Pregenerated sensors for MAP2K5-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000270964Ensembl transcript IDs: ENST00000604760.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CGTGACCGGGTCGCCGCGGGCGCTCTGTGGGCGATGAGGGTCTCCTaGGCGAGCAAGACCAGTCTCTCCCCGACTCGCCACGCGCCACGC | + |
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Preference number: 5 (lower is better) Translates to: RDRVAAGALWAMRVS*ASKTSLSPTRHAPR Trigger: GCGTGGCGCGTGGCGAGTCGGGGAGAGACTGGTCTTGCTCGCTCAGGAGACCCTCATCGCCCACAGAGCGCCCGCGGCGACCCGGTCACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS TCA 90 bp | AATGGAAGGGCCGTGACCGGGTCGCCGCGGGCGCTCTGTGGGCGATaGGGGTCTCCTGAGCGAGCAAGACCAGTCTCTCCCCGACTCGCC | + |
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Preference number: 5 (lower is better) Translates to: NGRAVTGSPRALCGR*GSPERARPVSPRLA Trigger: GGCGAGTCGGGGAGAGACTGGTCTTGCTCGCTCAGGAGACCCTCATCGCCCACAGAGCGCCCGCGGCGACCCGGTCACGGCCCTTCCATT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS TCA 90 bp | TTTCACCTCGCTGTCATTAAGCAGGGTCAGGAAATGGAAGGGCCGTaGCCGGGTCGCCGCGGGCGCTCTGTGGGCGATGAGGGTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FHLAVIKQGQEMEGP*PGRRGRSVGDEGLL Trigger: CAGGAGACCCTCATCGCCCACAGAGCGCCCGCGGCGACCCGGTCACGGCCCTTCCATTTCCTGACCCTGCTTAATGACAGCGAGGTGAAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS CCA 90 bp | TTGGTAGATGTTTTCACCTCGCTGTCATTAAGCAGGGTCAGGAAATaGAAGGGCCGTGACCGGGTCGCCGCGGGCGCTCTGTGGGCGATG | + |
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Preference number: 5 (lower is better) Translates to: LVDVFTSLSLSRVRK*KGRDRVAAGALWAM Trigger: CATCGCCCACAGAGCGCCCGCGGCGACCCGGTCACGGCCCTTCCATTTCCTGACCCTGCTTAATGACAGCGAGGTGAAAACATCTACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS TCA 90 bp | TCTGTAGAGGCACCATCGTTCTACAACCTTATGCACTTTAAAATCTaGGGTAACAAGGCATTTGAAGATAACCAAGGTTGGCCGGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: SVEAPSFYNLMHFKI*GNKAFEDNQGWPGA Trigger: CGCGCCCGGCCAACCTTGGTTATCTTCAAATGCCTTGTTACCTCAGATTTTAAAGTGCATAAGGTTGTAGAACGATGGTGCCTCTACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS TCA 90 bp | CATGGACTAGACCGAATATTTCTGCAACAGTTTAATAAGAGACGATaGTGCGACTACTGCAGCTGTCCCCAGGCAATTAAACTCTTCGGC | + |
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Preference number: 5 (lower is better) Translates to: HGLDRIFLQQFNKRR*CDYCSCPQAIKLFG Trigger: GCCGAAGAGTTTAATTGCCTGGGGACAGCTGCAGTAGTCGCATCATCGTCTCTTATTAAACTGTTGCAGAAATATTCGGTCTAGTCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS GCA 90 bp | ATTGCTACTTCCGTGATATCACCATATCACCAACTGCGTAAGCAGTaGTATTTAGTTGAAAATACATGGACTAGACCGAATATTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: IATSVISPYHQLRKQ*YLVENTWTRPNISA Trigger: TGCAGAAATATTCGGTCTAGTCCATGTATTTTCAACTAAATAGCACTGCTTACGCAGTTGGTGATATGGTGATATCACGGAAGTAGCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS TCA 72 bp | GGAGAATCGCTTGAATCCGGGAGGCTGAGGTTGTGGTaGGTAGAGGTCGCGCCGTTGCACTCCAGCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GESLESGRLRLW*VEVAPLHSSLG Trigger: GCCCAGGCTGGAGTGCAACGGCGCGACCTCTACTCACCACAACCTCAGCCTCCCGGATTCAAGCGATTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS CCA 72 bp | GTCTCTACTGAAAATACAAAAATGAGCGGGCACGGATaGCGCACGCCTGTAGTCCCAGTTACTCGGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: VSTENTKMSGHG*RTPVVPVTRQG Trigger: CCCCTGCCGAGTAACTGGGACTACAGGCGTGCGCCATCCGTGCCCGCTCATTTTTGTATTTTCAGTAGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS CCA 72 bp | ATTCGATGCACACAACCCCACGAACATTCAGATTCATaGCTTGACAAAGTGGGGATAACCGGGAGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: IRCTQPHEHSDS*LDKVGITGSCS Trigger: GCTGCAGCTCCCGGTTATCCCCACTTTGTCAAGCCATGAATCTGAATGTTCGTGGGGTTGTGTGCATCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS CAA 72 bp | TGTAAAGACAAACGGTCTGCAATGTTAAGCCTTAAATaGGCTTTTGGCGGACTCCAGCCTTTTACCCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: CKDKRSAMLSLK*AFGGLQPFTLR Trigger: ACGAAGGGTAAAAGGCTGGAGTCCGCCAAAAGCCAATTTAAGGCTTAACATTGCAGACCGTTTGTCTTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS TCA 72 bp | GACCGAATATTTCTGCAACAGTTTAATAAGAGACGATaGTGCGACTACTGCAGCTGTCCCCAGGCAATTAAA | + |
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Preference number: 6 (lower is better) Translates to: DRIFLQQFNKRR*CDYCSCPQAIK Trigger: TTTAATTGCCTGGGGACAGCTGCAGTAGTCGCATCATCGTCTCTTATTAAACTGTTGCAGAAATATTCGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS TCA 72 bp | GCACCATCGTTCTACAACCTTATGCACTTTAAAATCTaGGGTAACAAGGCATTTGAAGATAACCAAGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: APSFYNLMHFKI*GNKAFEDNQGW Trigger: CCAACCTTGGTTATCTTCAAATGCCTTGTTACCTCAGATTTTAAAGTGCATAAGGTTGTAGAACGATGGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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| CDS GCA 72 bp | TCCGTGATATCACCATATCACCAACTGCGTAAGCAGTaGTATTTAGTTGAAAATACATGGACTAGACCGAAT | + |
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Preference number: 6 (lower is better) Translates to: SVISPYHQLRKQ*YLVENTWTRPN Trigger: ATTCGGTCTAGTCCATGTATTTTCAACTAAATAGCACTGCTTACGCAGTTGGTGATATGGTGATATCACGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604760.1 |
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