RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP2K7 (Homo sapiens)

Ensembl gene IDs: ENSG00000076984

Ensembl transcript IDs: ENST00000397979.4, ENST00000397981.7, ENST00000397983.7, ENST00000465324.1, ENST00000468058.1, ENST00000475022.1, ENST00000494348.1, ENST00000498118.1

Found 475 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCAGGGGACAGAGGGCGACGGAAGAGGAACGGGCGCGTGGGAGTaGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGG +
Preference number: 1 (lower is better)
Translates to: EQGTEGDGRGTGAWE*RRTQHAGSVHGGCG
Trigger: CCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCCGTCGCCCTCTGTCCCCTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 90 bp CGGAAGAGGAACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTaGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTCTCCTGG +
Preference number: 1 (lower is better)
Translates to: RKRNGRVGVAKDTAR*ERAWWLRDSRALSW
Trigger: CCAGGAGAGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR GCA 90 bp GCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTGCACCATaGCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGG +
Preference number: 1 (lower is better)
Translates to: APLRHRFPPVTCSAP*PKTTFPEGHPVRPG
Trigger: CCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATGGTGCAGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 90 bp GAGGTAGAGCAGGGGACAGAGGGCGACGGAAGAGGAACGGGCGCGTaGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGC +
Preference number: 1 (lower is better)
Translates to: EVEQGTEGDGRGTGA*EWRRTQHAGSVHGG
Trigger: GCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCCGTCGCCCTCTGTCCCCTGCTCTACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 90 bp GCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGGCTaGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCC +
Preference number: 1 (lower is better)
Translates to: AQPRPAAVAMPTLPG*GPLTHCAMGDLCRP
Trigger: GGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 90 bp GAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTaGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAG +
Preference number: 1 (lower is better)
Translates to: ERAAPSSRSGNAHTA*LGATDSLRHGRPMQ
Trigger: CTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 90 bp TCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGGGTGAGTaGAGGGACGGCCAGGGGCACGATGGGAGTGACCACCTCGCACCC +
Preference number: 1 (lower is better)
Translates to: SQSWTSTWTGPGVGE*RDGQGHDGSDHLAP
Trigger: GGGTGCGAGGTGGTCACTCCCATCGTGCCCCTGGCCGTCCCTCCACTCACCCACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 90 bp CCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTaGGTGAGTGGAGGGACGGCCAGGGGCACGATGGGAGTGACCACC +
Preference number: 1 (lower is better)
Translates to: PVLPSPGPQRGLGQV*VSGGTARGTMGVTT
Trigger: GGTGGTCACTCCCATCGTGCCCCTGGCCGTCCCTCCACTCACCCACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 90 bp ACCTGGCCTGGGTCCCCGGTGCACTCACCCGGTCCTTCCCAGTCCTaGACCTCAACGTGGACTGGGCCAGGTGTGGGTGAGTGGAGGGAC +
Preference number: 1 (lower is better)
Translates to: TWPGSPVHSPGPSQS*TSTWTGPGVGEWRD
Trigger: GTCCCTCCACTCACCCACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTGCACCGGGGACCCAGGCCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR GCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTaGCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGAT +
Preference number: 1 (lower is better)
Translates to: RVNRLSERRGMLRLR*PHHGQPASAPLVLD
Trigger: ATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCAGCCCAGCTCCCCAGTaGCCGAGGGCGGTTGGGGCC +
Preference number: 2 (lower is better)
Translates to: ERDATPTLPPPRPAGFCASPAPQ*PRAVGA
Trigger: GGCCCCAACCGCCCTCGGGCACTGGGGAGCTGGGCT...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTGGACCCGTCAGGAGGTaGCTGGGCCCAGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPAGPVRR*LGPGSG
Trigger: GCCTGAGCCTGGGCCCAGCCACCTCCTGACGGGTCC...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCAGGACCCGTCAGGAGGTaGCTGGGCCCAGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: HAPRPPSLKAILCGQGPAGPVRR*LGPGSG
Trigger: GCCTGAGCCTGGGCCCAGCCACCTCCTGACGGGTCC...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCGCCATGGGAGACCTATaGAGACCCAGGGGACCCGTC +
Preference number: 2 (lower is better)
Translates to: RERERAAPSSRSGNAHTAAMGDL*RPRGPV
Trigger: GACGGGTCCCCTGGGTCTGCATAGGTCTCCCATGGC...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCACGCACACGGCCGGCTaGCCCCGGGGTGGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPTHTAG*PRGGKG
Trigger: GCCCTTCCCACCCCGGGGTCAGCCGGCCGTGTGCGT...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGGAGGCTGCGGCTGAATaGACAGCGACTCTGATCGCG +
Preference number: 2 (lower is better)
Translates to: RARARSPVQPQWQCPHCLEAAAE*TATLIA
Trigger: CGCGATCAGAGTCGCTGTTCATTCAGCCGCAGCCTC...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCAAGCACGCTGGGAGCGTaGATGGTGGCTGCGGGACTC +
Preference number: 2 (lower is better)
Translates to: HAPRPPSLKAILCGQGPASTLGA*MVAAGL
Trigger: GAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCT...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTCCCTCCGGTCACCTaGTCTGCACCATGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAFPPVT*SAPCPK
Trigger: CTTGGGGCATGGTGCAGAGCAGGTGACCGGAGGGAA...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCAAGGACACAGCACGCTaGGAGCGTGCATGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAKDTAR*ERAWWL
Trigger: CAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTT...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTAGAGGAACGGGCGCGTaGGAGTGGCGAAGGACACAG +
Preference number: 2 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPARGTGA*EWRRTQ
Trigger: CTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCT...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGAGCCCAGCTCCCCAGTaGCCGAGGGCGGTTGGGGCC +
Preference number: 2 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLSPAPQ*PRAVGA
Trigger: GGCCCCAACCGCCCTCGGGCACTGGGGAGCTGGGCT...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGCCCGGCCCCCACCCCTaGTGGAGCTTGTCACACGTC +
Preference number: 2 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVPGPHP*WSLSHV
Trigger: GACGTGTGACAAGCTCCAGCAGGGGTGGGGGCCGGG...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATATGCTACGCCTACGCTaGCCCCACCACGGCCAGCCG +
Preference number: 2 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDMLRLR*PHHGQP
Trigger: CGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCAT...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATCGCTGGGAGCGTGCATaGTGGCTGCGGGACTCCAGG +
Preference number: 2 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDRWERA*WLRDSR
Trigger: CCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCG...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTAATGCCCACACTGCCTaGCTGGGGGCCACTGACTCA +
Preference number: 2 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPANAHTA*LGATDS
Trigger: TGAGTCAGTGGCCCCCAGCCAGGCAGTGTGGGCATT...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGACGGGCGCGTGGGAGTaGCGAAGGACACAGCACGCT +
Preference number: 2 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGTGAWE*RRTQHA
Trigger: AGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGT...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTGAGGCTGCGGCTGAATaGACAGCGACTCTGATCGCG +
Preference number: 2 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSEAAAE*TATLIA
Trigger: CGCGATCAGAGTCGCTGTTCATTCAGCCGCAGCCTC...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATCAAGACCACCTTCCCTaGAGGCCATCCTGTGCGGCC +
Preference number: 2 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDQDHLP*RPSCAA
Trigger: GGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTG...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGTCTGCCCTCCATCCCTaGCTCCCTCCGGACCCCTCC +
Preference number: 2 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLSALHP*LPPDPS
Trigger: GGAGGGGTCCGGAGGGAGTCAGGGATGGAGGGCAGA...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGGTCCTCAGTCCTAGGTaGCCGTCCAGGTCCCAGGTC +
Preference number: 2 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVVLSPR*PSRSQV
Trigger: GACCTGGGACCTGGACGGCCACCTAGGACTGAGGAC...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCAGGACCCGTCAGGAGGTaGCTGGGCCCAGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: DPLRSKRERERERERERAGPVRR*LGPGSG
Trigger: GCCTGAGCCTGGGCCCAGCCACCTCCTGACGGGTCC...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGCTGGCTGGGGGCCACTaGCTCATTGCGCCATGGGAG +
Preference number: 2 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLLAGGH*LIAPWE
Trigger: CTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCAG...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATTTCCCTCCGGTCACCTaGTCTGCACCATGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDFPPVT*SAPCPK
Trigger: CTTGGGGCATGGTGCAGAGCAGGTGACCGGAGGGAA...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGTCCTCAGTCCTAGGTaGCCGTCCAGGTCCCAGGTC +
Preference number: 2 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTVLSPR*PSRSQV
Trigger: GACCTGGGACCTGGACGGCCACCTAGGACTGAGGAC...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGAATGCCCACACTGCCTaGCTGGGGGCCACTGACTCA +
Preference number: 2 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVNAHTA*LGATDS
Trigger: TGAGTCAGTGGCCCCCAGCCAGGCAGTGTGGGCATT...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATCGGCCAGCCGGCTTCTaGGCCTTTGGTGTTGGATTT +
Preference number: 2 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDRPAGF*AFGVGF
Trigger: AAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCG...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACGGCCCCCACCCCTGCTaGAGCTTGTCACACGTCCTC +
Preference number: 2 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHGPHPC*SLSHVL
Trigger: GAGGACGTGTGACAAGCTCCAGCAGGGGTGGGGGCC...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATAATGAACAGCGACTCTaGTCGCGGCCTGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDNEQRL*SRPAVF
Trigger: GAAGACAGCAGGCCGCGATCAGAGTCGCTGTTCATT...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACGTCCTCAGTCCTAGGTaGCCGTCCAGGTCCCAGGTC +
Preference number: 2 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHVLSPR*PSRSQV
Trigger: GACCTGGGACCTGGACGGCCACCTAGGACTGAGGAC...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGAAGGACACAGCACGCTaGGAGCGTGCATGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLKDTAR*ERAWWL
Trigger: CAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTT...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCGTCAGGAGGTGGCTaGGCCCAGGCTCAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPPSGGG*AQAQAR
Trigger: TCTGGCCTGAGCCTGGGCCCAGCCACCTCCTGACGG...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACTGGCTGGGGGCCACTaGCTCATTGCGCCATGGGAG +
Preference number: 2 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPLAGGH*LIAPWE
Trigger: CTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCAG...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCGTCCAGCCGCAGTaGCAATGCCCACACTGCCTG +
Preference number: 2 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPPVQPQ*QCPHCL
Trigger: CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGG...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTGTGCCCGAGGGCGGTTaGGGCCCCACCACAAGCAGC +
Preference number: 2 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTVPEGG*GPTTSS
Trigger: GCTGCTTGTGGTGGGGCCCCAACCGCCCTCGGGCAC...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACGGTCCTTCCCAGTCCTaGACCTCAACGTGGACTGGG +
Preference number: 2 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHGPSQS*TSTWTG
Trigger: CCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACC...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGAATGAACAGCGACTCTaGTCGCGGCCTGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLNEQRL*SRPAVF
Trigger: GAAGACAGCAGGCCGCGATCAGAGTCGCTGTTCATT...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACCCCAGAGGCTGCGGCTaGATGAACAGCGACTCTGAT +
Preference number: 2 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHPRGCG*MNSDSD
Trigger: ATCAGAGTCGCTGTTCATTCAGCCGCAGCCTCTGGG...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCACCCAGAGGCTGCGGCTaGATGAACAGCGACTCTGAT +
Preference number: 2 (lower is better)
Translates to: DPLRSKRERERERERERAPRGCG*MNSDSD
Trigger: ATCAGAGTCGCTGTTCATTCAGCCGCAGCCTCTGGG...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCAGGGCCACTGACTCATTaGGCCATGGGAGACCTATGC +
Preference number: 2 (lower is better)
Translates to: DPLRSKRERERERERERAGPLTH*AMGDLC
Trigger: GCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCC...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCAGAGGCTGCGGCTGAATaGACAGCGACTCTGATCGCG +
Preference number: 2 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPEAAAE*TATLIA
Trigger: CGCGATCAGAGTCGCTGTTCATTCAGCCGCAGCCTC...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCAACTCTGATCGCGGCCTaGTGTCTTCCGTTCACAGTG +
Preference number: 2 (lower is better)
Translates to: DPLRSKRERERERERERATLIAA*CLPFTV
Trigger: CACTGTGAACGGAAGACAGCAGGCCGCGATCAGAGT...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGCCAAAAAGGACCCCCTaGGATCAAAGAGAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLPKRTP*DQRERE
Trigger: CTCTCTCTCTCTTTGATCTCAGGGGGTCCTTTTTGG...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTGCCATGGGAGACCTATaGAGACCCAGGGGACCCGTC +
Preference number: 2 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTAMGDL*RPRGPV
Trigger: GACGGGTCCCCTGGGTCTGCATAGGTCTCCCATGGC...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCAGGGCCACTGACTCATTaGGCCATGGGAGACCTATGC +
Preference number: 2 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPGPLTH*AMGDLC
Trigger: GCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCC...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATACGCACACGGCCGGCTaGCCCCGGGGTGGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNTHTAG*PRGGKG
Trigger: GCCCTTCCCACCCCGGGGTCAGCCGGCCGTGTGCGT...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACAGCACGCTGGGAGCGTaGATGGTGGCTGCGGGACTC +
Preference number: 2 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNSTLGA*MVAAGL
Trigger: GAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCT...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTCCGGTCACCTGCTCTaGACCATGCCCCAAGACCAC +
Preference number: 2 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTSGHLL*TMPQDH
Trigger: GTGGTCTTGGGGCATGGTGCAGAGCAGGTGACCGGA...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTCCCTCCGGTCACCTaGTCTGCACCATGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTFPPVT*SAPCPK
Trigger: CTTGGGGCATGGTGCAGAGCAGGTGACCGGAGGGAA...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTCACATCCACTCCCTCTaGCCTCCATCCCTGACTCCC +
Preference number: 2 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTHIHSL*PPSLTP
Trigger: GGGAGTCAGGGATGGAGGGCAGAGGGAGTGGATGTG...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTAAGGACACAGCACGCTaGGAGCGTGCATGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTKDTAR*ERAWWL
Trigger: CAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTT...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACACGGGCGCGTGGGAGTaGCGAAGGACACAGCACGCT +
Preference number: 2 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNTGAWE*RRTQHA
Trigger: AGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGT...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACGGCCCCCACCCCTGCTaGAGCTTGTCACACGTCCTC +
Preference number: 2 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNGPHPC*SLSHVL
Trigger: GAGGACGTGTGACAAGCTCCAGCAGGGGTGGGGGCC...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACGCCATGGGAGACCTATaGAGACCCAGGGGACCCGTC +
Preference number: 2 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNAMGDL*RPRGPV
Trigger: GACGGGTCCCCTGGGTCTGCATAGGTCTCCCATGGC...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTAATGAACAGCGACTCTaGTCGCGGCCTGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTNEQRL*SRPAVF
Trigger: GAAGACAGCAGGCCGCGATCAGAGTCGCTGTTCATT...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCAAAAAGGACCCCCTaGGATCAAAGAGAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPPKRTP*DQRERE
Trigger: CTCTCTCTCTCTTTGATCTCAGGGGGTCCTTTTTGG...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTACTCTGATCGCGGCCTaGTGTCTTCCGTTCACAGTG +
Preference number: 2 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTTLIAA*CLPFTV
Trigger: CACTGTGAACGGAAGACAGCAGGCCGCGATCAGAGT...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATGTGCCCGAGGGCGGTTaGGGCCCCACCACAAGCAGC +
Preference number: 2 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNVPEGG*GPTTSS
Trigger: GCTGCTTGTGGTGGGGCCCCAACCGCCCTCGGGCAC...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR TCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACTTTTTCTTGTCCACTTaGTTTGCATGCAACACCCAC +
Preference number: 2 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHFFLST*FACNTH
Trigger: GTGGGTGTTGCATGCAAATCAAGTGGACAAGAAAAA...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATCGCTGGGAGCGTGCATaGTGGCTGCGGGACTCCAGG +
Preference number: 2 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNRWERA*WLRDSR
Trigger: CCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCG...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATCCGTCAGGAGGTGGCTaGGCCCAGGCTCAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNPSGGG*AQAQAR
Trigger: TCTGGCCTGAGCCTGGGCCCAGCCACCTCCTGACGG...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACCTTGTCCACTTGATTTaGATGCAACACCCACAAAAA +
Preference number: 2 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHLVHLI*MQHPQK
Trigger: TTTTTGTGGGTGTTGCATGCAAATCAAGTGGACAAG...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATCCCGTCCAGCCGCAGTaGCAATGCCCACACTGCCTG +
Preference number: 2 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNPVQPQ*QCPHCL
Trigger: CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGG...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR GCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATACTCTGATCGCGGCCTaGTGTCTTCCGTTCACAGTG +
Preference number: 2 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNTLIAA*CLPFTV
Trigger: CACTGTGAACGGAAGACAGCAGGCCGCGATCAGAGT...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATCGGCTTCTGCGCCTTTaGTGTTGGATTTTCTTTGTG +
Preference number: 2 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNRLLRL*CWIFFV
Trigger: CACAAAGAAAATCCAACACCAAAGGCGCAGAAGCCG...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CAA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTAGTGCCCGAGGGCGGTaGGGGCCCCACCACAAGCAG +
Preference number: 3 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPASARGR*GPHHKQ
Trigger: CTGCTTGTGGTGGGGCCCCAACCGCCCTCGGGCACT...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR GCA 72 bp CCGGCCTCGGGCCTGTGCTGGCCCTGGGACCAGCCATaGAACCTTCCGGCAATCGCAGAGGCCCCCATGGCT +
Preference number: 3 (lower is better)
Translates to: PASGLCWPWDQP*NLPAIAEAPMA
Trigger: AGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGGGCCAGCACAGGCCCGAGGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 72 bp AACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTaGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCT +
Preference number: 3 (lower is better)
Translates to: NGRVGVAKDTAR*ERAWWLRDSRA
Trigger: AGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 72 bp CAGGGGACAGAGGGCGACGGAAGAGGAACGGGCGCGTaGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTG +
Preference number: 3 (lower is better)
Translates to: QGTEGDGRGTGA*EWRRTQHAGSV
Trigger: CACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCCGTCGCCCTCTGTCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CAA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCGGGGCCACTGACTCATaGCGCCATGGGAGACCTATG +
Preference number: 3 (lower is better)
Translates to: RERERAAPSSRSGNAHTAGATDS*RHGRPM
Trigger: CATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCC...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR GCA 72 bp CGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTaGATGGTGGCTGCGGGACTCCAGGGCTCTCTCCTG +
Preference number: 3 (lower is better)
Translates to: RGSGEGHSTLGA*MVAAGLQGSLL
Trigger: CAGGAGAGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 72 bp GCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTaGCTGGGGGCCACTGACTCATTGCGCCATGGGAGA +
Preference number: 3 (lower is better)
Translates to: APSSRSGNAHTA*LGATDSLRHGR
Trigger: TCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 72 bp GGGTCCCCGGTGCACTCACCCGGTCCTTCCCAGTCCTaGACCTCAACGTGGACTGGGCCAGGTGTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: GSPVHSPGPSQS*TSTWTGPGVGE
Trigger: CTCACCCACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTGCACCGGGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 72 bp ACAGAGGGCGACGGAAGAGGAACGGGCGCGTGGGAGTaGCGAAGGACACAGCACGCTGGGAGCGTGCATGGT +
Preference number: 3 (lower is better)
Translates to: TEGDGRGTGAWE*RRTQHAGSVHG
Trigger: ACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCCGTCGCCCTCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR GCA 72 bp AGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTaGCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTG +
Preference number: 3 (lower is better)
Translates to: RLSERRGMLRLR*PHHGQPASAPL
Trigger: CAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CAA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACAGTGCCCGAGGGCGGTaGGGGCCCCACCACAAGCAG +
Preference number: 3 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHSARGR*GPHHKQ
Trigger: CTGCTTGTGGTGGGGCCCCAACCGCCCTCGGGCACT...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR GCA 72 bp TTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTaGTCTGCACCATGCCCCAAGACCACCTTCCCTGAA +
Preference number: 3 (lower is better)
Translates to: LAPLRHRFPPVT*SAPCPKTTFPE
Trigger: TTCAGGGAAGGTGGTCTTGGGGCATGGTGCAGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR CCA 72 bp ATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTaGATGCAGGGGAGGAAAGGGCCAGGCCTGTTGGCA +
Preference number: 3 (lower is better)
Translates to: MQPSGNRRGPHG*MQGRKGPGLLA
Trigger: TGCCAACAGGCCTGGCCCTTTCCTCCCCTGCATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR GCA 72 bp CGTCACCGATTCCCTCCGGTCACCTGCTCTGCACCATaGCCCAAGACCACCTTCCCTGAAGGCCATCCTGTG +
Preference number: 3 (lower is better)
Translates to: RHRFPPVTCSAP*PKTTFPEGHPV
Trigger: CACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATGGTGCAGAGCAGGTGACCGGAGGGAATCGGTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CAA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCGGGGCCACTGACTCATaGCGCCATGGGAGACCTATG +
Preference number: 3 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPGATDS*RHGRPM
Trigger: CATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCC...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CAA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGCACCCCTGCTGGAGCTaGTCACACGTCCTCAAACCC +
Preference number: 3 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLHPCWS*SHVLKP
Trigger: GGGTTTGAGGACGTGTGACAAGCTCCAGCAGGGGTG...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CAA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACCACCCCTGCTGGAGCTaGTCACACGTCCTCAAACCC +
Preference number: 3 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHHPCWS*SHVLKP
Trigger: GGGTTTGAGGACGTGTGACAAGCTCCAGCAGGGGTG...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CAA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACCCGGCTTCTGCGCCTTaGGTGTTGGATTTTCTTTGT +
Preference number: 3 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHPASAP*VLDFLC
Trigger: ACAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGG...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CAA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATGGGGCCACTGACTCATaGCGCCATGGGAGACCTATG +
Preference number: 3 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNGATDS*RHGRPM
Trigger: CATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCC...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR TCA 72 bp CCACAAGCAGCTAATCGTGACTTTGGTAAAAGTTTCTaGAGGTACCGACAACCCCACGAGAACAAGCTCTCC +
Preference number: 3 (lower is better)
Translates to: PQAANRDFGKSF*RYRQPHENKLS
Trigger: GGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTTTACCAAAGTCACGATTAGCTGCTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
3UTR-3UTR CAA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATCCGGCTTCTGCGCCTTaGGTGTTGGATTTTCTTTGT +
Preference number: 3 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNPASAP*VLDFLC
Trigger: ACAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGG...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTACGCACACGGCCGGCTaGCCCCGGGGTGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSTHTAG*PRGGKG
Trigger: GCCCTTCCCACCCCGGGGTCAGCCGGCCGTGTGCGT...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCAGCCCAGCTCCCCAGTaGCCGAGGGCGGTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCSPAPQ*PRAVGA
Trigger: GGCCCCAACCGCCCTCGGGCACTGGGGAGCTGGGCT...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCGGGGCAGGGCGACACTaGCGGCCTGAGGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAGAGRH*RPEEGS
Trigger: GGACCCCTCCTCAGGCCGCCAGTGTCGCCCTGCCCC...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGCTGCGGGGAGCTCTCTaGGGATGGCGAGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLLRGAL*GWRAAA
Trigger: GGCAGCCGCTCGCCATCCTCAGAGAGCTCCCCGCAG...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGACGCACACGGCCGGCTaGCCCCGGGGTGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGTHTAG*PRGGKG
Trigger: GCCCTTCCCACCCCGGGGTCAGCCGGCCGTGTGCGT...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCACACCGCACTGCGCCTaGGCCCGGATGACCCCGTCG +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCTPHCA*ARMTPS
Trigger: CGACGGGGTCATCCGGGCGCAGGCGCAGTGCGGTGT...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397981.7
CDS-3UTR GCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTAGCCCAGCTCCCCAGTaGCCGAGGGCGGTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSSPAPQ*PRAVGA
Trigger: GGCCCCAACCGCCCTCGGGCACTGGGGAGCTGGGCT...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCGGCCTGGGTCCCCGGTaGACTCACCCGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAGLGPR*THPVLP
Trigger: GGGAAGGACCGGGTGAGTGCACCGGGGACCCAGGCC...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCGGCCTGGGTCCCCGGTaGACTCACCCGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RERERAAPSSRSGNAHTAGLGPR*THPVLP
Trigger: GGGAAGGACCGGGTGAGTGCACCGGGGACCCAGGCC...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTCCGGCCTCGGGCCTGTaGTGGCCCTGGGACCAGCCA +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSPASGL*WPWDQP
Trigger: TGGCTGGTCCCAGGGCCAGCACAGGCCCGAGGCCGG...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCCGGGAGCTGCAGGGCTaGTCGTTGGGACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCARELQG*SLGRGR
Trigger: CCTGCCCCGTCCCAACGAGCAGCCCTGCAGCTCCCG...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397983.7
CDS-3UTR CCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCGGACCCGTCAGGAGGTaGCTGGGCCCAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAGPVRR*LGPGSG
Trigger: GCCTGAGCCTGGGCCCAGCCACCTCCTGACGGGTCC...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCGCCTCGGGCCTGTGCTaGCCCTGGGACCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAASGLC*PWDQPC
Trigger: GCATGGCTGGTCCCAGGGCCAGCACAGGCCCGAGGC...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGGCCTCGGGCCTGTGCTaGCCCTGGGACCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLASGLC*PWDQPC
Trigger: GCATGGCTGGTCCCAGGGCCAGCACAGGCCCGAGGC...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGGGCAGGGCGACACTaGCGGCCTGAGGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ARGSGEGHSTLGACMVAAGAGRH*RPEEGS
Trigger: GGACCCCTCCTCAGGCCGCCAGTGTCGCCCTGCCCC...CGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGCTGCGGGGAGCTCTCTaGGGATGGCGAGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ARGSGEGHSTLGACMVAALRGAL*GWRAAA
Trigger: GGCAGCCGCTCGCCATCCTCAGAGAGCTCCCCGCAG...CGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCCCACCAGGCGGCCGCTaGTGCCGAAGTCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RERERAAPSSRSGNAHTAPPGGR*CRSRRA
Trigger: AGCTCTGCGACTTCGGCATCAGCGGCCGCCTGGTGG...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCATTGGCCAGCGGGAGCTaGAGGGTGGGCCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: HAPRPPSLKAILCGQGPALASGS*RVGLGR
Trigger: GCGGCCCAGGCCCACCCTGCAGCTCCCGCTGGCCAA...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397979.4
ENST00000397981.7
CDS-3UTR GCA 90 bp GGAAGAGGAACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGTTGGCCAGCGGGAGCTaGAGGGTGGGCCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GRGTGAWEWRRTQHAGSVLASGS*RVGLGR
Trigger: GCGGCCCAGGCCCACCCTGCAGCTCCCGCTGGCCAA...CACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397979.4
ENST00000397981.7
CDS-3UTR GCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTGGCCTGGGTCCCCGGTaGACTCACCCGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSGLGPR*THPVLP
Trigger: GGGAAGGACCGGGTGAGTGCACCGGGGACCCAGGCC...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGCCGGCCTCGGGCCTGTaGTGGCCCTGGGACCAGCCA +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGPASGL*WPWDQP
Trigger: TGGCTGGTCCCAGGGCCAGCACAGGCCCGAGGCCGG...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCCGGCTTGGTGGGGTCTaGGGGGTCAATGCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: RERERAAPSSRSGNAHTARLGGV*GVNALG
Trigger: CCCGAGCGCATTGACCCCCCAGACCCCACCAAGCCG...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTGTGCCCGAGGGCGGTTaGGGCCCCACCACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPAVPEGG*GPTTSS
Trigger: GCTGCTTGTGGTGGGGCCCCAACCGCCCTCGGGCAC...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGAAGGGCCAGGCCTGTTaGCACCCCCACCCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLKGQAC*HPHPAD
Trigger: GTCTGCCGGGTGGGGGTGCCAACAGGCCTGGCCCTT...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCAAGGGCCAGGCCTGTTaGCACCCCCACCCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAKGQAC*HPHPAD
Trigger: GTCTGCCGGGTGGGGGTGCCAACAGGCCTGGCCCTT...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCCATTGGCTGGTGGGCTaGCCCGAGCCACCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAHWLVG*PEPPSG
Trigger: GCCTGAGGGTGGCTCGGGCCAGCCCACCAGCCAATG...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGGAGGGGTCCATTGGCTaGTGGGCTGGCCCGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLEGSIG*WAGPSH
Trigger: GTGGCTCGGGCCAGCCCACCAGCCAATGGACCCCTC...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGCTGCGGGGAGCTCTCTaGGGATGGCGAGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGLRGAL*GWRAAA
Trigger: GGCAGCCGCTCGCCATCCTCAGAGAGCTCCCCGCAG...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGCCATGCTGCGGGGTGTaGACAGGGTTGACGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLPCCGV*TGLTGA
Trigger: GGCTCCCGTCAACCCTGTTCACACCCCGCAGCATGG...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCCATGCTGCGGGGTGTaGACAGGGTTGACGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCPCCGV*TGLTGA
Trigger: GGCTCCCGTCAACCCTGTTCACACCCCGCAGCATGG...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTACACCTGGCCGCAGGTaGCGCTGCCCATCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSTPGRR*RCPSRP
Trigger: TGGGCGAGATGGGCAGCGGCACCTGCGGCCAGGTGT...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGCCCGGCCCCCACCCCTaGTGGAGCTTGTCACACGTC +
Preference number: 4 (lower is better)
Translates to: ARGSGEGHSTLGACMVAAPGPHP*WSLSHV
Trigger: GACGTGTGACAAGCTCCAGCAGGGGTGGGGGCCGGG...CGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTACCCGGTCCGCCCTCTaGCTGGTCCAGAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPATRSAL*LVQRDG
Trigger: GCCATCCCTCTGGACCAGGCAGAGGGCGGACCGGGT...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGGGCTGCCCCCATCGTTaGCCAGCGGGAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGGCPHR*PAGAAG
Trigger: CCCTGCAGCTCCCGCTGGCCAACGATGGGGGCAGCC...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGCGCATCTTCCACACCTaGCCGCAGGTGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ARGSGEGHSTLGACMVAARIFHT*PQVPLP
Trigger: GGGCAGCGGCACCTGCGGCCAGGTGTGGAAGATGCG...CGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCGCATCTTCCACACCTaGCCGCAGGTGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPARIFHT*PQVPLP
Trigger: GGGCAGCGGCACCTGCGGCCAGGTGTGGAAGATGCG...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTCCGCGTCTTGGCTTTaGAGTCCACCAGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCASASWL*SPPGGR
Trigger: GCGGCCGCCTGGTGGACTCCAAAGCCAAGACGCGGA...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCGGCGCTCCGCGTCTTaGCTTTGGAGTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCRRSAS*LWSPPG
Trigger: GCCTGGTGGACTCCAAAGCCAAGACGCGGAGCGCCG...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCCGGCGCTCCGCGTCTTaGCTTTGGAGTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: RERERAAPSSRSGNAHTARRSAS*LWSPPG
Trigger: GCCTGGTGGACTCCAAAGCCAAGACGCGGAGCGCCG...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCAAGGGCAGGTGGGGCTaGCTCAGGACGCCGCTAGTC +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCKGRWG*LRTPLV
Trigger: GACTAGCGGCGTCCTGAGCCAGCCCCACCTGCCCTT...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTTCCGGACCCCTCCCTTaGCCCCGCTCCGTCACCGAT +
Preference number: 4 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPASGPLP*PRSVTD
Trigger: ATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCGGCCCCCACCCCTGCTaGAGCTTGTCACACGTCCTC +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAGPHPC*SLSHVL
Trigger: GAGGACGTGTGACAAGCTCCAGCAGGGGTGGGGGCC...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCCAGGTGTGGGTGAGTaGAGGGACGGCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPAPGVGE*RDGQGH
Trigger: GTGCCCCTGGCCGTCCCTCCACTCACCCACACCTGG...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGAGGGGTCCATTGGCTaGTGGGCTGGCCCGAGCCAC +
Preference number: 4 (lower is better)
Translates to: ARGSGEGHSTLGACMVAAEGSIG*WAGPSH
Trigger: GTGGCTCGGGCCAGCCCACCAGCCAATGGACCCCTC...CGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCGAAGTCGCAGAGCTTaGTCTGGCCCCGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCRSRRA*SGPARP
Trigger: TGGACGAGCGGGGCCAGATCAAGCTCTGCGACTTCG...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCGCCGCTAGTCCGCGGTaGCTCAGTCTTCGCCATGAC +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCAASPR*LSLRHD
Trigger: GTCATGGCGAAGACTGAGTCACCGCGGACTAGCGGC...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCAAGACCACCTTCCCTaGAGGCCATCCTGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCQDHLP*RPSCAA
Trigger: GGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTG...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGACACCTGGCCGCAGGTaGCGCTGCCCATCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGTPGRR*RCPSRP
Trigger: TGGGCGAGATGGGCAGCGGCACCTGCGGCCAGGTGT...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGGCCATGGGAGACCTATaGAGACCCAGGGGACCCGTC +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLAMGDL*RPRGPV
Trigger: GACGGGTCCCCTGGGTCTGCATAGGTCTCCCATGGC...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGAGCCCAGCTCCCCAGTaGCCGAGGGCGGTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVSPAPQ*PRAVGA
Trigger: GGCCCCAACCGCCCTCGGGCACTGGGGAGCTGGGCT...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCAAACACACCCCCTCCTaGTCTGGCCACCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCKHTPS*SGHPSR
Trigger: CCTGCTGGGGTGGCCAGAGCAGGAGGGGGTGTGTTT...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGAAGAGGAACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGATGCTACGCCTACGCTaGCCCCACCACGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GRGTGAWEWRRTQHAGSVMLRLR*PHHGQP
Trigger: CGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCAT...CACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGATGCTACGCCTACGCTaGCCCCACCACGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGMLRLR*PHHGQP
Trigger: CGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCAT...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCAATGCTACGCCTACGCTaGCCCCACCACGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: HAPRPPSLKAILCGQGPAMLRLR*PHHGQP
Trigger: CGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCAT...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCGTGAGAGGAGAGGGATaGTACGCCTACGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: RERERAAPSSRSGNAHTAVRGEG*YAYAAP
Trigger: GGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCAC...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGCCACCCTCAGGCCCCTaGCCACCCGGTCCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVPPSGP*PPGPPS
Trigger: AGAGGGCGGACCGGGTGGGCAGGGGCCTGAGGGTGG...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGTGGGCCTGGGCCGCTaGGGGCTGATATCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ARGSGEGHSTLGACMVAAVGLGR*GLISRL
Trigger: CAACCTGGATATCAGCCCCCAGCGGCCCAGGCCCAC...CGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397979.4
ENST00000397981.7
CDS-3UTR CCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTCTGAAGAAGGGCAGGTaGGGCTGGCTCAGGACGCCG +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSLKKGR*GWLRTP
Trigger: CGGCGTCCTGAGCCAGCCCCACCTGCCCTTCTTCAG...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATGGCCCCCTGTGGGGCTaGCCGCCGCCAAGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDGPLWG*PPPSSY
Trigger: GTAGCTGCTTGGCGGCGGCCAGCCCCACAGGGGGCC...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGACGGGCGCGTGGGAGTaGCGAAGGACACAGCACGCT +
Preference number: 4 (lower is better)
Translates to: ARGSGEGHSTLGACMVAATGAWE*RRTQHA
Trigger: AGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGT...CGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCACCGTCAGGAGGTGGCTaGGCCCAGGCTCAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: HAPRPPSLKAILCGQGPAPSGGG*AQAQAR
Trigger: TCTGGCCTGAGCCTGGGCCCAGCCACCTCCTGACGG...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCCCGTCCAGCCGCAGTaGCAATGCCCACACTGCCTG +
Preference number: 4 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPAPVQPQ*QCPHCL
Trigger: CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGG...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GGAAGAGGAACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGTCCGGACCCCTCCCTTaGCCCCGCTCCGTCACCGAT +
Preference number: 4 (lower is better)
Translates to: GRGTGAWEWRRTQHAGSVSGPLP*PRSVTD
Trigger: ATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA...CACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGTCGCAGAGGCCCCCATaGCTGGATGCAGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLSQRPP*LDAGEE
Trigger: TTCCTCCCCTGCATCCAGCCATGGGGGCCTCTGCGA...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGCATTGGCTGGTGGGCTaGCCCGAGCCACCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGHWLVG*PEPPSG
Trigger: GCCTGAGGGTGGCTCGGGCCAGCCCACCAGCCAATG...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCCTGCATCCGCTTCTTaGGCTTCTCAGCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCPASAS*ASQRRC
Trigger: GCACCTGCGCTGAGAAGCTCAAGAAGCGGATGCAGG...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTGCCGCTAGTCCGCGGTaGCTCAGTCTTCGCCATGAC +
Preference number: 4 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPAAASPR*LSLRHD
Trigger: GTCATGGCGAAGACTGAGTCACCGCGGACTAGCGGC...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTAGACAAACACCGCACTaGGCCTGCGCCCGGATGACC +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSRQTPH*ACARMT
Trigger: GGTCATCCGGGCGCAGGCGCAGTGCGGTGTTTGTCT...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397981.7
CDS-3UTR GCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCAGGCCGCAGGTGCCGCTaGCCATCTCGCCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HAPRPPSLKAILCGQGPAGRRCR*PSRPSS
Trigger: AGAACTTGGGCGAGATGGGCAGCGGCACCTGCGGCC...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCTCGGGGATGGGGCCCTaGATCCGCTTCTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCSGMGP*IRFLSF
Trigger: GAAGCTCAAGAAGCGGATGCAGGGCCCCATCCCCGA...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCGGGAAACTGTCCTGTTaGCAGCTCCACCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RERERAAPSSRSGNAHTAGKLSC*QLHLGG
Trigger: CCCTCCCAGGTGGAGCTGGCAACAGGACAGTTTCCC...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397981.7
CDS-3UTR GCA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTCCGGTCACCTGCTCTaGACCATGCCCCAAGACCAC +
Preference number: 4 (lower is better)
Translates to: RERERAAPSSRSGNAHTASGHLL*TMPQDH
Trigger: GTGGTCTTGGGGCATGGTGCAGAGCAGGTGACCGGA...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGCACATCCACTCCCTCTaGCCTCCATCCCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLHIHSL*PPSLTP
Trigger: GGGAGTCAGGGATGGAGGGCAGAGGGAGTGGATGTG...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTAAACACACCCCCTCCTaGTCTGGCCACCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPAKHTPS*SGHPSR
Trigger: CCTGCTGGGGTGGCCAGAGCAGGAGGGGGTGTGTTT...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGCCACCCTCAGGCCCCTaGCCACCCGGTCCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTPPSGP*PPGPPS
Trigger: AGAGGGCGGACCGGGTGGGCAGGGGCCTGAGGGTGG...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGAAGAGGAACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGTTGGCCAGCGGGAGCTaGAGGGCTGCTCGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: GRGTGAWEWRRTQHAGSVLASGS*RAARWD
Trigger: GTCCCAACGAGCAGCCCTGCAGCTCCCGCTGGCCAA...CACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397983.7
CDS-3UTR CCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTGAATGCGCTCGGGGATaGGGCCCTGCATCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSECARG*GPASAS
Trigger: AGAAGCGGATGCAGGGCCCCATCCCCGAGCGCATTC...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCGGCTTGACGTCGCGGTaGATGACACCGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCGLTSR*MTPCFS
Trigger: GGAGAAGCACGGTGTCATCCACCGCGACGTCAAGCC...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGGCCCCCTGTGGGGCTaGCCGCCGCCAAGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTGPLWG*PPPSSY
Trigger: GTAGCTGCTTGGCGGCGGCCAGCCCCACAGGGGGCC...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTAGAGGAACGGGCGCGTaGGAGTGGCGAAGGACACAG +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSRGTGA*EWRRTQ
Trigger: CTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCT...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGGGACCCGTCAGGAGGTaGCTGGGCCCAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGGPVRR*LGPGSG
Trigger: GCCTGAGCCTGGGCCCAGCCACCTCCTGACGGGTCC...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCACCCGTCCAGCCGCAGTaGCAATGCCCACACTGCCTG +
Preference number: 4 (lower is better)
Translates to: HAPRPPSLKAILCGQGPAPVQPQ*QCPHCL
Trigger: CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGG...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTCCAGGTGTGGGTGAGTaGAGGGACGGCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSPGVGE*RDGQGH
Trigger: GTGCCCCTGGCCGTCCCTCCACTCACCCACACCTGG...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGGGTCCTTCCCAGTCCTaGACCTCAACGTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLGPSQS*TSTWTG
Trigger: CCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACC...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGAGAGGCCCCCATGGCTaGATGCAGGGGAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: ARGSGEGHSTLGACMVAARGPHG*MQGRKG
Trigger: CCCTTTCCTCCCCTGCATCCAGCCATGGGGGCCTCT...CGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTTCGCAGAGGCCCCCATaGCTGGATGCAGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSSQRPP*LDAGEE
Trigger: TTCCTCCCCTGCATCCAGCCATGGGGGCCTCTGCGA...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGGGTCCGCCCTCTGCCTaGTCCAGAGGGATGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGGPPSA*SRGMAG
Trigger: ACCAGCCATCCCTCTGGACCAGGCAGAGGGCGGACC...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGCCACCAGGCGGCCGCTaGTGCCGAAGTCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGPPGGR*CRSRRA
Trigger: AGCTCTGCGACTTCGGCATCAGCGGCCGCCTGGTGG...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTCTGGCTGGGGGCCACTaGCTCATTGCGCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSLAGGH*LIAPWE
Trigger: CTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCAG...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGTCTGCCCTCCATCCCTaGCTCCCTCCGGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVSALHP*LPPDPS
Trigger: GGAGGGGTCCGGAGGGAGTCAGGGATGGAGGGCAGA...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTTCGGGGATGGGGCCCTaGATCCGCTTCTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSSGMGP*IRFLSF
Trigger: GAAGCTCAAGAAGCGGATGCAGGGCCCCATCCCCGA...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTAGCACGCTGGGAGCGTaGATGGTGGCTGCGGGACTC +
Preference number: 4 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSSTLGA*MVAAGL
Trigger: GAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCT...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGGCCATGGGAGACCTATaGAGACCCAGGGGACCCGTC +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGAMGDL*RPRGPV
Trigger: GACGGGTCCCCTGGGTCTGCATAGGTCTCCCATGGC...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCGGGCCACTGACTCATTaGGCCATGGGAGACCTATGC +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAGPLTH*AMGDLC
Trigger: GCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCC...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCGGGCCACTGACTCATTaGGCCATGGGAGACCTATGC +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCGPLTH*AMGDLC
Trigger: GCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCC...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGGGGCCACTGACTCATTaGGCCATGGGAGACCTATGC +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLGPLTH*AMGDLC
Trigger: GCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCC...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCGGCCAGCCGGCTTCTaGGCCTTTGGTGTTGGATTT +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCRPAGF*AFGVGF
Trigger: AAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCG...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGGTGAGAGGAGAGGGATaGTACGCCTACGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGVRGEG*YAYAAP
Trigger: GGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCAC...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGCCGGCCTCGGGCCTGTaGTGGCCCTGGGACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLPASGL*WPWDQP
Trigger: TGGCTGGTCCCAGGGCCAGCACAGGCCCGAGGCCGG...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGACCCGGTCCGCCCTCTaGCTGGTCCAGAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGTRSAL*LVQRDG
Trigger: GCCATCCCTCTGGACCAGGCAGAGGGCGGACCGGGT...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCCCACCCTCAGGCCCCTaGCCACCCGGTCCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPPPSGP*PPGPPS
Trigger: AGAGGGCGGACCGGGTGGGCAGGGGCCTGAGGGTGG...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTGCTCCACCAACGAGATaGCCAGGCTCCATACGTCGG +
Preference number: 4 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPAAPPTR*PGSIRR
Trigger: CCGACGTATGGAGCCTGGGCATCTCGTTGGTGGAGC...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397979.4
ENST00000397983.7
CDS-3UTR CCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGGAATGCGCTCGGGGATaGGGCCCTGCATCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGECARG*GPASAS
Trigger: AGAAGCGGATGCAGGGCCCCATCCCCGAGCGCATTC...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGCGCTGGGAGCGTGCATaGTGGCTGCGGGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVRWERA*WLRDSR
Trigger: CCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCG...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTAAGGACACAGCACGCTaGGAGCGTGCATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPAKDTAR*ERAWWL
Trigger: CAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTT...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGAGAGGAACGGGCGCGTaGGAGTGGCGAAGGACACAG +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGRGTGA*EWRRTQ
Trigger: CTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCT...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGCCGTCAGGAGGTGGCTaGGCCCAGGCTCAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVPSGGG*AQAQAR
Trigger: TCTGGCCTGAGCCTGGGCCCAGCCACCTCCTGACGG...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCGGTGGCTTTCCTCCCTaGGGGCAGAGAGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCGGFPP*GQREDD
Trigger: GTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGAGGGGCAAGAGAAGGTaGCTTTCCTCCCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: ARGSGEGHSTLGACMVAARGKRR*LSSLGA
Trigger: TGCCCCCAGGGAGGAAAGCCACCTTCTCTTGCCCCT...CGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATCATTGGCTGGTGGGCTaGCCCGAGCCACCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDHWLVG*PEPPSG
Trigger: GCCTGAGGGTGGCTCGGGCCAGCCCACCAGCCAATG...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATGAGGGGTCCATTGGCTaGTGGGCTGGCCCGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDEGSIG*WAGPSH
Trigger: GTGGCTCGGGCCAGCCCACCAGCCAATGGACCCCTC...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGTGCAGGGCTGCTCGTTaGGACGGGGCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVCRAAR*DGAGAG
Trigger: CCCTGCTCCTGCCCCGTCCCAACGAGCAGCCCTGCA...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397983.7
CDS-3UTR TCA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTCGCCAAGCAGCTACCTaGAGAAGGGCAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSRQAAT*RRAGGA
Trigger: AGCCCCACCTGCCCTTCTTCAGGTAGCTGCTTGGCG...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCAGAGGCTGCGGCTGAATaGACAGCGACTCTGATCGCG +
Preference number: 4 (lower is better)
Translates to: HAPRPPSLKAILCGQGPAEAAAE*TATLIA
Trigger: CGCGATCAGAGTCGCTGTTCATTCAGCCGCAGCCTC...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATCTGGCTGGGGGCCACTaGCTCATTGCGCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDLAGGH*LIAPWE
Trigger: CTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCAG...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGAGGATGGCGAGCGGCTaGCCCCATCGTTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTRMASG*PHRWPA
Trigger: CGCTGGCCAACGATGGGGGCAGCCGCTCGCCATCCT...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGAAGAGGAACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGTCATCTTGCCCAGAATaGGCTCGGGGATGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRGTGAWEWRRTQHAGSVSSCPE*ARGWGP
Trigger: AGGGCCCCATCCCCGAGCGCATTCTGGGCAAGATGA...CACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATAGCACGCTGGGAGCGTaGATGGTGGCTGCGGGACTC +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDSTLGA*MVAAGL
Trigger: GAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCT...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGTCCGGTCACCTGCTCTaGACCATGCCCCAAGACCAC +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGSGHLL*TMPQDH
Trigger: GTGGTCTTGGGGCATGGTGCAGAGCAGGTGACCGGA...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCATTCCCTCCGGTCACCTaGTCTGCACCATGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: HAPRPPSLKAILCGQGPAFPPVT*SAPCPK
Trigger: CTTGGGGCATGGTGCAGAGCAGGTGACCGGAGGGAA...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGTTCCCTCCGGTCACCTaGTCTGCACCATGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGFPPVT*SAPCPK
Trigger: CTTGGGGCATGGTGCAGAGCAGGTGACCGGAGGGAA...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGCCCGGCCCCCACCCCTaGTGGAGCTTGTCACACGTC +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTPGPHP*WSLSHV
Trigger: GACGTGTGACAAGCTCCAGCAGGGGTGGGGGCCGGG...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTAAACACACCCCCTCCTaGTCTGGCCACCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSKHTPS*SGHPSR
Trigger: CCTGCTGGGGTGGCCAGAGCAGGAGGGGGTGTGTTT...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTTTAACGGCAATGACGTaGCCGGTCTTCCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSLTAMT*PVFRKR
Trigger: GCGCTTCCGGAAGACCGGCCACGTCATTGCCGTTAA...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCAGGCTTGACGTCGCGGTaGATGACACCGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HAPRPPSLKAILCGQGPAGLTSR*MTPCFS
Trigger: GGAGAAGCACGGTGTCATCCACCGCGACGTCAAGCC...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGTCCGCGTCTTGGCTTTaGAGTCCACCAGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGSASWL*SPPGGR
Trigger: GCGGCCGCCTGGTGGACTCCAAAGCCAAGACGCGGA...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGTTGCCAGCTCCACCTaGGAGGGAGACGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTVASST*EGDGQG
Trigger: GCCCTGCCCGTCTCCCTCCCAGGTGGAGCTGGCAAC...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397981.7
CDS-3UTR CCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATAAGGGCAGGTGGGGCTaGCTCAGGACGCCGCTAGTC +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDKGRWG*LRTPLV
Trigger: GACTAGCGGCGTCCTGAGCCAGCCCCACCTGCCCTT...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATCTGAAGAAGGGCAGGTaGGGCTGGCTCAGGACGCCG +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDLKKGR*GWLRTP
Trigger: CGGCGTCCTGAGCCAGCCCCACCTGCCCTTCTTCAG...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACGGCCCCCTGTGGGGCTaGCCGCCGCCAAGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHGPLWG*PPPSSY
Trigger: GTAGCTGCTTGGCGGCGGCCAGCCCCACAGGGGGCC...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGCGCTGGGAGCGTGCATaGTGGCTGCGGGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTRWERA*WLRDSR
Trigger: CCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCG...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCGGACCCGTCAGGAGGTaGCTGGGCCCAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPGPVRR*LGPGSG
Trigger: GCCTGAGCCTGGGCCCAGCCACCTCCTGACGGGTCC...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCAGGTCCTTCCCAGTCCTaGACCTCAACGTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: HAPRPPSLKAILCGQGPAGPSQS*TSTWTG
Trigger: CCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACC...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCGCCTCGGGCCTGTGCTaGCCCTGGGACCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPASGLC*PWDQPC
Trigger: GCATGGCTGGTCCCAGGGCCAGCACAGGCCCGAGGC...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATGGTCCGCCCTCTGCCTaGTCCAGAGGGATGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDGPPSA*SRGMAG
Trigger: ACCAGCCATCCCTCTGGACCAGGCAGAGGGCGGACC...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACGGGGCAGGGCGACACTaGCGGCCTGAGGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHGAGRH*RPEEGS
Trigger: GGACCCCTCCTCAGGCCGCCAGTGTCGCCCTGCCCC...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGCCACATCCAGGTCCATaGGGATGCGCTTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ARGSGEGHSTLGACMVAAPHPGP*GCACSP
Trigger: AGGAGAACAAGCGCATCCTCATGGACCTGGATGTGG...CGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCCCACCAGGCGGCCGCTaGTGCCGAAGTCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPPPGGR*CRSRRA
Trigger: AGCTCTGCGACTTCGGCATCAGCGGCCGCCTGGTGG...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTAATGAACAGCGACTCTaGTCGCGGCCTGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSNEQRL*SRPAVF
Trigger: GAAGACAGCAGGCCGCGATCAGAGTCGCTGTTCATT...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GGAAGAGGAACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCCCAGAGGCTGCGGCTaGATGAACAGCGACTCTGAT +
Preference number: 4 (lower is better)
Translates to: GRGTGAWEWRRTQHAGSVPRGCG*MNSDSD
Trigger: ATCAGAGTCGCTGTTCATTCAGCCGCAGCCTCTGGG...CACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGCTGGCTGGGGGCCACTaGCTCATTGCGCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTLAGGH*LIAPWE
Trigger: CTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCAG...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTCACATCCACTCCCTCTaGCCTCCATCCCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSHIHSL*PPSLTP
Trigger: GGGAGTCAGGGATGGAGGGCAGAGGGAGTGGATGTG...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATGTGAGAGGAGAGGGATaGTACGCCTACGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDVRGEG*YAYAAP
Trigger: GGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCAC...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCAGGCTGCCCCCATCGTTaGCCAGCGGGAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: DPLRSKRERERERERERAGCPHR*PAGAAG
Trigger: CCCTGCAGCTCCCGCTGGCCAACGATGGGGGCAGCC...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCCGCATCTTCCACACCTaGCCGCAGGTGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPRIFHT*PQVPLP
Trigger: GGGCAGCGGCACCTGCGGCCAGGTGTGGAAGATGCG...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCATTAACGGCAATGACGTaGCCGGTCTTCCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: HAPRPPSLKAILCGQGPALTAMT*PVFRKR
Trigger: GCGCTTCCGGAAGACCGGCCACGTCATTGCCGTTAA...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATGAATGCGCTCGGGGATaGGGCCCTGCATCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDECARG*GPASAS
Trigger: AGAAGCGGATGCAGGGCCCCATCCCCGAGCGCATTC...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGTCCGCGTCTTGGCTTTaGAGTCCACCAGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTSASWL*SPPGGR
Trigger: GCGGCCGCCTGGTGGACTCCAAAGCCAAGACGCGGA...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGCGGCTTGGTGGGGTCTaGGGGGTCAATGCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLRLGGV*GVNALG
Trigger: CCCGAGCGCATTGACCCCCCAGACCCCACCAAGCCG...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGGTCCTCAGTCCTAGGTaGCCGTCCAGGTCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGVLSPR*PSRSQV
Trigger: GACCTGGGACCTGGACGGCCACCTAGGACTGAGGAC...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGGCCCCCACCCCTGCTaGAGCTTGTCACACGTCCTC +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTGPHPC*SLSHVL
Trigger: GAGGACGTGTGACAAGCTCCAGCAGGGGTGGGGGCC...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGGGTGGCTTTCCTCCCTaGGGGCAGAGAGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGGGFPP*GQREDD
Trigger: GTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCAAGGGCCAGGCCTGTTaGCACCCCCACCCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPKGQAC*HPHPAD
Trigger: GTCTGCCGGGTGGGGGTGCCAACAGGCCTGGCCCTT...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATGGCCTGTGCTGGCCCTaGGACCAGCCATGCAACCTT +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDGLCWP*DQPCNL
Trigger: AAGGTTGCATGGCTGGTCCCAGGGCCAGCACAGGCC...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGCCACATCCAGGTCCATaGGGATGCGCTTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGPHPGP*GCACSP
Trigger: AGGAGAACAAGCGCATCCTCATGGACCTGGATGTGG...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCAAATGAACAGCGACTCTaGTCGCGGCCTGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: HAPRPPSLKAILCGQGPANEQRL*SRPAVF
Trigger: GAAGACAGCAGGCCGCGATCAGAGTCGCTGTTCATT...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTCCCAGAGGCTGCGGCTaGATGAACAGCGACTCTGAT +
Preference number: 4 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSPRGCG*MNSDSD
Trigger: ATCAGAGTCGCTGTTCATTCAGCCGCAGCCTCTGGG...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCCCAAAAAGGACCCCCTaGGATCAAAGAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAPKRTP*DQRERE
Trigger: CTCTCTCTCTCTTTGATCTCAGGGGGTCCTTTTTGG...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTGCCTCCCGGTTCTCCTaGTTCAGCTTTGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSASRFS*FSFASR
Trigger: CCTGGAAGCAAAGCTGAAGCAGGAGAACCGGGAGGC...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGCAGGTCGTTGATTTCTaGCTGGTAGCGCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGQVVDF*LVALAP
Trigger: GGGGGCCAGCGCTACCAGGCAGAAATCAACGACCTG...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGGGCCGCAGGTGCCGCTaGCCATCTCGCCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLGRRCR*PSRPSS
Trigger: AGAACTTGGGCGAGATGGGCAGCGGCACCTGCGGCC...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGACTCTGATCGCGGCCTaGTGTCTTCCGTTCACAGTG +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGTLIAA*CLPFTV
Trigger: CACTGTGAACGGAAGACAGCAGGCCGCGATCAGAGT...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACACCCGGTCCGCCCTCTaGCTGGTCCAGAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHTRSAL*LVQRDG
Trigger: GCCATCCCTCTGGACCAGGCAGAGGGCGGACCGGGT...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGGCTCCACCAACGAGATaGCCAGGCTCCATACGTCGG +
Preference number: 4 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVAPPTR*PGSIRR
Trigger: CCGACGTATGGAGCCTGGGCATCTCGTTGGTGGAGC...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397979.4
ENST00000397983.7
CDS-3UTR CCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGTCGCAGAGCTTGATCTaGCCCCGCTCGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTSQSLI*PRSSSR
Trigger: CCTGCTGGACGAGCGGGGCCAGATCAAGCTCTGCGA...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCCTGAAGAAGGGCAGGTaGGGCTGGCTCAGGACGCCG +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPLKKGR*GWLRTP
Trigger: CGGCGTCCTGAGCCAGCCCCACCTGCCCTTCTTCAG...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGAAGGACACAGCACGCTaGGAGCGTGCATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVKDTAR*ERAWWL
Trigger: CAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTT...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGAGAGGAACGGGCGCGTaGGAGTGGCGAAGGACACAG +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTRGTGA*EWRRTQ
Trigger: CTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCT...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGAATGCCCACACTGCCTaGCTGGGGGCCACTGACTCA +
Preference number: 4 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGNAHTA*LGATDS
Trigger: TGAGTCAGTGGCCCCCAGCCAGGCAGTGTGGGCATT...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCGGCCCCCACCCCTGCTaGAGCTTGTCACACGTCCTC +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPGPHPC*SLSHVL
Trigger: GAGGACGTGTGACAAGCTCCAGCAGGGGTGGGGGCC...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCACCAGGTGTGGGTGAGTaGAGGGACGGCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: DPLRSKRERERERERERAPGVGE*RDGQGH
Trigger: GTGCCCCTGGCCGTCCCTCCACTCACCCACACCTGG...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGTCCTGGACCTCAACGTaGACTGGGCCAGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVSWTST*TGPGVG
Trigger: ACCCACACCTGGCCCAGTCCACGTTGAGGTCCAGGA...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATGGTCCTTCCCAGTCCTaGACCTCAACGTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDGPSQS*TSTWTG
Trigger: CCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACC...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCCGAAGTCGCAGAGCTTaGTCTGGCCCCGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPRSRRA*SGPARP
Trigger: TGGACGAGCGGGGCCAGATCAAGCTCTGCGACTTCG...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGCCTGTAGGACTTTGGTaGGGACCTCAAAGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGPVGLW*GPQSPS
Trigger: AGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGG...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATGCCTCCCGGTTCTCCTaGTTCAGCTTTGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDASRFS*FSFASR
Trigger: CCTGGAAGCAAAGCTGAAGCAGGAGAACCGGGAGGC...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGCAGGTCGTTGATTTCTaGCTGGTAGCGCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTQVVDF*LVALAP
Trigger: GGGGGCCAGCGCTACCAGGCAGAAATCAACGACCTG...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGTCATCTTGCCCAGAATaGGCTCGGGGATGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTSSCPE*ARGWGP
Trigger: AGGGCCCCATCCCCGAGCGCATTCTGGGCAAGATGA...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCAAAGGGCAGGTGGGGCTaGCTCAGGACGCCGCTAGTC +
Preference number: 4 (lower is better)
Translates to: DPLRSKRERERERERERAKGRWG*LRTPLV
Trigger: GACTAGCGGCGTCCTGAGCCAGCCCCACCTGCCCTT...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCAACGGGCGCGTGGGAGTaGCGAAGGACACAGCACGCT +
Preference number: 4 (lower is better)
Translates to: DPLRSKRERERERERERATGAWE*RRTQHA
Trigger: AGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGT...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCACCCGTCCAGCCGCAGTaGCAATGCCCACACTGCCTG +
Preference number: 4 (lower is better)
Translates to: DPLRSKRERERERERERAPVQPQ*QCPHCL
Trigger: CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGG...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCAGTGCCCGAGGGCGGTTaGGGCCCCACCACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPVPEGG*GPTTSS
Trigger: GCTGCTTGTGGTGGGGCCCCAACCGCCCTCGGGCAC...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGTCCTGGACCTCAACGTaGACTGGGCCAGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTSWTST*TGPGVG
Trigger: ACCCACACCTGGCCCAGTCCACGTTGAGGTCCAGGA...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCCGGCTTCTGCGCCTTTaGTGTTGGATTTTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCARLLRL*CWIFFV
Trigger: CACAAAGAAAATCCAACACCAAAGGCGCAGAAGCCG...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGCGGCTTCTGCGCCTTTaGTGTTGGATTTTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLRLLRL*CWIFFV
Trigger: CACAAAGAAAATCCAACACCAAAGGCGCAGAAGCCG...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCAGAGGCCCCCATGGCTaGATGCAGGGGAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPRGPHG*MQGRKG
Trigger: CCCTTTCCTCCCCTGCATCCAGCCATGGGGGCCTCT...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGTCGCAGAGGCCCCCATaGCTGGATGCAGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLSQRPP*LDAGEE
Trigger: TTCCTCCCCTGCATCCAGCCATGGGGGCCTCTGCGA...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCGGCCTGTGCTGGCCCTaGGACCAGCCATGCAACCTT +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPGLCWP*DQPCNL
Trigger: AAGGTTGCATGGCTGGTCCCAGGGCCAGCACAGGCC...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACCGAAGTCGCAGAGCTTaGTCTGGCCCCGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHRSRRA*SGPARP
Trigger: TGGACGAGCGGGGCCAGATCAAGCTCTGCGACTTCG...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCATCTGCCCTCCATCCCTaGCTCCCTCCGGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPSALHP*LPPDPS
Trigger: GGAGGGGTCCGGAGGGAGTCAGGGATGGAGGGCAGA...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCTCCCGGTTCTCCTaGTTCAGCTTTGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTASRFS*FSFASR
Trigger: CCTGGAAGCAAAGCTGAAGCAGGAGAACCGGGAGGC...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCCTCAAAGTCCGTCTTaGAGTTCTTGTAGGGAAACT +
Preference number: 4 (lower is better)
Translates to: ERARARSPVQPQWQCPHCPQSPS*SSCRET
Trigger: AGTTTCCCTACAAGAACTGCAAGACGGACTTTGAGG...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCCCTCAAAGTCCGTCTTaGAGTTCTTGTAGGGAAACT +
Preference number: 4 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAPQSPS*SSCRET
Trigger: AGTTTCCCTACAAGAACTGCAAGACGGACTTTGAGG...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCGGCCCCCACCCCTaGTGGAGCTTGTCACACGTC +
Preference number: 4 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPPGPHP*WSLSHV
Trigger: GACGTGTGACAAGCTCCAGCAGGGGTGGGGGCCGGG...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCCCCTGGGACCAGCCATaGAACCTTCCGGCAATCGCA +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPPWDQP*NLPAIA
Trigger: TGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGGG...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGCCCTGGGACCAGCCATaGAACCTTCCGGCAATCGCA +
Preference number: 4 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLPWDQP*NLPAIA
Trigger: TGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGGG...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACTCGCAGAGCTTGATCTaGCCCCGCTCGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHSQSLI*PRSSSR
Trigger: CCTGCTGGACGAGCGGGGCCAGATCAAGCTCTGCGA...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACAGAGGCCCCCATGGCTaGATGCAGGGGAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHRGPHG*MQGRKG
Trigger: CCCTTTCCTCCCCTGCATCCAGCCATGGGGGCCTCT...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACATGGGCCTGGGCCGCTaGGGGCTGATATCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHMGLGR*GLISRL
Trigger: CAACCTGGATATCAGCCCCCAGCGGCCCAGGCCCAT...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397983.7
CDS-3UTR TCA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGAGTTCTCCAGGTCGTTaGTTTCTGCCTGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGSSPGR*FLPGSA
Trigger: AGCGCTACCAGGCAGAAATCAACGACCTGGAGAACT...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGCCACATCCAGGTCCATaGGGATGCGCTTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTPHPGP*GCACSP
Trigger: AGGAGAACAAGCGCATCCTCATGGACCTGGATGTGG...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCACCTGCATCCGCTTCTTaGGCTTCTCAGCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: DPLRSKRERERERERERAPASAS*ASQRRC
Trigger: GCACCTGCGCTGAGAAGCTCAAGAAGCGGATGCAGG...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGCCTGTAGGACTTTGGTaGGGACCTCAAAGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGPVGLW*GPQSPS
Trigger: AGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGG...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGTTTGGTCTCTTCCTGTaGTCTTTAGTAAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLFGLFL*SLVRQS
Trigger: AGACTGCCTTACTAAAGATCACAGGAAGAGACCAAA...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGAATGAACAGCGACTCTaGTCGCGGCCTGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTNEQRL*SRPAVF
Trigger: GAAGACAGCAGGCCGCGATCAGAGTCGCTGTTCATT...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACCCCTGGGACCAGCCATaGAACCTTCCGGCAATCGCA +
Preference number: 4 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHPWDQP*NLPAIA
Trigger: TGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGGG...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCAGTGGGCCTGGGCCGCTaGGGGCTGATATCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPVGLGR*GLISRL
Trigger: CAACCTGGATATCAGCCCCCAGCGGCCCAGGCCCAC...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397979.4
ENST00000397981.7
CDS-3UTR CCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCAGGCTTGACGTCGCGGTaGATGACACCGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DPLRSKRERERERERERAGLTSR*MTPCFS
Trigger: GGAGAAGCACGGTGTCATCCACCGCGACGTCAAGCC...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCAAAGGACACAGCACGCTaGGAGCGTGCATGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DPLRSKRERERERERERAKDTAR*ERAWWL
Trigger: CAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTT...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GGAAGAGGAACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCGGCTTCTGCGCCTTTaGTGTTGGATTTTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: GRGTGAWEWRRTQHAGSVRLLRL*CWIFFV
Trigger: CACAAAGAAAATCCAACACCAAAGGCGCAGAAGCCG...CACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCAAGGGGCAAGAGAAGGTaGCTTTCCTCCCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: DPLRSKRERERERERERARGKRR*LSSLGA
Trigger: TGCCCCCAGGGAGGAAAGCCACCTTCTCTTGCCCCT...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACGCCAAGCAGCTACCTaGAGAAGGGCAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPRQAAT*RRAGGA
Trigger: AGCCCCACCTGCCCTTCTTCAGGTAGCTGCTTGGCG...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCATTTGGTAAAAGTTTCTaGAGGTACCGACAACCCCAC +
Preference number: 4 (lower is better)
Translates to: HAPRPPSLKAILCGQGPAFGKSF*RYRQPH
Trigger: GTGGGGTTGTCGGTACCTTCAGAAACTTTTACCAAA...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTTTTTTCTTGTCCACTTaGTTTGCATGCAACACCCAC +
Preference number: 4 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPAFFLST*FACNTH
Trigger: GTGGGTGTTGCATGCAAATCAAGTGGACAAGAAAAA...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGCTCCTGCTTCAGCTTTaGTTCCAGGCGGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLLLLQL*FQAGQL
Trigger: AAGCTGTCCCGCCTGGAAGCAAAGCTGAAGCAGGAG...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGCTTGTCCACTTGATTTaGATGCAACACCCACAAAAA +
Preference number: 4 (lower is better)
Translates to: RARARSPVQPQWQCPHCLLVHLI*MQHPQK
Trigger: TTTTTGTGGGTGTTGCATGCAAATCAAGTGGACAAG...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACCGGCCAGCCGGCTTCTaGGCCTTTGGTGTTGGATTT +
Preference number: 4 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHRPAGF*AFGVGF
Trigger: AAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCG...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGGGAAACTGTCCTGTTaGCAGCTCCACCAACGAGAT +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTGKLSC*QLHQRD
Trigger: ATCTCGTTGGTGGAGCTGGCAACAGGACAGTTTCCC...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397979.4
ENST00000397983.7
CDS-3UTR CCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTCGGCTTGGTGGGGTCTaGGGGGTCAATGCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTRLGGV*GVNALG
Trigger: CCCGAGCGCATTGACCCCCCAGACCCCACCAAGCCG...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTCCGTCAGGAGGTGGCTaGGCCCAGGCTCAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTPSGGG*AQAQAR
Trigger: TCTGGCCTGAGCCTGGGCCCAGCCACCTCCTGACGG...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCAGGTGGCTTTCCTCCCTaGGGGCAGAGAGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: DPLRSKRERERERERERAGGFPP*GQREDD
Trigger: GTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACCTCCTGCTTCAGCTTTaGTTCCAGGCGGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHLLLQL*FQAGQL
Trigger: AAGCTGTCCCGCCTGGAAGCAAAGCTGAAGCAGGAG...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCATCATCTTGCCCAGAATaGGCTCGGGGATGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPSSCPE*ARGWGP
Trigger: AGGGCCCCATCCCCGAGCGCATTCTGGGCAAGATGA...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTAGCACGCTGGGAGCGTaGATGGTGGCTGCGGGACTC +
Preference number: 4 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTSTLGA*MVAAGL
Trigger: GAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCT...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGGGGAAACTGTCCTGTTaGCAGCTCCACCAACGAGAT +
Preference number: 4 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLGKLSC*QLHQRD
Trigger: ATCTCGTTGGTGGAGCTGGCAACAGGACAGTTTCCC...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397979.4
ENST00000397983.7
CDS-3UTR CCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATATCTCCTGCAGCTTCTaGTCAATCTCAATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDISCSF*SISMLS
Trigger: GGAGAGCATTGAGATTGACCAGAAGCTGCAGGAGAT...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACGTGCCCGAGGGCGGTTaGGGCCCCACCACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNVPEGG*GPTTSS
Trigger: GCTGCTTGTGGTGGGGCCCCAACCGCCCTCGGGCAC...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCAAGGGGCAAGAGAAGGTaGCTTTCCTCCCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPRGKRR*LSSLGA
Trigger: TGCCCCCAGGGAGGAAAGCCACCTTCTCTTGCCCCT...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACAGTTCTCCAGGTCGTTaGTTTCTGCCTGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHSSPGR*FLPGSA
Trigger: AGCGCTACCAGGCAGAAATCAACGACCTGGAGAACT...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTTTTGGTCTCTTCCTGTaGTCTTTAGTAAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSFGLFL*SLVRQS
Trigger: AGACTGCCTTACTAAAGATCACAGGAAGAGACCAAA...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTGCCGCTAGTCCGCGGTaGCTCAGTCTTCGCCATGAC +
Preference number: 4 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTAASPR*LSLRHD
Trigger: GTCATGGCGAAGACTGAGTCACCGCGGACTAGCGGC...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTCGCCAAGCAGCTACCTaGAGAAGGGCAGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTRQAAT*RRAGGA
Trigger: AGCCCCACCTGCCCTTCTTCAGGTAGCTGCTTGGCG...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGTTTGGTAAAAGTTTCTaGAGGTACCGACAACCCCAC +
Preference number: 4 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVFGKSF*RYRQPH
Trigger: GTGGGGTTGTCGGTACCTTCAGAAACTTTTACCAAA...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTCAAGACCACCTTCCCTaGAGGCCATCCTGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTQDHLP*RPSCAA
Trigger: GGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTG...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACAGGATGGCGAGCGGCTaGCCCCATCGTTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNRMASG*PHRWPA
Trigger: CGCTGGCCAACGATGGGGGCAGCCGCTCGCCATCCT...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CCTGGGACCAGCCATGCAACCTTCCGGCAATCGCAGAGGCCCCCATGGCTGGATTGCTTCATGATCTCCTaGAGCTTCTGGTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: PGTSHATFRQSQRPPWLDCFMIS*SFWSIS
Trigger: TGAGATTGACCAGAAGCTGCAGGAGATCATGAAGCA...ATCCAGCCATGGGGGCCTCTGCGATTGCCGGAAGGTTGCATGGCTGGTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACACACCTGGCCGCAGGTaGCGCTGCCCATCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNTPGRR*RCPSRP
Trigger: TGGGCGAGATGGGCAGCGGCACCTGCGGCCAGGTGT...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTGGCAGGGCAACGAGATaGCCAGGCTCCATACGTCGG +
Preference number: 4 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTGRATR*PGSIRR
Trigger: CCGACGTATGGAGCCTGGGCATCTCGTTGCCCTGCC...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397981.7
CDS-3UTR CCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTGGCCTGTGCTGGCCCTaGGACCAGCCATGCAACCTT +
Preference number: 4 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTGLCWP*DQPCNL
Trigger: AAGGTTGCATGGCTGGTCCCAGGGCCAGCACAGGCC...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGTTTGGTCTCTTCCTGTaGTCTTTAGTAAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGFGLFL*SLVRQS
Trigger: AGACTGCCTTACTAAAGATCACAGGAAGAGACCAAA...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACCCAAAAAGGACCCCCTaGGATCAAAGAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHPKRTP*DQRERE
Trigger: CTCTCTCTCTCTTTGATCTCAGGGGGTCCTTTTTGG...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGTTTTTCTTGTCCACTTaGTTTGCATGCAACACCCAC +
Preference number: 4 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGFFLST*FACNTH
Trigger: GTGGGTGTTGCATGCAAATCAAGTGGACAAGAAAAA...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGTGCTTCATGATCTCCTaGAGCTTCTGGTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTCFMIS*SFWSIS
Trigger: TGAGATTGACCAGAAGCTGCAGGAGATCATGAAGCA...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACGGCCGCAGGTGCCGCTaGCCATCTCGCCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNGRRCR*PSRPSS
Trigger: AGAACTTGGGCGAGATGGGCAGCGGCACCTGCGGCC...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACCGGCGCTCCGCGTCTTaGCTTTGGAGTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNRRSAS*LWSPPG
Trigger: GCCTGGTGGACTCCAAAGCCAAGACGCGGAGCGCCG...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCTGTAGGACTTTGGTaGGGACCTCAAAGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPPVGLW*GPQSPS
Trigger: AGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGG...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCTTTGGTAAAAGTTTCTaGAGGTACCGACAACCCCAC +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPFGKSF*RYRQPH
Trigger: GTGGGGTTGTCGGTACCTTCAGAAACTTTTACCAAA...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCCCTCAAAGTCCGTCTTaGAGTTCTTGTAGGGAAACT +
Preference number: 4 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPPQSPS*SSCRET
Trigger: AGTTTCCCTACAAGAACTGCAAGACGGACTTTGAGG...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTCTCCTGCTTCAGCTTTaGTTCCAGGCGGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTLLLQL*FQAGQL
Trigger: AAGCTGTCCCGCCTGGAAGCAAAGCTGAAGCAGGAG...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACTCCGGTCACCTGCTCTaGACCATGCCCCAAGACCAC +
Preference number: 4 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNSGHLL*TMPQDH
Trigger: GTGGTCTTGGGGCATGGTGCAGAGCAGGTGACCGGA...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACAATGCCCACACTGCCTaGCTGGGGGCCACTGACTCA +
Preference number: 4 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNNAHTA*LGATDS
Trigger: TGAGTCAGTGGCCCCCAGCCAGGCAGTGTGGGCATT...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACTCCTGGACCTCAACGTaGACTGGGCCAGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNSWTST*TGPGVG
Trigger: ACCCACACCTGGCCCAGTCCACGTTGAGGTCCAGGA...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATTCTGCCCTCCATCCCTaGCTCCCTCCGGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNSALHP*LPPDPS
Trigger: GGAGGGGTCCGGAGGGAGTCAGGGATGGAGGGCAGA...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATAGGATGGCGAGCGGCTaGCCCCATCGTTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNRMASG*PHRWPA
Trigger: CGCTGGCCAACGATGGGGGCAGCCGCTCGCCATCCT...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACACTCTGATCGCGGCCTaGTGTCTTCCGTTCACAGTG +
Preference number: 4 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNTLIAA*CLPFTV
Trigger: CACTGTGAACGGAAGACAGCAGGCCGCGATCAGAGT...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATGCCATGGGAGACCTATaGAGACCCAGGGGACCCGTC +
Preference number: 4 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNAMGDL*RPRGPV
Trigger: GACGGGTCCCCTGGGTCTGCATAGGTCTCCCATGGC...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATTCGCAGAGCTTGATCTaGCCCCGCTCGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNSQSLI*PRSSSR
Trigger: CCTGCTGGACGAGCGGGGCCAGATCAAGCTCTGCGA...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATGTCCTCAGTCCTAGGTaGCCGTCCAGGTCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNVLSPR*PSRSQV
Trigger: GACCTGGGACCTGGACGGCCACCTAGGACTGAGGAC...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATGAGGCTGCGGCTGAATaGACAGCGACTCTGATCGCG +
Preference number: 4 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNEAAAE*TATLIA
Trigger: CGCGATCAGAGTCGCTGTTCATTCAGCCGCAGCCTC...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATCAGGTCGTTGATTTCTaGCTGGTAGCGCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNQVVDF*LVALAP
Trigger: GGGGGCCAGCGCTACCAGGCAGAAATCAACGACCTG...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACTTGTCCACTTGATTTaGATGCAACACCCACAAAAA +
Preference number: 4 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPLVHLI*MQHPQK
Trigger: TTTTTGTGGGTGTTGCATGCAAATCAAGTGGACAAG...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATTTAACGGCAATGACGTaGCCGGTCTTCCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNLTAMT*PVFRKR
Trigger: GCGCTTCCGGAAGACCGGCCACGTCATTGCCGTTAA...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATAGTTCTCCAGGTCGTTaGTTTCTGCCTGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNSSPGR*FLPGSA
Trigger: AGCGCTACCAGGCAGAAATCAACGACCTGGAGAACT...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACCTTGTCCACTTGATTTaGATGCAACACCCACAAAAA +
Preference number: 4 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNLVHLI*MQHPQK
Trigger: TTTTTGTGGGTGTTGCATGCAAATCAAGTGGACAAG...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR GCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATTGCTTCATGATCTCCTaGAGCTTCTGGTCAATCTCA +
Preference number: 4 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNCFMIS*SFWSIS
Trigger: TGAGATTGACCAGAAGCTGCAGGAGATCATGAAGCA...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR TCA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATTTTTTCTTGTCCACTTaGTTTGCATGCAACACCCAC +
Preference number: 4 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNFFLST*FACNTH
Trigger: GTGGGTGTTGCATGCAAATCAAGTGGACAAGAAAAA...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCCGGCTGCCCCCATCGTaGGCCAGCGGGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ERDATPTLPPPRPAGFCARLPPS*ASGSCR
Trigger: CCTGCAGCTCCCGCTGGCCAACGATGGGGGCAGCCG...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCCGGCTGCCCCCATCGTaGGCCAGCGGGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RERERAAPSSRSGNAHTARLPPS*ASGSCR
Trigger: CCTGCAGCTCCCGCTGGCCAACGATGGGGGCAGCCG...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCCTCCGGACCCCTCCCTaGGCCCCGCTCCGTCACCGA +
Preference number: 5 (lower is better)
Translates to: ERDATPTLPPPRPAGFCALRTPP*APLRHR
Trigger: TCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGAG...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTCGGCTGCCCCCATCGTaGGCCAGCGGGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSRLPPS*ASGSCR
Trigger: CCTGCAGCTCCCGCTGGCCAACGATGGGGGCAGCCG...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GGAAGAGGAACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCTCCGGACCCCTCCCTaGGCCCCGCTCCGTCACCGA +
Preference number: 5 (lower is better)
Translates to: GRGTGAWEWRRTQHAGSVLRTPP*APLRHR
Trigger: TCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGAG...CACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCCCGAAGTCGCAGAGCTaGATCTGGCCCCGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: RERERAAPSSRSGNAHTAPKSQS*IWPRSS
Trigger: GGACGAGCGGGGCCAGATCAAGCTCTGCGACTTCGG...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTCCGGCGCTCCGCGTCTaGGCTTTGGAGTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSPALRV*ALESTR
Trigger: CCTGGTGGACTCCAAAGCCAAGACGCGGAGCGCCGG...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTCTCCGGACCCCTCCCTaGGCCCCGCTCCGTCACCGA +
Preference number: 5 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSLRTPP*APLRHR
Trigger: TCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGAG...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTAAAGGGCCAGGCCTGTaGGCACCCCCACCCGGCAGA +
Preference number: 5 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSKGPGL*APPPGR
Trigger: TCTGCCGGGTGGGGGTGCCAACAGGCCTGGCCCTTT...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GGAAGAGGAACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCTCCGCGTCTTGGCTTaGGAGTCCACCAGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: GRGTGAWEWRRTQHAGSVLRVLA*ESTRRP
Trigger: CGGCCGCCTGGTGGACTCCAAAGCCAAGACGCGGAG...CACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GGAAGAGGAACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCCGGCGCTCCGCGTCTaGGCTTTGGAGTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: GRGTGAWEWRRTQHAGSVPALRV*ALESTR
Trigger: CCTGGTGGACTCCAAAGCCAAGACGCGGAGCGCCGG...CACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGAAAGGGCCAGGCCTGTaGGCACCCCCACCCGGCAGA +
Preference number: 5 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGKGPGL*APPPGR
Trigger: TCTGCCGGGTGGGGGTGCCAACAGGCCTGGCCCTTT...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS GCA 90 bp TCAGCGCAGGTGCCCATGAGCTCCATGGCGATGAAGACGTCCGTCTaGAGGGAGAGGGGCACCCGGGGGAGCTGTGTCTTCCGGCCCACC +
Preference number: 5 (lower is better)
Translates to: SAQVPMSSMAMKTSV*RERGTRGSCVFRPT
Trigger: GGTGGGCCGGAAGACACAGCTCCCCCGGGTGCCCCTCTCCCTGCAGACGGACGTCTTCATCGCCATGGAGCTCATGGGCACCTGCGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494348.1
CDS CCA 90 bp GCTCCATACGTCGGCCCGGATGTCATAGTCCGGCTTGGTGGGGTCTaGGGGGTCAATGCGCTCGGGTGCCATGTAGGCGGCACAGCCGGC +
Preference number: 5 (lower is better)
Translates to: APYVGPDVIVRLGGV*GVNALGCHVGGTAG
Trigger: GCCGGCTGTGCCGCCTACATGGCACCCGAGCGCATTGACCCCCCAGACCCCACCAAGCCGGACTATGACATCCGGGCCGACGTATGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
ENST00000498118.1
CDS CCA 90 bp GGCTGGCCGCCGCCAAGCAGCTACCTGAAGAAGGGCAGGTGGGGCTaGCTCAGGACGCCGCTAGTCCGCGGTGACTCAGTCTTCGCCATG +
Preference number: 5 (lower is better)
Translates to: GWPPPSSYLKKGRWG*LRTPLVRGDSVFAM
Trigger: CATGGCGAAGACTGAGTCACCGCGGACTAGCGGCGTCCTGAGCCAGCCCCACCTGCCCTTCTTCAGGTAGCTGCTTGGCGGCGGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS CCA 90 bp CTGTGGGGCTGGCCGCCGCCAAGCAGCTACCTGAAGAAGGGCAGGTaGGGCTGGCTCAGGACGCCGCTAGTCCGCGGTGACTCAGTCTTC +
Preference number: 5 (lower is better)
Translates to: LWGWPPPSSYLKKGR*GWLRTPLVRGDSVF
Trigger: GAAGACTGAGTCACCGCGGACTAGCGGCGTCCTGAGCCAGCCCCACCTGCCCTTCTTCAGGTAGCTGCTTGGCGGCGGCCAGCCCCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS-3UTR CAA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCCGCTTGTTCTCCTCCTaGTTCCCGGAGCGCCGCATT +
Preference number: 5 (lower is better)
Translates to: RERERAAPSSRSGNAHTARLFSS*FPERRI
Trigger: AATGCGGCGCTCCGGGAACAAGGAGGAGAACAAGCG...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCGCTTGTTCTCCTCCTaGTTCCCGGAGCGCCGCATT +
Preference number: 5 (lower is better)
Translates to: ERARARSPVQPQWQCPHCRLFSS*FPERRI
Trigger: AATGCGGCGCTCCGGGAACAAGGAGGAGAACAAGCG...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp AGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTGCCCTGCATCCGCTTCTaGAGCTTCTCAGCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RARARSPVQPQWQCPHCLPCIRF*SFSAQV
Trigger: CACCTGCGCTGAGAAGCTCAAGAAGCGGATGCAGGG...CAGGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GGAAGAGGAACGGGCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCCGAAGTCGCAGAGCTaGATCTGGCCCCGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: GRGTGAWEWRRTQHAGSVPKSQS*IWPRSS
Trigger: GGACGAGCGGGGCCAGATCAAGCTCTGCGACTTCGG...CACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGCCCGTTCCTCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCCCTGCATCCGCTTCTaGAGCTTCTCAGCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPAPCIRF*SFSAQV
Trigger: CACCTGCGCTGAGAAGCTCAAGAAGCGGATGCAGGG...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp TCCGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTATCGCCACTGTCATCTaGCCCAGAATGCGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SGPLPWPRSVTDSLRSPAIATVI*PRMRSG
Trigger: CCCCGAGCGCATTCTGGGCAAGATGACAGTGGCGAT...AGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGCTCCGCGTCTTGGCTTaGGAGTCCACCAGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVLRVLA*ESTRRP
Trigger: CGGCCGCCTGGTGGACTCCAAAGCCAAGACGCGGAG...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCTTCGCCATGACATCCTaGAACCAGGACGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: ERARARSPVQPQWQCPHCFAMTS*NQDATS
Trigger: GGACGTGGCGTCCTGGTTCAAGGATGTCATGGCGAA...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCTTCGCCATGACATCCTaGAACCAGGACGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: RERERAAPSSRSGNAHTAFAMTS*NQDATS
Trigger: GGACGTGGCGTCCTGGTTCAAGGATGTCATGGCGAA...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTGGGGCCACTGACTCATaGCGCCATGGGAGACCTATG +
Preference number: 5 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSGATDS*RHGRPM
Trigger: CATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCC...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGAGTGCCCGAGGGCGGTaGGGGCCCCACCACAAGCAG +
Preference number: 5 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTSARGR*GPHHKQ
Trigger: CTGCTTGTGGTGGGGCCCCAACCGCCCTCGGGCACT...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS TCA 90 bp GGGAGGGGGAGGAGGAGGGAGGACGCAGAGGAGGCTGGGCTGGGCTaGCCGCTGCTTGAGTGGAGTGAGAGAGAAAGTGAGAGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: GRGRRREDAEEAGLG*PLLEWSERESESEG
Trigger: CCCCTCACTCTCACTTTCTCTCTCACTCCACTCAAGCAGCGGTCAGCCCAGCCCAGCCTCCTCTGCGTCCTCCCTCCTCCTCCCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475022.1
CDS GCA 90 bp GAGGTCGATCCTCCGCCGGGCCTCCCGGTTCTCCTGCTTCAGCTTTaGTTCCAGGCGGGACAGCTTCTGTTCCAGGGAGGACGCCGCCAT +
Preference number: 5 (lower is better)
Translates to: EVDPPPGLPVLLLQL*FQAGQLLFQGGRRH
Trigger: ATGGCGGCGTCCTCCCTGGAACAGAAGCTGTCCCGCCTGGAAGCAAAGCTGAAGCAGGAGAACCGGGAGGCCCGGCGGAGGATCGACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
ENST00000475022.1
CDS CCA 90 bp ACGGCAATGACGTGGCCGGTCTTCCGGAAGCGCATCTTCCACACCTaGCCGCAGGTGCCGCTGCCCATCTCGCCCAAGTTCTCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: TAMTWPVFRKRIFHT*PQVPLPISPKFSRS
Trigger: CGACCTGGAGAACTTGGGCGAGATGGGCAGCGGCACCTGCGGCCAGGTGTGGAAGATGCGCTTCCGGAAGACCGGCCACGTCATTGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000465324.1
ENST00000468058.1
ENST00000494348.1
CDS-3UTR CAA 90 bp GCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGTCTCCTGCTTCAGCTTaGCTTCCAGGCGGGACAGCT +
Preference number: 5 (lower is better)
Translates to: ARGSGEGHSTLGACMVAASPASA*LPGGTA
Trigger: AGCTGTCCCGCCTGGAAGCAAAGCTGAAGCAGGAGA...CGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp CGGACCCCTCCCTTGGCCCCGCTCCGTCACCGATTCCCTCCGGTCACCTGCTCTTCTCCTGCTTCAGCTTaGCTTCCAGGCGGGACAGCT +
Preference number: 5 (lower is better)
Translates to: RTPPLAPLRHRFPPVTCSSPASA*LPGGTA
Trigger: AGCTGTCCCGCCTGGAAGCAAAGCTGAAGCAGGAGA...AGAGCAGGTGACCGGAGGGAATCGGTGACGGAGCGGGGCCAAGGGAGGGGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGATCGCCACTGTCATCTaGCCCAGAATGCGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGIATVI*PRMRSG
Trigger: CCCCGAGCGCATTCTGGGCAAGATGACAGTGGCGAT...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp TGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGGCCGGCTGACCCCGGGGGGGCCACTGACTCATaGCGCCATGGGAGACCTATG +
Preference number: 5 (lower is better)
Translates to: CLPFTVSVGGRTRPADPGGATDS*RHGRPM
Trigger: CATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCC...CCCGGGGTCAGCCGGCCGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGAGTGCCCGAGGGCGGTaGGGGCCCCACCACAAGCAG +
Preference number: 5 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLSARGR*GPHHKQ
Trigger: CTGCTTGTGGTGGGGCCCCAACCGCCCTCGGGCACT...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp AGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCAGGGAAACTGTCCTGTaGCCAGCTCCACCAACGAGA +
Preference number: 5 (lower is better)
Translates to: RERERAAPSSRSGNAHTARETVL*PAPPTR
Trigger: TCTCGTTGGTGGAGCTGGCAACAGGACAGTTTCCCT...GGCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397979.4
ENST00000397983.7
CDS GCA 90 bp GGTGCCGCTGCCCATCTCGCCCAAGTTCTCCAGGTCGTTGATTTCTaGCTGGTAGCGCTGGGAGGAGAGGGAGGGTTGGAGGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GAAAHLAQVLQVVDF*LVALGGEGGLEGPW
Trigger: CCAGGGACCCTCCAACCCTCCCTCTCCTCCCAGCGCTACCAGGCAGAAATCAACGACCTGGAGAACTTGGGCGAGATGGGCAGCGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465324.1
ENST00000468058.1
CDS-3UTR CAA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGGGGCTGATATCCAGGTaGAGGTCGATCCTCCGCCGG +
Preference number: 5 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGGLISR*RSILRR
Trigger: CCGGCGGAGGATCGACCTCAACCTGGATATCAGCCC...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCCCGGCGCTCCGCGTCTaGGCTTTGGAGTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPPALRV*ALESTR
Trigger: CCTGGTGGACTCCAAAGCCAAGACGCGGAGCGCCGG...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS TCA 90 bp GAAGAAGGGCAGGTGGGGCTGGCTCAGGACGCCGCTAGTCCGCGGTaGCTCAGTCTTCGCCATGACATCCTTGAACCAGGACGCCACGTC +
Preference number: 5 (lower is better)
Translates to: EEGQVGLAQDAASPR*LSLRHDILEPGRHV
Trigger: GACGTGGCGTCCTGGTTCAAGGATGTCATGGCGAAGACTGAGTCACCGCGGACTAGCGGCGTCCTGAGCCAGCCCCACCTGCCCTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS-3UTR CAA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCATCCATGAGGATGCGCTaGTTCTCCTCCTTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: HAPRPPSLKAILCGQGPASMRMR*FSSLFP
Trigger: CGGGAACAAGGAGGAGAACAAGCGCATCCTCATGGA...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGATCGCCACTGTCATCTaGCCCAGAATGCGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVIATVI*PRMRSG
Trigger: CCCCGAGCGCATTCTGGGCAAGATGACAGTGGCGAT...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCCCGAAGTCGCAGAGCTaGATCTGGCCCCGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPPKSQS*IWPRSS
Trigger: GGACGAGCGGGGCCAGATCAAGCTCTGCGACTTCGG...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACCTCCGCGTCTTGGCTTaGGAGTCCACCAGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHLRVLA*ESTRRP
Trigger: CGGCCGCCTGGTGGACTCCAAAGCCAAGACGCGGAG...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp TGGCTGGGGGCCACTGACTCATTGCGCCATGGGAGACCTATGCAGACCCAGGGGCACCCCTGCTGGAGCTaGTCACACGTCCTCAAACCC +
Preference number: 5 (lower is better)
Translates to: WLGATDSLRHGRPMQTQGHPCWS*SHVLKP
Trigger: GGGTTTGAGGACGTGTGACAAGCTCCAGCAGGGGTG...CCCCTGGGTCTGCATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCCCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GAGAGAGCGCGAGCGCGCAGCCCCGTCCAGCCGCAGTGGCAATGCCCACACTGCCCGGCTTCTGCGCCTTaGGTGTTGGATTTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: ERARARSPVQPQWQCPHCPASAP*VLDFLC
Trigger: ACAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGG...GCAGTGTGGGCATTGCCACTGCGGCTGGACGGGGCTGCGCGCTCGCGCTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS GCA 90 bp ATCGCCACTGTCATCTTGCCCAGAATGCGCTCGGGGATGGGGCCCTaGATCCGCTTCTTGAGCTTCTCAGCGCAGGTGCCCATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: IATVILPRMRSGMGP*IRFLSFSAQVPMSS
Trigger: GGAGCTCATGGGCACCTGCGCTGAGAAGCTCAAGAAGCGGATGCAGGGCCCCATCCCCGAGCGCATTCTGGGCAAGATGACAGTGGCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
ENST00000494348.1
CDS CCA 90 bp AGTAAGGGAGGGGGAGGAGGAGGGAGGACGCAGAGGAGGCTGGGCTaGGCTGACCGCTGCTTGAGTGGAGTGAGAGAGAAAGTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: SKGGGGGGRTQRRLG*ADRCLSGVREKVRV
Trigger: CACTCTCACTTTCTCTCTCACTCCACTCAAGCAGCGGTCAGCCCAGCCCAGCCTCCTCTGCGTCCTCCCTCCTCCTCCCCCTCCCTTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475022.1
CDS-3UTR CAA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGTCTCCTGCTTCAGCTTaGCTTCCAGGCGGGACAGCT +
Preference number: 5 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVSPASA*LPGGTA
Trigger: AGCTGTCCCGCCTGGAAGCAAAGCTGAAGCAGGAGA...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS GCA 90 bp ATATCCAGGTTGAGGTCGATCCTCCGCCGGGCCTCCCGGTTCTCCTaGTTCAGCTTTGCTTCCAGGCGGGACAGCTTCTGTTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ISRLRSILRRASRFS*FSFASRRDSFCSRE
Trigger: CTCCCTGGAACAGAAGCTGTCCCGCCTGGAAGCAAAGCTGAAGCAGGAGAACCGGGAGGCCCGGCGGAGGATCGACCTCAACCTGGATAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
ENST00000475022.1
CDS CCA 90 bp AGAGGCTTTGTTCAATTCCCACCGTCTCCAGAGGTTCCCCCAGGCTaGCCCCCTGCAGGGCCGCTCACCCAGCTAGAATGTTCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: RGFVQFPPSPEVPPG*PPAGPLTQLECSLW
Trigger: CCAGAGAGAACATTCTAGCTGGGTGAGCGGCCCTGCAGGGGGCCAGCCTGGGGGAACCTCTGGAGACGGTGGGAATTGAACAAAGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475022.1
CDS-3UTR CAA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCAGGGCTGATATCCAGGTaGAGGTCGATCCTCCGCCGG +
Preference number: 5 (lower is better)
Translates to: DPLRSKRERERERERERAGLISR*RSILRR
Trigger: CCGGCGGAGGATCGACCTCAACCTGGATATCAGCCC...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp CATGCCCCAAGACCACCTTCCCTGAAGGCCATCCTGTGCGGCCAGGGCCCCGCAATGAAGACGTCCGTGTaGGTGATGAACGTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: HAPRPPSLKAILCGQGPAMKTSV*VMNVPK
Trigger: CTTTGGGACGTTCATCACCAACACGGACGTCTTCAT...TGCGGGGCCCTGGCCGCACAGGATGGCCTTCAGGGAAGGTGGTCTTGGGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCAGGGAAACTGTCCTGTaGCCAGCTCCACCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPRETVL*PAPPGR
Trigger: CCTCCCAGGTGGAGCTGGCAACAGGACAGTTTCCCT...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397981.7
CDS-3UTR CAA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCAAAAGGGCCAGGCCTGTaGGCACCCCCACCCGGCAGA +
Preference number: 5 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPKGPGL*APPPGR
Trigger: TCTGCCGGGTGGGGGTGCCAACAGGCCTGGCCCTTT...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGTCCATGAGGATGCGCTaGTTCTCCTCCTTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTSMRMR*FSSLFP
Trigger: CGGGAACAAGGAGGAGAACAAGCGCATCCTCATGGA...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTCTTGTCCACTTGATTaGCATGCAACACCCACAAAA +
Preference number: 5 (lower is better)
Translates to: ERDATPTLPPPRPAGFCASCPLD*HATPTK
Trigger: TTTTGTGGGTGTTGCATGCAAATCAAGTGGACAAGA...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS TCA 90 bp CCTGGTAGCGCTGGCCCCCGATGGTCAGGTAGCCCGTCTGCTTCATaGTCTCCTGCAGCTTCTGGTCAATCTCAATGCTCTCCATGCTGC +
Preference number: 5 (lower is better)
Translates to: PGSAGPRWSGSPSAS*SPAASGQSQCSPCC
Trigger: GCAGCATGGAGAGCATTGAGATTGACCAGAAGCTGCAGGAGATCATGAAGCAGACGGGCTACCTGACCATCGGGGGCCAGCGCTACCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS TCA 90 bp CGATGTAGGGGCAGTCGTGGCTCTTCAGCACCACATCCAGGTCCATaGGGATGCGCTTGTTCTCCTCCTTGTTCCCGGAGCGCCGCATTT +
Preference number: 5 (lower is better)
Translates to: RCRGSRGSSAPHPGP*GCACSPPCSRSAAF
Trigger: AAATGCGGCGCTCCGGGAACAAGGAGGAGAACAAGCGCATCCTCATGGACCTGGATGTGGTGCTGAAGAGCCACGACTGCCCCTACATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000465324.1
ENST00000468058.1
ENST00000494348.1
CDS GCA 90 bp GACCTCAAAGTCCGTCTTGCAGTTCTTGTAGGGAAACTGTCCTGTTaGCAGCTCCACCTGGGAGGGAGACGGGCAGGGCAACGAGATGCC +
Preference number: 5 (lower is better)
Translates to: DLKVRLAVLVGKLSC*QLHLGGRRAGQRDA
Trigger: GGCATCTCGTTGCCCTGCCCGTCTCCCTCCCAGGTGGAGCTGGCAACAGGACAGTTTCCCTACAAGAACTGCAAGACGGACTTTGAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397981.7
CDS-3UTR CAA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGTCTTCCTGTAGGACTTaGGTGAGGACCTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVSSCRT*VRTSKS
Trigger: GGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGA...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTTTAGTAAGGCAGTCTTaGACGAAGGACTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSLVRQS*TKDWKS
Trigger: GGACTTCCAGTCCTTCGTCAAAGACTGCCTTACTAA...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGATGAAGACGTCCGTGTaGGTGATGAACGTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTMKTSV*VMNVPK
Trigger: CTTTGGGACGTTCATCACCAACACGGACGTCTTCAT...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp CACTCACCCGGTCCTTCCCAGTCCTGGACCTCAACGTGGACTGGGCCAGGTGTGTTAGTAAGGCAGTCTTaGACGAAGGACTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: HSPGPSQSWTSTWTGPGVLVRQS*TKDWKS
Trigger: GGACTTCCAGTCCTTCGTCAAAGACTGCCTTACTAA...CACACCTGGCCCAGTCCACGTTGAGGTCCAGGACTGGGAAGGACCGGGTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GAGAGGGATGCTACGCCTACGCTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCGTAGCTTATTATACTTaGGTCTCTTCCTGTGATCTT +
Preference number: 5 (lower is better)
Translates to: ERDATPTLPPPRPAGFCAVAYYT*VSSCDL
Trigger: AAGATCACAGGAAGAGACCAAAGTATAATAAGCTAC...GGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAGCGTAGGCGTAGCATCCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCAGGGGCCACTGACTCATaGCGCCATGGGAGACCTATG +
Preference number: 5 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPGATDS*RHGRPM
Trigger: CATAGGTCTCCCATGGCGCAATGAGTCAGTGGCCCC...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS TCA 90 bp AAGGTGGTACCTGGCCCCCGATGGTCAGGTAGCCCGTCTGCTTCATaGTCTCCTGCAGCTTCTGGTCAATCTCAATGCTCTCCATGCTGC +
Preference number: 5 (lower is better)
Translates to: KVVPGPRWSGSPSAS*SPAASGQSQCSPCC
Trigger: GCAGCATGGAGAGCATTGAGATTGACCAGAAGCTGCAGGAGATCATGAAGCAGACGGGCTACCTGACCATCGGGGGCCAGGTACCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468058.1
CDS-3UTR CAA 90 bp GTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCCTCTTCCTGTAGGACTTaGGTGAGGACCTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: VSEGTDNPTRTSSPPPPPSSCRT*VRTSKS
Trigger: GGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGA...GGGTGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp CTGCCCCCACCACGGCCAGCCGGCTTCTGCGCCTTTGGTGTTGGATTTTCTTTGTCTTCCTGTAGGACTTaGGTGAGGACCTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: LPPPRPAGFCAFGVGFSLSSCRT*VRTSKS
Trigger: GGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGA...CAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp TCTGATCGCGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGGACGCACACGTTAGTAAGGCAGTCTTaGACGAAGGACTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: SDRGLLSSVHSVCRGTHTLVRQS*TKDWKS
Trigger: GGACTTCCAGTCCTTCGTCAAAGACTGCCTTACTAA...CGTGTGCGTCCCCCGACAGACACTGTGAACGGAAGACAGCAGGCCGCGATCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GCGCGTGGGAGTGGCGAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGTAGCTTATTATACTTaGGTCTCTTCCTGTGATCTT +
Preference number: 5 (lower is better)
Translates to: ARGSGEGHSTLGACMVAAVAYYT*VSSCDL
Trigger: AAGATCACAGGAAGAGACCAAAGTATAATAAGCTAC...CGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTCGCCACTCCCACGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCATTCGCCATGACATCCTaGAACCAGGACGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPFAMTS*NQDATS
Trigger: GGACGTGGCGTCCTGGTTCAAGGATGTCATGGCGAA...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GAAGGACACAGCACGCTGGGAGCGTGCATGGTGGCTGCGGGACTCCAGGGCTCTTCTTGTCCACTTGATTaGCATGCAACACCCACAAAA +
Preference number: 5 (lower is better)
Translates to: EGHSTLGACMVAAGLQGSSCPLD*HATPTK
Trigger: TTTTGTGGGTGTTGCATGCAAATCAAGTGGACAAGA...AGAGCCCTGGAGTCCCGCAGCCACCATGCACGCTCCCAGCGTGCTGTGTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS TCA 90 bp CCATGTGTCCGGGCAGAAGCGGGGGCTCTTCCTGTAGGACTTTGGTaGGGACCTCAAAGTCCGTCTTGCAGTTCTTGTAGGGAAACTGTC +
Preference number: 5 (lower is better)
Translates to: PCVRAEAGALPVGLW*GPQSPSCSSCRETV
Trigger: GACAGTTTCCCTACAAGAACTGCAAGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGAGCCCCCGCTTCTGCCCGGACACATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS CCA 90 bp GCAGATGTCCAAGCAGCGATGATAAAAAGGCTGGTACCTGCTCGTTaGGACGGGGCAGGAGCAGGGCTTAGAGTGATCACAATAACTCAG +
Preference number: 5 (lower is better)
Translates to: ADVQAAMIKRLVPAR*DGAGAGLRVITITQ
Trigger: CTGAGTTATTGTGATCACTCTAAGCCCTGCTCCTGCCCCGTCCCAACGAGCAGGTACCAGCCTTTTTATCATCGCTGCTTGGACATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475022.1
CDS-3UTR CAA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCAATGAAGACGTCCGTGTaGGTGATGAACGTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPMKTSV*VMNVPK
Trigger: CTTTGGGACGTTCATCACCAACACGGACGTCTTCAT...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GGGCAGAGAGAAGATGACATCTATGACTTTTTAAACATGCGGCGTTTTGTGAATAGTGCCCGAGGGCGGTaGGGGCCCCACCACAAGCAG +
Preference number: 5 (lower is better)
Translates to: GQREDDIYDFLNMRRFVNSARGR*GPHHKQ
Trigger: CTGCTTGTGGTGGGGCCCCAACCGCCCTCGGGCACT...ATTCACAAAACGCCGCATGTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTTTTTAAACCACCCCTGCTGGAGCTaGTCACACGTCCTCAAACCC +
Preference number: 5 (lower is better)
Translates to: GGFPPWGQREDDIYDFLNHPCWS*SHVLKP
Trigger: GGGTTTGAGGACGTGTGACAAGCTCCAGCAGGGGTG...GTTTAAAAAGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp AAAGTTTCTGAAGGTACCGACAACCCCACGAGAACAAGCTCTCCTCCGCCCCCACCGGCTTCTGCGCCTTaGGTGTTGGATTTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: KVSEGTDNPTRTSSPPPPPASAP*VLDFLC
Trigger: ACAAAGAAAATCCAACACCAAAGGCGCAGAAGCCGG...TGGGGGCGGAGGAGAGCTTGTTCTCGTGGGGTTGTCGGTACCTTCAGAAACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp CAAGAGAAGGTGGCTTTCCTCCCTGGGGGCAGAGAGAAGATGACATCTATGACTAGGGAAACTGTCCTGTaGCCAGCTCCACCAACGAGA +
Preference number: 5 (lower is better)
Translates to: QEKVAFLPGGREKMTSMTRETVL*PAPPTR
Trigger: TCTCGTTGGTGGAGCTGGCAACAGGACAGTTTCCCT...AGTCATAGATGTCATCTTCTCTCTGCCCCCAGGGAGGAAAGCCACCTTCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397979.4
ENST00000397983.7
CDS-3UTR CAA 90 bp AGAGTCAACAGGCTAAGTGAGAGGAGAGGGATGCTACGCCTACGCTGCCCCCACTCTTGTCCACTTGATTaGCATGCAACACCCACAAAA +
Preference number: 5 (lower is better)
Translates to: RVNRLSERRGMLRLRCPHSCPLD*HATPTK
Trigger: TTTTGTGGGTGTTGCATGCAAATCAAGTGGACAAGA...GTGGGGGCAGCGTAGGCGTAGCATCCCTCTCCTCTCACTTAGCCTGTTGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS-3UTR CAA 90 bp GACCCCCTGAGATCAAAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGAGCGCGCAGTAGCTTATTATACTTaGGTCTCTTCCTGTGATCTT +
Preference number: 5 (lower is better)
Translates to: DPLRSKRERERERERERAVAYYT*VSSCDL
Trigger: AAGATCACAGGAAGAGACCAAAGTATAATAAGCTAC...TGCGCGCTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTTTGATCTCAGGGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
CDS CAA 72 bp AGGGTGGGCCTGGGCCGCTGGGGGCTGATATCCAGGTaGAGGTCGATCCTCCGCCGGGCCTCCCGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: RVGLGRWGLISR*RSILRRASRFS
Trigger: GGAGAACCGGGAGGCCCGGCGGAGGATCGACCTCAACCTGGATATCAGCCCCCAGCGGCCCAGGCCCACCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000468058.1
CDS CCA 72 bp TGGCCGCCGCCAAGCAGCTACCTGAAGAAGGGCAGGTaGGGCTGGCTCAGGACGCCGCTAGTCCGCGGTGAC +
Preference number: 6 (lower is better)
Translates to: WPPPSSYLKKGR*GWLRTPLVRGD
Trigger: GTCACCGCGGACTAGCGGCGTCCTGAGCCAGCCCCACCTGCCCTTCTTCAGGTAGCTGCTTGGCGGCGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS CCA 72 bp AGCTCTCTGAGGATGGCGAGCGGCTGCCCCCATCGTTaGCCAGCGGGAGCTGCAGGGCTGCTCGTTGGGACG +
Preference number: 6 (lower is better)
Translates to: SSLRMASGCPHR*PAGAAGLLVGT
Trigger: CGTCCCAACGAGCAGCCCTGCAGCTCCCGCTGGCCAACGATGGGGGCAGCCGCTCGCCATCCTCAGAGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397983.7
CDS CCA 72 bp GTCGGCCCGGATGTCATAGTCCGGCTTGGTGGGGTCTaGGGGGTCAATGCGCTCGGGTGCCATGTAGGCGGC +
Preference number: 6 (lower is better)
Translates to: VGPDVIVRLGGV*GVNALGCHVGG
Trigger: GCCGCCTACATGGCACCCGAGCGCATTGACCCCCCAGACCCCACCAAGCCGGACTATGACATCCGGGCCGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
ENST00000498118.1
CDS CCA 72 bp ACGTGGCCGGTCTTCCGGAAGCGCATCTTCCACACCTaGCCGCAGGTGCCGCTGCCCATCTCGCCCAAGTTC +
Preference number: 6 (lower is better)
Translates to: TWPVFRKRIFHT*PQVPLPISPKF
Trigger: GAACTTGGGCGAGATGGGCAGCGGCACCTGCGGCCAGGTGTGGAAGATGCGCTTCCGGAAGACCGGCCACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000465324.1
ENST00000468058.1
ENST00000494348.1
CDS CCA 72 bp CCGCCAAGCAGCTACCTGAAGAAGGGCAGGTGGGGCTaGCTCAGGACGCCGCTAGTCCGCGGTGACTCAGTC +
Preference number: 6 (lower is better)
Translates to: PPSSYLKKGRWG*LRTPLVRGDSV
Trigger: GACTGAGTCACCGCGGACTAGCGGCGTCCTGAGCCAGCCCCACCTGCCCTTCTTCAGGTAGCTGCTTGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS CAA 72 bp ATAATGGGCCTGGGCCGCTGGGGGCTGATATCCAGGTaGAGGTCGATCCTCCGCCGGGCCTCCCGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: IMGLGRWGLISR*RSILRRASRFS
Trigger: GGAGAACCGGGAGGCCCGGCGGAGGATCGACCTCAACCTGGATATCAGCCCCCAGCGGCCCAGGCCCATTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397983.7
CDS GCA 72 bp GTGCCCATGAGCTCCATGGCGATGAAGACGTCCGTCTaGAGGGAGAGGGGCACCCGGGGGAGCTGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: VPMSSMAMKTSV*RERGTRGSCVF
Trigger: GAAGACACAGCTCCCCCGGGTGCCCCTCTCCCTGCAGACGGACGTCTTCATCGCCATGGAGCTCATGGGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494348.1
CDS GCA 72 bp TCTTCCGGAAGCGCATCTTCCACACCTGGCCGCAGGTaGCGCTGCCCATCTCGCCCAAGTTCTCCAGGTCGT +
Preference number: 6 (lower is better)
Translates to: SSGSASSTPGRR*RCPSRPSSPGR
Trigger: ACGACCTGGAGAACTTGGGCGAGATGGGCAGCGGCACCTGCGGCCAGGTGTGGAAGATGCGCTTCCGGAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000465324.1
ENST00000468058.1
ENST00000494348.1
CDS GCA 72 bp GTCATCTTGCCCAGAATGCGCTCGGGGATGGGGCCCTaGATCCGCTTCTTGAGCTTCTCAGCGCAGGTGCCC +
Preference number: 6 (lower is better)
Translates to: VILPRMRSGMGP*IRFLSFSAQVP
Trigger: GGGCACCTGCGCTGAGAAGCTCAAGAAGCGGATGCAGGGCCCCATCCCCGAGCGCATTCTGGGCAAGATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
ENST00000494348.1
CDS CAA 90 bp GTGATCACAATAATGGGCCTGGGCCGCTGGGGGCTGATATCCAGGTaGAGGTCGATCCTCCGCCGGGCCTCCCGGTTCTCCTGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: VITIMGLGRWGLISR*RSILRRASRFSCFS
Trigger: GCTGAAGCAGGAGAACCGGGAGGCCCGGCGGAGGATCGACCTCAACCTGGATATCAGCCCCCAGCGGCCCAGGCCCATTATTGTGATCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397983.7
CDS TCA 72 bp TGCCGCTGCCCATCTCGCCCAAGTTCTCCAGGTCGTTaGTTTCTGCCTGGTAGCGCTGGCCCCCGATGGTCA +
Preference number: 6 (lower is better)
Translates to: CRCPSRPSSPGR*FLPGSAGPRWS
Trigger: TGACCATCGGGGGCCAGCGCTACCAGGCAGAAATCAACGACCTGGAGAACTTGGGCGAGATGGGCAGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000494348.1
CDS TCA 72 bp CAGGTGGGGCTGGCTCAGGACGCCGCTAGTCCGCGGTaGCTCAGTCTTCGCCATGACATCCTTGAACCAGGA +
Preference number: 6 (lower is better)
Translates to: QVGLAQDAASPR*LSLRHDILEPG
Trigger: TCCTGGTTCAAGGATGTCATGGCGAAGACTGAGTCACCGCGGACTAGCGGCGTCCTGAGCCAGCCCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS GCA 72 bp GCCCATCTCGCCCAAGTTCTCCAGGTCGTTGATTTCTaGCTGGTAGCGCTGGCCCCCGATGGTCAGGTAGCC +
Preference number: 6 (lower is better)
Translates to: AHLAQVLQVVDF*LVALAPDGQVA
Trigger: GGCTACCTGACCATCGGGGGCCAGCGCTACCAGGCAGAAATCAACGACCTGGAGAACTTGGGCGAGATGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000494348.1
CDS CAA 72 bp AGAATGCGCTCGGGGATGGGGCCCTGCATCCGCTTCTaGAGCTTCTCAGCGCAGGTGCCCATGAGCTCCATG +
Preference number: 6 (lower is better)
Translates to: RMRSGMGPCIRF*SFSAQVPMSSM
Trigger: CATGGAGCTCATGGGCACCTGCGCTGAGAAGCTCAAGAAGCGGATGCAGGGCCCCATCCCCGAGCGCATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
ENST00000494348.1
CDS CAA 90 bp ATCTTGCCCAGAATGCGCTCGGGGATGGGGCCCTGCATCCGCTTCTaGAGCTTCTCAGCGCAGGTGCCCATGAGCTCCATGGCGATGAAG +
Preference number: 6 (lower is better)
Translates to: ILPRMRSGMGPCIRF*SFSAQVPMSSMAMK
Trigger: CTTCATCGCCATGGAGCTCATGGGCACCTGCGCTGAGAAGCTCAAGAAGCGGATGCAGGGCCCCATCCCCGAGCGCATTCTGGGCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
ENST00000494348.1
CDS GCA 72 bp GGTAGTACAGCGCCTTCACAATCGCCACTGTCATCTTaGCCAGAATGCGCTCGGGGATGGGGCCCTGCATCC +
Preference number: 6 (lower is better)
Translates to: GSTAPSQSPLSS*PECARGWGPAS
Trigger: GGATGCAGGGCCCCATCCCCGAGCGCATTCTGGGCAAGATGACAGTGGCGATTGTGAAGGCGCTGTACTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
ENST00000494348.1
CDS GCA 72 bp GCCCATCTCGCCCAAGTTCTCCAGGTCGTTGATTTCTaGCTGGTAGCGCTGGGAGGAGAGGGAGGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: AHLAQVLQVVDF*LVALGGEGGLE
Trigger: CTCCAACCCTCCCTCTCCTCCCAGCGCTACCAGGCAGAAATCAACGACCTGGAGAACTTGGGCGAGATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465324.1
ENST00000468058.1
CDS CCA 72 bp TTCCCGGAGCGCCGCATTTGCTTAACGGCAATGACGTaGCCGGTCTTCCGGAAGCGCATCTTCCACACCTGG +
Preference number: 6 (lower is better)
Translates to: FPERRICLTAMT*PVFRKRIFHTW
Trigger: CCAGGTGTGGAAGATGCGCTTCCGGAAGACCGGCCACGTCATTGCCGTTAAGCAAATGCGGCGCTCCGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS CAA 72 bp CTAGTCCGCGGTGACTCAGTCTTCGCCATGACATCCTaGAACCAGGACGCCACGTCCACCTCCAGCGTCTCG +
Preference number: 6 (lower is better)
Translates to: LVRGDSVFAMTS*NQDATSTSSVS
Trigger: CGAGACGCTGGAGGTGGACGTGGCGTCCTGGTTCAAGGATGTCATGGCGAAGACTGAGTCACCGCGGACTAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS CAA 90 bp CAGTCGTGGCTCTTCAGCACCACATCCAGGTCCATGAGGATGCGCTaGTTCTCCTCCTTGTTCCCGGAGCGCCGCATTTGCTGCACAGGC +
Preference number: 6 (lower is better)
Translates to: QSWLFSTTSRSMRMR*FSSLFPERRICCTG
Trigger: GCCTGTGCAGCAAATGCGGCGCTCCGGGAACAAGGAGGAGAACAAGCGCATCCTCATGGACCTGGATGTGGTGCTGAAGAGCCACGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465324.1
ENST00000494348.1
CDS GCA 72 bp GTCCGTCTTGCAGTTCTTGTAGGGAAACTGTCCTGTTaGCAGCTCCACCTGGGAGGGAGACGGGCAGGGCAA +
Preference number: 6 (lower is better)
Translates to: VRLAVLVGKLSC*QLHLGGRRAGQ
Trigger: TTGCCCTGCCCGTCTCCCTCCCAGGTGGAGCTGGCAACAGGACAGTTTCCCTACAAGAACTGCAAGACGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397981.7
CDS CCA 72 bp GGGCTTAGAGTGATCACAATAATGGGCCTGGGCCGCTaGGGGCTGATATCCAGGTTGAGGTCGATCCTCCGC +
Preference number: 6 (lower is better)
Translates to: GLRVITIMGLGR*GLISRLRSILR
Trigger: GCGGAGGATCGACCTCAACCTGGATATCAGCCCCCAGCGGCCCAGGCCCATTATTGTGATCACTCTAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397983.7
CDS CAA 90 bp TTCAGCACCACATCCAGGTCCATGAGGATGCGCTTGTTCTCCTCCTaGTTCCCGGAGCGCCGCATTTGCTTAACGGCAATGACGTGGCCG +
Preference number: 6 (lower is better)
Translates to: FSTTSRSMRMRLFSS*FPERRICLTAMTWP
Trigger: CGGCCACGTCATTGCCGTTAAGCAAATGCGGCGCTCCGGGAACAAGGAGGAGAACAAGCGCATCCTCATGGACCTGGATGTGGTGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS CAA 90 bp CAGTCGTGGCTCTTCAGCACCACATCCAGGTCCATGAGGATGCGCTaGTTCTCCTCCTTGTTCCCGGAGCGCCGCATTTGCTTAACGGCA +
Preference number: 6 (lower is better)
Translates to: QSWLFSTTSRSMRMR*FSSLFPERRICLTA
Trigger: TGCCGTTAAGCAAATGCGGCGCTCCGGGAACAAGGAGGAGAACAAGCGCATCCTCATGGACCTGGATGTGGTGCTGAAGAGCCACGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS CAA 72 bp CTCTTCAGCACCACATCCAGGTCCATGAGGATGCGCTaGTTCTCCTCCTTGTTCCCGGAGCGCCGCATTTGC +
Preference number: 6 (lower is better)
Translates to: LFSTTSRSMRMR*FSSLFPERRIC
Trigger: GCAAATGCGGCGCTCCGGGAACAAGGAGGAGAACAAGCGCATCCTCATGGACCTGGATGTGGTGCTGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000465324.1
ENST00000468058.1
ENST00000494348.1
CDS TCA 72 bp CGGGCAGAAGCGGGGGCTCTTCCTGTAGGACTTTGGTaGGGACCTCAAAGTCCGTCTTGCAGTTCTTGTAGG +
Preference number: 6 (lower is better)
Translates to: RAEAGALPVGLW*GPQSPSCSSCR
Trigger: CCTACAAGAACTGCAAGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGAGCCCCCGCTTCTGCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS GCA 72 bp GCCATTCTGCGGCCGGGGCAGCGGTTAGGTCAATGGTaGAGATGTCCAAGCAGCGATGATAAAAAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: AILRPGQRLGQW*RCPSSDDKKAG
Trigger: ACCAGCCTTTTTATCATCGCTGCTTGGACATCTGCACCATTGACCTAACCGCTGCCCCGGCCGCAGAATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475022.1
CDS CCA 72 bp GACGCCATTCTGCGGCCGGGGCAGCGGTTAGGTCAATaGTGCAGATGTCCAAGCAGCGATGATAAAAAGGCT +
Preference number: 6 (lower is better)
Translates to: DAILRPGQRLGQ*CRCPSSDDKKA
Trigger: AGCCTTTTTATCATCGCTGCTTGGACATCTGCACCATTGACCTAACCGCTGCCCCGGCCGCAGAATGGCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475022.1
CDS CAA 72 bp TGTCCGGGCAGAAGCGGGGGCTCTTCCTGTAGGACTTaGGTGAGGACCTCAAAGTCCGTCTTGCAGTTCTTG +
Preference number: 6 (lower is better)
Translates to: CPGRSGGSSCRT*VRTSKSVLQFL
Trigger: CAAGAACTGCAAGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGAGCCCCCGCTTCTGCCCGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1
CDS CCA 72 bp CAAGCAGCGATGATAAAAAGGCTGGTACCTGCTCGTTaGGACGGGGCAGGAGCAGGGCTTAGAGTGATCACA +
Preference number: 6 (lower is better)
Translates to: QAAMIKRLVPAR*DGAGAGLRVIT
Trigger: TGTGATCACTCTAAGCCCTGCTCCTGCCCCGTCCCAACGAGCAGGTACCAGCCTTTTTATCATCGCTGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475022.1
CDS TCA 72 bp TGTTCAAGTAGCTTATTATACTTTGGTCTCTTCCTGTaGTCTTTAGTAAGGCAGTCTTTGACGAAGGACTGG +
Preference number: 6 (lower is better)
Translates to: CSSSLLYFGLFL*SLVRQSLTKDW
Trigger: CCAGTCCTTCGTCAAAGACTGCCTTACTAAAGATCACAGGAAGAGACCAAAGTATAATAAGCTACTTGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397979.4
ENST00000397981.7
ENST00000397983.7
ENST00000468058.1