RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000078018

Ensembl transcript IDs: ENST00000199940.10, ENST00000360351.8, ENST00000361559.8, ENST00000392193.5, ENST00000392194.5, ENST00000445941.5, ENST00000447185.5, ENST00000452717.1, ENST00000461253.1, ENST00000464007.1, ENST00000471619.5, ENST00000473543.1, ENST00000475600.5, ENST00000478233.1, ENST00000481649.1, ENST00000482864.5, ENST00000673860.1, ENST00000682079.1

Found 910 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTGGTGTGGGTTTGCTCCTAGGGTTTCTTGTATGGCAGTTACACTaGTTGCCATATCCACTGGGTCACCAAAAAGCACCTGTGTCTCTG +
Preference number: 1 (lower is better)
Translates to: SGVGLLLGFLVWQLH*LPYPLGHQKAPVSL
Trigger: CAGAGACACAGGTGCTTTTTGGTGACCCAGTGGATATGGCAACCAGTGTAACTGCCATACAAGAAACCCTAGGAGCAAACCCACACCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CCA 90 bp CACAGGTGTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTaGAACTCAGCAGGTAAATCCAGAGAGAGTTGGTTCCTAAATGAA +
Preference number: 1 (lower is better)
Translates to: HRCHTCRWDVSPSRC*NSAGKSRESWFLNE
Trigger: TTCATTTAGGAACCAACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGACACCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CCA 90 bp CATTTAATGGCATTCTCTCTTCAGCCTTCTCCAGCCGTACCTAGCTaGTGTTACACAGGTGTCATACTTGTAGGTGGGATGTCAGCCCAT +
Preference number: 1 (lower is better)
Translates to: HLMAFSLQPSPAVPS*CYTGVILVGGMSAH
Trigger: ATGGGCTGACATCCCACCTACAAGTATGACACCTGTGTAACACCAGCTAGGTACGGCTGGAGAAGGCTGAAGAGAGAATGCCATTAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR GCA 90 bp TTACACAGGTGTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTaGTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGGTTCCTAAAT +
Preference number: 1 (lower is better)
Translates to: LHRCHTCRWDVSPSR*WNSAGKSRESWFLN
Trigger: ATTTAGGAACCAACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGACACCTGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CCA 90 bp CATGAACTCGGGTCTTTCCTGCATCATTATGAGGTATCCAATTTCTaGTTGCAAGTGACCCAGAGGTTGAGTTCACTGGAGAAGTTGGCC +
Preference number: 1 (lower is better)
Translates to: HELGSFLHHYEVSNF*LQVTQRLSSLEKLA
Trigger: GGCCAACTTCTCCAGTGAACTCAACCTCTGGGTCACTTGCAACCAGAAATTGGATACCTCATAATGATGCAGGAAAGACCCGAGTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CCA 90 bp TCCATAATCTTAAACCAACAATCTGTAAACCCTTTCATGTATAACTaGACCCACCCCCACAAACTCCATGTTGGTGAAAGCAAAGAAAAA +
Preference number: 1 (lower is better)
Translates to: SIILNQQSVNPFMYN*THPHKLHVGESKEK
Trigger: TTTTTCTTTGCTTTCACCAACATGGAGTTTGTGGGGGTGGGTCCAGTTATACATGAAAGGGTTTACAGATTGTTGGTTTAAGATTATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR TCA 90 bp ATGCTCTTCCCTTCCTGCAATCAGACTCCTTGGTTTAATTTAACCTaGAATAAGTTACAATGGGCAGTTTTTATCTTCTCACTCAGAAAC +
Preference number: 1 (lower is better)
Translates to: MLFPSCNQTPWFNLT*NKLQWAVFIFSLRN
Trigger: GTTTCTGAGTGAGAAGATAAAAACTGCCCATTGTAACTTATTTCAGGTTAAATTAAACCAAGGAGTCTGATTGCAGGAAGGGAAGAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACTCAGAGCCCACTCCTaGCAAGAGCTCATGCCTAAA +
Preference number: 2 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLRAHS*QELMPK
Trigger: TTTAGGCATGAGCTCTTGGCAGGAGTGGGCTCTGAG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCTCAGAGCCCACTCCTaGCAAGAGCTCATGCCTAAA +
Preference number: 2 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLRAHS*QELMPK
Trigger: TTTAGGCATGAGCTCTTGGCAGGAGTGGGCTCTGAG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CAA 90 bp GGTGTGGGTTTGCTCCTAGGGTTTCTTGTATGGCAGTTACACTGGTaGCCATATCCACTGGGTCACCAAAAAGCACCTGTGTCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: GVGLLLGFLVWQLHW*PYPLGHQKAPVSLP
Trigger: AGGCAGAGACACAGGTGCTTTTTGGTGACCCAGTGGATATGGCAACCAGTGTAACTGCCATACAAGAAACCCTAGGAGCAAACCCACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTAGCTGAGAATGAGTaGTGTGGGTTTGCTCCTAGG +
Preference number: 2 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLAENE*CGFAPR
Trigger: CCTAGGAGCAAACCCACACCACTCATTCTCAGCTAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTACAGGGTTACGGCTTTaGGTTGTTACAGAAAGCAAC +
Preference number: 2 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVTGLRL*VVTESN
Trigger: GTTGCTTTCTGTAACAACTCAAAGCCGTAACCCTGT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAATGCTCTTCCCTTCCTaGAATCAGACTCCTTGGTTT +
Preference number: 2 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVMLFPS*NQTPWF
Trigger: AAACCAAGGAGTCTGATTGCAGGAAGGGAAGAGCAT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACTAGGGTTTCTTGTATaGCAGTTACACTGGTTGCCA +
Preference number: 2 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLGFLV*QLHWLP
Trigger: TGGCAACCAGTGTAACTGCCATACAAGAAACCCTAG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGGACTGACATACTCTaGTATAATTATCCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVWTDIL*YNYPGP
Trigger: GGGACCTGGATAATTATATCAGAGTATGTCAGTCCA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGTGTCCCCACAAGAGTaGTGCTCAAAAAGCTTAATT +
Preference number: 2 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVVSPQE*CSKSLI
Trigger: AATTAAGCTTTTTGAGCACCACTCTTGTGGGGACAC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGGACACAAATCTAGCTaGTCAACTGACATTCTAATC +
Preference number: 2 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVGHKSS*STDILI
Trigger: GATTAGAATGTCAGTTGATCAGCTAGATTTGTGTCC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGGACACAAATCTAGCTaGTCAACTGACATTCTAATC +
Preference number: 2 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVGHKSS*STDILI
Trigger: GATTAGAATGTCAGTTGATCAGCTAGATTTGTGTCC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGTGAGAGGAACTAATTaGTTTGTGAGTTCTAGACTG +
Preference number: 2 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVVRGTN*FVSSRL
Trigger: CAGTCTAGAACTCACAAATCAATTAGTTCCTCTCAC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTATTCAGGAACTGATTTaGCTCAAAGAGATCATACGC +
Preference number: 2 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVIQELI*LKEIIR
Trigger: GCGTATGATCTCTTTGAGCCAAATCAGTTCCTGAAT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CAA 90 bp GAACTCGGGTCTTTCCTGCATCATTATGAGGTATCCAATTTCTGGTaGCAAGTGACCCAGAGGTTGAGTTCACTGGAGAAGTTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: ELGSFLHHYEVSNFW*QVTQRLSSLEKLAF
Trigger: AAAGGCCAACTTCTCCAGTGAACTCAACCTCTGGGTCACTTGCAACCAGAAATTGGATACCTCATAATGATGCAGGAAAGACCCGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTTCCTGCATCATTATaGGGTATCCAATTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVFPASL*GIQFLV
Trigger: AACCAGAAATTGGATACCTCATAATGATGCAGGAAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATGCAACACCAAAGGGTaGAGGAGACACAGATACTGT +
Preference number: 2 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVCNTKG*RRHRYC
Trigger: ACAGTATCTGTGTCTCCTGCACCCTTTGGTGTTGCA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTGTTACTTTACAGAGTaGAATGTTGGAGTCTTGGAA +
Preference number: 2 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVCYFTE*NVGVLE
Trigger: TTCCAAGACTCCAACATTGCACTCTGTAAAGTAACA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGTTACTTTACAGAGTaGAATGTTGGAGTCTTGGAA +
Preference number: 2 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVCYFTE*NVGVLE
Trigger: TTCCAAGACTCCAACATTGCACTCTGTAAAGTAACA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATCTTCCTGTTGCAAATaGAAATCAGGTCAATTTCTG +
Preference number: 2 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVSSCCK*KSGQFL
Trigger: CAGAAATTGACCTGATTTCCATTTGCAACAGGAAGA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAATAAATTGCCCAGATTaGTCAAATCAAACCTCACAG +
Preference number: 2 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVINCPD*SNQTSQ
Trigger: CTGTGAGGTTTGATTTGACCAATCTGGGCAATTTAT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTATAAATTGCCCAGATTaGTCAAATCAAACCTCACAG +
Preference number: 2 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVINCPD*SNQTSQ
Trigger: CTGTGAGGTTTGATTTGACCAATCTGGGCAATTTAT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGTTTCTCTCTTTTACTaGTACAAACGATCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVVSLFY*YKRSVP
Trigger: AGGAACTGATCGTTTGTACCAGTAAAAGAGAGAAAC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAAGCCAGAGAGAAACTaGCATAGTAGATCTAGAATT +
Preference number: 2 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVKPERN*HSRSRI
Trigger: AATTCTAGATCTACTATGCCAGTTTCTCTCTGGCTT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCTCAGAGCCCACTCCTaGCAAGAGCTCATGCCTAAA +
Preference number: 2 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFLRAHS*QELMPK
Trigger: TTTAGGCATGAGCTCTTGGCAGGAGTGGGCTCTGAG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAATGAATATAACAACTaGTCAGAGCCCACTCCTGCC +
Preference number: 2 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVNEYNN*SEPTPA
Trigger: GGCAGGAGTGGGCTCTGAGCAGTTGTTATATTCATT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAATGCTCTTCCCTTCCTaGAATCAGACTCCTTGGTTT +
Preference number: 2 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVMLFPS*NQTPWF
Trigger: AAACCAAGGAGTCTGATTGCAGGAAGGGAAGAGCAT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAAGCACCTGTGTCTCTaGCTTTGCATCCCTTGGCTT +
Preference number: 2 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVKHLCL*LCIPWL
Trigger: AAGCCAAGGGATGCAAAGGCAGAGACACAGGTGCTT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGGTTGCCATATCCACTaGGTCACCAAAAAGCACCTG +
Preference number: 2 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVGCHIH*VTKKHL
Trigger: CAGGTGCTTTTTGGTGACCCAGTGGATATGGCAACC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATGGACTGACATACTCTaGTATAATTATCCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVWTDIL*YNYPGP
Trigger: GGGACCTGGATAATTATATCAGAGTATGTCAGTCCA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATGCAACACCAAAGGGTaGAGGAGACACAGATACTGT +
Preference number: 2 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVCNTKG*RRHRYC
Trigger: ACAGTATCTGTGTCTCCTGCACCCTTTGGTGTTGCA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGTCAGCCCATCACGCTaGTGGAACTCAGCAGGTAAA +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSVSPSR*WNSAGK
Trigger: TTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGAC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACCTTTCATGTATAACTaGACCCACCCCCACAAACTC +
Preference number: 2 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVPFMYN*THPHKL
Trigger: GAGTTTGTGGGGGTGGGTCCAGTTATACATGAAAGG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTAGCTGAGAATGAGTaGTGTGGGTTTGCTCCTAGG +
Preference number: 2 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLAENE*CGFAPR
Trigger: CCTAGGAGCAAACCCACACCACTCATTCTCAGCTAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGTGAGAGGAACTAATTaGTTTGTGAGTTCTAGACTG +
Preference number: 2 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVVRGTN*FVSSRL
Trigger: CAGTCTAGAACTCACAAATCAATTAGTTCCTCTCAC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAATGAATATAACAACTaGTCAGAGCCCACTCCTGCC +
Preference number: 2 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVNEYNN*SEPTPA
Trigger: GGCAGGAGTGGGCTCTGAGCAGTTGTTATATTCATT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAATTCAGGAACTGATTTaGCTCAAAGAGATCATACGC +
Preference number: 2 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVIQELI*LKEIIR
Trigger: GCGTATGATCTCTTTGAGCCAAATCAGTTCCTGAAT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGGTTGCCATATCCACTaGGTCACCAAAAAGCACCTG +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSGCHIH*VTKKHL
Trigger: CAGGTGCTTTTTGGTGACCCAGTGGATATGGCAACC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACTAGGGTTTCTTGTATaGCAGTTACACTGGTTGCCA +
Preference number: 2 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLGFLV*QLHWLP
Trigger: TGGCAACCAGTGTAACTGCCATACAAGAAACCCTAG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CAA 90 bp AATTTCTGGTTGCAAGTGACCCAGAGGTTGAGTTCACTGGAGAAGTaGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTCTT +
Preference number: 2 (lower is better)
Translates to: NFWLQVTQRLSSLEK*AFKLFTALDYLRIL
Trigger: AAGAATACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAACTCAACCTCTGGGTCACTTGCAACCAGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTGCAACACCAAAGGGTaGAGGAGACACAGATACTGT +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSCNTKG*RRHRYC
Trigger: ACAGTATCTGTGTCTCCTGCACCCTTTGGTGTTGCA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATCTTCCTGTTGCAAATaGAAATCAGGTCAATTTCTG +
Preference number: 2 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVSSCCK*KSGQFL
Trigger: CAGAAATTGACCTGATTTCCATTTGCAACAGGAAGA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCCTTTCATGTATAACTaGACCCACCCCCACAAACTC +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSPFMYN*THPHKL
Trigger: GAGTTTGTGGGGGTGGGTCCAGTTATACATGAAAGG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAGGGGATCTTTACTTTaGGTAAGAAAGACAAACATC +
Preference number: 2 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVRGSLL*VRKTNI
Trigger: GATGTTTGTCTTTCTTACCCAAAGTAAAGATCCCCT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACCTTGGCTTTTGTCTTaGATGTTTCTATACTTCCCC +
Preference number: 2 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVPWLLS*MFLYFP
Trigger: GGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGTATGGCAGTTACACTaGTTGCCATATCCACTGGGT +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSVWQLH*LPYPLG
Trigger: ACCCAGTGGATATGGCAACCAGTGTAACTGCCATAC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGAGGTATCCAATTTCTaGTTGCAAGTGACCCAGAGG +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSEVSNF*LQVTQR
Trigger: CCTCTGGGTCACTTGCAACCAGAAATTGGATACCTC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGAGTTGGTTCCTAAATaGACGTGGCCTTTGAAACTC +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSELVPK*TWPLKL
Trigger: GAGTTTCAAAGGCCACGTTCATTTAGGAACCAACTC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTATGCTCTTCCCTTCCTaGAATCAGACTCCTTGGTTT +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSMLFPS*NQTPWF
Trigger: AAACCAAGGAGTCTGATTGCAGGAAGGGAAGAGCAT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTGGACTGACATACTCTaGTATAATTATCCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSWTDIL*YNYPGP
Trigger: GGGACCTGGATAATTATATCAGAGTATGTCAGTCCA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAGGGGATCTTTACTTTaGGTAAGAAAGACAAACATC +
Preference number: 2 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVRGSLL*VRKTNI
Trigger: GATGTTTGTCTTTCTTACCCAAAGTAAAGATCCCCT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGTGTCCCCACAAGAGTaGTGCTCAAAAAGCTTAATT +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSVSPQE*CSKSLI
Trigger: AATTAAGCTTTTTGAGCACCACTCTTGTGGGGACAC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAAGCCAGAGAGAAACTaGCATAGTAGATCTAGAATT +
Preference number: 2 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVKPERN*HSRSRI
Trigger: AATTCTAGATCTACTATGCCAGTTTCTCTCTGGCTT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGTTCACTGGAGAAGTTaGCCTTTAAACTCTTCACAG +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSVHWRS*PLNSSQ
Trigger: CTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CAA 90 bp TTTCTTCTATTTTCTGGTGCACTTCAAGGGAAGCTGATGAATAAATaGCCCAGATTGGTCAAATCAAACCTCACAGCAATTAATAGGCAG +
Preference number: 2 (lower is better)
Translates to: FLLFSGALQGKLMNK*PRLVKSNLTAINRQ
Trigger: CTGCCTATTAATTGCTGTGAGGTTTGATTTGACCAATCTGGGCAATTTATTCATCAGCTTCCCTTGAAGTGCACCAGAAAATAGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTATTCAGGAACTGATTTaGCTCAAAGAGATCATACGC +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSIQELI*LKEIIR
Trigger: GCGTATGATCTCTTTGAGCCAAATCAGTTCCTGAAT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTTCCTGCATCATTATaGGGTATCCAATTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFPASL*GIQFLV
Trigger: AACCAGAAATTGGATACCTCATAATGATGCAGGAAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTCTTCCTGTTGCAAATaGAAATCAGGTCAATTTCTG +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSSSCCK*KSGQFL
Trigger: CAGAAATTGACCTGATTTCCATTTGCAACAGGAAGA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTATAAATTGCCCAGATTaGTCAAATCAAACCTCACAG +
Preference number: 2 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSINCPD*SNQTSQ
Trigger: CTGTGAGGTTTGATTTGACCAATCTGGGCAATTTAT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCCTGTGTCTCTGCCTTaGCATCCCTTGGCTTTTGTC +
Preference number: 3 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVPVSLP*HPLAFV
Trigger: GACAAAAGCCAAGGGATGCAAAGGCAGAGACACAGG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGGCAGTTACACTGGTaGCCATATCCACTGGGTCAC +
Preference number: 3 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVWQLHW*PYPLGH
Trigger: GTGACCCAGTGGATATGGCAACCAGTGTAACTGCCA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCATCACGGGAGAGACTaGTATCTGGCACTAAAACAG +
Preference number: 3 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVHHGRD*YLALKQ
Trigger: CTGTTTTAGTGCCAGATACAAGTCTCTCCCGTGATG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTCTATACTTCCCCGTaGCCTCAGTACATCCTCATC +
Preference number: 3 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVFYTSP*PQYILI
Trigger: GATGAGGATGTACTGAGGCAACGGGGAAGTATAGAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCTGCCTTTGCATCCCTaGGCTTTTGTCTTGGATGTT +
Preference number: 3 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLPLHP*AFVLDV
Trigger: AACATCCAAGACAAAAGCCAAGGGATGCAAAGGCAG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTATGAGTGGTGTGGGTTaGCTCCTAGGGTTTCTTGTA +
Preference number: 3 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVMSGVG*LLGFLV
Trigger: TACAAGAAACCCTAGGAGCAAACCCACACCACTCAT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGTATCCAATTTCTGGTaGCAAGTGACCCAGAGGTTG +
Preference number: 3 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVVSNFW*QVTQRL
Trigger: CAACCTCTGGGTCACTTGCAACCAGAAATTGGATAC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR GCA 72 bp TGTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTaGTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGG +
Preference number: 3 (lower is better)
Translates to: CHTCRWDVSPSR*WNSAGKSRESW
Trigger: CCAACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CCA 72 bp GCATTCTCTCTTCAGCCTTCTCCAGCCGTACCTAGCTaGTGTTACACAGGTGTCATACTTGTAGGTGGGATG +
Preference number: 3 (lower is better)
Translates to: AFSLQPSPAVPS*CYTGVILVGGM
Trigger: CATCCCACCTACAAGTATGACACCTGTGTAACACCAGCTAGGTACGGCTGGAGAAGGCTGAAGAGAGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCCCTTGGCTTTTGTCTaGGATGTTTCTATACTTCCC +
Preference number: 3 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVPLAFV*DVSILP
Trigger: GGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTAGTGAAATGAGCAGCTaGGATTTTAACAAGGCCTTC +
Preference number: 3 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSEMSS*DFNKAF
Trigger: GAAGGCCTTGTTAAAATCCAAGCTGCTCATTTCACT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGGTTACGGCTTTGAGTaGTTACAGAAAGCAACTTCA +
Preference number: 3 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVGYGFE*LQKATS
Trigger: TGAAGTTGCTTTCTGTAACAACTCAAAGCCGTAACC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACGCCTAGTGGACCATTaGATTTTAATGGTTCAGATC +
Preference number: 3 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVRLVDH*ILMVQI
Trigger: GATCTGAACCATTAAAATCAAATGGTCCACTAGGCG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CCA 72 bp TTCTTGTATGGCAGTTACACTGGTTGCCATATCCACTaGGTCACCAAAAAGCACCTGTGTCTCTGCCTTTGC +
Preference number: 3 (lower is better)
Translates to: FLYGSYTGCHIH*VTKKHLCLCLC
Trigger: GCAAAGGCAGAGACACAGGTGCTTTTTGGTGACCCAGTGGATATGGCAACCAGTGTAACTGCCATACAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CCA 72 bp GGTTTGCTCCTAGGGTTTCTTGTATGGCAGTTACACTaGTTGCCATATCCACTGGGTCACCAAAAAGCACCT +
Preference number: 3 (lower is better)
Translates to: GLLLGFLVWQLH*LPYPLGHQKAP
Trigger: AGGTGCTTTTTGGTGACCCAGTGGATATGGCAACCAGTGTAACTGCCATACAAGAAACCCTAGGAGCAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTATTCAGGAACTGATTaGGCTCAAAGAGATCATACG +
Preference number: 3 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVYSGTD*AQRDHT
Trigger: CGTATGATCTCTTTGAGCCAAATCAGTTCCTGAATA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGCCAGTGTCTTCCTGTaGCAAATGGAAATCAGGTCA +
Preference number: 3 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVASVFL*QMEIRS
Trigger: TGACCTGATTTCCATTTGCAACAGGAAGACACTGGC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACATCACGGGAGAGACTaGTATCTGGCACTAAAACAG +
Preference number: 3 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVHHGRD*YLALKQ
Trigger: CTGTTTTAGTGCCAGATACAAGTCTCTCCCGTGATG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATGGCAGTTACACTGGTaGCCATATCCACTGGGTCAC +
Preference number: 3 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVWQLHW*PYPLGH
Trigger: GTGACCCAGTGGATATGGCAACCAGTGTAACTGCCA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGCCAAATCTAGTAGTTaGGTGCCTTGTATAATCTTT +
Preference number: 3 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVAKSSS*VPCIIF
Trigger: AAAGATTATACAAGGCACCAAACTACTAGATTTGGC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR GCA 72 bp CACTGGGTCACCAAAAAGCACCTGTGTCTCTGCCTTTaGATCCCTTGGCTTTTGTCTTGGATGTTTCTATAC +
Preference number: 3 (lower is better)
Translates to: HWVTKKHLCLCL*IPWLLSWMFLY
Trigger: GTATAGAAACATCCAAGACAAAAGCCAAGGGATGCAAAGGCAGAGACACAGGTGCTTTTTGGTGACCCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR GCA 72 bp CATATCCACTGGGTCACCAAAAAGCACCTGTGTCTCTaGCTTTGCATCCCTTGGCTTTTGTCTTGGATGTTT +
Preference number: 3 (lower is better)
Translates to: HIHWVTKKHLCL*LCIPWLLSWMF
Trigger: AAACATCCAAGACAAAAGCCAAGGGATGCAAAGGCAGAGACACAGGTGCTTTTTGGTGACCCAGTGGATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CCA 72 bp GGGTCTTTCCTGCATCATTATGAGGTATCCAATTTCTaGTTGCAAGTGACCCAGAGGTTGAGTTCACTGGAG +
Preference number: 3 (lower is better)
Translates to: GSFLHHYEVSNF*LQVTQRLSSLE
Trigger: CTCCAGTGAACTCAACCTCTGGGTCACTTGCAACCAGAAATTGGATACCTCATAATGATGCAGGAAAGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGCCAGTGTCTTCCTGTaGCAAATGGAAATCAGGTCA +
Preference number: 3 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVASVFL*QMEIRS
Trigger: TGACCTGATTTCCATTTGCAACAGGAAGACACTGGC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAGTGAAATGAGCAGCTaGGATTTTAACAAGGCCTTC +
Preference number: 3 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVSEMSS*DFNKAF
Trigger: GAAGGCCTTGTTAAAATCCAAGCTGCTCATTTCACT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACGCCTAGTGGACCATTaGATTTTAATGGTTCAGATC +
Preference number: 3 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVRLVDH*ILMVQI
Trigger: GATCTGAACCATTAAAATCAAATGGTCCACTAGGCG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTCTATACTTCCCCGTaGCCTCAGTACATCCTCATC +
Preference number: 3 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVFYTSP*PQYILI
Trigger: GATGAGGATGTACTGAGGCAACGGGGAAGTATAGAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCCTGTGTCTCTGCCTTaGCATCCCTTGGCTTTTGTC +
Preference number: 3 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSPVSLP*HPLAFV
Trigger: GACAAAAGCCAAGGGATGCAAAGGCAGAGACACAGG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTGGCAGTTACACTGGTaGCCATATCCACTGGGTCAC +
Preference number: 3 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSWQLHW*PYPLGH
Trigger: GTGACCCAGTGGATATGGCAACCAGTGTAACTGCCA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CCA 72 bp TGTAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGAGAAGGTCACTACAATCAGTACATTCTTCCATT +
Preference number: 3 (lower is better)
Translates to: CRCVCVCVCVCV*RRSLQSVHSSI
Trigger: AATGGAAGAATGTACTGATTGTAGTGACCTTCTCCACACACACACACACACACACACACACACACACCTACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CCA 72 bp TTAAACCAACAATCTGTAAACCCTTTCATGTATAACTaGACCCACCCCCACAAACTCCATGTTGGTGAAAGC +
Preference number: 3 (lower is better)
Translates to: LNQQSVNPFMYN*THPHKLHVGES
Trigger: GCTTTCACCAACATGGAGTTTGTGGGGGTGGGTCCAGTTATACATGAAAGGGTTTACAGATTGTTGGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGCCAGTGTCTTCCTGTaGCAAATGGAAATCAGGTCA +
Preference number: 3 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSASVFL*QMEIRS
Trigger: TGACCTGATTTCCATTTGCAACAGGAAGACACTGGC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGGTTACGGCTTTGAGTaGTTACAGAAAGCAACTTCA +
Preference number: 3 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVGYGFE*LQKATS
Trigger: TGAAGTTGCTTTCTGTAACAACTCAAAGCCGTAACC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAACAGGGTTACGGCTTaGAGTTGTTACAGAAAGCAA +
Preference number: 3 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVNRVTA*SCYRKQ
Trigger: TTGCTTTCTGTAACAACTCAAAGCCGTAACCCTGTT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTCTATACTTCCCCGTaGCCTCAGTACATCCTCATC +
Preference number: 3 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFYTSP*PQYILI
Trigger: GATGAGGATGTACTGAGGCAACGGGGAAGTATAGAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCCCTTGGCTTTTGTCTaGGATGTTTCTATACTTCCC +
Preference number: 3 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSPLAFV*DVSILP
Trigger: GGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGGTTACGGCTTTGAGTaGTTACAGAAAGCAACTTCA +
Preference number: 3 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSGYGFE*LQKATS
Trigger: TGAAGTTGCTTTCTGTAACAACTCAAAGCCGTAACC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CCA 72 bp CACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTaGATTACTTACGTATTCTTATACAGGTTCTCAAAG +
Preference number: 3 (lower is better)
Translates to: HWRSWPLNSSQL*ITYVFLYRFSK
Trigger: CTTTGAGAACCTGTATAAGAATACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTAAGCTGATGAATAAATaGCCCAGATTGGTCAAATCA +
Preference number: 3 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSKLMNK*PRLVKS
Trigger: TGATTTGACCAATCTGGGCAATTTATTCATCAGCTT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR TCA 72 bp AGACTTGTATCTGGCACTAAAACAGGGTTACGGCTTTaGGTTGTTACAGAAAGCAACTTCATGCTAAAATTT +
Preference number: 3 (lower is better)
Translates to: RLVSGTKTGLRL*VVTESNFMLKF
Trigger: AAATTTTAGCATGAAGTTGCTTTCTGTAACAACTCAAAGCCGTAACCCTGTTTTAGTGCCAGATACAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGCTGAGTCGTCGGGGTaGTGCCACGCTGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVAESSG*CHAGSA
Trigger: GGCAGATCCAGCGTGGCATCACCCCGACGACTCAGC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGCCTCTCCCCGCTGGTaGCAGGTTCATGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVASPRW*QVHGWG
Trigger: TCCCCAGCCATGAACCTGCCACCAGCGGGGAGAGGC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGGGGTGATGCCACGCTaGATCTGCCTGGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVGVMPR*ICLGTV
Trigger: CACAGTCCCCAGGCAGATCCAGCGTGGCATCACCCC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCTCATCTCTGTCTCCTaGCACACCTCGCCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLISVS*HTSPRR
Trigger: CCTCCTCGGCGAGGTGTGTCAGGAGACAGAGATGAG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGCCCTTGGGTTGGTCTaGGGACTTAGCAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVALGLV*GLSSPT
Trigger: TGTGGGGCTGCTAAGTCCTCAGACCAACCCAAGGGC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGCTCGTGTCTGTGTGTaGCGGGGAAAGGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVARVCV*RGKGSC
Trigger: GCAGCTTCCCTTTCCCCGGCACACACAGACACGAGC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360351.8
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAGACTTGGGGGTTCCTaGTGTGTGAGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVRLGGS*CVRGPG
Trigger: CCCAGGACCCCTCACACACCAGGAACCCCCAAGTCT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACCGCCACCTGGCCTGTaGCGGATGTTCTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVPPPGL*RMFFRE
Trigger: CTCTCTGAAGAACATCCGCCACAGGCCAGGTGGCGG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACACACGTCCGCCACCTaGCCTGTGGCGGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVHTSAT*PVADVL
Trigger: AAGAACATCCGCCACAGGCCAGGTGGCGGACGTGTG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTAGGGGTAGTGGGTGTTaGGGTACCACTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVRGSGC*GTTLPC
Trigger: GCAGGGAAGAGTGGTACCTCAACACCCACTACCCCT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGGCTGTCAGCGTCCATaGTGGAGTCGTCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVGCQRP*WSRQWW
Trigger: CCACCATTGACGACTCCATCATGGACGCTGACAGCC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACCATTTGGCCCTTACTaGGGCCCTTGGGTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVPFGPY*GPWVGL
Trigger: CAGACCAACCCAAGGGCCTCAGTAAGGGCCAAATGG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGTGCCCTGTGACCCATaGTCTCCAAAGGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVVPCDP*SPKAPS
Trigger: AGAGGGTGCCTTTGGAGAGCATGGGTCACAGGGCAC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGCCCTGCTTAGCGAGTaGAGCAGTGACATCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVALLSE*SSDILS
Trigger: GCTGAGGATGTCACTGCTGCACTCGCTAAGCAGGGC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACAGACAGACGCAGTCTaGAAGCCACCAGCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVQTDAV*KPPARV
Trigger: GACACGAGCTGGTGGCTTGCAGACTGCGTCTGTCTG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGCCGAGGAGGGAGAATaGAGGAAGGTCTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVAEEGE*RKVLGE
Trigger: CTCTCCCAAGACCTTCCTCCATTCTCCCTCCTCGGC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTGGCTCTGACCTGGTaGTCCGCCGTGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLALTW*SAVLKK
Trigger: CTTCTTCAGCACGGCGGACCACCAGGTCAGAGCCAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTGGCTCTGACCTGGTaGTCCGCCGTGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLALTW*SAVLKK
Trigger: CTTCTTCAGCACGGCGGACCACCAGGTCAGAGCCAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGAATTGGCTCTGACCTaGTGGTCCGCCGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVELALT*WSAVLK
Trigger: CTTCAGCACGGCGGACCACCAGGTCAGAGCCAATTC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACACTCGGCACCAAGATaGCAGACTTGGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVHSAPR*QTWGFL
Trigger: CAGGAACCCCCAAGTCTGCCATCTTGGTGCCGAGTG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGCAAAACGCACGCTGTaGGACCCTGACTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVAKRTL*DPDSPS
Trigger: TGAAGGGGAGTCAGGGTCCCACAGCGTGCGTTTTGC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATCTCTCAGGGGAAGCTaGAGCCTCTGGGGAACCATC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVSLRGS*SLWGTI
Trigger: GATGGTTCCCCAGAGGCTCCAGCTTCCCCTGAGAGA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGCACAGACACTGAGATaGAGGGGGCTAGGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVAQTLR*RGLGVH
Trigger: GTGGACTCCTAGCCCCCTCCATCTCAGTGTCTGTGC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGGTGCTGAGGTCCAGTaGGGTGCCTTTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVGAEVQ*GAFASS
Trigger: AGATGAAGCAAAGGCACCTCACTGGACCTCAGCACC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCCCCTGCTCCGCCTTaGTCCTTAATCTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSPAPP*SLISGG
Trigger: TCCACCTGAGATTAAGGATCAAGGCGGAGCAGGGGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGCCAAAGTGGCAAGCTaGGGAGATTCGAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVAKVAS*GDSSRL
Trigger: CAACCTGCTCGAATCTCCTCAGCTTGCCACTTTGGC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACCTGTCCACTGGGGGTaGAAGTATCCCTTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVPVHWG*KYPFAA
Trigger: TGCAGCAAAGGGATACTTTCACCCCCAGTGGACAGG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACCCAGGTCAGTTATCTaGAGGGTGTCTGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVPRSVI*RVSERK
Trigger: CTTCCGCTCAGACACCCTTCAGATAACTGACCTGGG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATGCATCTGCCTCCTaGGGTGCTTTGGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVNASAS*GALDEG
Trigger: CCCCTCATCCAAAGCACCGCAGGAGGCAGATGCATT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCTTTCCACCTCAGGCTaGTCTAGGGCTGCAAAACGC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLSTSG*SRAAKR
Trigger: GCGTTTTGCAGCCCTAGAGCAGCCTGAGGTGGAAAG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCCAAGATGGCAGACTTaGGGGTTCCTGGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVPRWQT*GFLVCE
Trigger: CTCACACACCAGGAACCCCCAAGTCTGCCATCTTGG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGAGGGCCAGGAGATATaGGGGCAACTAAACCCCACT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVEGQEI*GQLNPT
Trigger: AGTGGGGTTTAGTTGCCCCCATATCTCCTGGCCCTC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCCAGTGCAGGTGTGGTaGCTGGAAGGTAATCATCCC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVPVQVW*LEGNHP
Trigger: GGGATGATTACCTTCCAGCCACCACACCTGCACTGG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCCACAAATTCCTCCCTaGCACCTGAGACACCCAGGT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVPQIPP*HLRHPG
Trigger: ACCTGGGTGTCTCAGGTGCCAGGGAGGAATTTGTGG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGGAAGCTGGAGCCTCTaGGGAACCATCTTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVGSWSL*GTIFGF
Trigger: GAACCCAAAGATGGTTCCCCAGAGGCTCCAGCTTCC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACTGGTGGCAGGTTCATaGCTGGGGAACCTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLVAGS*LGNLCR
Trigger: TCTACACAGGTTCCCCAGCCATGAACCTGCCACCAG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTAGTGCCTGGTGTGCGTaGAGAATAACTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSAWCA*RITWWG
Trigger: ACCCCACCAAGTTATTCTTCACGCACACCAGGCACT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGAGATTCGAGCAGGTTaGTGCTTCCAGACGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVEIRAG*CFQTRR
Trigger: TCTCCTCGTCTGGAAGCATCAACCTGCTCGAATCTC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCACAGAAGCCAATCTTaGCCTTGTGCCTGCCAGATC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVHRSQS*PCACQI
Trigger: GATCTGGCAGGCACAAGGTCAAGATTGGCTTCTGTG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACATCTTCCTCCACTGTaGCAGTCTGTTCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVHLPPL*QSVLRQ
Trigger: CTGCCTCAGAACAGACTGTCACAGTGGAGGAAGATG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGTAGAGGACCCACTTaGTCCTCAGCCCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVCRGPT*SSAPSS
Trigger: AGATGAAGGGGCTGAGGATCAAGTGGGTCCTCTACA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGCCTTTGAGAACTGCTaGAGAATCCTTCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVAFENC*RILLRE
Trigger: CTCCCGGAGAAGGATTCTGCAGCAGTTCTCAAAGGC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGAGAGTGCTGTACCCTaGTTCTTGTGCTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVESAVP*FLCWRT
Trigger: AGTCCTCCAGCACAAGAAGCAGGGTACAGCACTCTC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACTCAACACCCATAAATaGATCTGCCTCCTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLNTHK*ICLLRC
Trigger: GCACCGCAGGAGGCAGATGCATTTATGGGTGTTGAG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGTCAGCCCATCACGCTaGTGGAACTCAGCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVVSPSR*WNSAGK
Trigger: TTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGAC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAATGATCTCAGCCCCATaGTCCACACGGGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVMISAP*STRALA
Trigger: TGCTAAAGCCCGTGTGGACCATGGGGCTGAGATCAT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTATGATCTCAGCCCCATaGTCCACACGGGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVMISAP*STRALA
Trigger: TGCTAAAGCCCGTGTGGACCATGGGGCTGAGATCAT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACACGCTGGATCTGCCTaGGGACTGTGTAATGATCTC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVHAGSA*GLCNDL
Trigger: GAGATCATTACACAGTCCCCAGGCAGATCCAGCGTG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAATTATCCCCACAGGCTaGCTCTCTGGCTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVIIPTG*LSGSLA
Trigger: AGCTAGAGAGCCAGAGAGCCAGCCTGTGGGGATAAT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTATTATCCCCACAGGCTaGCTCTCTGGCTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVIIPTG*LSGSLA
Trigger: AGCTAGAGAGCCAGAGAGCCAGCCTGTGGGGATAAT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGCAGGTGTGGTGGCTaGAAGGTAATCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVCRCGG*KVIIPF
Trigger: GAAGGGGATGATTACCTTCCAGCCACCACACCTGCA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGGACTGATTTCCTCCTaGCAACCTCAGCATCTGCAC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVGLISS*QPQHLH
Trigger: GTGCAGATGCTGAGGTTGCCAGGAGGAAATCAGTCC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTGTCTACAGCCTCCTaGTGCACCAAGTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLSTAS*CTKSGL
Trigger: CAAGCCTGACTTGGTGCACCAGGAGGCTGTAGACAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTAGCCCATCACGCTGCTaGAACTCAGCAGGTAAATCC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSPSRC*NSAGKS
Trigger: GGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCCTGCAGAGAGTCTTaGCCTTCACCTACACACCCA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSCRES*PSPTHP
Trigger: TGGGTGTGTAGGTGAAGGCCAAGACTCTCTGCAGGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGCACTAGACTCCATTTaGCCCTTACTGAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVALDSI*PLLRPL
Trigger: CAAGGGCCTCAGTAAGGGCCAAATGGAGTCTAGTGC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCTCAGGTGGATGTaGGTGTGCAGATGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVNLRWM*VCRCLC
Trigger: ACAGAGGCATCTGCACACTCACATCCACCTGAGATT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTGTTTCTCTGTCAGCTaGGGTCAGCTCTCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVCFSVS*GQLSVD
Trigger: ATCAACGGAGAGCTGACCTCAGCTGACAGAGAAACA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACTCATCTCTGTCTCCTaGCACACCTCGCCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLISVS*HTSPRR
Trigger: CCTCCTCGGCGAGGTGTGTCAGGAGACAGAGATGAG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTGGAGGAGTACGTATaGTGGCGACCTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLEEYV*WRPSSH
Trigger: GTGAGAAGAAGGTCGCCATCATACGTACTCCTCCAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGCTGAGTCGTCGGGGTaGTGCCACGCTGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVAESSG*CHAGSA
Trigger: GGCAGATCCAGCGTGGCATCACCCCGACGACTCAGC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTAGCTATCTCTGGCACTaGACTAAGACCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSYLWH*TKTLLC
Trigger: GCAGAGAAGGGTCTTAGTTCAGTGCCAGAGATAGCT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAACTGGGAGCCAGAGCTaGTTCCCCACCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVTGSQS*FPTCCC
Trigger: ACAGCAGCAGGTGGGGAATCAGCTCTGGCTCCCAGT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGACAAGTCCTTCCCCTaGTCCGCCTTGATCCTTAAT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVDKSFP*SALILN
Trigger: ATTAAGGATCAAGGCGGAGCAGGGGAAGGACTTGTC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTCACCTTTCAGGACTaGTACAGCCTCAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVFTFQD*YSLSSD
Trigger: GTCACTGCTGAGGCTGTAGCAGTCCTGAAAGGTGAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTCACCTTTCAGGACTaGTACAGCCTCAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVFTFQD*YSLSSD
Trigger: GTCACTGCTGAGGCTGTAGCAGTCCTGAAAGGTGAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCAGGAGTGCCTGGTGTaGGTGAAGAATAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVQECLV*VKNNLV
Trigger: CACCAAGTTATTCTTCACGCACACCAGGCACTCCTG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGACTCTTCCGGCTGCTaGCAGTTTCACTTCAATCAG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVDSSGC*QFHFNQ
Trigger: CTGATTGAAGTGAAACTGGCAGCAGCCGGAAGAGTC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGCCTGGGCTTCAGCTaGCTCTTCTACTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVCLGFS*LFYFKL
Trigger: GAGTTTGAAGTAGAAGAGGCAGCTGAAGCCCAGGCA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTCATCCTCCCTGTATaGGAATCCATTGGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVFILPV*ESIGAS
Trigger: CGAAGCGCCAATGGATTCCCATACAGGGAGGATGAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAGAAGAGCGCTTTTCTaGGCTCTTGGTTACTCCGTC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVRRALF*ALGYSV
Trigger: GACGGAGTAACCAAGAGCCCAGAAAAGCGCTCTTCT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAGGTCTGGCAGTGGTTaGTTAATAAGCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVRSGSG*LISRSC
Trigger: GCAGCTTCGGCTTATTAACCAACCACTGCCAGACCT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACACACGTCCGCCACCTaGCCTGTGGCGGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVHTSAT*PVADVL
Trigger: AAGAACATCCGCCACAGGCCAGGTGGCGGACGTGTG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACATCCTCAGCCAAAGTaGCAAGCTGAGGAGATTCGA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVHPQPK*QAEEIR
Trigger: TCGAATCTCCTCAGCTTGCCACTTTGGCTGAGGATG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTATCTTTGGCAGTAGCTaGGCCACTGGTTTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVIFGSS*ATGLLQ
Trigger: CTGCAACAAACCAGTGGCCCAGCTACTGCCAAAGAT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAATCTTTGGCAGTAGCTaGGCCACTGGTTTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVIFGSS*ATGLLQ
Trigger: CTGCAACAAACCAGTGGCCCAGCTACTGCCAAAGAT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGTCATACTTGTAGGTaGGATGTCAGCCCATCACGC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVCHTCR*DVSPSR
Trigger: GCGTGATGGGCTGACATCCCACCTACAAGTATGACA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTGTCATACTTGTAGGTaGGATGTCAGCCCATCACGC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVCHTCR*DVSPSR
Trigger: GCGTGATGGGCTGACATCCCACCTACAAGTATGACA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACCAGCCGTACCTAGCTaGTGTTACACAGGTGTCATA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVPAVPS*CYTGVI
Trigger: TATGACACCTGTGTAACACCAGCTAGGTACGGCTGG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCCAGCCGTACCTAGCTaGTGTTACACAGGTGTCATA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVPAVPS*CYTGVI
Trigger: TATGACACCTGTGTAACACCAGCTAGGTACGGCTGG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTAGGTCAGCTCTCCGTTaGTCCCATTCTCTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVRSALR*SHSLWY
Trigger: ATACCAAAGAGAATGGGATCAACGGAGAGCTGACCT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCAGCAGTGACTACTTaGACTATCCTTGCAGACACC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSAVTT*TILADT
Trigger: GGTGTCTGCAAGGATAGTTCAAGTAGTCACTGCTGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATCAGCAGTGACTACTTaGACTATCCTTGCAGACACC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVSAVTT*TILADT
Trigger: GGTGTCTGCAAGGATAGTTCAAGTAGTCACTGCTGA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACTACAGCCTCAGCAGTaGCTACTTGAACTATCCTTG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLQPQQ*LLELSL
Trigger: CAAGGATAGTTCAAGTAGTCACTGCTGAGGCTGTAG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAACGAGGAGACATTGCTaGGTCGTCGGGGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVTRRHC*VVGVMP
Trigger: TGGCATCACCCCGACGACTCAGCAATGTCTCCTCGT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACGGTTAGAGACAAGCTaGAGAATCAGCGCATATGCA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVRLETS*RISAYA
Trigger: TGCATATGCGCTGATTCTTCAGCTTGTCTCTAACCG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGGAGTCAATTCCTGTTaGTCGTGGAACTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVGVNSC*SWNSIF
Trigger: GAAGATGGAGTTCCACGATCAACAGGAATTGACTCC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGGACTGTGTACTTATTaGACACACAGTAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVGLCTY*THSSPG
Trigger: ACCTGGGCTACTGTGTGTTCAATAAGTACACAGTCC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAACTGTCTTGAACAGGTaGTGGCAATGGGACTGTGTA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVTVLNR*WQWDCV
Trigger: TACACAGTCCCATTGCCATCACCTGTTCAAGACAGT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTGGTATTTGAATAGGTaGCCTGTGACCCATGCTCTC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVWYLNR*PVTHAL
Trigger: GAGAGCATGGGTCACAGGGCACCTATTCAAATACCA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATATTCACAAGCCCTaGTTAGCGAGTGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVNIHKP*LASAAV
Trigger: CACTGCTGCACTCGCTAAGCAGGGCTTGTGAATATT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATGGGCCTCTGCACTCTaGGCTGTGACACTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVWASAL*AVTLGS
Trigger: GCTCCCCAGTGTCACAGCGCAGAGTGCAGAGGCCCA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGTATGGGAATCCATTaGCGCTTCGGACAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVCMGIH*RFGQVL
Trigger: AAGGACTTGTCCGAAGCGCCAATGGATTCCCATACA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTGTATGGGAATCCATTaGCGCTTCGGACAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVCMGIH*RFGQVL
Trigger: AAGGACTTGTCCGAAGCGCCAATGGATTCCCATACA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATGGAGGAAGGTCTTaGGAGAGAAGAGCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVNGGRS*ERRALF
Trigger: GAAAAGCGCTCTTCTCTCCCAAGACCTTCCTCCATT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACACTCGGCACCAAGATaGCAGACTTGGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVHSAPR*QTWGFL
Trigger: CAGGAACCCCCAAGTCTGCCATCTTGGTGCCGAGTG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTAGTCGCAGGAGATTTTaGAGGAGTACGTATGATGGC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSRRRF*RSTYDG
Trigger: GCCATCATACGTACTCCTCCAAAATCTCCTGCGACT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACTTCAGGTCTGGCAGTaGTTGGTTAATAAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLQVWQ*LVNKPK
Trigger: CTTCGGCTTATTAACCAACCACTGCCAGACCTGAAG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGGGGTGATGCCACGCTaGATCTGCCTGGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVGVMPR*ICLGTV
Trigger: CACAGTCCCCAGGCAGATCCAGCGTGGCATCACCCC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGCTTTTCTGGGCTCTTaGTTACTCCGTCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVAFLGS*LLRQRL
Trigger: AAGTCTCTGACGGAGTAACCAAGAGCCCAGAAAAGC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGACTCCTTTTCCTTCTaGTCTGAAGGCTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVDSFSF*SEGSAV
Trigger: TACAGCTGAGCCTTCAGACCAGAAGGAAAAGGAGTC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTCATCATGAGGAGATaGTCTCCTTTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVFIMRR*SPFHLR
Trigger: CCTGAGGTGGAAAGGAGACCATCTCCTCATGATGAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGTATGGCAGTTACACTaGTTGCCATATCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVVWQLH*LPYPLG
Trigger: ACCCAGTGGATATGGCAACCAGTGTAACTGCCATAC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTAGCTGAGAATGAGTaGTGTGGGTTTGCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLAENE*CGFAPR
Trigger: CCTAGGAGCAAACCCACACCACTCATTCTCAGCTAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCACGCCTCTCCCCGCTaGTGGCAGGTTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFHASPR*WQVHGW
Trigger: CCAGCCATGAACCTGCCACCAGCGGGGAGAGGCGTG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATCCCCTGCTCCGCCTTaGTCCTTAATCTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVSPAPP*SLISGG
Trigger: TCCACCTGAGATTAAGGATCAAGGCGGAGCAGGGGA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACTGCTTCCTCCACTGTaGCAGTCTGTTCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLLPPL*QSVLRQ
Trigger: CTGCCTCAGAACAGACTGTCACAGTGGAGGAAGCAG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392194.5
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACTCATCTCTGTCTCCTaGCACACCTCGCCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLISVS*HTSPRR
Trigger: CCTCCTCGGCGAGGTGTGTCAGGAGACAGAGATGAG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGCTGAGTCGTCGGGGTaGTGCCACGCTGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSAESSG*CHAGSA
Trigger: GGCAGATCCAGCGTGGCATCACCCCGACGACTCAGC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCCGTTGGCATTTCGATaGACCAGTCCTTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVPLAFR*TSPFVL
Trigger: AAGAACAAAAGGACTGGTTCATCGAAATGCCAACGG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATCTACAACTGGAATGTaGGCATCTTTGGGTAAGGTC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVSTTGM*ASLGKV
Trigger: GACCTTACCCAAAGATGCTCACATTCCAGTTGTAGA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGCTGCACAGTCTCTTaGTTTATGGCCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVCCTVS*FMASFS
Trigger: AGAAAAGGAGGCCATAAATCAAGAGACTGTGCAGCA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGAAAGGAGACTCACATaGTATCTCCGCTTGAGTACT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVERRLT*YLRLST
Trigger: AGTACTCAAGCGGAGATATCATGTGAGTCTCCTTTC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACCCAGGTCAGTTATCTaGAGGGTGTCTGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVPRSVI*RVSERK
Trigger: CTTCCGCTCAGACACCCTTCAGATAACTGACCTGGG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAACTCTTCTTCATCATaGGGAGATGGTCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVNSSSS*GDGLLS
Trigger: GGAAAGGAGACCATCTCCTCATGATGAAGAAGAGTT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGAGTTGGTTCCTAAATaGACGTGGCCTTTGAAACTC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVELVPK*TWPLKL
Trigger: GAGTTTCAAAGGCCACGTTCATTTAGGAACCAACTC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGAGTTGGTTCCTAAATaGACGTGGCCTTTGAAACTC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVELVPK*TWPLKL
Trigger: GAGTTTCAAAGGCCACGTTCATTTAGGAACCAACTC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCTGGAGACACCTCCTTaGCCTCTTTTACACTTTTCT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLETPP*PLLHFS
Trigger: AGAAAAGTGTAAAAGAGGTCAAGGAGGTGTCTCCAG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGTAACAATTTGTACCTaGCCCCCTTTAGGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVVTICT*PPLGWY
Trigger: ATACCAGCCTAAAGGGGGGCAGGTACAAATTGTTAC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCTTCTTCCGTGCCTTaGATGTCCTTTTTATCAGGG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSSSVP*MSFLSG
Trigger: CCCTGATAAAAAGGACATGCAAGGCACGGAAGAAGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACCAATCTTGACCTTGTaGCTGCCAGATCTAGCATTT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVPILTL*LPDLAF
Trigger: AAATGCTAGATCTGGCAGGCACAAGGTCAAGATTGG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTTGACTCTTCCGGCTaGTGCCAGTTTCACTTCAAT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVFDSSG*CQFHFN
Trigger: ATTGAAGTGAAACTGGCAGCAGCCGGAAGAGTCAAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTGTCACCAGAGATATaGGCGGATGCTTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLSPEI*ADASLS
Trigger: TGACAAAGAAGCATCCGCGCATATCTCTGGTGACAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTGTCACCAGAGATATaGGCGGATGCTTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLSPEI*ADASLS
Trigger: TGACAAAGAAGCATCCGCGCATATCTCTGGTGACAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAACTAAGACCCTTCTCTaGTTTCTCAGAGGATGCATC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVTKTLL*FLRGCI
Trigger: GATGCATCCTCTGAGAAAGCAGAGAAGGGTCTTAGT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGAGATGTTTCCTTCTTaGCCTCATCAGCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVEMFPS*PHQLSR
Trigger: CCTTGAAAGCTGATGAGGGCAAGAAGGAAACATCTC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACTCACTCTGAATCTCTaGTGGTTCAGATACGATCGT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLTLNL*WFRYDR
Trigger: ACGATCGTATCTGAACCAGCAGAGATTCAGAGTGAG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAGACTTGGGGGTTCCTaGTGTGTGAGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVRLGGS*CVRGPG
Trigger: CCCAGGACCCCTCACACACCAGGAACCCCCAAGTCT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCAGAGAGCCACATTTaGATGTCACATGGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSESHI*MSHGLG
Trigger: ACCTAAGCCATGTGACATCCAAATGTGGCTCTCTGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACACACGTCCGCCACCTaGCCTGTGGCGGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVHTSAT*PVADVL
Trigger: AAGAACATCCGCCACAGGCCAGGTGGCGGACGTGTG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGAAAGGGACTTGGCATaGGAGAATCAAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVERDLA*ENQTVS
Trigger: GGAAACAGTTTGATTCTCCCATGCCAAGTCCCTTTC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGAATGTGAGCATCTTTaGGTAAGGTCATTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVECEHL*VRSLPL
Trigger: CAGAGGCAATGACCTTACCCAAAGATGCTCACATTC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACCAGTGCAGGTGTGGTaGCTGGAAGGTAATCATCCC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVPVQVW*LEGNHP
Trigger: GGGATGATTACCTTCCAGCCACCACACCTGCACTGG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCCTTTGTGTTCACTTaGGCAGGTCTCCACAAATTC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSFVFT*AGLHKF
Trigger: GAATTTGTGGAGACCTGCCCAAGTGAACACAAAGGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGTGTGTGTGTGTGTGTaGAGAAGGTCACTACAATCA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVVCVCV*RRSLQS
Trigger: TGATTGTAGTGACCTTCTCCACACACACACACACAC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTTGTAACAGTGTGTTaGAACCTCGGAATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVFVTVC*NLGIPA
Trigger: TGCTGGGATTCCGAGGTTCCAACACACTGTTACAAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTTGTAACAGTGTGTTaGAACCTCGGAATCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVFVTVC*NLGIPA
Trigger: TGCTGGGATTCCGAGGTTCCAACACACTGTTACAAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTATGTGGGGCCCCTGCTaGGGCACTCTCTTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFMWGPC*GTLFGN
Trigger: GTTCCCGAAGAGAGTGCCCCAGCAGGGGCCCCACAT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTACTGGGAGCCAGAGCTaGTTCCCCACCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFTGSQS*FPTCCF
Trigger: GAAGCAGCAGGTGGGGAATCAGCTCTGGCTCCCAGT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392194.5
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGGTGGTCCGCCGTGCTaGAGAAGAGATAGAACTGTT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVGGPPC*RRDRTV
Trigger: AACAGTTCTATCTCTTCTTCAGCACGGCGGACCACC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAGGGGTAGTGGGTGTTaGGGTACCACTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVRGSGC*GTTLPC
Trigger: GCAGGGAAGAGTGGTACCTCAACACCCACTACCCCT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGAGATTCGAGCAGGTTaGTGCTTCCAGACGAGGAGA +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVEIRAG*CFQTRR
Trigger: TCTCCTCGTCTGGAAGCATCAACCTGCTCGAATCTC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACTTTTCCTTCTGGTCTaGAGGCTCAGCTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLFLLV*RLSCRG
Trigger: CCCTCTACAGCTGAGCCTTCAGACCAGAAGGAAAAG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGCTCTGTGGAGGTCTaGATTATGCCTATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVCSVEV*IMPISS
Trigger: TGAAGAAATAGGCATAATTCAGACCTCCACAGAGCA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTGCTCTGTGGAGGTCTaGATTATGCCTATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVCSVEV*IMPISS
Trigger: TGAAGAAATAGGCATAATTCAGACCTCCACAGAGCA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACACAGAAGCCAATCTTaGCCTTGTGCCTGCCAGATC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVHRSQS*PCACQI
Trigger: GATCTGGCAGGCACAAGGTCAAGATTGGCTTCTGTG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTTCACTTCAATCAGTaGAAGGTCTGTGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVFHFNQ*KVCGQI
Trigger: GATTTGGCCACAGACCTTTCACTGATTGAAGTGAAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATCTTCTTTTGGCCCCTaGATAAATTCCATCTGGACA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVSSFGP*INSIWT
Trigger: TGTCCAGATGGAATTTATTCAGGGGCCAAAAGAAGA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTATGTTTCTCAAGAGATaGTCTCCGAGCTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVMFLKR*SPSFLF
Trigger: GAAAAGGAAGCTCGGAGATCATCTCTTGAGAAACAT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTACTGGGAGCCAGAGCTaGTTCCCCACCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFTGSQS*FPTCCC
Trigger: ACAGCAGCAGGTGGGGAATCAGCTCTGGCTCCCAGT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTGGACTGACATACTCTaGTATAATTATCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVWTDIL*YNYPGP
Trigger: GGGACCTGGATAATTATATCAGAGTATGTCAGTCCA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTACTACAACCAGCCATTaGAGAAATGCCTTTCTATGG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVTTTSH*RNAFLW
Trigger: CCATAGAAAGGCATTTCTTCAATGGCTGGTTGTAGT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAACTACAACCAGCCATTaGAGAAATGCCTTTCTATGG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVTTTSH*RNAFLW
Trigger: CCATAGAAAGGCATTTCTTCAATGGCTGGTTGTAGT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTACACGGGCTTTAGCATaGTCTCTGAAGTTCAACTTT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVTRALA*SLKFNF
Trigger: AAAGTTGAACTTCAGAGAGCATGCTAAAGCCCGTGT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAACACGGGCTTTAGCATaGTCTCTGAAGTTCAACTTT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVTRALA*SLKFNF
Trigger: AAAGTTGAACTTCAGAGAGCATGCTAAAGCCCGTGT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAGGGGCTTTCTCCAGTaGAGGTGTGGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVRGFLQ*RCGGWK
Trigger: CTTCCAGCCACCACACCTGCACTGGAGAAAGCCCCT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACTCAACACCCATAAATaGATCTGCCTCCTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLNTHK*ICLLRC
Trigger: GCACCGCAGGAGGCAGATGCATTTATGGGTGTTGAG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCTACAGCCTCCTGGTaGACCAAGTCAGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSTASW*TKSGLA
Trigger: GGCCAAGCCTGACTTGGTGCACCAGGAGGCTGTAGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGTCAGCCCATCACGCTaGTGGAACTCAGCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVVSPSR*WNSAGK
Trigger: TTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGAC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGCCGAGGAGGGAGAATaGAGGAAGGTCTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVAEEGE*RKVLGE
Trigger: CTCTCCCAAGACCTTCCTCCATTCTCCCTCCTCGGC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTGGCTCTGACCTGGTaGTCCGCCGTGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLALTW*SAVLKK
Trigger: CTTCTTCAGCACGGCGGACCACCAGGTCAGAGCCAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACACTCGGCACCAAGATaGCAGACTTGGGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVHSAPR*QTWGFL
Trigger: CAGGAACCCCCAAGTCTGCCATCTTGGTGCCGAGTG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCCGCCACCTGGCCTGTaGCGGATGTTCTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFPPPGL*RMFFRE
Trigger: CTCTCTGAAGAACATCCGCCACAGGCCAGGTGGCGG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAATGATCTCAGCCCCATaGTCCACACGGGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVMISAP*STRALA
Trigger: TGCTAAAGCCCGTGTGGACCATGGGGCTGAGATCAT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGGGGTGATGCCACGCTaGATCTGCCTGGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSGVMPR*ICLGTV
Trigger: CACAGTCCCCAGGCAGATCCAGCGTGGCATCACCCC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCTGTGGTAGGCTCTTaGTCTTTCTGTTCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSVVGS*SFCSEK
Trigger: TTTCTCAGAACAGAAAGACCAAGAGCCTACCACAGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACTTGTGCTGGAGGACTaGGCTGGGATTCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLVLED*AGILFL
Trigger: CAGGAAAAGAATCCCAGCCCAGTCCTCCAGCACAAG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATCAGTGAAAGGTCTGTaGCCAAATCTCTTCGAACTT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVSVKGL*PNLFEL
Trigger: AAGTTCGAAGAGATTTGGCCACAGACCTTTCACTGA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTCCACCTTTTTGGATaGTTCTACCTCAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVFHLFG*FYLSYL
Trigger: GAGATAGCTGAGGTAGAACCATCCAAAAAGGTGGAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCTTGTTCCACCTTTTTaGATGGTTCTACCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLVPPF*MVLPQL
Trigger: TAGCTGAGGTAGAACCATCCAAAAAGGTGGAACAAG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACCTCCTGCGGTGCTTTaGATGAGGGGGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVPPAVL*MRGSCP
Trigger: AGGACATGACCCCCTCATCCAAAGCACCGCAGGAGG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACGTGATGGATATATCTaGGGTCTCTTTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVRDGYI*GLFAFF
Trigger: GAAGAAAGCAAAGAGACCCCAGATATATCCATCACG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCTCTCAGGGGAAGCTaGAGCCTCTGGGGAACCATC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSLRGS*SLWGTI
Trigger: GATGGTTCCCCAGAGGCTCCAGCTTCCCCTGAGAGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTGGAGTCGTCAATGGTaGTCTCATCTTTGTAATCGT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVWSRQW*SHLCNR
Trigger: ACGATTACAAAGATGAGACCACCATTGACGACTCCA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGGAGTCGTCAATGGTaGTCTCATCTTTGTAATCGT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVWSRQW*SHLCNR
Trigger: ACGATTACAAAGATGAGACCACCATTGACGACTCCA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGTTCACTGGAGAAGTTaGCCTTTAAACTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVVHWRS*PLNSSQ
Trigger: CTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGTTCACTGGAGAAGTTaGCCTTTAAACTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVVHWRS*PLNSSQ
Trigger: CTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAAATCCAGAGAGAGTTaGTTCCTAAATGAACGTGGC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVKSRES*FLNERG
Trigger: GCCACGTTCATTTAGGAACCAACTCTCTCTGGATTT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACTGAGGCCCTTGGGTTaGTCTGAGGACTTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLRPLG*SEDLAA
Trigger: GGCTGCTAAGTCCTCAGACCAACCCAAGGGCCTCAG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673860.1
3UTR CAA 72 bp TTGCTCCTAGGGTTTCTTGTATGGCAGTTACACTGGTaGCCATATCCACTGGGTCACCAAAAAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: LLLGFLVWQLHW*PYPLGHQKAPV
Trigger: CACAGGTGCTTTTTGGTGACCCAGTGGATATGGCAACCAGTGTAACTGCCATACAAGAAACCCTAGGAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAATCTCAGGTGGATGTaGGTGTGCAGATGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVNLRWM*VCRCLC
Trigger: ACAGAGGCATCTGCACACTCACATCCACCTGAGATT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCCCCTGCTCCGCCTTaGTCCTTAATCTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSPAPP*SLISGG
Trigger: TCCACCTGAGATTAAGGATCAAGGCGGAGCAGGGGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGGGGTAGTGGGTGTTaGGGTACCACTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFRGSGC*GTTLPC
Trigger: GCAGGGAAGAGTGGTACCTCAACACCCACTACCCCT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTACGAGGAGACATTGCTaGGTCGTCGGGGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFTRRHC*VVGVMP
Trigger: TGGCATCACCCCGACGACTCAGCAATGTCTCCTCGT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGTGAAGCTTCCCCCTTaGAAGGGACTTGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVVKLPP*KGLGMG
Trigger: TCCCATGCCAAGTCCCTTTCAAGGGGGAAGCTTCAC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACATATCAAGCTCAGCTaGTGTTGCAGCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVHIKLS*CCSSNS
Trigger: GGAGTTGGAGCTGCAACATCAGCTGAGCTTGATATG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACCCAGGTCTTCGAGCTaGCTGTCCGTTTTTACAATG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVPRSSS*LSVFTM
Trigger: CATTGTAAAAACGGACAGTCAGCTCGAAGACCTGGG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAATTTTAACATCTAGTTaGCCCTGGACAGCAAAATCC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVILTSS*PWTAKS
Trigger: GGATTTTGCTGTCCAGGGTCAACTAGATGTTAAAAT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATCAAGGACTCCATGGTaGGACTTTCATGCTCACCAC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVSRTPW*DFHAHH
Trigger: GTGGTGAGCATGAAAGTCTCACCATGGAGTCCTTGA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGGCTGTCAGCGTCCATaGTGGAGTCGTCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFGCQRP*WSRQWW
Trigger: CCACCATTGACGACTCCATCATGGACGCTGACAGCC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACTAACTGTTCTGTCATaGTGCTCCTATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLTVLS*CSYHHL
Trigger: AAGATGATGATAGGAGCATCATGACAGAACAGTTAG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCTAACTGTTCTGTCATaGTGCTCCTATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLTVLS*CSYHHL
Trigger: AAGATGATGATAGGAGCATCATGACAGAACAGTTAG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGTGAGAGGAACTAATTaGTTTGTGAGTTCTAGACTG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVVRGTN*FVSSRL
Trigger: CAGTCTAGAACTCACAAATCAATTAGTTCCTCTCAC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCCTTGTTATTTCTCCTaGAACTATTCAAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVPCYFS*NYSRKW
Trigger: CCACTTCCTTGAATAGTTGCAGGAGAAATAACAAGG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATCTGCCATTCTTCAATaGCTTGTTATTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVSAILQ*LVISPA
Trigger: TGCAGGAGAAATAACAAGGCATTGAAGAATGGCAGA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGACAAGTCCTTCCCCTaGTCCGCCTTGATCCTTAAT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVDKSFP*SALILN
Trigger: ATTAAGGATCAAGGCGGAGCAGGGGAAGGACTTGTC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGTGCCCTGTGACCCATaGTCTCCAAAGGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFVPCDP*SPKAPS
Trigger: AGAGGGTGCCTTTGGAGAGCATGGGTCACAGGGCAC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAGAGACTTTGTCCTTTaGCTGTTTAAATACACTGGG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVRDFVL*LFKYTG
Trigger: CCCAGTGTATTTAAACAGGCAAAGGACAAAGTCTCT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACAGGAGTGCCTGGTGTaGGTGAAGAATAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVQECLV*VKNNLV
Trigger: CACCAAGTTATTCTTCACGCACACCAGGCACTCCTG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGCCCTGCTTAGCGAGTaGAGCAGTGACATCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFALLSE*SSDILS
Trigger: GCTGAGGATGTCACTGCTGCACTCGCTAAGCAGGGC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACTGGCAACAAGAGTGTaGCCAAACAAAGCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLATRV*PNKARG
Trigger: ACCCCTAGCTTTGTTTGGGCACACTCTTGTTGCCAG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGGAGGTCTGAATTATaGCTATTTCTTCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVWRSEL*LFLHLQ
Trigger: CTGCAGATGAAGAAATAGGCATAATTCAGACCTCCA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGTTCATAGTAATCACTaGCTGGCTCAATGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVVHSNH*LAQCFL
Trigger: CAAAAAGCATTGAGCCAGGCAGTGATTACTATGAAC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAACTCTGTGCGAGAGTaGTGTACCCTGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVNSVRE*CTLLLV
Trigger: CACAAGAAGCAGGGTACAGCACTCTCGCACAGAGTT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGGGGCTTTCTCCAGTaGAGGTGTGGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFRGFLQ*RCGGWK
Trigger: CTTCCAGCCACCACACCTGCACTGGAGAAAGCCCCT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGAACTTTATCATCAGTaGCTTCGTAAAAGGTACCAC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVELYHQ*LRKRYH
Trigger: GTGGTACCTTTTACGAAGGCACTGATGATAAAGTTC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAATGCATCTGCCTCCTaGGGTGCTTTGGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVNASAS*GALDEG
Trigger: CCCCTCATCCAAAGCACCGCAGGAGGCAGATGCATT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTCTACAGCCTCCTGGTaGACCAAGTCAGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSTASW*TKSGLA
Trigger: GGCCAAGCCTGACTTGGTGCACCAGGAGGCTGTAGA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAAGCACCTGTGTCTCTaGCTTTGCATCCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVKHLCL*LCIPWL
Trigger: AAGCCAAGGGATGCAAAGGCAGAGACACAGGTGCTT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATTCATCCTCCCTGTATaGGAATCCATTGGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVFILPV*ESIGAS
Trigger: CGAAGCGCCAATGGATTCCCATACAGGGAGGATGAA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGCCGAGGAGGGAGAATaGAGGAAGGTCTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFAEEGE*RKVLGE
Trigger: CTCTCCCAAGACCTTCCTCCATTCTCCCTCCTCGGC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAATGTTCTTCTACAACTaGAATGTGAGCATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVMFFYN*NVSIFG
Trigger: CCCAAAGATGCTCACATTCCAGTTGTAGAAGAACAT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGTATTGACAAATCTTTaGCCAAAGCTTGCTCATAGG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVVLTNL*PKLAHR
Trigger: CCTATGAGCAAGCTTTGGCCAAAGATTTGTCAATAC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGTATTGACAAATCTTTaGCCAAAGCTTGCTCATAGG +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVVLTNL*PKLAHR
Trigger: CCTATGAGCAAGCTTTGGCCAAAGATTTGTCAATAC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCCTCCTGCGGTGCTTTaGATGAGGGGGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFPPAVL*MRGSCP
Trigger: AGGACATGACCCCCTCATCCAAAGCACCGCAGGAGG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGCAAAACGCACGCTGTaGGACCCTGACTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFAKRTL*DPDSPS
Trigger: TGAAGGGGAGTCAGGGTCCCACAGCGTGCGTTTTGC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGGAAGCTGGAGCCTCTaGGGAACCATCTTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVGSWSL*GTIFGF
Trigger: GAACCCAAAGATGGTTCCCCAGAGGCTCCAGCTTCC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTTCTCCTGGCCTAAGTaGGCCTCTGCACTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFFSWPK*ASALCA
Trigger: AGCGCAGAGTGCAGAGGCCCACTTAGGCCAGGAGAA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGGTGGTCCGCCGTGCTaGAGAAGAGATAGAACTGTT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVGGPPC*RRDRTV
Trigger: AACAGTTCTATCTCTTCTTCAGCACGGCGGACCACC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAGTGCCTGGTGTGCGTaGAGAATAACTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSAWCA*RITWWG
Trigger: ACCCCACCAAGTTATTCTTCACGCACACCAGGCACT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGCCAAAGTGGCAAGCTaGGGAGATTCGAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFAKVAS*GDSSRL
Trigger: CAACCTGCTCGAATCTCCTCAGCTTGCCACTTTGGC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACATCTAAAGGAAGAGTaGAGCTTCCCCCTTGAAAGG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVHLKEE*SFPLER
Trigger: CCTTTCAAGGGGGAAGCTTCACTCTTCCTTTAGATG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCATCGGCAAATTGATTaGCATGCTTCTTTGTTCTAT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVHRQID*HASLFY
Trigger: ATAGAACAAAGAAGCATGTCAATCAATTTGCCGATG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTTCCTCCCTGGCACCTaGGACACCCAGGTCAGTTAT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFFLPGT*DTQVSY
Trigger: ATAACTGACCTGGGTGTCTCAGGTGCCAGGGAGGAA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTAACACAGGAGAGATaGGTTGGTCTAGTATATTTG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLTQER*VGLVYL
Trigger: CAAATATACTAGACCAACTCATCTCTCCTGTGTTAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTTCCTGCATCATTATaGGGTATCCAATTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVFPASL*GIQFLV
Trigger: AACCAGAAATTGGATACCTCATAATGATGCAGGAAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTATGTTATATATTGGCTaGTTATTCCACGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVMLYIG*LFHACC
Trigger: ACAGCAAGCGTGGAATAATCAGCCAATATATAACAT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAATGTTATATATTGGCTaGTTATTCCACGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVMLYIG*LFHACC
Trigger: ACAGCAAGCGTGGAATAATCAGCCAATATATAACAT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTCCTTACCAAGCCATaGATCTACTTTATCTCTAGT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVFLTKP*IYFISS
Trigger: ACTAGAGATAAAGTAGATTCATGGCTTGGTAAGGAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGTGCCCTGTGACCCATaGTCTCCAAAGGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSVPCDP*SPKAPS
Trigger: AGAGGGTGCCTTTGGAGAGCATGGGTCACAGGGCAC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACTCAGAGCCCACTCCTaGCAAGAGCTCATGCCTAAA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLRAHS*QELMPK
Trigger: TTTAGGCATGAGCTCTTGGCAGGAGTGGGCTCTGAG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGAGAGTGCTGTACCCTaGTTCTTGTGCTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVESAVP*FLCWRT
Trigger: AGTCCTCCAGCACAAGAAGCAGGGTACAGCACTCTC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCATCAGTTGTGGTTTaGACTACAGTGATGAAATCA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSSVVV*TTVMKS
Trigger: TGATTTCATCACTGTAGTGCAAACCACAACTGATGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATCATCAGTTGTGGTTTaGACTACAGTGATGAAATCA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVSSVVV*TTVMKS
Trigger: TGATTTCATCACTGTAGTGCAAACCACAACTGATGA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGAATTGGCTCTGACCTaGTGGTCCGCCGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSELALT*WSAVLK
Trigger: CTTCAGCACGGCGGACCACCAGGTCAGAGCCAATTC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACTTCAGGTCTGGCAGTaGTTGGTTAATAAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLQVWQ*LVNKPK
Trigger: CTTCGGCTTATTAACCAACCACTGCCAGACCTGAAG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCATTTGGATGTCACATaGCTTAGGTCTATTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVHLDVT*LRSIFL
Trigger: CAAGAAAATAGACCTAAGCCATGTGACATCCAAATG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACACGCTGGATCTGCCTaGGGACTGTGTAATGATCTC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVHAGSA*GLCNDL
Trigger: GAGATCATTACACAGTCCCCAGGCAGATCCAGCGTG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGCTTTTCTGGGCTCTTaGTTACTCCGTCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVAFLGS*LLRQRL
Trigger: AAGTCTCTGACGGAGTAACCAAGAGCCCAGAAAAGC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGACTCCTTTTCCTTCTaGTCTGAAGGCTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVDSFSF*SEGSAV
Trigger: TACAGCTGAGCCTTCAGACCAGAAGGAAAAGGAGTC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCAGGTTTAGCCTCATaGGGCTCTTCAATTTTAAAA +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSGLAS*GSSILK
Trigger: TTTTAAAATTGAAGAGCCCCATGAGGCTAAACCTGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATGCAGGTGTGGTGGCTaGAAGGTAATCATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVCRCGG*KVIIPF
Trigger: GAAGGGGATGATTACCTTCCAGCCACCACACCTGCA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCCACAAATTCCTCCCTaGCACCTGAGACACCCAGGT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFPQIPP*HLRHPG
Trigger: ACCTGGGTGTCTCAGGTGCCAGGGAGGAATTTGTGG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACTTTTCTTTCAGGAGTaGAAATTCTGCCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLFFQE*KFCLSR
Trigger: CCGGGAGAGGCAGAATTTCCACTCCTGAAAGAAAAG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAACAGGAGAGATGAGTTaGTCTAGTATATTTGATAGC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVTGEMS*SSIFDS
Trigger: GCTATCAAATATACTAGACCAACTCATCTCTCCTGT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCTTCCTGTTGCAAATaGAAATCAGGTCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSSCCK*KSGQFL
Trigger: CAGAAATTGACCTGATTTCCATTTGCAACAGGAAGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACCTTTCATGTATAACTaGACCCACCCCCACAAACTC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVPFMYN*THPHKL
Trigger: GAGTTTGTGGGGGTGGGTCCAGTTATACATGAAAGG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAGGGGATCTTTACTTTaGGTAAGAAAGACAAACATC +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVRGSLL*VRKTNI
Trigger: GATGTTTGTCTTTCTTACCCAAAGTAAAGATCCCCT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGAGGTATCCAATTTCTaGTTGCAAGTGACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVEVSNF*LQVTQR
Trigger: CCTCTGGGTCACTTGCAACCAGAAATTGGATACCTC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCCTGCAGAGAGTCTTaGCCTTCACCTACACACCCA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSCRES*PSPTHP
Trigger: TGGGTGTGTAGGTGAAGGCCAAGACTCTCTGCAGGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCTTCGGGAACTATTTaGGCCTCCGCACTAGACTCC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSSGTI*ASALDS
Trigger: GGAGTCTAGTGCGGAGGCCCAAATAGTTCCCGAAGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAGGGGTTTTTACTTCTaGAGACACCTCCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVRGFYF*RHLLDL
Trigger: GAGGTCAAGGAGGTGTCTCCAGAAGTAAAAACCCCT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000673860.1
3UTR CAA 72 bp CCACTGGGTCACCAAAAAGCACCTGTGTCTCTGCCTTaGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATA +
Preference number: 4 (lower is better)
Translates to: PLGHQKAPVSLP*HPLAFVLDVSI
Trigger: TATAGAAACATCCAAGACAAAAGCCAAGGGATGCAAAGGCAGAGACACAGGTGCTTTTTGGTGACCCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGGTGCTGAGGTCCAGTaGGGTGCCTTTGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSGAEVQ*GAFASS
Trigger: AGATGAAGCAAAGGCACCTCACTGGACCTCAGCACC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAATCTCAGGTGGATGTaGGTGTGCAGATGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVNLRWM*VCRCLC
Trigger: ACAGAGGCATCTGCACACTCACATCCACCTGAGATT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGTGCCTGGTGTGCGTaGAGAATAACTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSAWCA*RITWWG
Trigger: ACCCCACCAAGTTATTCTTCACGCACACCAGGCACT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGAGATTCGAGCAGGTTaGTGCTTCCAGACGAGGAGA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFEIRAG*CFQTRR
Trigger: TCTCCTCGTCTGGAAGCATCAACCTGCTCGAATCTC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCTTTTCCTTCTGGTCTaGAGGCTCAGCTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFLFLLV*RLSCRG
Trigger: CCCTCTACAGCTGAGCCTTCAGACCAGAAGGAAAAG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATTAGTTGTCTCTGGCTaGGAAACTAAGGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLVVSG*ETKAAC
Trigger: ACATGCTGCCTTAGTTTCTCAGCCAGAGACAACTAA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGTGAAGCTTCCCCCTTaGAAGGGACTTGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSVKLPP*KGLGMG
Trigger: TCCCATGCCAAGTCCCTTTCAAGGGGGAAGCTTCAC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATGCTGCACAGTCTCTTaGTTTATGGCCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVCCTVS*FMASFS
Trigger: AGAAAAGGAGGCCATAAATCAAGAGACTGTGCAGCA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATTTAGAGGTCATGGCTaGATCTGTAACTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVFRGHG*ICNCLL
Trigger: GAGCAAGCAGTTACAGATTCAGCCATGACCTCTAAA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAAATTCTCACTGTCTTaGACAGGTGATGGCAATGGG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVKFSLS*TGDGNG
Trigger: CCCATTGCCATCACCTGTTCAAGACAGTGAGAATTT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTCCTCCCTGGCACCTaGGACACCCAGGTCAGTTAT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFLPGT*DTQVSY
Trigger: ATAACTGACCTGGGTGTCTCAGGTGCCAGGGAGGAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAACAGGGTTACGGCTTTaGGTTGTTACAGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVTGLRL*VVTESN
Trigger: GTTGCTTTCTGTAACAACTCAAAGCCGTAACCCTGT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGAGGTGGTCCGTTCTaGGCTGAACAAAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFRGGPF*AEQRML
Trigger: GAGCATCCTTTGTTCAGCTCAGAACGGACCACCTCT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAACTAAGACCCTTCTCTaGTTTCTCAGAGGATGCATC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVTKTLL*FLRGCI
Trigger: GATGCATCCTCTGAGAAAGCAGAGAAGGGTCTTAGT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCTTTCCACCTCAGGCTaGTCTAGGGCTGCAAAACGC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLSTSG*SRAAKR
Trigger: GCGTTTTGCAGCCCTAGAGCAGCCTGAGGTGGAAAG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCCAAGATGGCAGACTTaGGGGTTCCTGGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSPRWQT*GFLVCE
Trigger: CTCACACACCAGGAACCCCCAAGTCTGCCATCTTGG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACATCCTCAGCCAAAGTaGCAAGCTGAGGAGATTCGA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVHPQPK*QAEEIR
Trigger: TCGAATCTCCTCAGCTTGCCACTTTGGCTGAGGATG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGAGGGCCAGGAGATATaGGGGCAACTAAACCCCACT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSEGQEI*GQLNPT
Trigger: AGTGGGGTTTAGTTGCCCCCATATCTCCTGGCCCTC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTTCCCTTCCCATTTTaGGATATCATCAAATACATC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVFPFPF*DIIKYI
Trigger: GATGTATTTGATGATATCCCAAAATGGGAAGGGAAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGAATGTGAGCATCTTTaGGTAAGGTCATTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVECEHL*VRSLPL
Trigger: CAGAGGCAATGACCTTACCCAAAGATGCTCACATTC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACTCTCCATACACTTTTaGATCAATAGTGAACATTCT +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLSIHF*INSEHS
Trigger: AGAATGTTCACTATTGATCCAAAAGTGTATGGAGAG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTTTGTAAAAATCTTTaGCTAGGAAAGGAGACTCAC +
Preference number: 4 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVFCKNL*LGKETH
Trigger: GTGAGTCTCCTTTCCTAGCCAAAGATTTTTACAAAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGGACTGATTTCCTCCTaGCAACCTCAGCATCTGCAC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFGLISS*QPQHLH
Trigger: GTGCAGATGCTGAGGTTGCCAGGAGGAAATCAGTCC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGATCGTTTCATGCAATaGCTCTGCAACATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVDRFMQ*LCNIRR
Trigger: CCTTCTGATGTTGCAGAGCCATTGCATGAAACGATC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCTGGGGAACCATCTTTaGGTTCTGCCTGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLGNHL*VLPGLQ
Trigger: CTGAAGCCCAGGCAGAACCCAAAGATGGTTCCCCAG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAACTCTTCACAGCTCTaGATTACTTACGTATTCTTA +
Preference number: 4 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVNSSQL*ITYVFL
Trigger: TAAGAATACGTAAGTAATCCAGAGCTGTGAAGAGTT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGCCCATCACGCTGCTaGAACTCAGCAGGTAAATCC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSPSRC*NSAGKS
Trigger: GGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTGGCAGGTTCATGGCTaGGGAACCTGTGTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSWQVHG*GTCVED
Trigger: GTCCTCTACACAGGTTCCCCAGCCATGAACCTGCCA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACTACAGCCTCAGCAGTaGCTACTTGAACTATCCTTG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLQPQQ*LLELSL
Trigger: CAAGGATAGTTCAAGTAGTCACTGCTGAGGCTGTAG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGGTGGTCCGCCGTGCTaGAGAAGAGATAGAACTGTT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSGGPPC*RRDRTV
Trigger: AACAGTTCTATCTCTTCTTCAGCACGGCGGACCACC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTTGGAGGAGTACGTATaGTGGCGACCTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFLEEYV*WRPSSH
Trigger: GTGAGAAGAAGGTCGCCATCATACGTACTCCTCCAA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAATCTTCCTCCACTGTaGCAGTCTGTTCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFNLPPL*QSVLRQ
Trigger: CTGCCTCAGAACAGACTGTCACAGTGGAGGAAGATT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360351.8
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGAAGGTCAGGTGCCATaGCAGTACCATTTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVEGQVP*QYHFCK
Trigger: TTTACAAAAATGGTACTGTCATGGCACCTGACCTTC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCCCAGGTCTTCGAGCTaGCTGTCCGTTTTTACAATG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFPRSSS*LSVFTM
Trigger: CATTGTAAAAACGGACAGTCAGCTCGAAGACCTGGG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGCTATCTCTGGCACTaGACTAAGACCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSYLWH*TKTLLC
Trigger: GCAGAGAAGGGTCTTAGTTCAGTGCCAGAGATAGCT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTCAAGGACTCCATGGTaGGACTTTCATGCTCACCAC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSRTPW*DFHAHH
Trigger: GTGGTGAGCATGAAAGTCTCACCATGGAGTCCTTGA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATATCTGAAGGGTGTCTaGGCGGAAGAGCAGTTTATC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVYLKGV*AEEQFI
Trigger: GATAAACTGCTCTTCCGCTCAGACACCCTTCAGATA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCTCCTATCATCATCTTaGGTGTCCACCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLLSSS*VSTQRL
Trigger: CAGCCTCTGGGTGGACACTCAAGATGATGATAGGAG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACCAGTGAGGTGCCTTTaGTTCATCTTTCCGTTCATC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVPVRCL*FIFPFI
Trigger: GATGAACGGAAAGATGAAGCAAAGGCACCTCACTGG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGACAAGTCCTTCCCCTaGTCCGCCTTGATCCTTAAT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFDKSFP*SALILN
Trigger: ATTAAGGATCAAGGCGGAGCAGGGGAAGGACTTGTC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAACACGGGCTTTAGCATaGTCTCTGAAGTTCAACTTT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVTRALA*SLKFNF
Trigger: AAAGTTGAACTTCAGAGAGCATGCTAAAGCCCGTGT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCTCAGAGCCCACTCCTaGCAAGAGCTCATGCCTAAA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLRAHS*QELMPK
Trigger: TTTAGGCATGAGCTCTTGGCAGGAGTGGGCTCTGAG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGCCTATTTCTTCATCTaGAGGTTTTGGGGGTTTACT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVAYFFI*RFWGFT
Trigger: AGTAAACCCCCAAAACCTGCAGATGAAGAAATAGGC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAGAGATATGCGCGGATaGTTCTTTGTCAACACTGAA +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVRDMRG*FFVNTE
Trigger: TTCAGTGTTGACAAAGAAGCATCCGCGCATATCTCT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAAGCACCTGTGTCTCTaGCTTTGCATCCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFKHLCL*LCIPWL
Trigger: AAGCCAAGGGATGCAAAGGCAGAGACACAGGTGCTT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGAAGAGCGCTTTTCTaGGCTCTTGGTTACTCCGTC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFRRALF*ALGYSV
Trigger: GACGGAGTAACCAAGAGCCCAGAAAAGCGCTCTTCT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAATGGAGGAAGGTCTTaGGAGAGAAGAGCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVNGGRS*ERRALF
Trigger: GAAAAGCGCTCTTCTCTCCCAAGACCTTCCTCCATT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGGTCTGGCAGTGGTTaGTTAATAAGCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFRSGSG*LISRSC
Trigger: GCAGCTTCGGCTTATTAACCAACCACTGCCAGACCT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACTTCAGGTCTGGCAGTaGTTGGTTAATAAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLQVWQ*LVNKPK
Trigger: CTTCGGCTTATTAACCAACCACTGCCAGACCTGAAG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCACGCTGGATCTGCCTaGGGACTGTGTAATGATCTC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSHAGSA*GLCNDL
Trigger: GAGATCATTACACAGTCCCCAGGCAGATCCAGCGTG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACCCTTGAAAGGGACTTaGCATGGGAGAATCAAACTG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVPLKGT*HGRIKL
Trigger: CAGTTTGATTCTCCCATGCCAAGTCCCTTTCAAGGG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTCTCCAGTGCAGGTGTaGTGGCTGGAAGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSPVQV*WLEGNH
Trigger: ATGATTACCTTCCAGCCACCACACCTGCACTGGAGA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGTGCCTTCTTTCATGTaGCCAGACTCAACACCCATA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVVPSFM*PDSTPI
Trigger: TATGGGTGTTGAGTCTGGCCACATGAAAGAAGGCAC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTGTCTACAGCCTCCTaGTGCACCAAGTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLSTAS*CTKSGL
Trigger: CAAGCCTGACTTGGTGCACCAGGAGGCTGTAGACAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTCATCATGAGGAGATaGTCTCCTTTCCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVFIMRR*SPFHLR
Trigger: CCTGAGGTGGAAAGGAGACCATCTCCTCATGATGAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGTATGGCAGTTACACTaGTTGCCATATCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVVWQLH*LPYPLG
Trigger: ACCCAGTGGATATGGCAACCAGTGTAACTGCCATAC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGTTCACTGGAGAAGTTaGCCTTTAAACTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVVHWRS*PLNSSQ
Trigger: CTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGAGGTATCCAATTTCTaGTTGCAAGTGACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVEVSNF*LQVTQR
Trigger: CCTCTGGGTCACTTGCAACCAGAAATTGGATACCTC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTAGCCCATCACGCTGCTaGAACTCAGCAGGTAAATCC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSSPSRC*NSAGKS
Trigger: GGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCCAGCCGTACCTAGCTaGTGTTACACAGGTGTCATA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFPAVPS*CYTGVI
Trigger: TATGACACCTGTGTAACACCAGCTAGGTACGGCTGG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTCTTCTTCTTTCTCCTaGCCTAAGTGGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSSSFS*PKWASA
Trigger: TGCAGAGGCCCACTTAGGCCAGGAGAAAGAAGAAGA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673860.1
3UTR CAA 72 bp TTGCAAGTGACCCAGAGGTTGAGTTCACTGGAGAAGTaGGCCTTTAAACTCTTCACAGCTCTGGATTACTTA +
Preference number: 4 (lower is better)
Translates to: LQVTQRLSSLEK*AFKLFTALDYL
Trigger: TAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAACTCAACCTCTGGGTCACTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CAA 72 bp TCTTTCCTGCATCATTATGAGGTATCCAATTTCTGGTaGCAAGTGACCCAGAGGTTGAGTTCACTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SFLHHYEVSNFW*QVTQRLSSLEK
Trigger: CTTCTCCAGTGAACTCAACCTCTGGGTCACTTGCAACCAGAAATTGGATACCTCATAATGATGCAGGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCTACAGCCTCAGCAGTaGCTACTTGAACTATCCTTG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFLQPQQ*LLELSL
Trigger: CAAGGATAGTTCAAGTAGTCACTGCTGAGGCTGTAG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTGGAGGAGTACGTATaGTGGCGACCTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLEEYV*WRPSSH
Trigger: GTGAGAAGAAGGTCGCCATCATACGTACTCCTCCAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCGGTTAGAGACAAGCTaGAGAATCAGCGCATATGCA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFRLETS*RISAYA
Trigger: TGCATATGCGCTGATTCTTCAGCTTGTCTCTAACCG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTGGTCTTTCTGTTCTaGGAAAGTGTGCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLVFLF*ESVLCG
Trigger: TCCACAGAGCACACTTTCTCAGAACAGAAAGACCAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTTAGAGGTCATGGCTaGATCTGTAACTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVFRGHG*ICNCLL
Trigger: GAGCAAGCAGTTACAGATTCAGCCATGACCTCTAAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCATATCAAGCTCAGCTaGTGTTGCAGCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSHIKLS*CCSSNS
Trigger: GGAGTTGGAGCTGCAACATCAGCTGAGCTTGATATG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAATTTTAACATCTAGTTaGCCCTGGACAGCAAAATCC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVILTSS*PWTAKS
Trigger: GGATTTTGCTGTCCAGGGTCAACTAGATGTTAAAAT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATTTCCACTGACAATTTaGCGGCAATCTCATCTTGAA +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVFPLTI*RQSHLE
Trigger: TTCAAGATGAGATTGCCGTCAAATTGTCAGTGGAAA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGCAAGGTATTTCCACTaGCAATTTGACGGCAATCTC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVARYFH*QFDGNL
Trigger: GAGATTGCCGTCAAATTGTCAGTGGAAATACCTTGC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCAACATCAGAAGGCGTaGTGGATATATCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFQHQKA*WIYLGS
Trigger: AGACCCCAGATATATCCATCACGCCTTCTGATGTTG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAACTCTTCTTCATCATaGGGAGATGGTCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVNSSSS*GDGLLS
Trigger: GGAAAGGAGACCATCTCCTCATGATGAAGAAGAGTT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAACAGGGTTACGGCTTTaGGTTGTTACAGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVTGLRL*VVTESN
Trigger: GTTGCTTTCTGTAACAACTCAAAGCCGTAACCCTGT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACCTTGTTATTTCTCCTaGAACTATTCAAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVPCYFS*NYSRKW
Trigger: CCACTTCCTTGAATAGTTGCAGGAGAAATAACAAGG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCCAGTGAGGTGCCTTTaGTTCATCTTTCCGTTCATC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFPVRCL*FIFPFI
Trigger: GATGAACGGAAAGATGAAGCAAAGGCACCTCACTGG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTGGTATTTGAATAGGTaGCCTGTGACCCATGCTCTC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFWYLNR*PVTHAL
Trigger: GAGAGCATGGGTCACAGGGCACCTATTCAAATACCA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTCACCTTTCAGGACTaGTACAGCCTCAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFTFQD*YSLSSD
Trigger: GTCACTGCTGAGGCTGTAGCAGTCCTGAAAGGTGAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCACCAGGCTTACTTTaGTTCTCTGACTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSPGLL*FSDSFS
Trigger: GGAAAAGGAGTCAGAGAAGCAAAGTAAGCCTGGTGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCTTCTTCCGTGCCTTaGATGTCCTTTTTATCAGGG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSSSVP*MSFLSG
Trigger: CCCTGATAAAAAGGACATGCAAGGCACGGAAGAAGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCTGGCAACAAGAGTGTaGCCAAACAAAGCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLATRV*PNKARG
Trigger: ACCCCTAGCTTTGTTTGGGCACACTCTTGTTGCCAG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTAACTCTGTGCGAGAGTaGTGTACCCTGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSNSVRE*CTLLLV
Trigger: CACAAGAAGCAGGGTACAGCACTCTCGCACAGAGTT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGAACTTTATCATCAGTaGCTTCGTAAAAGGTACCAC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVELYHQ*LRKRYH
Trigger: GTGGTACCTTTTACGAAGGCACTGATGATAAAGTTC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGACTCTTCCGGCTGCTaGCAGTTTCACTTCAATCAG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSDSSGC*QFHFNQ
Trigger: CTGATTGAAGTGAAACTGGCAGCAGCCGGAAGAGTC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTACCCATAAATGCATCTaGCTCCTGCGGTGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSTHKCI*LLRCFG
Trigger: TCCAAAGCACCGCAGGAGGCAGATGCATTTATGGGT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTCATGCAATGGCTCTaGAACATCAGAAGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVFMQWL*NIRRRD
Trigger: ATCACGCCTTCTGATGTTGCAGAGCCATTGCATGAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTGCCTGGGCTTCAGCTaGCTCTTCTACTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSCLGFS*LFYFKL
Trigger: GAGTTTGAAGTAGAAGAGGCAGCTGAAGCCCAGGCA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTAGAAGAGCGCTTTTCTaGGCTCTTGGTTACTCCGTC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSRRALF*ALGYSV
Trigger: GACGGAGTAACCAAGAGCCCAGAAAAGCGCTCTTCT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAATGGAGGAAGGTCTTaGGAGAGAAGAGCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFNGGRS*ERRALF
Trigger: GAAAAGCGCTCTTCTCTCCCAAGACCTTCCTCCATT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGTCGCAGGAGATTTTaGAGGAGTACGTATGATGGC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSRRRF*RSTYDG
Trigger: GCCATCATACGTACTCCTCCAAAATCTCCTGCGACT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCATCCTCAGCCAAAGTaGCAAGCTGAGGAGATTCGA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSHPQPK*QAEEIR
Trigger: TCGAATCTCCTCAGCTTGCCACTTTGGCTGAGGATG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGCTTTTCTGGGCTCTTaGTTACTCCGTCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFAFLGS*LLRQRL
Trigger: AAGTCTCTGACGGAGTAACCAAGAGCCCAGAAAAGC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCCCTTGAAAGGGACTTaGCATGGGAGAATCAAACTG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFPLKGT*HGRIKL
Trigger: CAGTTTGATTCTCCCATGCCAAGTCCCTTTCAAGGG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATTTCTTGAGGAGAACTaGGTTCTTCAGGTAAATCTG +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVFLEEN*VLQVNL
Trigger: CAGATTTACCTGAAGAACCCAGTTCTCCTCAAGAAA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTCTCCAGTGCAGGTGTaGTGGCTGGAAGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSSPVQV*WLEGNH
Trigger: ATGATTACCTTCCAGCCACCACACCTGCACTGGAGA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGTGCCTTCTTTCATGTaGCCAGACTCAACACCCATA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFVPSFM*PDSTPI
Trigger: TATGGGTGTTGAGTCTGGCCACATGAAAGAAGGCAC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGATCGTTTCATGCAATaGCTCTGCAACATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVDRFMQ*LCNIRR
Trigger: CCTTCTGATGTTGCAGAGCCATTGCATGAAACGATC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATTATCATATTCTCCCTaGGCTTCTATCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLSYSP*ASISSS
Trigger: GGAAGAAGAGATAGAAGCCCAGGGAGAATATGATAA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGTATGGCAGTTACACTaGTTGCCATATCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFVWQLH*LPYPLG
Trigger: ACCCAGTGGATATGGCAACCAGTGTAACTGCCATAC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGTGTGTGTGTGTGTGTaGAGAAGGTCACTACAATCA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVVCVCV*RRSLQS
Trigger: TGATTGTAGTGACCTTCTCCACACACACACACACAC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CAA 72 bp TGTGTCCCCACAAGAGTGGTGCTCAAAAAGCTTAATTaGAGTCGTTATCTTGAGAGTGAAGGCAAGATAGGT +
Preference number: 4 (lower is better)
Translates to: CVPTRVVLKKLN*SRYLESEGKIG
Trigger: ACCTATCTTGCCTTCACTCTCAAGATAACGACTCAAATTAAGCTTTTTGAGCACCACTCTTGTGGGGACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATTTGATGTTGTCTGTTaGTCCGATTTTGGATTTGAC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVFDVVC*SDFGFD
Trigger: GTCAAATCCAAAATCGGATCAACAGACAACATCAAA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGGAGTCAATTCCTGTTaGTCGTGGAACTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSGVNSC*SWNSIF
Trigger: GAAGATGGAGTTCCACGATCAACAGGAATTGACTCC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCCGTTGGCATTTCGATaGACCAGTCCTTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFPLAFR*TSPFVL
Trigger: AAGAACAAAAGGACTGGTTCATCGAAATGCCAACGG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTCTACAACTGGAATGTaGGCATCTTTGGGTAAGGTC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSTTGM*ASLGKV
Trigger: GACCTTACCCAAAGATGCTCACATTCCAGTTGTAGA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTTGGTCTTTCTGTTCTaGGAAAGTGTGCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFLVFLF*ESVLCG
Trigger: TCCACAGAGCACACTTTCTCAGAACAGAAAGACCAA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAAGACATCGGCAAATTaGTTGACATGCTTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVKTSAN*LTCFFV
Trigger: AACAAAGAAGCATGTCAATCAATTTGCCGATGTCTT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACATGATATCTCCGCTTaGGTACTTTCTTCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVHDISA*VLSSPV
Trigger: TACTGGAGAAGAAAGTACTCAAGCGGAGATATCATG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGGACTGTGTACTTATTaGACACACAGTAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSGLCTY*THSSPG
Trigger: ACCTGGGCTACTGTGTGTTCAATAAGTACACAGTCC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAAATTCTCACTGTCTTaGACAGGTGATGGCAATGGG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFKFSLS*TGDGNG
Trigger: CCCATTGCCATCACCTGTTCAAGACAGTGAGAATTT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTTCACTTCAATCAGTaGAAGGTCTGTGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVFHFNQ*KVCGQI
Trigger: GATTTGGCCACAGACCTTTCACTGATTGAAGTGAAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCAACATCAGAAGGCGTaGTGGATATATCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSQHQKA*WIYLGS
Trigger: AGACCCCAGATATATCCATCACGCCTTCTGATGTTG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATGGACTGACATACTCTaGTATAATTATCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVWTDIL*YNYPGP
Trigger: GGGACCTGGATAATTATATCAGAGTATGTCAGTCCA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAATGTTATATATTGGCTaGTTATTCCACGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVMLYIG*LFHACC
Trigger: ACAGCAAGCGTGGAATAATCAGCCAATATATAACAT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTGGTCCGTTCTGAGCTaGACAAAGGATGCTCATAGT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSWSVLS*TKDAHS
Trigger: ACTATGAGCATCCTTTGTTCAGCTCAGAACGGACCA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTGGTATTTGAATAGGTaGCCTGTGACCCATGCTCTC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSWYLNR*PVTHAL
Trigger: GAGAGCATGGGTCACAGGGCACCTATTCAAATACCA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTAATATTCACAAGCCCTaGTTAGCGAGTGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSNIHKP*LASAAV
Trigger: CACTGCTGCACTCGCTAAGCAGGGCTTGTGAATATT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCACTGACAATAGGATaGAGCCCTCACTTACGATTT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSLTIG*SPHLRF
Trigger: AAATCGTAAGTGAGGGCTGCATCCTATTGTCAGTGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360351.8
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAAGAATCAGCGCATATaGAGCAATACCACTCAAGTC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVKNQRI*SNTTQV
Trigger: GACTTGAGTGGTATTGCTGCATATGCGCTGATTCTT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGTAACAATTTGTACCTaGCCCCCTTTAGGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFVTICT*PPLGWY
Trigger: ATACCAGCCTAAAGGGGGGCAGGTACAAATTGTTAC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGCCTATTTCTTCATCTaGAGGTTTTGGGGGTTTACT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVAYFFI*RFWGFT
Trigger: AGTAAACCCCCAAAACCTGCAGATGAAGAAATAGGC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGAATCTGTAACTGCTTaGTCCAAACTTACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVESVTA*SKLTGN
Trigger: GTTCCCTGTAAGTTTGGAGCAAGCAGTTACAGATTC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACACTGCCTGGCTCAATaGTTTTTGTTGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVHCLAQ*FLLLLL
Trigger: AAGAAGAAGCAACAAAAAGCATTGAGCCAGGCAGTG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATTGTCACCATTTTTATaGATGGGAGACATGGTATCA +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLSPFL*MGDMVS
Trigger: TGATACCATGTCTCCCATGCATAAAAATGGTGACAA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCTGTTCTTCCTCTTTaGTTTCTACAGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSVLPL*FLQGSK
Trigger: CTTGCTTCCCTGTAGAAAGCAAAGAGGAAGAACAGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAGAGATATGCGCGGATaGTTCTTTGTCAACACTGAA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVRDMRG*FFVNTE
Trigger: TTCAGTGTTGACAAAGAAGCATCCGCGCATATCTCT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGATACGATCGTTTCATaGAATGGCTCTGCAACATCA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVDTIVS*NGSATS
Trigger: TGATGTTGCAGAGCCATTGCATGAAACGATCGTATC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTATGCTCTTCCCTTCCTaGAATCAGACTCCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFMLFPS*NQTPWF
Trigger: AAACCAAGGAGTCTGATTGCAGGAAGGGAAGAGCAT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATGTTACTTTACAGAGTaGAATGTTGGAGTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVCYFTE*NVGVLE
Trigger: TTCCAAGACTCCAACATTGCACTCTGTAAAGTAACA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACAGCCATTGAAGAAATaGCTTTCTATGGTAACAGGC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVQPLKK*LSMVTG
Trigger: GCCTGTTACCATAGAAAGGCATTTCTTCAATGGCTG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTGTATGGGAATCCATTaGCGCTTCGGACAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSCMGIH*RFGQVL
Trigger: AAGGACTTGTCCGAAGCGCCAATGGATTCCCATACA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGACATTCTTCAGGTCTaGCAGTGGTTGGTTAATAAG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVDILQV*QWLVNK
Trigger: CTTATTAACCAACCACTGCCAGACCTGAAGAATGTC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTCAGAGAGCCACATTTaGATGTCACATGGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSESHI*MSHGLG
Trigger: ACCTAAGCCATGTGACATCCAAATGTGGCTCTCTGA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGTCCTTTTGTTCTTTTaGAGTTGGAGGCTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVVLLFF*SWRLFR
Trigger: CCTAAAGAGCCTCCAACTCCAAAAGAACAAAAGGAC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGGGTTTACTCTCTTTTaGCACAGCTTCTTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVGFTLF*HSFFVR
Trigger: TCTGACAAAGAAGCTGTGCCAAAAGAGAGTAAACCC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAGAAAGTGTGCTCTGTaGAGGTCTGAATTATGCCTA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVRKCAL*RSELCL
Trigger: TAGGCATAATTCAGACCTCCACAGAGCACACTTTCT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGTATCAATAGACTCATaGACACTTTCTCTAGTGTCA +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVVSIDS*TLSLVS
Trigger: TGACACTAGAGAAAGTGTCCATGAGTCTATTGATAC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCCTTATTCTTACTGTaGAGGTCCCTTTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSLFLL*RSLFSP
Trigger: TGGAGAGAAAAGGGACCTCCACAGTAAGAATAAGGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACGTGATGGATATATCTaGGGTCTCTTTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVRDGYI*GLFAFF
Trigger: GAAGAAAGCAAAGAGACCCCAGATATATCCATCACG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAACTCTGAATCTCTGCTaGTTCAGATACGATCGTTTC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVTLNLC*FRYDRF
Trigger: GAAACGATCGTATCTGAACCAGCAGAGATTCAGAGT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTCCTTTGTGTTCACTTaGGCAGGTCTCCACAAATTC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSFVFT*AGLHKF
Trigger: GAATTTGTGGAGACCTGCCCAAGTGAACACAAAGGA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAACAGGAGAGATGAGTTaGTCTAGTATATTTGATAGC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVTGEMS*SSIFDS
Trigger: GCTATCAAATATACTAGACCAACTCATCTCTCCTGT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCTAGGGTTTCTTGTATaGCAGTTACACTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFLGFLV*QLHWLP
Trigger: TGGCAACCAGTGTAACTGCCATACAAGAAACCCTAG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGTTTCTCTCTTTTACTaGTACAAACGATCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVVSLFY*YKRSVP
Trigger: AGGAACTGATCGTTTGTACCAGTAAAAGAGAGAAAC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAAGCCAGAGAGAAACTaGCATAGTAGATCTAGAATT +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVKPERN*HSRSRI
Trigger: AATTCTAGATCTACTATGCCAGTTTCTCTCTGGCTT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAAATCCAGAGAGAGTTaGTTCCTAAATGAACGTGGC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVKSRES*FLNERG
Trigger: GCCACGTTCATTTAGGAACCAACTCTCTCTGGATTT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CAA 72 bp GTCCAATTGAACCCATGTAAAGCCAGTGTCTTCCTGTaGCAAATGGAAATCAGGTCAATTTCTGCATGTACT +
Preference number: 4 (lower is better)
Translates to: VQLNPCKASVFL*QMEIRSISACT
Trigger: AGTACATGCAGAAATTGACCTGATTTCCATTTGCAACAGGAAGACACTGGCTTTACATGGGTTCAATTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CAA 72 bp GCACTTCAAGGGAAGCTGATGAATAAATTGCCCAGATaGGTCAAATCAAACCTCACAGCAATTAATAGGCAG +
Preference number: 4 (lower is better)
Translates to: ALQGKLMNKLPR*VKSNLTAINRQ
Trigger: CTGCCTATTAATTGCTGTGAGGTTTGATTTGACCAATCTGGGCAATTTATTCATCAGCTTCCCTTGAAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTAGTTGTCTCTGGCTaGGAAACTAAGGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLVVSG*ETKAAC
Trigger: ACATGCTGCCTTAGTTTCTCAGCCAGAGACAACTAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCATGATATCTCCGCTTaGGTACTTTCTTCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFHDISA*VLSSPV
Trigger: TACTGGAGAAGAAAGTACTCAAGCGGAGATATCATG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGAAAGGAGACTCACATaGTATCTCCGCTTGAGTACT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSERRLT*YLRLST
Trigger: AGTACTCAAGCGGAGATATCATGTGAGTCTCCTTTC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTGCATCTGTTGGTATTaGCAAATCTTTGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFCICWY*QIFGQS
Trigger: GCTTTGGCCAAAGATTTGTCAATACCAACAGATGCA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTCTTCTTTTGGCCCCTaGATAAATTCCATCTGGACA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSSFGP*INSIWT
Trigger: TGTCCAGATGGAATTTATTCAGGGGCCAAAAGAAGA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTATGTTTCTCAAGAGATaGTCTCCGAGCTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFMFLKR*SPSFLF
Trigger: GAAAAGGAAGCTCGGAGATCATCTCTTGAGAAACAT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGGACACAAATCTAGCTaGTCAACTGACATTCTAATC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVGHKSS*STDILI
Trigger: GATTAGAATGTCAGTTGATCAGCTAGATTTGTGTCC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGTGAGAGGAACTAATTaGTTTGTGAGTTCTAGACTG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVVRGTN*FVSSRL
Trigger: CAGTCTAGAACTCACAAATCAATTAGTTCCTCTCAC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGTAACAATTTGTACCTaGCCCCCTTTAGGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSVTICT*PPLGWY
Trigger: ATACCAGCCTAAAGGGGGGCAGGTACAAATTGTTAC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTCACCAGGCTTACTTTaGTTCTCTGACTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSSPGLL*FSDSFS
Trigger: GGAAAAGGAGTCAGAGAAGCAAAGTAAGCCTGGTGA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATGGAGGTCTGAATTATaGCTATTTCTTCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVWRSEL*LFLHLQ
Trigger: CTGCAGATGAAGAAATAGGCATAATTCAGACCTCCA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGAATCTGTAACTGCTTaGTCCAAACTTACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFESVTA*SKLTGN
Trigger: GTTCCCTGTAAGTTTGGAGCAAGCAGTTACAGATTC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGTTCATAGTAATCACTaGCTGGCTCAATGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVVHSNH*LAQCFL
Trigger: CAAAAAGCATTGAGCCAGGCAGTGATTACTATGAAC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTTCAGGAAGGTCAGGTaGCATGACAGTACCATTTTT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFFRKVR*HDSTIF
Trigger: AAAAATGGTACTGTCATGGCACCTGACCTTCCTGAA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCCAATCTTGACCTTGTaGCTGCCAGATCTAGCATTT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSPILTL*LPDLAF
Trigger: AAATGCTAGATCTGGCAGGCACAAGGTCAAGATTGG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTTGACTCTTCCGGCTaGTGCCAGTTTCACTTCAAT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFDSSG*CQFHFN
Trigger: ATTGAAGTGAAACTGGCAGCAGCCGGAAGAGTCAAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTCATGCAATGGCTCTaGAACATCAGAAGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFMQWL*NIRRRD
Trigger: ATCACGCCTTCTGATGTTGCAGAGCCATTGCATGAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGATACGATCGTTTCATaGAATGGCTCTGCAACATCA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFDTIVS*NGSATS
Trigger: TGATGTTGCAGAGCCATTGCATGAAACGATCGTATC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCTCACTCTGAATCTCTaGTGGTTCAGATACGATCGT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLTLNL*WFRYDR
Trigger: ACGATCGTATCTGAACCAGCAGAGATTCAGAGTGAG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCAGCCATTGAAGAAATaGCTTTCTATGGTAACAGGC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFQPLKK*LSMVTG
Trigger: GCCTGTTACCATAGAAAGGCATTTCTTCAATGGCTG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGACATTCTTCAGGTCTaGCAGTGGTTGGTTAATAAG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFDILQV*QWLVNK
Trigger: CTTATTAACCAACCACTGCCAGACCTGAAGAATGTC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTCAGAGAGCCACATTTaGATGTCACATGGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSSESHI*MSHGLG
Trigger: ACCTAAGCCATGTGACATCCAAATGTGGCTCTCTGA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAGGTACTACAAGGCTTaGTTCTGTCTTCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVRYYKA*FCLLFH
Trigger: ATGAAACAGAAGACAGAACCAAGCCTTGTAGTACCT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGTCCTTTTGTTCTTTTaGAGTTGGAGGCTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFVLLFF*SWRLFR
Trigger: CCTAAAGAGCCTCCAACTCCAAAAGAACAAAAGGAC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATTTCCCTTCCCATTTTaGGATATCATCAAATACATC +
Preference number: 4 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVFPFPF*DIIKYI
Trigger: GATGTATTTGATGATATCCCAAAATGGGAAGGGAAA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGAAAGGGACTTGGCATaGGAGAATCAAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSERDLA*ENQTVS
Trigger: GGAAACAGTTTGATTCTCCCATGCCAAGTCCCTTTC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAATGTTCTTCTACAACTaGAATGTGAGCATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVMFFYN*NVSIFG
Trigger: CCCAAAGATGCTCACATTCCAGTTGTAGAAGAACAT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGAAAGTGTGCTCTGTaGAGGTCTGAATTATGCCTA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFRKCAL*RSELCL
Trigger: TAGGCATAATTCAGACCTCCACAGAGCACACTTTCT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTCTGTGGTAGGCTCTTaGTCTTTCTGTTCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSVVGS*SFCSEK
Trigger: TTTCTCAGAACAGAAAGACCAAGAGCCTACCACAGA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTCAGTGAAAGGTCTGTaGCCAAATCTCTTCGAACTT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSVKGL*PNLFEL
Trigger: AAGTTCGAAGAGATTTGGCCACAGACCTTTCACTGA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTACTCTGAATCTCTGCTaGTTCAGATACGATCGTTTC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFTLNLC*FRYDRF
Trigger: GAAACGATCGTATCTGAACCAGCAGAGATTCAGAGT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTATCATATTCTCCCTaGGCTTCTATCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLSYSP*ASISSS
Trigger: GGAAGAAGAGATAGAAGCCCAGGGAGAATATGATAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCCTTGGCTTTTGTCTTaGATGTTTCTATACTTCCCC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFPWLLS*MFLYFP
Trigger: GGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGTGTCCCCACAAGAGTaGTGCTCAAAAAGCTTAATT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFVSPQE*CSKSLI
Trigger: AATTAAGCTTTTTGAGCACCACTCTTGTGGGGACAC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTTGATGTTGTCTGTTaGTCCGATTTTGGATTTGAC +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVFDVVC*SDFGFD
Trigger: GTCAAATCCAAAATCGGATCAACAGACAACATCAAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACATCGGCAAATTGATTaGCATGCTTCTTTGTTCTAT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVHRQID*HASLFY
Trigger: ATAGAACAAAGAAGCATGTCAATCAATTTGCCGATG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGAAGGTCAGGTGCCATaGCAGTACCATTTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSEGQVP*QYHFCK
Trigger: TTTACAAAAATGGTACTGTCATGGCACCTGACCTTC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTACGGCAATCTCATCTTaGATTAGAGATGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFTAISS*IRDDSG
Trigger: TCCAGAATCATCTCTAATTCAAGATGAGATTGCCGT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTTTCCACTGACAATTTaGCGGCAATCTCATCTTGAA +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFFPLTI*RQSHLE
Trigger: TTCAAGATGAGATTGCCGTCAAATTGTCAGTGGAAA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTCCTTACCAAGCCATaGATCTACTTTATCTCTAGT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVFLTKP*IYFISS
Trigger: ACTAGAGATAAAGTAGATTCATGGCTTGGTAAGGAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTACTACAACCAGCCATTaGAGAAATGCCTTTCTATGG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSTTTSH*RNAFLW
Trigger: CCATAGAAAGGCATTTCTTCAATGGCTGGTTGTAGT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCCTTGTTATTTCTCCTaGAACTATTCAAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFPCYFS*NYSRKW
Trigger: CCACTTCCTTGAATAGTTGCAGGAGAAATAACAAGG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTAAGAATCAGCGCATATaGAGCAATACCACTCAAGTC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSKNQRI*SNTTQV
Trigger: GACTTGAGTGGTATTGCTGCATATGCGCTGATTCTT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCACTGCCTGGCTCAATaGTTTTTGTTGCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSHCLAQ*FLLLLL
Trigger: AAGAAGAAGCAACAAAAAGCATTGAGCCAGGCAGTG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTCTGTTCTTCCTCTTTaGTTTCTACAGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSSVLPL*FLQGSK
Trigger: CTTGCTTCCCTGTAGAAAGCAAAGAGGAAGAACAGA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTCAGGAAGGTCAGGTaGCATGACAGTACCATTTTT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFRKVR*HDSTIF
Trigger: AAAAATGGTACTGTCATGGCACCTGACCTTCCTGAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATGTTACTTTACAGAGTaGAATGTTGGAGTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVCYFTE*NVGVLE
Trigger: TTCCAAGACTCCAACATTGCACTCTGTAAAGTAACA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCAGCCATTGAAGAAATaGCTTTCTATGGTAACAGGC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSQPLKK*LSMVTG
Trigger: GCCTGTTACCATAGAAAGGCATTTCTTCAATGGCTG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGACATTCTTCAGGTCTaGCAGTGGTTGGTTAATAAG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSDILQV*QWLVNK
Trigger: CTTATTAACCAACCACTGCCAGACCTGAAGAATGTC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGGGTTTACTCTCTTTTaGCACAGCTTCTTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSGFTLF*HSFFVR
Trigger: TCTGACAAAGAAGCTGTGCCAAAAGAGAGTAAACCC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTCCTTATTCTTACTGTaGAGGTCCCTTTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSSLFLL*RSLFSP
Trigger: TGGAGAGAAAAGGGACCTCCACAGTAAGAATAAGGA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTAGCTTTCTTCTCTTaGTCAAACTCCTTACTCAGT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLAFFS*SNSLLS
Trigger: ACTGAGTAAGGAGTTTGACCAAGAGAAGAAAGCTAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTCCACCTTTTTGGATaGTTCTACCTCAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFHLFG*FYLSYL
Trigger: GAGATAGCTGAGGTAGAACCATCCAAAAAGGTGGAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCTTGTTCCACCTTTTTaGATGGTTCTACCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLVPPF*MVLPQL
Trigger: TAGCTGAGGTAGAACCATCCAAAAAGGTGGAACAAG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCTTCCTGTTGCAAATaGAAATCAGGTCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSSCCK*KSGQFL
Trigger: CAGAAATTGACCTGATTTCCATTTGCAACAGGAAGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTATTCAGGAACTGATTTaGCTCAAAGAGATCATACGC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFIQELI*LKEIIR
Trigger: GCGTATGATCTCTTTGAGCCAAATCAGTTCCTGAAT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCCTTGGCTTTTGTCTTaGATGTTTCTATACTTCCCC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSPWLLS*MFLYFP
Trigger: GGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAATAAATTGCCCAGATTaGTCAAATCAAACCTCACAG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVINCPD*SNQTSQ
Trigger: CTGTGAGGTTTGATTTGACCAATCTGGGCAATTTAT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGTTTCTCTCTTTTACTaGTACAAACGATCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVVSLFY*YKRSVP
Trigger: AGGAACTGATCGTTTGTACCAGTAAAAGAGAGAAAC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTAAATCCAGAGAGAGTTaGTTCCTAAATGAACGTGGC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSKSRES*FLNERG
Trigger: GCCACGTTCATTTAGGAACCAACTCTCTCTGGATTT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
3UTR CAA 72 bp TCCTCATCATTTCCTCCTTTATATTCAGGAACTGATTaGGCTCAAAGAGATCATACGCCTAGTGGACCATTT +
Preference number: 4 (lower is better)
Translates to: SSSFPPLYSGTD*AQRDHTPSGPF
Trigger: AAATGGTCCACTAGGCGTATGATCTCTTTGAGCCAAATCAGTTCCTGAATATAAAGGAGGAAATGATGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTTTGATGTTGTCTGTTaGTCCGATTTTGGATTTGAC +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFFDVVC*SDFGFD
Trigger: GTCAAATCCAAAATCGGATCAACAGACAACATCAAA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTACGGCAATCTCATCTTaGATTAGAGATGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSTAISS*IRDDSG
Trigger: TCCAGAATCATCTCTAATTCAAGATGAGATTGCCGT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTCTGCCATTCTTCAATaGCTTGTTATTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSSAILQ*LVISPA
Trigger: TGCAGGAGAAATAACAAGGCATTGAAGAATGGCAGA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTAGAGACTTTGTCCTTTaGCTGTTTAAATACACTGGG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSRDFVL*LFKYTG
Trigger: CCCAGTGTATTTAAACAGGCAAAGGACAAAGTCTCT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTTCTTGAGGAGAACTaGGTTCTTCAGGTAAATCTG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFLEEN*VLQVNL
Trigger: CAGATTTACCTGAAGAACCCAGTTCTCCTCAAGAAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACTCTCCATACACTTTTaGATCAATAGTGAACATTCT +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLSIHF*INSEHS
Trigger: AGAATGTTCACTATTGATCCAAAAGTGTATGGAGAG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTATAAATTGCCCAGATTaGTCAAATCAAACCTCACAG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFINCPD*SNQTSQ
Trigger: CTGTGAGGTTTGATTTGACCAATCTGGGCAATTTAT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGTTTCTCTCTTTTACTaGTACAAACGATCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFVSLFY*YKRSVP
Trigger: AGGAACTGATCGTTTGTACCAGTAAAAGAGAGAAAC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAACTCTTCACAGCTCTaGATTACTTACGTATTCTTA +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVNSSQL*ITYVFL
Trigger: TAAGAATACGTAAGTAATCCAGAGCTGTGAAGAGTT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATGGAATGTTATATATTaGCTGATTATTCCACGCTTG +
Preference number: 4 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVWNVIY*LIIPRL
Trigger: CAAGCGTGGAATAATCAGCCAATATATAACATTCCA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTAAGACATCGGCAAATTaGTTGACATGCTTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSKTSAN*LTCFFV
Trigger: AACAAAGAAGCATGTCAATCAATTTGCCGATGTCTT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR TCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTAACACAGGAGAGATaGGTTGGTCTAGTATATTTG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLTQER*VGLVYL
Trigger: CAAATATACTAGACCAACTCATCTCTCCTGTGTTAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR GCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTGTCACCATTTTTATaGATGGGAGACATGGTATCA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLSPFL*MGDMVS
Trigger: TGATACCATGTCTCCCATGCATAAAAATGGTGACAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCATTTGGATGTCACATaGCTTAGGTCTATTTTCTTG +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSHLDVT*LRSIFL
Trigger: CAAGAAAATAGACCTAAGCCATGTGACATCCAAATG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTCAGGTTTAGCCTCATaGGGCTCTTCAATTTTAAAA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSSGLAS*GSSILK
Trigger: TTTTAAAATTGAAGAGCCCCATGAGGCTAAACCTGA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGTATCAATAGACTCATaGACACTTTCTCTAGTGTCA +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSVSIDS*TLSLVS
Trigger: TGACACTAGAGAAAGTGTCCATGAGTCTATTGATAC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTAGCTTTCTTCTCTTaGTCAAACTCCTTACTCAGT +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLAFFS*SNSLLS
Trigger: ACTGAGTAAGGAGTTTGACCAAGAGAAGAAAGCTAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CCA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTGGAATGTTATATATTaGCTGATTATTCCACGCTTG +
Preference number: 4 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFWNVIY*LIIPRL
Trigger: CAAGCGTGGAATAATCAGCCAATATATAACATTCCA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CCA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTTTGTAAAAATCTTTaGCTAGGAAAGGAGACTCAC +
Preference number: 4 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFCKNL*LGKETH
Trigger: GTGAGTCTCCTTTCCTAGCCAAAGATTTTTACAAAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS CCA 90 bp GGGCTAGGAGTCCACGCCTCTCCCCGCTGGTGGCAGGTTCATGGCTaGGGAACCTGTGTAGAGGACCCACTTGATCCTCAGCCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: GLGVHASPRWWQVHG*GTCVEDPLDPQPLH
Trigger: ATGAAGGGGCTGAGGATCAAGTGGGTCCTCTACACAGGTTCCCCAGCCATGAACCTGCCACCAGCGGGGAGAGGCGTGGACTCCTAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS CCA 90 bp TGCAGAATCCTTCTCCGGGAGCATTATCCCCACAGGCTGGCTCTCTaGCTCTCTAGCTCCAGACAGACGCAGTCTGCAAGCCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: CRILLREHYPHRLAL*LSSSRQTQSASHQL
Trigger: GAGCTGGTGGCTTGCAGACTGCGTCTGTCTGGAGCTAGAGAGCCAGAGAGCCAGCCTGTGGGGATAATGCTCCCGGAGAAGGATTCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000361559.8
ENST00000445941.5
ENST00000673860.1
CDS CCA 90 bp CCTCATCGGAATTGTAAGGGTCATCATCAGGCACAGACACTGAGATaGAGGGGGCTAGGAGTCCACGCCTCTCCCCGCTGGTGGCAGGTT +
Preference number: 5 (lower is better)
Translates to: PHRNCKGHHQAQTLR*RGLGVHASPRWWQV
Trigger: AACCTGCCACCAGCGGGGAGAGGCGTGGACTCCTAGCCCCCTCCATCTCAGTGTCTGTGCCTGATGATGACCCTTACAATTCCGATGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS CCA 90 bp AGAACTGCTGCAGAATCCTTCTCCGGGAGCATTATCCCCACAGGCTaGCTCTCTGGCTCTCTAGCTCCAGACAGACGCAGTCTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: RTAAESFSGSIIPTG*LSGSLAPDRRSLQA
Trigger: GGCTTGCAGACTGCGTCTGTCTGGAGCTAGAGAGCCAGAGAGCCAGCCTGTGGGGATAATGCTCCCGGAGAAGGATTCTGCAGCAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000361559.8
ENST00000445941.5
ENST00000673860.1
CDS TCA 90 bp CGCACTAGACTCCATTTGGCCCTTACTGAGGCCCTTGGGTTGGTCTaGGGACTTAGCAGCCCCACACTCTTTCTCAGGAAGAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RTRLHLALTEALGLV*GLSSPTLFLRKSSR
Trigger: CCTGCTGCTCTTCCTGAGAAAGAGTGTGGGGCTGCTAAGTCCTCAGACCAACCCAAGGGCCTCAGTAAGGGCCAAATGGAGTCTAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445941.5
ENST00000481649.1
ENST00000673860.1
CDS CCA 90 bp CTCCTTTCCACCTCAGGCTGCTCTAGGGCTGCAAAACGCACGCTGTaGGACCCTGACTCCCCTTCATCAGTTGTGGTTTGCACTACAGTG +
Preference number: 5 (lower is better)
Translates to: LLSTSGCSRAAKRTL*DPDSPSSVVVCTTV
Trigger: CACTGTAGTGCAAACCACAACTGATGAAGGGGAGTCAGGGTCCCACAGCGTGCGTTTTGCAGCCCTAGAGCAGCCTGAGGTGGAAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 90 bp GCCTCCGCACTAGACTCCATTTGGCCCTTACTGAGGCCCTTGGGTTaGTCTGAGGACTTAGCAGCCCCACACTCTTTCTCAGGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: ASALDSIWPLLRPLG*SEDLAAPHSFSGRA
Trigger: TGCTCTTCCTGAGAAAGAGTGTGGGGCTGCTAAGTCCTCAGACCAACCCAAGGGCCTCAGTAAGGGCCAAATGGAGTCTAGTGCGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445941.5
ENST00000481649.1
ENST00000673860.1
CDS CCA 90 bp GCACTCTCTTCGGGAACTATTTGGGCCTCCGCACTAGACTCCATTTaGCCCTTACTGAGGCCCTTGGGTTGGTCTGAGGACTTAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ALSSGTIWASALDSI*PLLRPLGWSEDLAA
Trigger: GGCTGCTAAGTCCTCAGACCAACCCAAGGGCCTCAGTAAGGGCCAAATGGAGTCTAGTGCGGAGGCCCAAATAGTTCCCGAAGAGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445941.5
ENST00000481649.1
ENST00000673860.1
CDS TCA 90 bp GCCGAAGCTGCTTGGGAGTCGCAGGAGATTTTGGAGGAGTACGTATaGTGGCGACCTTCTTCTCACTCGGCACCAAGATGGCAGACTTGG +
Preference number: 5 (lower is better)
Translates to: AEAAWESQEILEEYV*WRPSSHSAPRWQTW
Trigger: CCAAGTCTGCCATCTTGGTGCCGAGTGAGAAGAAGGTCGCCATCATACGTACTCCTCCAAAATCTCCTGCGACTCCCAAGCAGCTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000471619.5
ENST00000473543.1
ENST00000475600.5
ENST00000478233.1
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCCAGACGAGGAGACATaGCTGAGTCGTCGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVPDEET*LSRRGD
Trigger: ATCACCCCGACGACTCAGCAATGTCTCCTCGTCTGG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS TCA 90 bp GGGAATCCATTGGCGCTTCGGACAAGTCCTTCCCCTGCTCCGCCTTaGTCCTTAATCTCAGGTGGATGTGAGTGTGCAGATGCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: GNPLALRTSPSPAPP*SLISGGCECADASV
Trigger: AACAGAGGCATCTGCACACTCACATCCACCTGAGATTAAGGATCAAGGCGGAGCAGGGGAAGGACTTGTCCGAAGCGCCAATGGATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392193.5
ENST00000392194.5
ENST00000445941.5
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 90 bp AATTCTCATCTCTGTCTCCTGACACACCTCGCCGAGGAGGGAGAATaGAGGAAGGTCTTGGGAGAGAAGAGCGCTTTTCTGGGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: NSHLCLLTHLAEEGE*RKVLGEKSAFLGSW
Trigger: CCAAGAGCCCAGAAAAGCGCTCTTCTCTCCCAAGACCTTCCTCCATTCTCCCTCCTCGGCGAGGTGTGTCAGGAGACAGAGATGAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000452717.1
ENST00000464007.1
ENST00000471619.5
ENST00000475600.5
ENST00000478233.1
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGGAGATTCGAGCAGGTaGATGCTTCCAGACGAGGAG +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVGDSSR*MLPDEE
Trigger: CTCCTCGTCTGGAAGCATCAACCTGCTCGAATCTCC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCTGGGGAACCATCTTaGGGTTCTGCCTGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSGEPS*GSAWAS
Trigger: TGAAGCCCAGGCAGAACCCAAAGATGGTTCCCCAGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS GCA 90 bp GCGCATATGCAGCAATACCACTCAAGTCTAGCCTTTGAGAACTGCTaGAGAATCCTTCTCCGGGAGCATTATCCCCACAGGCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: AHMQQYHSSLAFENC*RILLREHYPHRLAL
Trigger: GAGAGCCAGCCTGTGGGGATAATGCTCCCGGAGAAGGATTCTGCAGCAGTTCTCAAAGGCTAGACTTGAGTGGTATTGCTGCATATGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000361559.8
ENST00000445941.5
ENST00000673860.1
CDS CCA 90 bp TCACTCCTTTGTGTTCACTTGGGCAGGTCTCCACAAATTCCTCCCTaGCACCTGAGACACCCAGGTCAGTTATCTGAAGGGTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: SLLCVHLGRSPQIPP*HLRHPGQLSEGCLS
Trigger: GCTCAGACACCCTTCAGATAACTGACCTGGGTGTCTCAGGTGCCAGGGAGGAATTTGTGGAGACCTGCCCAAGTGAACACAAAGGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCTGTATGGGAATCCATaGGCGCTTCGGACAAGTCCT +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLYGNP*ALRTSP
Trigger: AGGACTTGTCCGAAGCGCCAATGGATTCCCATACAG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCAGGTCTGGCAGTGGTaGGTTAATAAGCCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVQVWQW*VNKPKL
Trigger: CAGCTTCGGCTTATTAACCAACCACTGCCAGACCTG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCTTTGGGTAAGGTCATaGCCTCTGAGGGTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVLWVRS*PLRVVL
Trigger: AAGCACCACCCTCAGAGGCAATGACCTTACCCAAAG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAACACTGAACTCATCTTaGACTCTTCCGGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVTLNSS*TLPAAA
Trigger: GGCAGCAGCCGGAAGAGTCAAAGATGAGTTCAGTGT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATGCACCAAGTCAGGCTaGGCCACCTTCTCTTTGACT +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVCTKSG*ATFSLT
Trigger: AGTCAAAGAGAAGGTGGCCAAGCCTGACTTGGTGCA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGCTCCTATCATCATCTaGAGTGTCCACCCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVAPIII*SVHPEA
Trigger: AGCCTCTGGGTGGACACTCAAGATGATGATAGGAGC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTGGCAGTTACACTGGTaGCCATATCCACTGGGTCAC +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVWQLHW*PYPLGH
Trigger: GTGACCCAGTGGATATGGCAACCAGTGTAACTGCCA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS GCA 90 bp TCAGCGCATATGCAGCAATACCACTCAAGTCTAGCCTTTGAGAACTaGTGCAGAATCCTTCTCCGGGAGCATTATCCCCACAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SAHMQQYHSSLAFEN*CRILLREHYPHRLA
Trigger: AGCCAGCCTGTGGGGATAATGCTCCCGGAGAAGGATTCTGCAGCAGTTCTCAAAGGCTAGACTTGAGTGGTATTGCTGCATATGCGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000361559.8
ENST00000445941.5
ENST00000673860.1
CDS GCA 90 bp TCTTTCATGTGGCCAGACTCAACACCCATAAATGCATCTGCCTCCTaGGGTGCTTTGGATGAGGGGGTCATGTCCTGTGTAGCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: SFMWPDSTPINASAS*GALDEGVMSCVASS
Trigger: ACTTGAGGCTACACAGGACATGACCCCCTCATCCAAAGCACCGCAGGAGGCAGATGCATTTATGGGTGTTGAGTCTGGCCACATGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 90 bp TGTCTTATATTCAGAAAGTGCAACCTCTTCTCTCTCAGGGGAAGCTaGAGCCTCTGGGGAACCATCTTTGGGTTCTGCCTGGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: CLIFRKCNLFSLRGS*SLWGTIFGFCLGFS
Trigger: GCTGAAGCCCAGGCAGAACCCAAAGATGGTTCCCCAGAGGCTCCAGCTTCCCCTGAGAGAGAAGAGGTTGCACTTTCTGAATATAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACTACTTGAACTATCCTaGCAGACACCTCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLLELS*QTPPLL
Trigger: CAGCAGAGGAGGTGTCTGCAAGGATAGTTCAAGTAG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAATAAGCCGAAGCTGCTaGGGAGTCGCAGGAGATTTT +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVISRSC*GVAGDF
Trigger: AAAATCTCCTGCGACTCCCAAGCAGCTTCGGCTTAT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGGTGCTTCTGCCATTTaGTCAGGTTTAGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVGASAI*SGLASW
Trigger: CCATGAGGCTAAACCTGACAAAATGGCAGAAGCACC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGCTGTACCCTGCTTCTaGTGCTGGAGGACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVAVPCF*CWRTGL
Trigger: CAGCCCAGTCCTCCAGCACAAGAAGCAGGGTACAGC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCACAGAAGCCAATCTaGACCTTGTGCCTGCCAGAT +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSQKPI*TLCLPD
Trigger: ATCTGGCAGGCACAAGGTCAAGATTGGCTTCTGTGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS TCA 90 bp GGATGTGAGTGTGCAGATGCCTCTGTTAGCGGTGCTGAGGTCCAGTaGGGTGCCTTTGCTTCATCTTTCCGTTCATCTGCCATTCTTCAA +
Preference number: 5 (lower is better)
Translates to: GCECADASVSGAEVQ*GAFASSFRSSAILQ
Trigger: TTGAAGAATGGCAGATGAACGGAAAGATGAAGCAAAGGCACCTCACTGGACCTCAGCACCGCTAACAGAGGCATCTGCACACTCACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392193.5
ENST00000392194.5
ENST00000445941.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 90 bp TCCACAAATTCCTCCCTGGCACCTGAGACACCCAGGTCAGTTATCTaGAGGGTGTCTGAGCGGAAGAGCAGTTTATCATATTCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: STNSSLAPETPRSVI*RVSERKSSLSYSPW
Trigger: CCAGGGAGAATATGATAAACTGCTCTTCCGCTCAGACACCCTTCAGATAACTGACCTGGGTGTCTCAGGTGCCAGGGAGGAATTTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 90 bp TGGTTGGTTAATAAGCCGAAGCTGCTTGGGAGTCGCAGGAGATTTTaGAGGAGTACGTATGATGGCGACCTTCTTCTCACTCGGCACCAA +
Preference number: 5 (lower is better)
Translates to: WLVNKPKLLGSRRRF*RSTYDGDLLLTRHQ
Trigger: TTGGTGCCGAGTGAGAAGAAGGTCGCCATCATACGTACTCCTCCAAAATCTCCTGCGACTCCCAAGCAGCTTCGGCTTATTAACCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000471619.5
ENST00000473543.1
ENST00000475600.5
ENST00000478233.1
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTCCAGTGAGGTGCCTTaGCTTCATCTTTCCGTTCAT +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVSSEVP*LHLSVH
Trigger: ATGAACGGAAAGATGAAGCAAAGGCACCTCACTGGA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTCAGAGAGCCACATTaGGATGTCACATGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVFREPH*DVTWLR
Trigger: CCTAAGCCATGTGACATCCAAATGTGGCTCTCTGAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACCAGACGAGGAGACATaGCTGAGTCGTCGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVPDEET*LSRRGD
Trigger: ATCACCCCGACGACTCAGCAATGTCTCCTCGTCTGG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGGGAGTCAATTCCTGTaGATCGTGGAACTCCATCTT +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVGSQFL*IVELHL
Trigger: AAGATGGAGTTCCACGATCAACAGGAATTGACTCCC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACCCACTCATCCTTTTTaGCTTCCGTTGGCATTTCGA +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVPTHPF*LPLAFR
Trigger: TCGAAATGCCAACGGAAGCAAAAAAGGATGAGTGGG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTGCGCGGATGCTTCTTaGTCAACACTGAACTCATCT +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVCADAS*STLNSS
Trigger: AGATGAGTTCAGTGTTGACAAAGAAGCATCCGCGCA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCCTTGTTCCACCTTTTaGGATGGTTCTACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVPCSTF*DGSTSA
Trigger: AGCTGAGGTAGAACCATCCAAAAAGGTGGAACAAGG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGCCTCCTGCGGTGCTTaGGATGAGGGGGTCATGTCC +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVASCGA*DEGVMS
Trigger: GGACATGACCCCCTCATCCAAAGCACCGCAGGAGGC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGGAGATGTTTCCTTCTaGCCCTCATCAGCTTTCAAG +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVGDVSF*PSSAFK
Trigger: CTTGAAAGCTGATGAGGGCAAGAAGGAAACATCTCC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGCCAGTGTCTTCCTGTaGCAAATGGAAATCAGGTCA +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVASVFL*QMEIRS
Trigger: TGACCTGATTTCCATTTGCAACAGGAAGACACTGGC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTCTATACTTCCCCGTaGCCTCAGTACATCCTCATC +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVFYTSP*PQYILI
Trigger: GATGAGGATGTACTGAGGCAACGGGGAAGTATAGAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTATTTGTAACAGTGTGTaGGAACCTCGGAATCCCAGC +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVICNSV*EPRNPS
Trigger: GCTGGGATTCCGAGGTTCCAACACACTGTTACAAAT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS TCA 90 bp ACACCTCCTCTGCTGTTTCTCTGTCAGCTGAGGTCAGCTCTCCGTTaGTCCCATTCTCTTTGGTATTTGAATAGGTGCCCTGTGACCCAT +
Preference number: 5 (lower is better)
Translates to: TPPLLFLCQLRSALR*SHSLWYLNRCPVTH
Trigger: ATGGGTCACAGGGCACCTATTCAAATACCAAAGAGAATGGGATCAACGGAGAGCTGACCTCAGCTGACAGAGAAACAGCAGAGGAGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392193.5
ENST00000392194.5
ENST00000445941.5
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 90 bp TTGACATTCTTCAGGTCTGGCAGTGGTTGGTTAATAAGCCGAAGCTaGTTGGGAGTCGCAGGAGATTTTGGAGGAGTACGTATGATGGCG +
Preference number: 5 (lower is better)
Translates to: LTFFRSGSGWLISRS*LGVAGDFGGVRMMA
Trigger: CGCCATCATACGTACTCCTCCAAAATCTCCTGCGACTCCCAAGCAGCTTCGGCTTATTAACCAACCACTGCCAGACCTGAAGAATGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000471619.5
ENST00000473543.1
ENST00000475600.5
ENST00000478233.1
ENST00000673860.1
ENST00000682079.1
CDS GCA 90 bp GGTTCTGTCTTCTGTTTCATGTCTTCCAGGCTGGCAACAAGAGTGTaGCCAAACAAAGCTAGGGGTGCTTTTTCTTCTTCCGTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: GSVFCFMSSRLATRV*PNKARGAFSSSVPC
Trigger: GCAAGGCACGGAAGAAGAAAAAGCACCCCTAGCTTTGTTTGGGCACACTCTTGTTGCCAGCCTGGAAGACATGAAACAGAAGACAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360351.8
ENST00000445941.5
ENST00000447185.5
ENST00000461253.1
ENST00000673860.1
ENST00000682079.1
CDS GCA 90 bp AACTGGGTTCTTCAGGTAAATCTGATGGATAACTCTGTGCGAGAGTaGTGTACCCTGCTTCTTGTGCTGGAGGACTGGGCTGGGATTCTT +
Preference number: 5 (lower is better)
Translates to: NWVLQVNLMDNSVRE*CTLLLVLEDWAGIL
Trigger: AAGAATCCCAGCCCAGTCCTCCAGCACAAGAAGCAGGGTACAGCACTCTCGCACAGAGTTATCCATCAGATTTACCTGAAGAACCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 90 bp TTCTTCCTCTTTGCTTTCTACAGGGAAGCAAGGGGCTTTCTCCAGTaGAGGTGTGGTGGCTGGAAGGTAATCATCCCCTTCATCCATACT +
Preference number: 5 (lower is better)
Translates to: FFLFAFYREARGFLQ*RCGGWKVIIPFIHT
Trigger: AGTATGGATGAAGGGGATGATTACCTTCCAGCCACCACACCTGCACTGGAGAAAGCCCCTTGCTTCCCTGTAGAAAGCAAAGAGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 90 bp AAACGCACGCTGTGGGACCCTGACTCCCCTTCATCAGTTGTGGTTTaGACTACAGTGATGAAATCATCCTCGATGGTCACAACAGACTCA +
Preference number: 5 (lower is better)
Translates to: KRTLWDPDSPSSVVV*TTVMKSSSMVTTDS
Trigger: TGAGTCTGTTGTGACCATCGAGGATGATTTCATCACTGTAGTGCAAACCACAACTGATGAAGGGGAGTCAGGGTCCCACAGCGTGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 90 bp TACGACTATCCTCAACCACAGTCTCTGATGGGACTGATTTCCTCCTaGCAACCTCAGCATCTGCACTCACAGAAGCCAATCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: YDYPQPQSLMGLISS*QPQHLHSQKPILTL
Trigger: CAAGGTCAAGATTGGCTTCTGTGAGTGCAGATGCTGAGGTTGCCAGGAGGAAATCAGTCCCATCAGAGACTGTGGTTGAGGATAGTCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCATTCTCTTTGGTATTaGAATAGGTGCCCTGTGACC +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVHSLWY*NRCPVT
Trigger: GGTCACAGGGCACCTATTCAAATACCAAAGAGAATG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACCTTTAGGCTGGTATTaGATGTTGTCTGTTGATCCG +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVPLGWY*MLSVDP
Trigger: CGGATCAACAGACAACATCAAATACCAGCCTAAAGG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCCTTTAGGCTGGTATTaGATGTTGTCTGTTGATCCG +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVPLGWY*MLSVDP
Trigger: CGGATCAACAGACAACATCAAATACCAGCCTAAAGG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTTTGGCTGTCAATCTaGACATTACCACCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVFWLSI*TLPPPG
Trigger: ACCTGGAGGTGGTAATGTCAAGATTGACAGCCAAAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGGAGATTCGAGCAGGTaGATGCTTCCAGACGAGGAG +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVGDSSR*MLPDEE
Trigger: CTCCTCGTCTGGAAGCATCAACCTGCTCGAATCTCC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTTTCTTCTTCCGTGCCTaGCATGTCCTTTTTATCAGG +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVFFFRA*HVLFIR
Trigger: CCTGATAAAAAGGACATGCAAGGCACGGAAGAAGAA...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAGTGAAGCTTCCCCCTaGAAAGGGACTTGGCATGGG +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVSEASP*KGTWHG
Trigger: CCCATGCCAAGTCCCTTTCAAGGGGGAAGCTTCACT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGGTGAAAGTATCCCTTaGCTGCACAGTCTCTTGATT +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVGESIP*LHSLLI
Trigger: AATCAAGAGACTGTGCAGCAAAGGGATACTTTCACC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAGCAAAATCCAGACCTaGTTCCACCTTTTTGGATGG +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVSKIQT*FHLFGW
Trigger: CCATCCAAAAAGGTGGAACAAGGTCTGGATTTTGCT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACCCTTGGCTTTTGTCTaGGATGTTTCTATACTTCCC +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVPLAFV*DVSILP
Trigger: GGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATTCCTGCAGAGAGTCTaGGCCTTCACCTACACACCC +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVFLQRV*AFTYTP
Trigger: GGGTGTGTAGGTGAAGGCCAAGACTCTCTGCAGGAA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACGCACTAGACTCCATTaGGCCCTTACTGAGGCCCTT +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVRTRLH*ALTEAL
Trigger: AAGGGCCTCAGTAAGGGCCAAATGGAGTCTAGTGCG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATCTGGAGACACCTCCTaGACCTCTTTTACACTTTTC +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVSGDTS*TSFTLF
Trigger: GAAAAGTGTAAAAGAGGTCAAGGAGGTGTCTCCAGA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS TCA 90 bp TCTTGTTCACCTTTCAGGACTGCTACAGCCTCAGCAGTGACTACTTaGACTATCCTTGCAGACACCTCCTCTGCTGTTTCTCTGTCAGCT +
Preference number: 5 (lower is better)
Translates to: SCSPFRTATASAVTT*TILADTSSAVSLSA
Trigger: AGCTGACAGAGAAACAGCAGAGGAGGTGTCTGCAAGGATAGTTCAAGTAGTCACTGCTGAGGCTGTAGCAGTCCTGAAAGGTGAACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000445941.5
ENST00000447185.5
ENST00000452717.1
ENST00000673860.1
ENST00000682079.1
CDS TCA 90 bp TCCTATCATCATCTTGAGTGTCCACCCAGAGGCTGTCAGCGTCCATaGTGGAGTCGTCAATGGTGGTCTCATCTTTGTAATCGTCATAGG +
Preference number: 5 (lower is better)
Translates to: SYHHLECPPRGCQRP*WSRQWWSHLCNRHR
Trigger: CCTATGACGATTACAAAGATGAGACCACCATTGACGACTCCATCATGGACGCTGACAGCCTCTGGGTGGACACTCAAGATGATGATAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 90 bp TCTTGTTCACCTTTCAGGACTGCTACAGCCTCAGCAGTGACTACTTaGACTATCCTTGCAGACACCTCCTCTCGTGGAACTGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SCSPFRTATASAVTT*TILADTSSRGTAFS
Trigger: AGAAAAGGCAGTTCCACGAGAGGAGGTGTCTGCAAGGATAGTTCAAGTAGTCACTGCTGAGGCTGTAGCAGTCCTGAAAGGTGAACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471619.5
ENST00000482864.5
CDS TCA 90 bp CTTCTTTCTCTTGTTCACCTTTCAGGACTGCTACAGCCTCAGCAGTaGCTACTTGAACTATCCTTGCAGACACCTCCTCTCGTGGAACTG +
Preference number: 5 (lower is better)
Translates to: LLSLVHLSGLLQPQQ*LLELSLQTPPLVEL
Trigger: CAGTTCCACGAGAGGAGGTGTCTGCAAGGATAGTTCAAGTAGTCACTGCTGAGGCTGTAGCAGTCCTGAAAGGTGAACAAGAGAAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471619.5
ENST00000482864.5
CDS CCA 90 bp AACTCTGTGCGAGAGTGCTGTACCCTGCTTCTTGTGCTGGAGGACTaGGCTGGGATTCTTTTCCTGTTTGAAACTCCTTGTCACCATTTT +
Preference number: 5 (lower is better)
Translates to: NSVRECCTLLLVLED*AGILFLFETPCHHF
Trigger: AAAATGGTGACAAGGAGTTTCAAACAGGAAAAGAATCCCAGCCCAGTCCTCCAGCACAAGAAGCAGGGTACAGCACTCTCGCACAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACTGTATGGGAATCCATaGGCGCTTCGGACAAGTCCT +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLYGNP*ALRTSP
Trigger: AGGACTTGTCCGAAGCGCCAATGGATTCCCATACAG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTGGCTGGTATTTGATGTaGTCTGTTGATCCGATTTTG +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVGWYLM*SVDPIL
Trigger: CAAAATCGGATCAACAGACAACATCAAATACCAGCC...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTACTCCGTCAGAGACTTaGTCCTTTGCCTGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVTPSET*SFACLN
Trigger: ATTTAAACAGGCAAAGGACAAAGTCTCTGACGGAGT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACGCTTTTCTGGGCTCTaGGTTACTCCGTCAGAGACT +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVRFSGL*VTPSET
Trigger: AGTCTCTGACGGAGTAACCAAGAGCCCAGAAAAGCG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACTTTGGGTAAGGTCATaGCCTCTGAGGGTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLWVRS*PLRVVL
Trigger: AAGCACCACCCTCAGAGGCAATGACCTTACCCAAAG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACTGGCTCAATGCTTTTaGTTGCTTCTTCTTTCAAGG +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLAQCF*LLLLSR
Trigger: CCTTGAAAGAAGAAGCAACAAAAAGCATTGAGCCAG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGCTGTACCCTGCTTCTaGTGCTGGAGGACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFAVPCF*CWRTGL
Trigger: CAGCCCAGTCCTCCAGCACAAGAAGCAGGGTACAGC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAGTGAACATTCTTTCTaGAGGAGAACTGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVSEHSF*RRTGFF
Trigger: GAAGAACCCAGTTCTCCTCAAGAAAGAATGTTCACT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAATACTTCCACTAGTGTaGGTTAGAATATCGGAAGCC +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVILPLV*VRISEA
Trigger: GGCTTCCGATATTCTAACCAACACTAGTGGAAGTAT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTATACTTCCACTAGTGTaGGTTAGAATATCGGAAGCC +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVILPLV*VRISEA
Trigger: GGCTTCCGATATTCTAACCAACACTAGTGGAAGTAT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGCCTCCTGCGGTGCTTaGGATGAGGGGGTCATGTCC +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSASCGA*DEGVMS
Trigger: GGACATGACCCCCTCATCCAAAGCACCGCAGGAGGC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAGTGAAATGAGCAGCTaGGATTTTAACAAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVSEMSS*DFNKAF
Trigger: GAAGGCCTTGTTAAAATCCAAGCTGCTCATTTCACT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTAACAGGGTTACGGCTTaGAGTTGTTACAGAAAGCAA +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVNRVTA*SCYRKQ
Trigger: TTGCTTTCTGTAACAACTCAAAGCCGTAACCCTGTT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCGCCTAGTGGACCATTaGATTTTAATGGTTCAGATC +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVRLVDH*ILMVQI
Trigger: GATCTGAACCATTAAAATCAAATGGTCCACTAGGCG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACCTGTGTCTCTGCCTTaGCATCCCTTGGCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVPVSLP*HPLAFV
Trigger: GACAAAAGCCAAGGGATGCAAAGGCAGAGACACAGG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS TCA 90 bp CTTCTTTCTCTTGTTCACCTTTCAGGACTGCTACAGCCTCAGCAGTaGCTACTTGAACTATCCTTGCAGACACCTCCTCTGCTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: LLSLVHLSGLLQPQQ*LLELSLQTPPLLFL
Trigger: GAGAAACAGCAGAGGAGGTGTCTGCAAGGATAGTTCAAGTAGTCACTGCTGAGGCTGTAGCAGTCCTGAAAGGTGAACAAGAGAAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000445941.5
ENST00000447185.5
ENST00000452717.1
ENST00000673860.1
ENST00000682079.1
CDS CCA 90 bp TTCCGTTGGCATTTCGATGAACCAGTCCTTTTGTTCTTTTGGAGTTaGAGGCTCTTTAGGGAGGTCAATGCCAGGTACTACAAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: FRWHFDEPVLLFFWS*RLFREVNARYYKAW
Trigger: CCAAGCCTTGTAGTACCTGGCATTGACCTCCCTAAAGAGCCTCCAACTCCAAAAGAACAAAAGGACTGGTTCATCGAAATGCCAACGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360351.8
ENST00000445941.5
ENST00000447185.5
ENST00000461253.1
ENST00000673860.1
ENST00000682079.1
CDS CCA 90 bp CTCACTCTGAATCTCTGCTGGTTCAGATACGATCGTTTCATGCAATaGCTCTGCAACATCAGAAGGCGTGATGGATATATCTGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LTLNLCWFRYDRFMQ*LCNIRRRDGYIWGL
Trigger: GAGACCCCAGATATATCCATCACGCCTTCTGATGTTGCAGAGCCATTGCATGAAACGATCGTATCTGAACCAGCAGAGATTCAGAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCGTGTTCTCAAAGGGTaGATAATATTTTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVRVLKG*IIFSGF
Trigger: GAAGCCAGAAAATATTATCAACCCTTTGAGAACACG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTCCCCTGCTCCGCCTaGATCCTTAATCTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVFPCSA*ILNLRW
Trigger: CCACCTGAGATTAAGGATCAAGGCGGAGCAGGGGAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGAGGTCAGCTCTCCGTaGATCCCATTCTCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVEVSSP*IPFSLV
Trigger: TACCAAAGAGAATGGGATCAACGGAGAGCTGACCTC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACTACTTGAACTATCCTaGCAGACACCTCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLLELS*QTPPLL
Trigger: CAGCAGAGGAGGTGTCTGCAAGGATAGTTCAAGTAG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAATAAGCCGAAGCTGCTaGGGAGTCGCAGGAGATTTT +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVISRSC*GVAGDF
Trigger: AAAATCTCCTGCGACTCCCAAGCAGCTTCGGCTTAT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGGAGATTCGAGCAGGTaGATGCTTCCAGACGAGGAG +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVGDSSR*MLPDEE
Trigger: CTCCTCGTCTGGAAGCATCAACCTGCTCGAATCTCC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAGTGAAGCTTCCCCCTaGAAAGGGACTTGGCATGGG +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSEASP*KGTWHG
Trigger: CCCATGCCAAGTCCCTTTCAAGGGGGAAGCTTCACT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATTTGGCACAGCTTCTTaGTCAGAAATGGTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVFGTAS*SEMVVF
Trigger: AAAAACCACCATTTCTGACAAAGAAGCTGTGCCAAA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGGATTCTTTTCCTGTTaGAAACTCCTTGTCACCATT +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVGFFSC*KLLVTI
Trigger: AATGGTGACAAGGAGTTTCAAACAGGAAAAGAATCC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTCAAGACATCGGCAAATaGATTGACATGCTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVQDIGK*IDMLLC
Trigger: ACAAAGAAGCATGTCAATCAATTTGCCGATGTCTTG...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTATGCATCTGTTGGTATaGACAAATCTTTGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVMHLLV*TNLWPK
Trigger: CTTTGGCCAAAGATTTGTCAATACCAACAGATGCAT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACAAGTTTTAGCTCTGTaGCCCTTCTATCATCTATGT +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVQVLAL*PFYHLC
Trigger: ACATAGATGATAGAAGGGCAACAGAGCTAAAACTTG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGACTCAATCACTCCTTaGTGTTCACTTGGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVDSITP*CSLGQV
Trigger: GACCTGCCCAAGTGAACACAAAGGAGTGATTGAGTC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCTGGGGAACCATCTTaGGGTTCTGCCTGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSGEPS*GSAWAS
Trigger: TGAAGCCCAGGCAGAACCCAAAGATGGTTCCCCAGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTATATTCAGGAACTGATTaGGCTCAAAGAGATCATACG +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVYSGTD*AQRDHT
Trigger: CGTATGATCTCTTTGAGCCAAATCAGTTCCTGAATA...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTCCTGCAGAGAGTCTaGGCCTTCACCTACACACCC +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVFLQRV*AFTYTP
Trigger: GGGTGTGTAGGTGAAGGCCAAGACTCTCTGCAGGAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATCCAGAGAGAGTTAACTACAACCAGCCATaGAAGAAATGCCTTTCTATG +
Preference number: 5 (lower is better)
Translates to: GMSAHHAAGTQQVNPERVNYNQP*KKCLSM
Trigger: CATAGAAAGGCATTTCTTCAATGGCTGGTTGTAGTT...AACTCTCTCTGGATTTACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACCCTTACTGAGGCCCTaGGGTTGGTCTGAGGACTTA +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVPLLRP*GWSEDL
Trigger: TAAGTCCTCAGACCAACCCAAGGGCCTCAGTAAGGG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS TCA 90 bp GTTTCTTCAGCTGCTAAAGGCAGAGCTGCAGTCTGGTCTTTATGTTaGGCTTCTTTCTCTTGTTCACCTTTCAGGACTGCTACAGCCTCA +
Preference number: 5 (lower is better)
Translates to: VSSAAKGRAAVWSLC*ASFSCSPFRTATAS
Trigger: TGAGGCTGTAGCAGTCCTGAAAGGTGAACAAGAGAAAGAAGCTCAACATAAAGACCAGACTGCAGCTCTGCCTTTAGCAGCTGAAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000445941.5
ENST00000447185.5
ENST00000452717.1
ENST00000471619.5
ENST00000482864.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 90 bp CCTGCTTCTTGTGCTGGAGGACTGGGCTGGGATTCTTTTCCTGTTTaGAACTCCTTGTCACCATTTTTATGCATGGGAGACATGGTATCA +
Preference number: 5 (lower is better)
Translates to: PASCAGGLGWDSFPV*NSLSPFLCMGDMVS
Trigger: TGATACCATGTCTCCCATGCATAAAAATGGTGACAAGGAGTTTCAAACAGGAAAAGAATCCCAGCCCAGTCCTCCAGCACAAGAAGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 90 bp TCTCACTGTCTTGAACAGGTGATGGCAATGGGACTGTGTACTTATTaGACACACAGTAGCCCAGGTCTTCGAGCTGACTGTCCGTTTTTA +
Preference number: 5 (lower is better)
Translates to: SHCLEQVMAMGLCTY*THSSPGLRADCPFL
Trigger: TAAAAACGGACAGTCAGCTCGAAGACCTGGGCTACTGTGTGTTCAATAAGTACACAGTCCCATTGCCATCACCTGTTCAAGACAGTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 90 bp CTCATCTTTGACTCTTCCGGCTGCTGCCAGTTTCACTTCAATCAGTaGAAGGTCTGTGGCCAAATCTCTTCGAACTTTATCATCAGTGCC +
Preference number: 5 (lower is better)
Translates to: LIFDSSGCCQFHFNQ*KVCGQISSNFIISA
Trigger: GGCACTGATGATAAAGTTCGAAGAGATTTGGCCACAGACCTTTCACTGATTGAAGTGAAACTGGCAGCAGCCGGAAGAGTCAAAGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 90 bp CTGAATCTCTGCTGGTTCAGATACGATCGTTTCATGCAATGGCTCTaGAACATCAGAAGGCGTGATGGATATATCTGGGGTCTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: LNLCWFRYDRFMQWL*NIRRRDGYIWGLFA
Trigger: AGCAAAGAGACCCCAGATATATCCATCACGCCTTCTGATGTTGCAGAGCCATTGCATGAAACGATCGTATCTGAACCAGCAGAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 90 bp GTACTACAAGGCTTGGTTCTGTCTTCTGTTTCATGTCTTCCAGGCTaGCAACAAGAGTGTGCCCAAACAAAGCTAGGGGTGCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: VLQGLVLSSVSCLPG*QQECAQTKLGVLFL
Trigger: AAGAAAAAGCACCCCTAGCTTTGTTTGGGCACACTCTTGTTGCCAGCCTGGAAGACATGAAACAGAAGACAGAACCAAGCCTTGTAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360351.8
ENST00000445941.5
ENST00000447185.5
ENST00000461253.1
ENST00000673860.1
ENST00000682079.1
CDS CCA 90 bp CTCTTCCGGCTGCTGCCAGTTTCACTTCAATCAGTGAAAGGTCTGTaGCCAAATCTCTTCGAACTTTATCATCAGTGCCTTCGTAAAAGG +
Preference number: 5 (lower is better)
Translates to: LFRLLPVSLQSVKGL*PNLFELYHQCLRKR
Trigger: CCTTTTACGAAGGCACTGATGATAAAGTTCGAAGAGATTTGGCCACAGACCTTTCACTGATTGAAGTGAAACTGGCAGCAGCCGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 90 bp TTCTCTTTGACTTCTGTCTCACTAACTTTAGTGCCTTCTTTCATGTaGCCAGACTCAACACCCATAAATGCATCTGCCTCCTGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: FSLTSVSLTLVPSFM*PDSTPINASASCGA
Trigger: AGCACCGCAGGAGGCAGATGCATTTATGGGTGTTGAGTCTGGCCACATGAAAGAAGGCACTAAAGTTAGTGAGACAGAAGTCAAAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACAGGTCTGGCAGTGGTaGGTTAATAAGCCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVQVWQW*VNKPKL
Trigger: CAGCTTCGGCTTATTAACCAACCACTGCCAGACCTG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTATTCAGAGAGCCACATTaGGATGTCACATGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVFREPH*DVTWLR
Trigger: CCTAAGCCATGTGACATCCAAATGTGGCTCTCTGAA...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCCAGACGAGGAGACATaGCTGAGTCGTCGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSPDEET*LSRRGD
Trigger: ATCACCCCGACGACTCAGCAATGTCTCCTCGTCTGG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACGCTTTTCTGGGCTCTaGGTTACTCCGTCAGAGACT +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVRFSGL*VTPSET
Trigger: AGTCTCTGACGGAGTAACCAAGAGCCCAGAAAAGCG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTACTTAGGTCTATTTTCTaGGTAACAATTTGTACCTGC +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVLRSIF*VTICTC
Trigger: GCAGGTACAAATTGTTACCAAGAAAATAGACCTAAG...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAGTTTCCCTTCCCATTTaGGGATATCATCAAATACAT +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVVSLPI*GYHQIH
Trigger: ATGTATTTGATGATATCCCAAAATGGGAAGGGAAAC...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAACACTGAACTCATCTTaGACTCTTCCGGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVTLNSS*TLPAAA
Trigger: GGCAGCAGCCGGAAGAGTCAAAGATGAGTTCAGTGT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAATGAGTGGTGTGGGTTaGCTCCTAGGGTTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVMSGVG*LLGFLV
Trigger: TACAAGAAACCCTAGGAGCAAACCCACACCACTCAT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCATACTTGTAGGTGGGATGTCAGCCCATCACGCTGCTGGAACTCAGCAGGTAAATAAATTGCCCAGATaGGTCAAATCAAACCTCACA +
Preference number: 5 (lower is better)
Translates to: VILVGGMSAHHAAGTQQVNKLPR*VKSNLT
Trigger: TGTGAGGTTTGATTTGACCAATCTGGGCAATTTATT...TACCTGCTGAGTTCCAGCAGCGTGATGGGCTGACATCCCACCTACAAGTATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS GCA 90 bp ATTTCAATGCTAAATGAGAAATATTCACAAGCCCTGCTTAGCGAGTaGAGCAGTGACATCCTCAGCCAAAGTGGCAAGCTGAGGAGATTC +
Preference number: 5 (lower is better)
Translates to: ISMLNEKYSQALLSE*SSDILSQSGKLRRF
Trigger: GAATCTCCTCAGCTTGCCACTTTGGCTGAGGATGTCACTGCTGCACTCGCTAAGCAGGGCTTGTGAATATTTCTCATTTAGCATTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 90 bp ATATTCTCCCTGGGCTTCTATCTCTTCTTCCTCACTCTGAATCTCTaGTGGTTCAGATACGATCGTTTCATGCAATGGCTCTGCAACATC +
Preference number: 5 (lower is better)
Translates to: IFSLGFYLFFLTLNL*WFRYDRFMQWLCNI
Trigger: GATGTTGCAGAGCCATTGCATGAAACGATCGTATCTGAACCAGCAGAGATTCAGAGTGAGGAAGAAGAGATAGAAGCCCAGGGAGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 90 bp TTACTCCGTCCTTGTTCCCTGATTTTGAGTATGGCAAACGGTCTGTaGAGCCTGCTGAGGTGGGCTGTATTAATAAACTGTCAGAAAATG +
Preference number: 5 (lower is better)
Translates to: LLRPCSLILSMANGL*SLLRWAVLINCQKM
Trigger: CATTTTCTGACAGTTTATTAATACAGCCCACCTCAGCAGGCTCCACAGACCGTTTGCCATACTCAAAATCAGGGAACAAGGACGGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199940.10
ENST00000452717.1
CDS CCA 90 bp AGAGACAAGCTGAAGAATGATTTAGCGGTTTGCCATAGGGGCTTCTaGTACCAAATGCCTGACAGGCATTTTAATTGCCTCCATCCAAGT +
Preference number: 5 (lower is better)
Translates to: RDKLKNDLAVCHRGF*YQMPDRHFNCLHPS
Trigger: ACTTGGATGGAGGCAATTAAAATGCCTGTCAGGCATTTGGTACCAGAAGCCCCTATGGCAAACCGCTAAATCATTCTTCAGCTTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392193.5
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTCCCCTGCTCCGCCTaGATCCTTAATCTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFPCSA*ILNLRW
Trigger: CCACCTGAGATTAAGGATCAAGGCGGAGCAGGGGAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCTGTATGGGAATCCATaGGCGCTTCGGACAAGTCCT +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFLYGNP*ALRTSP
Trigger: AGGACTTGTCCGAAGCGCCAATGGATTCCCATACAG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAATAAGCCGAAGCTGCTaGGGAGTCGCAGGAGATTTT +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVISRSC*GVAGDF
Trigger: AAAATCTCCTGCGACTCCCAAGCAGCTTCGGCTTAT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCAGGTCTGGCAGTGGTaGGTTAATAAGCCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFQVWQW*VNKPKL
Trigger: CAGCTTCGGCTTATTAACCAACCACTGCCAGACCTG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACAGGTACTACAAGGCTaGGTTCTGTCTTCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVQVLQG*VLSSVS
Trigger: TGAAACAGAAGACAGAACCAAGCCTTGTAGTACCTG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGGTGCTTCTGCCATTTaGTCAGGTTTAGCCTCATGG +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVGASAI*SGLASW
Trigger: CCATGAGGCTAAACCTGACAAAATGGCAGAAGCACC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAAGCCAATCTTGACCTaGTGCCTGCCAGATCTAGCA +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVKPILT*CLPDLA
Trigger: TGCTAGATCTGGCAGGCACAAGGTCAAGATTGGCTT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATCACAGAAGCCAATCTaGACCTTGTGCCTGCCAGAT +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSQKPI*TLCLPD
Trigger: ATCTGGCAGGCACAAGGTCAAGATTGGCTTCTGTGA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTGCACCAAGTCAGGCTaGGCCACCTTCTCTTTGACT +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFCTKSG*ATFSLT
Trigger: AGTCAAAGAGAAGGTGGCCAAGCCTGACTTGGTGCA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCCTGTGTCTCTGCCTTaGCATCCCTTGGCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFPVSLP*HPLAFV
Trigger: GACAAAAGCCAAGGGATGCAAAGGCAGAGACACAGG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCTCTTCGGGAACTATTaGGGCCTCCGCACTAGACTC +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLFGNY*GLRTRL
Trigger: GAGTCTAGTGCGGAGGCCCAAATAGTTCCCGAAGAG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS TCA 90 bp ACCTTGTGCCTGCCAGATCTAGCATTTCAGGAAGGTCAGGTGCCATaGCAGTACCATTTTTGTAAAAATCTTTGGCTAGGAAAGGAGACT +
Preference number: 5 (lower is better)
Translates to: TLCLPDLAFQEGQVP*QYHFCKNLWLGKET
Trigger: AGTCTCCTTTCCTAGCCAAAGATTTTTACAAAAATGGTACTGTCATGGCACCTGACCTTCCTGAAATGCTAGATCTGGCAGGCACAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 90 bp GCTTTCTCCAGTGTTTTAGAGGTCATGGCTGAATCTGTAACTGCTTaGTCCAAACTTACAGGGAACGAGTCCTGTTTCAACATATCTGTG +
Preference number: 5 (lower is better)
Translates to: AFSSVLEVMAESVTA*SKLTGNESCFNISV
Trigger: CACAGATATGTTGAAACAGGACTCGTTCCCTGTAAGTTTGGAGCAAGCAGTTACAGATTCAGCCATGACCTCTAAAACACTGGAGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGAGGTCAGCTCTCCGTaGATCCCATTCTCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFEVSSP*IPFSLV
Trigger: TACCAAAGAGAATGGGATCAACGGAGAGCTGACCTC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGGGAGTCAATTCCTGTaGATCGTGGAACTCCATCTT +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVGSQFL*IVELHL
Trigger: AAGATGGAGTTCCACGATCAACAGGAATTGACTCCC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACCCACTCATCCTTTTTaGCTTCCGTTGGCATTTCGA +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVPTHPF*LPLAFR
Trigger: TCGAAATGCCAACGGAAGCAAAAAAGGATGAGTGGG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGGAGATGTTTCCTTCTaGCCCTCATCAGCTTTCAAG +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVGDVSF*PSSAFK
Trigger: CTTGAAAGCTGATGAGGGCAAGAAGGAAACATCTCC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACTCCTTTGTGTTCACTaGGGCAGGTCTCCACAAATT +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLLCVH*GRSPQI
Trigger: AATTTGTGGAGACCTGCCCAAGTGAACACAAAGGAG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAACAGGGTTACGGCTTaGAGTTGTTACAGAAAGCAA +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVNRVTA*SCYRKQ
Trigger: TTGCTTTCTGTAACAACTCAAAGCCGTAACCCTGTT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACTGCCTTTGCATCCCTaGGCTTTTGTCTTGGATGTT +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLPLHP*AFVLDV
Trigger: AACATCCAAGACAAAAGCCAAGGGATGCAAAGGCAG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAGTTCACTGGAGAAGTaGGCCTTTAAACTCTTCACA +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVSSLEK*AFKLFT
Trigger: TGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAACT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGTATCCAATTTCTGGTaGCAAGTGACCCAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVVSNFW*QVTQRL
Trigger: CAACCTCTGGGTCACTTGCAACCAGAAATTGGATAC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACTGATTATTCCACGCTaGCTGTATTACTGTAGGTGT +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVLIIPR*LYYCRC
Trigger: ACACCTACAGTAATACAGCAAGCGTGGAATAATCAG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAATTTGTAACAGTGTGTaGGAACCTCGGAATCCCAGC +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVICNSV*EPRNPS
Trigger: GCTGGGATTCCGAGGTTCCAACACACTGTTACAAAT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS TCA 90 bp ATTTCATTCTTCATGACATCTAAAGGAAGAGTGAAGCTTCCCCCTTaGAAGGGACTTGGCATGGGAGAATCAAACTGTTTCCCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: ISFFMTSKGRVKLPP*KGLGMGESNCFPSH
Trigger: ATGGGAAGGGAAACAGTTTGATTCTCCCATGCCAAGTCCCTTTCAAGGGGGAAGCTTCACTCTTCCTTTAGATGTCATGAAGAATGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360351.8
ENST00000445941.5
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 90 bp GTCCTGTTTCAACATATCTGTGGTAGGCTCTTGGTCTTTCTGTTCTaGGAAAGTGTGCTCTGTGGAGGTCTGAATTATGCCTATTTCTTC +
Preference number: 5 (lower is better)
Translates to: VLFQHICGRLLVFLF*ESVLCGGLNYAYFF
Trigger: GAAGAAATAGGCATAATTCAGACCTCCACAGAGCACACTTTCTCAGAACAGAAAGACCAAGAGCCTACCACAGATATGTTGAAACAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 90 bp CCTATCATTAGCTTTCTTCTCTTGGTCAAACTCCTTACTCAGTCCTaGTTTGTCACCAGAGATATGCGCGGATGCTTCTTTGTCAACACT +
Preference number: 5 (lower is better)
Translates to: PIISFLLLVKLLTQS*FVTRDMRGCFFVNT
Trigger: AGTGTTGACAAAGAAGCATCCGCGCATATCTCTGGTGACAAATCAGGACTGAGTAAGGAGTTTGACCAAGAGAAGAAAGCTAATGATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 90 bp AGTTTATCATATTCTCCCTGGGCTTCTATCTCTTCTTCCTCACTCTaGATCTCTGCTGGTTCAGATACGATCGTTTCATGCAATGGCTCT +
Preference number: 5 (lower is better)
Translates to: SLSYSPWASISSSSL*ISAGSDTIVSCNGS
Trigger: AGAGCCATTGCATGAAACGATCGTATCTGAACCAGCAGAGATTCAGAGTGAGGAAGAAGAGATAGAAGCCCAGGGAGAATATGATAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 90 bp TCAGTGAAAGGTCTGTGGCCAAATCTCTTCGAACTTTATCATCAGTaGCTTCGTAAAAGGTACCACTCTCCCCTGATAAATTCTCACTGT +
Preference number: 5 (lower is better)
Translates to: SVKGLWPNLFELYHQ*LRKRYHSPLINSHC
Trigger: ACAGTGAGAATTTATCAGGGGAGAGTGGTACCTTTTACGAAGGCACTGATGATAAAGTTCGAAGAGATTTGGCCACAGACCTTTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 90 bp TCTTGGTCAAACTCCTTACTCAGTCCTGATTTGTCACCAGAGATATaGGCGGATGCTTCTTTGTCAACACTGAACTCATCTTTGACTCTT +
Preference number: 5 (lower is better)
Translates to: SWSNSLLSPDLSPEI*ADASLSTLNSSLTL
Trigger: AAGAGTCAAAGATGAGTTCAGTGTTGACAAAGAAGCATCCGCGCATATCTCTGGTGACAAATCAGGACTGAGTAAGGAGTTTGACCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCTACTTGAACTATCCTaGCAGACACCTCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLLELS*QTPPLL
Trigger: CAGCAGAGGAGGTGTCTGCAAGGATAGTTCAAGTAG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGATGAACCAGTCCTTTaGTTCTTTTGGAGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVDEPVL*FFWSWR
Trigger: CCTCCAACTCCAAAAGAACAAAAGGACTGGTTCATC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTGCTGCACAGTCTCTaGATTTATGGCCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLLHSL*IYGLLF
Trigger: GAAAAGGAGGCCATAAATCAAGAGACTGTGCAGCAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAATGCATCTGTTGGTATaGACAAATCTTTGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVMHLLV*TNLWPK
Trigger: CTTTGGCCAAAGATTTGTCAATACCAACAGATGCAT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAGCAAAATCCAGACCTaGTTCCACCTTTTTGGATGG +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVSKIQT*FHLFGW
Trigger: CCATCCAAAAAGGTGGAACAAGGTCTGGATTTTGCT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTACAAGTTTTAGCTCTGTaGCCCTTCTATCATCTATGT +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVQVLAL*PFYHLC
Trigger: ACATAGATGATAGAAGGGCAACAGAGCTAAAACTTG...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCTCCTTTGTGTTCACTaGGGCAGGTCTCCACAAATT +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFLLCVH*GRSPQI
Trigger: AATTTGTGGAGACCTGCCCAAGTGAACACAAAGGAG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGACTCAATCACTCCTTaGTGTTCACTTGGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSDSITP*CSLGQV
Trigger: GACCTGCCCAAGTGAACACAAAGGAGTGATTGAGTC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCATCACGGGAGAGACTaGTATCTGGCACTAAAACAG +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFHHGRD*YLALKQ
Trigger: CTGTTTTAGTGCCAGATACAAGTCTCTCCCGTGATG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCTGCCTTTGCATCCCTaGGCTTTTGTCTTGGATGTT +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFLPLHP*AFVLDV
Trigger: AACATCCAAGACAAAAGCCAAGGGATGCAAAGGCAG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTATGAGTGGTGTGGGTTaGCTCCTAGGGTTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFMSGVG*LLGFLV
Trigger: TACAAGAAACCCTAGGAGCAAACCCACACCACTCAT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGTATCCAATTTCTGGTaGCAAGTGACCCAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFVSNFW*QVTQRL
Trigger: CAACCTCTGGGTCACTTGCAACCAGAAATTGGATAC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTATTTGTAACAGTGTGTaGGAACCTCGGAATCCCAGC +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFICNSV*EPRNPS
Trigger: GCTGGGATTCCGAGGTTCCAACACACTGTTACAAAT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTCCAGTGAGGTGCCTTaGCTTCATCTTTCCGTTCAT +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSSSEVP*LHLSVH
Trigger: ATGAACGGAAAGATGAAGCAAAGGCACCTCACTGGA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCATTCTCTTTGGTATTaGAATAGGTGCCCTGTGACC +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFHSLWY*NRCPVT
Trigger: GGTCACAGGGCACCTATTCAAATACCAAAGAGAATG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTCAGAGAGCCACATTaGGATGTCACATGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFREPH*DVTWLR
Trigger: CCTAAGCCATGTGACATCCAAATGTGGCTCTCTGAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTTTTGGCTGTCAATCTaGACATTACCACCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFFWLSI*TLPPPG
Trigger: ACCTGGAGGTGGTAATGTCAAGATTGACAGCCAAAA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTTCTTCTTCCGTGCCTaGCATGTCCTTTTTATCAGG +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFFFFRA*HVLFIR
Trigger: CCTGATAAAAAGGACATGCAAGGCACGGAAGAAGAA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGTTTCCCTTCCCATTTaGGGATATCATCAAATACAT +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVVSLPI*GYHQIH
Trigger: ATGTATTTGATGATATCCCAAAATGGGAAGGGAAAC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGGTGAAAGTATCCCTTaGCTGCACAGTCTCTTGATT +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFGESIP*LHSLLI
Trigger: AATCAAGAGACTGTGCAGCAAAGGGATACTTTCACC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAATCTGTTCTTCCTCTTaGCTTTCTACAGGGAAGCAA +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVICSSS*LSTGKQ
Trigger: TTGCTTCCCTGTAGAAAGCAAAGAGGAAGAACAGAT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTGCGCGGATGCTTCTTaGTCAACACTGAACTCATCT +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSCADAS*STLNSS
Trigger: AGATGAGTTCAGTGTTGACAAAGAAGCATCCGCGCA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCCTTGTTCCACCTTTTaGGATGGTTCTACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSPCSTF*DGSTSA
Trigger: AGCTGAGGTAGAACCATCCAAAAAGGTGGAACAAGG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTTGGCCACCTTCTCTTaGACTTCTGTCTCACTAACT +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFLATFS*TSVSLT
Trigger: AGTTAGTGAGACAGAAGTCAAAGAGAAGGTGGCCAA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCATCACGGGAGAGACTaGTATCTGGCACTAAAACAG +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSHHGRD*YLALKQ
Trigger: CTGTTTTAGTGCCAGATACAAGTCTCTCCCGTGATG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCCCTTGGCTTTTGTCTaGGATGTTTCTATACTTCCC +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFPLAFV*DVSILP
Trigger: GGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAAAGCTGATGAATAAATaGCCCAGATTGGTCAAATCA +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVKLMNK*PRLVKS
Trigger: TGATTTGACCAATCTGGGCAATTTATTCATCAGCTT...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp TGCATCCCTTGGCTTTTGTCTTGGATGTTTCTATACTTCCCCGTTGCCTCAGTAGCCAAATCTAGTAGTTaGGTGCCTTGTATAATCTTT +
Preference number: 5 (lower is better)
Translates to: CIPWLLSWMFLYFPVASVAKSSS*VPCIIF
Trigger: AAAGATTATACAAGGCACCAAACTACTAGATTTGGC...TACTGAGGCAACGGGGAAGTATAGAAACATCCAAGACAAAAGCCAAGGGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGTATCCAATTTCTGGTaGCAAGTGACCCAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSVSNFW*QVTQRL
Trigger: CAACCTCTGGGTCACTTGCAACCAGAAATTGGATAC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACTGATTATTCCACGCTaGCTGTATTACTGTAGGTGT +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLIIPR*LYYCRC
Trigger: ACACCTACAGTAATACAGCAAGCGTGGAATAATCAG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS CCA 90 bp AGTCCTAAACTCCTGCTAAGGGTCAAATCATCCTTATTCTTACTGTaGAGGTCCCTTTTCTCTCCATACACTTTTGGATCAATAGTGAAC +
Preference number: 5 (lower is better)
Translates to: SPKLLLRVKSSLFLL*RSLFSPYTFGSIVN
Trigger: GTTCACTATTGATCCAAAAGTGTATGGAGAGAAAAGGGACCTCCACAGTAAGAATAAGGATGATTTGACCCTTAGCAGGAGTTTAGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCATTCTCTTTGGTATTaGAATAGGTGCCCTGTGACC +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSHSLWY*NRCPVT
Trigger: GGTCACAGGGCACCTATTCAAATACCAAAGAGAATG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGGCTGGTATTTGATGTaGTCTGTTGATCCGATTTTG +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFGWYLM*SVDPIL
Trigger: CAAAATCGGATCAACAGACAACATCAAATACCAGCC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAGCTTGGGCCTTTTCTTaGAAATCTAGTTTTACACTC +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVAWAFS*KSSFTL
Trigger: GAGTGTAAAACTAGATTTCAAAGAAAAGGCCCAAGC...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTTTGGCTGTCAATCTaGACATTACCACCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSFWLSI*TLPPPG
Trigger: ACCTGGAGGTGGTAATGTCAAGATTGACAGCCAAAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCAGGTACTACAAGGCTaGGTTCTGTCTTCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSQVLQG*VLSSVS
Trigger: TGAAACAGAAGACAGAACCAAGCCTTGTAGTACCTG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGATGAACCAGTCCTTTaGTTCTTTTGGAGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSDEPVL*FFWSWR
Trigger: CCTCCAACTCCAAAAGAACAAAAGGACTGGTTCATC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTATTTTAAAACTATCTTaGGCAGTAGCTGGGCCACTG +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFILKLS*AVAGPL
Trigger: CAGTGGCCCAGCTACTGCCAAAGATAGTTTTAAAAT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTTTGCTGCACAGTCTCTaGATTTATGGCCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLLHSL*IYGLLF
Trigger: GAAAAGGAGGCCATAAATCAAGAGACTGTGCAGCAA...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTTGGCACAGCTTCTTaGTCAGAAATGGTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVFGTAS*SEMVVF
Trigger: AAAAACCACCATTTCTGACAAAGAAGCTGTGCCAAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCTGGCTCAATGCTTTTaGTTGCTTCTTCTTTCAAGG +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFLAQCF*LLLLSR
Trigger: CCTTGAAAGAAGAAGCAACAAAAAGCATTGAGCCAG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGTGAACATTCTTTCTaGAGGAGAACTGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSEHSF*RRTGFF
Trigger: GAAGAACCCAGTTCTCCTCAAGAAAGAATGTTCACT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTATCTGTTCTTCCTCTTaGCTTTCTACAGGGAAGCAA +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFICSSS*LSTGKQ
Trigger: TTGCTTCCCTGTAGAAAGCAAAGAGGAAGAACAGAT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAATTAGCTTTCTTCTCTaGGTCAAACTCCTTACTCAG +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVISFLL*VKLLTQ
Trigger: CTGAGTAAGGAGTTTGACCAAGAGAAGAAAGCTAAT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATTCATCAGTTGTGGTTaGCACTACAGTGATGAAATC +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVFISCG*HYSDEI
Trigger: GATTTCATCACTGTAGTGCAAACCACAACTGATGAA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCGCCTAGTGGACCATTaGATTTTAATGGTTCAGATC +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFRLVDH*ILMVQI
Trigger: GATCTGAACCATTAAAATCAAATGGTCCACTAGGCG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATATTCAGGAACTGATTaGGCTCAAAGAGATCATACG +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVYSGTD*AQRDHT
Trigger: CGTATGATCTCTTTGAGCCAAATCAGTTCCTGAATA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGTTCACTGGAGAAGTaGGCCTTTAAACTCTTCACA +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFSSLEK*AFKLFT
Trigger: TGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAACT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS CCA 90 bp ATCCTTATTCTTACTGTGGAGGTCCCTTTTCTCTCCATACACTTTTaGATCAATAGTGAACATTCTTTCTTGAGGAGAACTGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: ILILTVEVPFLSIHF*INSEHSFLRRTGFF
Trigger: GAAGAACCCAGTTCTCCTCAAGAAAGAATGTTCACTATTGATCCAAAAGTGTATGGAGAGAAAAGGGACCTCCACAGTAAGAATAAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 90 bp CTCTTTTCTAGTACAGTATCCAACCTATCATTAGCTTTCTTCTCTTaGTCAAACTCCTTACTCAGTCCTGATTTGTCACCAGAGATATGC +
Preference number: 5 (lower is better)
Translates to: LFSSTVSNLSLAFFS*SNSLLSPDLSPEIC
Trigger: GCATATCTCTGGTGACAAATCAGGACTGAGTAAGGAGTTTGACCAAGAGAAGAAAGCTAATGATAGGTTGGATACTGTACTAGAAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCGTGTTCTCAAAGGGTaGATAATATTTTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFRVLKG*IIFSGF
Trigger: GAAGCCAGAAAATATTATCAACCCTTTGAGAACACG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAGAACCAACTTTAGCTaGGGCCTTTTCTTTGAAATC +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFRTNFS*GLFFEI
Trigger: GATTTCAAAGAAAAGGCCCAAGCTAAAGTTGGTTCT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTACTCCGTCAGAGACTTaGTCCTTTGCCTGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSTPSET*SFACLN
Trigger: ATTTAAACAGGCAAAGGACAAAGTCTCTGACGGAGT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTACTTAGGTCTATTTTCTaGGTAACAATTTGTACCTGC +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVLRSIF*VTICTC
Trigger: GCAGGTACAAATTGTTACCAAGAAAATAGACCTAAG...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTATGTTGCAGAGATTTTTaGTCATCTGGCTGTAAAAAG +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVCCRDF*SSGCKK
Trigger: CTTTTTACAGCCAGATGACAAAAAATCTCTGCAACA...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTCAAGACATCGGCAAATaGATTGACATGCTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFQDIGK*IDMLLC
Trigger: ACAAAGAAGCATGTCAATCAATTTGCCGATGTCTTG...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTTCATCAGTTGTGGTTaGCACTACAGTGATGAAATC +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFFISCG*HYSDEI
Trigger: GATTTCATCACTGTAGTGCAAACCACAACTGATGAA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTAACAGGGTTACGGCTTaGAGTTGTTACAGAAAGCAA +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSNRVTA*SCYRKQ
Trigger: TTGCTTTCTGTAACAACTCAAAGCCGTAACCCTGTT...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTTCACTGGAGAAGTTGGCCTTTAAACTCTTCACAGCTCTGGATTACTTACGTAAATAAATTGCCCAGATaGGTCAAATCAAACCTCACA +
Preference number: 5 (lower is better)
Translates to: VHWRSWPLNSSQLWITYVNKLPR*VKSNLT
Trigger: TGTGAGGTTTGATTTGACCAATCTGGGCAATTTATT...TACGTAAGTAATCCAGAGCTGTGAAGAGTTTAAAGGCCAACTTCTCCAGTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCTGATTATTCCACGCTaGCTGTATTACTGTAGGTGT +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLIIPR*LYYCRC
Trigger: ACACCTACAGTAATACAGCAAGCGTGGAATAATCAG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAACTACAACCAGCCATaGAAGAAATGCCTTTCTATG +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFNYNQP*KKCLSM
Trigger: CATAGAAAGGCATTTCTTCAATGGCTGGTTGTAGTT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS TCA 90 bp ACGAATACCTCCCCTTTGCAACATTTAGGCAATAGTAGCCAGAATTaGAACTCGGTGAAACATCCTTATTTTGGAGTAAACATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: TNTSPLQHLGNSSQN*NSVKHPYFGVNMRK
Trigger: TTTCCTCATGTTTACTCCAAAATAAGGATGTTTCACCGAGTTTCAATTCTGGCTACTATTGCCTAAATGTTGCAAAGGGGAGGTATTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473543.1
CDS GCA 90 bp AATAATTATTTCTGGCAGCAAATATGTGTTCATGCAATTCTTACCTaGCCCCCTTTAGGCTGGTATTTGATGTTGTCTGTTGATCCGATT +
Preference number: 5 (lower is better)
Translates to: NNYFWQQICVHAILT*PPLGWYLMLSVDPI
Trigger: AATCGGATCAACAGACAACATCAAATACCAGCCTAAAGGGGGGCAGGTAAGAATTGCATGAACACATATTTGCTGCCAGAAATAATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478233.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCGTGTTCTCAAAGGGTaGATAATATTTTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSRVLKG*IIFSGF
Trigger: GAAGCCAGAAAATATTATCAACCCTTTGAGAACACG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTGCTTGGGCCTTTTCTTaGAAATCTAGTTTTACACTC +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSAWAFS*KSSFTL
Trigger: GAGTGTAAAACTAGATTTCAAAGAAAAGGCCCAAGC...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTTGTTGCAGAGATTTTTaGTCATCTGGCTGTAAAAAG +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFCCRDF*SSGCKK
Trigger: CTTTTTACAGCCAGATGACAAAAAATCTCTGCAACA...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000360351.8
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAATAAATTGCCCAGATaGGTCAAATCAAACCTCACA +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFNKLPR*VKSNLT
Trigger: TGTGAGGTTTGATTTGACCAATCTGGGCAATTTATT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTAAGCTGATGAATAAATaGCCCAGATTGGTCAAATCA +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFKLMNK*PRLVKS
Trigger: TGATTTGACCAATCTGGGCAATTTATTCATCAGCTT...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp ATTCCTAATGGATGCACTTTTACACCACTTCCTCAACCACAGCTCAAATGCTTTGCCAAATCTAGTAGTTaGGTGCCTTGTATAATCTTT +
Preference number: 5 (lower is better)
Translates to: IPNGCTFTPLPQPQLKCFAKSSS*VPCIIF
Trigger: AAAGATTATACAAGGCACCAAACTACTAGATTTGGC...AAAGCATTTGAGCTGTGGTTGAGGAAGTGGTGTAAAAGTGCATCCATTAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS-3UTR CAA 90 bp GTCACTACAATCAGTACATTCTTCCATTTAATGGCATTCTCTCTTCAGCCTTCTCTTAGGTCTATTTTCTaGGTAACAATTTGTACCTGC +
Preference number: 5 (lower is better)
Translates to: VTTISTFFHLMAFSLQPSLRSIF*VTICTC
Trigger: GCAGGTACAAATTGTTACCAAGAAAATAGACCTAAG...AGAAGGCTGAAGAGAGAATGCCATTAAATGGAAGAATGTACTGATTGTAGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360351.8
ENST00000392194.5
ENST00000673860.1
CDS TCA 90 bp CCTTCAATCTTATCTTTGTCATCAACTCTCATTTCAAAAAGTTCCTaGATTGAGCTCTTTTCAATTAATGCAGATGGTTCGGTCATGGCT +
Preference number: 5 (lower is better)
Translates to: PSILSLSSTLISKSS*IELFSINADGSVMA
Trigger: AGCCATGACCGAACCATCTGCATTAATTGAAAAGAGCTCAATTCAGGAACTTTTTGAAATGAGAGTTGATGACAAAGATAAGATTGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp GTCCACGCCTCTCCCCGCTGGTGGCAGGTTCATGGCTaGGGAACCTGTGTAGAGGACCCACTTGATCCTCAG +
Preference number: 6 (lower is better)
Translates to: VHASPRWWQVHG*GTCVEDPLDPQ
Trigger: CTGAGGATCAAGTGGGTCCTCTACACAGGTTCCCCAGCCATGAACCTGCCACCAGCGGGGAGAGGCGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS CCA 72 bp CGACCTTCTTCTCACTCGGCACCAAGATGGCAGACTTaGGGGTTCCTGGTGTGTGAGGGGTCCTGGGATAGC +
Preference number: 6 (lower is better)
Translates to: RPSSHSAPRWQT*GFLVCEGSWDS
Trigger: GCTATCCCAGGACCCCTCACACACCAGGAACCCCCAAGTCTGCCATCTTGGTGCCGAGTGAGAAGAAGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000464007.1
ENST00000471619.5
ENST00000473543.1
ENST00000475600.5
ENST00000478233.1
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp GCTTCCAGACGAGGAGACATTGCTGAGTCGTCGGGGTaGTGCCACGCTGGATCTGCCTGGGGACTGTGTAAT +
Preference number: 6 (lower is better)
Translates to: ASRRGDIAESSG*CHAGSAWGLCN
Trigger: ATTACACAGTCCCCAGGCAGATCCAGCGTGGCATCACCCCGACGACTCAGCAATGTCTCCTCGTCTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp AGGCACCCTCTTCATCCTCCCTGTATGGGAATCCATTaGCGCTTCGGACAAGTCCTTCCCCTGCTCCGCCTT +
Preference number: 6 (lower is better)
Translates to: RHPLHPPCMGIH*RFGQVLPLLRL
Trigger: AAGGCGGAGCAGGGGAAGGACTTGTCCGAAGCGCCAATGGATTCCCATACAGGGAGGATGAAGAGGGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392193.5
ENST00000392194.5
ENST00000445941.5
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 72 bp CTCTCAGGGGAAGCTGGAGCCTCTGGGGAACCATCTTaGGGTTCTGCCTGGGCTTCAGCTGCCTCTTCTACT +
Preference number: 6 (lower is better)
Translates to: LSGEAGASGEPS*GSAWASAASST
Trigger: AGTAGAAGAGGCAGCTGAAGCCCAGGCAGAACCCAAAGATGGTTCCCCAGAGGCTCCAGCTTCCCCTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp TCGGGAACTATTTGGGCCTCCGCACTAGACTCCATTTaGCCCTTACTGAGGCCCTTGGGTTGGTCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: SGTIWASALDSI*PLLRPLGWSED
Trigger: GTCCTCAGACCAACCCAAGGGCCTCAGTAAGGGCCAAATGGAGTCTAGTGCGGAGGCCCAAATAGTTCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445941.5
ENST00000481649.1
ENST00000673860.1
CDS CCA 72 bp CTCTCTAGCGTTTCTTCTTCTTTCTCCTGGCCTAAGTaGGCCTCTGCACTCTGCGCTGTGACACTGGGGAGC +
Preference number: 6 (lower is better)
Translates to: LSSVSSSFSWPK*ASALCAVTLGS
Trigger: GCTCCCCAGTGTCACAGCGCAGAGTGCAGAGGCCCACTTAGGCCAGGAGAAAGAAGAAGAAACGCTAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673860.1
CDS CAA 72 bp GATTCGAGCAGGTTGATGCTTCCAGACGAGGAGACATaGCTGAGTCGTCGGGGTGATGCCACGCTGGATCTG +
Preference number: 6 (lower is better)
Translates to: DSSRLMLPDEET*LSRRGDATLDL
Trigger: CAGATCCAGCGTGGCATCACCCCGACGACTCAGCAATGTCTCCTCGTCTGGAAGCATCAACCTGCTCGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp ATTTGGGCCTCCGCACTAGACTCCATTTGGCCCTTACTGAGGCCCTaGGGTTGGTCTGAGGACTTAGCAGCCCCACACTCTTTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: IWASALDSIWPLLRP*GWSEDLAAPHSFSG
Trigger: TCCTGAGAAAGAGTGTGGGGCTGCTAAGTCCTCAGACCAACCCAAGGGCCTCAGTAAGGGCCAAATGGAGTCTAGTGCGGAGGCCCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445941.5
ENST00000481649.1
ENST00000673860.1
CDS TCA 72 bp CTCCATTTGGCCCTTACTGAGGCCCTTGGGTTGGTCTaGGGACTTAGCAGCCCCACACTCTTTCTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: LHLALTEALGLV*GLSSPTLFLRK
Trigger: CTTCCTGAGAAAGAGTGTGGGGCTGCTAAGTCCTCAGACCAACCCAAGGGCCTCAGTAAGGGCCAAATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445941.5
ENST00000481649.1
ENST00000673860.1
CDS CCA 72 bp CTTTGGATTAGATCAATAAAATCTGGGCGCAGAAACTaGATGCACCCGCGGTCGCGACTGCCACCGCTCACG +
Preference number: 6 (lower is better)
Translates to: LWIRSIKSGRRN*MHPRSRLPPLT
Trigger: CGTGAGCGGTGGCAGTCGCGACCGCGGGTGCATCCAGTTTCTGCGCCCAGATTTTATTGATCTAATCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199940.10
ENST00000682079.1
CDS CCA 72 bp ATGCTCTCCAAAGGCACCCTCTTCATCCTCCCTGTATaGGAATCCATTGGCGCTTCGGACAAGTCCTTCCCC +
Preference number: 6 (lower is better)
Translates to: MLSKGTLFILPV*ESIGASDKSFP
Trigger: GGGGAAGGACTTGTCCGAAGCGCCAATGGATTCCCATACAGGGAGGATGAAGAGGGTGCCTTTGGAGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392193.5
ENST00000392194.5
ENST00000445941.5
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp ACCTCTTCTCTCTCAGGGGAAGCTGGAGCCTCTGGGGAACCATCTTaGGGTTCTGCCTGGGCTTCAGCTGCCTCTTCTACTTCAAACTCT +
Preference number: 6 (lower is better)
Translates to: TSSLSGEAGASGEPS*GSAWASAASSTSNS
Trigger: AGAGTTTGAAGTAGAAGAGGCAGCTGAAGCCCAGGCAGAACCCAAAGATGGTTCCCCAGAGGCTCCAGCTTCCCCTGAGAGAGAAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp GCTTGGGAGTCGCAGGAGATTTTGGAGGAGTACGTATaGTGGCGACCTTCTTCTCACTCGGCACCAAGATGG +
Preference number: 6 (lower is better)
Translates to: AWESQEILEEYV*WRPSSHSAPRW
Trigger: CCATCTTGGTGCCGAGTGAGAAGAAGGTCGCCATCATACGTACTCCTCCAAAATCTCCTGCGACTCCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000464007.1
ENST00000471619.5
ENST00000473543.1
ENST00000475600.5
ENST00000478233.1
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp AGTGCAGCAGTGACATCCTCAGCCAAAGTGGCAAGCTaGGGAGATTCGAGCAGGTTGATGCTTCCAGACGAG +
Preference number: 6 (lower is better)
Translates to: SAAVTSSAKVAS*GDSSRLMLPDE
Trigger: CTCGTCTGGAAGCATCAACCTGCTCGAATCTCCTCAGCTTGCCACTTTGGCTGAGGATGTCACTGCTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 72 bp TGGCCAGACTCAACACCCATAAATGCATCTGCCTCCTaGGGTGCTTTGGATGAGGGGGTCATGTCCTGTGTA +
Preference number: 6 (lower is better)
Translates to: WPDSTPINASAS*GALDEGVMSCV
Trigger: TACACAGGACATGACCCCCTCATCCAAAGCACCGCAGGAGGCAGATGCATTTATGGGTGTTGAGTCTGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp GATCTGCCTGGGGACTGTGTAATGATCTCAGCCCCATaGTCCACACGGGCTTTAGCATGCTCTCTGAAGTTC +
Preference number: 6 (lower is better)
Translates to: DLPGDCVMISAP*STRALACSLKF
Trigger: GAACTTCAGAGAGCATGCTAAAGCCCGTGTGGACCATGGGGCTGAGATCATTACACAGTCCCCAGGCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp CAGGGAAGCAAGGGGCTTTCTCCAGTGCAGGTGTGGTaGCTGGAAGGTAATCATCCCCTTCATCCATACTTC +
Preference number: 6 (lower is better)
Translates to: QGSKGLSPVQVW*LEGNHPLHPYF
Trigger: GAAGTATGGATGAAGGGGATGATTACCTTCCAGCCACCACACCTGCACTGGAGAAAGCCCCTTGCTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp CTACAGGGAAGCAAGGGGCTTTCTCCAGTGCAGGTGTaGTGGCTGGAAGGTAATCATCCCCTTCATCCATAC +
Preference number: 6 (lower is better)
Translates to: LQGSKGLSPVQV*WLEGNHPLHPY
Trigger: GTATGGATGAAGGGGATGATTACCTTCCAGCCACCACACCTGCACTGGAGAAAGCCCCTTGCTTCCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp CTAGACTCCATTTGGCCCTTACTGAGGCCCTTGGGTTaGTCTGAGGACTTAGCAGCCCCACACTCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: LDSIWPLLRPLG*SEDLAAPHSFS
Trigger: TGAGAAAGAGTGTGGGGCTGCTAAGTCCTCAGACCAACCCAAGGGCCTCAGTAAGGGCCAAATGGAGTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445941.5
ENST00000481649.1
ENST00000673860.1
CDS GCA 72 bp TTTGCTTTCTACAGGGAAGCAAGGGGCTTTCTCCAGTaGAGGTGTGGTGGCTGGAAGGTAATCATCCCCTTC +
Preference number: 6 (lower is better)
Translates to: FAFYREARGFLQ*RCGGWKVIIPF
Trigger: GAAGGGGATGATTACCTTCCAGCCACCACACCTGCACTGGAGAAAGCCCCTTGCTTCCCTGTAGAAAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp GAAGCAAGGGGCTTTCTCCAGTGCAGGTGTGGTGGCTaGAAGGTAATCATCCCCTTCATCCATACTTCCACT +
Preference number: 6 (lower is better)
Translates to: EARGFLQCRCGG*KVIIPFIHTST
Trigger: AGTGGAAGTATGGATGAAGGGGATGATTACCTTCCAGCCACCACACCTGCACTGGAGAAAGCCCCTTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp CCTCAACCACAGTCTCTGATGGGACTGATTTCCTCCTaGCAACCTCAGCATCTGCACTCACAGAAGCCAATC +
Preference number: 6 (lower is better)
Translates to: PQPQSLMGLISS*QPQHLHSQKPI
Trigger: GATTGGCTTCTGTGAGTGCAGATGCTGAGGTTGCCAGGAGGAAATCAGTCCCATCAGAGACTGTGGTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 72 bp TGGATAACTCTGTGCGAGAGTGCTGTACCCTGCTTCTaGTGCTGGAGGACTGGGCTGGGATTCTTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: WITLCESAVPCF*CWRTGLGFFSC
Trigger: ACAGGAAAAGAATCCCAGCCCAGTCCTCCAGCACAAGAAGCAGGGTACAGCACTCTCGCACAGAGTTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp TGGCCAGACTCAACACCCATAAATGCATCTGCCTCCTGCGGTGCTTaGGATGAGGGGGTCATGTCCTGTGTAGCCTCAAGTTTTAGCTCT +
Preference number: 6 (lower is better)
Translates to: WPDSTPINASASCGA*DEGVMSCVASSFSS
Trigger: AGAGCTAAAACTTGAGGCTACACAGGACATGACCCCCTCATCCAAAGCACCGCAGGAGGCAGATGCATTTATGGGTGTTGAGTCTGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp CATCCTCGATGGTCACAACAGACTCAATCACTCCTTTGTGTTCACTaGGGCAGGTCTCCACAAATTCCTCCCTGGCACCTGAGACACCCA +
Preference number: 6 (lower is better)
Translates to: HPRWSQQTQSLLCVH*GRSPQIPPWHLRHP
Trigger: TGGGTGTCTCAGGTGCCAGGGAGGAATTTGTGGAGACCTGCCCAAGTGAACACAAAGGAGTGATTGAGTCTGTTGTGACCATCGAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp ACATTCTTCAGGTCTGGCAGTGGTTGGTTAATAAGCCGAAGCTGCTaGGGAGTCGCAGGAGATTTTGGAGGAGTACGTATGATGGCGACC +
Preference number: 6 (lower is better)
Translates to: TFFRSGSGWLISRSC*GVAGDFGGVRMMAT
Trigger: GGTCGCCATCATACGTACTCCTCCAAAATCTCCTGCGACTCCCAAGCAGCTTCGGCTTATTAACCAACCACTGCCAGACCTGAAGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000471619.5
ENST00000473543.1
ENST00000475600.5
ENST00000478233.1
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp ATTTCCTCCTGGCAACCTCAGCATCTGCACTCACAGAAGCCAATCTaGACCTTGTGCCTGCCAGATCTAGCATTTCAGGAAGGTCAGGTG +
Preference number: 6 (lower is better)
Translates to: ISSWQPQHLHSQKPI*TLCLPDLAFQEGQV
Trigger: CACCTGACCTTCCTGAAATGCTAGATCTGGCAGGCACAAGGTCAAGATTGGCTTCTGTGAGTGCAGATGCTGAGGTTGCCAGGAGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp TCCTCCCTGGCACCTGAGACACCCAGGTCAGTTATCTaGAGGGTGTCTGAGCGGAAGAGCAGTTTATCATAT +
Preference number: 6 (lower is better)
Translates to: SSLAPETPRSVI*RVSERKSSLSY
Trigger: ATATGATAAACTGCTCTTCCGCTCAGACACCCTTCAGATAACTGACCTGGGTGTCTCAGGTGCCAGGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp TCTGAAGGCTCAGCTGTAGAGGGAGTCAATTCCTGTTaGTCGTGGAACTCCATCTTCGAGGCTTCCTCCACT +
Preference number: 6 (lower is better)
Translates to: SEGSAVEGVNSC*SWNSIFEASST
Trigger: AGTGGAGGAAGCCTCGAAGATGGAGTTCCACGATCAACAGGAATTGACTCCCTCTACAGCTGAGCCTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447185.5
CDS TCA 72 bp CCTTTCAGGACTGCTACAGCCTCAGCAGTGACTACTTaGACTATCCTTGCAGACACCTCCTCTCGTGGAACT +
Preference number: 6 (lower is better)
Translates to: PFRTATASAVTT*TILADTSSRGT
Trigger: AGTTCCACGAGAGGAGGTGTCTGCAAGGATAGTTCAAGTAGTCACTGCTGAGGCTGTAGCAGTCCTGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471619.5
ENST00000482864.5
CDS GCA 72 bp CAGCAATACCACTCAAGTCTAGCCTTTGAGAACTGCTaGAGAATCCTTCTCCGGGAGCATTATCCCCACAGG +
Preference number: 6 (lower is better)
Translates to: QQYHSSLAFENC*RILLREHYPHR
Trigger: CCTGTGGGGATAATGCTCCCGGAGAAGGATTCTGCAGCAGTTCTCAAAGGCTAGACTTGAGTGGTATTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000361559.8
ENST00000445941.5
ENST00000673860.1
CDS GCA 72 bp CTTCAGGTAAATCTGATGGATAACTCTGTGCGAGAGTaGTGTACCCTGCTTCTTGTGCTGGAGGACTGGGCT +
Preference number: 6 (lower is better)
Translates to: LQVNLMDNSVRE*CTLLLVLEDWA
Trigger: AGCCCAGTCCTCCAGCACAAGAAGCAGGGTACAGCACTCTCGCACAGAGTTATCCATCAGATTTACCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 72 bp CAGCATCTGCACTCACAGAAGCCAATCTTGACCTTGTaGCTGCCAGATCTAGCATTTCAGGAAGGTCAGGTG +
Preference number: 6 (lower is better)
Translates to: QHLHSQKPILTL*LPDLAFQEGQV
Trigger: CACCTGACCTTCCTGAAATGCTAGATCTGGCAGGCACAAGGTCAAGATTGGCTTCTGTGAGTGCAGATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 72 bp GGCTTCTGGTACCAAATGCCTGACAGGCATTTTAATTaGCTCCATCCAAGTGTGTCCCCAGGAGTCGAGTCT +
Preference number: 6 (lower is better)
Translates to: GFWYQMPDRHFN*LHPSVSPGVES
Trigger: AGACTCGACTCCTGGGGACACACTTGGATGGAGGCAATTAAAATGCCTGTCAGGCATTTGGTACCAGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392193.5
CDS CCA 72 bp CGAGAGTGCTGTACCCTGCTTCTTGTGCTGGAGGACTaGGCTGGGATTCTTTTCCTGTTTGAAACTCCTTGT +
Preference number: 6 (lower is better)
Translates to: RECCTLLLVLED*AGILFLFETPC
Trigger: ACAAGGAGTTTCAAACAGGAAAAGAATCCCAGCCCAGTCCTCCAGCACAAGAAGCAGGGTACAGCACTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 72 bp AGGTCTGGCAGTGGTTGGTTAATAAGCCGAAGCTGCTaGGGAGTCGCAGGAGATTTTGGAGGAGTACGTATG +
Preference number: 6 (lower is better)
Translates to: RSGSGWLISRSC*GVAGDFGGVRM
Trigger: CATACGTACTCCTCCAAAATCTCCTGCGACTCCCAAGCAGCTTCGGCTTATTAACCAACCACTGCCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000471619.5
ENST00000473543.1
ENST00000475600.5
ENST00000478233.1
ENST00000673860.1
ENST00000682079.1
CDS CAA 72 bp GAAGGTCTTGGGAGAGAAGAGCGCTTTTCTGGGCTCTaGGTTACTCCGTCAGAGACTTTGTCCTTTGCCTGT +
Preference number: 6 (lower is better)
Translates to: EGLGREERFSGL*VTPSETLSFAC
Trigger: ACAGGCAAAGGACAAAGTCTCTGACGGAGTAACCAAGAGCCCAGAAAAGCGCTCTTCTCTCCCAAGACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000471619.5
ENST00000475600.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp GTGCAGATGCCTCTGTTAGCGGTGCTGAGGTCCAGTGAGGTGCCTTaGCTTCATCTTTCCGTTCATCTGCCATTCTTCAATGCCTTGTTA +
Preference number: 6 (lower is better)
Translates to: VQMPLLAVLRSSEVP*LHLSVHLPFFNALL
Trigger: TAACAAGGCATTGAAGAATGGCAGATGAACGGAAAGATGAAGCAAAGGCACCTCACTGGACCTCAGCACCGCTAACAGAGGCATCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392193.5
ENST00000392194.5
ENST00000445941.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp CTCTTGTTCACCTTTCAGGACTGCTACAGCCTCAGCAGTGACTACTaGAACTATCCTTGCAGACACCTCCTCTCGTGGAACTGCCTTTTC +
Preference number: 6 (lower is better)
Translates to: LLFTFQDCYSLSSDY*NYPCRHLLSWNCLF
Trigger: GAAAAGGCAGTTCCACGAGAGGAGGTGTCTGCAAGGATAGTTCAAGTAGTCACTGCTGAGGCTGTAGCAGTCCTGAAAGGTGAACAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471619.5
ENST00000482864.5
CDS TCA 72 bp CCTTTCAGGACTGCTACAGCCTCAGCAGTGACTACTTaGACTATCCTTGCAGACACCTCCTCTGCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: PFRTATASAVTT*TILADTSSAVS
Trigger: AGAAACAGCAGAGGAGGTGTCTGCAAGGATAGTTCAAGTAGTCACTGCTGAGGCTGTAGCAGTCCTGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000445941.5
ENST00000447185.5
ENST00000452717.1
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp CTTGTTCACCTTTCAGGACTGCTACAGCCTCAGCAGTaGCTACTTGAACTATCCTTGCAGACACCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LVHLSGLLQPQQ*LLELSLQTPPL
Trigger: CAGAGGAGGTGTCTGCAAGGATAGTTCAAGTAGTCACTGCTGAGGCTGTAGCAGTCCTGAAAGGTGAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000445941.5
ENST00000447185.5
ENST00000452717.1
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp CATCTTGAGTGTCCACCCAGAGGCTGTCAGCGTCCATaGTGGAGTCGTCAATGGTGGTCTCATCTTTGTAAT +
Preference number: 6 (lower is better)
Translates to: HLECPPRGCQRP*WSRQWWSHLCN
Trigger: ATTACAAAGATGAGACCACCATTGACGACTCCATCATGGACGCTGACAGCCTCTGGGTGGACACTCAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp CTTGTTCACCTTTCAGGACTGCTACAGCCTCAGCAGTaGCTACTTGAACTATCCTTGCAGACACCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: LVHLSGLLQPQQ*LLELSLQTPPL
Trigger: GAGAGGAGGTGTCTGCAAGGATAGTTCAAGTAGTCACTGCTGAGGCTGTAGCAGTCCTGAAAGGTGAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471619.5
ENST00000482864.5
CDS GCA 72 bp CTGTGGGACCCTGACTCCCCTTCATCAGTTGTGGTTTaGACTACAGTGATGAAATCATCCTCGATGGTCACA +
Preference number: 6 (lower is better)
Translates to: LWDPDSPSSVVV*TTVMKSSSMVT
Trigger: TGTGACCATCGAGGATGATTTCATCACTGTAGTGCAAACCACAACTGATGAAGGGGAGTCAGGGTCCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp AATAAGCCGAAGCTGCTTGGGAGTCGCAGGAGATTTTaGAGGAGTACGTATGATGGCGACCTTCTTCTCACT +
Preference number: 6 (lower is better)
Translates to: NKPKLLGSRRRF*RSTYDGDLLLT
Trigger: AGTGAGAAGAAGGTCGCCATCATACGTACTCCTCCAAAATCTCCTGCGACTCCCAAGCAGCTTCGGCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000471619.5
ENST00000473543.1
ENST00000475600.5
ENST00000478233.1
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp AAGGTCTTGGGAGAGAAGAGCGCTTTTCTGGGCTCTTaGTTACTCCGTCAGAGACTTTGTCCTTTGCCTGTT +
Preference number: 6 (lower is better)
Translates to: KVLGEKSAFLGS*LLRQRLCPLPV
Trigger: AACAGGCAAAGGACAAAGTCTCTGACGGAGTAACCAAGAGCCCAGAAAAGCGCTCTTCTCTCCCAAGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000471619.5
ENST00000475600.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp AATGGAGGAAGGTCTTGGGAGAGAAGAGCGCTTTTCTaGGCTCTTGGTTACTCCGTCAGAGACTTTGTCCTT +
Preference number: 6 (lower is better)
Translates to: NGGRSWERRALF*ALGYSVRDFVL
Trigger: AAGGACAAAGTCTCTGACGGAGTAACCAAGAGCCCAGAAAAGCGCTCTTCTCTCCCAAGACCTTCCTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000471619.5
ENST00000475600.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp AATGGAGGAAGGTCTTGGGAGAGAAGAGCGCTTTTCTaGGCTCTTGGTTACTCCGTCCTGATTGGAGAAAAC +
Preference number: 6 (lower is better)
Translates to: NGGRSWERRALF*ALGYSVLIGEN
Trigger: GTTTTCTCCAATCAGGACGGAGTAACCAAGAGCCCAGAAAAGCGCTCTTCTCTCCCAAGACCTTCCTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464007.1
CDS CAA 72 bp CCTCTGTTAGCGGTGCTGAGGTCCAGTGAGGTGCCTTaGCTTCATCTTTCCGTTCATCTGCCATTCTTCAAT +
Preference number: 6 (lower is better)
Translates to: PLLAVLRSSEVP*LHLSVHLPFFN
Trigger: ATTGAAGAATGGCAGATGAACGGAAAGATGAAGCAAAGGCACCTCACTGGACCTCAGCACCGCTAACAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392193.5
ENST00000392194.5
ENST00000445941.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 72 bp TGGCAACCTCAGCATCTGCACTCACAGAAGCCAATCTaGACCTTGTGCCTGCCAGATCTAGCATTTCAGGAA +
Preference number: 6 (lower is better)
Translates to: WQPQHLHSQKPI*TLCLPDLAFQE
Trigger: TTCCTGAAATGCTAGATCTGGCAGGCACAAGGTCAAGATTGGCTTCTGTGAGTGCAGATGCTGAGGTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp CGTCCGCCACCTGGCCTGTGGCGGATGTTCTTCAGAGAGCCACATTaGGATGTCACATGGCTTAGGTCTATTTTCTTGGTAACAATTTGT +
Preference number: 6 (lower is better)
Translates to: RPPPGLWRMFFREPH*DVTWLRSIFLVTIC
Trigger: ACAAATTGTTACCAAGAAAATAGACCTAAGCCATGTGACATCCAAATGTGGCTCTCTGAAGAACATCCGCCACAGGCCAGGTGGCGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000475600.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp GTGATGAAATCATCCTCGATGGTCACAACAGACTCAATCACTCCTTaGTGTTCACTTGGGCAGGTCTCCACAAATTCCTCCCTGGCACCT +
Preference number: 6 (lower is better)
Translates to: VMKSSSMVTTDSITP*CSLGQVSTNSSLAP
Trigger: AGGTGCCAGGGAGGAATTTGTGGAGACCTGCCCAAGTGAACACAAAGGAGTGATTGAGTCTGTTGTGACCATCGAGGATGATTTCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp CTGCTGTTTCTCTGTCAGCTGAGGTCAGCTCTCCGTTaGTCCCATTCTCTTTGGTATTTGAATAGGTGCCCT +
Preference number: 6 (lower is better)
Translates to: LLFLCQLRSALR*SHSLWYLNRCP
Trigger: AGGGCACCTATTCAAATACCAAAGAGAATGGGATCAACGGAGAGCTGACCTCAGCTGACAGAGAAACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392193.5
ENST00000392194.5
ENST00000445941.5
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp CTTGAACAGGTGATGGCAATGGGACTGTGTACTTATTaGACACACAGTAGCCCAGGTCTTCGAGCTGACTGT +
Preference number: 6 (lower is better)
Translates to: LEQVMAMGLCTY*THSSPGLRADC
Trigger: ACAGTCAGCTCGAAGACCTGGGCTACTGTGTGTTCAATAAGTACACAGTCCCATTGCCATCACCTGTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp TCTGAAGGCTCAGCTGTAGAGGGAGTCAATTCCTGTTaGTCGTGGAACTCCATCTTCGAGGCTGGTTTCAAT +
Preference number: 6 (lower is better)
Translates to: SEGSAVEGVNSC*SWNSIFEAGFN
Trigger: ATTGAAACCAGCCTCGAAGATGGAGTTCCACGATCAACAGGAATTGACTCCCTCTACAGCTGAGCCTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461253.1
CDS TCA 72 bp GCAGTGAGGCTGTGTGATTTTCTGCAGATCCACCCTTaGATGCTAAATAACTCTGCTCTGCACACTCCTCTC +
Preference number: 6 (lower is better)
Translates to: AVRLCDFLQIHP*MLNNSALHTPL
Trigger: GAGAGGAGTGTGCAGAGCAGAGTTATTTAGCATTCAAGGGTGGATCTGCAGAAAATCACACAGCCTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471619.5
CDS GCA 72 bp CTAAATGAGAAATATTCACAAGCCCTGCTTAGCGAGTaGAGCAGTGACATCCTCAGCCAAAGTGGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: LNEKYSQALLSE*SSDILSQSGKL
Trigger: CAGCTTGCCACTTTGGCTGAGGATGTCACTGCTGCACTCGCTAAGCAGGGCTTGTGAATATTTCTCATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 72 bp TCGGTTAGAGACAAGCTGAAGAATGATTTAGCGGTTTaGCATAGGGGCTTCTGGTACCAAATGCCTGACAGG +
Preference number: 6 (lower is better)
Translates to: SVRDKLKNDLAV*HRGFWYQMPDR
Trigger: CCTGTCAGGCATTTGGTACCAGAAGCCCCTATGGCAAACCGCTAAATCATTCTTCAGCTTGTCTCTAACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392193.5
CDS CCA 72 bp AAGGTCTTGGGAGAGAAGAGCGCTTTTCTGGGCTCTTaGTTACTCCGTCCTTGTTCCCTGATTTTGAGTATG +
Preference number: 6 (lower is better)
Translates to: KVLGEKSAFLGS*LLRPCSLILSM
Trigger: CATACTCAAAATCAGGGAACAAGGACGGAGTAACCAAGAGCCCAGAAAAGCGCTCTTCTCTCCCAAGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199940.10
ENST00000452717.1
CDS CCA 72 bp CGTTGGCATTTCGATGAACCAGTCCTTTTGTTCTTTTaGAGTTGGAGGCTCTTTAGGGAGGTCAATGCCAGG +
Preference number: 6 (lower is better)
Translates to: RWHFDEPVLLFF*SWRLFREVNAR
Trigger: CCTGGCATTGACCTCCCTAAAGAGCCTCCAACTCCAAAAGAACAAAAGGACTGGTTCATCGAAATGCCAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360351.8
ENST00000445941.5
ENST00000447185.5
ENST00000461253.1
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp CCTGGACAGCAAAATCCAGACCTTGTTCCACCTTTTTaGATGGTTCTACCTCAGCTATCTCTGGCACTGAAC +
Preference number: 6 (lower is better)
Translates to: PGQQNPDLVPPF*MVLPQLSLALN
Trigger: GTTCAGTGCCAGAGATAGCTGAGGTAGAACCATCCAAAAAGGTGGAACAAGGTCTGGATTTTGCTGTCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 72 bp GAAGGTCTTGGGAGAGAAGAGCGCTTTTCTGGGCTCTaGGTTACTCCGTCCTTGTTCCCTGATTTTGAGTAT +
Preference number: 6 (lower is better)
Translates to: EGLGREERFSGL*VTPSLFPDFEY
Trigger: ATACTCAAAATCAGGGAACAAGGACGGAGTAACCAAGAGCCCAGAAAAGCGCTCTTCTCTCCCAAGACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199940.10
ENST00000452717.1
CDS CAA 72 bp CCTGGCCTGTGGCGGATGTTCTTCAGAGAGCCACATTaGGATGTCACATGGCTTAGGTCTATTTTCTTGGTA +
Preference number: 6 (lower is better)
Translates to: PGLWRMFFREPH*DVTWLRSIFLV
Trigger: TACCAAGAAAATAGACCTAAGCCATGTGACATCCAAATGTGGCTCTCTGAAGAACATCCGCCACAGGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000199940.10
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000475600.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 72 bp TGCGCGGATGCTTCTTTGTCAACACTGAACTCATCTTaGACTCTTCCGGCTGCTGCCAGTTTCACTTCAATC +
Preference number: 6 (lower is better)
Translates to: CADASLSTLNSS*TLPAAASFTSI
Trigger: GATTGAAGTGAAACTGGCAGCAGCCGGAAGAGTCAAAGATGAGTTCAGTGTTGACAAAGAAGCATCCGCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp CCCTGCTTCTTGTGCTGGAGGACTGGGCTGGGATTCTTTTCCTGTTaGAAACTCCTTGTCACCATTTTTATGCATGGGAGACATGGTATC +
Preference number: 6 (lower is better)
Translates to: PCFLCWRTGLGFFSC*KLLVTIFMHGRHGI
Trigger: GATACCATGTCTCCCATGCATAAAAATGGTGACAAGGAGTTTCAAACAGGAAAAGAATCCCAGCCCAGTCCTCCAGCACAAGAAGCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp CCAGAGATATGCGCGGATGCTTCTTTGTCAACACTGAACTCATCTTaGACTCTTCCGGCTGCTGCCAGTTTCACTTCAATCAGTGAAAGG +
Preference number: 6 (lower is better)
Translates to: PEICADASLSTLNSS*TLPAAASFTSISER
Trigger: CCTTTCACTGATTGAAGTGAAACTGGCAGCAGCCGGAAGAGTCAAAGATGAGTTCAGTGTTGACAAAGAAGCATCCGCGCATATCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 90 bp TTACTCAGTCCTGATTTGTCACCAGAGATATGCGCGGATGCTTCTTaGTCAACACTGAACTCATCTTTGACTCTTCCGGCTGCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: LLSPDLSPEICADAS*STLNSSLTLPAAAS
Trigger: ACTGGCAGCAGCCGGAAGAGTCAAAGATGAGTTCAGTGTTGACAAAGAAGCATCCGCGCATATCTCTGGTGACAAATCAGGACTGAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp TCTGAAGGCTCAGCTGTAGAGGGAGTCAATTCCTGTTaGTCGTGGAACTCCATCTTCGAGGCTGTAAGTAAA +
Preference number: 6 (lower is better)
Translates to: SEGSAVEGVNSC*SWNSIFEAVSK
Trigger: TTTACTTACAGCCTCGAAGATGGAGTTCCACGATCAACAGGAATTGACTCCCTCTACAGCTGAGCCTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360351.8
ENST00000445941.5
ENST00000481649.1
ENST00000673860.1
ENST00000682079.1
CDS GCA 72 bp TTCTGTTTCATGTCTTCCAGGCTGGCAACAAGAGTGTaGCCAAACAAAGCTAGGGGTGCTTTTTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: FCFMSSRLATRV*PNKARGAFSSS
Trigger: GGAAGAAGAAAAAGCACCCCTAGCTTTGTTTGGGCACACTCTTGTTGCCAGCCTGGAAGACATGAAACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360351.8
ENST00000445941.5
ENST00000447185.5
ENST00000461253.1
ENST00000673860.1
ENST00000682079.1
CDS GCA 72 bp TGCTGGTTCAGATACGATCGTTTCATGCAATGGCTCTaGAACATCAGAAGGCGTGATGGATATATCTGGGGT +
Preference number: 6 (lower is better)
Translates to: CWFRYDRFMQWL*NIRRRDGYIWG
Trigger: ACCCCAGATATATCCATCACGCCTTCTGATGTTGCAGAGCCATTGCATGAAACGATCGTATCTGAACCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 72 bp TATAGGTTCCTGTCCACTGGGGGTGAAAGTATCCCTTaGCTGCACAGTCTCTTGATTTATGGCCTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: YRFLSTGGESIP*LHSLLIYGLLF
Trigger: GAAAAGGAGGCCATAAATCAAGAGACTGTGCAGCAAAGGGATACTTTCACCCCCAGTGGACAGGAACCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360351.8
ENST00000445941.5
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 72 bp CCTGATTTGTCACCAGAGATATGCGCGGATGCTTCTTaGTCAACACTGAACTCATCTTTGACTCTTCCGGCT +
Preference number: 6 (lower is better)
Translates to: PDLSPEICADAS*STLNSSLTLPA
Trigger: AGCCGGAAGAGTCAAAGATGAGTTCAGTGTTGACAAAGAAGCATCCGCGCATATCTCTGGTGACAAATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp CAACATATCTGTGGTAGGCTCTTGGTCTTTCTGTTCTaGGAAAGTGTGCTCTGTGGAGGTCTGAATTATGCC +
Preference number: 6 (lower is better)
Translates to: QHICGRLLVFLF*ESVLCGGLNYA
Trigger: GGCATAATTCAGACCTCCACAGAGCACACTTTCTCAGAACAGAAAGACCAAGAGCCTACCACAGATATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp ACTTCTGTCTCACTAACTTTAGTGCCTTCTTTCATGTaGCCAGACTCAACACCCATAAATGCATCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: TSVSLTLVPSFM*PDSTPINASAS
Trigger: GGAGGCAGATGCATTTATGGGTGTTGAGTCTGGCCACATGAAAGAAGGCACTAAAGTTAGTGAGACAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp CTGAAGAATGATTTAGCGGTTTGCCATAGGGGCTTCTaGTACCAAATGCCTGACAGGCATTTTAATTGCCTC +
Preference number: 6 (lower is better)
Translates to: LKNDLAVCHRGF*YQMPDRHFNCL
Trigger: GAGGCAATTAAAATGCCTGTCAGGCATTTGGTACCAGAAGCCCCTATGGCAAACCGCTAAATCATTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392193.5
CDS TCA 72 bp TCGTTTCATGCAATGGCTCTGCAACATCAGAAGGCGTaGTGGATATATCTGGGGTCTCTTTGCTTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: SFHAMALQHQKA*WIYLGSLCFLL
Trigger: AAGAAGAAAGCAAAGAGACCCCAGATATATCCATCACGCCTTCTGATGTTGCAGAGCCATTGCATGAAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 72 bp AGTGTTTTAGAGGTCATGGCTGAATCTGTAACTGCTTaGTCCAAACTTACAGGGAACGAGTCCTGTTTCAAC +
Preference number: 6 (lower is better)
Translates to: SVLEVMAESVTA*SKLTGNESCFN
Trigger: GTTGAAACAGGACTCGTTCCCTGTAAGTTTGGAGCAAGCAGTTACAGATTCAGCCATGACCTCTAAAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 72 bp AACTCCTTACTCAGTCCTGATTTGTCACCAGAGATATaGGCGGATGCTTCTTTGTCAACACTGAACTCATCT +
Preference number: 6 (lower is better)
Translates to: NSLLSPDLSPEI*ADASLSTLNSS
Trigger: AGATGAGTTCAGTGTTGACAAAGAAGCATCCGCGCATATCTCTGGTGACAAATCAGGACTGAGTAAGGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp CTGCTGCCAGTTTCACTTCAATCAGTGAAAGGTCTGTaGCCAAATCTCTTCGAACTTTATCATCAGTGCCTT +
Preference number: 6 (lower is better)
Translates to: LLPVSLQSVKGL*PNLFELYHQCL
Trigger: AAGGCACTGATGATAAAGTTCGAAGAGATTTGGCCACAGACCTTTCACTGATTGAAGTGAAACTGGCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp AATCTCTGCTGGTTCAGATACGATCGTTTCATGCAATaGCTCTGCAACATCAGAAGGCGTGATGGATATATC +
Preference number: 6 (lower is better)
Translates to: NLCWFRYDRFMQ*LCNIRRRDGYI
Trigger: GATATATCCATCACGCCTTCTGATGTTGCAGAGCCATTGCATGAAACGATCGTATCTGAACCAGCAGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 72 bp CCACATTTGGATGTCACATGGCTTAGGTCTATTTTCTaGGTAACAATTTGTACATTTCCGCCCCCAGCCGAA +
Preference number: 6 (lower is better)
Translates to: PHLDVTWLRSIF*VTICTFPPPAE
Trigger: TTCGGCTGGGGGCGGAAATGTACAAATTGTTACCAAGAAAATAGACCTAAGCCATGTGACATCCAAATGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000199940.10
ENST00000475600.5
CDS TCA 72 bp CAAGGGCTATGGAATCTAGGCAAGACATCGGCAAATTaGTTGACATGCTTCTTTGTTCTATTGCAGACCTAC +
Preference number: 6 (lower is better)
Translates to: QGLWNLGKTSAN*LTCFFVLLQTY
Trigger: GTAGGTCTGCAATAGAACAAAGAAGCATGTCAATCAATTTGCCGATGTCTTGCCTAGATTCCATAGCCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp CTGCCAGATCTAGCATTTCAGGAAGGTCAGGTGCCATaGCAGTACCATTTTTGTAAAAATCTTTGGCTAGGA +
Preference number: 6 (lower is better)
Translates to: LPDLAFQEGQVP*QYHFCKNLWLG
Trigger: TCCTAGCCAAAGATTTTTACAAAAATGGTACTGTCATGGCACCTGACCTTCCTGAAATGCTAGATCTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS GCA 72 bp TTCTGGCAGCAAATATGTGTTCATGCAATTCTTACCTaGCCCCCTTTAGGCTGGTATTTGATGTTGTCTGTT +
Preference number: 6 (lower is better)
Translates to: FWQQICVHAILT*PPLGWYLMLSV
Trigger: AACAGACAACATCAAATACCAGCCTAAAGGGGGGCAGGTAAGAATTGCATGAACACATATTTGCTGCCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478233.1
CDS CAA 72 bp CCAAGGGCTATGGAATCTAGGCAAGACATCGGCAAATaGATTGACATGCTTCTTTGTTCTATTGCAGACCTA +
Preference number: 6 (lower is better)
Translates to: PRAMESRQDIGK*IDMLLCSIADL
Trigger: TAGGTCTGCAATAGAACAAAGAAGCATGTCAATCAATTTGCCGATGTCTTGCCTAGATTCCATAGCCCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp CCTGCTGCTGTGGTTTTCCGCTTAACACAGGAGAGATaGGTTGGTCTAGTATATTTGATAGCAGGTTTTAAA +
Preference number: 6 (lower is better)
Translates to: PAAVVFRLTQER*VGLVYLIAGFK
Trigger: TTTAAAACCTGCTATCAAATATACTAGACCAACTCATCTCTCCTGTGTTAAGCGGAAAACCACAGCAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp CGGATGTTCTTCAGAGAGCCACATTTGGATGTCACATaGCTTAGGTCTATTTTCTTGGTAACAATTTGTACC +
Preference number: 6 (lower is better)
Translates to: RMFFREPHLDVT*LRSIFLVTICT
Trigger: GGTACAAATTGTTACCAAGAAAATAGACCTAAGCCATGTGACATCCAAATGTGGCTCTCTGAAGAACATCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360351.8
ENST00000361559.8
ENST00000392194.5
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CCA 72 bp CGGATGTTCTTCAGAGAGCCACATTTGGATGTCACATaGCTTAGGTCTATTTTCTTGGTAACAATTTGTACA +
Preference number: 6 (lower is better)
Translates to: RMFFREPHLDVT*LRSIFLVTICT
Trigger: TGTACAAATTGTTACCAAGAAAATAGACCTAAGCCATGTGACATCCAAATGTGGCTCTCTGAAGAACATCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199940.10
ENST00000475600.5
CDS CCA 72 bp CTTACTGTGGAGGTCCCTTTTCTCTCCATACACTTTTaGATCAATAGTGAACATTCTTTCTTGAGGAGAACT +
Preference number: 6 (lower is better)
Translates to: LTVEVPFLSIHF*INSEHSFLRRT
Trigger: AGTTCTCCTCAAGAAAGAATGTTCACTATTGATCCAAAAGTGTATGGAGAGAAAAGGGACCTCCACAGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS TCA 72 bp TCCCCTTTGCAACATTTAGGCAATAGTAGCCAGAATTaGAACTCGGTGAAACATCCTTATTTTGGAGTAAAC +
Preference number: 6 (lower is better)
Translates to: SPLQHLGNSSQN*NSVKHPYFGVN
Trigger: GTTTACTCCAAAATAAGGATGTTTCACCGAGTTTCAATTCTGGCTACTATTGCCTAAATGTTGCAAAGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473543.1
CDS TCA 72 bp TACCCAGTAACAAACAGAAGGAATGGGCATGTCATGTaGTTTTCGTTGTATTTCAGAGGCTATCTTCCTAAT +
Preference number: 6 (lower is better)
Translates to: YPVTNRRNGHVM*FSLYFRGYLPN
Trigger: ATTAGGAAGATAGCCTCTGAAATACAACGAAAATCACATGACATGCCCATTCCTTCTGTTTGTTACTGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478233.1
CDS CAA 90 bp CAATCTTATCTTTGTCATCAACTCTCATTTCAAAAAGTTCCTGAATaGAGCTCTTTTCAATTAATGCAGATGGTTCGGTCATGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: QSYLCHQLSFQKVPE*SSFQLMQMVRSWLS
Trigger: AGAAAGCCATGACCGAACCATCTGCATTAATTGAAAAGAGCTCAATTCAGGAACTTTTTGAAATGAGAGTTGATGACAAAGATAAGATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1
CDS CAA 72 bp CTTTGTCATCAACTCTCATTTCAAAAAGTTCCTGAATaGAGCTCTTTTCAATTAATGCAGATGGTTCGGTCA +
Preference number: 6 (lower is better)
Translates to: LCHQLSFQKVPE*SSFQLMQMVRS
Trigger: TGACCGAACCATCTGCATTAATTGAAAAGAGCTCAATTCAGGAACTTTTTGAAATGAGAGTTGATGACAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360351.8
ENST00000447185.5
ENST00000673860.1
ENST00000682079.1