RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP2K6 (Homo sapiens)

Ensembl gene IDs: ENSG00000108984

Ensembl transcript IDs: ENST00000359094.7, ENST00000586641.5, ENST00000588110.5, ENST00000589295.5, ENST00000589647.5, ENST00000590474.7, ENST00000591445.1, ENST00000613873.4

Found 538 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCAACAAACTCTGCAGAGAACTTGTCTGCTGGGAGTTGTGGCGATaGCTCCTCTACCACCTGTTTGAGCTGCTGAAATGGAGTTCCCCA +
Preference number: 1 (lower is better)
Translates to: VNKLCRELVCWELWR*LLYHLFELLKWSSP
Trigger: TGGGGAACTCCATTTCAGCAGCTCAAACAGGTGGTAGAGGAGCCATCGCCACAACTCCCAGCAGACAAGTTCTCTGCAGAGTTTGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR TCA 90 bp AAATTAAATGACCCTGTCTTCTGGCCACCTATCTCCCTATCTCTGTaGGCATACTCAGTACGGCAAAAGCCAGGGACTCACAGCCGTGGT +
Preference number: 1 (lower is better)
Translates to: KLNDPVFWPPISLSL*AYSVRQKPGTHSRG
Trigger: ACCACGGCTGTGAGTCCCTGGCTTTTGCCGTACTGAGTATGCTCACAGAGATAGGGAGATAGGTGGCCAGAAGACAGGGTCATTTAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 90 bp TGGCTCCTCTACCACCTGTTTGAGCTGCTGAAATGGAGTTCCCCATaGATCATAGGGAAATCGAAGGATGGCCAACTCAATCATCGTGAT +
Preference number: 1 (lower is better)
Translates to: WLLYHLFELLKWSSP*IIGKSKDGQLNHRD
Trigger: ATCACGATGATTGAGTTGGCCATCCTTCGATTTCCCTATGATTCATGGGGAACTCCATTTCAGCAGCTCAAACAGGTGGTAGAGGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR CCA 90 bp GAGGGGACCCAGAACGGTAGCCAGATGAACCGTGGAACAACCACATaGTTTAATATCTCAGCTGTTTCCTTGGTCAAAAACACAGATTCA +
Preference number: 1 (lower is better)
Translates to: EGTQNGSQMNRGTTT*FNISAVSLVKNTDS
Trigger: TGAATCTGTGTTTTTGACCAAGGAAACAGCTGAGATATTAAACCATGTGGTTGTTCCACGGTTCATCTGGCTACCGTTCTGGGTCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR GCA 90 bp AGACACTACTTTGAAGTGCTGGAGGTGGGTTTTGAAAGACAGGGGTaGATAGGACCTCTCCGATATCCTTTCAGAATATTTCAGGTACCA +
Preference number: 1 (lower is better)
Translates to: RHYFEVLEVGFERQG*IGPLRYPFRIFQVP
Trigger: TGGTACCTGAAATATTCTGAAAGGATATCGGAGAGGTCCTATGCACCCCTGTCTTTCAAAACCCACCTCCAGCACTTCAAAGTAGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 90 bp CAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATATaGCTCAGCTGGTGTTTAAGCATTCCCTTGTGTGCAGTTCATGAC +
Preference number: 1 (lower is better)
Translates to: QNSPDSLCVCTRHLI*LSWCLSIPLCAVHD
Trigger: GTCATGAACTGCACACAAGGGAATGCTTAAACACCAGCTGAGTCATATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 90 bp TTAGCACCAACCTTTGCATTTATCACTTCTTCCAGCCCCCAAACATaGCTTCACATCACTGTTCAGCCTTATATTCCAAAGTCCAGCAAC +
Preference number: 1 (lower is better)
Translates to: LAPTFAFITSSSPQT*LHITVQPYIPKSSN
Trigger: GTTGCTGGACTTTGGAATATAAGGCTGAACAGTGATGTGAAGTCATGTTTGGGGGCTGGAAGAAGTGATAAATGCAAAGGTTGGTGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 90 bp AGGAGCTCAGGCTTTGGTATTTGTGTTTCTTTACCCAGAGGTGGCTaGTGGATGAGGGGTATATTCTCAAAATGCTTTAGGCATATCGTT +
Preference number: 1 (lower is better)
Translates to: RSSGFGICVSLPRGG*WMRGIFSKCFRHIV
Trigger: AACGATATGCCTAAAGCATTTTGAGAATATACCCCTCATCCATCAGCCACCTCTGGGTAAAGAAACACAAATACCAAAGCCTGAGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 90 bp CAGAGACTTCCAGTTAAAAGGAACAATACTAGAAGCCAGATATTCTaGCTGGAGGTTGACAGAGGTTCAGATAGGCAGAGTTCACCTTCA +
Preference number: 1 (lower is better)
Translates to: QRLPVKRNNTRSQIF*LEVDRGSDRQSSPS
Trigger: TGAAGGTGAACTCTGCCTATCTGAACCTCTGTCAACCTCCAGTCAGAATATCTGGCTTCTAGTATTGTTCCTTTTAACTGGAAGTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR GCA 90 bp TGGAACACAGCCACCAGGCTCATTCATTTGTGTATTGCGTATAGATaGTTTCATGATACAACAGCAGAGCTGAGTAACTGTGACAGAGAT +
Preference number: 1 (lower is better)
Translates to: WNTATRLIHLCIAYR*FHDTTAELSNCDRD
Trigger: ATCTCTGTCACAGTTACTCAGCTCTGCTGTTGTATCATGAAAGCATCTATACGCAATACACAAATGAATGAGCCTGGTGGCTGTGTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 90 bp GTCACCAACAGCAGACAGTGCAAACATTGGCATAATAGATATCTGTaGTCCCCAAATTATGTACTGAGCTATTCCAAGGTACCACAGAAC +
Preference number: 1 (lower is better)
Translates to: VTNSRQCKHWHNRYL*SPNYVLSYSKVPQN
Trigger: GTTCTGTGGTACCTTGGAATAGCTCAGTACATAATTTGGGGACCACAGATATCTATTATGCCAATGTTTGCACTGTCTGCTGTTGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 90 bp GACTTCCAGTTAAAAGGAACAATACTAGAAGCCAGATATTCTGACTaGAGGTTGACAGAGGTTCAGATAGGCAGAGTTCACCTTCATCAC +
Preference number: 1 (lower is better)
Translates to: DFQLKGTILEARYSD*RLTEVQIGRVHLHH
Trigger: GTGATGAAGGTGAACTCTGCCTATCTGAACCTCTGTCAACCTCCAGTCAGAATATCTGGCTTCTAGTATTGTTCCTTTTAACTGGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR GCA 90 bp CCAAACAGAGATGCTCATAGAAACCACTTGGCAGGACTTGTGAATTaGCAAATAGACACACAAACACACACATACACACAGGTAGATGAA +
Preference number: 1 (lower is better)
Translates to: PNRDAHRNHLAGLVN*QIDTQTHTYTQVDE
Trigger: TTCATCTACCTGTGTGTATGTGTGTGTTTGTGTGTCTATTTGGCAATTCACAAGTCCTGCCAAGTGGTTTCTATGAGCATCTCTGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 90 bp TATAGCATTCTGTATGGCAAAGAGGGTGCAAGTCCTAACAGAAGGTaGAGCAAATTACATAGCTGTTCTCGTTCTATAGGGAAGACAAGA +
Preference number: 1 (lower is better)
Translates to: YSILYGKEGASPNRR*SKLHSCSRSIGKTR
Trigger: TCTTGTCTTCCCTATAGAACGAGAACAGCTATGTAATTTGCTTCACCTTCTGTTAGGACTTGCACCCTCTTTGCCATACAGAATGCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 90 bp CAGGCTTTGGTATTTGTGTTTCTTTACCCAGAGGTGGCTGATGGATaGGGGGTATATTCTCAAAATGCTTTAGGCATATCGTTCCTTTTT +
Preference number: 1 (lower is better)
Translates to: QALVFVFLYPEVADG*GVYSQNALGISFLF
Trigger: AAAAAGGAACGATATGCCTAAAGCATTTTGAGAATATACCCCTCATCCATCAGCCACCTCTGGGTAAAGAAACACAAATACCAAAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 90 bp AAGAGTGAAATAATGTGGAGAGTTGAGTGGCCAAGAATTTCATTTTaGGGGTCACCAACAGCAGACAGTGCAAACATTGGCATAATAGAT +
Preference number: 1 (lower is better)
Translates to: KSEIMWRVEWPRISF*GSPTADSANIGIID
Trigger: ATCTATTATGCCAATGTTTGCACTGTCTGCTGTTGGTGACCCTCAAAATGAAATTCTTGGCCACTCAACTCTCCACATTATTTCACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 90 bp CTGGTGAAGACCTGTAGTGTATTTCTAAGTACATTCACAGTTCTCTaGATTATGGGAAAGAAGCTTGCTCATCAGGTAACCTTCTCTAAC +
Preference number: 1 (lower is better)
Translates to: LVKTCSVFLSTFTVL*IMGKKLAHQVTFSN
Trigger: GTTAGAGAAGGTTACCTGATGAGCAAGCTTCTTTCCCATAATTCAGAGAACTGTGAATGTACTTAGAAATACACTACAGGTCTTCACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 90 bp CTGTCTTCTCTATCGTTAAACTGTTGTTTGAGTCAGTTTGTAGATTaGCACAACATTGAACACAACACACACGGTGTGAAGTTTTACACG +
Preference number: 1 (lower is better)
Translates to: LSSLSLNCCLSQFVD*HNIEHNTHGVKFYT
Trigger: CGTGTAAAACTTCACACCGTGTGTGTTGTGTTCAATGTTGTGTCAATCTACAAACTGACTCAAACAACAGTTTAACGATAGAGAAGACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 90 bp AAGAATTTCATTTTGAGGGTCACCAACAGCAGACAGTGCAAACATTaGCATAATAGATATCTGTGGTCCCCAAATTATGTACTGAGCTAT +
Preference number: 1 (lower is better)
Translates to: KNFILRVTNSRQCKH*HNRYLWSPNYVLSY
Trigger: ATAGCTCAGTACATAATTTGGGGACCACAGATATCTATTATGCCAATGTTTGCACTGTCTGCTGTTGGTGACCCTCAAAATGAAATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 90 bp ATCGTTAAACTGTTGTTTGAGTCAGTTTGTAGATTGACACAACATTaGACACAACACACACGGTGTGAAGTTTTACACGCATATACACAC +
Preference number: 1 (lower is better)
Translates to: IVKLLFESVCRLTQH*TQHTRCEVLHAYTH
Trigger: GTGTGTATATGCGTGTAAAACTTCACACCGTGTGTGTTGTGTTCAATGTTGTGTCAATCTACAAACTGACTCAAACAACAGTTTAACGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 90 bp CTTATGAGATCAACACACCATTTTCTTTCAAGAACACTTTGCTCCTaGATACTTAATGTTACTTGTCCCAGCTATGAAAGCCATAGCAAG +
Preference number: 1 (lower is better)
Translates to: LMRSTHHFLSRTLCS*ILNVTCPSYESHSK
Trigger: CTTGCTATGGCTTTCATAGCTGGGACAAGTAACATTAAGTATTCAGGAGCAAAGTGTTCTTGAAAGAAAATGGTGTGTTGATCTCATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR GCA 90 bp ACCACAATAGAATATTACTTAGTGAAATCAGATACCCAACCTTGCTaGTCATCTTTAAAGGAAGTTCTTATTATAAGGTCGCATGTTTGG +
Preference number: 1 (lower is better)
Translates to: TTIEYYLVKSDTQPC*SSLKEVLIIRSHVW
Trigger: CCAAACATGCGACCTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTCACTAAGTAATATTCTATTGTGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 90 bp CCAATGCTTATATCTACTGCAAGTCCTGCATACTGGCTATTTCCTTaGCTTTGGGATTTGGAGATAACATCATTAATAATGATAAACAAT +
Preference number: 1 (lower is better)
Translates to: PMLISTASPAYWLFP*LWDLEITSLIMINN
Trigger: ATTGTTTATCATTATTAATGATGTTATCTCCAAATCCCAAAGCCAAGGAAATAGCCAGTATGCAGGACTTGCAGTAGATATAAGCATTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTAATAATCATGCACTTTaGGCAGGGGTGGTGGGGGCG +
Preference number: 2 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPNNHAL*AGVVGA
Trigger: CGCCCCCACCACCCCTGCCCAAAGTGCATGATTATT...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTTTCACAGCTCCCAGATaGTTCCAATGTACACGAGGG +
Preference number: 2 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPFTAPR*FQCTRG
Trigger: CCCTCGTGTACATTGGAACCATCTGGGAGCTGTGAA...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 90 bp AAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACACCTTaGCAAAAGGCAGCAAGGGGTAGCTCTGTTAGCTTGAGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: KAVPGFHYPSPPTTP*QKAARGSSVSLSLR
Trigger: TCTGAGACTCAAGCTAACAGAGCTACCCCTTGCTGCCTTTTGCAAAGGTGTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp CTTCCAACTTCTAAAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACCCTCAGGGGCACCACTaGATATGGTCTGAAAACCAC +
Preference number: 2 (lower is better)
Translates to: LPTSKGCTRFPLPFSTYNPQGHH*IWSENH
Trigger: GTGGTTTTCAGACCATATTCAGTGGTGCCCCTGAGG...GTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTTTAGAAGTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATATTGCCCAGGCTGGAGTaGACTGACACGATGTCGGCT +
Preference number: 2 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLILPRLE*TDTMSA
Trigger: AGCCGACATCGTGTCAGTGCACTCCAGCCTGGGCAA...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 90 bp TTCTTTAAGCACTGTGAGGTAAAGTCAACAAACTCTGCAGAGAACTaGTCTGCTGGGAGTTGTGGCGATGGCTCCTCTACCACCTGTTTG +
Preference number: 2 (lower is better)
Translates to: FFKHCEVKSTNSAEN*SAGSCGDGSSTTCL
Trigger: CAAACAGGTGGTAGAGGAGCCATCGCCACAACTCCCAGCAGACAAGTTCTCTGCAGAGTTTGTTGACTTTACCTCACAGTGCTTAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR CAA 90 bp ATCTTAGCTTCGAGGGCAGAGGGAGTAACACAGCCAAAACAGCATTaGGGTAGGAAATTAGGAACTAGGTATCCATTGTCCTTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: ILASRAEGVTQPKQH*GRKLGTRYPLSFQA
Trigger: GGCCTGAAAGGACAATGGATACCTAGTTCCTAATTTCCTACCCAAATGCTGTTTTGGCTGTGTTACTCCCTCTGCCCTCGAAGCTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTACCAACTCAATCATCGTaGTGCCCAGACTCCAAATGT +
Preference number: 2 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVPTQSS*CPDSKC
Trigger: ACATTTGGAGTCTGGGCATCACGATGATTGAGTTGG...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR-3UTR TCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACAAATGGAGTTCCCCATaGATCATAGGGAAATCGAAG +
Preference number: 2 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNKWSSP*IIGKSK
Trigger: CTTCGATTTCCCTATGATTCATGGGGAACTCCATTT...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR-3UTR TCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAACCTGTTTGAGCTGCTaGAATGGAGTTCCCCATGAA +
Preference number: 2 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVTCLSC*NGVPHE
Trigger: TTCATGGGGAACTCCATTTCAGCAGCTCAAACAGGT...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR-3UTR TCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACATTCTAGCCCTTCTATaGATAGTAAGGCTGCTTCAC +
Preference number: 2 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNILALL*IVRLLH
Trigger: GTGAAGCAGCCTTACTATTCATAGAAGGGCTAGAAT...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTTTGTTTTTGCAACTTTaGCCTAGGTTCACAGATGGG +
Preference number: 2 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPLFLQL*PRFTDG
Trigger: CCCATCTGTGAACCTAGGCCAAAGTTGCAAAAACAA...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp CTTCCAACTTCTAAAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACAAGCAGAAGATCCTTTaGGCCAACAAATCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: LPTSKGCTRFPLPFSTYNKQKIL*ANKSLF
Trigger: GAAGAGGGATTTGTTGGCTCAAAGGATCTTCTGCTT...GTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTTTAGAAGTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTGCTGCTGAAGAAAGATaGGGCCTCAACGCAACTTGT +
Preference number: 2 (lower is better)
Translates to: LYLALISPSIEHTTGQTTAAEER*GLNATC
Trigger: ACAAGTTGCGTTGAGGCCGCATCTTTCTTCAGCAGC...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp CTTCCAACTTCTAAAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACTCTCAGAGGAGGGAGTaGATTCTAAAGCCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: LPTSKGCTRFPLPFSTYNSQRRE*ILKPFL
Trigger: CAGAAAAGGCTTTAGAATCCACTCCCTCCTCTGAGA...GTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTTTAGAAGTTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 90 bp ACACGCATATACACACATCTGGAGACCAGTTACAGTGTCTGCAGCTaGTTCCTTTCTCCTCAGCAGTATGAAACTGAAGAATATCCTGAG +
Preference number: 2 (lower is better)
Translates to: TRIYTHLETSYSVCS*FLSPQQYETEEYPE
Trigger: CTCAGGATATTCTTCAGTTTCATACTGCTGAGGAGAAAGGAACAAGCTGCAGACACTGTAACTGGTCTCCAGATGTGTGTATATGCGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATTGCCAATACGCTCCCTaGATTCAGCCTCCAGGCCTT +
Preference number: 2 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDCQYAP*IQPPGL
Trigger: AAGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCA...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATAAGAAGCCAGATATTCTaGCTGGAGGTTGACAGAGGT +
Preference number: 2 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLIRSQIF*LEVDRG
Trigger: ACCTCTGTCAACCTCCAGTCAGAATATCTGGCTTCT...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATACACCTACAACACCTTTaGAAAAGGCAGCAAGGGGTA +
Preference number: 2 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLIHLQHL*KRQQGV
Trigger: TACCCCTTGCTGCCTTTTGCAAAGGTGTTGTAGGTG...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp CTTCCAACTTCTAAAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACTCAAGATGGCTACTCTaGTGGGCAATATTCACTCAT +
Preference number: 2 (lower is better)
Translates to: LPTSKGCTRFPLPFSTYNSRWLL*WAIFTH
Trigger: ATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA...GTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTTTAGAAGTTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTCGTTTCCATTTCAGATaGCTTAACTGTGATAAAAGC +
Preference number: 2 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPRFHFR*LNCDKS
Trigger: GCTTTTATCACAGTTAAGCCATCTGAAATGGAAACG...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp CTTCCAACTTCTAAAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACTTTGAGGGTCATCCGTaGACACAGATGTCTTTATAT +
Preference number: 2 (lower is better)
Translates to: LPTSKGCTRFPLPFSTYNFEGHP*TQMSLY
Trigger: ATATAAAGACATCTGTGTTCACGGATGACCCTCAAA...GTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTTTAGAAGTTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp CTTCCAACTTCTAAAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACGTTCAGCCATCTGTCTaGAAAGGTAACTCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: LPTSKGCTRFPLPFSTYNVQPSV*KGNSFK
Trigger: TTTGAAAGAGTTACCTTTTCAGACAGATGGCTGAAC...GTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTTTAGAAGTTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp CTTCCAACTTCTAAAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACGCAGGACTTGTGAATTaGCAAATAGACACACAAACA +
Preference number: 2 (lower is better)
Translates to: LPTSKGCTRFPLPFSTYNAGLVN*QIDTQT
Trigger: TGTTTGTGTGTCTATTTGGCAATTCACAAGTCCTGC...GTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTTTAGAAGTTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTTGTATTGCGTATAGATaGTTTCATGATACAACAGCA +
Preference number: 2 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPCIAYR*FHDTTA
Trigger: TGCTGTTGTATCATGAAAGCATCTATACGCAATACA...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 90 bp CAGTTAAAAGGAACAATACTAGAAGCCAGATATTCTGACTGGAGGTaGACAGAGGTTCAGATAGGCAGAGTTCACCTTCATCACACTCTT +
Preference number: 2 (lower is better)
Translates to: QLKGTILEARYSDWR*TEVQIGRVHLHHTL
Trigger: AAGAGTGTGATGAAGGTGAACTCTGCCTATCTGAACCTCTGTCAACCTCCAGTCAGAATATCTGGCTTCTAGTATTGTTCCTTTTAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATAGATGGGAGCCTCAATaGGGGAATCCACTGAATAGC +
Preference number: 2 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDRWEPQ*GNPLNS
Trigger: GCTATTCAGTGGATTCCCTCATTGAGGCTCCCATCT...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTACCCTCCCGAAACAGTaGGCCATAAAAGGTGACAGT +
Preference number: 2 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLTLPKQ*AIKGDS
Trigger: ACTGTCACCTTTTATGGCGCACTGTTTCGGGAGGGT...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR-3UTR GCA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTATATTCAGATGGTCTATaGTGGTGGGGCATTAACTAT +
Preference number: 2 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLYSDGL*WWGINY
Trigger: ATAGTTAATGCCCCACCAGCATAGACCATCTGAATA...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp CTTCCAACTTCTAAAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACCAATGTAAATTTTCCTaGGGAAAAGGTCCTAGCTTT +
Preference number: 2 (lower is better)
Translates to: LPTSKGCTRFPLPFSTYNQCKFS*GKGPSF
Trigger: AAAGCTAGGACCTTTTCCCCAGGAAAATTTACATTG...GTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTTTAGAAGTTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp CTTCCAACTTCTAAAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACAACTGGAGAAAGCTATaGAGCACATCAAGATTAACT +
Preference number: 2 (lower is better)
Translates to: LPTSKGCTRFPLPFSTYNNWRKL*STSRLT
Trigger: AGTTAATCTTGATGTGCTCCATAGCTTTCTCCAGTT...GTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTTTAGAAGTTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 90 bp ACTGATAGAAGTCAATCATCCAGTCTTGTCCCCCATCAATGTTATTaGCATGAAAAGATGAATTTCTCAAGAATAGGGACCCAGGACAGG +
Preference number: 2 (lower is better)
Translates to: TDRSQSSSLVPHQCY*HEKMNFSRIGTQDR
Trigger: CCTGTCCTGGGTCCCTATTCTTGAGAAATTCATCTTTTCATGCAAATAACATTGATGGGGGACAAGACTGGATGATTGACTTCTATCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACTGTCCCCCTCAAAACTaGCAATTGTCCTCCTTACCA +
Preference number: 2 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHCPPQN*QLSSLP
Trigger: TGGTAAGGAGGACAATTGTCAGTTTTGAGGGGGACA...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTAATCATAGAAGATAGGTaGCTTTCACTTGCAAAATCC +
Preference number: 2 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLIIEDR*LSLAKS
Trigger: GGATTTTGCAAGTGAAAGTCACCTATCTTCTATGAT...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATATATCTCCCCAAGTATTaGACATACAACAGGACAAAC +
Preference number: 2 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLIYLPKY*TYNRTN
Trigger: GTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATA...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTACCAGAGAGACAATTTaGTCTACATCGTTCACCAAA +
Preference number: 2 (lower is better)
Translates to: LYLALISPSIEHTTGQTTTRETI*STSFTK
Trigger: TTTGGTGAACGATGTAGAGCAAATTGTCTCTCTGGT...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTACCATGCTCAGCCAATaGTGGAAATTTTTAAGGGAA +
Preference number: 2 (lower is better)
Translates to: LYLALISPSIEHTTGQTTTMLSQ*WKFLRE
Trigger: TTCCCTTAAAAATTTCCAGCATTGGCTGAGCATGGT...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATAGTTAAGAACTCTATCTaGCTTCTTCTACGTTTGAGG +
Preference number: 2 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLIVKNSI*LLLRLR
Trigger: CCTCAAACGTAGAAGAAGGCAGATAGAGTTCTTAAC...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAATATTTGGTGGCAATGTaGTTCCCCTGGAAGGATAAT +
Preference number: 2 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKYLVAM*FPWKDN
Trigger: ATTATCCTTCCAGGGGAAGCACATTGCCACCAAATA...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAAAGCAGTCACAACAGCTaGAACAGACATTTCACAAGA +
Preference number: 2 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKSSHNS*NRHFTR
Trigger: TCTTGTGAAATGTCTGTTCCAGCTGTTGTGACTGCT...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACGGTGGGGGCGGGGTGTaGAAATCTTCATTTGAAATT +
Preference number: 2 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHGGGGV*KSSFEI
Trigger: AATTTCAAATGAAGATTTCCACACCCCGCCCCCACC...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTTGCAAAAGTGTAAACTaGAGAAAGCTATGGAGCACA +
Preference number: 2 (lower is better)
Translates to: LYLALISPSIEHTTGQTTCKSVN*RKLWST
Trigger: TGTGCTCCATAGCTTTCTCCAGTTTACACTTTTGCA...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATATTGAGGTGGCTAAGTTaGAAAAGGTTAAGAACTCTA +
Preference number: 2 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLILRWLS*KRLRTL
Trigger: TAGAGTTCTTAACCTTTTTCAACTTAGCCACCTCAA...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp ATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTTTAGTCTCCAAGAATCAGTATGGTTTGCAACCTaGATCAATTGTTTTAGCAAC +
Preference number: 2 (lower is better)
Translates to: IHSRVNRLSPLLFSLQESVWFAT*INCFSN
Trigger: GTTGCTAAAACAATTGATGCAGGTTGCAAACCATAC...TGATTCTTGGAGACTAAAAAGCAGTGGACTTAATCGGTTGACCCTACTGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR-3UTR GCA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGAAAAGTCAACAAACTCTaGAGAGAACTTGTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRKVNKL*RELVCW
Trigger: CCAGCAGACAAGTTCTCTGCAGAGTTTGTTGACTTT...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR-3UTR GCA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATATTTAGCACCAACCTTTaGATTTATCACTTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLIFSTNL*IYHFFQ
Trigger: CTGGAAGAAGTGATAAATGCAAAGGTTGGTGCTAAA...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATGGTAACTCCTGCCTCTaGAAACCTAGAGATGCAAAA +
Preference number: 2 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDGNSCL*KPRDAK
Trigger: TTTTGCATCTCTAGGTTTGCAGAGGCAGGAGTTACC...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 90 bp TCCAAAGTCCAGCAACAATCCCCTAAGATAGTGGTTTGGCTTACTTaGTTGAAATATCTTGCAGACTCCAACACAAATATTGATAGTGAC +
Preference number: 2 (lower is better)
Translates to: SKVQQQSPKIVVWLT*LKYLADSNTNIDSD
Trigger: GTCACTATCAATATTTGTGTTGGAGTCTGCAAGATATTTCAACAAAGTAAGCCAAACCACTATCTTAGGGGATTGTTGCTGGACTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAATTTTCAAAAGTTGGTTaGTTGGCACTTACAACACAG +
Preference number: 2 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKFSKVG*LALTTQ
Trigger: CTGTGTTGTAAGTGCCAATCAACCAACTTTTGAAAA...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAAGTTTTTGTTACTTTCTaGAATGGCATGTTACTCCCT +
Preference number: 2 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKVFVTF*NGMLLP
Trigger: AGGGAGTAACATGCCATTGCAGAAAGTAACAAAAAC...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGAGACTTTTGAAGGCCTaGTCTAAGCTACAAACTCCA +
Preference number: 2 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRRLLKA*SKLQTP
Trigger: TGGAGTTTGTAGCTTAGACCAGGCCTTCAAAAGTCT...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 90 bp CCACAGAATGACCTACATACTTGTAAGGCAAAATTACCCTCACCTTaGGCAATTATTATACTTCCTTGTCTACTGACTGATAGAAGTCAA +
Preference number: 2 (lower is better)
Translates to: PQNDLHTCKAKLPSP*AIIILPCLLTDRSQ
Trigger: TTGACTTCTATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGCCTTACAAGTATGTAGGTCATTCTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATTCAGATACCCAACCTTaGTGCTCATCTTTAAAGGAA +
Preference number: 2 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDSDTQP*CSSLKE
Trigger: TTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGA...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGGAAAGCTTCGGTCACTaGCAGACTGTCCTTTTTATA +
Preference number: 2 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKESFGH*QTVLFI
Trigger: TATAAAAAGGACAGTCTGCCAGTGACCGAAGCTTTC...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR TCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACAATTACTTCACTCCTTaGTCATCAAGAAACCTAGAG +
Preference number: 2 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHNYFTP*SSRNLE
Trigger: CTCTAGGTTTCTTGATGATCAAGGAGTGAAGTAATT...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR GCA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATAACATTCCACCCACATaGTTTACAGGTCTTTACTTT +
Preference number: 2 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDNIPPT*FTGLYF
Trigger: AAAGTAAAGACCTGTAAAGCATGTGGGTGGAATGTT...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGTCAGATGGTCTATGCTaGTGGGGCATTAACTATTTT +
Preference number: 2 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKSDGLC*WGINYF
Trigger: AAAATAGTTAATGCCCCACCAGCATAGACCATCTGA...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGAGACAGTGCAAACATTaGCATAATAGATATCTGTGG +
Preference number: 2 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRRQCKH*HNRYLW
Trigger: CCACAGATATCTATTATGCCAATGTTTGCACTGTCT...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 90 bp CATAGGTGGGTGAATAAAGTAAGGAATACAATTGTAATTTTTCTCTaGATCTCCAAGAGAAGAACTTCCAGATTTAGGAAGATAGATGGG +
Preference number: 2 (lower is better)
Translates to: HRWVNKVRNTIVIFL*ISKRRTSRFRKIDG
Trigger: CCCATCTATCTTCCTAAATCTGGAAGTTCTTCTCTTGGAGATCAAGAGAAAAATTACAATTGTATTCCTTACTTTATTCACCCACCTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACTCCTGTTTTCATAGGTaGGTGAATAAAGTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHSCFHR*VNKVRN
Trigger: ATTCCTTACTTTATTCACCCACCTATGAAAACAGGA...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CCA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATATGCTCAGCCAATGCTaGAAATTTTTAAGGGAAATA +
Preference number: 2 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDMLSQC*KFLREI
Trigger: TATTTCCCTTAAAAATTTCCAGCATTGGCTGAGCAT...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 72 bp CTCTGCAGAGAACTTGTCTGCTGGGAGTTGTGGCGATaGCTCCTCTACCACCTGTTTGAGCTGCTGAAATGG +
Preference number: 3 (lower is better)
Translates to: LCRELVCWELWR*LLYHLFELLKW
Trigger: CCATTTCAGCAGCTCAAACAGGTGGTAGAGGAGCCATCGCCACAACTCCCAGCAGACAAGTTCTCTGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR TCA 72 bp TCCCTTCTGTTCACAAGAGACCCTCAGGGGCACCACTaGATATGGTCTGAAAACCACAGCTGTACCTCGCTC +
Preference number: 3 (lower is better)
Translates to: SLLFTRDPQGHH*IWSENHSCTSL
Trigger: GAGCGAGGTACAGCTGTGGTTTTCAGACCATATTCAGTGGTGCCCCTGAGGGTCTCTTGTGAACAGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 72 bp AACAAACTCTGCAGAGAACTTGTCTGCTGGGAGTTGTaGCGATGGCTCCTCTACCACCTGTTTGAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: NKLCRELVCWEL*RWLLYHLFELL
Trigger: CAGCAGCTCAAACAGGTGGTAGAGGAGCCATCGCCACAACTCCCAGCAGACAAGTTCTCTGCAGAGTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR-3UTR CAA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACCGGCCTCAACGCAACTaGTGGTCATCTGGTAGTCCA +
Preference number: 3 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNRPQRN*WSSGSP
Trigger: TGGACTACCAGATGACCACAAGTTGCGTTGAGGCCG...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 72 bp TCATCTCCTATAGAGGAGCCAGCTATTGCACGCTGCTaGAGAAAGATGCGGCCTCAACGCAACTTGTGGTCA +
Preference number: 3 (lower is better)
Translates to: SSPIEEPAIARC*RKMRPQRNLWS
Trigger: TGACCACAAGTTGCGTTGAGGCCGCATCTTTCTTCAGCAGCGTGCAATAGCTGGCTCCTCTATAGGAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR GCA 72 bp CCAATGAAGCTCATCTCCTATAGAGGAGCCAGCTATTaGACGCTGCTGAAGAAAGATGCGGCCTCAACGCAA +
Preference number: 3 (lower is better)
Translates to: PMKLISYRGASY*TLLKKDAASTQ
Trigger: TTGCGTTGAGGCCGCATCTTTCTTCAGCAGCGTGCAATAGCTGGCTCCTCTATAGGAGATGAGCTTCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 72 bp ATTCCTAGGCCCCACCAGTTAAATCCAAATCTCTGGTaGCTGGAACATTGGCAGCGACAGTGTTCACAGCTC +
Preference number: 3 (lower is better)
Translates to: IPRPHQLNPNLW*LEHWQRQCSQL
Trigger: GAGCTGTGAACACTGTCGCTGCCAATGTTCCAGCCACCAGAGATTTGGATTTAACTGGTGGGGCCTAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 72 bp CCAATTCCTAGGCCCCACCAGTTAAATCCAAATCTCTaGTGGCTGGAACATTGGCAGCGACAGTGTTCACAG +
Preference number: 3 (lower is better)
Translates to: PIPRPHQLNPNL*WLEHWQRQCSQ
Trigger: CTGTGAACACTGTCGCTGCCAATGTTCCAGCCACCAGAGATTTGGATTTAACTGGTGGGGCCTAGGAATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 72 bp AGAGCCCAGTCACTCCACGCCTTGTCACTGAGACGGTaGACAAAGATCAGGTCATTCTCAACCACTTTAGGA +
Preference number: 3 (lower is better)
Translates to: RAQSLHALSLRR*TKIRSFSTTLG
Trigger: TCCTAAAGTGGTTGAGAATGACCTGATCTTTGTTCACCGTCTCAGTGACAAGGCGTGGAGTGACTGGGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 72 bp GCATATGAAGAGCCCAGTCACTCCACGCCTTGTCACTaGGACGGTGAACAAAGATCAGGTCATTCTCAACCA +
Preference number: 3 (lower is better)
Translates to: AYEEPSHSTPCH*DGEQRSGHSQP
Trigger: TGGTTGAGAATGACCTGATCTTTGTTCACCGTCTCAGTGACAAGGCGTGGAGTGACTGGGCTCTTCATATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAAACTCTGCAGAGAACTaGTCTGCTGGGAGTTGTGGC +
Preference number: 3 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVNSAEN*SAGSCG
Trigger: GCCACAACTCCCAGCAGACAAGTTCTCTGCAGAGTT...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR-3UTR CAA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTTATGACCAGAGCATCTaGTCACTTCCCCTAAAAGAT +
Preference number: 3 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPYDQSI*SLPLKD
Trigger: ATCTTTTAGGGGAAGTGACAAGATGCTCTGGTCATA...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAAGGTAGCTCTGTTAGCTaGAGTCTCAGACCGTACCCC +
Preference number: 3 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKGSSVS*SLRPYP
Trigger: GGGGTACGGTCTGAGACTCAAGCTAACAGAGCTACC...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR GCA 72 bp AAAGATGTGGTGATCACCCAGGATTGGGCAGATGTTTaGAAAAATGGCAGCAGTCACAACAGCTGGAACAGA +
Preference number: 3 (lower is better)
Translates to: KDVVITQDWADV*KNGSSHNSWNR
Trigger: TCTGTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGTGATCACCACATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
3UTR CCA 72 bp AATATGAAGAAGTGTTCGGAAGTGTCACGCTCATTCTaGGCAGGAGCAACTCCTCCTTGTCAAGAACAAGGA +
Preference number: 3 (lower is better)
Translates to: NMKKCSEVSRSF*AGATPPCQEQG
Trigger: TCCTTGTTCTTGACAAGGAGGAGTTGCTCCTGCCCAGAATGAGCGTGACACTTCCGAACACTTCTTCATATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp AGCTCTGGGTATGTAGGCCGTTCTTTGGAATTCTTCTTTAAGCACTGTGAGGTAATCGCACATCTTCACTaGACCGAGAGCATTGATGAG +
Preference number: 3 (lower is better)
Translates to: SSGYVGRSLEFFFKHCEVIAHLH*TESIDE
Trigger: CTCATCAATGCTCTCGGTCAAGTGAAGATGTGCGAT...TACCTCACAGTGCTTAAAGAAGAATTCCAAAGAACGGCCTACATACCCAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR-3UTR CAA 90 bp AGCTCTGGGTATGTAGGCCGTTCTTTGGAATTCTTCTTTAAGCACTGTGAGGTAGGGGCCATGTATGGTTaGCAACCTGCATCAATTGTT +
Preference number: 3 (lower is better)
Translates to: SSGYVGRSLEFFFKHCEVGAMYG*QPASIV
Trigger: AACAATTGATGCAGGTTGCAAACCATACATGGCCCC...TACCTCACAGTGCTTAAAGAAGAATTCCAAAGAACGGCCTACATACCCAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR-3UTR CAA 90 bp CTTCCAACTTCTAAAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACGGCAGGACTTGTGAATaGCCAAATAGACACACAAAC +
Preference number: 3 (lower is better)
Translates to: LPTSKGCTRFPLPFSTYNGRTCE*PNRHTN
Trigger: GTTTGTGTGTCTATTTGGCAATTCACAAGTCCTGCC...GTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTTTAGAAGTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 72 bp TACCACCTGTTTGAGCTGCTGAAATGGAGTTCCCCATaGATCATAGGGAAATCGAAGGATGGCCAACTCAAT +
Preference number: 3 (lower is better)
Translates to: YHLFELLKWSSP*IIGKSKDGQLN
Trigger: ATTGAGTTGGCCATCCTTCGATTTCCCTATGATTCATGGGGAACTCCATTTCAGCAGCTCAAACAGGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR TCA 72 bp CCAGACTCTTTATGTGTGTGTACAAGGCACCTGATATaGCTCAGCTGGTGTTTAAGCATTCCCTTGTGTGCA +
Preference number: 3 (lower is better)
Translates to: PDSLCVCTRHLI*LSWCLSIPLCA
Trigger: TGCACACAAGGGAATGCTTAAACACCAGCTGAGTCATATCAGGTGCCTTGTACACACACATAAAGAGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 72 bp CTTTTGCTGTTTAGTCAACTTGCTAGGAACTCCCAATaGAGCTCATCTCCTATAGAGGAGCCAGCTATTGCA +
Preference number: 3 (lower is better)
Translates to: LLLFSQLARNSQ*SSSPIEEPAIA
Trigger: TGCAATAGCTGGCTCCTCTATAGGAGATGAGCTTCATTGGGAGTTCCTAGCAAGTTGACTAAACAGCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 72 bp ATAATGTGGAGAGTTGAGTGGCCAAGAATTTCATTTTaGGGGTCACCAACAGCAGACAGTGCAAACATTGGC +
Preference number: 3 (lower is better)
Translates to: IMWRVEWPRISF*GSPTADSANIG
Trigger: GCCAATGTTTGCACTGTCTGCTGTTGGTGACCCTCAAAATGAAATTCTTGGCCACTCAACTCTCCACATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 72 bp CTGTATGGCAAAGAGGGTGCAAGTCCTAACAGAAGGTaGAGCAAATTACATAGCTGTTCTCGTTCTATAGGG +
Preference number: 3 (lower is better)
Translates to: LYGKEGASPNRR*SKLHSCSRSIG
Trigger: CCCTATAGAACGAGAACAGCTATGTAATTTGCTTCACCTTCTGTTAGGACTTGCACCCTCTTTGCCATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR GCA 72 bp TTTGAAGTGCTGGAGGTGGGTTTTGAAAGACAGGGGTaGATAGGACCTCTCCGATATCCTTTCAGAATATTT +
Preference number: 3 (lower is better)
Translates to: FEVLEVGFERQG*IGPLRYPFRIF
Trigger: AAATATTCTGAAAGGATATCGGAGAGGTCCTATGCACCCCTGTCTTTCAAAACCCACCTCCAGCACTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 72 bp ATACTCAGTACGGCAAAAGCCAGGGACTCACAGCCGTaGTTGGCTATAAAATTTCCCATATTTGAGACTGTT +
Preference number: 3 (lower is better)
Translates to: ILSTAKARDSQP*LAIKFPIFETV
Trigger: AACAGTCTCAAATATGGGAAATTTTATAGCCAACCACGGCTGTGAGTCCCTGGCTTTTGCCGTACTGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 72 bp ACACGGTGTGAAGTTTTACACGCATATACACACATCTaGAGACCAGTTACAGTGTCTGCAGCTTGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: TRCEVLHAYTHI*RPVTVSAACSF
Trigger: AAAGGAACAAGCTGCAGACACTGTAACTGGTCTCCAGATGTGTGTATATGCGTGTAAAACTTCACACCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTATGCTGTTTAGTCAACTaGCTAGGAACTCCCAATGAA +
Preference number: 3 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLCCLVN*LGTPNE
Trigger: TTCATTGGGAGTTCCTAGCAAGTTGACTAAACAGCA...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTACAGCCAAAACAGCATTaGGGTAGGAAATTAGGAACT +
Preference number: 3 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLQPKQH*GRKLGT
Trigger: AGTTCCTAATTTCCTACCCAAATGCTGTTTTGGCTG...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTAGTAAGTGCCTAAACTaGCCAATACGCTCCCTGAAT +
Preference number: 3 (lower is better)
Translates to: LYLALISPSIEHTTGQTTSKCLN*PIRSLN
Trigger: ATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACT...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 72 bp CCAGTTAAAAGGAACAATACTAGAAGCCAGATATTCTaGCTGGAGGTTGACAGAGGTTCAGATAGGCAGAGT +
Preference number: 3 (lower is better)
Translates to: PVKRNNTRSQIF*LEVDRGSDRQS
Trigger: ACTCTGCCTATCTGAACCTCTGTCAACCTCCAGTCAGAATATCTGGCTTCTAGTATTGTTCCTTTTAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR GCA 72 bp GATGCTCATAGAAACCACTTGGCAGGACTTGTGAATTaGCAAATAGACACACAAACACACACATACACACAG +
Preference number: 3 (lower is better)
Translates to: DAHRNHLAGLVN*QIDTQTHTYTQ
Trigger: CTGTGTGTATGTGTGTGTTTGTGTGTCTATTTGGCAATTCACAAGTCCTGCCAAGTGGTTTCTATGAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 72 bp ACATTAACTACAAAGGCAATCCTTACAACTTACACATaGCAGGAGGGACAAACGCAGAAGAAGGCACCATTT +
Preference number: 3 (lower is better)
Translates to: TLTTKAILTTYT*QEGQTQKKAPF
Trigger: AAATGGTGCCTTCTTCTGCGTTTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGGATGCTGTAGTGAACTaGCTTCACCCCGAAACCCAC +
Preference number: 3 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKDAVVN*LHPETH
Trigger: GTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATTCCAGAGACACTACTTaGAAGTGCTGGAGGTGGGTT +
Preference number: 3 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDSRDTT*KCWRWV
Trigger: AACCCACCTCCAGCACTTCAAAGTAGTGTCTCTGGA...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 72 bp AAAAGGTTAAGAACTCTATCTGCCTTCTTCTACGTTTaGGGTAAGTCTGACCTCCCAAATTCCCCAATCTCA +
Preference number: 3 (lower is better)
Translates to: KRLRTLSAFFYV*GKSDLPNSPIS
Trigger: TGAGATTGGGGAATTTGGGAGGTCAGACTTACCTCAAACGTAGAAGAAGGCAGATAGAGTTCTTAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR GCA 72 bp AAGAATTTCATTTTGAGGGTCACCAACAGCAGACAGTaGAAACATTGGCATAATAGATATCTGTGGTCCCCA +
Preference number: 3 (lower is better)
Translates to: KNFILRVTNSRQ*KHWHNRYLWSP
Trigger: TGGGGACCACAGATATCTATTATGCCAATGTTTGCACTGTCTGCTGTTGGTGACCCTCAAAATGAAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 72 bp TTAAAAGGAACAATACTAGAAGCCAGATATTCTGACTaGAGGTTGACAGAGGTTCAGATAGGCAGAGTTCAC +
Preference number: 3 (lower is better)
Translates to: LKGTILEARYSD*RLTEVQIGRVH
Trigger: GTGAACTCTGCCTATCTGAACCTCTGTCAACCTCCAGTCAGAATATCTGGCTTCTAGTATTGTTCCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGGGATTGGGCAGATGTTaGCAAAAATGGCAGCAGTCA +
Preference number: 3 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRGLGRC*QKWQQS
Trigger: TGACTGCTGCCATTTTTGCAAACATCTGCCCAATCC...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATGGTGATCACCCAGGATaGGGCAGATGTTTGCAAAAA +
Preference number: 3 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDGDHPG*GRCLQK
Trigger: TTTTTGCAAACATCTGCCCAATCCTGGGTGATCACC...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATACACGAGAAAGAACTTTaGCTGTTTAGTCAACTTGCT +
Preference number: 3 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLIHEKEL*LFSQLA
Trigger: AGCAAGTTGACTAAACAGCAAAAGTTCTTTCTCGTG...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAAAAAGCAGAAGATCCTTaGAGCCAACAAATCCCTCTT +
Preference number: 3 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKKAEDP*SQQIPL
Trigger: AAGAGGGATTTGTTGGCTCAAAGGATCTTCTGCTTT...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATGCAATCCTCTCCATATaGAACTTGAGGCCAAGAAAG +
Preference number: 3 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDAILSI*NLRPRK
Trigger: CTTTCTTGGCCTCAAGTTCAATATGGAGAGGATTGC...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATCTCAGGCTTTGGTATTaGTGTTTCTTTACCCAGAGG +
Preference number: 3 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDLRLWY*CFFTQR
Trigger: CCTCTGGGTAAAGAAACACAAATACCAAAGCCTGAG...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR GCA 72 bp AACCTGTGGGTATATTTACCCACGAGAAAGAACTTTTaGTGTTTAGTCAACTTGCTAGGAACTCCCAATGAA +
Preference number: 3 (lower is better)
Translates to: NLWVYLPTRKNF*CLVNLLGTPNE
Trigger: TTCATTGGGAGTTCCTAGCAAGTTGACTAAACAGCAAAAGTTCTTTCTCGTGGGTAAATATACCCACAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 72 bp AGCAGACAGTGCAAACATTGGCATAATAGATATCTGTaGTCCCCAAATTATGTACTGAGCTATTCCAAGGTA +
Preference number: 3 (lower is better)
Translates to: SRQCKHWHNRYL*SPNYVLSYSKV
Trigger: TACCTTGGAATAGCTCAGTACATAATTTGGGGACCACAGATATCTATTATGCCAATGTTTGCACTGTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATAAGCATAATGTATGTTaGCCTAATGGTGCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDKHNVC*PNGAAG
Trigger: TCCTGCTGCACCATTAGGCAAACATACATTATGCTT...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 72 bp ACCTGTAGTGTATTTCTAAGTACATTCACAGTTCTCTaGATTATGGGAAAGAAGCTTGCTCATCAGGTAACC +
Preference number: 3 (lower is better)
Translates to: TCSVFLSTFTVL*IMGKKLAHQVT
Trigger: GGTTACCTGATGAGCAAGCTTCTTTCCCATAATTCAGAGAACTGTGAATGTACTTAGAAATACACTACAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 72 bp CTATCGTTAAACTGTTGTTTGAGTCAGTTTGTAGATTaGCACAACATTGAACACAACACACACGGTGTGAAG +
Preference number: 3 (lower is better)
Translates to: LSLNCCLSQFVD*HNIEHNTHGVK
Trigger: CTTCACACCGTGTGTGTTGTGTTCAATGTTGTGTCAATCTACAAACTGACTCAAACAACAGTTTAACGATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR GCA 72 bp AACTTAACCTATGTTAACACCAATGCTTATATCTACTaGAAGTCCTGCATACTGGCTATTTCCTTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: NLTYVNTNAYIY*KSCILAISLAL
Trigger: CAAAGCCAAGGAAATAGCCAGTATGCAGGACTTGCAGTAGATATAAGCATTGGTGTTAACATAGGTTAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 72 bp ATATCTACTGCAAGTCCTGCATACTGGCTATTTCCTTaGCTTTGGGATTTGGAGATAACATCATTAATAATG +
Preference number: 3 (lower is better)
Translates to: ISTASPAYWLFP*LWDLEITSLIM
Trigger: CATTATTAATGATGTTATCTCCAAATCCCAAAGCCAAGGAAATAGCCAGTATGCAGGACTTGCAGTAGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATTGTGGAAATCTTCATTaGAAATTATCTTCAGAGCCC +
Preference number: 3 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDCGNLH*KLSSEP
Trigger: GGGCTCTGAAGATAATTTCAAATGAAGATTTCCACA...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR-3UTR CAA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGCAATTACTTCACTCCTaGATCATCAAGAAACCTAGA +
Preference number: 3 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKQLLHS*IIKKPR
Trigger: TCTAGGTTTCTTGATGATCAAGGAGTGAAGTAATTG...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CCA 72 bp GAAAGAAATAGGACCTGTTTTTGTTACTTTCTGCAATaGCATGTTACTCCCTGCAAATGTTCAAAAGAAAGT +
Preference number: 3 (lower is better)
Translates to: ERNRTCFCYFLQ*HVTPCKCSKES
Trigger: ACTTTCTTTTGAACATTTGCAGGGAGTAACATGCCATTGCAGAAAGTAACAAAAACAGGTCCTATTTCTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR TCA 72 bp TTGCAGACTCCAACACAAATATTGATAGTGACCAAATaGTGCAAATTACCCATTTCTGACCACAATAGAATA +
Preference number: 3 (lower is better)
Translates to: LQTPTQILIVTK*CKLPISDHNRI
Trigger: TATTCTATTGTGGTCAGAAATGGGTAATTTGCATCATTTGGTCACTATCAATATTTGTGTTGGAGTCTGCAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGTCCGCTTCACTGCCATaGTCTGCCCGCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLSASLP*SARWAR
Trigger: ACGTGCCCAGCGGGCAGATCATGGCAGTGAAGCGGA...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCATGCCCGCTGGGCACGTaGCGCATCTTCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSCPLGT*RIFSTT
Trigger: GGTGGTGGAGAAGATGCGGCACGTGCCCAGCGGGCA...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCATTCACTGCCATGATCTaGCCGCTGGGCACGTGCCGC +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSFTAMI*PLGTCR
Trigger: GCGGCACGTGCCCAGCGGGCAGATCATGGCAGTGAA...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTATTCACTGCCATGATCTaGCCGCTGGGCACGTGCCGC +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLFTAMI*PLGTCR
Trigger: GCGGCACGTGCCCAGCGGGCAGATCATGGCAGTGAA...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCCTGGCTATTTACTGTaGCTCGGATCCGCTCGTCCC +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLPGYLL*LGSARP
Trigger: GGGACGAGCGGATCCGAGCCACAGTAAATAGCCAGG...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS-3UTR GCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTATGCCCGCTGGGCACGTaGCGCATCTTCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVCPLGT*RIFSTT
Trigger: GGTGGTGGAGAAGATGCGGCACGTGCCCAGCGGGCA...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTATCGGATCCGCTTCACTaGCATGATCTGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLSDPLH*HDLPAG
Trigger: CCCAGCGGGCAGATCATGGCAGTGAAGCGGATCCGA...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTGTCTGCTGGGAGTTGTaGCGATGGCTCCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLVCWEL*RWLLYH
Trigger: GTGGTAGAGGAGCCATCGCCACAACTCCCAGCAGAC...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAGTCTGCTGGGAGTTGTaGCGATGGCTCCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSVCWEL*RWLLYH
Trigger: GTGGTAGAGGAGCCATCGCCACAACTCCCAGCAGAC...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTATCCGCTTCACTGCCATaGTCTGCCCGCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVSASLP*SARWAR
Trigger: ACGTGCCCAGCGGGCAGATCATGGCAGTGAAGCGGA...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTGCCAATACGCTCCCTaGATTCAGCCTCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLCQYAP*IQPPGL
Trigger: AAGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCA...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGTGGGAGTTGTGGCGATaGCTCCTCTACCACCTGTTT +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLWELWR*LLYHLF
Trigger: AAACAGGTGGTAGAGGAGCCATCGCCACAACTCCCA...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAGTCTGCTGGGAGTTGTaGCGATGGCTCCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLVCWEL*RWLLYH
Trigger: GTGGTAGAGGAGCCATCGCCACAACTCCCAGCAGAC...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCCTGGCTATTTACTGTaGCTCGGATCCGCTTCACTG +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLPGYLL*LGSASL
Trigger: CAGTGAAGCGGATCCGAGCCACAGTAAATAGCCAGG...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
3UTR CAA 72 bp GTCAACAAACTCTGCAGAGAACTTGTCTGCTGGGAGTaGTGGCGATGGCTCCTCTACCACCTGTTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VNKLCRELVCWE*WRWLLYHLFEL
Trigger: CAGCTCAAACAGGTGGTAGAGGAGCCATCGCCACAACTCCCAGCAGACAAGTTCTCTGCAGAGTTTGTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS-3UTR TCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGTTACTGCCTCCTAGTTaGAATTGCCAGCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLLLPPS*NCQPPV
Trigger: GACAGGAGGCTGGCAATTTCAACTAGGAGGCAGTAA...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589647.5
ENST00000613873.4
CDS-3UTR GCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGTGCAAGCTGCAGGCGTaGAATCTTCATGCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLCKLQA*NLHASG
Trigger: TCCACTTGCATGAAGATTGCACGCCTGCAGCTTGCA...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR GCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTATCGGATCCGCTTCACTaGCATGATCTGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVSDPLH*HDLPAG
Trigger: CCCAGCGGGCAGATCATGGCAGTGAAGCGGATCCGA...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGGGTGTGGAACTGGTCTaGGGTTGTTCAAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLGVELV*GCSNAS
Trigger: AGAAGCATTTGAACAACCTCAGACCAGTTCCACACC...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGGGCTTGACGTCTCTGTaGATGACAGACAGCTTACTA +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLGLTSL*MTDSLL
Trigger: TAGTAAGCTGTCTGTCATTCACAGAGACGTCAAGCC...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGTCGCACATCTTCACTTaGCCGAGAGCATTGATGAGT +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLSHIFT*PRALMS
Trigger: ACTCATCAATGCTCTCGGTCAAGTGAAGATGTGCGA...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGACCTGTTTGAGCTGCTaGAATGGAGTTCCCCATGAA +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLTCLSC*NGVPHE
Trigger: TTCATGGGGAACTCCATTTCAGCAGCTCAAACAGGT...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAGCTATTGCACGCTGCTaGAGAAAGATGCGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLAIARC*RKMRPQ
Trigger: TTGAGGCCGCATCTTTCTTCAGCAGCGTGCAATAGC...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTAGGCTCCAGGTCATCTaGCTTCACCTCAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLRLQVI*LHLKVL
Trigger: CAGAACTTTGAGGTGAAGGCAGATGACCTGGAGCCT...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTACCCTCCCGAAACAGTaGGCCATAAAAGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLTLPKQ*AIKGDS
Trigger: ACTGTCACCTTTTATGGCGCACTGTTTCGGGAGGGT...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTATGCAGAGAACTTGTCTaGTGGGAGTTGTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLCRELV*WELWRW
Trigger: CCATCGCCACAACTCCCAGCAGACAAGTTCTCTGCA...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTAACGATGTCGGCTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVTMSAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGCCGACATCGT...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGGAGGTGGTGTGGAACTaGTCTGAGGTTGTTCAAATG +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLEVVWN*SEVVQM
Trigger: CATTTGAACAACCTCAGACCAGTTCCACACCACCTC...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTCTGGTTGAGCTCTaGGTTTATTCTTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLLLVEL*VYSFRG
Trigger: GCCCCTGAAAGAATAAACCCAGAGCTCAACCAGAAG...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTGGGCTGATATTCAGATaGTCTATGCTGGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLGLIFR*SMLVGH
Trigger: ATGCCCCACCAGCATAGACCATCTGAATATCAGCCC...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 72 bp CACTGTGAGGTAAAGTCAACAAACTCTGCAGAGAACTaGTCTGCTGGGAGTTGTGGCGATGGCTCCTCTACC +
Preference number: 4 (lower is better)
Translates to: HCEVKSTNSAEN*SAGSCGDGSST
Trigger: GGTAGAGGAGCCATCGCCACAACTCCCAGCAGACAAGTTCTCTGCAGAGTTTGTTGACTTTACCTCACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359094.7
3UTR CAA 72 bp CCACCAGTTAAATCCAAATCTCTGGTGGCTGGAACATaGGCAGCGACAGTGTTCACAGCTCCCAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: PPVKSKSLVAGT*AATVFTAPRWF
Trigger: GAACCATCTGGGAGCTGTGAACACTGTCGCTGCCAATGTTCCAGCCACCAGAGATTTGGATTTAACTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACAAGTGGAGTTTCTCTTaGCCGATGCAGCAGATGGAC +
Preference number: 4 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNKWSFS*PMQQMD
Trigger: GTCCATCTGCTGCATCGGTCAAGAGAAACTCCACTT...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR TCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGTTCTTGCCTTTCGACTaGGACATTTTCCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLFLPFD*DIFPFP
Trigger: AGGAAAGGGGAAAATGTCTCAGTCGAAAGGCAAGAA...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR TCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCACCAACTCAATCATCGTaGTGCCCAGACTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSPTQSS*CPDSKC
Trigger: ACATTTGGAGTCTGGGCATCACGATGATTGAGTTGG...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTATTACTGCCTCCTAGTTaGAATTGCCAGCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLLLPPS*NCQPPV
Trigger: GACAGGAGGCTGGCAATTTCAACTAGGAGGCAGTAA...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589647.5
ENST00000613873.4
CDS-3UTR GCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGGCTCCAGGTCATCTaGCTTCACCTCAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLRLQVI*LHLKVL
Trigger: CAGAACTTTGAGGTGAAGGCAGATGACCTGGAGCCT...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTATCGGATCCGCTTCACTaGCATGATCTGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVSDPLH*HDLPAG
Trigger: CCCAGCGGGCAGATCATGGCAGTGAAGCGGATCCGA...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTATTGCCCAGGCTGGAGTaGACTGACACGATGTCGGCT +
Preference number: 4 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLLPRLE*TDTMSA
Trigger: AGCCGACATCGTGTCAGTGCACTCCAGCCTGGGCAA...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGCCGTTTCTGTTCCTaGCTATTTACTGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLSRFCS*LFTVAR
Trigger: CCGAGCCACAGTAAATAGCCAGGAACAGAAACGGCT...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACCCTCAACGCAACTTGTaGTCATCTGGTAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNPQRNL*SSGSPC
Trigger: GCATGGACTACCAGATGACCACAAGTTGCGTTGAGG...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 72 bp CCAGGTTTCCATTACCCTTCTCCACCTACAACACCTTaGCAAAAGGCAGCAAGGGGTAGCTCTGTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: PGFHYPSPPTTP*QKAARGSSVSL
Trigger: CAAGCTAACAGAGCTACCCCTTGCTGCCTTTTGCAAAGGTGTTGTAGGTGGAGAAGGGTAATGGAAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAGGCTTGACGTCTCTGTaGATGACAGACAGCTTACTA +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLGLTSL*MTDSLL
Trigger: TAGTAAGCTGTCTGTCATTCACAGAGACGTCAAGCC...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTCCAACTCAATCATCGTaGTGCCCAGACTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPPTQSS*CPDSKC
Trigger: ACATTTGGAGTCTGGGCATCACGATGATTGAGTTGG...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTACCAACTCAATCATCGTaGTGCCCAGACTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLPTQSS*CPDSKC
Trigger: ACATTTGGAGTCTGGGCATCACGATGATTGAGTTGG...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACACCTGTTTGAGCTGCTaGAATGGAGTTCCCCATGAA +
Preference number: 4 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNTCLSC*NGVPHE
Trigger: TTCATGGGGAACTCCATTTCAGCAGCTCAAACAGGT...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR TCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTACCACTGAATATGGTCTaGAAACCACAGCTGTACCTC +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLPLNMV*KPQLYL
Trigger: GAGGTACAGCTGTGGTTTTCAGACCATATTCAGTGG...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACATCTCCCTATCTCTGTaGGCATACTCAGTACGGCAA +
Preference number: 4 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNISLSL*AYSVRQ
Trigger: TTGCCGTACTGAGTATGCTCACAGAGATAGGGAGAT...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTAACAAAGATGCAAGCTaGAGGCGTGCAATCTTCATG +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLNKDAS*RRAIFM
Trigger: CATGAAGATTGCACGCCTGCAGCTTGCATCTTTGTT...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR GCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGAAAGTCAACAAACTCTaGAGAGAACTTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLKVNKL*RELVCW
Trigger: CCAGCAGACAAGTTCTCTGCAGAGTTTGTTGACTTT...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTTGCCCGCTGGGCACGTaGCGCATCTTCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLCPLGT*RIFSTT
Trigger: GGTGGTGGAGAAGATGCGGCACGTGCCCAGCGGGCA...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAGTGGAGTATATAAACTaGAACCCCCTCCCAACAACA +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSVEYIN*NPLPTT
Trigger: TGTTGTTGGGAGGGGGTTGCAGTTTATATACTCCAC...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTACAGGGTTTCGCTTCTTaGCTGAATTTACTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLQGFAS*LNLLPP
Trigger: AGGAGGCAGTAAATTCAGGCAAGAAGCGAAACCCTG...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613873.4
CDS-3UTR CCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAGAGGTGGTGTGGAACTaGTCTGAGGTTGTTCAAATG +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLEVVWN*SEVVQM
Trigger: CATTTGAACAACCTCAGACCAGTTCCACACCACCTC...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACAATCTCGAGGTGGTGTaGAACTGGTCTGAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNNLEVV*NWSEVV
Trigger: AACAACCTCAGACCAGTTCCACACCACCTCGAGATT...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR CCA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGAGTCCACCGTCCTCATaGAAATATCCAAATCCATCA +
Preference number: 4 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLSPPSS*KYPNPS
Trigger: TGATGGATTTGGATATTTCCATGAGGACGGTGGACT...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTACCTGGCTATTTACTGTaGCTCGGATCCGCTTCACTG +
Preference number: 4 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVPGYLL*LGSASL
Trigger: CAGTGAAGCGGATCCGAGCCACAGTAAATAGCCAGG...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTAAAGTTTGCCAACCGTaGTCTAGGATGTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLKVCQP*SRMSQS
Trigger: TGACTGTGACATCCTAGACCACGGTTGGCAAACTTT...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTATTCTTTACCCAGAGGTaGCTGATGGATGAGGGGTAT +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLFFTQR*LMDEGY
Trigger: ATACCCCTCATCCATCAGCCACCTCTGGGTAAAGAA...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGGGACTCACAGCCGTaGTTGGCTATAAAATTTCCC +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLRDSQP*LAIKFP
Trigger: GGGAAATTTTATAGCCAACCACGGCTGTGAGTCCCT...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTGGGACCCAGGACAGGTaGCTTCTCCAAATGTTAAAA +
Preference number: 4 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPGTQDR*LLQMLK
Trigger: TTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCC...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTTTCTTGCCTTTCGACTaGGACATTTTCCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPFLPFD*DIFPFP
Trigger: AGGAAAGGGGAAAATGTCTCAGTCGAAAGGCAAGAA...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTAAATGGAGTTCCCCATaGATCATAGGGAAATCGAAG +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLKWSSP*IIGKSK
Trigger: CTTCGATTTCCCTATGATTCATGGGGAACTCCATTT...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTTGGGAAAAAGAGTATaGCCAGAGCATCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLLGKRV*PEHLVT
Trigger: AGTGACAAGATGCTCTGGTCATACTCTTTTTCCCAA...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR TCA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGTCCGCTTCACTGCCATaGTCTGCCCGCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRSASLP*SARWAR
Trigger: ACGTGCCCAGCGGGCAGATCATGGCAGTGAAGCGGA...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATTGTGCTGCAGCTACATaGTGGGCCAGGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDCAAAT*WARAGS
Trigger: GCTGCCAGCCCTGGCCCATCATGTAGCTGCAGCACA...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTATTCTAGCCCTTCTATaGATAGTAAGGCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLILALL*IVRLLH
Trigger: GTGAAGCAGCCTTACTATTCATAGAAGGGCTAGAAT...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTCCAAGAATTTCATTTTaGGGGTCACCAACAGCAGAC +
Preference number: 4 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPPRISF*GSPTAD
Trigger: GTCTGCTGTTGGTGACCCTCAAAATGAAATTCTTGG...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACAAGCAGAAGATCCTTTaGGCCAACAAATCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNKQKIL*ANKSLF
Trigger: GAAGAGGGATTTGTTGGCTCAAAGGATCTTCTGCTT...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAGAGGTGGCTGATGGATaGGGGGTATATTCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLEVADG*GVYSQN
Trigger: ATTTTGAGAATATACCCCTCATCCATCAGCCACCTC...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp CTTCCAACTTCTAAAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACTTACCCAGAGGTGGCTaGTGGATGAGGGGTATATTC +
Preference number: 4 (lower is better)
Translates to: LPTSKGCTRFPLPFSTYNLPRGG*WMRGIF
Trigger: GAATATACCCCTCATCCATCAGCCACCTCTGGGTAA...GTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTTTAGAAGTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTATTTCGCTTCTTGCCCTaGATTTACTGCCTCCTAGTT +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLFRFLP*IYCLLV
Trigger: AACTAGGAGGCAGTAAATTCAGGGCAAGAAGCGAAA...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589647.5
CDS-3UTR GCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAAGGCTCCAGGTCATCTaGCTTCACCTCAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVRLQVI*LHLKVL
Trigger: CAGAACTTTGAGGTGAAGGCAGATGACCTGGAGCCT...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAACCCTCCCGAAACAGTaGGCCATAAAAGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVTLPKQ*AIKGDS
Trigger: ACTGTCACCTTTTATGGCGCACTGTTTCGGGAGGGT...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACTTCACTGCCATGATCTaGCCGCTGGGCACGTGCCGC +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHFTAMI*PLGTCR
Trigger: GCGGCACGTGCCCAGCGGGCAGATCATGGCAGTGAA...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCATCATCTGGTAGTCCATaGCCAGGAATTAATTCAACC +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSSSGSP*PGINST
Trigger: GGTTGAATTAATTCCTGGGCATGGACTACCAGATGA...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAGACACTACTTTGAAGTaGTGGAGGTGGGTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSDTTLK*WRWVLK
Trigger: TTTCAAAACCCACCTCCAGCACTTCAAAGTAGTGTC...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTACCAGTTACAGTGTCTaGAGCTTGTTCCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPTSYSV*SLFLSP
Trigger: AGGAGAAAGGAACAAGCTGCAGACACTGTAACTGGT...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTAGTCCACCGTCCTCATaGAAATATCCAAATCCATCA +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLSPPSS*KYPNPS
Trigger: TGATGGATTTGGATATTTCCATGAGGACGGTGGACT...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAAGTCCACCGTCCTCATaGAAATATCCAAATCCATCA +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSSPPSS*KYPNPS
Trigger: TGATGGATTTGGATATTTCCATGAGGACGGTGGACT...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTATTCAGGGGCCATGTATaGTTTGCAACCTGCATCAAT +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLFRGHV*FATCIN
Trigger: ATTGATGCAGGTTGCAAACCATACATGGCCCCTGAA...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp AGCTCTGGGTATGTAGGCCGTTCTTTGGAATTCTTCTTTAAGCACTGTGAGGTAAGAGAACTTGTCTGCTaGGAGTTGTGGCGATGGCTC +
Preference number: 4 (lower is better)
Translates to: SSGYVGRSLEFFFKHCEVRELVC*ELWRWL
Trigger: GAGCCATCGCCACAACTCCCAGCAGACAAGTTCTCT...TACCTCACAGTGCTTAAAGAAGAATTCCAAAGAACGGCCTACATACCCAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS-3UTR CCA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTACCTGGCTATTTACTGTaGCTCGGATCCGCTTCACTG +
Preference number: 4 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLPGYLL*LGSASL
Trigger: CAGTGAAGCGGATCCGAGCCACAGTAAATAGCCAGG...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTGTGTCACGCTCATTCTaGGCAGGAGCAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LYLALISPSIEHTTGQTTVSRSF*AGATPP
Trigger: AGGAGGAGTTGCTCCTGCCCAGAATGAGCGTGACAC...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTAGATTGACTAGTGTCTaGGTTCGTGATTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLRLTSV*VRDSPC
Trigger: ACAAGGAGAATCACGAACCCAGACACTAGTCAATCT...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTACTACTTTGAAGTGCTaGAGGTGGGTTTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLTTLKC*RWVLKD
Trigger: GTCTTTCAAAACCCACCTCCAGCACTTCAAAGTAGT...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTAAAGTGGAGTTTCTCTTaGCCGATGCAGCAGATGGAC +
Preference number: 4 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLKWSFS*PMQQMD
Trigger: GTCCATCTGCTGCATCGGTCAAGAGAAACTCCACTT...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAAGTCCTAACAGAAGGTaGAGCAAATTACATAGCTGT +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSSPNRR*SKLHSC
Trigger: ACAGCTATGTAATTTGCTTCACCTTCTGTTAGGACT...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTAGTAGCTCTGTTAGCTTaGGTCTCAGACCGTACCCCT +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVVALLA*VSDRTP
Trigger: AGGGGTACGGTCTGAGACTCAAGCTAACAGAGCTAC...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACTGGAAATGCACACCTTaGAAAACAGACTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNWKCTP*KTDWKV
Trigger: CACTTTCCAGTCTGTTTTGCAAGGTGTGCATTTCCA...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAGCAGGACTTGTGAATTaGCAAATAGACACACAAACA +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSAGLVN*QIDTQT
Trigger: TGTTTGTGTGTCTATTTGGCAATTCACAAGTCCTGC...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCATGCTCAGCCAATaGTGGAAATTTTTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSTMLSQ*WKFLRE
Trigger: TTCCCTTAAAAATTTCCAGCATTGGCTGAGCATGGT...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGTGGGAGTTGTGGCGATaGCTCCTCTACCACCTGTTT +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGWELWR*LLYHLF
Trigger: AAACAGGTGGTAGAGGAGCCATCGCCACAACTCCCA...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTAGAGAACTTGTCTGCTaGGAGTTGTGGCGATGGCTC +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSRELVC*ELWRWL
Trigger: GAGCCATCGCCACAACTCCCAGCAGACAAGTTCTCT...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGACCGATGCAGCAGATaGACTTTCAGGGAATCAAGA +
Preference number: 4 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVDRCSR*TFRESR
Trigger: TCTTGATTCCCTGAAAGTCCATCTGCTGCATCGGTC...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCATGTTACTTTCTGCAATaGCATGTTACTCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSCYFLQ*HVTPCK
Trigger: TTTGCAGGGAGTAACATGCCATTGCAGAAAGTAACA...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAGATGGTCTATGCTGGTaGGGCATTAACTATTTTGAG +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLDGLCW*GINYFE
Trigger: CTCAAAATAGTTAATGCCCCACCAGCATAGACCATC...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp CTTCCAACTTCTAAAGGCTGTACCAGGTTTCCATTACCCTTCTCCACCTACAACGGTGGGGGCGGGGTGTaGAAATCTTCATTTGAAATT +
Preference number: 4 (lower is better)
Translates to: LPTSKGCTRFPLPFSTYNGGGGV*KSSFEI
Trigger: AATTTCAAATGAAGATTTCCACACCCCGCCCCCACC...GTTGTAGGTGGAGAAGGGTAATGGAAACCTGGTACAGCCTTTAGAAGTTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAAAATAATCATGCACTTTaGGCAGGGGTGGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKNNHAL*AGVVGA
Trigger: CGCCCCCACCACCCCTGCCCAAAGTGCATGATTATT...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAAAATGTCTGCCCTCTaGAACAAAAGGTTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLKMSAL*NKRLRS
Trigger: GCTCCTTAACCTTTTGTTCCAGAGGGCAGACATTTT...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTGGATTCATGTAGGGTaGAAAATGGATGTTGCATTA +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLWIHVG*KMDVAL
Trigger: TAATGCAACATCCATTTTTCACCCTACATGAATCCA...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTAAGATGACTTTCTATTaGTGCTGTAGTGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLKMTFY*CCSELA
Trigger: AGCAAGTTCACTACAGCATCAATAGAAAGTCATCTT...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTAATTACTTCACTCCTTaGTCATCAAGAAACCTAGAG +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLNYFTP*SSRNLE
Trigger: CTCTAGGTTTCTTGATGATCAAGGAGTGAAGTAATT...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTAAGGTGTAGACAGGGCTaGTATTCAGATGGTCTATGC +
Preference number: 4 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLRCRQG*YSDGLC
Trigger: GCATAGACCATCTGAATATCAGCCCTGTCTACACCT...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTATCCAGCCCCCAAACATaGCTTCACATCACTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVSSPQT*LHITVQ
Trigger: CTGAACAGTGATGTGAAGTCATGTTTGGGGGCTGGA...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTTATCTCCCCAAGTATTaGACATACAACAGGACAAAC +
Preference number: 4 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPYLPKY*TYNRTN
Trigger: GTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATA...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTATTGTCACTGAGACGGTaGACAAAGATCAGGTCATTC +
Preference number: 4 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVLSLRR*TKIRSF
Trigger: GAATGACCTGATCTTTGTTCACCGTCTCAGTGACAA...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCATTTCTGATAGGTCAATaGACAAAAACGGTAACTCCT +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSFLIGQ*TKTVTP
Trigger: AGGAGTTACCGTTTTTGTTCATTGACCTATCAGAAA...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAAAGCTAGCCTAAAATaGAAATGTTTGGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLKASLK*KCLEPP
Trigger: TGGTGGCTCCAAACATTTTCATTTTAGGCTAGCTTT...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATAAGAACGGTAGCCAGATaGACCGTGGAACAACCACAT +
Preference number: 4 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLIRTVAR*TVEQPH
Trigger: ATGTGGTTGTTCCACGGTTCATCTGGCTACCGTTCT...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGTGCAAGCTGCAGGCGTaGAATCTTCATGCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGCKLQA*NLHASG
Trigger: TCCACTTGCATGAAGATTGCACGCCTGCAGCTTGCA...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR GCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTAGGCTCCAGGTCATCTaGCTTCACCTCAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSRLQVI*LHLKVL
Trigger: CAGAACTTTGAGGTGAAGGCAGATGACCTGGAGCCT...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTTTAGTCTCCAAGAATCAACCCTCCCGAAACAGTaGGCCATAAAAGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: IHSRVNRLSPLLFSLQESTLPKQ*AIKGDS
Trigger: ACTGTCACCTTTTATGGCGCACTGTTTCGGGAGGGT...TGATTCTTGGAGACTAAAAAGCAGTGGACTTAATCGGTTGACCCTACTGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS-3UTR GCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTACCCTCCCGAAACAGTaGGCCATAAAAGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: LYLALISPSIEHTTGQTTTLPKQ*AIKGDS
Trigger: ACTGTCACCTTTTATGGCGCACTGTTTCGGGAGGGT...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAGTATGGTTTGCAACCTaGATCAATTGTTTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSVWFAT*INCFSN
Trigger: GTTGCTAAAACAATTGATGCAGGTTGCAAACCATAC...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAATGCAGAGAACTTGTCTaGTGGGAGTTGTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKCRELV*WELWRW
Trigger: CCATCGCCACAACTCCCAGCAGACAAGTTCTCTGCA...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCACAGTTTTACAAAAGATaGCACATCTGTTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSQFYKR*HICSFG
Trigger: TCCAAAGGAACAGATGTGGCATCTTTTGTAAAACTG...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATAGCTGCTGAAGAAAGATaGGGCCTCAACGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLIAAEER*GLNATC
Trigger: ACAAGTTGCGTTGAGGCCGCATCTTTCTTCAGCAGC...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTAGGCGTGAGTCACCATaGTCAGCCAATGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSRRESP*SANAGN
Trigger: ATTTCCAGCATTGGCTGAGCATGGTGACTCACGCCT...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACAGCATAATGTATGTTTaGCTAATGGTGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNSIMYV*LMVQQE
Trigger: TTCCTGCTGCACCATTAGGCAAACATACATTATGCT...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAGATACCCAACCTTGCTaGTCATCTTTAAAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLDTQPC*SSLKEV
Trigger: AACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATC...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACTCAGATACCCAACCTTaGTGCTCATCTTTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNSDTQP*CSSLKE
Trigger: TTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGA...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTCCAACCAGAAAAAGCTaGACCTGGCAGGAAAGATGG +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSPTRKS*TWQERW
Trigger: CCATCTTTCCTGCCAGGTGCAGCTTTTTCTGGTTGG...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGAGCCGTTTCTGTTCCTaGCTATTTACTGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGSRFCS*LFTVAR
Trigger: CCGAGCCACAGTAAATAGCCAGGAACAGAAACGGCT...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTCCTCTGGAATTGTCTaGCCTTTATCAATAACTTGT +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLSSGIV*PLSITC
Trigger: ACAAGTTATTGATAAAGGCCAGACAATTCCAGAGGA...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATGTCTGCTGGGAGTTGTaGCGATGGCTCCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDVCWEL*RWLLYH
Trigger: GTGGTAGAGGAGCCATCGCCACAACTCCCAGCAGAC...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTCGTTTCCATTTCAGATaGCTTAACTGTGATAAAAGC +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLRFHFR*LNCDKS
Trigger: GCTTTTATCACAGTTAAGCCATCTGAAATGGAAACG...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCACAATGTAAATTTTCCTaGGGAAAAGGTCCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSQCKFS*GKGPSF
Trigger: AAAGCTAGGACCTTTTCCCCAGGAAAATTTACATTG...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTAAGAAAAAGCTGCACCTaGCAGGAAAGATGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVRKSCT*QERWEP
Trigger: AGGCTCCCATCTTTCCTGCCAGGTGCAGCTTTTTCT...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTTCGCACATCTTCACTTaGCCGAGAGCATTGATGAGT +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSSHIFT*PRALMS
Trigger: ACTCATCAATGCTCTCGGTCAAGTGAAGATGTGCGA...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGTCGCACATCTTCACTTaGCCGAGAGCATTGATGAGT +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGSHIFT*PRALMS
Trigger: ACTCATCAATGCTCTCGGTCAAGTGAAGATGTGCGA...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTACCTGTTTGAGCTGCTaGAATGGAGTTCCCCATGAA +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSTCLSC*NGVPHE
Trigger: TTCATGGGGAACTCCATTTCAGCAGCTCAAACAGGT...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTGCTAGGAACTCCCAATaGAGCTCATCTCCTATAGAG +
Preference number: 4 (lower is better)
Translates to: LYLALISPSIEHTTGQTTARNSQ*SSSPIE
Trigger: CTCTATAGGAGATGAGCTTCATTGGGAGTTCCTAGC...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAGTGGAAATCTTCATTTaGAATTATCTTCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLVEIFI*NYLQSP
Trigger: TGGGCTCTGAAGATAATTTCAAATGAAGATTTCCAC...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTATCATAGAAGATAGGTaGCTTTCACTTGCAAAATCC +
Preference number: 4 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPIIEDR*LSLAKS
Trigger: GGATTTTGCAAGTGAAAGTCACCTATCTTCTATGAT...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACAATAATGTGGAGAGTTaGGTGGCCAAGAATTTCATT +
Preference number: 4 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNNNVES*VAKNFI
Trigger: AATGAAATTCTTGGCCACTCAACTCTCCACATTATT...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATAAGTCTTCTGTCGCAGTaGGAACAGGGAGCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLISLLSQ*EQGALR
Trigger: TCTTAAAGCTCCCTGTTCTCACTGCGACAGAAGACT...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTAGAAGCCAGATATTCTaGCTGGAGGTTGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSRSQIF*LEVDRG
Trigger: ACCTCTGTCAACCTCCAGTCAGAATATCTGGCTTCT...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTAAAATTCCACTGCATATaGAGAGCCCAGTCACTCCAC +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVKFHCI*RAQSLH
Trigger: GTGGAGTGACTGGGCTCTTCATATGCAGTGGAATTT...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTATGTGTACAAGGCACCTaGTATGACTCAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVCVQGT*YDSAGV
Trigger: AACACCAGCTGAGTCATATCAGGTGCCTTGTACACA...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAGATAGGAAGTCAACGTaGAAGTTCCTCATTAAAAGA +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLDRKST*KFLIKR
Trigger: TCTTTTAATGAGGAACTTTCACGTTGACTTCCTATC...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGATGCAGAGAACTTGTCTaGTGGGAGTTGTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRCRELV*WELWRW
Trigger: CCATCGCCACAACTCCCAGCAGACAAGTTCTCTGCA...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR GCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACCAGTTTTACAAAAGATaGCACATCTGTTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNQFYKR*HICSFG
Trigger: TCCAAAGGAACAGATGTGGCATCTTTTGTAAAACTG...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR GCA 90 bp AGCTCTGGGTATGTAGGCCGTTCTTTGGAATTCTTCTTTAAGCACTGTGAGGTAGATTGGGCAGATGTTTaGAAAAATGGCAGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SSGYVGRSLEFFFKHCEVDWADV*KNGSSH
Trigger: GTGACTGCTGCCATTTTTGCAAACATCTGCCCAATC...TACCTCACAGTGCTTAAAGAAGAATTCCAAAGAACGGCCTACATACCCAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS-3UTR GCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTGTATTGCGTATAGATaGTTTCATGATACAACAGCA +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLCIAYR*FHDTTA
Trigger: TGCTGTTGTATCATGAAAGCATCTATACGCAATACA...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAAAAAACGGTAACTCCTaGCTCTGCAAACCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVKNGNS*LCKPRD
Trigger: ATCTCTAGGTTTGCAGAGGCAGGAGTTACCGTTTTT...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGCACCTACAACACCTTTaGAAAAGGCAGCAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGHLQHL*KRQQGV
Trigger: TACCCCTTGCTGCCTTTTGCAAAGGTGTTGTAGGTG...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGGAGGTGGTGTGGAACTaGTCTGAGGTTGTTCAAATG +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGEVVWN*SEVVQM
Trigger: CATTTGAACAACCTCAGACCAGTTCCACACCACCTC...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTATCCTCTGGAATTGTCTaGCCTTTATCAATAACTTGT +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLSSGIV*PLSITC
Trigger: ACAAGTTATTGATAAAGGCCAGACAATTCCAGAGGA...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTCAAAAGTTGGTTGATTaGCACTTACAACACAGTTTT +
Preference number: 4 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLQKLVD*HLQHSF
Trigger: AAAACTGTGTTGTAAGTGCCAATCAACCAACTTTTG...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACAGATTACACTTATTCTaGTGGAAGAATGACTCTGGT +
Preference number: 4 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNRLHLF*WKNDSG
Trigger: ACCAGAGTCATTCTTCCACCAGAATAAGTGTAATCT...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAACTGGAGAAAGCTATaGAGCACATCAAGATTAACT +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLNWRKL*STSRLT
Trigger: AGTTAATCTTGATGTGCTCCATAGCTTTCTCCAGTT...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGGATCTATAATGCATaGCTGTCATACAACAATTCC +
Preference number: 4 (lower is better)
Translates to: SELASPRNPPIHSRVNRLRIYNA*LSYNNS
Trigger: GGAATTGTTGTATGACAGCCATGCATTATAGATCCT...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 72 bp TTCCCCAATCTCAGTACAAGTCAGGGAATAGAGAGATaGACTAGTGTCTGGGTTCGTGATTCTCCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: FPNLSTSQGIER*TSVWVRDSPCV
Trigger: TACACAAGGAGAATCACGAACCCAGACACTAGTCAATCTCTCTATTCCCTGACTTGTACTGAGATTGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAAGGCTTGACGTCTCTGTaGATGACAGACAGCTTACTA +
Preference number: 4 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKGLTSL*MTDSLL
Trigger: TAGTAAGCTGTCTGTCATTCACAGAGACGTCAAGCC...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGACCAGAGACACTACTTTaGAGTGCTGGAGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRPETLL*SAGGGF
Trigger: AAACCCACCTCCAGCACTTCAAAGTAGTGTCTCTGG...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTTTAGTCTCCAAGAATCAGTTTTGCAACAAAGATaGAAGCTGCAGGCGTGCAAT +
Preference number: 4 (lower is better)
Translates to: IHSRVNRLSPLLFSLQESVLQQR*KLQACN
Trigger: ATTGCACGCCTGCAGCTTGCATCTTTGTTGCAAAAC...TGATTCTTGGAGACTAAAAAGCAGTGGACTTAATCGGTTGACCCTACTGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS-3UTR GCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGGGTAACTCCTGCCTCTaGAAACCTAGAGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGGNSCL*KPRDAK
Trigger: TTTTGCATCTCTAGGTTTGCAGAGGCAGGAGTTACC...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAAGAGGTGGTGTGGAACTaGTCTGAGGTTGTTCAAATG +
Preference number: 4 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKEVVWN*SEVVQM
Trigger: CATTTGAACAACCTCAGACCAGTTCCACACCACCTC...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGAAGCCGTTTCTGTTCCTaGCTATTTACTGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRSRFCS*LFTVAR
Trigger: CCGAGCCACAGTAAATAGCCAGGAACAGAAACGGCT...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR CCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGTTCAGGGGCCATGTATaGTTTGCAACCTGCATCAAT +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGFRGHV*FATCIN
Trigger: ATTGATGCAGGTTGCAAACCATACATGGCCCCTGAA...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACTGGGAGTTGTGGCGATaGCTCCTCTACCACCTGTTT +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHWELWR*LLYHLF
Trigger: AAACAGGTGGTAGAGGAGCCATCGCCACAACTCCCA...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTTGGGAGTTGTGGCGATaGCTCCTCTACCACCTGTTT +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLWELWR*LLYHLF
Trigger: AAACAGGTGGTAGAGGAGCCATCGCCACAACTCCCA...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAGAGAACTTGTCTGCTaGGAGTTGTGGCGATGGCTC +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLRELVC*ELWRWL
Trigger: GAGCCATCGCCACAACTCCCAGCAGACAAGTTCTCT...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACATGATGGGCCAGGGCTaGCAGCTAAAAGCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHMMGQG*QLKAPN
Trigger: GTTTGGAGCTTTTAGCTGCCAGCCCTGGCCCATCAT...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTATCTCAGAGGAGGGAGTaGATTCTAAAGCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVSQRRE*ILKPFL
Trigger: CAGAAAAGGCTTTAGAATCCACTCCCTCCTCTGAGA...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAAAATGACCCTGTCTTCTaGCCACCTATCTCCCTATCT +
Preference number: 4 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKNDPVF*PPISLS
Trigger: AGATAGGGAGATAGGTGGCCAGAAGACAGGGTCATT...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTAGCATATACACACATCTaGAGACCAGTTACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLAYTHI*RPVTVS
Trigger: AGACACTGTAACTGGTCTCCAGATGTGTGTATATGC...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 72 bp ATTGGAACACAGCCACCAGGCTCATTCATTTGTGTATaGCGTATAGATGCTTTCATGATACAACAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: IGTQPPGSFICV*RIDAFMIQQQS
Trigger: GCTCTGCTGTTGTATCATGAAAGCATCTATACGCAATACACAAATGAATGAGCCTGGTGGCTGTGTTCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGATCGCACATCTTCACTTaGCCGAGAGCATTGATGAGT +
Preference number: 4 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRSHIFT*PRALMS
Trigger: ACTCATCAATGCTCTCGGTCAAGTGAAGATGTGCGA...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR TCA 90 bp ATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTTTAGTCTCCAAGAATCAAAATGGAGTTCCCCATaGATCATAGGGAAATCGAAG +
Preference number: 4 (lower is better)
Translates to: IHSRVNRLSPLLFSLQESKWSSP*IIGKSK
Trigger: CTTCGATTTCCCTATGATTCATGGGGAACTCCATTT...TGATTCTTGGAGACTAAAAAGCAGTGGACTTAATCGGTTGACCCTACTGTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS-3UTR TCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGAAATGGAGTTCCCCATaGATCATAGGGAAATCGAAG +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGKWSSP*IIGKSK
Trigger: CTTCGATTTCCCTATGATTCATGGGGAACTCCATTT...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTTTGGGAAAAAGAGTATaGCCAGAGCATCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: LYLALISPSIEHTTGQTTLGKRV*PEHLVT
Trigger: AGTGACAAGATGCTCTGGTCATACTCTTTTTCCCAA...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTAAACAGACTGGAAAGTaGTTTTTCCCCCAGTTGCAA +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSKQTGK*FFPQLQ
Trigger: TTGCAACTGGGGGAAAAATCACTTTCCAGTCTGTTT...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTTATCTTCAGAGCCCATaGCATGGCGTTTTACAAAGA +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSYLQSP*HGVLQR
Trigger: TCTTTGTAAAACGCCATGTCATGGGCTCTGAAGATA...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGCTCAAATTCCTGACCTaGGGTGATCCACCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKLKFLT*GDPPAS
Trigger: TGAGGCAGGTGGATCACCTCAGGTCAGGAATTTGAG...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGCTGGTCTCAAATTCCTaGCCTGAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKLVSNS*PEVIHL
Trigger: CAGGTGGATCACCTCAGGTCAGGAATTTGAGACCAG...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAAAGTCCTCATCCTTTCTaGATCCAGTTTCCTATGTCC +
Preference number: 4 (lower is better)
Translates to: STLTTKAILTTYTWQEGQSPHPF*IQFPMS
Trigger: GGACATAGGAAACTGGATTCAGAAAGGATGAGGACT...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACGCCTTCTTCTACGTTTaGGGTAAGTCTGACCTCCCA +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHAFFYV*GKSDLP
Trigger: TGGGAGGTCAGACTTACCTCAAACGTAGAAGAAGGC...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGTGGGACAGCACAAAATaGGTAGGCCTGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRWDSTK*VGLSLL
Trigger: CAGAAGACTCAGGCCTACTCATTTTGTGCTGTCCCA...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATAAACAGAAAAGACTTTTaGAGGCCTGGTCTAAGCTAC +
Preference number: 4 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLINRKDF*RPGLSY
Trigger: GTAGCTTAGACCAGGCCTTCAAAAGTCTTTTCTGTT...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGCCTCAGGGGCACCACTaGATATGGTCTGAAAACCAC +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKPQGHH*IWSENH
Trigger: GTGGTTTTCAGACCATATTCAGTGGTGCCCCTGAGG...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACTCCACGCCTTGTCACTaGGACGGTGAACAAAGATCA +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHSTPCH*DGEQRS
Trigger: TGATCTTTGTTCACCGTCTCAGTGACAAGGCGTGGA...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGATCCTGAGGCCTTATTaGAGTTATCACTTGATGCTC +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGILRPY*SYHLML
Trigger: GAGCATCAAGTGATAACTTCAATAAGGCCTCAGGAT...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTACAACACACACGGTGTaGAGTTTTACACGCATATAC +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSTTHTV*SFTRIY
Trigger: GTATATGCGTGTAAAACTTCACACCGTGTGTGTTGT...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGAAAGTCAACAAACTCTaGAGAGAACTTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGKVNKL*RELVCW
Trigger: CCAGCAGACAAGTTCTCTGCAGAGTTTGTTGACTTT...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTACAGTTTTACAAAAGATaGCACATCTGTTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVQFYKR*HICSFG
Trigger: TCCAAAGGAACAGATGTGGCATCTTTTGTAAAACTG...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTATGGCATGTTACTCCCTaGAAATGTTCAAAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVWHVTP*KCSKES
Trigger: ACTTTCTTTTGAACATTTGCAGGGAGTAACATGCCA...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTTATTTGGTGGCAATGTaGTTCCCCTGGAAGGATAAT +
Preference number: 4 (lower is better)
Translates to: LYLALISPSIEHTTGQTTYLVAM*FPWKDN
Trigger: ATTATCCTTCCAGGGGAAGCACATTGCCACCAAATA...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATATATGGGAAAGAAGCTTaGTCATCAGGTAACCTTCTC +
Preference number: 4 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLIYGKEA*SSGNLL
Trigger: GAGAAGGTTACCTGATGAGCAAGCTTCTTTCCCATA...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAATTTGAAAGACAGGGGTaGATAGGACCTCTCCGATAT +
Preference number: 4 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKFERQG*IGPLRY
Trigger: ATATCGGAGAGGTCCTATGCACCCCTGTCTTTCAAA...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAACTCTACAGTTCAGCCTaGCTCATTCACAAAGAGACA +
Preference number: 4 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKLYSSA*LIHKET
Trigger: TGTCTCTTTGTGAATGAGGCAGGCTGAACTGTAGAG...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTCAGGGTTTCGCTTCTTaGCCTGAATTTACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLQGFAS*PEFTAS
Trigger: GGAGGCAGTAAATTCAGGGCAAGAAGCGAAACCCTG...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589647.5
CDS-3UTR CCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACAGCCGTTTCTGTTCCTaGCTATTTACTGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHSRFCS*LFTVAR
Trigger: CCGAGCCACAGTAAATAGCCAGGAACAGAAACGGCT...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAATTCAGGGGCCATGTATaGTTTGCAACCTGCATCAAT +
Preference number: 4 (lower is better)
Translates to: STLTTKAILTTYTWQEGQFRGHV*FATCIN
Trigger: ATTGATGCAGGTTGCAAACCATACATGGCCCCTGAA...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGACTTACAACTTACACATaGCAGGAGGGACAAACGCAG +
Preference number: 4 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRLTTYT*QEGQTQ
Trigger: CTGCGTTTGTCCCTCCTGCCATGTGTAAGTTGTAAG...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTTTGTTTTTGCAACTTTaGCCTAGGTTCACAGATGGG +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSLFLQL*PRFTDG
Trigger: CCCATCTGTGAACCTAGGCCAAAGTTGCAAAAACAA...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTGAAAGCTTCGGTCACTaGCAGACTGTCCTTTTTATA +
Preference number: 4 (lower is better)
Translates to: LYLALISPSIEHTTGQTTESFGH*QTVLFI
Trigger: TATAAAAAGGACAGTCTGCCAGTGACCGAAGCTTTC...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTAAGACTTTTGAAGGCCTaGTCTAAGCTACAAACTCCA +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVRLLKA*SKLQTP
Trigger: TGGAGTTTGTAGCTTAGACCAGGCCTTCAAAAGTCT...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAATCAAACCTCCTCAAGTaGCTTTTATGCAGATTGGCC +
Preference number: 4 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKSNLLK*LLCRLA
Trigger: GGCCAATCTGCATAAAAGCCACTTGAGGAGGTTTGA...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTGGCTTGACGTCTCTGTaGATGACAGACAGCTTACTA +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLGLTSL*MTDSLL
Trigger: TAGTAAGCTGTCTGTCATTCACAGAGACGTCAAGCC...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTCCAACTCAATCATCGTaGTGCCCAGACTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLPTQSS*CPDSKC
Trigger: ACATTTGGAGTCTGGGCATCACGATGATTGAGTTGG...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTACCTGTTTGAGCTGCTaGAATGGAGTTCCCCATGAA +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLTCLSC*NGVPHE
Trigger: TTCATGGGGAACTCCATTTCAGCAGCTCAAACAGGT...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACCTTGTGTGCAGTTCATaGCAGATACACCACCATAGC +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHLVCSS*QIHHHS
Trigger: GCTATGGTGGTGTATCTGTCATGAACTGCACACAAG...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTACAAGGCACCTGATATaGCTCAGCTGGTGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLTRHLI*LSWCLS
Trigger: GCTTAAACACCAGCTGAGTCATATCAGGTGCCTTGT...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTCAAAAGACTTTGCCTTaGTTCTCTTCTGTAGCTAGT +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSQKTLP*FSSVAS
Trigger: ACTAGCTACAGAAGAGAAGCAAGGCAAAGTCTTTTG...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTGTTTCTCTTGACCGATaGAGCAGATGGACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLVSLDR*SRWTFR
Trigger: CCTGAAAGTCCATCTGCTGCATCGGTCAAGAGAAAC...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTACCAGAGAGACAATTTaGTCTACATCGTTCACCAAA +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSTRETI*STSFTK
Trigger: TTTGGTGAACGATGTAGAGCAAATTGTCTCTCTGGT...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTAAGAAAACAAAGGCATaGTGTCCCACAAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: LYLALISPSIEHTTGQTTKKTKA*CPTKQV
Trigger: TACCTGTTTTGTGGGACAGCATGCCTTTGTTTTCTT...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTCTTCTGGTTGAGCTCTaGGTTTATTCTTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLLLVEL*VYSFRG
Trigger: GCCCCTGAAAGAATAAACCCAGAGCTCAACCAGAAG...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACCTTCTGGTTGAGCTCTaGGTTTATTCTTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHLLVEL*VYSFRG
Trigger: GCCCCTGAAAGAATAAACCCAGAGCTCAACCAGAAG...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAAAGCAGTCACAACAGCTaGAACAGACATTTCACAAGA +
Preference number: 4 (lower is better)
Translates to: STLTTKAILTTYTWQEGQSSHNS*NRHFTR
Trigger: TCTTGTGAAATGTCTGTTCCAGCTGTTGTGACTGCT...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGTTCACAGCTCCCAGATaGTTCCAATGTACACGAGGG +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKFTAPR*FQCTRG
Trigger: CCCTCGTGTACATTGGAACCATCTGGGAGCTGTGAA...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAATCAAGATGGCTACTCTaGTGGGCAATATTCACTCAT +
Preference number: 4 (lower is better)
Translates to: STLTTKAILTTYTWQEGQSRWLL*WAIFTH
Trigger: ATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTAGCAATGTGCTTCCCCTaGAAGGATAATTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVAMCFP*KDNFIL
Trigger: CAAAATGAAATTATCCTTCCAGGGGAAGCACATTGC...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTATGCAAAAGTGTAAACTaGAGAAAGCTATGGAGCACA +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVCKSVN*RKLWST
Trigger: TGTGCTCCATAGCTTTCTCCAGTTTACACTTTTGCA...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTCTCCTAACTAGCTTATaGAACTACCTCATTCTAGCA +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSLLTSL*NYLILA
Trigger: TGCTAGAATGAGGTAGTTCCATAAGCTAGTTAGGAG...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTGCAAGTCCTGCATACTaGCTATTTCCTTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLASPAY*LFPWLW
Trigger: CCAAAGCCAAGGAAATAGCCAGTATGCAGGACTTGC...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTTTAGTCTCCAAGAATCATGGATTCATGTAGGGTaGAAAATGGATGTTGCATTA +
Preference number: 4 (lower is better)
Translates to: IHSRVNRLSPLLFSLQESWIHVG*KMDVAL
Trigger: TAATGCAACATCCATTTTTCACCCTACATGAATCCA...TGATTCTTGGAGACTAAAAAGCAGTGGACTTAATCGGTTGACCCTACTGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS-3UTR TCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGTGGATTCATGTAGGGTaGAAAATGGATGTTGCATTA +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGWIHVG*KMDVAL
Trigger: TAATGCAACATCCATTTTTCACCCTACATGAATCCA...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGTGTCCCCCTCAAAACTaGCAATTGTCCTCCTTACCA +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKCPPQN*QLSSLP
Trigger: TGGTAAGGAGGACAATTGTCAGTTTTGAGGGGGACA...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTATTTTCAAAAGTTGGTTaGTTGGCACTTACAACACAG +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVFSKVG*LALTTQ
Trigger: CTGTGTTGTAAGTGCCAATCAACCAACTTTTGAAAA...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTATTGAGGTGGCTAAGTTaGAAAAGGTTAAGAACTCTA +
Preference number: 4 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVLRWLS*KRLRTL
Trigger: TAGAGTTCTTAACCTTTTTCAACTTAGCCACCTCAA...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAAATCTGGGTCAGAAACTaGAAAGATTACCTTCCACTA +
Preference number: 4 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKIWVRN*KDYLPL
Trigger: TAGTGGAAGGTAATCTTTTCAGTTTCTGACCCAGAT...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTTTTGGCTTACTTTGTTaGAATATCTTGCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LYLALISPSIEHTTGQTTFGLLC*NILQTP
Trigger: TGGAGTCTGCAAGATATTTCAACAAAGTAAGCCAAA...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAATCCGTAAAGAAGAGATaGTTCCAACCAGAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: STLTTKAILTTYTWQEGQSVKKR*FQPEKA
Trigger: AGCTTTTTCTGGTTGGAATCATCTCTTCTTTACGGA...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGTACTTCCTTGTCTACTaGCTGATAGAAGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGYFLVY*LIEVNH
Trigger: ATGATTGACTTCTATCAGTCAGTAGACAAGGAAGTA...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAACAAAGATGCAAGCTaGAGGCGTGCAATCTTCATG +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLNKDAS*RRAIFM
Trigger: CATGAAGATTGCACGCCTGCAGCTTGCATCTTTGTT...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR GCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGGTATGGTTTGCAACCTaGATCAATTGTTTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGVWFAT*INCFSN
Trigger: GTTGCTAAAACAATTGATGCAGGTTGCAAACCATAC...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTGATTGGGCAGATGTTTaGAAAAATGGCAGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLDWADV*KNGSSH
Trigger: GTGACTGCTGCCATTTTTGCAAACATCTGCCCAATC...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR GCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGGATTTTTCCCCCAGTTaGAACGTTAGGGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKDFSPS*NVREGC
Trigger: ACAGCCTTCCCTAACGTTGCAACTGGGGGAAAAATC...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAATATTCAGATGGTCTATaGTGGTGGGGCATTAACTAT +
Preference number: 4 (lower is better)
Translates to: STLTTKAILTTYTWQEGQYSDGL*WWGINY
Trigger: ATAGTTAATGCCCCACCAGCATAGACCATCTGAATA...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAAACCAACAGCAGACAGTaGAAACATTGGCATAATAGA +
Preference number: 4 (lower is better)
Translates to: STLTTKAILTTYTWQEGQTNSRQ*KHWHNR
Trigger: TCTATTATGCCAATGTTTGCACTGTCTGCTGTTGGT...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTTTTAGCACCAACCTTTaGATTTATCACTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSFSTNL*IYHFFQ
Trigger: CTGGAAGAAGTGATAAATGCAAAGGTTGGTGCTAAA...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAAAATGCTTATATCTACTaGAAGTCCTGCATACTGGCT +
Preference number: 4 (lower is better)
Translates to: STLTTKAILTTYTWQEGQNAYIY*KSCILA
Trigger: AGCCAGTATGCAGGACTTGCAGTAGATATAAGCATT...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGTCCTCTGGAATTGTCTaGCCTTTATCAATAACTTGT +
Preference number: 4 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGSSGIV*PLSITC
Trigger: ACAAGTTATTGATAAAGGCCAGACAATTCCAGAGGA...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CCA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGAAGCAGTCACAACAGCTaGAACAGACATTTCACAAGA +
Preference number: 4 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRSSHNS*NRHFTR
Trigger: TCTTGTGAAATGTCTGTTCCAGCTGTTGTGACTGCT...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR CCA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAATCAGATGGTCTATGCTaGTGGGGCATTAACTATTTT +
Preference number: 4 (lower is better)
Translates to: STLTTKAILTTYTWQEGQSDGLC*WGINYF
Trigger: AAAATAGTTAATGCCCCACCAGCATAGACCATCTGA...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGAGATGGCTACTCTGGTaGGCAATATTCACTCATACG +
Preference number: 4 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRRWLLW*AIFTHT
Trigger: CGTATGAGTGAATATTGCCCACCAGAGTAGCCATCT...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTAGACAGTGCAAACATTaGCATAATAGATATCTGTGG +
Preference number: 4 (lower is better)
Translates to: LYLALISPSIEHTTGQTTRQCKH*HNRYLW
Trigger: CCACAGATATCTATTATGCCAATGTTTGCACTGTCT...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGTTCACCTCAAGAGCATaGAAACATTCCACCCACATG +
Preference number: 4 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRFTSRA*KHSTHM
Trigger: CATGTGGGTGGAATGTTTCCATGCTCTTGAGGTGAA...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 72 bp ATTCAGATGGTCTATGCTGGTGGGGCATTAACTATTTaGAGGGTCATCCGTGAACACAGATGTCTTTATATA +
Preference number: 4 (lower is better)
Translates to: IQMVYAGGALTI*RVIREHRCLYI
Trigger: TATATAAAGACATCTGTGTTCACGGATGACCCTCAAAATAGTTAATGCCCCACCAGCATAGACCATCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACAAATGGAGTTCCCCATaGATCATAGGGAAATCGAAG +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHKWSSP*IIGKSK
Trigger: CTTCGATTTCCCTATGATTCATGGGGAACTCCATTT...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGAGTCGCATGTTTGGAATaGGGGTTTTGCTTAAACTTT +
Preference number: 4 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRVACLE*GFCLNF
Trigger: AAAGTTTAAGCAAAACCCTCATTCCAAACATGCGAC...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGAAGAGGAGGTCAAGCTTaGTTTAATCTCCCAATTTCA +
Preference number: 4 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRRGGQA*FNLPIS
Trigger: TGAAATTGGGAGATTAAATCAAGCTTGACCTCCTCT...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAAGTCAACAAACTCTaGAGAGAACTTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLKVNKL*RELVCW
Trigger: CCAGCAGACAAGTTCTCTGCAGAGTTTGTTGACTTT...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATAAAGTCAACAAACTCTaGAGAGAACTTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDKVNKL*RELVCW
Trigger: CCAGCAGACAAGTTCTCTGCAGAGTTTGTTGACTTT...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAACAGTTTTACAAAAGATaGCACATCTGTTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: STLTTKAILTTYTWQEGQQFYKR*HICSFG
Trigger: TCCAAAGGAACAGATGTGGCATCTTTTGTAAAACTG...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTACGAGAAAGAACTTTTaGTGTTTAGTCAACTTGCTA +
Preference number: 4 (lower is better)
Translates to: LYLALISPSIEHTTGQTTTRKNF*CLVNLL
Trigger: TAGCAAGTTGACTAAACAGCAAAAGTTCTTTCTCGT...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGATCTACTGCAAGTCCTaGATACTGGCTATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRIYCKS*ILAISL
Trigger: CAAGGAAATAGCCAGTATGCAGGACTTGCAGTAGAT...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGAGTCCACCGTCCTCATaGAAATATCCAAATCCATCA +
Preference number: 4 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRSPPSS*KYPNPS
Trigger: TGATGGATTTGGATATTTCCATGAGGACGGTGGACT...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTTCCTGTTTTCATAGGTaGGTGAATAAAGTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LYLALISPSIEHTTGQTTSCFHR*VNKVRN
Trigger: ATTCCTTACTTTATTCACCCACCTATGAAAACAGGA...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAACTTCCCCATAATTCATaGCTTCTGAAACTTCAAACT +
Preference number: 4 (lower is better)
Translates to: STLTTKAILTTYTWQEGQLPHNS*LLKLQT
Trigger: AGTTTGAAGTTTCAGAAGCCATGAATTATGGGGAAG...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGTTTCAGAGGCCTAATTaGAAACTGCACCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRFQRPN*KLHLPF
Trigger: AAATGGAAGGTGCAGTTTTCAATTAGGCCTCTGAAA...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTCAAAAGACTTTGCCTTaGTTCTCTTCTGTAGCTAGT +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLQKTLP*FSSVAS
Trigger: ACTAGCTACAGAAGAGAAGCAAGGCAAAGTCTTTTG...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR GCA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGAGTTTTTGTTACTTTCTaGAATGGCATGTTACTCCCT +
Preference number: 4 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRVFVTF*NGMLLP
Trigger: AGGGAGTAACATGCCATTGCAGAAAGTAACAAAAAC...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGAGGCCTAATTGAAAACTaGACCTTCCATTTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRGLIEN*TFHLKS
Trigger: ACTTTTCAAATGGAAGGTGCAGTTTTCAATTAGGCC...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACGTTAAGAACTCTATCTaGCTTCTTCTACGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHVKNSI*LLLRLR
Trigger: CCTCAAACGTAGAAGAAGGCAGATAGAGTTCTTAAC...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGTTAAATCCAAATCTCTaGTGGCTGGAACATTGGCAG +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKLNPNL*WLEHWQ
Trigger: CTGCCAATGTTCCAGCCACCAGAGATTTGGATTTAA...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACTACTGGCTATTTCCTTaGCTTTGGGATTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHYWLFP*LWDLEI
Trigger: TATCTCCAAATCCCAAAGCCAAGGAAATAGCCAGTA...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 72 bp AAGTTTTATTGGAACACAGCCACCAGGCTCATTCATTaGTGTATTGCGTATAGATGCTTTCATGATACAACA +
Preference number: 4 (lower is better)
Translates to: KFYWNTATRLIH*CIAYRCFHDTT
Trigger: TGTTGTATCATGAAAGCATCTATACGCAATACACAAATGAATGAGCCTGGTGGCTGTGTTCCAATAAAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 72 bp CAGCAACAATCCCCTAAGATAGTGGTTTGGCTTACTTaGTTGAAATATCTTGCAGACTCCAACACAAATATT +
Preference number: 4 (lower is better)
Translates to: QQQSPKIVVWLT*LKYLADSNTNI
Trigger: AATATTTGTGTTGGAGTCTGCAAGATATTTCAACAAAGTAAGCCAAACCACTATCTTAGGGGATTGTTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 72 bp GACCTACATACTTGTAAGGCAAAATTACCCTCACCTTaGGCAATTATTATACTTCCTTGTCTACTGACTGAT +
Preference number: 4 (lower is better)
Translates to: DLHTCKAKLPSP*AIIILPCLLTD
Trigger: ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGCCTTACAAGTATGTAGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGATGACTTTCTATTaGTGCTGTAGTGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLKMTFY*CCSELA
Trigger: AGCAAGTTCACTACAGCATCAATAGAAAGTCATCTT...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR TCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGTTTGAGGGTCATCCGTaGACACAGATGTCTTTATAT +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKFEGHP*TQMSLY
Trigger: ATATAAAGACATCTGTGTTCACGGATGACCCTCAAA...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTCATAGCTGTAAACAGTaGCTTTCTAAACCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLHSCKQ*LSKPQK
Trigger: TTTCTGAGGTTTAGAAAGTCACTGTTTACAGCTATG...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGGTTCAGCCATCTGTCTaGAAAGGTAACTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKVQPSV*KGNSFK
Trigger: TTTGAAAGAGTTACCTTTTCAGACAGATGGCTGAAC...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATACATTCACAGTTCTCTaGATTATGGGAAAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDTFTVL*IMGKKL
Trigger: AAGCTTCTTTCCCATAATTCAGAGAACTGTGAATGT...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTGTATGGTTTGCAACCTaGATCAATTGTTTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLVWFAT*INCFSN
Trigger: GTTGCTAAAACAATTGATGCAGGTTGCAAACCATAC...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR GCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGTATACAGAAAAAGTTTaGCAACCGTGGTCTAGGATG +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKYTEKV*QPWSRM
Trigger: CATCCTAGACCACGGTTGGCAAACTTTTTCTGTATA...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGCGTGGAACAACCACATaGTTTAATATCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKRGTTT*FNISAV
Trigger: AACAGCTGAGATATTAAACCATGTGGTTGTTCCACG...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGAAGATGACTTTCTATTaGTGCTGTAGTGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKKMTFY*CCSELA
Trigger: AGCAAGTTCACTACAGCATCAATAGAAAGTCATCTT...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR TCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGAAGCACAAAGAAAGCTaGAGAAATCCACCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKKHKES*RNPPLL
Trigger: TAAAAGAGGTGGATTTCTTCAGCTTTCTTTGTGCTT...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACAAATATAGTGATATATaGAGGACACTGTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHKYSDI*RTLCKL
Trigger: CAGTTTGCACAGTGTCCTGCATATATCACTATATTT...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGTCAAATACTTCAATATaGCCTGTTAAGGAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRSNTSI*PVKEFP
Trigger: TGGAAACTCCTTAACAGGGCATATTGAAGTATTTGA...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGCCCAAAGGCTCTCTTTaGAATAAACATGGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKPKGSL*NKHGLK
Trigger: TTTCAAACCATGTTTATTGCAAAGAGAGCCTTTGGG...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGAACATTCCACCCACATaGTTTACAGGTCTTTACTTT +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKNIPPT*FTGLYF
Trigger: AAAGTAAAGACCTGTAAAGCATGTGGGTGGAATGTT...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CCA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACATGCTCAGCCAATGCTaGAAATTTTTAAGGGAAATA +
Preference number: 4 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHMLSQC*KFLREI
Trigger: TATTTCCCTTAAAAATTTCCAGCATTGGCTGAGCAT...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
3UTR CAA 72 bp GGAGTTTCCAAGTATCATTCTAAGCATAATGTATGTTaGCCTAATGGTGCAGCAGGAAAAAGAATATTTCTG +
Preference number: 4 (lower is better)
Translates to: GVSKYHSKHNVC*PNGAAGKRIFL
Trigger: CAGAAATATTCTTTTTCCTGCTGCACCATTAGGCAAACATACATTATGCTTAGAATGATACTTGGAAACTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR GCA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGCTTGTCCAAAAGCAATaGTTCCTGGTTATTTATCAT +
Preference number: 4 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKLVQKQ*FLVIYH
Trigger: ATGATAAATAACCAGGAAGCATTGCTTTTGGACAAG...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS GCA 90 bp GTGGCTCGGATCCGCTTCACTGCCATGATCTGCCCGCTGGGCACGTaGCGCATCTTCTCCACCACCCCGTACGCACCTCGTCCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: VARIRFTAMICPLGT*RIFSTTPYAPRPSS
Trigger: GGAACTGGGACGAGGTGCGTACGGGGTGGTGGAGAAGATGCGGCACGTGCCCAGCGGGCAGATCATGGCAGTGAAGCGGATCCGAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586641.5
ENST00000588110.5
ENST00000589295.5
ENST00000589647.5
ENST00000590474.7
ENST00000591445.1
ENST00000613873.4
CDS-3UTR CAA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTGTCTGCTGGGAGTaGTGGCGATGGCTCCTCTAC +
Preference number: 5 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLLVCWE*WRWLLY
Trigger: GTAGAGGAGCCATCGCCACAACTCCCAGCAGACAAG...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCACTTGTCTGCTGGGAGTaGTGGCGATGGCTCCTCTAC +
Preference number: 5 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSLVCWE*WRWLLY
Trigger: GTAGAGGAGCCATCGCCACAACTCCCAGCAGACAAG...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGGGTAGCTCTGTTAGCTaGAGTCTCAGACCGTACCCC +
Preference number: 5 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLGSSVS*SLRPYP
Trigger: GGGGTACGGTCTGAGACTCAAGCTAACAGAGCTACC...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTACTTGTCTGCTGGGAGTaGTGGCGATGGCTCCTCTAC +
Preference number: 5 (lower is better)
Translates to: SELASPRNPPIHSRVNRLLVCWE*WRWLLY
Trigger: GTAGAGGAGCCATCGCCACAACTCCCAGCAGACAAG...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGAACTCTGCAGAGAACTaGTCTGCTGGGAGTTGTGGC +
Preference number: 5 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLNSAEN*SAGSCG
Trigger: GCCACAACTCCCAGCAGACAAGTTCTCTGCAGAGTT...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCCAGGGTTTCGCTTCTaGCCTGAATTTACTGCCTCC +
Preference number: 5 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLPGFRF*PEFTAS
Trigger: GGAGGCAGTAAATTCAGGCAAGAAGCGAAACCCTGG...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613873.4
CDS-3UTR CAA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTGATGCTGTAGTGAACTaGCTTCACCCCGAAACCCAC +
Preference number: 5 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLDAVVN*LHPETH
Trigger: GTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTAACTCTGCAGAGAACTaGTCTGCTGGGAGTTGTGGC +
Preference number: 5 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPNSAEN*SAGSCG
Trigger: GCCACAACTCCCAGCAGACAAGTTCTCTGCAGAGTT...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACGATGCTGTAGTGAACTaGCTTCACCCCGAAACCCAC +
Preference number: 5 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNDAVVN*LHPETH
Trigger: GTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR CAA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACCAAGTGGAGTTTCTCTaGACCGATGCAGCAGATGGA +
Preference number: 5 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNQVEFL*TDAADG
Trigger: TCCATCTGCTGCATCGGTCAAGAGAAACTCCACTTG...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR CAA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAATCGCACATCTTCACTaGACCGAGAGCATTGATGAG +
Preference number: 5 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSIAHLH*TESIDE
Trigger: CTCATCAATGCTCTCGGTCAAGTGAAGATGTGCGAT...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAGGGGCCATGTATGGTTaGCAACCTGCATCAATTGTT +
Preference number: 5 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSGAMYG*QPASIV
Trigger: AACAATTGATGCAGGTTGCAAACCATACATGGCCCC...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS TCA 90 bp TCTCATGTCTCCATTCAAAGCGCCACTTCCTACCCAGGAAGTCTGTaGGTGTTAAGAACCCAAGCACCAGGTAGGACAGAGCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: SHVSIQSATSYPGSL*VLRTQAPGRTELLK
Trigger: TTTGAGAAGCTCTGTCCTACCTGGTGCTTGGGTTCTTAACACTCACAGACTTCCTGGGTAGGAAGTGGCGCTTTGAATGGAGACATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS-3UTR CAA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAATCGCACATCTTCACTaGACCGAGAGCATTGATGAG +
Preference number: 5 (lower is better)
Translates to: SELASPRNPPIHSRVNRLIAHLH*TESIDE
Trigger: CTCATCAATGCTCTCGGTCAAGTGAAGATGTGCGAT...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTGCCACATCTGTTCCTTaGGATTCATGTAGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLATSVP*DSCRVK
Trigger: TTTCACCCTACATGAATCCAAAGGAACAGATGTGGC...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACTACCGTAGCACCTTTTaGTCAGGGCCAATGCATTCA +
Preference number: 5 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNYRSTF*SGPMHS
Trigger: TGAATGCATTGGCCCTGACAAAAAGGTGCTACGGTA...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR CAA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAGCCAAGAATTTCATTTaGAGGGTCACCAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSAKNFI*RVTNSR
Trigger: TCTGCTGTTGGTGACCCTCAAAATGAAATTCTTGGC...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTAGCTCTAAGACTGGTGTaGGCAAACCATGGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLALRLV*ANHGLW
Trigger: CCACAGGCCATGGTTTGCCAACACCAGTCTTAGAGC...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCAGAAAGGAGGCATTTaGCATAGGCCCCTTAAAATT +
Preference number: 5 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLQKGGI*HRPLKI
Trigger: AATTTTAAGGGGCCTATGCAAAATGCCTCCTTTCTG...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp GCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGTGTTTAAGCATTCCCTaGTGTGCAGTTCATGACAGA +
Preference number: 5 (lower is better)
Translates to: ASPRNPPIHSRVNRLSPLCLSIP*CAVHDR
Trigger: TCTGTCATGAACTGCACACAAGGGAATGCTTAAACA...CAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS TCA 90 bp ATGCAAGCTGCAGGCGTGCAATCTTCATGCAAGTGGAGTTTCTCTTaGCCGATGCAGCAGATGGACTTTCAGGGAATCAAGATGGAAATG +
Preference number: 5 (lower is better)
Translates to: MQAAGVQSSCKWSFS*PMQQMDFQGIKMEM
Trigger: CATTTCCATCTTGATTCCCTGAAAGTCCATCTGCTGCATCGGTCAAGAGAAACTCCACTTGCATGAAGATTGCACGCCTGCAGCTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586641.5
ENST00000590474.7
CDS-3UTR CAA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAGGAGCACAAAAGACTTaGCCTTGCTTCTCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: SELASPRNPPIHSRVNRLGAQKT*PCFSSV
Trigger: TACAGAAGAGAAGCAAGGCAAAGTCTTTTGTGCTCC...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR CAA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCATATGACCAGAGCATCTaGTCACTTCCCCTAAAAGAT +
Preference number: 5 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSYDQSI*SLPLKD
Trigger: ATCTTTTAGGGGAAGTGACAAGATGCTCTGGTCATA...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR CAA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAACCCTCTGTCCTTCCTaGTCCAAAAGCAATGCTTCC +
Preference number: 5 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVTLCPS*SKSNAS
Trigger: GGAAGCATTGCTTTTGGACAAGGAAGGACAGAGGGT...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTCTGGTGGCTGGAACATaGGCAGCGACAGTGTTCACA +
Preference number: 5 (lower is better)
Translates to: LYLALISPSIEHTTGQTTLVAGT*AATVFT
Trigger: TGTGAACACTGTCGCTGCCAATGTTCCAGCCACCAG...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTAAGTGCCTAAACTaGCCAATACGCTCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: SELASPRNPPIHSRVNRLSKCLN*PIRSLN
Trigger: ATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACT...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAATAGAAATGCAAGCCTaGGAGTCTAAATCTCGAGGT +
Preference number: 5 (lower is better)
Translates to: SELASPRNPPIHSRVNRLIEMQA*ESKSRG
Trigger: ACCTCGAGATTTAGACTCCAAGGCTTGCATTTCTAT...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGAACTCTGCAGAGAACTaGTCTGCTGGGAGTTGTGGC +
Preference number: 5 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGNSAEN*SAGSCG
Trigger: GCCACAACTCCCAGCAGACAAGTTCTCTGCAGAGTT...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTAGATGCTGTAGTGAACTaGCTTCACCCCGAAACCCAC +
Preference number: 5 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVDAVVN*LHPETH
Trigger: GTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp TCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTGGCTTTTATGCAGATaGGCCAAGAACACTATAAAC +
Preference number: 5 (lower is better)
Translates to: SPRNPPIHSRVNRLSPLLWLLCR*AKNTIN
Trigger: GTTTATAGTGTTCTTGGCCAATCTGCATAAAAGCCA...AAGCAGTGGACTTAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp GATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCACCAGACTCTAAACCCTaGACTATGTATATAAGTTGG +
Preference number: 5 (lower is better)
Translates to: DAVVNLLHPETHQSTVGSPDSKP*TMYISW
Trigger: CCAACTTATATACATAGTCAAGGGTTTAGAGTCTGG...TGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589647.5
ENST00000613873.4
CDS TCA 90 bp CACCAGGTAGGACAGAGCTTCTCAAATACAGACTGTGGTCATGAATaGGGTTTTTCATTAGTCCAGGGGGCAAACATCAGGATGAGAATG +
Preference number: 5 (lower is better)
Translates to: HQVGQSFSNTDCGHE*GFSLVQGANIRMRM
Trigger: CATTCTCATCCTGATGTTTGCCCCCTGGACTAATGAAAAACCTCATTCATGACCACAGTCTGTATTTGAGAAGCTCTGTCCTACCTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS TCA 90 bp ACTAACAGACATAAGCAATACAACCCCAGATATCCAGGCCTTTACTaGTACCACTGTCTAGGAGTTAGGTCTAGATGCCTCCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: TNRHKQYNPRYPGLY*YHCLGVRSRCLLHV
Trigger: GACATGGAGGAGGCATCTAGACCTAACTCCTAGACAGTGGTATCAGTAAAGGCCTGGATATCTGGGGTTGTATTGCTTATGTCTGTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS-3UTR CAA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGAACTGGTCTGAGGTaGTTCAAATGCTTCTTTTGG +
Preference number: 5 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVGTGLR*FKCFFW
Trigger: CCAAAAGAAGCATTTGAACAACCTCAGACCAGTTCC...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp AGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGGGTCAACCGATTATATGTAGGCCGTTCTTaGGAATTCTTCTTTAAGCAC +
Preference number: 5 (lower is better)
Translates to: SELASPRNPPIHSRVNRLYVGRS*EFFFKH
Trigger: GTGCTTAAAGAAGAATTCCAAAGAACGGCCTACATA...TAATCGGTTGACCCTACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAGCCACATCTGTTCCTTaGGATTCATGTAGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVATSVP*DSCRVK
Trigger: TTTCACCCTACATGAATCCAAAGGAACAGATGTGGC...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp AGCTCTGGGTATGTAGGCCGTTCTTTGGAATTCTTCTTTAAGCACTGTGAGGTAGGTGATCACCCAGGATaGGGCAGATGTTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: SSGYVGRSLEFFFKHCEVGDHPG*GRCLQK
Trigger: TTTTTGCAAACATCTGCCCAATCCTGGGTGATCACC...TACCTCACAGTGCTTAAAGAAGAATTCCAAAGAACGGCCTACATACCCAGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS-3UTR CAA 90 bp ACAAGTAAGTGCCTAAACTTGCCAATACGCTCCCTGAATTCAGCCTCCAGGCCTCACGAGAAAGAACTTTaGCTGTTTAGTCAACTTGCT +
Preference number: 5 (lower is better)
Translates to: TSKCLNLPIRSLNSASRPHEKEL*LFSQLA
Trigger: AGCAAGTTGACTAAACAGCAAAAGTTCTTTCTCGTG...AGGCCTGGAGGCTGAATTCAGGGAGCGTATTGGCAAGTTTAGGCACTTACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp ACCCAGGATTGGGCAGATGTTTGCAAAAATGGCAGCAGTCACAACAGCTGGAACGTGGTTTGGCTTACTTaGTTGAAATATCTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: TQDWADVCKNGSSHNSWNVVWLT*LKYLAD
Trigger: GTCTGCAAGATATTTCAACAAAGTAAGCCAAACCAC...GTTCCAGCTGTTGTGACTGCTGCCATTTTTGCAAACATCTGCCCAATCCTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTACTCAGGCTTTGGTATTaGTGTTTCTTTACCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVLRLWY*CFFTQR
Trigger: CCTCTGGGTAAAGAAACACAAATACCAAAGCCTGAG...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp TCTATTGATGCTGTAGTGAACTTGCTTCACCCCGAAACCCACCAATCCACAGTAATAGAAATGCAAGCCTaGGAGTCTAAATCTCGAGGT +
Preference number: 5 (lower is better)
Translates to: SIDAVVNLLHPETHQSTVIEMQA*ESKSRG
Trigger: ACCTCGAGATTTAGACTCCAAGGCTTGCATTTCTAT...TACTGTGGATTGGTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATCAATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp ATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTTTAGTCTCCAAGAATCAATCGCACATCTTCACTaGACCGAGAGCATTGATGAG +
Preference number: 5 (lower is better)
Translates to: IHSRVNRLSPLLFSLQESIAHLH*TESIDE
Trigger: CTCATCAATGCTCTCGGTCAAGTGAAGATGTGCGAT...TGATTCTTGGAGACTAAAAAGCAGTGGACTTAATCGGTTGACCCTACTGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS-3UTR CAA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGATCGCACATCTTCACTaGACCGAGAGCATTGATGAG +
Preference number: 5 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGIAHLH*TESIDE
Trigger: CTCATCAATGCTCTCGGTCAAGTGAAGATGTGCGAT...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp ATCCACAGTAGGGTCAACCGATTAAGTCCACTGCTTTTTAGTCTCCAAGAATCAGGGGCCATGTATGGTTaGCAACCTGCATCAATTGTT +
Preference number: 5 (lower is better)
Translates to: IHSRVNRLSPLLFSLQESGAMYG*QPASIV
Trigger: AACAATTGATGCAGGTTGCAAACCATACATGGCCCC...TGATTCTTGGAGACTAAAAAGCAGTGGACTTAATCGGTTGACCCTACTGTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS-3UTR CAA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATAGGGGCCATGTATGGTTaGCAACCTGCATCAATTGTT +
Preference number: 5 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLIGAMYG*QPASIV
Trigger: AACAATTGATGCAGGTTGCAAACCATACATGGCCCC...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp AGCTCTGGGTATGTAGGCCGTTCTTTGGAATTCTTCTTTAAGCACTGTGAGGTAGCCACATCTGTTCCTTaGGATTCATGTAGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: SSGYVGRSLEFFFKHCEVATSVP*DSCRVK
Trigger: TTTCACCCTACATGAATCCAAAGGAACAGATGTGGC...TACCTCACAGTGCTTAAAGAAGAATTCCAAAGAACGGCCTACATACCCAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS-3UTR CAA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATAGGATTGGGCAGATGTTaGCAAAAATGGCAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLIGLGRC*QKWQQS
Trigger: TGACTGCTGCCATTTTTGCAAACATCTGCCCAATCC...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTAGGGGCATTAACTATTTaGAGGGTCATCCGTGAACAC +
Preference number: 5 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVGALTI*RVIREH
Trigger: GTGTTCACGGATGACCCTCAAAATAGTTAATGCCCC...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTAGACTCACAGCCGTGGTaGGCTATAAAATTTCCCATA +
Preference number: 5 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLDSQPW*AIKFPI
Trigger: TATGGGAAATTTTATAGCCAACCACGGCTGTGAGTC...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTGATGCTGTAGTGAACTaGCTTCACCCCGAAACCCAC +
Preference number: 5 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLDAVVN*LHPETH
Trigger: GTGGGTTTCGGGGTGAAGCAAGTTCACTACAGCATC...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAATACCGTAGCACCTTTTaGTCAGGGCCAATGCATTCA +
Preference number: 5 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKYRSTF*SGPMHS
Trigger: TGAATGCATTGGCCCTGACAAAAAGGTGCTACGGTA...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp GAAATCAGATACCCAACCTTGCTGCTCATCTTTAAAGGAAGTTCTTATTATAAGCGGCCTCAACGCAACTaGTGGTCATCTGGTAGTCCA +
Preference number: 5 (lower is better)
Translates to: EIRYPTLLLIFKGSSYYKRPQRN*WSSGSP
Trigger: TGGACTACCAGATGACCACAAGTTGCGTTGAGGCCG...CTTATAATAAGAACTTCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTGCAATCCTCTCCATATaGAACTTGAGGCCAAGAAAG +
Preference number: 5 (lower is better)
Translates to: LYLALISPSIEHTTGQTTAILSI*NLRPRK
Trigger: CTTTCTTGGCCTCAAGTTCAATATGGAGAGGATTGC...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGCCACCTACAACACCTTaGCAAAAGGCAGCAAGGGGT +
Preference number: 5 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRPPTTP*QKAARG
Trigger: ACCCCTTGCTGCCTTTTGCAAAGGTGTTGTAGGTGG...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGAGCCATAGCAAGCACTTaGACGGAAAAAGGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRAIAST*TEKGGW
Trigger: CCAACCACCTTTTTCCGTCAAAGTGCTTGCTATGGC...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATCAAGTGGAGTTTCTCTaGACCGATGCAGCAGATGGA +
Preference number: 5 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDQVEFL*TDAADG
Trigger: TCCATCTGCTGCATCGGTCAAGAGAAACTCCACTTG...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGATAGAAATGCAAGCCTaGGAGTCTAAATCTCGAGGT +
Preference number: 5 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGIEMQA*ESKSRG
Trigger: ACCTCGAGATTTAGACTCCAAGGCTTGCATTTCTAT...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGAGAAGTCTGAGAAGCTaGAGGACTCATATGACACAT +
Preference number: 5 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGRSLRS*RTHMTH
Trigger: ATGTGTCATATGAGTCCTCAAGCTTCTCAGACTTCT...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR CAA 90 bp TCAAGATGGCTACTCTGGTGGGCAATATTCACTCATACGTACAAACATAGGGTATATGACCAGAGCATCTaGTCACTTCCCCTAAAAGAT +
Preference number: 5 (lower is better)
Translates to: SRWLLWWAIFTHTYKHRVYDQSI*SLPLKD
Trigger: ATCTTTTAGGGGAAGTGACAAGATGCTCTGGTCATA...TACCCTATGTTTGTACGTATGAGTGAATATTGCCCACCAGAGTAGCCATCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAAGGCAGGACTTGTGAATaGCCAAATAGACACACAAAC +
Preference number: 5 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKGRTCE*PNRHTN
Trigger: GTTTGTGTGTCTATTTGGCAATTCACAAGTCCTGCC...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGCAGCCAAAACAGCATTaGGGTAGGAAATTAGGAACT +
Preference number: 5 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGQPKQH*GRKLGT
Trigger: AGTTCCTAATTTCCTACCCAAATGCTGTTTTGGCTG...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp CTGTACCTCGCTCTTATCTCCCCAAGTATTGAACATACAACAGGACAAACAACTAAGCATAATGTATGTTaGCCTAATGGTGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: LYLALISPSIEHTTGQTTKHNVC*PNGAAG
Trigger: TCCTGCTGCACCATTAGGCAAACATACATTATGCTT...AGTTGTTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAAGAGCGAGGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACTCCAGAGACACTACTTaGAAGTGCTGGAGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHSRDTT*KCWRWV
Trigger: AACCCACCTCCAGCACTTCAAAGTAGTGTCTCTGGA...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTAATCTCAGCTGTTTCCTaGGTCAAAAACACAGATTCA +
Preference number: 5 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLISAVS*VKNTDS
Trigger: TGAATCTGTGTTTTTGACCAAGGAAACAGCTGAGAT...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS GCA 90 bp AATACCATAATTTCAATCCAACCTTGCTCCAGGGCATGTCATCATTaGACACACGTAAACCCCCGTATACAAGATGTGTCAAACAAGAAA +
Preference number: 5 (lower is better)
Translates to: NTIISIQPCSRACHH*THVNPRIQDVSNKK
Trigger: TTTCTTGTTTGACACATCTTGTATACGGGGGTTTACGTGTGTGCAATGATGACATGCCCTGGAGCAAGGTTGGATTGAAATTATGGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS GCA 90 bp CTTCTTATGTCCTCAGCCATGATAAGGAATACTACTTATATGGTTTaGTATCCAATCTCAAAGGAAAGCCCCTTAGTTCTCTTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LLMSSAMIRNTTYMV*YPISKESPLVLLPE
Trigger: CTCAGGCAAGAGAACTAAGGGGCTTTCCTTTGAGATTGGATAGCAAACCATATAAGTAGTATTCCTTATCATGGCTGAGGACATAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586641.5
ENST00000591445.1
CDS-3UTR CAA 90 bp ATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTAAGAGGGTATGTAGGCCGTTCTTaGGAATTCTTCTTTAAGCAC +
Preference number: 5 (lower is better)
Translates to: IHLDSSFYTIDSKAPLRGYVGRS*EFFFKH
Trigger: GTGCTTAAAGAAGAATTCCAAAGAACGGCCTACATA...CCCTCTTAAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTGGATTGGGCAGATGTTaGCAAAAATGGCAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLGLGRC*QKWQQS
Trigger: TGACTGCTGCCATTTTTGCAAACATCTGCCCAATCC...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR CAA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGGGTGATCACCCAGGATaGGGCAGATGTTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRGDHPG*GRCLQK
Trigger: TTTTTGCAAACATCTGCCCAATCCTGGGTGATCACC...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAATGCTGTTTAGTCAACTaGCTAGGAACTCCCAATGAA +
Preference number: 5 (lower is better)
Translates to: STLTTKAILTTYTWQEGQCCLVN*LGTPNE
Trigger: TTCATTGGGAGTTCCTAGCAAGTTGACTAAACAGCA...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp TGCCAACCGTGGTCTAGGATGTCACAGTCAATATTCTACAGAACAGAGCTACTATGTGGAAATCTTCATTaGAAATTATCTTCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: CQPWSRMSQSIFYRTELLCGNLH*KLSSEP
Trigger: GGGCTCTGAAGATAATTTCAAATGAAGATTTCCACA...TAGTAGCTCTGTTCTGTAGAATATTGACTGTGACATCCTAGACCACGGTTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp TTTTTGCAACTTTGGCCTAGGTTCACAGATGGGAGAGGCATACATATGAGAAGTGTAAATAAAGTTTTATaGGAACACAGCCACCAGGCT +
Preference number: 5 (lower is better)
Translates to: FLQLWPRFTDGRGIHMRSVNKVL*EHSHQA
Trigger: AGCCTGGTGGCTGTGTTCCAATAAAACTTTATTTAC...ACTTCTCATATGTATGCCTCTCCCATCTGTGAACCTAGGCCAAAGTTGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp GAACACTGTCAGAATTCACCAGACTCTTTATGTGTGTGTACAAGGCACCTGATAAATCCTGAGGCCTTATaGAAGTTATCACTTGATGCT +
Preference number: 5 (lower is better)
Translates to: EHCQNSPDSLCVCTRHLINPEAL*KLSLDA
Trigger: AGCATCAAGTGATAACTTCAATAAGGCCTCAGGATT...TATCAGGTGCCTTGTACACACACATAAAGAGTCTGGTGAATTCTGACAGTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAAGCTATTTCCTTGGCTTaGGGATTTGGAGATAACATC +
Preference number: 5 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKAISLA*GFGDNI
Trigger: GATGTTATCTCCAAATCCCAAAGCCAAGGAAATAGC...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS TCA 90 bp ACATGTACGAATAGTAGCTGTGGCCCAGGTAGTATTTCTTCATACTaGGGTCCAAAGACACATAGGGACTTTATTTCTCACATTATCCTT +
Preference number: 5 (lower is better)
Translates to: TCTNSSCGPGSISSY*GPKTHRDFISHIIL
Trigger: AAGGATAATGTGAGAAATAAAGTCCCTATGTGTCTTTGGACCTCAGTATGAAGAAATACTACCTGGGCCACAGCTACTATTCGTACATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS TCA 90 bp TCAAAGGAACAGCCAAGGCAGCTCATGGATGCTTACCTCTGTGAATaGCAGACAGCTTACTATGTAAATGTTCTAATGCTTTTACAATCT +
Preference number: 5 (lower is better)
Translates to: SKEQPRQLMDAYLCE*QTAYYVNVLMLLQS
Trigger: AGATTGTAAAAGCATTAGAACATTTACATAGTAAGCTGTCTGTCATTCACAGAGGTAAGCATCCATGAGCTGCCTTGGCTGTTCCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS-3UTR CAA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTGGAGCACAAAAGACTTaGCCTTGCTTCTCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLGAQKT*PCFSSV
Trigger: TACAGAAGAGAAGCAAGGCAAAGTCTTTTGTGCTCC...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359094.7
ENST00000590474.7
CDS-3UTR CAA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAATATGTAGGCCGTTCTTaGGAATTCTTCTTTAAGCAC +
Preference number: 5 (lower is better)
Translates to: STLTTKAILTTYTWQEGQYVGRS*EFFFKH
Trigger: GTGCTTAAAGAAGAATTCCAAAGAACGGCCTACATA...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTGCCACATCTGTTCCTTaGGATTCATGTAGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLATSVP*DSCRVK
Trigger: TTTCACCCTACATGAATCCAAAGGAACAGATGTGGC...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359094.7
ENST00000589647.5
ENST00000590474.7
ENST00000613873.4
CDS-3UTR CAA 90 bp CCATCAAATTTCCCGTTAATCATTTACTTTTGTTCAGCCATCTGTCTGAAAAGGGACCAGAGAGACAATTaGCTCTACATCGTTCACCAA +
Preference number: 5 (lower is better)
Translates to: PSNFPLIIYFCSAICLKRDQRDN*LYIVHQ
Trigger: TTGGTGAACGATGTAGAGCAAATTGTCTCTCTGGTC...CCTTTTCAGACAGATGGCTGAACAAAAGTAAATGATTAACGGGAAATTTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp ATAATTCATCCATCTAGACAGTTCATTCTATACTATAGATTCCAAGGCCCCCTTGGAACTAGGTATCCATaGTCCTTTCAGGCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: IIHPSRQFILYYRFQGPLGTRYP*SFQAKE
Trigger: TTCTTTGGCCTGAAAGGACAATGGATACCTAGTTCC...AAGGGGGCCTTGGAATCTATAGTATAGAATGAACTGTCTAGATGGATGAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS TCA 90 bp TTTATCAAAGGAACAGCCAAGGCAGCTCATGGATGCTTACCTCTGTaGATGACAGACAGCTTACTATGTAAATGTTCTAATGCTTTTACA +
Preference number: 5 (lower is better)
Translates to: FIKGTAKAAHGCLPL*MTDSLLCKCSNAFT
Trigger: TGTAAAAGCATTAGAACATTTACATAGTAAGCTGTCTGTCATTCACAGAGGTAAGCATCCATGAGCTGCCTTGGCTGTTCCTTTGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586641.5
ENST00000591445.1
CDS-3UTR CAA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACAGAAGTCTGAGAAGCTaGAGGACTCATATGACACAT +
Preference number: 5 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHRSLRS*RTHMTH
Trigger: ATGTGTCATATGAGTCCTCAAGCTTCTCAGACTTCT...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp TTTCTCAAGAATAGGGACCCAGGACAGGTGGCTTCTCCAAATGTTAAAAAGAAACAATTACTTCACTCCTaGATCATCAAGAAACCTAGA +
Preference number: 5 (lower is better)
Translates to: FLKNRDPGQVASPNVKKKQLLHS*IIKKPR
Trigger: TCTAGGTTTCTTGATGATCAAGGAGTGAAGTAATTG...TTTCTTTTTAACATTTGGAGAAGCCACCTGTCCTGGGTCCCTATTCTTGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACAAAGCAGAAGATCCTTaGAGCCAACAAATCCCTCTT +
Preference number: 5 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHKAEDP*SQQIPL
Trigger: AAGAGGGATTTGTTGGCTCAAAGGATCTTCTGCTTT...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACATCAGATACCCAACCTaGCTGCTCATCTTTAAAGGA +
Preference number: 5 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHIRYPT*LLIFKG
Trigger: TCCTTTAAAGATGAGCAGCAAGGTTGGGTATCTGAT...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGACTGTCTGTGTCAACATaGTCCAAAGGATTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRLSVST*SKGFAF
Trigger: AAAAGCAAATCCTTTGGACAATGTTGACACAGACAG...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp AGTACATTAACTACAAAGGCAATCCTTACAACTTACACATGGCAGGAGGGACAACCTTGGCTTTGGGATTaGGAGATAACATCATTAATA +
Preference number: 5 (lower is better)
Translates to: STLTTKAILTTYTWQEGQPWLWD*EITSLI
Trigger: TATTAATGATGTTATCTCCAAATCCCAAAGCCAAGG...TTGTCCCTCCTGCCATGTGTAAGTTGTAAGGATTGCCTTTGTAGTTAATGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp GCAAAATTACCCTCACCTTTGGCAATTATTATACTTCCTTGTCTACTGACTGATGTCAATCATCCAGTCTaGTCCCCCATCAATGTTATT +
Preference number: 5 (lower is better)
Translates to: AKLPSPLAIIILPCLLTDVNHPV*SPINVI
Trigger: AATAACATTGATGGGGGACAAGACTGGATGATTGAC...ATCAGTCAGTAGACAAGGAAGTATAATAATTGCCAAAGGTGAGGGTAATTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp ACCGTAGCACCTTTTTGTCAGGGCCAATGCATTCATTTTGTAAAGAATAAGAGACCTTCCACTAAAGCCTaGATTTCAAACTACTTCATT +
Preference number: 5 (lower is better)
Translates to: TVAPFCQGQCIHFVKNKRPSTKA*ISNYFI
Trigger: AATGAAGTAGTTTGAAATCAAGGCTTTAGTGGAAGG...TCTCTTATTCTTTACAAAATGAATGCATTGGCCCTGACAAAAAGGTGCTACGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACATTGAGGTGGCTAAGTaGAAAAAGGTTAAGAACTCT +
Preference number: 5 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHIEVAK*KKVKNS
Trigger: AGAGTTCTTAACCTTTTTCAACTTAGCCACCTCAAT...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS-3UTR CAA 90 bp GACACTGTGCAAACTGCTATTATTAAGCTGTTGGGACCTAATTACTTAAAACACTTATCTCCCCAAGTATaGAACATACAACAGGACAAA +
Preference number: 5 (lower is better)
Translates to: DTVQTAIIKLLGPNYLKHLSPQV*NIQQDK
Trigger: TTTGTCCTGTTGTATGTTCAATACTTGGGGAGATAA...GTGTTTTAAGTAATTAGGTCCCAACAGCTTAATAATAGCAGTTTGCACAGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590474.7
CDS GCA 72 bp ATCCGCTTCACTGCCATGATCTGCCCGCTGGGCACGTaGCGCATCTTCTCCACCACCCCGTACGCACCTCGT +
Preference number: 6 (lower is better)
Translates to: IRFTAMICPLGT*RIFSTTPYAPR
Trigger: ACGAGGTGCGTACGGGGTGGTGGAGAAGATGCGGCACGTGCCCAGCGGGCAGATCATGGCAGTGAAGCGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586641.5
ENST00000588110.5
ENST00000589295.5
ENST00000589647.5
ENST00000590474.7
ENST00000591445.1
ENST00000613873.4
CDS GCA 72 bp TTTACTGTGGCTCGGATCCGCTTCACTGCCATGATCTaGCCGCTGGGCACGTGCCGCATCTTCTCCACCACC +
Preference number: 6 (lower is better)
Translates to: FTVARIRFTAMI*PLGTCRIFSTT
Trigger: GGTGGTGGAGAAGATGCGGCACGTGCCCAGCGGGCAGATCATGGCAGTGAAGCGGATCCGAGCCACAGTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586641.5
ENST00000588110.5
ENST00000589295.5
ENST00000589647.5
ENST00000590474.7
ENST00000591445.1
ENST00000613873.4
CDS TCA 72 bp AGCAGCACAGTAAGAGACCAGCAGAGGCGACTCTGGTaGGGTTTTCGAGGCTGCAAGGAAGACCAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: SSTVRDQQRRLW*GFRGCKEDQQR
Trigger: CCTCTGCTGGTCTTCCTTGCAGCCTCGAAAACCTCACCAGAGTCGCCTCTGCTGGTCTCTTACTGTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588110.5
ENST00000589295.5
CDS CAA 90 bp CACCCCCTCCTCAAGTTCGGATTGCAGCAAACCTCTGCAAGCTCATaGTTCCGAGGAAATTGCAGCTTCAGGAAGGGAGAAGGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: HPLLKFGLQQTSASS*FRGNCSFRKGEGKW
Trigger: CCACTTCCCTTCTCCCTTCCTGAAGCTGCAATTTCCTCGGAACAATGAGCTTGCAGAGGTTTGCTGCAATCCGAACTTGAGGAGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589295.5
CDS TCA 72 bp CTCCAAAGACCACACTTCGGCAAGGAGAAACAGAACTaGACAGACTCCACCCCCTCCTCAAGTTCGGATTGC +
Preference number: 6 (lower is better)
Translates to: LQRPHFGKEKQN*TDSTPSSSSDC
Trigger: GCAATCCGAACTTGAGGAGGGGGTGGAGTCTGTTCAGTTCTGTTTCTCCTTGCCGAAGTGTGGTCTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589295.5
CDS CCA 72 bp CCATCAGTAGCCGTTTCTGTTCCTGGCTATTTACTGTaGCTCGGATCCGCTCGTCCCAGTTCCATTATAGGC +
Preference number: 6 (lower is better)
Translates to: PSVAVSVPGYLL*LGSARPSSIIG
Trigger: GCCTATAATGGAACTGGGACGAGCGGATCCGAGCCACAGTAAATAGCCAGGAACAGAAACGGCTACTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS CAA 72 bp GAACTGAACAGACTCCACCCCCTCCTCAAGTTCGGATaGCAGCAAACCTCTGCAAGCTCATTGTTCCGAGGA +
Preference number: 6 (lower is better)
Translates to: ELNRLHPLLKFG*QQTSASSLFRG
Trigger: TCCTCGGAACAATGAGCTTGCAGAGGTTTGCTGCAATCCGAACTTGAGGAGGGGGTGGAGTCTGTTCAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589295.5
CDS CAA 90 bp GGAGAAACAGAACTGAACAGACTCCACCCCCTCCTCAAGTTCGGATaGCAGCAAACCTCTGCAAGCTCATTGTTCCGAGGAAATTGCAGC +
Preference number: 6 (lower is better)
Translates to: GETELNRLHPLLKFG*QQTSASSLFRGNCS
Trigger: GCTGCAATTTCCTCGGAACAATGAGCTTGCAGAGGTTTGCTGCAATCCGAACTTGAGGAGGGGGTGGAGTCTGTTCAGTTCTGTTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589295.5
CDS TCA 72 bp TCCATTCAAAGCGCCACTTCCTACCCAGGAAGTCTGTaGGTGTTAAGAACCCAAGCACCAGGTAGGACAGAG +
Preference number: 6 (lower is better)
Translates to: SIQSATSYPGSL*VLRTQAPGRTE
Trigger: CTCTGTCCTACCTGGTGCTTGGGTTCTTAACACTCACAGACTTCCTGGGTAGGAAGTGGCGCTTTGAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS TCA 72 bp TCCAATCTCAAAGGAAAGCCCCTTAGTTCTCTTGCCTaGGTCAATTCTACTTCCACCCATGGGGGACTGGGG +
Preference number: 6 (lower is better)
Translates to: SNLKGKPLSSLA*VNSTSTHGGLG
Trigger: CCCCAGTCCCCCATGGGTGGAAGTAGAATTGACTCAGGCAAGAGAACTAAGGGGCTTTCCTTTGAGATTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586641.5
ENST00000591445.1
CDS TCA 72 bp GCAGGCGTGCAATCTTCATGCAAGTGGAGTTTCTCTTaGCCGATGCAGCAGATGGACTTTCAGGGAATCAAG +
Preference number: 6 (lower is better)
Translates to: AGVQSSCKWSFS*PMQQMDFQGIK
Trigger: CTTGATTCCCTGAAAGTCCATCTGCTGCATCGGTCAAGAGAAACTCCACTTGCATGAAGATTGCACGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586641.5
ENST00000590474.7
CDS CCA 72 bp GAAATATCCAAATCCATCAGTAGCCGTTTCTGTTCCTaGCTATTTACTGTGGCTCGGATCCGCTCGTCCCAG +
Preference number: 6 (lower is better)
Translates to: EISKSISSRFCS*LFTVARIRSSQ
Trigger: CTGGGACGAGCGGATCCGAGCCACAGTAAATAGCCAGGAACAGAAACGGCTACTGATGGATTTGGATATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359094.7
CDS CCA 72 bp GAAATATCCAAATCCATCAGTAGCCGTTTCTGTTCCTaGCTATTTACTGTGGCTCGGATCCGCTTCACTGCC +
Preference number: 6 (lower is better)
Translates to: EISKSISSRFCS*LFTVARIRFTA
Trigger: GGCAGTGAAGCGGATCCGAGCCACAGTAAATAGCCAGGAACAGAAACGGCTACTGATGGATTTGGATATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000586641.5
ENST00000588110.5
ENST00000589295.5
ENST00000589647.5
ENST00000590474.7
ENST00000591445.1
ENST00000613873.4
CDS CAA 72 bp TGCAGGCGTGCAATCTTCATGCAAGTGGAGTTTCTCTaGACCGATGCAGCAGATGGACTTTCAGGGAATCAA +
Preference number: 6 (lower is better)
Translates to: CRRAIFMQVEFL*TDAADGLSGNQ
Trigger: TTGATTCCCTGAAAGTCCATCTGCTGCATCGGTCAAGAGAAACTCCACTTGCATGAAGATTGCACGCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586641.5
ENST00000590474.7
CDS CAA 90 bp GATGCAAGCTGCAGGCGTGCAATCTTCATGCAAGTGGAGTTTCTCTaGACCGATGCAGCAGATGGACTTTCAGGGAATCAAGATGGAAAT +
Preference number: 6 (lower is better)
Translates to: DASCRRAIFMQVEFL*TDAADGLSGNQDGN
Trigger: ATTTCCATCTTGATTCCCTGAAAGTCCATCTGCTGCATCGGTCAAGAGAAACTCCACTTGCATGAAGATTGCACGCCTGCAGCTTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586641.5
ENST00000590474.7
CDS TCA 72 bp GGACAGAGCTTCTCAAATACAGACTGTGGTCATGAATaGGGTTTTTCATTAGTCCAGGGGGCAAACATCAGG +
Preference number: 6 (lower is better)
Translates to: GQSFSNTDCGHE*GFSLVQGANIR
Trigger: CCTGATGTTTGCCCCCTGGACTAATGAAAAACCTCATTCATGACCACAGTCTGTATTTGAGAAGCTCTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS TCA 72 bp CATAAGCAATACAACCCCAGATATCCAGGCCTTTACTaGTACCACTGTCTAGGAGTTAGGTCTAGATGCCTC +
Preference number: 6 (lower is better)
Translates to: HKQYNPRYPGLY*YHCLGVRSRCL
Trigger: GAGGCATCTAGACCTAACTCCTAGACAGTGGTATCAGTAAAGGCCTGGATATCTGGGGTTGTATTGCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS GCA 72 bp ATTTCAATCCAACCTTGCTCCAGGGCATGTCATCATTaGACACACGTAAACCCCCGTATACAAGATGTGTCA +
Preference number: 6 (lower is better)
Translates to: ISIQPCSRACHH*THVNPRIQDVS
Trigger: TGACACATCTTGTATACGGGGGTTTACGTGTGTGCAATGATGACATGCCCTGGAGCAAGGTTGGATTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS CAA 72 bp AATTTCAATCCAACCTTGCTCCAGGGCATGTCATCATaGCACACACGTAAACCCCCGTATACAAGATGTGTC +
Preference number: 6 (lower is better)
Translates to: NFNPTLLQGMSS*HTRKPPYTRCV
Trigger: GACACATCTTGTATACGGGGGTTTACGTGTGTGCAATGATGACATGCCCTGGAGCAAGGTTGGATTGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS TCA 72 bp GGTAGGACAGAGCTTCTCAAATACAGACTGTGGTCATaGATGAGGTTTTTCATTAGTCCAGGGGGCAAACAT +
Preference number: 6 (lower is better)
Translates to: GRTELLKYRLWS*MRFFISPGGKH
Trigger: ATGTTTGCCCCCTGGACTAATGAAAAACCTCATTCATGACCACAGTCTGTATTTGAGAAGCTCTGTCCTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS GCA 72 bp TGCAATCTTCATGCAAGTGGAGTTTCTCTTGACCGATaGAGCAGATGGACTTTCAGGGAATCAAGATGGAAA +
Preference number: 6 (lower is better)
Translates to: CNLHASGVSLDR*SRWTFRESRWK
Trigger: TTTCCATCTTGATTCCCTGAAAGTCCATCTGCTGCATCGGTCAAGAGAAACTCCACTTGCATGAAGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586641.5
ENST00000590474.7
CDS CCA 72 bp GATGAACTTTATCAAAGGAACAGCCAAGGCAGCTCATaGATGCTTACCTCTGTGAATGACAGACAGCTTACT +
Preference number: 6 (lower is better)
Translates to: DELYQRNSQGSS*MLTSVNDRQLT
Trigger: AGTAAGCTGTCTGTCATTCACAGAGGTAAGCATCCATGAGCTGCCTTGGCTGTTCCTTTGATAAAGTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586641.5
ENST00000591445.1
CDS TCA 72 bp TTGGAGTCTAAATCTCGAGGTGGTGTGGAACTGGTCTaGGGTTGTTCAAATGCTTCTTTTGGAATTTTAAGG +
Preference number: 6 (lower is better)
Translates to: LESKSRGGVELV*GCSNASFGILR
Trigger: CCTTAAAATTCCAAAAGAAGCATTTGAACAACCTCAGACCAGTTCCACACCACCTCGAGATTTAGACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359094.7
ENST00000586641.5
ENST00000588110.5
ENST00000589295.5
ENST00000589647.5
ENST00000590474.7
ENST00000591445.1
ENST00000613873.4
CDS TCA 72 bp AATAGTAGCTGTGGCCCAGGTAGTATTTCTTCATACTaGGGTCCAAAGACACATAGGGACTTTATTTCTCAC +
Preference number: 6 (lower is better)
Translates to: NSSCGPGSISSY*GPKTHRDFISH
Trigger: GTGAGAAATAAAGTCCCTATGTGTCTTTGGACCTCAGTATGAAGAAATACTACCTGGGCCACAGCTACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS CAA 90 bp AAATACCATAATTTCAATCCAACCTTGCTCCAGGGCATGTCATCATaGCACACACGTAAACCCCCGTATACAAGATGTGTCAAACAAGAA +
Preference number: 6 (lower is better)
Translates to: KYHNFNPTLLQGMSS*HTRKPPYTRCVKQE
Trigger: TTCTTGTTTGACACATCTTGTATACGGGGGTTTACGTGTGTGCAATGATGACATGCCCTGGAGCAAGGTTGGATTGAAATTATGGTATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591445.1
CDS CAA 72 bp GTCCTCAGCCATGATAAGGAATACTACTTATATGGTTaGCTATCCAATCTCAAAGGAAAGCCCCTTAGTTCT +
Preference number: 6 (lower is better)
Translates to: VLSHDKEYYLYG*LSNLKGKPLSS
Trigger: AGAACTAAGGGGCTTTCCTTTGAGATTGGATAGCAAACCATATAAGTAGTATTCCTTATCATGGCTGAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586641.5
ENST00000591445.1
CDS TCA 72 bp ACAAGAAAGAGCTCCATGATTGTGAAGGCATTTACGTaGTCAAAGAAACTTCTTTTTAAGTTATTGTTCCTC +
Preference number: 6 (lower is better)
Translates to: TRKSSMIVKAFT*SKKLLFKLLFL
Trigger: GAGGAACAATAACTTAAAAAGAAGTTTCTTTGATCACGTAAATGCCTTCACAATCATGGAGCTCTTTCTTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591445.1