGGGGAAAGGTGGGCGAATCCCCAGGCCCGACCGCGCGGGCGTTGGCGTaGGGGGTGTTGTCGGGGACT +
Preference number: 4 (lower is better)
Translates to: SNWMARNRGKVGESPGPTARALA*GVLSGT
Trigger: AGTCCCCGACAACACCCCCCACGCCAACGCCCGCGC...GGTCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCCGAGCCATCCAGTTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp GATGGCTCGGAACCGGGGAAAGGTGGGCGAATCCCCAGGCCCGACCTCGAAGACCTCGGGGGAGTGGCCTaGCCCACTCAAGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: DGSEPGKGGRIPRPDLEDLGGVA*PTQGPA
Trigger: AGCGGGGCCTTGAGTGGGCCAGGCCACTCCCCCGAG...GTCTTCGAGGTCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCCGAGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR TCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCAGCTGCTCCGCCTGTaGCCGCTGCTCGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLQLLRL*PLLARR
Trigger: GCGGCGCGCGAGCAGCGGTCACAGGCGGAGCAGCTG...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR TCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCTGTCCCCGGTGGGGGTaGGACAGTGCCTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPCPRWG*DSASAG
Trigger: CCCCGCGGAGGCACTGTCTCACCCCCACCGGGGACA...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTGTCCCCGGTGGGGGTaGGACAGTGCCTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEACPRWG*DSASAG
Trigger: CCCCGCGGAGGCACTGTCTCACCCCCACCGGGGACA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCAGGCGAAGTCGGGCCTaGGGTGGGGGTCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPRRSRA*GGGPAP
Trigger: GGGCGCAGGACCCCCACCGCAGGCCCGACTTCGCCT...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCTCCGCCTGTGACCGCTaGTCGCGCGCCGCTCGCGTC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPSACDR*SRAARV
Trigger: GACGCGAGCGGCGCGCGAGCAGCGGTCACAGGCGGA...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGTCCGCCTGTGACCGCTaGTCGCGCGCCGCTCGCGTC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQSACDR*SRAARV
Trigger: GACGCGAGCGGCGCGCGAGCAGCGGTCACAGGCGGA...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTCCGCCTGTGACCGCTaGTCGCGCGCCGCTCGCGTC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEASACDR*SRAARV
Trigger: GACGCGAGCGGCGCGCGAGCAGCGGTCACAGGCGGA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTCGCGCCGCCGCAGCTaGTCCGCCTGTGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEASRRRS*SACDRC
Trigger: GCAGCGGTCACAGGCGGAGCAGCTGCGGCGGCGCGA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp GGAGAAGGCCGTGGCCCAGCTGACACAAAGCTCCAGGGATCAATGCGGCTGCGATCGCGCCGCCGCAGCTaGTCCGCCTGTGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: GEGRGPADTKLQGSMRLRSRRRS*SACDRC
Trigger: GCAGCGGTCACAGGCGGAGCAGCTGCGGCGGCGCGA...TCGCAGCCGCATTGATCCCTGGAGCTTTGTGTCAGCTGGGCCACGGCCTTCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR GCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCACTGGGCCAGCAGGTaGTCGCGCCGCCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQHWASR*SRRRSC
Trigger: GCAGCTGCGGCGGCGCGAGCACCTGCTGGCCCAGTG...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp ACCCAGGTCCAGCAACAGGGGTGCAGGAGTGGGCGGGGAGTCGGGCGTCTTGAGAGGCCGGGTGAGGCCTaGACGGTGATGCGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: TQVQQQGCRSGRGVGRLERPGEA*TVMRCL
Trigger: CAAGCACCGCATCACCGTGCAGGCCTCACCCGGCCT...CTCAAGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGTTGCTGGACCTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR GCA 90 bp CCGCTGGATCAGCTTGGGCGTCCCAGAGCTGCTACCGCGCTCTGCGGGGACAGGTGCCTGGCCTGGCTCTaGAGGCTCCAACTGGATGGC +
Preference number: 4 (lower is better)
Translates to: PLDQLGRPRAATALCGDRCLAWL*RLQLDG
Trigger: GCCATCCAGTTGGAGCCTGCAGAGCCAGGCCAGGCA...CCTGTCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR GCA 90 bp GATGGCTCGGAACCGGGGAAAGGTGGGCGAATCCCCAGGCCCGACCTCGAAGACTGGGCGTCCCAGAGCTaGTACCGCGCTCTGCGGGGA +
Preference number: 4 (lower is better)
Translates to: DGSEPGKGGRIPRPDLEDWASQS*YRALRG
Trigger: TCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCA...GTCTTCGAGGTCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCCGAGCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCGTCTGAGTCGGAGATaGCCTGGCGCCGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPRLSRR*PGAGRP
Trigger: GGGCCGGCCGGCGCCAGGGCATCTCCGACTCAGACG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS-3UTR CCA 90 bp TTGGGCGTCCCAGAGCTGCTACCGCGCTCTGCGGGGACAGGCCTCTTGGGCTCCCAGGCTTGGGGGAACTaGGACCCCAAGCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: LGVPELLPRSAGTGLLGSQAWGN*DPKPSM
Trigger: CATGCTGGGCTTGGGGTCCCAGTTCCCCCAAGCCTG...GGAGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp AAGCTCCAGGGATCAATGCGGCTGCGAAGGGGCGAGGGCCGAGGTCGGCTGATGACAGGGGTGCAGGAGTaGGCGGGGAGTCGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: KLQGSMRLRRGEGRGRLMTGVQE*AGSRAS
Trigger: AGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGT...CATCAGCCGACCTCGGCCCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp CCGCTGGATCAGCTTGGGCGTCCCAGAGCTGCTACCGCGCTCTGCGGGGACAGGGAAGGGGTTGGCAGGTaGGGAGTCCCAGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PLDQLGRPRAATALCGDREGVGR*GVPEGV
Trigger: GACCCCTTCTGGGACTCCCCACCTGCCAACCCCTTC...CCTGTCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR TCA 90 bp TGGCTCTGCAGGCTCCAACTGGATGGCTCGGAACCGGGGAAAGGTGGGCGAATCGGAGCTTGCTGCGCTTaGATGTCCCGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: WLCRLQLDGSEPGKGGRIGACCA*MSRGGG
Trigger: GCCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCC...GATTCGCCCACCTTTCCCCGGTTCCGAGCCATCCAGTTGGAGCCTGCAGAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR TCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCGGAGCTTGCTGCGCTTaGATGTCCCGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPGACCA*MSRGGG
Trigger: GCCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCC...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR TCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCCGGTCAAGGCCGGGTaGGGCCTGCACGGTGATGCG +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQPVKAG*GLHGDA
Trigger: CGCATCACCGTGCAGGCCTCACCCGGCCTTGACCGG...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCCGGTCAAGGCCGGGTaGGGCCTGCACGGTGATGCG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPPVKAG*GLHGDA
Trigger: CGCATCACCGTGCAGGCCTCACCCGGCCTTGACCGG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp CTGCTACCGCGCTCTGCGGGGACAGGCCTCTTGGGCTCCTCGGGCTCCAGGCTACAGCAGGCAATTCCCTaGGACAGGCTCTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLPRSAGTGLLGSSGSRLQQAIP*DRLWSS
Trigger: GGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTG...TAGCCTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR GCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAAGGCGAAGTCGGGCCTaGGGTGGGGGTCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGARRSRA*GGGPAP
Trigger: GGGCGCAGGACCCCCACCGCAGGCCCGACTTCGCCT...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCCCTAGTCCCGGAACCTaGGCATCCGGGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAPSPGT*ASGPWP
Trigger: GGGCCAGGGCCCGGATGCCCAGGTTCCGGGACTAGG...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCGGGGACAGGCCTCTTaGGCTCCTCGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPRGQAS*APRAPG
Trigger: GCCTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCGGGGACAGGCCTCTTaGGCTCCTCGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQRGQAS*APRAPG
Trigger: GCCTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCG...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGCGCGGGCGTTGGCGTaGGGGGTGTTGTCGGGGACT +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAARALA*GVLSGT
Trigger: AGTCCCCGACAACACCCCCCACGCCAACGCCCGCGC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp CGGGGGCTCTTGGCTGACCGCTGGCCCACAGGGATACCCAGGTCCAGCAACAGGCTCTTGGCTGACCGCTaGCCCACAGGGATACCCAGG +
Preference number: 4 (lower is better)
Translates to: RGLLADRWPTGIPRSSNRLLADR*PTGIPR
Trigger: CCTGGGTATCCCTGTGGGCCAGCGGTCAGCCAAGAG...CCTGTTGCTGGACCTGGGTATCCCTGTGGGCCAGCGGTCAGCCAAGAGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp CCAACTGGATGGCTCGGAACCGGGGAAAGGTGGGCGAATCCCCAGGCCCGACCTGGCACCCACGGGGCCTaGGCACCCATGTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: PTGWLGTGERWANPQARPGTHGA*APMSLV
Trigger: GACCAAAGACATGGGTGCCCAGGCCCCGTGGGTGCC...AGGTCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCCGAGCCATCCAGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCTCGGGGGAGTGGCCTaGCCCACTCAAGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPLGGVA*PTQGPA
Trigger: AGCGGGGCCTTGAGTGGGCCAGGCCACTCCCCCGAG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp CTGCTACCGCGCTCTGCGGGGACAGGCCTCTTGGGCTCCTCGGGCTCCAGGCTAAGCTGGGTACAGTGTTaGGCCCCAGTAGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLPRSAGTGLLGSSGSRLSWVQC*APVGQV
Trigger: CACCTGCCCTACTGGGGCCCAACACTGTACCCAGCT...TAGCCTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR TCA 90 bp TGGCAGGTGGGGAGTCCCAGAAGGGGTCTGAGTCCGGGAACAAGGTCCAGGGTGAGTCGAGTGGCATGCTaGTACGCTCGCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: WQVGSPRRGLSPGTRSRVSRVAC*YARRRR
Trigger: GCGACGGCGGCGAGCGTATCAGCATGCCACTCGACT...CACCCTGGACCTTGTTCCCGGACTCAGACCCCTTCTGGGACTCCCCACCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR TCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCACCGGTCAAGGCCGGGTaGGGCCTGCACGGTGATGCG +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAPVKAG*GLHGDA
Trigger: CGCATCACCGTGCAGGCCTCACCCGGCCTTGACCGG...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGTCGGGGGCTCTTGGCTaGCCGCTGGCCCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQSGALG*PLAHRD
Trigger: ATCCCTGTGGGCCAGCGGTCAGCCAAGAGCCCCCGA...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCTCGGGGGCTCTTGGCTaGCCGCTGGCCCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPSGALG*PLAHRD
Trigger: ATCCCTGTGGGCCAGCGGTCAGCCAAGAGCCCCCGA...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCCGCTCGCGGTCCACCTaGTGCAGCAGCAGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEARSRST*CSSSVS
Trigger: GCTGACGCTGCTGCTGCAGCAGGTGGACCGCGAGCG...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp CAGGTCCAGCAACAGGGGTGCAGGAGTGGGCGGGGAGTCGGGCGTCTTGAGCGAACCCCAAGCCCAGCATaGTCGCCGCTCTCCATTGCT +
Preference number: 4 (lower is better)
Translates to: QVQQQGCRSGRGVGRLERTPSPA*SPLSIA
Trigger: AGCAATGGAGAGCGGCGAGCATGCTGGGCTTGGGGT...TCGCTCAAGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGTTGCTGGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGCTGCTACCGCGCTCTaGGGGGACAGGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAAATAL*GDRPLG
Trigger: CCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAGC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGTGGGCGTCCCAGAGCTaGTACCGCGCTCTGCGGGGA +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQWASQS*YRALRG
Trigger: TCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCA...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TGGCAGGTGGGGAGTCCCAGAAGGGGTCTGAGTCCGGGAACAAGGTCCAGGGTGAGGGATCAATGCGGCTaGGAAGGGGCGAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: WQVGSPRRGLSPGTRSRVRDQCG*EGARAE
Trigger: CTCGGCCCTCGCCCCTTCGCAGCCGCATTGATCCCT...CACCCTGGACCTTGTTCCCGGACTCAGACCCCTTCTGGGACTCCCCACCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR GCA 90 bp CCAACTGGATGGCTCGGAACCGGGGAAAGGTGGGCGAATCCCCAGGCCCGACCTTCCGGCCATAAGCTGTaGGAAGGGCTCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PTGWLGTGERWANPQARPSGHKL*EGLGAG
Trigger: ACCTGCCCCGAGCCCTTCGCACAGCTTATGGCCGGA...AGGTCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCCGAGCCATCCAGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCGCAGTCCTGGGAGCCTaGCTCCGGCCCCCGCCAAGT +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLAVLGA*LRPPPS
Trigger: ACTTGGCGGGGGCCGGAGCCAGGCTCCCAGGACTGC...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCGCCGGGAGCCGGCGCTaGGATGTGTGGAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPAGSRR*DVWRTF
Trigger: GAAGGTCCTCCACACATCCCAGCGCCGGCTCCCGGC...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCGGGGACAGGCCTCTTaGGCTCCTCGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLRGQAS*APRAPG
Trigger: GCCTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCG...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCGCAGCAGCGCCCGCTaGATCAGCTTGGGCGTCCCA +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQRSSAR*ISLGVP
Trigger: TGGGACGCCCAAGCTGATCCAGCGGGCGCTGCTGCG...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGGCGCGGGCGTTGGCGTaGGGGGTGTTGTCGGGGACT +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLARALA*GVLSGT
Trigger: AGTCCCCGACAACACCCCCCACGCCAACGCCCGCGC...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCACAGGGGTGCAGGAGTaGGCGGGGAGTCGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEATGVQE*AGSRAS
Trigger: AGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGT...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCACGTCGGGGGCTCTTaGCTGACCGCTGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQHVGGS*LTAGPQ
Trigger: CTGTGGGCCAGCGGTCAGCCAAGAGCCCCCGACGTG...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCTCGGGGGAGTGGCCTaGCCCACTCAAGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLLGGVA*PTQGPA
Trigger: AGCGGGGCCTTGAGTGGGCCAGGCCACTCCCCCGAG...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTCGGCCAGAGCTCGGCTaGGGGGCCCACCGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGARPELG*GAHRLH
Trigger: ATGCAGCCGGTGGGCCCCTCAGCCGAGCTCTGGCCG...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR TCA 90 bp CCTAAGGGGGATGAGTCATCTGAATCCAGGTACCATGTGGCTTCGTCCATGCGGCAGCTGCTCCGCCTGTaGCCGCTGCTCGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PKGDESSESRYHVASSMRQLLRL*PLLARR
Trigger: GCGGCGCGCGAGCAGCGGTCACAGGCGGAGCAGCTG...CCGCATGGACGAAGCCACATGGTACCTGGATTCAGATGACTCATCCCCCTTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR TCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGTCGGGGGCTCTTGGCTaGCCGCTGGCCCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLSGALG*PLAHRD
Trigger: ATCCCTGTGGGCCAGCGGTCAGCCAAGAGCCCCCGA...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGTGTCCCCGGTGGGGGTaGGACAGTGCCTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGCPRWG*DSASAG
Trigger: CCCCGCGGAGGCACTGTCTCACCCCCACCGGGGACA...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCAGTGCTGGTGACAGCTaGGGCCGGCCCCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEASAGDS*GRPLFP
Trigger: AGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACT...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCCCCACCACCCCCGCTaGCACTGCCATTCCATGACC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPPHHPR*HCHSMT
Trigger: GGTCATGGAATGGCAGTGGCAGCGGGGGTGGTGGGG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGGGTCCTGGCGAGCTaGCTTCACAGCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAGVLAS*LHSHQL
Trigger: GAGCTGGTGGCTGTGAAGGCAGCTCGCCAGGACCCC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR GCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCACTGCGGTGGGGGTCCTaGGCCCAGCAGTCGGCCATA +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGALRWGS*AQQSAI
Trigger: TATGGCCGACTGCTGGGCGCAGGACCCCCACCGCAG...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCTGCGGTGGGGGTCCTaGGCCCAGCAGTCGGCCATA +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLLRWGS*AQQSAI
Trigger: TATGGCCGACTGCTGGGCGCAGGACCCCCACCGCAG...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR GCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTTCGCGCCGCCGCAGCTaGTCCGCCTGTGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGASRRRS*SACDRC
Trigger: GCAGCGGTCACAGGCGGAGCAGCTGCGGCGGCGCGA...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTCACTGGGCCAGCAGGTaGTCGCGCCGCCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAHWASR*SRRRSC
Trigger: GCAGCTGCGGCGGCGCGAGCACCTGCTGGCCCAGTG...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTCGCGGTCCACCTGCTaGAGCAGCAGCGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEASRSTC*SSSVSS
Trigger: CGAGCTGACGCTGCTGCTGCAGCAGGTGGACCGCGA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCAGGCCGGGTGAGGCCTaGACGGTGATGCGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPRPGEA*TVMRCL
Trigger: CAAGCACCGCATCACCGTGCAGGCCTCACCCGGCCT...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGGCTGCTACCGCGCTCTaGGGGGACAGGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLAATAL*GDRPLG
Trigger: CCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAGC...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCTGCTACCGCGCTCTaGGGGGACAGGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAAATAL*GDRPLG
Trigger: CCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAGC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGTGGTGAACGTGGGGTaGCTGGGGTGCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAVVNVG*LGCQEQ
Trigger: CTGCTCCTGGCACCCCAGGCACCCCACGTTCACCAC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCAGGGATCAATGCGGCTaGGAAGGGGCGAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPRDQCG*EGARAE
Trigger: CTCGGCCCTCGCCCCTTCGCAGCCGCATTGATCCCT...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCAGGGATCAATGCGGCTaGGAAGGGGCGAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEARDQCG*EGARAE
Trigger: CTCGGCCCTCGCCCCTTCGCAGCCGCATTGATCCCT...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCATTCTCTGGGTGCCCGTaGTCCCCACCCCCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAFSGCP*SPPPLA
Trigger: AGCCAGCGGGGGTGGGGACCACGGGCACCCAGAGAA...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCTCCAGCCGCAGCTCCTaGAAGCTGGCCACCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPSSRSS*KLATSQ
Trigger: CTGCGAGGTGGCCAGCTTCCAGGAGCTGCGGCTGGA...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTGGGGTGTGCCAGCATaGCGAAGAGCCGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAWGVPA*RRAGPP
Trigger: AGGAGGCCCGGCTCTTCGCCATGCTGGCACACCCCA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCACAGTTGACCAGCACATaGGGAGGCACGCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAQLTST*GGTRRP
Trigger: CGGGCGGCGCGTGCCTCCCCATGTGCTGGTCAACTG...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp AAGCTCCAGGGATCAATGCGGCTGCGAAGGGGCGAGGGCCGAGGTCGGCTGATGCAGGCTCCAACTGGATaGCTCGGAACCGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: KLQGSMRLRRGEGRGRLMQAPTG*LGTGER
Trigger: CCTTTCCCCGGTTCCGAGCCATCCAGTTGGAGCCTG...CATCAGCCGACCTCGGCCCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGCCCCATGCCTGGCCTaGCTCTGCAGGCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQAPCLA*LCRLQL
Trigger: CAGTTGGAGCCTGCAGAGCCAGGCCAGGCATGGGGC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCGCCCCATGCCTGGCCTaGCTCTGCAGGCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPAPCLA*LCRLQL
Trigger: CAGTTGGAGCCTGCAGAGCCAGGCCAGGCATGGGGC...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCACAGGGGTGCAGGAGTaGGCGGGGAGTCGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLTGVQE*AGSRAS
Trigger: AGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGT...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCGGCACCCACGGGGCCTaGGCACCCATGTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPGTHGA*APMSLV
Trigger: GACCAAAGACATGGGTGCCCAGGCCCCGTGGGTGCC...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCACCCACGGGGCCTaGGCACCCATGTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAGTHGA*APMSLV
Trigger: GACCAAAGACATGGGTGCCCAGGCCCCGTGGGTGCC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGGCACCCACGGGGCCTaGGCACCCATGTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQGTHGA*APMSLV
Trigger: GACCAAAGACATGGGTGCCCAGGCCCCGTGGGTGCC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCATGGAGCTCGGGGGAGTaGCCTGGCCCACTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAWSSGE*PGPLKA
Trigger: GGCCTTGAGTGGGCCAGGCCACTCCCCCGAGCTCCA...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGGAGCTTGCTGCGCTTaGATGTCCCGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGGACCA*MSRGGG
Trigger: GCCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR TCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGAGTCGAGTGGCATGCTaGTACGCTCGCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLSRVAC*YARRRR
Trigger: GCGACGGCGGCGAGCGTATCAGCATGCCACTCGACT...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR TCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCAGTCGAGTGGCATGCTaGTACGCTCGCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLSRVAC*YARRRR
Trigger: GCGACGGCGGCGAGCGTATCAGCATGCCACTCGACT...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR TCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCCCGCTCTCCATTGCTTaGGTCCTCCAGACGTCGGGG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAPLSIA*VLQTSG
Trigger: CCCCGACGTCTGGAGGACTCAAGCAATGGAGAGCGG...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCCGCTCTCCATTGCTTaGGTCCTCCAGACGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPPLSIA*VLQTSG
Trigger: CCCCGACGTCTGGAGGACTCAAGCAATGGAGAGCGG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCAGGCCGTGGCCCAGCTaGCACAAAGCTCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPRPWPS*HKAPGI
Trigger: GATCCCTGGAGCTTTGTGTCAGCTGGGCCACGGCCT...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGTCAAAAGTGCTGGTaGCAGCTGAGGCCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAGQKCW*QLRPAP
Trigger: AGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp GGAGAAGGCCGTGGCCCAGCTGACACAAAGCTCCAGGGATCAATGCGGCTGCGAGGTCAAAAGTGCTGGTaGCAGCTGAGGCCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GEGRGPADTKLQGSMRLRGQKCW*QLRPAP
Trigger: AGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACC...TCGCAGCCGCATTGATCCCTGGAGCTTTGTGTCAGCTGGGCCACGGCCTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR TCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGCGGCACGATGGCTGTaGGACTGTGACCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQAARWL*DCDQPH
Trigger: GTGAGGCTGGTCACAGTCTCACAGCCATCGTGCCGC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS-3UTR GCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCCCACCCCCGCTGGCTaGCAAGGCCCTAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGPTPAG*QGPSPG
Trigger: TCCGGGACTAGGGCCTTGGCAGCCAGCGGGGGTGGG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGTCGCGGTCCACCTGCTaGAGCAGCAGCGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLSRSTC*SSSVSS
Trigger: CGAGCTGACGCTGCTGCTGCAGCAGGTGGACCGCGA...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTGCCTGGCCTGGCTCTaGAGGCTCCAACTGGATGGC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEACLAWL*RLQLDG
Trigger: GCCATCCAGTTGGAGCCTGCAGAGCCAGGCCAGGCA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GCTGTGACTCCTCCTAAGGCAGCTGGAGCTCGGGGGAGTGGCCTGGCCCACTCACTCGCCGCTCTCCATTaGTTGAGTCCTCCAGACGTC +
Preference number: 4 (lower is better)
Translates to: AVTPPKAAGARGSGLAHSLAALH*LSPPDV
Trigger: GACGTCTGGAGGACTCAAGCAATGGAGAGCGGCGAG...TGAGTGGGCCAGGCCACTCCCCCGAGCTCCAGCTGCCTTAGGAGGAGTCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR GCA 90 bp AGGTACCATGTGGCTTCGTCCATGCGGGACCTTCTCCTCCCATTCTGGGCTTCCGCTGCTACCGCGCTCTaGGGGGACAGGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RYHVASSMRDLLLPFWASAATAL*GDRPLG
Trigger: CCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAGC...GGAAGCCCAGAATGGGAGGAGAAGGTCCCGCATGGACGAAGCCACATGGTACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGGTGGTGAACGTGGGGTaGCTGGGGTGCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLVVNVG*LGCQEQ
Trigger: CTGCTCCTGGCACCCCAGGCACCCCACGTTCACCAC...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGAGGGATCAATGCGGCTaGGAAGGGGCGAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLRDQCG*EGARAE
Trigger: CTCGGCCCTCGCCCCTTCGCAGCCGCATTGATCCCT...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCAGCTCCAGGGATCAATaGGGCTGCGAAGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEASSRDQ*GCEGAR
Trigger: CCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAGCT...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCAGCTCCAGGGATCAATaGGGCTGCGAAGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPSSRDQ*GCEGAR
Trigger: CCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAGCT...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCCCCCGCTCCTGGCTCTaGCAGCTGCTAAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLPRSWL*QLLSPI
Trigger: GATGGGGCTTAGCAGCTGGCAGAGCCAGGAGCGGGG...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGGAGCGTCCGCAGTTaGGCCGAGACTGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAGSVRS*AETACS
Trigger: GGAACAGGCAGTCTCGGCCCAACTGCGGACGCTCCC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCCCGCCAAGTGTAAGGTaGGGCCTTCAGGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLPPSVR*GLQGQR
Trigger: GCGCTGCCCCTGAAGGCCCCACCTTACACTTGGCGG...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGTCCGGCGCCTCACCATaGCTAGCTTGGAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLSGASP*LAWRDP
Trigger: CGGGTCCCTCCAAGCTAGCCATGGTGAGGCGCCGGA...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTCCTCATCGGGGTCCTaGCGAGCTGCCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEASSSGS*RAAFTA
Trigger: GGCTGTGAAGGCAGCTCGCCAGGACCCCGATGAGGA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCCCAACTGCTGCAGGATaGAGGCGAAGTCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAPTAAG*RRSRAC
Trigger: GCAGGCCCGACTTCGCCTCCATCCTGCAGCAGTTGG...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCCAACTGCTGCAGGATaGAGGCGAAGTCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPPTAAG*RRSRAC
Trigger: GCAGGCCCGACTTCGCCTCCATCCTGCAGCAGTTGG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR CCA 90 bp CCAACTGGATGGCTCGGAACCGGGGAAAGGTGGGCGAATCCCCAGGCCCGACCTTCGTCGAAGAGACCCTaGATCTCGCGCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PTGWLGTGERWANPQARPSSKRP*ISRFQP
Trigger: AGGCTGGAAGCGCGAGATCCAGGGTCTCTTCGACGA...AGGTCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCCGAGCCATCCAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGAACCGGGGAAAGGTaGGCGAATCCCCAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAGTGER*ANPQAR
Trigger: TCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGGCCCCATGCCTGGCCTaGCTCTGCAGGCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLAPCLA*LCRLQL
Trigger: CAGTTGGAGCCTGCAGAGCCAGGCCAGGCATGGGGC...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCGGGGACAGGCCTCTTaGGCTCCTCGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGRGQAS*APRAPG
Trigger: GCCTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCCCGCTGGATCAGCTTaGGCGTCCCAGAGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQPAGSA*ASQSCY
Trigger: GTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGG...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCGCGGGCGTTGGCGTaGGGGGTGTTGTCGGGGACT +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGARALA*GVLSGT
Trigger: AGTCCCCGACAACACCCCCCACGCCAACGCCCGCGC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCCTCTTGGCTGACCGCTaGCCCACAGGGATACCCAGG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEALLADR*PTGIPR
Trigger: CCTGGGTATCCCTGTGGGCCAGCGGTCAGCCAAGAG...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGAAGGGGTTGGCAGGTaGGGAGTCCCAGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQEGVGR*GVPEGV
Trigger: GACCCCTTCTGGGACTCCCCACCTGCCAACCCCTTC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGAAGGGGTTGGCAGGTaGGGAGTCCCAGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAEGVGR*GVPEGV
Trigger: GACCCCTTCTGGGACTCCCCACCTGCCAACCCCTTC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GATGGCTCGGAACCGGGGAAAGGTGGGCGAATCCCCAGGCCCGACCTCGAAGACGGGCACCCATGTCTTTaGTCTGTGCCCTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: DGSEPGKGGRIPRPDLEDGHPCL*SVPCSP
Trigger: AGGACTGCAGGGCACAGACCAAAGACATGGGTGCCC...GTCTTCGAGGTCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCCGAGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp AAGCTCCAGGGATCAATGCGGCTGCGAAGGGGCGAGGGCCGAGGTCGGCTGATGTACAGGTTTCAGATGTaGGGGCGCAGGTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KLQGSMRLRRGEGRGRLMYRFQM*GRRSPF
Trigger: GAAGGGGGACCTGCGCCCCCACATCTGAAACCTGTA...CATCAGCCGACCTCGGCCCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAAGGCCCAGGCCGGGCTaGCTGGTCAGTCCTGTGACT +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGARPRPG*LVSPVT
Trigger: AGTCACAGGACTGACCAGCCAGCCCGGCCTGGGCCT...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGGCTTGGGAGTGGCCTaGGCAGCTCACACCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQGLGVA*AAHTSS
Trigger: GGAAGAGGTGTGAGCTGCCCAGGCCACTCCCAAGCC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCCCTCTGATAGGGACCTaGCCACCAGCTCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAPLIGT*PPAPSL
Trigger: CAGGGAGGGAGCTGGTGGCCAGGTCCCTATCAGAGG...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR TCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCCAGCCCTCGTCTCCTaGGATGGCTGCGTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGPALVS*DGCVPG
Trigger: TCCCGGGACGCAGCCATCTCAGGAGACGAGGGCTGG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR TCA 90 bp CCTAAGGGGGATGAGTCATCTGAATCCAGGTACCATGTGGCTTCGTCCATGCGGCCGGTCAAGGCCGGGTaGGGCCTGCACGGTGATGCG +
Preference number: 4 (lower is better)
Translates to: PKGDESSESRYHVASSMRPVKAG*GLHGDA
Trigger: CGCATCACCGTGCAGGCCTCACCCGGCCTTGACCGG...CCGCATGGACGAAGCCACATGGTACCTGGATTCAGATGACTCATCCCCCTTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR TCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCACCGCTCTCCATTGCTTaGGTCCTCCAGACGTCGGGG +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAPLSIA*VLQTSG
Trigger: CCCCGACGTCTGGAGGACTCAAGCAATGGAGAGCGG...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGAGGCCGTGGCCCAGCTaGCACAAAGCTCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLRPWPS*HKAPGI
Trigger: GATCCCTGGAGCTTTGTGTCAGCTGGGCCACGGCCT...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCGTCCCAGAAGGGGTCTaGGTCCGGGAACAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPVPEGV*VREQGP
Trigger: TGGACCTTGTTCCCGGACTCAGACCCCTTCTGGGAC...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCAGCAGGCAATTCCCTaGGACAGGCTCTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQQQAIP*DRLWSS
Trigger: GGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTG...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCGGCTGGTCAGTCCTGTaGCTCGTGGGCCTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPGWSVL*LVGLEN
Trigger: ATTCTCCAGGCCCACGAGTCACAGGACTGACCAGCC...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCACCCCCGCTGCCACTaGCATTCCATGACCCTAGAG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPHPRCH*HSMTLE
Trigger: CTCTAGGGTCATGGAATGGCAGTGGCAGCGGGGGTG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGGAGGGGCCCACCGGCTaGATACTCCATCACCAGGCA +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLEGPTG*ILHHQA
Trigger: TGCCTGGTGATGGAGTATGCAGCCGGTGGGCCCCTC...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR GCA 90 bp CAGGTCCAGCAACAGGGGTGCAGGAGTGGGCGGGGAGTCGGGCGTCTTGAGCGAATTTGTGTGGTTTTGTaGCACTCTCGGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QVQQQGCRSGRGVGRLERICVVL*HSRARP
Trigger: TGGCCTGGCCCGAGAGTGGCACAAAACCACACAAAT...TCGCTCAAGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGTTGCTGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR GCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCGCTCGCGGTCCACCTaGTGCAGCAGCAGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGRSRST*CSSSVS
Trigger: GCTGACGCTGCTGCTGCAGCAGGTGGACCGCGAGCG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTCGCTCGCGGTCCACCTaGTGCAGCAGCAGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGARSRST*CSSSVS
Trigger: GCTGACGCTGCTGCTGCAGCAGGTGGACCGCGAGCG...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGTGCCTGGCCTGGCTCTaGAGGCTCCAACTGGATGGC +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLCLAWL*RLQLDG
Trigger: GCCATCCAGTTGGAGCCTGCAGAGCCAGGCCAGGCA...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCACCCCAAGCCCAGCATaGTCGCCGCTCTCCATTGCT +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEATPSPA*SPLSIA
Trigger: AGCAATGGAGAGCGGCGAGCATGCTGGGCTTGGGGT...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAAGCTCCAGGGATCAATaGGGCTGCGAAGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGASSRDQ*GCEGAR
Trigger: CCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAGCT...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCCATGTCTTTGGTCTGTaGCCTGCAGTCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAHVFGL*PAVLGA
Trigger: GGCCCCCAGGACTGCAGGGCACAGACCAAAGACATG...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGGGGAAGCTCTCAGTaGCCCTTTAGGGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAGGSSQ*PFRAPW
Trigger: CCAGGGAGCCCTAAAGGGGCACTGAGAGCTTCCCCC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGGAGACTGCCTGTTCCTaGCCCCGTCTCCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLETACS*PRLLWP
Trigger: GGGCCAAAGGAGACGGGGCCAGGAACAGGCAGTCTC...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCCGCCTCAACTCCGGTTaGGTCTTTTTGCGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEARLNSG*VFLRRG
Trigger: CCCCCTGCGCAAAAAGACCCAACCGGAGTTGAGGCG...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTGTTCTGGAGCAGTCCTaGGAGCCTGGCTCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAVLEQS*EPGSGP
Trigger: GGGGCCGGAGCCAGGCTCCCAGGACTGCTCCAGAAC...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCGGCGCTGGGATGTGTaGAGGACCTTCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLRRWDV*RTFSGC
Trigger: GCACCCAGAGAAGGTCCTCCACACATCCCAGCGCCG...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTTCTTCAAGGGCTCCATaGCCGGGAGCCGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGASSRAP*PGAGAG
Trigger: CCCAGCGCCGGCTCCCGGCCATGGAGCCCTTGAAGA...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGCTCATCCTGCCCACTaGGCTCGTAGTCGAACAGGG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAAHPAH*ARSRTG
Trigger: CCCTGTTCGACTACGAGCCCAGTGGGCAGGATGAGC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp CAGGTCCAGCAACAGGGGTGCAGGAGTGGGCGGGGAGTCGGGCGTCTTGAGCGACGGCACTCATTTGTGTaGTTTTGTGCCACTCTCGGG +
Preference number: 4 (lower is better)
Translates to: QVQQQGCRSGRGVGRLERRHSFV*FCATLG
Trigger: CCCGAGAGTGGCACAAAACCACACAAATGAGTGCCG...TCGCTCAAGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGTTGCTGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCAGGCTCCAACTGGATaGCTCGGAACCGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPQAPTG*LGTGER
Trigger: CCTTTCCCCGGTTCCGAGCCATCCAGTTGGAGCCTG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCAGGCTCCAACTGGATaGCTCGGAACCGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQQAPTG*LGTGER
Trigger: CCTTTCCCCGGTTCCGAGCCATCCAGTTGGAGCCTG...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTCTGCAGGCTCCAACTaGATGGCTCGGAACCGGGGA +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEASAGSN*MARNRG
Trigger: TCCCCGGTTCCGAGCCATCCAGTTGGAGCCTGCAGA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCCAGGCTTGGGGGAACTaGGACCCCAAGCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLQAWGN*DPKPSM
Trigger: CATGCTGGGCTTGGGGTCCCAGTTCCCCCAAGCCTG...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTACAGGGGTGCAGGAGTaGGCGGGGAGTCGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGATGVQE*AGSRAS
Trigger: AGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGT...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTCACGTCGGGGGCTCTTaGCTGACCGCTGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAHVGGS*LTAGPQ
Trigger: CTGTGGGCCAGCGGTCAGCCAAGAGCCCCCGACGTG...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCACGTCGGGGGCTCTTaGCTGACCGCTGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGHVGGS*LTAGPQ
Trigger: CTGTGGGCCAGCGGTCAGCCAAGAGCCCCCGACGTG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTTGGAGCTCGGGGGAGTaGCCTGGCCCACTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAWSSGE*PGPLKA
Trigger: GGCCTTGAGTGGGCCAGGCCACTCCCCCGAGCTCCA...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGTGGAGCTCGGGGGAGTaGCCTGGCCCACTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGWSSGE*PGPLKA
Trigger: GGCCTTGAGTGGGCCAGGCCACTCCCCCGAGCTCCA...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGACTCCAACCCTGGCTaGGGCAGCAGGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGADSNPG*GSRKAS
Trigger: GGATGCCTTCCTGCTGCCCCAGCCAGGGTTGGAGTC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCGACTCCAACCCTGGCTaGGGCAGCAGGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLDSNPG*GSRKAS
Trigger: GGATGCCTTCCTGCTGCCCCAGCCAGGGTTGGAGTC...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCTAAGACTCCAACCCTaGCTGGGGCAGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPLRLQP*LGQQEG
Trigger: GCCTTCCTGCTGCCCCAGCCAGGGTTGGAGTCTTAG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp CCAACTGGATGGCTCGGAACCGGGGAAAGGTGGGCGAATCCCCAGGCCCGACCTGGCTTCTGGCTTCACTaGATCCCGAGGCTAAGACTC +
Preference number: 4 (lower is better)
Translates to: PTGWLGTGERWANPQARPGFWLH*IPRLRL
Trigger: GAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC...AGGTCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCCGAGCCATCCAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGCCAGGTCTCCCACTTaGGAGGGGGAGTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAARSPT*EGESFW
Trigger: CCAAAAGGACTCCCCCTCCCAAGTGGGAGACCTGGC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCAGAGACCCCGAAACTaGGGGAAGCTCTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPQRPRN*GKLSVP
Trigger: GGGCACTGAGAGCTTCCCCCAGTTTCGGGGTCTCTG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR TCA 90 bp AGGTACCATGTGGCTTCGTCCATGCGGGACCTTCTCCTCCCATTCTGGGCTTCCAGGCCGTGGCCCAGCTaGCACAAAGCTCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: RYHVASSMRDLLLPFWASRPWPS*HKAPGI
Trigger: GATCCCTGGAGCTTTGTGTCAGCTGGGCCACGGCCT...GGAAGCCCAGAATGGGAGGAGAAGGTCCCGCATGGACGAAGCCACATGGTACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR TCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCGTCCCAGAAGGGGTCTaGGTCCGGGAACAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLVPEGV*VREQGP
Trigger: TGGACCTTGTTCCCGGACTCAGACCCCTTCTGGGAC...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCGTCCCCCTTCCAGTGTaGAGGCTTCCTGTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPVPLPV*RLPVQC
Trigger: ACACTGCACAGGAAGCCTTCACACTGGAAGGGGGAC...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGTCCCCCTTCCAGTGTaGAGGCTTCCTGTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAVPLPV*RLPVQC
Trigger: ACACTGCACAGGAAGCCTTCACACTGGAAGGGGGAC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCACAGCAGGCAATTCCCTaGGACAGGCTCTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAQQAIP*DRLWSS
Trigger: GGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTG...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGAGTGCTGGTGACAGCTaGGGCCGGCCCCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGSAGDS*GRPLFP
Trigger: AGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACT...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGAAAGCTACTCGTCTaGGTCGGAGATGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAGKLLV*VGDALA
Trigger: CGCCAGGGCATCTCCGACTCAGACGAGTAGCTTTCC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS-3UTR GCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCACTGGGCCAGCAGGTaGTCGCGCCGCCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAHWASR*SRRRSC
Trigger: GCAGCTGCGGCGGCGCGAGCACCTGCTGGCCCAGTG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTTCGCGGTCCACCTGCTaGAGCAGCAGCGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGASRSTC*SSSVSS
Trigger: CGAGCTGACGCTGCTGCTGCAGCAGGTGGACCGCGA...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTAGGCCGGGTGAGGCCTaGACGGTGATGCGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGARPGEA*TVMRCL
Trigger: CAAGCACCGCATCACCGTGCAGGCCTCACCCGGCCT...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGAGGCCGGGTGAGGCCTaGACGGTGATGCGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGRPGEA*TVMRCL
Trigger: CAAGCACCGCATCACCGTGCAGGCCTCACCCGGCCT...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCCTCGCCGCTCTCCATTaGTTGAGTCCTCCAGACGTC +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEALAALH*LSPPDV
Trigger: GACGTCTGGAGGACTCAAGCAATGGAGAGCGGCGAG...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCACCCCAAGCCCAGCATaGTCGCCGCTCTCCATTGCT +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLTPSPA*SPLSIA
Trigger: AGCAATGGAGAGCGGCGAGCATGCTGGGCTTGGGGT...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTGTGGTGAACGTGGGGTaGCTGGGGTGCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAVVNVG*LGCQEQ
Trigger: CTGCTCCTGGCACCCCAGGCACCCCACGTTCACCAC...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCCATGTCTTTGGTCTGTaGCCTGCAGTCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLHVFGL*PAVLGA
Trigger: GGCCCCCAGGACTGCAGGGCACAGACCAAAGACATG...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAACCTCCCCTCCTCCCTaGATCACCCCAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGATSPPP*ITPAGN
Trigger: ATTGCCTGCTGGGGTGATGCAGGGAGGAGGGGAGGT...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCAGCTTCCCTCGGTTCTaGAGCAGTCCTGGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLSFPRF*SSPGSL
Trigger: CAGGCTCCCAGGACTGCTCCAGAACCGAGGGAAGCT...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTAAGAGCCGGGCCTCCTaGCGAACGCTCTCGGCTGTC +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAKSRAS*RTLSAV
Trigger: GACAGCCGAGAGCGTTCGCCAGGAGGCCCGGCTCTT...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGGTCAATGCCACGGTATaGCACCTCCCCGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLVNATV*HLPGQQ
Trigger: CTGCTGACCGGGGAGGTGCCATACCGTGGCATTGAC...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCTCCAGCCTTCCTGCATaGAATGGAAGGAGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPSSLPA*NGRSPA
Trigger: CGCGGGACTCCTTCCATTCCATGCAGGAAGGCTGGA...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTGGAACCGGGGAAAGGTaGGCGAATCCCCAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAGTGER*ANPQAR
Trigger: TCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCC...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCTCTGCAGGCTCCAACTaGATGGCTCGGAACCGGGGA +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLSAGSN*MARNRG
Trigger: TCCCCGGTTCCGAGCCATCCAGTTGGAGCCTGCAGA...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCCCCATGCCTGGCCTaGCTCTGCAGGCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGAPCLA*LCRLQL
Trigger: CAGTTGGAGCCTGCAGAGCCAGGCCAGGCATGGGGC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGTACAGGTTTCAGATGTaGGGGCGCAGGTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQYRFQM*GRRSPF
Trigger: GAAGGGGGACCTGCGCCCCCACATCTGAAACCTGTA...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAAGCTGGGTACAGTGTTaGGCCCCAGTAGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGASWVQC*APVGQV
Trigger: CACCTGCCCTACTGGGGCCCAACACTGTACCCAGCT...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCGTCCTCCCAACCAGCTaGGTACAGTGTTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLVLPTS*VQCWAP
Trigger: TGGGGCCCAACACTGTACCCAGCTGGTTGGGAGGAC...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GTACCATGTGGCTTCGTCCATGCGGGACCTTCTCCTCCCATTCTGGGCTTCCCCCTAAGACTCCAACCCTaGCTGGGGCAGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VPCGFVHAGPSPPILGFPLRLQP*LGQQEG
Trigger: GCCTTCCTGCTGCCCCAGCCAGGGTTGGAGTCTTAG...GGGGAAGCCCAGAATGGGAGGAGAAGGTCCCGCATGGACGAAGCCACATGGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCACTAAGACTCCAACCCTaGCTGGGGCAGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGALRLQP*LGQQEG
Trigger: GCCTTCCTGCTGCCCCAGCCAGGGTTGGAGTCTTAG...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCCTACTTCTCCTTTCTaGGAGGCCTGGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPPTSPF*EAWARS
Trigger: AGACCTGGCCCAGGCCTCCCAGAAAGGAGAAGTAGG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCTGTAGATCCCAGGCATaGGAGGTCAGGGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPCRSQA*EVRGHP
Trigger: TGGGTGACCCCTGACCTCCCATGCCTGGGATCTACA...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR TCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCCCAGGCCAAAGTCGGTaGTCTTCAGGGTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAPGQSR*SSGSCA
Trigger: AGCACAAGACCCTGAAGATCACCGACTTTGGCCTGG...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR TCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCCGCTCTCCATTGCTTaGGTCCTCCAGACGTCGGGG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGPLSIA*VLQTSG
Trigger: CCCCGACGTCTGGAGGACTCAAGCAATGGAGAGCGG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGAGGCCGTGGCCCAGCTaGCACAAAGCTCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGRPWPS*HKAPGI
Trigger: GATCCCTGGAGCTTTGTGTCAGCTGGGCCACGGCCT...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp GTGGCCCAGCTGACACAAAGCTCCAGGGATCAATGCGGCTGCGAAGGGGCGAGGTTCCAGTGTATGCTGTaGCTCCTCCTAAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VAQLTQSSRDQCGCEGARFQCML*LLLRQL
Trigger: CAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAA...CCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAGCTTTGTGTCAGCTGGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR GCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTCAGTTGGGCCGAGACTaGCTGTTCCTGGCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAQLGRD*LFLAPS
Trigger: AGACGGGGCCAGGAACAGGCAGTCTCGGCCCAACTG...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR GCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCGTTGGCATAACCCGCTaGCTTTGGAGACCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLVGITR*LWRPLR
Trigger: CCTGAGGGGTCTCCAAAGGCAGCGGGTTATGCCAAC...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR GCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCATGCCAAAGCCTCCAATaGCGATCACCTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGACQSLQ*RSPPPA
Trigger: GGCTGGAGGAGGTGATCGGCATTGGAGGCTTTGGCA...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTGCCCCTGTACACCTTaGCAAAGCCTCCAATGCCGA +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEACPCTP*QSLQCR
Trigger: TCGGCATTGGAGGCTTTGGCAAGGTGTACAGGGGCA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR GCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGTCGGCCATAAGCTGTaGGAAGGGCTCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGVGHKL*EGLGAG
Trigger: ACCTGCCCCGAGCCCTTCGCACAGCTTATGGCCGAC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCGCTTCCAGCCTTCCTaGATGGAATGGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPRFQPS*MEWKES
Trigger: GGACTCCTTCCATTCCATGCAGGAAGGCTGGAAGCG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTGCACGGTGATGCGGTaGTTGAAGTCGAGTGGCATG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEACTVMR*LKSSGM
Trigger: CATGCCACTCGACTTCAAGCACCGCATCACCGTGCA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCTGCACGGTGATGCGGTaGTTGAAGTCGAGTGGCATG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPCTVMR*LKSSGM
Trigger: CATGCCACTCGACTTCAAGCACCGCATCACCGTGCA...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGTGCCTGGCCTGGCTCTaGAGGCTCCAACTGGATGGC +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGCLAWL*RLQLDG
Trigger: GCCATCCAGTTGGAGCCTGCAGAGCCAGGCCAGGCA...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGATGTGGCTTCGTCCATaGGGGACCTTCTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQMWLRP*GTFSSH
Trigger: ATGGGAGGAGAAGGTCCCGCATGGACGAAGCCACAT...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCATGTGGCTTCGTCCATaGGGGACCTTCTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPMWLRP*GTFSSH
Trigger: ATGGGAGGAGAAGGTCCCGCATGGACGAAGCCACAT...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGGGGTTACCATTGAGTaGTGGGGGTGTGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQGVTIE*WGCGRR
Trigger: TCTCCTTCCACACCCCCAGCACTCAATGGTAACCCC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCGGGGTTACCATTGAGTaGTGGGGGTGTGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPGVTIE*WGCGRR
Trigger: TCTCCTTCCACACCCCCAGCACTCAATGGTAACCCC...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGAGCTCCAGGGATCAATaGGGCTGCGAAGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGSSRDQ*GCEGAR
Trigger: CCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAGCT...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGTCACCATGGCTAGCTTaGAGGGACCCGAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLSPWLA*RDPSFP
Trigger: AGGGAAGCTCGGGTCCCTCCAAGCTAGCCATGGTGA...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCCTTCCTGCATGGAATaGAAGGAGTCCCGCGGCATT +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPPSCME*KESRGI
Trigger: AATGCCGCGGGACTCCTTCCATTCCATGCAGGAAGG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCATCCAGCCTTCCTGCATaGAATGGAAGGAGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGASSLPA*NGRSPA
Trigger: CGCGGGACTCCTTCCATTCCATGCAGGAAGGCTGGA...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCATCGTCGAAGAGACCCTaGATCTCGCGCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGASSKRP*ISRFQP
Trigger: AGGCTGGAAGCGCGAGATCCAGGGTCTCTTCGACGA...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CCA 90 bp CCTAAGGGGGATGAGTCATCTGAATCCAGGTACCATGTGGCTTCGTCCATGCGGGGAACCGGGGAAAGGTaGGCGAATCCCCAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: PKGDESSESRYHVASSMRGTGER*ANPQAR
Trigger: TCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCC...CCGCATGGACGAAGCCACATGGTACCTGGATTCAGATGACTCATCCCCCTTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCAGGCTTGGGGGAACTaGGACCCCAAGCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGQAWGN*DPKPSM
Trigger: CATGCTGGGCTTGGGGTCCCAGTTCCCCCAAGCCTG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTCAGGCTTGGGGGAACTaGGACCCCAAGCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAQAWGN*DPKPSM
Trigger: CATGCTGGGCTTGGGGTCCCAGTTCCCCCAAGCCTG...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCCCGCTGGATCAGCTTaGGCGTCCCAGAGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGPAGSA*ASQSCY
Trigger: GTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTCCCGCTGGATCAGCTTaGGCGTCCCAGAGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAPAGSA*ASQSCY
Trigger: GTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGG...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTCTCTTGGCTGACCGCTaGCCCACAGGGATACCCAGG +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGALLADR*PTGIPR
Trigger: CCTGGGTATCCCTGTGGGCCAGCGGTCAGCCAAGAG...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGAAGGGGTTGGCAGGTaGGGAGTCCCAGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGEGVGR*GVPEGV
Trigger: GACCCCTTCTGGGACTCCCCACCTGCCAACCCCTTC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGGGGCACCCATGTCTTTaGTCTGTGCCCTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLGHPCL*SVPCSP
Trigger: AGGACTGCAGGGCACAGACCAAAGACATGGGTGCCC...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCTCGGGGGAGTGGCCTaGCCCACTCAAGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLALGGVA*PTQGPA
Trigger: AGCGGGGCCTTGAGTGGGCCAGGCCACTCCCCCGAG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCTACAGGTTTCAGATGTaGGGGCGCAGGTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLYRFQM*GRRSPF
Trigger: GAAGGGGGACCTGCGCCCCCACATCTGAAACCTGTA...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGGTAGGGCAGGTGAGCTaGGGGGACCTACAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLVGQVS*GDLQVS
Trigger: TGAAACCTGTAGGTCCCCCCAGCTCACCTGCCCTAC...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGGCTTCTGGCTTCACTaGATCCCGAGGCTAAGACTC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQGFWLH*IPRLRL
Trigger: GAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTCCTTTCTGGGAGGCCTaGGCCAGGTCTCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAPFWEA*ARSPTW
Trigger: CCAAGTGGGAGACCTGGCCCAGGCCTCCCAGAAAGG...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR TCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGTCCCAGAAGGGGTCTaGGTCCGGGAACAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGVPEGV*VREQGP
Trigger: TGGACCTTGTTCCCGGACTCAGACCCCTTCTGGGAC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGTGCTGTTCTGGTGTCTaGTGTAGATCCCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQCCSGV*CRSQAW
Trigger: CCATGCCTGGGATCTACATCAGACACCAGAACAGCA...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR GCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTGCTCACCTCGCCAGCTaGCCCTGTACACCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAAHLAS*PCTPCQ
Trigger: TTGGCAAGGTGTACAGGGGCAGCTGGCGAGGTGAGC...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR GCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCATTTGTGTGGTTTTGTaGCACTCTCGGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAICVVL*HSRARP
Trigger: TGGCCTGGCCCGAGAGTGGCACAAAACCACACAAAT...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGAGCGCCTCCAACTGCTaGAGGATGGAGGCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGSASNC*RMEAKS
Trigger: CGACTTCGCCTCCATCCTGCAGCAGTTGGAGGCGCT...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR GCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTAGCGCCTCCAACTGCTaGAGGATGGAGGCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGASASNC*RMEAKS
Trigger: CGACTTCGCCTCCATCCTGCAGCAGTTGGAGGCGCT...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR GCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGTCCAGCGCCTCCAACTaGTGCAGGATGGAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGSSASN*CRMEAK
Trigger: CTTCGCCTCCATCCTGCAGCAGTTGGAGGCGCTGGA...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR GCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTTCCAGCGCCTCCAACTaGTGCAGGATGGAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGASSASN*CRMEAK
Trigger: CTTCGCCTCCATCCTGCAGCAGTTGGAGGCGCTGGA...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR GCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCCGCTTCCAGCCTTCCTaGATGGAATGGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLRFQPS*MEWKES
Trigger: GGACTCCTTCCATTCCATGCAGGAAGGCTGGAAGCG...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGTGCACGGTGATGCGGTaGTTGAAGTCGAGTGGCATG +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLCTVMR*LKSSGM
Trigger: CATGCCACTCGACTTCAAGCACCGCATCACCGTGCA...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGACCCCAAGCCCAGCATaGTCGCCGCTCTCCATTGCT +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGTPSPA*SPLSIA
Trigger: AGCAATGGAGAGCGGCGAGCATGCTGGGCTTGGGGT...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGATGTGGCTTCGTCCATaGGGGACCTTCTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLMWLRP*GTFSSH
Trigger: ATGGGAGGAGAAGGTCCCGCATGGACGAAGCCACAT...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTACCTCCCCTCCTCCCTaGATCACCCCAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGATSPPP*ITPAGN
Trigger: ATTGCCTGCTGGGGTGATGCAGGGAGGAGGGGAGGT...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGCCAGGACCCCAACCTaGAGGGGCCCAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAARTPT*RGPRPA
Trigger: AGCTGGCCTTGGGCCCCTGCAGGTTGGGGTCCTGGC...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGTTTTTGCGCAGGGGGTaGAGGGAGCGTCCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGFLRRG*RERPQL
Trigger: CAACTGCGGACGCTCCCTCCACCCCCTGCGCAAAAA...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCGGCACTCATTTGTGTaGTTTTGTGCCACTCTCGGG +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPRHSFV*FCATLG
Trigger: CCCGAGAGTGGCACAAAACCACACAAATGAGTGCCG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGTCAATGCCACGGTATaGCACCTCCCCGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGVNATV*HLPGQQ
Trigger: CTGCTGACCGGGGAGGTGCCATACCGTGGCATTGAC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCGTGCTTGAAGTCGAGTaGCATGCTGATACGCTCGCC +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLVLEVE*HADTLA
Trigger: GGCGAGCGTATCAGCATGCCACTCGACTTCAAGCAC...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTTCTGCAGGCTCCAACTaGATGGCTCGGAACCGGGGA +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGASAGSN*MARNRG
Trigger: TCCCCGGTTCCGAGCCATCCAGTTGGAGCCTGCAGA...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGTTACCATTGAGTGCTaGGGGTGTGGAAGGAGATCC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQVTIEC*GCGRRS
Trigger: GGATCTCCTTCCACACCCCCAGCACTCAATGGTAAC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCGCAGCAGCGCCCGCTaGATCAGCTTGGGCGTCCCA +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLARSSAR*ISLGVP
Trigger: TGGGACGCCCAAGCTGATCCAGCGGGCGCTGCTGCG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCACGTCGGGGGCTCTTaGCTGACCGCTGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAHVGGS*LTAGPQ
Trigger: CTGTGGGCCAGCGGTCAGCCAAGAGCCCCCGACGTG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTGTCCTCCCAACCAGCTaGGTACAGTGTTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAVLPTS*VQCWAP
Trigger: TGGGGCCCAACACTGTACCCAGCTGGTTGGGAGGAC...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCTAAGACTCCAACCCTaGCTGGGGCAGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGLRLQP*LGQQEG
Trigger: GCCTTCCTGCTGCCCCAGCCAGGGTTGGAGTCTTAG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGCTTCTGGCTTCACTaGATCCCGAGGCTAAGACTC +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAGFWLH*IPRLRL
Trigger: GAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGTCACCCAGAGGAGAATaGGCCAGAGACCCCGAAACT +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLSPRGE*ARDPET
Trigger: AGTTTCGGGGTCTCTGGCCCATTCTCCTCTGGGTGA...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR TCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGTCCCCCTTCCAGTGTaGAGGCTTCCTGTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGVPLPV*RLPVQC
Trigger: ACACTGCACAGGAAGCCTTCACACTGGAAGGGGGAC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTAGTGCTGGTGACAGCTaGGGCCGGCCCCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLASAGDS*GRPLFP
Trigger: AGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACT...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCATTTGTGTGGTTTTGTaGCACTCTCGGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLICVVL*HSRARP
Trigger: TGGCCTGGCCCGAGAGTGGCACAAAACCACACAAAT...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR GCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCATGCACGGTGATGCGGTaGTTGAAGTCTGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGACTVMR*LKSGIW
Trigger: CCAAATCCCAGACTTCAAGCACCGCATCACCGTGCA...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCGCATCTCGGGCTTCTaGAGGAGGGCACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLARISGF*RRAPRA
Trigger: TGCCCTGGGTGCCCTCCTCCAGAAGCCCGAGATGCG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCTGTCCACACCGGGTTaGCATAACCCGCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGLSTPG*HNPLPL
Trigger: CAAAGGCAGCGGGTTATGCCAACCCGGTGTGGACAG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCCGGCACTCATTTGTGTaGTTTTGTGCCACTCTCGGG +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLRHSFV*FCATLG
Trigger: CCCGAGAGTGGCACAAAACCACACAAATGAGTGCCG...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGTCGTCGAAGAGACCCTaGATCTCGCGCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGSSKRP*ISRFQP
Trigger: AGGCTGGAAGCGCGAGATCCAGGGTCTCTTCGACGA...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGTAGTTCCTTTTCCTTaGCTCGCAGCTCGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAVVPFP*LAARRR
Trigger: TCTTCGACGAGCTGCGAGCCAAGGAAAAGGAACTAC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CCA 90 bp AGGTACCATGTGGCTTCGTCCATGCGGGACCTTCTCCTCCCATTCTGGGCTTCCGTGCTTGAAGTCGAGTaGCATGCTGATACGCTCGCC +
Preference number: 4 (lower is better)
Translates to: RYHVASSMRDLLLPFWASVLEVE*HADTLA
Trigger: GGCGAGCGTATCAGCATGCCACTCGACTTCAAGCAC...GGAAGCCCAGAATGGGAGGAGAAGGTCCCGCATGGACGAAGCCACATGGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGTAGGGCAGGTGAGCTaGGGGGACCTACAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGVGQVS*GDLQVS
Trigger: TGAAACCTGTAGGTCCCCCCAGCTCACCTGCCCTAC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCGCAGTAGCAGGACTTaGTCAAAAGTGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQRSSRT*SKVLVT
Trigger: TGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCG...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp CTGCTACCGCGCTCTGCGGGGACAGGCCTCTTGGGCTCCTCGGGCTCCAGGCTAGCTTTTGAGTTTATTTaGCTTCTGGCTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: LLPRSAGTGLLGSSGSRLAFEFI*LLASLD
Trigger: ATCCAGTGAAGCCAGAAGCCAAATAAACTCAAAAGC...TAGCCTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR TCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCCAGGCCAAAGTCGGTaGTCTTCAGGGTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGPGQSR*SSGSCA
Trigger: AGCACAAGACCCTGAAGATCACCGACTTTGGCCTGG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR TCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGTGGGGAGACAGCTTTTaGGTTTATTTGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQWGDSF*VYLASG
Trigger: GCCAGAAGCCAAATAAACTCAAAAGCTGTCTCCCCA...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGATCTTCAGGGTCTTGTaGTCCATGTCGTCACTCTCA +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQIFRVL*SMSSLS
Trigger: TGAGAGTGACGACATGGAGCACAAGACCCTGAAGAT...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR GCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTATGTGGCTTCGTCCATaGGGGACCTTCTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAMWLRP*GTFSSH
Trigger: ATGGGAGGAGAAGGTCCCGCATGGACGAAGCCACAT...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGGGGTTACCATTGAGTaGTGGGGGTGTGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGGVTIE*WGCGRR
Trigger: TCTCCTTCCACACCCCCAGCACTCAATGGTAACCCC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGTGTGAAGGCTTCCTGTaGAGTGTAGTGTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLCEGFL*SVVFLT
Trigger: GGTCAGGAACACTACACTGCACAGGAAGCCTTCACA...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCCAAGCTCCTCTCTGTaGTTTCAACTGTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLPSSSL*FQLSQL
Trigger: GAGTTGGGACAGTTGAAAGCACAGAGAGGAGCTTGG...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCCCGAGACACATAGTTaGACGGGAAGATGCCCACCT +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGPETHS*TGRCPP
Trigger: AGGTGGGCATCTTCCCGTCCAACTATGTGTCTCGGG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCCTTCCTGCATGGAATaGAAGGAGTCCCGCGGCATT +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGPSCME*KESRGI
Trigger: AATGCCGCGGGACTCCTTCCATTCCATGCAGGAAGG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGTAGTTCCTTTTCCTTaGCTCGCAGCTCGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAVVPFP*LAARRR
Trigger: TCTTCGACGAGCTGCGAGCCAAGGAAAAGGAACTAC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGTGCTTGAAGTCGAGTaGCATGCTGATACGCTCGCC +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGVLEVE*HADTLA
Trigger: GGCGAGCGTATCAGCATGCCACTCGACTTCAAGCAC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTAATCCAGGTACCATGTaGCTTCGTCCATGCGGGACC +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGANPGTM*LRPCGT
Trigger: GGTCCCGCATGGACGAAGCCACATGGTACCTGGATT...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGAATCCAGGTACCATGTaGCTTCGTCCATGCGGGACC +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGNPGTM*LRPCGT
Trigger: GGTCCCGCATGGACGAAGCCACATGGTACCTGGATT...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGGTTACCATTGAGTGCTGGGGGTGTGGAAGGAGATCCTAAGGGGGATGAGTCAGTAGGGCAGGTGAGCTaGGGGGACCTACAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: GLPLSAGGVEGDPKGDESVGQVS*GDLQVS
Trigger: TGAAACCTGTAGGTCCCCCCAGCTCACCTGCCCTAC...TGACTCATCCCCCTTAGGATCTCCTTCCACACCCCCAGCACTCAATGGTAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CCA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCCGCAGTAGCAGGACTTaGTCAAAAGTGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLRSSRT*SKVLVT
Trigger: TGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCG...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGACTCCAACCCTGGCTaGGGCAGCAGGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLADSNPG*GSRKAS
Trigger: GGATGCCTTCCTGCTGCCCCAGCCAGGGTTGGAGTC...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTGGCTTCTGGCTTCACTaGATCCCGAGGCTAAGACTC +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAGFWLH*IPRLRL
Trigger: GAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGAGTTTATTTGGCTTCTaGCTTCACTGGATCCCGAGG +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQSLFGF*LHWIPR
Trigger: CCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAACT...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCAGTTTATTTGGCTTCTaGCTTCACTGGATCCCGAGG +
Preference number: 4 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEASLFGF*LHWIPR
Trigger: CCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAACT...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCTACCTCCCCGCTCCTaGCTCTGCCAGCTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLALPPRS*LCQLLS
Trigger: GCTTAGCAGCTGGCAGAGCCAGGAGCGGGGAGGTAG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCATTGAGCCCCTGGGTCTaGATAAGGAAAGCTACTCGT +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGALSPWV*IRKATR
Trigger: ACGAGTAGCTTTCCTTATCCAGACCCAGGGGCTCAA...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGGCTTTCTTGAGCCCCTaGGTCTGGATAAGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLAFLSP*VWIRKA
Trigger: AGCTTTCCTTATCCAGACCCAGGGGCTCAAGAAAGC...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS-3UTR TCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCATGGGGAGACAGCTTTTaGGTTTATTTGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAWGDSF*VYLASG
Trigger: GCCAGAAGCCAAATAAACTCAAAAGCTGTCTCCCCA...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTATGGCTGTGAGACTGTaGCCAGCCTCACTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAMAVRL*PASLLS
Trigger: AGAAAGCAGTGAGGCTGGTCACAGTCTCACAGCCAT...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS-3UTR GCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTAGTTGGACGGGAAGATaGCCACCTGGCCACCCACCT +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLASWTGR*PPGHPP
Trigger: AGGTGGGTGGCCAGGTGGGCATCTTCCCGTCCAACT...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR GCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCATGTCTTTGGTCTGTaGCCTGCAGTCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAHVFGL*PAVLGA
Trigger: GGCCCCCAGGACTGCAGGGCACAGACCAAAGACATG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTACCTCCCCTCCTCCCTaGATCACCCCAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLATSPPP*ITPAGN
Trigger: ATTGCCTGCTGGGGTGATGCAGGGAGGAGGGGAGGT...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGACTTGAGATCACGGTaGATGACGGGCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLADLRSR*MTGTRA
Trigger: GGCCCTGGTGCCCGTCATCCACCGTGATCTCAAGTC...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCAGGCTCCAACTGGATaGCTCGGAACCGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAQAPTG*LGTGER
Trigger: CCTTTCCCCGGTTCCGAGCCATCCAGTTGGAGCCTG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGTCCTCCCAACCAGCTaGGTACAGTGTTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAVLPTS*VQCWAP
Trigger: TGGGGCCCAACACTGTACCCAGCTGGTTGGGAGGAC...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGAGTTTATTTGGCTTCTaGCTTCACTGGATCCCGAGG +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLSLFGF*LHWIPR
Trigger: CCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAACT...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAAGTTTATTTGGCTTCTaGCTTCACTGGATCCCGAGG +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGASLFGF*LHWIPR
Trigger: CCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAACT...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCCCTTTAGGGCTCCCTaGCCTCTGATAGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAPFRAP*PLIGTW
Trigger: CCAGGTCCCTATCAGAGGCCAGGGAGCCCTAAAGGG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR CCA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCACTTCTTTGTACTTGTaGTCTTTCTGCTACCTCCCC +
Preference number: 4 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPTSLYL*SFCYLP
Trigger: GGGGAGGTAGCAGAAAGACCACAAGTACAAAGAAGT...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR TCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTTCTCGGCTGTCACACTaGTGTCCTCATCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLASRLSH*CPHRGP
Trigger: AGGACCCCGATGAGGACATCAGTGTGACAGCCGAGA...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR TCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGTCCCCCTTCCAGTGTaGAGGCTTCCTGTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAVPLPV*RLPVQC
Trigger: ACACTGCACAGGAAGCCTTCACACTGGAAGGGGGAC...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCTCGCCGCTCTCCATTaGTTGAGTCCTCCAGACGTC +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLALAALH*LSPPDV
Trigger: GACGTCTGGAGGACTCAAGCAATGGAGAGCGGCGAG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGTCACTCTCAATGGGCTaGAGCAGCAAAACCAAAGTT +
Preference number: 4 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLSLSMG*SSKTKV
Trigger: AACTTTGGTTTTGCTGCTGCAGCCCATTGAGAGTGA...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR CCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTGTAGTTCCTTTTCCTTaGCTCGCAGCTCGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAVVPFP*LAARRR
Trigger: TCTTCGACGAGCTGCGAGCCAAGGAAAAGGAACTAC...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCACCCATGTCTTTaGTCTGTGCCCTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAGHPCL*SVPCSP
Trigger: AGGACTGCAGGGCACAGACCAAAGACATGGGTGCCC...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR TCA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTTGGGGAGACAGCTTTTaGGTTTATTTGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAWGDSF*VYLASG
Trigger: GCCAGAAGCCAAATAAACTCAAAAGCTGTCTCCCCA...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGTGTCGTCACTCTCAATaGGCTGCAGCAGCAAAATGT +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGCRHSQ*AAAAKC
Trigger: ACATTTTGCTGCTGCAGCCCATTGAGAGTGACGACA...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGCTTTTGAGTTTATTTaGCTTCTGGCTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQAFEFI*LLASLD
Trigger: ATCCAGTGAAGCCAGAAGCCAAATAAACTCAAAAGC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR GCA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGTCACTCTCAATGGGCTaGAGCAGCAAAATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGSLSMG*SSKMLL
Trigger: CAACAACATTTTGCTGCTGCAGCCCATTGAGAGTGA...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR GCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCTAAGCCCCATCCTCTaGTTTCTCTCCAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLALSPIL*FLSKLL
Trigger: GAGGAGCTTGGAGAGAAAGCAGAGGATGGGGCTTAG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGTTACCATTGAGTGCTaGGGGTGTGGAAGGAGATCC +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAVTIEC*GCGRRS
Trigger: GGATCTCCTTCCACACCCCCAGCACTCAATGGTAAC...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCTTTTGAGTTTATTTaGCTTCTGGCTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAAFEFI*LLASLD
Trigger: ATCCAGTGAAGCCAGAAGCCAAATAAACTCAAAAGC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTCGCAGTAGCAGGACTTaGTCAAAAGTGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLARSSRT*SKVLVT
Trigger: TGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCG...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTTGTCGTCACTCTCAATaGGCTGCAGCAGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: FIWLLASLDPEAKTPTLACRHSQ*AAAAKP
Trigger: TGGTTTTGCTGCTGCAGCCCATTGAGAGTGACGACA...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS GCA 90 bp GTCCCGCGGCGGCGGCGCACGTGCGGTCGCTCGCGGTCCACCTGCTaGAGCAGCAGCGTCAGCTCGCGCTCGAACACCTCTAGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: VPRRRRTCGRSRSTC*SSSVSSRSNTSSSH
Trigger: GTGGGAGCTAGAGGTGTTCGAGCGCGAGCTGACGCTGCTGCTGCAGCAGGTGGACCGCGAGCGACCGCACGTGCGCCGCCGCCGCGGGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000524856.1
ENST00000530153.5
ENST00000533032.1
CDS GCA 90 bp GCCCGGAGCTTGCTGCGCTTGAATGTCCCGCGGCGGCGGCGCACGTaGGGTCGCTCGCGGTCCACCTGCTGCAGCAGCAGCGTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: ARSLLRLNVPRRRRT*GRSRSTCCSSSVSS
Trigger: CGAGCTGACGCTGCTGCTGCAGCAGGTGGACCGCGAGCGACCGCACGTGCGCCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCCGGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000524856.1
ENST00000530153.5
ENST00000533032.1
CDS-3UTR CAA 90 bp CTGCTACCGCGCTCTGCGGGGACAGGCCTCTTGGGCTCCTCGGGCTCCAGGCTACGGAGCTTGCTGCGCTaGAATGTCCCGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: LLPRSAGTGLLGSSGSRLRSLLR*NVPRRR
Trigger: CCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCCG...TAGCCTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS GCA 90 bp CGCGGCATTTCCCGTAGGACCTGTGCCTCCAGCGCCTCCAACTGCTaGAGGATGGAGGCGAAGTCGGGCCTGCGGTGGGGGTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: RGISRRTCASSASNC*RMEAKSGLRWGSCA
Trigger: GGCGCAGGACCCCCACCGCAGGCCCGACTTCGCCTCCATCCTGCAGCAGTTGGAGGCGCTGGAGGCACAGGTCCTACGGGAAATGCCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000530153.5
ENST00000530949.1
ENST00000533032.1
CDS-3UTR CAA 90 bp CTGCTACCGCGCTCTGCGGGGACAGGCCTCTTGGGCTCCTCGGGCTCCAGGCTATCGCGCGCCCGGAGCTaGCTGCGCTTGAATGTCCCG +
Preference number: 5 (lower is better)
Translates to: LLPRSAGTGLLGSSGSRLSRARS*LRLNVP
Trigger: CGGGACATTCAAGCGCAGCAAGCTCCGGGCGCGCGA...TAGCCTGGAGCCCGAGGAGCCCAAGAGGCCTGTCCCCGCAGAGCGCGGTAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS GCA 90 bp TCCCGCGGCATTTCCCGTAGGACCTGTGCCTCCAGCGCCTCCAACTaGTGCAGGATGGAGGCGAAGTCGGGCCTGCGGTGGGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SRGISRRTCASSASN*CRMEAKSGLRWGSC
Trigger: GCAGGACCCCCACCGCAGGCCCGACTTCGCCTCCATCCTGCAGCAGTTGGAGGCGCTGGAGGCACAGGTCCTACGGGAAATGCCGCGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000530153.5
ENST00000530949.1
ENST00000533032.1
CDS CCA 90 bp GGAGGTCAGGCCCAGGCCGGGCTGGCTGGTCAGTCCTGTGACTCGTaGGCCTGGAGAATTCCCCCTCCTCTCCCCGCCAGGCTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: GGQAQAGLAGQSCDS*AWRIPPPLPARLPH
Trigger: GTGAGGAAGCCTGGCGGGGAGAGGAGGGGGAATTCTCCAGGCCCACGAGTCACAGGACTGACCAGCCAGCCCGGCCTGGGCCTGACCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS-3UTR CAA 90 bp CTCCAGGGATCAATGCGGCTGCGAAGGGGCGAGGGCCGAGGTCGGCTGATGAGGTCACGTCGGGGGCTCTaGGCTGACCGCTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: LQGSMRLRRGEGRGRLMRSRRGL*ADRWPT
Trigger: TGTGGGCCAGCGGTCAGCCAAGAGCCCCCGACGTGA...CCTCATCAGCCGACCTCGGCCCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS GCA 90 bp TCTTCTCCCTCCTGCAGGAAACAGCATCAGATGACGCGGGCGGCCTaGACCGCTCCCCTCCCAGAGGCTCCAGGCGGGGAGTTCCCGGGT +
Preference number: 5 (lower is better)
Translates to: SSPSCRKQHQMTRAA*TAPLPEAPGGEFPG
Trigger: ACCCGGGAACTCCCCGCCTGGAGCCTCTGGGAGGGGAGCGGTGCAGGCCGCCCGCGTCATCTGATGCTGTTTCCTGCAGGAGGGAGAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS-3UTR CAA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCCGGAGCTTGCTGCGCTaGAATGTCCCGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPRSLLR*NVPRRR
Trigger: CCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCCG...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp CTCCAGGGATCAATGCGGCTGCGAAGGGGCGAGGGCCGAGGTCGGCTGATGAGGGCCGCTCTCCATTGCTaGAGTCCTCCAGACGTCGGG +
Preference number: 5 (lower is better)
Translates to: LQGSMRLRRGEGRGRLMRAALHC*SPPDVG
Trigger: CCCGACGTCTGGAGGACTCAAGCAATGGAGAGCGGC...CCTCATCAGCCGACCTCGGCCCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CAA 90 bp CCGCTGGATCAGCTTGGGCGTCCCAGAGCTGCTACCGCGCTCTGCGGGGACAGGTGGGCACCCATGTCTTaGGTCTGTGCCCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: PLDQLGRPRAATALCGDRWAPMS*VCALQS
Trigger: GGACTGCAGGGCACAGACCAAAGACATGGGTGCCCA...CCTGTCCCCGCAGAGCGCGGTAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CAA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCACGGAGCTTGCTGCGCTaGAATGTCCCGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: WLLASLDPEAKTPTLAGARSLLR*NVPRRR
Trigger: CCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCCG...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp ACCCAGGTCCAGCAACAGGGGTGCAGGAGTGGGCGGGGAGTCGGGCGTCTTGAGGCTCGCCGCTCTCCATaGCTTGAGTCCTCCAGACGT +
Preference number: 5 (lower is better)
Translates to: TQVQQQGCRSGRGVGRLEARRSP*LESSRR
Trigger: ACGTCTGGAGGACTCAAGCAATGGAGAGCGGCGAGC...CTCAAGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGTTGCTGGACCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CAA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTCACGTCGGGGGCTCTaGGCTGACCGCTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEASRRGL*ADRWPT
Trigger: TGTGGGCCAGCGGTCAGCCAAGAGCCCCCGACGTGA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS TCA 90 bp CCCAGGCCCGACCTCGAAGACGTTTCTCCTCCGGTCAAGGCCGGGTaGGGCCTGCACGGTGATGCGGTGCTTGAAGTCGAGTGGCATGCT +
Preference number: 5 (lower is better)
Translates to: PRPDLEDVSPPVKAG*GLHGDAVLEVEWHA
Trigger: AGCATGCCACTCGACTTCAAGCACCGCATCACCGTGCAGGCCTCACCCGGCCTTGACCGGAGGAGAAACGTCTTCGAGGTCGGGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000524856.1
ENST00000530153.5
CDS GCA 90 bp TCCGTGGGTGGATGTGTCCTGGGCCAGGGAGCTCTGTACCTCACCTaGCCTCCCCGTCCTCTTACCGGCCATAAGCTGTGCGAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: SVGGCVLGQGALYLT*PPRPLTGHKLCEGL
Trigger: GAGCCCTTCGCACAGCTTATGGCCGGTAAGAGGACGGGGAGGGCAGGTGAGGTACAGAGCTCCCTGGCCCAGGACACATCCACCCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524856.1
ENST00000530949.1
CDS-3UTR CAA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCTCGCGCGCCCGGAGCTaGCTGCGCTTGAATGTCCCG +
Preference number: 5 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLSRARS*LRLNVP
Trigger: CGGGACATTCAAGCGCAGCAAGCTCCGGGCGCGCGA...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp CTCCAGGGATCAATGCGGCTGCGAAGGGGCGAGGGCCGAGGTCGGCTGATGAGGACGGTGATGCGGTGCTaGAAGTCGAGTGGCATGCTG +
Preference number: 5 (lower is better)
Translates to: LQGSMRLRRGEGRGRLMRTVMRC*KSSGML
Trigger: CAGCATGCCACTCGACTTCAAGCACCGCATCACCGT...CCTCATCAGCCGACCTCGGCCCTCGCCCCTTCGCAGCCGCATTGATCCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS TCA 90 bp CCCAGGCCCGACCTCGAAGACGTTTCTCCTCCGGTCAAGGCCGGGTaGGGCCTGCACGGTGATGCGGTGCTTGAAGTCTGGGATTTGGGT +
Preference number: 5 (lower is better)
Translates to: PRPDLEDVSPPVKAG*GLHGDAVLEVWDLG
Trigger: ACCCAAATCCCAGACTTCAAGCACCGCATCACCGTGCAGGCCTCACCCGGCCTTGACCGGAGGAGAAACGTCTTCGAGGTCGGGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS-3UTR CAA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGTCCGGTTGGGTCTTTTaGCGCAGGGGGTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQSGWVF*RRGWRE
Trigger: CTCCCTCCACCCCCTGCGCAAAAAGACCCAACCGGA...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CAA 90 bp ACCCAGGTCCAGCAACAGGGGTGCAGGAGTGGGCGGGGAGTCGGGCGTCTTGAGCTCATTTGTGTGGTTTaGTGCCACTCTCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: TQVQQQGCRSGRGVGRLELICVV*CHSRAR
Trigger: CCTGGCCCGAGAGTGGCACAAAACCACACAAATGAG...CTCAAGACGCCCGACTCCCCGCCCACTCCTGCACCCCTGTTGCTGGACCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CAA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCCCGCTGGATCAGCTaGGGCGTCCCAGAGCTGCTA +
Preference number: 5 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAARWIS*GVPELL
Trigger: TAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGGC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CAA 90 bp GGAGAAGGCCGTGGCCCAGCTGACACAAAGCTCCAGGGATCAATGCGGCTGCGAGGGGAGTCGGGCGTCTaGAGCGAGAAGCAGATGAGC +
Preference number: 5 (lower is better)
Translates to: GEGRGPADTKLQGSMRLRGESGV*SEKQMS
Trigger: GCTCATCTGCTTCTCGCTCAAGACGCCCGACTCCCC...TCGCAGCCGCATTGATCCCTGGAGCTTTGTGTCAGCTGGGCCACGGCCTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CAA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGGGAGTCGGGCGTCTaGAGCGAGAAGCAGATGAGC +
Preference number: 5 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAGESGV*SEKQMS
Trigger: GCTCATCTGCTTCTCGCTCAAGACGCCCGACTCCCC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CAA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGGCCAGGTCTCCCACTaGGGAGGGGGAGTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQGQVSH*GGGVLL
Trigger: CAAAAGGACTCCCCCTCCCAAGTGGGAGACCTGGCC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS GCA 90 bp CCGACCTCGAAGACGTTTCTCCTCCGGTCAAGGCCGGGTGAGGCCTaGACGGTGATGCGGTGCTTGAAGTCGAGTGGCATGCTGATACGC +
Preference number: 5 (lower is better)
Translates to: PTSKTFLLRSRPGEA*TVMRCLKSSGMLIR
Trigger: GCGTATCAGCATGCCACTCGACTTCAAGCACCGCATCACCGTGCAGGCCTCACCCGGCCTTGACCGGAGGAGAAACGTCTTCGAGGTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000524856.1
ENST00000530153.5
CDS GCA 90 bp AGAGGAGAATGGGCCAGAGACCCCGAAACTGGGGGAAGCTCTCAGTaGCCCTTTAGGGCTCCCTGGCCTCTGATAGGGACCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: RGEWARDPETGGSSQ*PFRAPWPLIGTWPP
Trigger: TGGTGGCCAGGTCCCTATCAGAGGCCAGGGAGCCCTAAAGGGGCACTGAGAGCTTCCCCCAGTTTCGGGGTCTCTGGCCCATTCTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527304.1
ENST00000530153.5
CDS-3UTR CAA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCCTGCCCCTGTACACCTaGCCAAAGCCTCCAATGCCG +
Preference number: 5 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEALPLYT*PKPPMP
Trigger: CGGCATTGGAGGCTTTGGCAAGGTGTACAGGGGCAG...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CAA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGTCGCGCGCCCGGAGCTaGCTGCGCTTGAATGTCCCG +
Preference number: 5 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGSRARS*LRLNVP
Trigger: CGGGACATTCAAGCGCAGCAAGCTCCGGGCGCGCGA...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCGCCGCTCTCCATTGCTaGAGTCCTCCAGACGTCGGG +
Preference number: 5 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLAALHC*SPPDVG
Trigger: CCCGACGTCTGGAGGACTCAAGCAATGGAGAGCGGC...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CAA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCCGCTCTCCATTGCTaGAGTCCTCCAGACGTCGGG +
Preference number: 5 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAAALHC*SPPDVG
Trigger: CCCGACGTCTGGAGGACTCAAGCAATGGAGAGCGGC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CAA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCGCTCGCCGCTCTCCATaGCTTGAGTCCTCCAGACGT +
Preference number: 5 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPARRSP*LESSRR
Trigger: ACGTCTGGAGGACTCAAGCAATGGAGAGCGGCGAGC...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CAA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGTCACGTCGGGGGCTCTaGGCTGACCGCTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGSRRGL*ADRWPT
Trigger: TGTGGGCCAGCGGTCAGCCAAGAGCCCCCGACGTGA...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CAA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCTGGGCACCCATGTCTTaGGTCTGTGCCCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAWAPMS*VCALQS
Trigger: GGACTGCAGGGCACAGACCAAAGACATGGGTGCCCA...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS TCA 90 bp CCAGCCCTGGCCTTAGCCTTGACTGCCAAGGAGGGCTTCCCTCTCTaGGATATCTGTTCTGGAGGAGCTGCCCATGACGACGGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: PALALALTAKEGFPL*DICSGGAAHDDGRG
Trigger: TCCCCTCCCGTCGTCATGGGCAGCTCCTCCAGAACAGATATCTCAGAGAGGGAAGCCCTCCTTGGCAGTCAAGGCTAAGGCCAGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 90 bp TCGAAGAGACCCTGGATCTCGCGCTTCCAGCCTTCCTGCATGGAATaGAAGGAGTCCCGCGGCATTTCCCGTAGGACCTGTGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SKRPWISRFQPSCME*KESRGISRRTCASS
Trigger: GCTGGAGGCACAGGTCCTACGGGAAATGCCGCGGGACTCCTTCCATTCCATGCAGGAAGGCTGGAAGCGCGAGATCCAGGGTCTCTTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000530153.5
ENST00000533032.1
CDS CCA 90 bp CGATCCAGCCCTCAAATGTCCATCTCCATGGCTGAGGACCCGCTGTaGGTTGGGGATCGCAGGTCGGGCTTGCCCAAGCTGTTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: RSSPQMSISMAEDPL*VGDRRSGLPKLLSC
Trigger: ACAGCTCAACAGCTTGGGCAAGCCCGACCTGCGATCCCCAACCCACAGCGGGTCCTCAGCCATGGAGATGGACATTTGAGGGCTGGATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 90 bp TCACACCTCTTCCGCTTTCCTCCCGTGGTCCCTACTTCTCCTTTCTaGGAGGCCTGGGCCAGGTCTCCCACTTGGGAGGGGGAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: SHLFRFPPVVPTSPF*EAWARSPTWEGESF
Trigger: AAAGGACTCCCCCTCCCAAGTGGGAGACCTGGCCCAGGCCTCCCAGAAAGGAGAAGTAGGGACCACGGGAGGAAAGCGGAAGAGGTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527304.1
ENST00000530153.5
CDS-3UTR CAA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCATCACCAGGCACAGGTaGGGCTCCTCCAGGCACACA +
Preference number: 5 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLITRHR*GSSRHT
Trigger: TGTGTGCCTGGAGGAGCCCAACCTGTGCCTGGTGAT...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CAA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCACGGTGATGCGGTGCTaGAAGTCGAGTGGCATGCTG +
Preference number: 5 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEATVMRC*KSSGML
Trigger: CAGCATGCCACTCGACTTCAAGCACCGCATCACCGT...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGCTCGCCGCTCTCCATaGCTTGAGTCCTCCAGACGT +
Preference number: 5 (lower is better)
Translates to: WLLASLDPEAKTPTLAGAARRSP*LESSRR
Trigger: ACGTCTGGAGGACTCAAGCAATGGAGAGCGGCGAGC...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CAA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCGCTCGCCGCTCTCCATaGCTTGAGTCCTCCAGACGT +
Preference number: 5 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLARRSP*LESSRR
Trigger: ACGTCTGGAGGACTCAAGCAATGGAGAGCGGCGAGC...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CAA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCCCGCTGGATCAGCTaGGGCGTCCCAGAGCTGCTA +
Preference number: 5 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGARWIS*GVPELL
Trigger: TAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGGC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS-3UTR CAA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGTGGGCACCCATGTCTTaGGTCTGTGCCCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLWAPMS*VCALQS
Trigger: GGACTGCAGGGCACAGACCAAAGACATGGGTGCCCA...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS CCA 90 bp GAGCTCCTACCTGCAGTAGACCCTAAGCTAGGCTCAGTGGAAGGTTaGGAGCAGGTGTGTACCAGAGCCATGCCACCCCCAACCATGCCC +
Preference number: 5 (lower is better)
Translates to: ELLPAVDPKLGSVEG*EQVCTRAMPPPTMP
Trigger: GGGCATGGTTGGGGGTGGCATGGCTCTGGTACACACCTGCTCCCAACCTTCCACTGAGCCTAGCTTAGGGTCTACTGCAGGTAGGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 90 bp GATTGTGGATGCTCCAGGATCAGGTGGTGGGGACAGGGTAAGAGCTaGGAGCAAACTCATCTGACGGACATCCTGGCTGGGTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: DCGCSRIRWWGQGKS*EQTHLTDILAGSWG
Trigger: CCCCCAGGACCCAGCCAGGATGTCCGTCAGATGAGTTTGCTCCCAGCTCTTACCCTGTCCCCACCACCTGATCCTGGAGCATCCACAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534110.1
CDS-3UTR CAA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCGCCTCAACTCCGGTaGGGTCTTTTTGCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGAPQLR*GLFAQG
Trigger: CCCCTGCGCAAAAAGACCCAACCGGAGTTGAGGCGC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CAA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGCTCACCATGGCTAGCTaGGAGGGACCCGAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGLTMAS*EGPELP
Trigger: GGGAAGCTCGGGTCCCTCCAAGCTAGCCATGGTGAG...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CAA 90 bp GGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAGGACCCTAGAGGGCTCTaGAGGAAGAGGCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: GFWLHWIPRLRLQPWLGQDPRGL*RKRLFK
Trigger: CTTGAAGAGCCTCTTCCTCAAGAGCCCTCTAGGGTC...CTGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CAA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCATCCAGGCACACAGCCTaGAGGGCAATGATGTTGGGG +
Preference number: 5 (lower is better)
Translates to: WLLASLDPEAKTPTLAGASRHTA*RAMMLG
Trigger: CCCCAACATCATTGCCCTCAAGGCTGTGTGCCTGGA...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CAA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCGAGAAGGTGGAGGCCTaGATAACCTCAGGAGCCATC +
Preference number: 5 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPEKVEA*ITSGAI
Trigger: GATGGCTCCTGAGGTTATCAAGGCCTCCACCTTCTC...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGAGAAGGTGGAGGCCTaGATAACCTCAGGAGCCATC +
Preference number: 5 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEAEKVEA*ITSGAI
Trigger: GATGGCTCCTGAGGTTATCAAGGCCTCCACCTTCTC...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp TGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCAACGGTGATGCGGTGCTaGAAGTCGAGTGGCATGCTG +
Preference number: 5 (lower is better)
Translates to: WLLASLDPEAKTPTLAGATVMRC*KSSGML
Trigger: CAGCATGCCACTCGACTTCAAGCACCGCATCACCGT...TGCCCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp GGGTTACCATTGAGTGCTGGGGGTGTGGAAGGAGATCCTAAGGGGGATGAGTCAGCCCGCTGGATCAGCTaGGGCGTCCCAGAGCTGCTA +
Preference number: 5 (lower is better)
Translates to: GLPLSAGGVEGDPKGDESARWIS*GVPELL
Trigger: TAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGGC...TGACTCATCCCCCTTAGGATCTCCTTCCACACCCCCAGCACTCAATGGTAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS-3UTR CAA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGGGGAGTCGGGCGTCTaGAGCGAGAAGCAGATGAGC +
Preference number: 5 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGGESGV*SEKQMS
Trigger: GCTCATCTGCTTCTCGCTCAAGACGCCCGACTCCCC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS TCA 90 bp CTTAACTTGTCCAAACCGCAGCTGCAGGCTGGGGTCAAGGACTTCTaGAGCTGGCGCAGGAAGACTCTGCTGGGTGCCTGGGGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: LNLSKPQLQAGVKDF*SWRRKTLLGAWGSV
Trigger: AACAGAGCCCCAGGCACCCAGCAGAGTCTTCCTGCGCCAGCTTCAGAAGTCCTTGACCCCAGCCTGCAGCTGCGGTTTGGACAAGTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 90 bp CAGGGAGGGCTAGGCCAGAATTCCAGCCCTGGCCTTAGCCTTGACTaGCAAGGAGGGCTTCCCTCTCTGAGATATCTGTTCTGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: QGGLGQNSSPGLSLD*QGGLPSLRYLFWRS
Trigger: GCTCCTCCAGAACAGATATCTCAGAGAGGGAAGCCCTCCTTGGCAGTCAAGGCTAAGGCCAGGGCTGGAATTCTGGCCTAGCCCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 90 bp TGGCTCTGTTTCTGTGTCCTCCACCTTCAGCCATTTCGGCGCTGGTaGTTCTCAGAGCATGACCTCTCCTCAACCTCTGCCCACTGCCCC +
Preference number: 5 (lower is better)
Translates to: WLCFCVLHLQPFRRW*FSEHDLSSTSAHCP
Trigger: GGGGCAGTGGGCAGAGGTTGAGGAGAGGTCATGCTCTGAGAAGCACCAGCGCCGAAATGGCTGAAGGTGGAGGACACAGAAACAGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 90 bp CTCAGTAGTTCCTTTTCCTTGGCTCGCAGCTCGTCGAAGAGACCCTaGATCTCGCGCTTCCAGCCTTCCGGCCATAAGCTGTGCGAAGGG +
Preference number: 5 (lower is better)
Translates to: LSSSFSLARSSSKRP*ISRFQPSGHKLCEG
Trigger: CCCTTCGCACAGCTTATGGCCGGAAGGCTGGAAGCGCGAGATCCAGGGTCTCTTCGACGAGCTGCGAGCCAAGGAAAAGGAACTACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS CCA 90 bp AGAGGTGAAGTTTCTTACACTGGATGGCTCGGAACCGGGGAAAGGTaGGCGAATCCCCAGGCCCGACCTCGAAGACGTTTCTCCTCCGGT +
Preference number: 5 (lower is better)
Translates to: RGEVSYTGWLGTGER*ANPQARPRRRFSSG
Trigger: ACCGGAGGAGAAACGTCTTCGAGGTCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCCGAGCCATCCAGTGTAAGAAACTTCACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS-3UTR CAA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCGTGATCTTCAGGGTCTaGTGCTCCATGTCGTCACTC +
Preference number: 5 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPVIFRV*CSMSSL
Trigger: GAGTGACGACATGGAGCACAAGACCCTGAAGATCAC...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR CAA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCTCATTTGTGTGGTTTaGTGCCACTCTCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLLICVV*CHSRAR
Trigger: CCTGGCCCGAGAGTGGCACAAAACCACACAAATGAG...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCAGTAGTTCCTTTTCCTaGGCTCGCAGCTCGTCGAAG +
Preference number: 5 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEASSSFS*ARSSSK
Trigger: CTTCGACGAGCTGCGAGCCAAGGAAAAGGAACTACT...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp TCCTCCCTGCATCACCCCAGCAGGCAATTCCCTGAGACAGGCTCTGGTCCTCCCAGTAGTTCCTTTTCCTaGGCTCGCAGCTCGTCGAAG +
Preference number: 5 (lower is better)
Translates to: SSLHHPSRQFPETGSGPPSSSFS*ARSSSK
Trigger: CTTCGACGAGCTGCGAGCCAAGGAAAAGGAACTACT...GGGAGGACCAGAGCCTGTCTCAGGGAATTGCCTGCTGGGGTGATGCAGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCACGGTGATGCGGTGCTaGAAGTCTGGGATTTGGGTT +
Preference number: 5 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEATVMRC*KSGIWV
Trigger: AACCCAAATCCCAGACTTCAAGCACCGCATCACCGT...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS TCA 90 bp GGAGGGCTTCCCTCTCTGAGATATCTGTTCTGGAGGAGCTGCCCATaGCGACGGGAGGGGAGGACAGAGCACCAACTCCACGAACATGAA +
Preference number: 5 (lower is better)
Translates to: GGLPSLRYLFWRSCP*RREGRTEHQLHEHE
Trigger: TTCATGTTCGTGGAGTTGGTGCTCTGTCCTCCCCTCCCGTCGTCATGGGCAGCTCCTCCAGAACAGATATCTCAGAGAGGGAAGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS TCA 90 bp TGGGAGATGGAGTCTCCCTTAGCCCAGCACTCCCATCCCAAGCACTaGTTTCAGGCTAGGCCCTCTTGGCGATCCAGCCCTCAAATGTCC +
Preference number: 5 (lower is better)
Translates to: WEMESPLAQHSHPKH*FQARPSWRSSPQMS
Trigger: GGACATTTGAGGGCTGGATCGCCAAGAGGGCCTAGCCTGAAATCAGTGCTTGGGATGGGAGTGCTGGGCTAAGGGAGACTCCATCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 90 bp CTACCTCCCCGCTCCTGGCTCTGCCAGCTGCTAAGCCCCATCCTCTaGTTTCTCTCCAAGCTCCTCTCTGTGCTTTCAACTGTCCCAACT +
Preference number: 5 (lower is better)
Translates to: LPPRSWLCQLLSPIL*FLSKLLSVLSTVPT
Trigger: AGTTGGGACAGTTGAAAGCACAGAGAGGAGCTTGGAGAGAAAGCAGAGGATGGGGCTTAGCAGCTGGCAGAGCCAGGAGCGGGGAGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527304.1
ENST00000530153.5
CDS CCA 90 bp GCTTGGCTCTGTTTCTGTGTCCTCCACCTTCAGCCATTTCGGCGCTaGTGCTTCTCAGAGCATGACCTCTCCTCAACCTCTGCCCACTGC +
Preference number: 5 (lower is better)
Translates to: AWLCFCVLHLQPFRR*CFSEHDLSSTSAHC
Trigger: GCAGTGGGCAGAGGTTGAGGAGAGGTCATGCTCTGAGAAGCACCAGCGCCGAAATGGCTGAAGGTGGAGGACACAGAAACAGAGCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS-3UTR CAA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTAGGGAGCGTCCGCAGTaGGGCCGAGACTGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: FIWLLASLDPEAKTPTLARERPQ*GRDCLF
Trigger: GAACAGGCAGTCTCGGCCCAACTGCGGACGCTCCCT...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CAA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCGTGATCTTCAGGGTCTaGTGCTCCATGTCGTCACTC +
Preference number: 5 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLVIFRV*CSMSSL
Trigger: GAGTGACGACATGGAGCACAAGACCCTGAAGATCAC...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS-3UTR CAA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGCCCGCGGCACTCATTaGTGTGGTTTTGTGCCACTC +
Preference number: 5 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGARGTH*CGFVPL
Trigger: GAGTGGCACAAAACCACACAAATGAGTGCCGCGGGC...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTGCCCGCGGCACTCATTaGTGTGGTTTTGTGCCACTC +
Preference number: 5 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGAARGTH*CGFVPL
Trigger: GAGTGGCACAAAACCACACAAATGAGTGCCGCGGGC...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCAGTAGTTCCTTTTCCTaGGCTCGCAGCTCGTCGAAG +
Preference number: 5 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLSSSFS*ARSSSK
Trigger: CTTCGACGAGCTGCGAGCCAAGGAAAAGGAACTACT...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGCCCGCTGGATCAGCTaGGGCGTCCCAGAGCTGCTA +
Preference number: 5 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAARWIS*GVPELL
Trigger: TAGCAGCTCTGGGACGCCCAAGCTGATCCAGCGGGC...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS TCA 90 bp GCACCAGGAAACCCTCTGAAGCTGTCACTCACTTCTCTTGGGCCATaGTGGGCAGCGTGTCGGGGGCTTGAAATGATGGGAGATGGAGTC +
Preference number: 5 (lower is better)
Translates to: APGNPLKLSLTSLGP*WAACRGLEMMGDGV
Trigger: GACTCCATCTCCCATCATTTCAAGCCCCCGACACGCTGCCCATCATGGCCCAAGAGAAGTGAGTGACAGCTTCAGAGGGTTTCCTGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 90 bp AATGTCTCATGCTTTTCCAGTGACCACACTGAGCCTGGCCCCTCCTaGATTTCCTACTGCTGCTCTCCAGCCTGCACTCTGGGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: NVSCFSSDHTEPGPS*ISYCCSPACTLGSR
Trigger: CCTAGAGCCCAGAGTGCAGGCTGGAGAGCAGCAGTAGGAAATGCAGGAGGGGCCAGGCTCAGTGTGGTCACTGGAAAAGCATGAGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 90 bp CCCTTACTGCCACTTCACCCAAAAGCAACTAGGAGCCAAGTGGTTTaGGTCCCTGTCCCTGGACTTGGCCCAGCCCTAGATTTAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PLLPLHPKATRSQVV*VPVPGLGPALDLGS
Trigger: GCTGCCTAAATCTAGGGCTGGGCCAAGTCCAGGGACAGGGACCCAAACCACTTGGCTCCTAGTTGCTTTTGGGTGAAGTGGCAGTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS-3UTR CAA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTCTCATTTGTGTGGTTTaGTGCCACTCTCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGALICVV*CHSRAR
Trigger: CCTGGCCCGAGAGTGGCACAAAACCACACAAATGAG...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGGAGTCGGGCGTCTaGAGCGAGAAGCAGATGAGC +
Preference number: 5 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAGESGV*SEKQMS
Trigger: GCTCATCTGCTTCTCGCTCAAGACGCCCGACTCCCC...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS TCA 90 bp CTCTGTGCTTTCAACTGTCCCAACTCGAACTGCTGTTCTGGTGTCTaGTGTAGATCCCAGGCATGGGAGGTCAGGGGTCACCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LCAFNCPNSNCCSGV*CRSQAWEVRGHPEE
Trigger: CTCCTCTGGGTGACCCCTGACCTCCCATGCCTGGGATCTACATCAGACACCAGAACAGCAGTTCGAGTTGGGACAGTTGAAAGCACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527304.1
ENST00000530153.5
CDS GCA 90 bp GTGTGCTGGGTCCTGCTTCCATGCCTTCTCTCTCTAAATGCTGCGTaGACCAGGAAACCCTCTGAAGCTGTCACTCACTTCTCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: VCWVLLPCLLSLNAA*TRKPSEAVTHFSWA
Trigger: GGCCCAAGAGAAGTGAGTGACAGCTTCAGAGGGTTTCCTGGTGCACGCAGCATTTAGAGAGAGAAGGCATGGAAGCAGGACCCAGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 90 bp CTAGTTGGATGGGGTGGGGAAGACTGGAGGACAGACGGAACTGGCTaGACCTCAAGCTCTTGGAGTGGATTGCCTAAGGCTCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LVGWGGEDWRTDGTG*TSSSWSGLPKALFF
Trigger: GAAGAAGAGAGCCTTAGGCAATCCACTCCAAGAGCTTGAGGTGCAGCCAGTTCCGTCTGTCCTCCAGTCTTCCCCACCCCATCCAACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS CCA 90 bp ATGAGGAGCACGAGCTTCCAGAGGACTTCCTTGAGGTGGGAGCCATaGCTGGGCAGGATGCTTATGGCCCACCTGAGAGATACCAATTTC +
Preference number: 5 (lower is better)
Translates to: MRSTSFQRTSLRWEP*LGRMLMAHLRDTNF
Trigger: GAAATTGGTATCTCTCAGGTGGGCCATAAGCATCCTGCCCAGCCATGGCTCCCACCTCAAGGAAGTCCTCTGGAAGCTCGTGCTCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 90 bp GGGGAAGACTGGAGGACAGACGGAACTGGCTGCACCTCAAGCTCTTaGAGTGGATTGCCTAAGGCTCTCTTCTTCTCCTCACCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: GEDWRTDGTGCTSSS*SGLPKALFFSSPGK
Trigger: TTTCCCAGGTGAGGAGAAGAAGAGAGCCTTAGGCAATCCACTCCAAGAGCTTGAGGTGCAGCCAGTTCCGTCTGTCCTCCAGTCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS CCA 90 bp GATGGCTGTGAGACTGTGACCAGCCTCACTGCTTTCTTGAGCCCCTaGGTCTGGATAAGGAAAGCTACTCGTCTGAGTCGGAGATGCCCT +
Preference number: 5 (lower is better)
Translates to: DGCETVTSLTAFLSP*VWIRKATRLSRRCP
Trigger: AGGGCATCTCCGACTCAGACGAGTAGCTTTCCTTATCCAGACCCAGGGGCTCAAGAAAGCAGTGAGGCTGGTCACAGTCTCACAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS-3UTR CAA 90 bp AGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGTGCAGCAGCAAAATGTaGTTGGACTTGAGATCACGG +
Preference number: 5 (lower is better)
Translates to: SRTWSKVLVTAEAGPSSLCSSKM*LDLRSR
Trigger: CCGTGATCTCAAGTCCAACAACATTTTGCTGCTGCA...CAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CAA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTTGGGCACCCATGTCTTaGGTCTGTGCCCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAWAPMS*VCALQS
Trigger: GGACTGCAGGGCACAGACCAAAGACATGGGTGCCCA...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
ENST00000532507.5
CDS GCA 90 bp GCCCACCTGAGAGATACCAATTTCTTAACTTGTCCAAACCGCAGCTaGAGGCTGGGGTCAAGGACTTCTGAAGCTGGCGCAGGAAGACTC +
Preference number: 5 (lower is better)
Translates to: AHLRDTNFLTCPNRS*RLGSRTSEAGAGRL
Trigger: GAGTCTTCCTGCGCCAGCTTCAGAAGTCCTTGACCCCAGCCTGCAGCTGCGGTTTGGACAAGTTAAGAAATTGGTATCTCTCAGGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS-3UTR CAA 90 bp ACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCGGCCCCTCTTCCCTGCACCTCAAAATGTTGTTGGACTaGAGATCACGGTGGATGACG +
Preference number: 5 (lower is better)
Translates to: TWSKVLVTAEAGPSSLHLKMLLD*RSRWMT
Trigger: CGTCATCCACCGTGATCTCAAGTCCAACAACATTTT...GAGGTGCAGGGAAGAGGGGCCGGCCTCAGCTGTCACCAGCACTTTTGACCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CAA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGCCCGCGGCACTCATTaGTGTGGTTTTGTGCCACTC +
Preference number: 5 (lower is better)
Translates to: FIWLLASLDPEAKTPTLAARGTH*CGFVPL
Trigger: GAGTGGCACAAAACCACACAAATGAGTGCCGCGGGC...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000530153.5
CDS-3UTR CAA 90 bp GGCAGGGGCCGCAGTAGCAGGACTTGGTCAAAAGTGCTGGTGACAGCTGAGGCCAGTTTCAGGACTTCTTaGTACTTGTGGTCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: GRGRSSRTWSKVLVTAEASFRTS*YLWSFC
Trigger: GCAGAAAGACCACAAGTACAAAGAAGTCCTGAAACT...GGCCTCAGCTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS TCA 90 bp ACCCGCTGTGGGTTGGGGATCGCAGGTCGGGCTTGCCCAAGCTGTTaGGCTGTTTCACTCTCCCTTTTTACAGATTCTGAAATTGAGGCT +
Preference number: 5 (lower is better)
Translates to: TRCGLGIAGRACPSC*AVSLSLFTDSEIEA
Trigger: AGCCTCAATTTCAGAATCTGTAAAAAGGGAGAGTGAAACAGCTCAACAGCTTGGGCAAGCCCGACCTGCGATCCCCAACCCACAGCGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 90 bp AGCAGGTACCACAGGCCCCTAGTGCCCACATCACACTGTGGCAAGTaGAGCCACTCCCAAAGCAAAGACTCCAAAAGATACCTACCAATG +
Preference number: 5 (lower is better)
Translates to: SRYHRPLVPTSHCGK*SHSQSKDSKRYLPM
Trigger: CATTGGTAGGTATCTTTTGGAGTCTTTGCTTTGGGAGTGGCTGCACTTGCCACAGTGTGATGTGGGCACTAGGGGCCTGTGGTACCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 90 bp GTGATCTTCAGGGTCTTGTGCTCCATGTCGTCACTCTCAATGGGCTaGAGCAGCAAAACTAGAGAAGAGGGGCCAGATTGTGGATGCTCC +
Preference number: 5 (lower is better)
Translates to: VIFRVLCSMSSLSMG*SSKTREEGPDCGCS
Trigger: GGAGCATCCACAATCTGGCCCCTCTTCTCTAGTTTTGCTGCTGCAGCCCATTGAGAGTGACGACATGGAGCACAAGACCCTGAAGATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534110.1
CDS CCA 90 bp TTTGGGCAAGATAGATGGGTTTGGGTCTTGGGGCCAACAGTGGGGTaGGGCATCTCATCTAGCCCTTGGGCTGAAGTTTGCTGCTTAGTA +
Preference number: 5 (lower is better)
Translates to: FGQDRWVWVLGPTVG*GISSSPWAEVCCLV
Trigger: TACTAAGCAGCAAACTTCAGCCCAAGGGCTAGATGAGATGCCCCACCCCACTGTTGGCCCCAAGACCCAAACCCATCTATCTTGCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526647.1
CDS-3UTR CAA 90 bp ATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTGGGAGCAGCAAAATGTTGTaGGACTTGAGATCACGGTGG +
Preference number: 5 (lower is better)
Translates to: IWLLASLDPEAKTPTLAGSSKML*DLRSRW
Trigger: CCACCGTGATCTCAAGTCCAACAACATTTTGCTGCT...CCCAGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309100.8
CDS-3UTR CAA 90 bp TTTATTTGGCTTCTGGCTTCACTGGATCCCGAGGCTAAGACTCCAACCCTGGCTAGCCTCACTGCTTTCTaGAGCCCCTGGGTCTGGATA +
Preference number: 5 (lower is better)
Translates to: FIWLLASLDPEAKTPTLASLTAF*SPWVWI
Trigger: TATCCAGACCCAGGGGCTCAAGAAAGCAGTGAGGCT...AGCCAGGGTTGGAGTCTTAGCCTCGGGATCCAGTGAAGCCAGAAGCCAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS TCA 90 bp ACATTTGCAACTCCAGGCCAGACAAATTGGTTCAGCAGCTCTACCTaGTGTCCAGGTGCCCTCCATGACCACCTTTACTATCCCGGCATG +
Preference number: 5 (lower is better)
Translates to: TFATPGQTNWFSSST*CPGALHDHLYYPGM
Trigger: CATGCCGGGATAGTAAAGGTGGTCATGGAGGGCACCTGGACATCAGGTAGAGCTGCTGAACCAATTTGTCTGGCCTGGAGTTGCAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS-3UTR CAA 90 bp GACCCAGCTCCTGTTCCAGTGTATGCTGTGACTCCTCCTAAGGCAGCTGGAGCTAGGACTTCTTTGTACTaGTGGTCTTTCTGCTACCTC +
Preference number: 5 (lower is better)
Translates to: DPAPVPVYAVTPPKAAGARTSLY*WSFCYL
Trigger: GAGGTAGCAGAAAGACCACAAGTACAAAGAAGTCCT...AGCTCCAGCTGCCTTAGGAGGAGTCACAGCATACACTGGAACAGGAGCTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS GCA 90 bp CCAACAGTGGGGTGGGGCATCTCATCTAGCCCTTGGGCTGAAGTTTaGTGCTTAGTAATTAGTACAGACACTGACACCAACTGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: PTVGWGISSSPWAEV*CLVISTDTDTNCLS
Trigger: ACTCAGGCAGTTGGTGTCAGTGTCTGTACTAATTACTAAGCAGCAAACTTCAGCCCAAGGGCTAGATGAGATGCCCCACCCCACTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526647.1
CDS GCA 90 bp ACAGTGGGGTGGGGCATCTCATCTAGCCCTTGGGCTGAAGTTTGCTaGTTAGTAATTAGTACAGACACTGACACCAACTGCCTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: TVGWGISSSPWAEVC*LVISTDTDTNCLSL
Trigger: CAAACTCAGGCAGTTGGTGTCAGTGTCTGTACTAATTACTAAGCAGCAAACTTCAGCCCAAGGGCTAGATGAGATGCCCCACCCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526647.1
CDS CCA 90 bp GTTTCACTCTCCCTTTTTACAGATTCTGAAATTGAGGCTCCGAGTTaGAGTAACCAGCTAGAGGTCATGAAGCCAGGGAGGGCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: VSLSLFTDSEIEAPS*SNQLEVMKPGRARP
Trigger: TGGCCTAGCCCTCCCTGGCTTCATGACCTCTAGCTGGTTACTCCAACTCGGAGCCTCAATTTCAGAATCTGTAAAAAGGGAGAGTGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 90 bp CTCCTCACCTGGGAAACAATCCGCTTCTTCATATCCCTTCCCCATTaGCAGAAACCTGAGACTTGTCCAGAACTTTGCCCAGGATTGGAT +
Preference number: 5 (lower is better)
Translates to: LLTWETIRFFISLPH*QKPETCPELCPGLD
Trigger: ATCCAATCCTGGGCAAAGTTCTGGACAAGTCTCAGGTTTCTGCCAATGGGGAAGGGATATGAAGAAGCGGATTGTTTCCCAGGTGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS TCA 90 bp CTGAGTCGCCCTCACAACTTCTGGATAGGGCTGCCCCAATTGCTTTaGGCCTGTCACTTTAAGAAAGACGACGCTATCCTATTTCGACTA +
Preference number: 5 (lower is better)
Translates to: LSRPHNFWIGLPQLL*ACHFKKDDAILFRL
Trigger: TAGTCGAAATAGGATAGCGTCGTCTTTCTTAAAGTGACAGGCTCAAAGCAATTGGGGCAGCCCTATCCAGAAGTTGTGAGGGCGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS GCA 90 bp CCTGATGTCCAGGTGCCCTCCATGACCACCTTTACTATCCCGGCATaGCCAGTAGATTTTCCTGCAATTTTTCCTAATCCAGAGAATGGT +
Preference number: 5 (lower is better)
Translates to: PDVQVPSMTTFTIPA*PVDFPAIFPNPENG
Trigger: ACCATTCTCTGGATTAGGAAAAATTGCAGGAAAATCTACTGGGCATGCCGGGATAGTAAAGGTGGTCATGGAGGGCACCTGGACATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 90 bp CAAATGGGGCCACCGTACTTGGTACAAAGAGGAGAAGCAGCAACTTaGATATCTCTCACCAGGACAGGAATGGCTCAAATGAGAGAAGTT +
Preference number: 5 (lower is better)
Translates to: QMGPPYLVQRGEAAT*ISLTRTGMAQMREV
Trigger: AACTTCTCTCATTTGAGCCATTCCTGTCCTGGTGAGAGATATGCAAGTTGCTGCTTCTCCTCTTTGTACCAAGTACGGTGGCCCCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS TCA 90 bp GGAAACAATCCGCTTCTTCATATCCCTTCCCCATTGGCAGAAACCTaGGACTTGTCCAGAACTTTGCCCAGGATTGGATTCAGAATAGCT +
Preference number: 5 (lower is better)
Translates to: GNNPLLHIPSPLAET*DLSRTLPRIGFRIA
Trigger: AGCTATTCTGAATCCAATCCTGGGCAAAGTTCTGGACAAGTCTCAGGTTTCTGCCAATGGGGAAGGGATATGAAGAAGCGGATTGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS GCA 90 bp ATGAAGGGTCTGAAGGGCCCCTCTACTTTTCAGGTTACAGCCAACTaGACTGTGGAAGAGAAGCAATATCAAGTCAACCATGTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: MKGLKGPSTFQVTAN*TVEEKQYQVNHVSG
Trigger: TCCAGAAACATGGTTGACTTGATATTGCTTCTCTTCCACAGTGCAGTTGGCTGTAACCTGAAAAGTAGAGGGGCCCTTCAGACCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 90 bp CCTGTCACTTTAAGAAAGACGACGCTATCCTATTTCGACTATTCCTaGCTGTTACGGAAGGTTGTTCTCTACACCCTAGGTCTGAGCTCT +
Preference number: 5 (lower is better)
Translates to: PVTLRKTTLSYFDYS*LLRKVVLYTLGLSS
Trigger: AGAGCTCAGACCTAGGGTGTAGAGAACAACCTTCCGTAACAGGCAGGAATAGTCGAAATAGGATAGCGTCGTCTTTCTTAAAGTGACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS CAA 72 bp CGCTCGCCGCCGTCGCGCGCCCGGAGCTTGCTGCGCTaGAATGTCCCGCGGCGGCGGCGCACGTGCGGTCGC +
Preference number: 6 (lower is better)
Translates to: RSPPSRARSLLR*NVPRRRRTCGR
Trigger: GCGACCGCACGTGCGCCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCCGGGCGCGCGACGGCGGCGAGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000524856.1
ENST00000530153.5
ENST00000533032.1
CDS TCA 72 bp GCTCGCCGCCGTCGCGCGCCCGGAGCTTGCTGCGCTTaGATGTCCCGCGGCGGCGGCGCACGTGCGGTCGCT +
Preference number: 6 (lower is better)
Translates to: ARRRRAPGACCA*MSRGGGARAVA
Trigger: AGCGACCGCACGTGCGCCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCCGGGCGCGCGACGGCGGCGAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000524856.1
ENST00000530153.5
ENST00000533032.1
CDS TCA 72 bp GACGCCCCGGGGCCCGGCCCTCACCGAGTGGCATGCTaGTACGCTCGCCGCCGTCGCGCGCCCGGAGCTTGC +
Preference number: 6 (lower is better)
Translates to: DAPGPGPHRVAC*YARRRRAPGAC
Trigger: GCAAGCTCCGGGCGCGCGACGGCGGCGAGCGTATCAGCATGCCACTCGGTGAGGGCCGGGCCCCGGGGCGTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533032.1
CDS CAA 90 bp ATGCTGATACGCTCGCCGCCGTCGCGCGCCCGGAGCTTGCTGCGCTaGAATGTCCCGCGGCGGCGGCGCACGTGCGGTCGCTCGCGGTCC +
Preference number: 6 (lower is better)
Translates to: MLIRSPPSRARSLLR*NVPRRRRTCGRSRS
Trigger: GGACCGCGAGCGACCGCACGTGCGCCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCCGGGCGCGCGACGGCGGCGAGCGTATCAGCAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000524856.1
ENST00000530153.5
ENST00000533032.1
CDS CAA 90 bp CCGAGTGGCATGCTGATACGCTCGCCGCCGTCGCGCGCCCGGAGCTaGCTGCGCTTGAATGTCCCGCGGCGGCGGCGCACGTGCGGTCGC +
Preference number: 6 (lower is better)
Translates to: PSGMLIRSPPSRARS*LRLNVPRRRRTCGR
Trigger: GCGACCGCACGTGCGCCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCCGGGCGCGCGACGGCGGCGAGCGTATCAGCATGCCACTCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533032.1
CDS CAA 72 bp ATGCTGATACGCTCGCCGCCGTCGCGCGCCCGGAGCTaGCTGCGCTTGAATGTCCCGCGGCGGCGGCGCACG +
Preference number: 6 (lower is better)
Translates to: MLIRSPPSRARS*LRLNVPRRRRT
Trigger: CGTGCGCCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCCGGGCGCGCGACGGCGGCGAGCGTATCAGCAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000524856.1
ENST00000530153.5
ENST00000533032.1
CDS CAA 90 bp TCGAGTGGCATGCTGATACGCTCGCCGCCGTCGCGCGCCCGGAGCTaGCTGCGCTTGAATGTCCCGCGGCGGCGGCGCACGTGCGGTCGC +
Preference number: 6 (lower is better)
Translates to: SSGMLIRSPPSRARS*LRLNVPRRRRTCGR
Trigger: GCGACCGCACGTGCGCCGCCGCCGCGGGACATTCAAGCGCAGCAAGCTCCGGGCGCGCGACGGCGGCGAGCGTATCAGCATGCCACTCGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000524856.1
ENST00000530153.5
CDS GCA 72 bp CGGCGGCGCACGTGCGGTCGCTCGCGGTCCACCTGCTaGAGCAGCAGCGTCAGCTCGCGCTCGAACACCTCT +
Preference number: 6 (lower is better)
Translates to: RRRTCGRSRSTC*SSSVSSRSNTS
Trigger: AGAGGTGTTCGAGCGCGAGCTGACGCTGCTGCTGCAGCAGGTGGACCGCGAGCGACCGCACGTGCGCCGCCG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000524856.1
ENST00000530153.5
ENST00000533032.1
CDS CCA 72 bp GGGAGCGTCCGCAGTTGGGCCGAGACTGCCTGTTCCTaGCCCCGTCTCCTTTGGCCCCGACGGCTCCGACCC +
Preference number: 6 (lower is better)
Translates to: GSVRSWAETACS*PRLLWPRRLRP
Trigger: GGGTCGGAGCCGTCGGGGCCAAAGGAGACGGGGCCAGGAACAGGCAGTCTCGGCCCAACTGCGGACGCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000524856.1
ENST00000526293.1
ENST00000527304.1
ENST00000529839.1
CDS CAA 72 bp GGGCCCCGGGGCCTCCGGCGCCTCACCATGGCTAGCTaGGAGGGACCCGAGCTTCCCTCGGTTCTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: GPRGLRRLTMAS*EGPELPSVLEQ
Trigger: CTGCTCCAGAACCGAGGGAAGCTCGGGTCCCTCCAAGCTAGCCATGGTGAGGCGCCGGAGGCCCCGGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000527304.1
CDS CCA 72 bp CTGGGAGCCTGGCTCCGGCCCCCGCCAAGTGTAAGGTaGGGCCTTCAGGGGCAGCGCCTCAACTCCGGTTGG +
Preference number: 6 (lower is better)
Translates to: LGAWLRPPPSVR*GLQGQRLNSGW
Trigger: CCAACCGGAGTTGAGGCGCTGCCCCTGAAGGCCCCACCTTACACTTGGCGGGGGCCGGAGCCAGGCTCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000526293.1
ENST00000527304.1
ENST00000529839.1
CDS CCA 72 bp GGCCCCGGGGCCTCCGGCGCCTCACCATGGCTAGCTTaGAGGGACCCGAGCTTCCCTCGGTTCTGGAGCAGT +
Preference number: 6 (lower is better)
Translates to: GPGASGASPWLA*RDPSFPRFWSS
Trigger: ACTGCTCCAGAACCGAGGGAAGCTCGGGTCCCTCCAAGCTAGCCATGGTGAGGCGCCGGAGGCCCCGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000527304.1
CDS CAA 90 bp GGTGAGACAGTGCCTCCGCGGGGCTCCTCCTCACGTCGGGGGCTCTaGGCTGACCGCTGGCCCACAGGGATACCCAGGTCCAGCAACAGG +
Preference number: 6 (lower is better)
Translates to: GETVPPRGSSSRRGL*ADRWPTGIPRSSNR
Trigger: CCTGTTGCTGGACCTGGGTATCCCTGTGGGCCAGCGGTCAGCCAAGAGCCCCCGACGTGAGGAGGAGCCCCGCGGAGGCACTGTCTCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000530153.5
ENST00000532507.5
CDS GCA 72 bp AGGATGGAGGCGAAGTCGGGCCTGCGGTGGGGGTCCTaGGCCCAGCAGTCGGCCATAAGCTGTGCGAAGGGC +
Preference number: 6 (lower is better)
Translates to: RMEAKSGLRWGS*AQQSAISCAKG
Trigger: GCCCTTCGCACAGCTTATGGCCGACTGCTGGGCGCAGGACCCCCACCGCAGGCCCGACTTCGCCTCCATCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000530153.5
CDS GCA 72 bp TCCCGTAGGACCTGTGCCTCCAGCGCCTCCAACTGCTaGAGGATGGAGGCGAAGTCGGGCCTGCGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: SRRTCASSASNC*RMEAKSGLRWG
Trigger: CCCCCACCGCAGGCCCGACTTCGCCTCCATCCTGCAGCAGTTGGAGGCGCTGGAGGCACAGGTCCTACGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000530153.5
ENST00000530949.1
ENST00000533032.1
CDS CCA 72 bp AGGCTCTTCAAGGGCTCCATGGCCGGGAGCCGGCGCTaGGATGTGTGGAGGACCTTCTCTGGGTGCCCGTGG +
Preference number: 6 (lower is better)
Translates to: RLFKGSMAGSRR*DVWRTFSGCPW
Trigger: CCACGGGCACCCAGAGAAGGTCCTCCACACATCCCAGCGCCGGCTCCCGGCCATGGAGCCCTTGAAGAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000527304.1
CDS CCA 72 bp CGCCTCAACTCCGGTTGGGTCTTTTTGCGCAGGGGGTaGAGGGAGCGTCCGCAGTTGGGCCGAGACTGCCTG +
Preference number: 6 (lower is better)
Translates to: RLNSGWVFLRRG*RERPQLGRDCL
Trigger: CAGGCAGTCTCGGCCCAACTGCGGACGCTCCCTCCACCCCCTGCGCAAAAAGACCCAACCGGAGTTGAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000526293.1
ENST00000527304.1
ENST00000529839.1
CDS GCA 72 bp ATTTCCCGTAGGACCTGTGCCTCCAGCGCCTCCAACTaGTGCAGGATGGAGGCGAAGTCGGGCCTGCGGTGG +
Preference number: 6 (lower is better)
Translates to: ISRRTCASSASN*CRMEAKSGLRW
Trigger: CCACCGCAGGCCCGACTTCGCCTCCATCCTGCAGCAGTTGGAGGCGCTGGAGGCACAGGTCCTACGGGAAAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000530153.5
ENST00000530949.1
ENST00000533032.1
CDS GCA 72 bp CCACCAGCTCACCTCGCCAGCTGCCCCTGTACACCTTaGCAAAGCCTCCAATGCCGATCACCTCCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: PPAHLASCPCTP*QSLQCRSPPPA
Trigger: GGCTGGAGGAGGTGATCGGCATTGGAGGCTTTGGCAAGGTGTACAGGGGCAGCTGGCGAGGTGAGCTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000527304.1
CDS GCA 72 bp TGGGCCAGAGACCCCGAAACTGGGGGAAGCTCTCAGTaGCCCTTTAGGGCTCCCTGGCCTCTGATAGGGACC +
Preference number: 6 (lower is better)
Translates to: WARDPETGGSSQ*PFRAPWPLIGT
Trigger: GGTCCCTATCAGAGGCCAGGGAGCCCTAAAGGGGCACTGAGAGCTTCCCCCAGTTTCGGGGTCTCTGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527304.1
ENST00000530153.5
CDS GCA 72 bp GGATGTGTCCTGGGCCAGGGAGCTCTGTACCTCACCTaGCCTCCCCGTCCTCTTACCGGCCATAAGCTGTGC +
Preference number: 6 (lower is better)
Translates to: GCVLGQGALYLT*PPRPLTGHKLC
Trigger: GCACAGCTTATGGCCGGTAAGAGGACGGGGAGGGCAGGTGAGGTACAGAGCTCCCTGGCCCAGGACACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524856.1
ENST00000530949.1
CDS CCA 72 bp CACGGCTGTCATGGGGGCAGCATAGGGCACAGGGGGTaGGGCAGATGGGAAGGGCACCTAATACAGCCTGGT +
Preference number: 6 (lower is better)
Translates to: HGCHGGSIGHRG*GRWEGHLIQPG
Trigger: ACCAGGCTGTATTAGGTGCCCTTCCCATCTGCCCCACCCCCTGTGCCCTATGCTGCCCCCATGACAGCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 72 bp ACGGCGTGCAGCGGGGACAGAATAAGAAGGGGTCCGTaGGTGGATGTGTCCTGGGCCAGGGAGCTCTGTACC +
Preference number: 6 (lower is better)
Translates to: TACSGDRIRRGP*VDVSWARELCT
Trigger: GGTACAGAGCTCCCTGGCCCAGGACACATCCACCCACGGACCCCTTCTTATTCTGTCCCCGCTGCACGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524856.1
ENST00000530949.1
CDS CAA 72 bp GCCACCAGCTCACCTCGCCAGCTGCCCCTGTACACCTaGCCAAAGCCTCCAATGCCGATCACCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: ATSSPRQLPLYT*PKPPMPITSSS
Trigger: GCTGGAGGAGGTGATCGGCATTGGAGGCTTTGGCAAGGTGTACAGGGGCAGCTGGCGAGGTGAGCTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000527304.1
CDS TCA 72 bp GACCTCGAAGACGTTTCTCCTCCGGTCAAGGCCGGGTaGGGCCTGCACGGTGATGCGGTGCTTGAAGTCGAG +
Preference number: 6 (lower is better)
Translates to: DLEDVSPPVKAG*GLHGDAVLEVE
Trigger: CTCGACTTCAAGCACCGCATCACCGTGCAGGCCTCACCCGGCCTTGACCGGAGGAGAAACGTCTTCGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000524856.1
ENST00000530153.5
CDS TCA 72 bp TCCAAACCGCAGCTGCAGGCTGGGGTCAAGGACTTCTaGAGCTGGCGCAGGAAGACTCTGCTGGGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: SKPQLQAGVKDF*SWRRKTLLGAW
Trigger: CCAGGCACCCAGCAGAGTCTTCCTGCGCCAGCTTCAGAAGTCCTTGACCCCAGCCTGCAGCTGCGGTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS TCA 72 bp GGTGGGGACAGGGTAAGAGCTGGGAGCAAACTCATCTaGCGGACATCCTGGCTGGGTCCTGGGGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: GGDRVRAGSKLI*RTSWLGPGGTE
Trigger: CTCTGTGCCCCCAGGACCCAGCCAGGATGTCCGTCAGATGAGTTTGCTCCCAGCTCTTACCCTGTCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534110.1
CDS TCA 72 bp GACCTCGAAGACGTTTCTCCTCCGGTCAAGGCCGGGTaGGGCCTGCACGGTGATGCGGTGCTTGAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: DLEDVSPPVKAG*GLHGDAVLEVW
Trigger: CCAGACTTCAAGCACCGCATCACCGTGCAGGCCTCACCCGGCCTTGACCGGAGGAGAAACGTCTTCGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS GCA 72 bp GGCAGTGGGTGGAGTGGAAATGGGCACCTCCCCTGGTaGCAGGGCCCACCTTCCCCTTTGAAGACCAACACT +
Preference number: 6 (lower is better)
Translates to: GSGWSGNGHLPW*QGPPSPLKTNT
Trigger: AGTGTTGGTCTTCAAAGGGGAAGGTGGGCCCTGGCACCAGGGGAGGTGCCCATTTCCACTCCACCCACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 72 bp GGTGGAGGTTGGTCTCTGCTAAGGATGGGCCATCTCTaGCCTCTGCATCCGCATCGGCGGCAGCAAAACGGG +
Preference number: 6 (lower is better)
Translates to: GGGWSLLRMGHL*PLHPHRRQQNG
Trigger: CCCGTTTTGCTGCCGCCGATGCGGATGCAGAGGGCAGAGATGGCCCATCCTTAGCAGAGACCAACCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS CCA 72 bp CCTCAAATGTCCATCTCCATGGCTGAGGACCCGCTGTaGGTTGGGGATCGCAGGTCGGGCTTGCCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: PQMSISMAEDPL*VGDRRSGLPKL
Trigger: CAGCTTGGGCAAGCCCGACCTGCGATCCCCAACCCACAGCGGGTCCTCAGCCATGGAGATGGACATTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 72 bp GACAGAATAAGAAGGGGTCCGTGGGTGGATGTGTCCTaGGCCAGGGAGCTCTGTACCTCACCTGCCCTCCCC +
Preference number: 6 (lower is better)
Translates to: DRIRRGPWVDVS*ARELCTSPALP
Trigger: GGGGAGGGCAGGTGAGGTACAGAGCTCCCTGGCCCAGGACACATCCACCCACGGACCCCTTCTTATTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524856.1
ENST00000530949.1
CDS CAA 72 bp CCGCTGCCACTGCCATTCCATGACCCTAGAGGGCTCTaGAGGAAGAGGCTCTTCAAGGGCTCCATGGCCGGG +
Preference number: 6 (lower is better)
Translates to: PLPLPFHDPRGL*RKRLFKGSMAG
Trigger: CCCGGCCATGGAGCCCTTGAAGAGCCTCTTCCTCAAGAGCCCTCTAGGGTCATGGAATGGCAGTGGCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000527304.1
CDS CAA 72 bp AGCCAGATCCTGCCGGGGGAGGAAGGCCACTCACCATaGAGTGCTGGGGGTGTGGAAGGAGATCCTAAGGGG +
Preference number: 6 (lower is better)
Translates to: SQILPGEEGHSP*SAGGVEGDPKG
Trigger: CCCCTTAGGATCTCCTTCCACACCCCCAGCACTCAATGGTGAGTGGCCTTCCTCCCCCGGCAGGATCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526647.1
CDS GCA 72 bp AAGACGTTTCTCCTCCGGTCAAGGCCGGGTGAGGCCTaGACGGTGATGCGGTGCTTGAAGTCGAGTGGCATG +
Preference number: 6 (lower is better)
Translates to: KTFLLRSRPGEA*TVMRCLKSSGM
Trigger: CATGCCACTCGACTTCAAGCACCGCATCACCGTGCAGGCCTCACCCGGCCTTGACCGGAGGAGAAACGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524848.5
ENST00000524856.1
ENST00000530153.5
CDS CAA 90 bp GAAAGAAAAGCCCCCAGCTGCGTGCTCTGCTGCCTAGGGTGGAGGTaGGTCTCTGCTAAGGATGGGCCATCTCTGCCCTCTGCATCCGCA +
Preference number: 6 (lower is better)
Translates to: ERKAPSCVLCCLGWR*VSAKDGPSLPSASA
Trigger: TGCGGATGCAGAGGGCAGAGATGGCCCATCCTTAGCAGAGACCAACCTCCACCCTAGGCAGCAGAGCACGCAGCTGGGGGCTTTTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS TCA 72 bp GAGTCTCCCTTAGCCCAGCACTCCCATCCCAAGCACTaGTTTCAGGCTAGGCCCTCTTGGCGATCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: ESPLAQHSHPKH*FQARPSWRSSP
Trigger: AGGGCTGGATCGCCAAGAGGGCCTAGCCTGAAATCAGTGCTTGGGATGGGAGTGCTGGGCTAAGGGAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 72 bp CTTGTGGTCTTTCTGCTACCTCCCCGCTCCTGGCTCTaGCAGCTGCTAAGCCCCATCCTCTGCTTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: LVVFLLPPRSWL*QLLSPILCFLS
Trigger: GGAGAGAAAGCAGAGGATGGGGCTTAGCAGCTGGCAGAGCCAGGAGCGGGGAGGTAGCAGAAAGACCACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527304.1
ENST00000530153.5
CDS GCA 72 bp AAGACGTTTCTCCTCCGGTCAAGGCCGGGTGAGGCCTaGACGGTGATGCGGTGCTTGAAGTCTGGGATTTGG +
Preference number: 6 (lower is better)
Translates to: KTFLLRSRPGEA*TVMRCLKSGIW
Trigger: CCAAATCCCAGACTTCAAGCACCGCATCACCGTGCAGGCCTCACCCGGCCTTGACCGGAGGAGAAACGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS CCA 72 bp TCCTTTTCCTTGGCTCGCAGCTCGTCGAAGAGACCCTaGATCTCGCGCTTCCAGCCTTCCGGCCATAAGCTG +
Preference number: 6 (lower is better)
Translates to: SFSLARSSSKRP*ISRFQPSGHKL
Trigger: CAGCTTATGGCCGGAAGGCTGGAAGCGCGAGATCCAGGGTCTCTTCGACGAGCTGCGAGCCAAGGAAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524848.5
CDS CCA 72 bp GTTTCTTACACTGGATGGCTCGGAACCGGGGAAAGGTaGGCGAATCCCCAGGCCCGACCTCGAAGACGTTTC +
Preference number: 6 (lower is better)
Translates to: VSYTGWLGTGER*ANPQARPRRRF
Trigger: GAAACGTCTTCGAGGTCGGGCCTGGGGATTCGCCCACCTTTCCCCGGTTCCGAGCCATCCAGTGTAAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS CAA 72 bp GAGGACCCGCTGTGGGTTGGGGATCGCAGGTCGGGCTaGCCCAAGCTGTTGAGCTGTTTCACTCTCCCTTTT +
Preference number: 6 (lower is better)
Translates to: EDPLWVGDRRSG*PKLLSCFTLPF
Trigger: AAAAGGGAGAGTGAAACAGCTCAACAGCTTGGGCAAGCCCGACCTGCGATCCCCAACCCACAGCGGGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CAA 90 bp GAGCGGCACGATGGCTGTGAGACTGTGACCAGCCTCACTGCTTTCTaGAGCCCCTGGGTCTGGATAAGGAAAGCTACTCGTCTGAGTCGG +
Preference number: 6 (lower is better)
Translates to: ERHDGCETVTSLTAF*SPWVWIRKATRLSR
Trigger: CCGACTCAGACGAGTAGCTTTCCTTATCCAGACCCAGGGGCTCAAGAAAGCAGTGAGGCTGGTCACAGTCTCACAGCCATCGTGCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS CCA 72 bp TCCTTTTCCTTGGCTCGCAGCTCGTCGAAGAGACCCTaGATCTCGCGCTTCCAGCCTTCCTGCATGGAATGG +
Preference number: 6 (lower is better)
Translates to: SFSLARSSSKRP*ISRFQPSCMEW
Trigger: CCATTCCATGCAGGAAGGCTGGAAGCGCGAGATCCAGGGTCTCTTCGACGAGCTGCGAGCCAAGGAAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309100.8
ENST00000524856.1
ENST00000530153.5
ENST00000533032.1
CDS CAA 90 bp TCCATGGCTGAGGACCCGCTGTGGGTTGGGGATCGCAGGTCGGGCTaGCCCAAGCTGTTGAGCTGTTTCACTCTCCCTTTTTACAGATTC +
Preference number: 6 (lower is better)
Translates to: SMAEDPLWVGDRRSG*PKLLSCFTLPFYRF
Trigger: GAATCTGTAAAAAGGGAGAGTGAAACAGCTCAACAGCTTGGGCAAGCCCGACCTGCGATCCCCAACCCACAGCGGGTCCTCAGCCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 72 bp TTCTGTGTCCTCCACCTTCAGCCATTTCGGCGCTGGTaGTTCTCAGAGCATGACCTCTCCTCAACCTCTGCC +
Preference number: 6 (lower is better)
Translates to: FCVLHLQPFRRW*FSEHDLSSTSA
Trigger: GGCAGAGGTTGAGGAGAGGTCATGCTCTGAGAAGCACCAGCGCCGAAATGGCTGAAGGTGGAGGACACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 72 bp GATCTAGAAAGAAAAGCCCCCAGCTGCGTGCTCTGCTaGCTAGGGTGGAGGTTGGTCTCTGCTAAGGATGGG +
Preference number: 6 (lower is better)
Translates to: DLERKAPSCVLC*LGWRLVSAKDG
Trigger: CCCATCCTTAGCAGAGACCAACCTCCACCCTAGGCAGCAGAGCACGCAGCTGGGGGCTTTTCTTTCTAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS CCA 72 bp GATAGATGGGTTTGGGTCTTGGGGCCAACAGTGGGGTaGGGCATCTCATCTAGCCCTTGGGCTGAAGTTTGC +
Preference number: 6 (lower is better)
Translates to: DRWVWVLGPTVG*GISSSPWAEVC
Trigger: GCAAACTTCAGCCCAAGGGCTAGATGAGATGCCCCACCCCACTGTTGGCCCCAAGACCCAAACCCATCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526647.1
CDS CCA 72 bp CCACTTCACCCAAAAGCAACTAGGAGCCAAGTGGTTTaGGTCCCTGTCCCTGGACTTGGCCCAGCCCTAGAT +
Preference number: 6 (lower is better)
Translates to: PLHPKATRSQVV*VPVPGLGPALD
Trigger: ATCTAGGGCTGGGCCAAGTCCAGGGACAGGGACCCAAACCACTTGGCTCCTAGTTGCTTTTGGGTGAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS CCA 72 bp GAAGAGGGGCCAGATTGTGGATGCTCCAGGATCAGGTaGTGGGGACAGGGTAAGAGCTGGGAGCAAACTCAT +
Preference number: 6 (lower is better)
Translates to: EEGPDCGCSRIR*WGQGKSWEQTH
Trigger: ATGAGTTTGCTCCCAGCTCTTACCCTGTCCCCACCACCTGATCCTGGAGCATCCACAATCTGGCCCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534110.1
CDS CAA 90 bp AGGCCCAGAGAGGGGCAACAACTCACCCAAAGTTTCAGGACTTCTTaGTACTTGTGGTCTTTCTGCTACCTCCCCGCTCCTGGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: RPREGQQLTQSFRTS*YLWSFCYLPAPGSA
Trigger: GGCAGAGCCAGGAGCGGGGAGGTAGCAGAAAGACCACAAGTACAAAGAAGTCCTGAAACTTTGGGTGAGTTGTTGCCCCTCTCTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS TCA 72 bp AACCCTCTGAAGCTGTCACTCACTTCTCTTGGGCCATaGTGGGCAGCGTGTCGGGGGCTTGAAATGATGGGA +
Preference number: 6 (lower is better)
Translates to: NPLKLSLTSLGP*WAACRGLEMMG
Trigger: TCCCATCATTTCAAGCCCCCGACACGCTGCCCATCATGGCCCAAGAGAAGTGAGTGACAGCTTCAGAGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 72 bp CTAGGCCAGAATTCCAGCCCTGGCCTTAGCCTTGACTaGCAAGGAGGGCTTCCCTCTCTGAGATATCTGTTC +
Preference number: 6 (lower is better)
Translates to: LGQNSSPGLSLD*QGGLPSLRYLF
Trigger: GAACAGATATCTCAGAGAGGGAAGCCCTCCTTGGCAGTCAAGGCTAAGGCCAGGGCTGGAATTCTGGCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 72 bp GAGACTGTGACCAGCCTCACTGCTTTCTTGAGCCCCTaGGTCTGGATAAGGAAAGCTACTCGTCTGAGTCGG +
Preference number: 6 (lower is better)
Translates to: ETVTSLTAFLSP*VWIRKATRLSR
Trigger: CCGACTCAGACGAGTAGCTTTCCTTATCCAGACCCAGGGGCTCAAGAAAGCAGTGAGGCTGGTCACAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532507.5
CDS CAA 90 bp AGAGAGGGGCAACAACTCACCCAAAGTTTCAGGACTTCTTTGTACTaGTGGTCTTTCTGCTACCTCCCCGCTCCTGGCTCTGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: REGQQLTQSFRTSLY*WSFCYLPAPGSASC
Trigger: GCAGCTGGCAGAGCCAGGAGCGGGGAGGTAGCAGAAAGACCACAAGTACAAAGAAGTCCTGAAACTTTGGGTGAGTTGTTGCCCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS TCA 72 bp TTCAACTGTCCCAACTCGAACTGCTGTTCTGGTGTCTaGTGTAGATCCCAGGCATGGGAGGTCAGGGGTCAC +
Preference number: 6 (lower is better)
Translates to: FNCPNSNCCSGV*CRSQAWEVRGH
Trigger: GTGACCCCTGACCTCCCATGCCTGGGATCTACATCAGACACCAGAACAGCAGTTCGAGTTGGGACAGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527304.1
ENST00000530153.5
CDS GCA 72 bp CACAGGCCCCTAGTGCCCACATCACACTGTGGCAAGTaGAGCCACTCCCAAAGCAAAGACTCCAAAAGATAC +
Preference number: 6 (lower is better)
Translates to: HRPLVPTSHCGK*SHSQSKDSKRY
Trigger: GTATCTTTTGGAGTCTTTGCTTTGGGAGTGGCTGCACTTGCCACAGTGTGATGTGGGCACTAGGGGCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 72 bp TGTTTCTGTGTCCTCCACCTTCAGCCATTTCGGCGCTaGTGCTTCTCAGAGCATGACCTCTCCTCAACCTCT +
Preference number: 6 (lower is better)
Translates to: CFCVLHLQPFRR*CFSEHDLSSTS
Trigger: AGAGGTTGAGGAGAGGTCATGCTCTGAGAAGCACCAGCGCCGAAATGGCTGAAGGTGGAGGACACAGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 72 bp GCTTCAGAGATAAACTTTAGAGTATGGGGAGCAGGCTaGGCCCTGTACCATTCCCAGGGTGAGCTTTGGGCA +
Preference number: 6 (lower is better)
Translates to: ASEINFRVWGAG*ALYHSQGELWA
Trigger: TGCCCAAAGCTCACCCTGGGAATGGTACAGGGCCCAGCCTGCTCCCCATACTCTAAAGTTTATCTCTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526647.1
CDS CCA 72 bp TGGAGGACAGACGGAACTGGCTGCACCTCAAGCTCTTaGAGTGGATTGCCTAAGGCTCTCTTCTTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: WRTDGTGCTSSS*SGLPKALFFSS
Trigger: TGAGGAGAAGAAGAGAGCCTTAGGCAATCCACTCCAAGAGCTTGAGGTGCAGCCAGTTCCGTCTGTCCTCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS CAA 90 bp AATGGGCTGCAGCAGCAAAACCAAAGTTTCAGGACTTCTTTGTACTaGTGGTCTTTCTGCTACCTCCCCGCTCCTGGCTCTGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: NGLQQQNQSFRTSLY*WSFCYLPAPGSASC
Trigger: GCAGCTGGCAGAGCCAGGAGCGGGGAGGTAGCAGAAAGACCACAAGTACAAAGAAGTCCTGAAACTTTGGTTTTGCTGCTGCAGCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS TCA 72 bp GGGTTGGGGATCGCAGGTCGGGCTTGCCCAAGCTGTTaGGCTGTTTCACTCTCCCTTTTTACAGATTCTGAA +
Preference number: 6 (lower is better)
Translates to: GLGIAGRACPSC*AVSLSLFTDSE
Trigger: TTCAGAATCTGTAAAAAGGGAGAGTGAAACAGCTCAACAGCTTGGGCAAGCCCGACCTGCGATCCCCAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 72 bp GGGCCAACAGTGGGGTGGGGCATCTCATCTAGCCCTTaGGCTGAAGTTTGCTGCTTAGTAATTAGTACAGAC +
Preference number: 6 (lower is better)
Translates to: GPTVGWGISSSP*AEVCCLVISTD
Trigger: GTCTGTACTAATTACTAAGCAGCAAACTTCAGCCCAAGGGCTAGATGAGATGCCCCACCCCACTGTTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526647.1
CDS CAA 72 bp GCTTATGGCCCACCTGAGAGATACCAATTTCTTAACTaGTCCAAACCGCAGCTGCAGGCTGGGGTCAAGGAC +
Preference number: 6 (lower is better)
Translates to: AYGPPERYQFLN*SKPQLQAGVKD
Trigger: GTCCTTGACCCCAGCCTGCAGCTGCGGTTTGGACAAGTTAAGAAATTGGTATCTCTCAGGTGGGCCATAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS TCA 72 bp ACTCCAGGCCAGACAAATTGGTTCAGCAGCTCTACCTaGTGTCCAGGTGCCCTCCATGACCACCTTTACTAT +
Preference number: 6 (lower is better)
Translates to: TPGQTNWFSSST*CPGALHDHLYY
Trigger: ATAGTAAAGGTGGTCATGGAGGGCACCTGGACATCAGGTAGAGCTGCTGAACCAATTTGTCTGGCCTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 72 bp AGGGTCTTGTGCTCCATGTCGTCACTCTCAATGGGCTaGAGCAGCAAAATGTTGTTGGACTTGAGATCACGG +
Preference number: 6 (lower is better)
Translates to: RVLCSMSSLSMG*SSKMLLDLRSR
Trigger: CCGTGATCTCAAGTCCAACAACATTTTGCTGCTGCAGCCCATTGAGAGTGACGACATGGAGCACAAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309100.8
ENST00000524856.1
CDS GCA 72 bp AGAGATACCAATTTCTTAACTTGTCCAAACCGCAGCTaGAGGCTGGGGTCAAGGACTTCTGAAGCTGGCGCA +
Preference number: 6 (lower is better)
Translates to: RDTNFLTCPNRS*RLGSRTSEAGA
Trigger: TGCGCCAGCTTCAGAAGTCCTTGACCCCAGCCTGCAGCTGCGGTTTGGACAAGTTAAGAAATTGGTATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CAA 72 bp GAGGGGCAACAACTCACCCAAAGTTTCAGGACTTCTTaGTACTTGTGGTCTTTCTGCTACCTCCCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: EGQQLTQSFRTS*YLWSFCYLPAP
Trigger: AGGAGCGGGGAGGTAGCAGAAAGACCACAAGTACAAAGAAGTCCTGAAACTTTGGGTGAGTTGTTGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CAA 72 bp TGGTCTCAAAATCTACCCACTCCTCTGAGCCAGACCTaGGAGCTGAGTCCTGAACACTTCATCAAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: WSQNLPTPLSQT*ELSPEHFIKLR
Trigger: CCTCAGCTTGATGAAGTGTTCAGGACTCAGCTCCAAGGTCTGGCTCAGAGGAGTGGGTAGATTTTGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CAA 72 bp GGGCTGCAGCAGCAAAACCAAAGTTTCAGGACTTCTTaGTACTTGTGGTCTTTCTGCTACCTCCCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: GLQQQNQSFRTS*YLWSFCYLPAP
Trigger: AGGAGCGGGGAGGTAGCAGAAAGACCACAAGTACAAAGAAGTCCTGAAACTTTGGTTTTGCTGCTGCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530153.5
CDS TCA 72 bp CCGCTTCTTCATATCCCTTCCCCATTGGCAGAAACCTaGGACTTGTCCAGAACTTTGCCCAGGATTGGATTC +
Preference number: 6 (lower is better)
Translates to: PLLHIPSPLAET*DLSRTLPRIGF
Trigger: GAATCCAATCCTGGGCAAAGTTCTGGACAAGTCTCAGGTTTCTGCCAATGGGGAAGGGATATGAAGAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS GCA 72 bp GGGTGGGGCATCTCATCTAGCCCTTGGGCTGAAGTTTaGTGCTTAGTAATTAGTACAGACACTGACACCAAC +
Preference number: 6 (lower is better)
Translates to: GWGISSSPWAEV*CLVISTDTDTN
Trigger: GTTGGTGTCAGTGTCTGTACTAATTACTAAGCAGCAAACTTCAGCCCAAGGGCTAGATGAGATGCCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526647.1
CDS CCA 72 bp TGTGGAAGAGAAGCAATATCAAGTCAACCATGTTTCTaGACCCATGTCAGGGCACACCTCTCAGCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: CGREAISSQPCF*THVRAHLSALL
Trigger: CAGGAGAGCTGAGAGGTGTGCCCTGACATGGGTCCAGAAACATGGTTGACTTGATATTGCTTCTCTTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CAA 90 bp TCCAGAGAATGGTCTCAAAATCTACCCACTCCTCTGAGCCAGACCTaGGAGCTGAGTCCTGAACACTTCATCAAGCTGAGGATGACAACA +
Preference number: 6 (lower is better)
Translates to: SREWSQNLPTPLSQT*ELSPEHFIKLRMTT
Trigger: TGTTGTCATCCTCAGCTTGATGAAGTGTTCAGGACTCAGCTCCAAGGTCTGGCTCAGAGGAGTGGGTAGATTTTGAGACCATTCTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CAA 90 bp CCAAATGGGGCCACCGTACTTGGTACAAAGAGGAGAAGCAGCAACTaGCATATCTCTCACCAGGACAGGAATGGCTCAAATGAGAGAAGT +
Preference number: 6 (lower is better)
Translates to: PNGATVLGTKRRSSN*HISHQDRNGSNERS
Trigger: ACTTCTCTCATTTGAGCCATTCCTGTCCTGGTGAGAGATATGCAAGTTGCTGCTTCTCCTCTTTGTACCAAGTACGGTGGCCCCATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS TCA 72 bp CCTCACAACTTCTGGATAGGGCTGCCCCAATTGCTTTaGGCCTGTCACTTTAAGAAAGACGACGCTATCCTA +
Preference number: 6 (lower is better)
Translates to: PHNFWIGLPQLL*ACHFKKDDAIL
Trigger: TAGGATAGCGTCGTCTTTCTTAAAGTGACAGGCTCAAAGCAATTGGGGCAGCCCTATCCAGAAGTTGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS GCA 72 bp CAGGTGCCCTCCATGACCACCTTTACTATCCCGGCATaGCCAGTAGATTTTCCTGCAATTTTTCCTAATCCA +
Preference number: 6 (lower is better)
Translates to: QVPSMTTFTIPA*PVDFPAIFPNP
Trigger: TGGATTAGGAAAAATTGCAGGAAAATCTACTGGGCATGCCGGGATAGTAAAGGTGGTCATGGAGGGCACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 72 bp CCACCGTACTTGGTACAAAGAGGAGAAGCAGCAACTTaGATATCTCTCACCAGGACAGGAATGGCTCAAATG +
Preference number: 6 (lower is better)
Translates to: PPYLVQRGEAAT*ISLTRTGMAQM
Trigger: CATTTGAGCCATTCCTGTCCTGGTGAGAGATATGCAAGTTGCTGCTTCTCCTCTTTGTACCAAGTACGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 72 bp TGGGGCATCTCATCTAGCCCTTGGGCTGAAGTTTGCTaGTTAGTAATTAGTACAGACACTGACACCAACTGC +
Preference number: 6 (lower is better)
Translates to: WGISSSPWAEVC*LVISTDTDTNC
Trigger: GCAGTTGGTGTCAGTGTCTGTACTAATTACTAAGCAGCAAACTTCAGCCCAAGGGCTAGATGAGATGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526647.1
CDS CCA 72 bp TCCCTTTTTACAGATTCTGAAATTGAGGCTCCGAGTTaGAGTAACCAGCTAGAGGTCATGAAGCCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: SLFTDSEIEAPS*SNQLEVMKPGR
Trigger: CCTCCCTGGCTTCATGACCTCTAGCTGGTTACTCCAACTCGGAGCCTCAATTTCAGAATCTGTAAAAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CCA 72 bp TGGGAAACAATCCGCTTCTTCATATCCCTTCCCCATTaGCAGAAACCTGAGACTTGTCCAGAACTTTGCCCA +
Preference number: 6 (lower is better)
Translates to: WETIRFFISLPH*QKPETCPELCP
Trigger: TGGGCAAAGTTCTGGACAAGTCTCAGGTTTCTGCCAATGGGGAAGGGATATGAAGAAGCGGATTGTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS CAA 72 bp GCCACCGTACTTGGTACAAAGAGGAGAAGCAGCAACTaGCATATCTCTCACCAGGACAGGAATGGCTCAAAT +
Preference number: 6 (lower is better)
Translates to: ATVLGTKRRSSN*HISHQDRNGSN
Trigger: ATTTGAGCCATTCCTGTCCTGGTGAGAGATATGCAAGTTGCTGCTTCTCCTCTTTGTACCAAGTACGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 72 bp CTGAAGGGCCCCTCTACTTTTCAGGTTACAGCCAACTaGACTGTGGAAGAGAAGCAATATCAAGTCAACCAT +
Preference number: 6 (lower is better)
Translates to: LKGPSTFQVTAN*TVEEKQYQVNH
Trigger: ATGGTTGACTTGATATTGCTTCTCTTCCACAGTGCAGTTGGCTGTAACCTGAAAAGTAGAGGGGCCCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS CAA 90 bp ACTGAAGCAAAACTGGCAAGGTGGCAGCTCTGGACATTTATGGCTTaGATTTCAAGAGAGATCTGTGAGTCTCCTGTCATTTTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: TEAKLARWQLWTFMA*ISREICESPVILLR
Trigger: CCTCAACAAAATGACAGGAGACTCACAGATCTCTCTTGAAATCAAAGCCATAAATGTCCAGAGCTGCCACCTTGCCAGTTTTGCTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS TCA 72 bp AACTGGCAAGGTGGCAGCTCTGGACATTTATGGCTTTaGTTTCAAGAGAGATCTGTGAGTCTCCTGTCATTT +
Preference number: 6 (lower is better)
Translates to: NWQGGSSGHLWL*FQERSVSLLSF
Trigger: AAATGACAGGAGACTCACAGATCTCTCTTGAAATCAAAGCCATAAATGTCCAGAGCTGCCACCTTGCCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527304.1
CDS GCA 72 bp TTAAGAAAGACGACGCTATCCTATTTCGACTATTCCTaGCTGTTACGGAAGGTTGTTCTCTACACCCTAGGT +
Preference number: 6 (lower is better)
Translates to: LRKTTLSYFDYS*LLRKVVLYTLG
Trigger: ACCTAGGGTGTAGAGAACAACCTTCCGTAACAGGCAGGAATAGTCGAAATAGGATAGCGTCGTCTTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524856.1
CDS CAA 72 bp GTAATTAGTACAGACACTGACACCAACTGCCTGAGTTaGATTCTGGCTCTTCCACTTATTAACTGTGTAACA +
Preference number: 6 (lower is better)
Translates to: VISTDTDTNCLS*ILALPLINCVT
Trigger: TGTTACACAGTTAATAAGTGGAAGAGCCAGAATCAAACTCAGGCAGTTGGTGTCAGTGTCTGTACTAATTAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526647.1
CDS CAA 90 bp TGCTGCTTAGTAATTAGTACAGACACTGACACCAACTGCCTGAGTTaGATTCTGGCTCTTCCACTTATTAACTGTGTAACAAGTTACTTT +
Preference number: 6 (lower is better)
Translates to: CCLVISTDTDTNCLS*ILALPLINCVTSYF
Trigger: AAAGTAACTTGTTACACAGTTAATAAGTGGAAGAGCCAGAATCAAACTCAGGCAGTTGGTGTCAGTGTCTGTACTAATTACTAAGCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526647.1