Pregenerated sensors for MAP1LC3B (Homo sapiens)
Ensembl gene IDs: ENSG00000140941Ensembl transcript IDs: ENST00000564638.1, ENST00000564844.1, ENST00000565788.1, ENST00000570189.5, ENST00000650688.1
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCGGGCTCCCTCGACGGGAAAACCAGCCCTGAAGGTGACGCGCTaGGTCCCGGCGCAGCCCCGCTTCAGAGCCGAACGGCCCAGCGCG | + |
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Preference number: 1 (lower is better) Translates to: GRAPSTGKPALKVTR*VPAQPRFRAERPSA Trigger: CGCGCTGGGCCGTTCGGCTCTGAAGCGGGGCTGCGCCGGGACCCAGCGCGTCACCTTCAGGGCTGGTTTTCCCGTCGAGGGAGCCCGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR CCA 90 bp | CCACCCCAGCTCCTGGGCTACAGACAGGAACTGGCAACACCGCTGTaGGCCGTCCCGGGCGCGGCGAGGCCGGGGCCCAGCACATTCCCC | + |
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Preference number: 1 (lower is better) Translates to: PPQLLGYRQELATPL*AVPGAARPGPSTFP Trigger: GGGGAATGTGCTGGGCCCCGGCCTCGCCGCGCCCGGGACGGCCCACAGCGGTGTTGCCAGTTCCTGTCTGTAGCCCAGGAGCTGGGGTGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR GCA 90 bp | TTCCAGTCTGAACCGGCAGAAAAGGGATGTATTCGGTATTCCTGGTaGCAAGGTGAGAACGTAATCGCAAACCCAAGAGAAGTCTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: FQSEPAEKGCIRYSW*QGENVIANPREVSH Trigger: GTGGGAGACTTCTCTTGGGTTTGCGATTACGTTCTCACCTTGGCACCAGGAATACCGAATACATCCCTTTTCTGCCGGTTCAGACTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR CCA 90 bp | GGTTTCCAGTCTGAACCGGCAGAAAAGGGATGTATTCGGTATTCCTaGTGCCAAGGTGAGAACGTAATCGCAAACCCAAGAGAAGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: GFQSEPAEKGCIRYS*CQGENVIANPREVS Trigger: GGAGACTTCTCTTGGGTTTGCGATTACGTTCTCACCTTGGCACCAGGAATACCGAATACATCCCTTTTCTGCCGGTTCAGACTGGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR CCA 90 bp | GATGGTGACACCTGCACGTTTAACCAAATGCCAGCACACCTAAGCTaGGTTTCCAGTCTGAACCGGCAGAAAAGGGATGTATTCGGTATT | + |
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Preference number: 1 (lower is better) Translates to: DGDTCTFNQMPAHLS*VSSLNRQKRDVFGI Trigger: AATACCGAATACATCCCTTTTCTGCCGGTTCAGACTGGAAACCCAGCTTAGGTGTGCTGGCATTTGGTTAAACGTGCAGGTGTCACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR GCA 90 bp | CACTTCGCATCATCTGCGTGGAGTAAATATTGTGATGGTGACACCTaGACGTTTAACCAAATGCCAGCACACCTAAGCTGGGTTTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: HFASSAWSKYCDGDT*TFNQMPAHLSWVSS Trigger: ACTGGAAACCCAGCTTAGGTGTGCTGGCATTTGGTTAAACGTGCAGGTGTCACCATCACAATATTTACTCCACGCAGATGATGCGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR CCA 90 bp | CGTTCTCTTGCTCAAGCGGGAAATAATCACTTCGCATCATCTGCGTaGAGTAAATATTGTGATGGTGACACCTGCACGTTTAACCAAATG | + |
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Preference number: 1 (lower is better) Translates to: RSLAQAGNNHFASSA*SKYCDGDTCTFNQM Trigger: CATTTGGTTAAACGTGCAGGTGTCACCATCACAATATTTACTCCACGCAGATGATGCGAAGTGATTATTTCCCGCTTGAGCAAGAGAACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR-3UTR CCA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTCTGAAGGTGACGCGCTaGGTCCCGGCGCAGCCCCGC | + |
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Preference number: 2 (lower is better) Translates to: SFYYHLTTDEPLSLISVCLKVTR*VPAQPR Trigger: GCGGGGCTGCGCCGGGACCCAGCGCGTCACCTTCAG...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR-3UTR CCA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTTCCCACCCCAGCTCCTaGGCTACAGACAGGAACTGG | + |
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Preference number: 2 (lower is better) Translates to: SFYYHLTTDEPLSLISVCSHPSS*ATDRNW Trigger: CCAGTTCCTGTCTGTAGCCCAGGAGCTGGGGTGGGA...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR-3UTR TCA 90 bp | CTTCTACTCTTTGTTCTGGATCTGCGGCGTTCTCTTGCTCAAGCGGGAAATAATGCTGGGTTTCCAGTCTaGACCGGCAGAAAAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: LLLFVLDLRRSLAQAGNNAGFPV*TGRKGM Trigger: CATCCCTTTTCTGCCGGTTCAGACTGGAAACCCAGC...ATTATTTCCCGCTTGAGCAAGAGAACGCCGCAGATCCAGAACAAAGAGTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR-3UTR TCA 90 bp | CTTCTACTCTTTGTTCTGGATCTGCGGCGTTCTCTTGCTCAAGCGGGAAATAATTTCCTGGTGCCAAGGTaGGAACGTAATCGCAAACCC | + |
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Preference number: 2 (lower is better) Translates to: LLLFVLDLRRSLAQAGNNFLVPR*ERNRKP Trigger: GGGTTTGCGATTACGTTCTCACCTTGGCACCAGGAA...ATTATTTCCCGCTTGAGCAAGAGAACGCCGCAGATCCAGAACAAAGAGTAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR-3UTR CCA 90 bp | GAAATAATCACTTCGCATCATCTGCGTGGAGTAAATATTGTGATGGTGACACCTGCTACAGACAGGAACTaGCAACACCGCTGTGGGCCG | + |
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Preference number: 2 (lower is better) Translates to: EIITSHHLRGVNIVMVTPATDRN*QHRCGP Trigger: CGGCCCACAGCGGTGTTGCCAGTTCCTGTCTGTAGC...AGGTGTCACCATCACAATATTTACTCCACGCAGATGATGCGAAGTGATTATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR-3UTR GCA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTAACTGTGATGGCAAATaGGTTTTGCGGGGGTTGCGC | + |
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Preference number: 2 (lower is better) Translates to: SFYYHLTTDEPLSLISVCNCDGK*VLRGLR Trigger: GCGCAACCCCCGCAAAACGCATTTGCCATCACAGTT...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000564844.1 ENST00000570189.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGATGGTGACACCTGCACGTTTAACCAAATGCCAGCACACCTAAGCTGGGTTATTCGGTATTCCTGGTaGCAAGGTGAGAACGTAATC | + |
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Preference number: 2 (lower is better) Translates to: CDGDTCTFNQMPAHLSWVIRYSW*QGENVI Trigger: GATTACGTTCTCACCTTGGCACCAGGAATACCGAAT...AACCCAGCTTAGGTGTGCTGGCATTTGGTTAAACGTGCAGGTGTCACCATCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR-3UTR CCA 90 bp | GAAATAATCACTTCGCATCATCTGCGTGGAGTAAATATTGTGATGGTGACACCTCCAGCACACCTAAGCTaGGTTTCCAGTCTGAACCGG | + |
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Preference number: 2 (lower is better) Translates to: EIITSHHLRGVNIVMVTPPAHLS*VSSLNR Trigger: CCGGTTCAGACTGGAAACCCAGCTTAGGTGTGCTGG...AGGTGTCACCATCACAATATTTACTCCACGCAGATGATGCGAAGTGATTATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR-3UTR GCA 90 bp | GAAATAATCACTTCGCATCATCTGCGTGGAGTAAATATTGTGATGGTGACACCTAACTGTGATGGCAAATaGGTTTTGCGGGGGTTGCGC | + |
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Preference number: 2 (lower is better) Translates to: EIITSHHLRGVNIVMVTPNCDGK*VLRGLR Trigger: GCGCAACCCCCGCAAAACGCATTTGCCATCACAGTT...AGGTGTCACCATCACAATATTTACTCCACGCAGATGATGCGAAGTGATTATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR-3UTR CCA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTTGTATTCGGTATTCCTaGTGCCAAGGTGAGAACGTA | + |
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Preference number: 2 (lower is better) Translates to: SFYYHLTTDEPLSLISVCCIRYS*CQGENV Trigger: TACGTTCTCACCTTGGCACCAGGAATACCGAATACA...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR CCA 72 bp | CCCTCGACGGGAAAACCAGCCCTGAAGGTGACGCGCTaGGTCCCGGCGCAGCCCCGCTTCAGAGCCGAACGG | + |
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Preference number: 3 (lower is better) Translates to: PSTGKPALKVTR*VPAQPRFRAER Trigger: CCGTTCGGCTCTGAAGCGGGGCTGCGCCGGGACCCAGCGCGTCACCTTCAGGGCTGGTTTTCCCGTCGAGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR-3UTR CAA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTTGCGTTTTGCGGGGGTaGCGCTTCACAACTCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: SFYYHLTTDEPLSLISVCCVLRG*RFTTQA Trigger: GGCCTGAGTTGTGAAGCGCAACCCCCGCAAAACGCA...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000564844.1 ENST00000570189.5 |
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| 3UTR CCA 72 bp | ACCTGCACGTTTAACCAAATGCCAGCACACCTAAGCTaGGTTTCCAGTCTGAACCGGCAGAAAAGGGATGTA | + |
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Preference number: 3 (lower is better) Translates to: TCTFNQMPAHLS*VSSLNRQKRDV Trigger: TACATCCCTTTTCTGCCGGTTCAGACTGGAAACCCAGCTTAGGTGTGCTGGCATTTGGTTAAACGTGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR GCA 72 bp | GAACCGGCAGAAAAGGGATGTATTCGGTATTCCTGGTaGCAAGGTGAGAACGTAATCGCAAACCCAAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: EPAEKGCIRYSW*QGENVIANPRE Trigger: TTCTCTTGGGTTTGCGATTACGTTCTCACCTTGGCACCAGGAATACCGAATACATCCCTTTTCTGCCGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR CCA 72 bp | TCTGAACCGGCAGAAAAGGGATGTATTCGGTATTCCTaGTGCCAAGGTGAGAACGTAATCGCAAACCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: SEPAEKGCIRYS*CQGENVIANPR Trigger: TCTTGGGTTTGCGATTACGTTCTCACCTTGGCACCAGGAATACCGAATACATCCCTTTTCTGCCGGTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR TCA 72 bp | AGAAAAGGGATGTATTCGGTATTCCTGGTGCCAAGGTaGGAACGTAATCGCAAACCCAAGAGAAGTCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: RKGMYSVFLVPR*ERNRKPKRSLP Trigger: TGGGAGACTTCTCTTGGGTTTGCGATTACGTTCTCACCTTGGCACCAGGAATACCGAATACATCCCTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR GCA 72 bp | TCATCTGCGTGGAGTAAATATTGTGATGGTGACACCTaGACGTTTAACCAAATGCCAGCACACCTAAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SSAWSKYCDGDT*TFNQMPAHLSW Trigger: CCAGCTTAGGTGTGCTGGCATTTGGTTAAACGTGCAGGTGTCACCATCACAATATTTACTCCACGCAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR CCA 72 bp | GCTCAAGCGGGAAATAATCACTTCGCATCATCTGCGTaGAGTAAATATTGTGATGGTGACACCTGCACGTTT | + |
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Preference number: 3 (lower is better) Translates to: AQAGNNHFASSA*SKYCDGDTCTF Trigger: AAACGTGCAGGTGTCACCATCACAATATTTACTCCACGCAGATGATGCGAAGTGATTATTTCCCGCTTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR CCA 90 bp | GCCTCCTCCCAGGCCTCCGAGAGGTCCGCAGGCCGCCCCGGCCCAGACCAGCCCTCCCACCCCAGCTCCTaGGCTACAGACAGGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: ASSQASERSAGRPGPDQPSHPSS*ATDRNW Trigger: CCAGTTCCTGTCTGTAGCCCAGGAGCTGGGGTGGGA...GGGCTGGTCTGGGCCGGGGCGGCCTGCGGACCTCTCGGAGGCCTGGGAGGAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR TCA 90 bp | GCCTCCTCCCAGGCCTCCGAGAGGTCCGCAGGCCGCCCCGGCCCAGACCAGCCCCGCTGTACTCCAGAGTaGCACTGGTACACTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ASSQASERSAGRPGPDQPRCTPE*HWYTAA Trigger: AGCAGCAGTGTACCAGTGTCACTCTGGAGTACAGCG...GGGCTGGTCTGGGCCGGGGCGGCCTGCGGACCTCTCGGAGGCCTGGGAGGAGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR TCA 90 bp | GCCTCCTCCCAGGCCTCCGAGAGGTCCGCAGGCCGCCCCGGCCCAGACCAGCCCGCTGGGTTTCCAGTCTaGACCGGCAGAAAAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: ASSQASERSAGRPGPDQPAGFPV*TGRKGM Trigger: CATCCCTTTTCTGCCGGTTCAGACTGGAAACCCAGC...GGGCTGGTCTGGGCCGGGGCGGCCTGCGGACCTCTCGGAGGCCTGGGAGGAGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR GCA 90 bp | GCCTCCTCCCAGGCCTCCGAGAGGTCCGCAGGCCGCCCCGGCCCAGACCAGCCCGTGTTTACTGAACGCTaGGGACATCTTTTCTATATA | + |
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Preference number: 4 (lower is better) Translates to: ASSQASERSAGRPGPDQPVFTER*GHLFYI Trigger: TATATAGAAAAGATGTCCGCAGCGTTCAGTAAACAC...GGGCTGGTCTGGGCCGGGGCGGCCTGCGGACCTCTCGGAGGCCTGGGAGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR TCA 90 bp | CCCCTCCTCTCGACCGAGGCACTGAGGTCTGTAAGAGGCACTCGCACCCGGGCGAGTGTCTGTGTTTACTaGACGCTGCGGACATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: PLLSTEALRSVRGTRTRASVCVY*TLRTSF Trigger: AAAAGATGTCCGCAGCGTTCAGTAAACACAGACACT...CGCCCGGGTGCGAGTGCCTCTTACAGACCTCAGTGCCTCGGTCGAGAGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR GCA 90 bp | TGTGATGGTGACACCTGCACGTTTAACCAAATGCCAGCACACCTAAGCTGGGTTTCTCCGACGGCATGGTaGAGGGATCTGGGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: CDGDTCTFNQMPAHLSWVSPTAW*RDLGGG Trigger: GCCGCCGCCCAGATCCCTGCACCATGCCGTCGGAGA...AACCCAGCTTAGGTGTGCTGGCATTTGGTTAAACGTGCAGGTGTCACCATCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR GCA 90 bp | CTTCTACTCTTTGTTCTGGATCTGCGGCGTTCTCTTGCTCAAGCGGGAAATAATCGGCGTCCCAGGCCCTaGCGCCCTCCACAGCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: LLLFVLDLRRSLAQAGNNRRPRP*RPPQLG Trigger: TCCGAGCTGTGGAGGGCGGCAGGGCCTGGGACGCCG...ATTATTTCCCGCTTGAGCAAGAGAACGCCGCAGATCCAGAACAAAGAGTAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR CCA 90 bp | CTTCTACTCTTTGTTCTGGATCTGCGGCGTTCTCTTGCTCAAGCGGGAAATAATCATGGTGCAGGGATCTaGGCGGCGGCGGCGGCGACG | + |
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Preference number: 4 (lower is better) Translates to: LLLFVLDLRRSLAQAGNNHGAGI*AAAAAT Trigger: CGTCGCCGCCGCCGCCGCCCAGATCCCTGCACCATG...ATTATTTCCCGCTTGAGCAAGAGAACGCCGCAGATCCAGAACAAAGAGTAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR CCA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTCATGGTGCAGGGATCTaGGCGGCGGCGGCGGCGACG | + |
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Preference number: 4 (lower is better) Translates to: SFYYHLTTDEPLSLISVCHGAGI*AAAAAT Trigger: CGTCGCCGCCGCCGCCGCCCAGATCCCTGCACCATG...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564844.1 ENST00000570189.5 |
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| CDS-3UTR GCA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTTCTCCGACGGCATGGTaGAGGGATCTGGGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SFYYHLTTDEPLSLISVCSPTAW*RDLGGG Trigger: GCCGCCGCCCAGATCCCTGCACCATGCCGTCGGAGA...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564844.1 ENST00000570189.5 |
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| CDS-3UTR CCA 90 bp | TGTGATGGTGACACCTGCACGTTTAACCAAATGCCAGCACACCTAAGCTGGGTTCCAGCACACCTAAGCTaGGTTTCCAGTCTGAACCGG | + |
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Preference number: 4 (lower is better) Translates to: CDGDTCTFNQMPAHLSWVPAHLS*VSSLNR Trigger: CCGGTTCAGACTGGAAACCCAGCTTAGGTGTGCTGG...AACCCAGCTTAGGTGTGCTGGCATTTGGTTAAACGTGCAGGTGTCACCATCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR CCA 90 bp | AAACGATGTTATGATGAAAGAAACGGGCTCTGCAGTCTAGCAAGTAATATAAAACATGGTGCAGGGATCTaGGCGGCGGCGGCGGCGACG | + |
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Preference number: 4 (lower is better) Translates to: KRCYDERNGLCSLASNIKHGAGI*AAAAAT Trigger: CGTCGCCGCCGCCGCCGCCCAGATCCCTGCACCATG...TTTTATATTACTTGCTAGACTGCAGAGCCCGTTTCTTTCATCATAACATCGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565788.1 |
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| CDS-3UTR CCA 90 bp | GAAATAATCACTTCGCATCATCTGCGTGGAGTAAATATTGTGATGGTGACACCTAGACGCATGCGGGGGTaGGGGGAGCAGGTGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: EIITSHHLRGVNIVMVTPRRMRG*GEQVTG Trigger: TCCTGTCACCTGCTCCCCCCACCCCCGCATGCGTCT...AGGTGTCACCATCACAATATTTACTCCACGCAGATGATGCGAAGTGATTATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR CCA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTGCTACAGACAGGAACTaGCAACACCGCTGTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SFYYHLTTDEPLSLISVCATDRN*QHRCGP Trigger: CGGCCCACAGCGGTGTTGCCAGTTCCTGTCTGTAGC...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR GCA 90 bp | TGTTATGATGAAAGAAACGGGCTCTGCAGTCTAGCAAGTAATATAAAACCTCAATCTCCGACGGCATGGTaGAGGGATCTGGGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: CYDERNGLCSLASNIKPQSPTAW*RDLGGG Trigger: GCCGCCGCCCAGATCCCTGCACCATGCCGTCGGAGA...TTGAGGTTTTATATTACTTGCTAGACTGCAGAGCCCGTTTCTTTCATCATAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565788.1 |
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| CDS-3UTR TCA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTTTCCTGGTGCCAAGGTaGGAACGTAATCGCAAACCC | + |
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Preference number: 4 (lower is better) Translates to: SFYYHLTTDEPLSLISVCFLVPR*ERNRKP Trigger: GGGTTTGCGATTACGTTCTCACCTTGGCACCAGGAA...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR CCA 90 bp | TGTGATGGTGACACCTGCACGTTTAACCAAATGCCAGCACACCTAAGCTGGGTTTTCTACTCTTTGTTCTaGATCTGCGGCGTTCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: CDGDTCTFNQMPAHLSWVFYSLF*ICGVLL Trigger: CAAGAGAACGCCGCAGATCCAGAACAAAGAGTAGAA...AACCCAGCTTAGGTGTGCTGGCATTTGGTTAAACGTGCAGGTGTCACCATCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR TCA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTCCACAGATGAGCCTCTaGGTCTCATTAGTGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SFYYHLTTDEPLSLISVCPQMSL*VSLVSV Trigger: CACAGACACTAATGAGACTCAGAGGCTCATCTGTGG...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564844.1 ENST00000570189.5 |
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| CDS-3UTR GCA 90 bp | CTTCTACTCTTTGTTCTGGATCTGCGGCGTTCTCTTGCTCAAGCGGGAAATAATTCTTTGTTCTGGATCTaGGGCGTTCTCTTGCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: LLLFVLDLRRSLAQAGNNSLFWI*GVLLLK Trigger: CTTGAGCAAGAGAACGCCGCAGATCCAGAACAAAGA...ATTATTTCCCGCTTGAGCAAGAGAACGCCGCAGATCCAGAACAAAGAGTAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR CCA 90 bp | CTTCTACTCTTTGTTCTGGATCTGCGGCGTTCTCTTGCTCAAGCGGGAAATAATTGTATTCGGTATTCCTaGTGCCAAGGTGAGAACGTA | + |
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Preference number: 4 (lower is better) Translates to: LLLFVLDLRRSLAQAGNNCIRYS*CQGENV Trigger: TACGTTCTCACCTTGGCACCAGGAATACCGAATACA...ATTATTTCCCGCTTGAGCAAGAGAACGCCGCAGATCCAGAACAAAGAGTAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| CDS-3UTR CCA 90 bp | TGTGATGGTGACACCTGCACGTTTAACCAAATGCCAGCACACCTAAGCTGGGTTTTCGCATCATCTGCGTaGAGTAAATATTGTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: CDGDTCTFNQMPAHLSWVFASSA*SKYCDG Trigger: ACCATCACAATATTTACTCCACGCAGATGATGCGAA...AACCCAGCTTAGGTGTGCTGGCATTTGGTTAAACGTGCAGGTGTCACCATCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564844.1 |
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| 3UTR CAA 72 bp | ATCTTCTACTCTTTGTTCTGGATCTGCGGCGTTCTCTaGCTCAAGCGGGAAATAATCACTTCGCATCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFYSLFWICGVL*LKREIITSHHL Trigger: CAGATGATGCGAAGTGATTATTTCCCGCTTGAGCAAGAGAACGCCGCAGATCCAGAACAAAGAGTAGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
||
| CDS-3UTR TCA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTAGTGTCTGTGTTTACTaGACGCTGCGGACATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFYYHLTTDEPLSLISVCSVCVY*TLRTSF Trigger: AAAAGATGTCCGCAGCGTTCAGTAAACACAGACACT...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564844.1 ENST00000570189.5 |
||
| CDS-3UTR TCA 90 bp | GAAATAATCACTTCGCATCATCTGCGTGGAGTAAATATTGTGATGGTGACACCTCCACAGATGAGCCTCTaGGTCTCATTAGTGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EIITSHHLRGVNIVMVTPPQMSL*VSLVSV Trigger: CACAGACACTAATGAGACTCAGAGGCTCATCTGTGG...AGGTGTCACCATCACAATATTTACTCCACGCAGATGATGCGAAGTGATTATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
||
| CDS-3UTR GCA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTTGTGATGGTGACACCTaGACGTTTAACCAAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFYYHLTTDEPLSLISVCCDGDT*TFNQMP Trigger: TGGCATTTGGTTAAACGTGCAGGTGTCACCATCACA...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
||
| CDS-3UTR GCA 90 bp | GAAATAATCACTTCGCATCATCTGCGTGGAGTAAATATTGTGATGGTGACACCTATTCGGTATTCCTGGTaGCAAGGTGAGAACGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: EIITSHHLRGVNIVMVTPIRYSW*QGENVI Trigger: GATTACGTTCTCACCTTGGCACCAGGAATACCGAAT...AGGTGTCACCATCACAATATTTACTCCACGCAGATGATGCGAAGTGATTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
||
| CDS-3UTR GCA 90 bp | TCGTTCTATTATCACCTGACCACAGATGAGCCTCTGAGTCTCATTAGTGTCTGTGTGTTTACTGAACGCTaGGGACATCTTTTCTATATA | + |
|
Preference number: 4 (lower is better) Translates to: SFYYHLTTDEPLSLISVCVFTER*GHLFYI Trigger: TATATAGAAAAGATGTCCGCAGCGTTCAGTAAACAC...ACAGACACTAATGAGACTCAGAGGCTCATCTGTGGTCAGGTGATAATAGAACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564844.1 ENST00000570189.5 |
||
| CDS-3UTR GCA 90 bp | TGTTATGATGAAAGAAACGGGCTCTGCAGTCTAGCAAGTAATATAAAACCTCAAGAAAGAAACGGGCTCTaGAGTCTAGCAAGTAATATA | + |
|
Preference number: 4 (lower is better) Translates to: CYDERNGLCSLASNIKPQERNGL*SLASNI Trigger: TATATTACTTGCTAGACTGCAGAGCCCGTTTCTTTC...TTGAGGTTTTATATTACTTGCTAGACTGCAGAGCCCGTTTCTTTCATCATAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565788.1 |
||
| CDS CCA 90 bp | CGCGCCGTCTCCGGGAGGCAGGGTCGCCGCTCGCCCGTGGAGCCCTaGCCCCCTCTGCGTGCAGGGGCGCGCGTGGTCCGTGGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RAVSGRQGRRSPVEP*PPLRAGARVVRGWL Trigger: AAGCCACCCACGGACCACGCGCGCCCCTGCACGCAGAGGGGGCCAGGGCTCCACGGGCGAGCGGCGACCCTGCCTCCCGGAGACGGCGCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 90 bp | CGTGCGCGATGGGCGAAACGCGCGCTCTGCGCATGCTCCCGGTCGTaGCCCAGCCCCGCCCAGCACCGCTGGGCGCCTGAGGCCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RARWAKRALCACSRS*PSPAQHRWAPEAPE Trigger: CTCAGGGGCCTCAGGCGCCCAGCGGTGCTGGGCGGGGCTGGGGCACGACCGGGAGCATGCGCAGAGCGCGCGTTTCGCCCATCGCGCACG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS TCA 90 bp | GGGGCGCGCGTGGTCCGTGGGTGGCTTCCGGGGAGTGGCCGCTGGTaGCCTCCGCCCGCGGTCACTCGACGCCCAGCCTTGGCGCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GARVVRGWLPGSGRW*PPPAVTRRPALARL Trigger: CAAACGCGCCAAGGCTGGGCGTCGAGTGACCGCGGGCGGAGGTCACCAGCGGCCACTCCCCGGAAGCCACCCACGGACCACGCGCGCCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 90 bp | CAGGTGTGTGCGCGTGCGCGATGGGCGAAACGCGCGCTCTGCGCATaGTCCCGGTCGTGCCCCAGCCCCGCCCAGCACCGCTGGGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QVCARARWAKRALCA*SRSCPSPAQHRWAP Trigger: AGGCGCCCAGCGGTGCTGGGCGGGGCTGGGGCACGACCGGGAGCATGCGCAGAGCGCGCGTTTCGCCCATCGCGCACGCGCACACACCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 90 bp | GCGGAGCAGGTGTGTGCGCGTGCGCGATGGGCGAAACGCGCGCTCTaGGCATGCTCCCGGTCGTGCCCCAGCCCCGCCCAGCACCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AEQVCARARWAKRAL*ACSRSCPSPAQHRW Trigger: CCAGCGGTGCTGGGCGGGGCTGGGGCACGACCGGGAGCATGCGCAGAGCGCGCGTTTCGCCCATCGCGCACGCGCACACACCTGCTCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 90 bp | GGCGGCGACGACGCGAGGGTCCCGGCGGCTCCCGGGGGCGGCGGCTaGTGCGGCGGCGAATCCGACTCTGGCGATAGCCACTTCCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGDDARVPAAPGGGG*CGGESDSGDSHFPC Trigger: ACAAGGGAAGTGGCTATCGCCAGAGTCGGATTCGCCGCCGCAGCAGCCGCCGCCCCCGGGAGCCGCCGGGACCCTCGCGTCGTCGCCGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 90 bp | GCGGCACGCAGCGTGGGGGCGGAGCAGGTGTGTGCGCGTGCGCGATaGGCGAAACGCGCGCTCTGCGCATGCTCCCGGTCGTGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AARSVGAEQVCARAR*AKRALCACSRSCPS Trigger: GCTGGGGCACGACCGGGAGCATGCGCAGAGCGCGCGTTTCGCCCATCGCGCACGCGCACACACCTGCTCCGCCCCCACGCTGCGTGCCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 90 bp | CGCCGCCATGACGGGCGTGGCGGAACCCAGCAGCGGCACGCAGCGTaGGGGCGGAGCAGGTGTGTGCGCGTGCGCGATGGGCGAAACGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRHDGRGGTQQRHAA*GRSRCVRVRDGRNA Trigger: CGCGTTTCGCCCATCGCGCACGCGCACACACCTGCTCCGCCCCCACGCTGCGTGCCGCTGCTGGGTTCCGCCACGCCCGTCATGGCGGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 90 bp | CCCAGCAGCGGCACGCAGCGTGGGGGCGGAGCAGGTGTGTGCGCGTaGGCGATGGGCGAAACGCGCGCTCTGCGCATGCTCCCGGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSSGTQRGGGAGVCA*AMGETRALRMLPVV Trigger: CACGACCGGGAGCATGCGCAGAGCGCGCGTTTCGCCCATCGCGCACGCGCACACACCTGCTCCGCCCCCACGCTGCGTGCCGCTGCTGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 90 bp | GCGGAACCCAGCAGCGGCACGCAGCGTGGGGGCGGAGCAGGTGTGTaGGCGTGCGCGATGGGCGAAACGCGCGCTCTGCGCATGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AEPSSGTQRGGGAGV*ACAMGETRALRMLP Trigger: CGGGAGCATGCGCAGAGCGCGCGTTTCGCCCATCGCGCACGCGCACACACCTGCTCCGCCCCCACGCTGCGTGCCGCTGCTGGGTTCCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 90 bp | TCTGCGTGCAGGGGCGCGCGTGGTCCGTGGGTGGCTTCCGGGGAGTaGCCGCTGGTGACCTCCGCCCGCGGTCACTCGACGCCCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SACRGARGPWVASGE*PLVTSARGHSTPSL Trigger: AAGGCTGGGCGTCGAGTGACCGCGGGCGGAGGTCACCAGCGGCCACTCCCCGGAAGCCACCCACGGACCACGCGCGCCCCTGCACGCAGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTCCCAGGCCTCCGAGAGGTCCGCAGGCCGCCCCGGCCCAGACCAGCCCTGCGTTTTGCGGGGGTaGCGCTTCACAACTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASSQASERSAGRPGPDQPCVLRG*RFTTQA Trigger: GGCCTGAGTTGTGAAGCGCAACCCCCGCAAAACGCA...GGGCTGGTCTGGGCCGGGGCGGCCTGCGGACCTCTCGGAGGCCTGGGAGGAGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000564844.1 |
||
| CDS TCA 90 bp | GATAGCCACTTCCCTTGTATCTCCTCAGCCCGCAGCCTGGTCAGGTaGCTCGCGACGCGTCACCGAGGGGCGGGGCCAGAGCCGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: DSHFPCISSARSLVR*LATRHRGAGPEPAG Trigger: CCCGGCCGGCTCTGGCCCCGCCCCTCGGTGACGCGTCGCGAGTCACCTGACCAGGCTGCGGGCTGAGGAGATACAAGGGAAGTGGCTATC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 90 bp | CCGCCCGCGGTCACTCGACGCCCAGCCTTGGCGCGTTTGCGCAACTaGTTTTGTCCCGAGCCTTCATTCTGGGCGCAGTCCCCTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPAVTRRPALARLRN*FCPEPSFWAQSPLP Trigger: TGGGAGAGGGGACTGCGCCCAGAATGAAGGCTCGGGACAAAAGCAGTTGCGCAAACGCGCCAAGGCTGGGCGTCGAGTGACCGCGGGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 90 bp | GGTGACCTCCGCCCGCGGTCACTCGACGCCCAGCCTTGGCGCGTTTaGGCAACTGCTTTTGTCCCGAGCCTTCATTCTGGGCGCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GDLRPRSLDAQPWRV*ATAFVPSLHSGRSP Trigger: GGGACTGCGCCCAGAATGAAGGCTCGGGACAAAAGCAGTTGCGCAAACGCGCCAAGGCTGGGCGTCGAGTGACCGCGGGCGGAGGTCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 90 bp | GTGGCCGCTGGTGACCTCCGCCCGCGGTCACTCGACGCCCAGCCTTaGCGCGTTTGCGCAACTGCTTTTGTCCCGAGCCTTCATTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAAGDLRPRSLDAQP*RVCATAFVPSLHSG Trigger: CCCAGAATGAAGGCTCGGGACAAAAGCAGTTGCGCAAACGCGCCAAGGCTGGGCGTCGAGTGACCGCGGGCGGAGGTCACCAGCGGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 90 bp | ACTCTGGCGATAGCCACTTCCCTTGTATCTCCTCAGCCCGCAGCCTaGTCAGGTGACTCGCGACGCGTCACCGAGGGGCGGGGCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLAIATSLVSPQPAA*SGDSRRVTEGRGQS Trigger: GCTCTGGCCCCGCCCCTCGGTGACGCGTCGCGAGTCACCTGACCAGGCTGCGGGCTGAGGAGATACAAGGGAAGTGGCTATCGCCAGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS TCA 90 bp | AGTGGATGCACTTATGCGGTGCTCTCCTCTGCGTACATTCATGACTaGAACCGAGGCCTGAGACTACCTACCGGGATTTTGGTTGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: SGCTYAVLSSAYIHD*NRGLRLPTGILVGC Trigger: GCATCCAACCAAAATCCCGGTAGGTAGTCTCAGGCCTCGGTTTCAGTCATGAATGTACGCAGAGGAGAGCACCGCATAAGTGCATCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564638.1 |
||
| CDS TCA 90 bp | GTCAAGTGGATGCACTTATGCGGTGCTCTCCTCTGCGTACATTCATaGCTGAAACCGAGGCCTGAGACTACCTACCGGGATTTTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VKWMHLCGALLCVHS*LKPRPETTYRDFGW Trigger: CCAACCAAAATCCCGGTAGGTAGTCTCAGGCCTCGGTTTCAGTCATGAATGTACGCAGAGGAGAGCACCGCATAAGTGCATCCACTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564638.1 |
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| CDS-3UTR CAA 90 bp | CTTCTACTCTTTGTTCTGGATCTGCGGCGTTCTCTTGCTCAAGCGGGAAATAATGACATCTTCTACTCTTaGTTCTGGATCTGCGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLFVLDLRRSLAQAGNNDIFYS*FWICGV Trigger: AACGCCGCAGATCCAGAACAAAGAGTAGAAGATGTC...ATTATTTCCCGCTTGAGCAAGAGAACGCCGCAGATCCAGAACAAAGAGTAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
||
| CDS-3UTR CAA 90 bp | GAAATAATCACTTCGCATCATCTGCGTGGAGTAAATATTGTGATGGTGACACCTATCTGCGGCGTTCTCTaGCTCAAGCGGGAAATAATC | + |
|
Preference number: 5 (lower is better) Translates to: EIITSHHLRGVNIVMVTPICGVL*LKREII Trigger: GATTATTTCCCGCTTGAGCAAGAGAACGCCGCAGAT...AGGTGTCACCATCACAATATTTACTCCACGCAGATGATGCGAAGTGATTATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564844.1 |
||
| CDS GCA 72 bp | TCGCCGCTCGCCCGTGGAGCCCTGGCCCCCTCTGCGTaGAGGGGCGCGCGTGGTCCGTGGGTGGCTTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPLARGALAPSA*RGARGPWVASG Trigger: CCCGGAAGCCACCCACGGACCACGCGCGCCCCTGCACGCAGAGGGGGCCAGGGCTCCACGGGCGAGCGGCGA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650688.1 |
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| CDS CCA 72 bp | TCCGGGAGGCAGGGTCGCCGCTCGCCCGTGGAGCCCTaGCCCCCTCTGCGTGCAGGGGCGCGCGTGGTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SGRQGRRSPVEP*PPLRAGARVVR Trigger: ACGGACCACGCGCGCCCCTGCACGCAGAGGGGGCCAGGGCTCCACGGGCGAGCGGCGACCCTGCCTCCCGGA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 72 bp | AGGGTCGCCGCTCGCCCGTGGAGCCCTGGCCCCCTCTaGGTGCAGGGGCGCGCGTGGTCCGTGGGTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RVAARPWSPGPL*VQGRAWSVGGF Trigger: GAAGCCACCCACGGACCACGCGCGCCCCTGCACGCAGAGGGGGCCAGGGCTCCACGGGCGAGCGGCGACCCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 72 bp | GCGCGTGCGCGATGGGCGAAACGCGCGCTCTGCGCATaGTCCCGGTCGTGCCCCAGCCCCGCCCAGCACCGC | + |
|
Preference number: 6 (lower is better) Translates to: ARARWAKRALCA*SRSCPSPAQHR Trigger: GCGGTGCTGGGCGGGGCTGGGGCACGACCGGGAGCATGCGCAGAGCGCGCGTTTCGCCCATCGCGCACGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 72 bp | AGGGGCGCGCGTGGTCCGTGGGTGGCTTCCGGGGAGTaGCCGCTGGTGACCTCCGCCCGCGGTCACTCGACG | + |
|
Preference number: 6 (lower is better) Translates to: RGARGPWVASGE*PLVTSARGHST Trigger: CGTCGAGTGACCGCGGGCGGAGGTCACCAGCGGCCACTCCCCGGAAGCCACCCACGGACCACGCGCGCCCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 72 bp | GACGGGCGTGGCGGAACCCAGCAGCGGCACGCAGCGTaGGGGCGGAGCAGGTGTGTGCGCGTGCGCGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: DGRGGTQQRHAA*GRSRCVRVRDG Trigger: CCCATCGCGCACGCGCACACACCTGCTCCGCCCCCACGCTGCGTGCCGCTGCTGGGTTCCGCCACGCCCGTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 72 bp | GTGTGTGCGCGTGCGCGATGGGCGAAACGCGCGCTCTaGGCATGCTCCCGGTCGTGCCCCAGCCCCGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VCARARWAKRAL*ACSRSCPSPAQ Trigger: CTGGGCGGGGCTGGGGCACGACCGGGAGCATGCGCAGAGCGCGCGTTTCGCCCATCGCGCACGCGCACACAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 72 bp | AGCAGCGGCACGCAGCGTGGGGGCGGAGCAGGTGTGTaGGCGTGCGCGATGGGCGAAACGCGCGCTCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSGTQRGGGAGV*ACAMGETRALR Trigger: GCGCAGAGCGCGCGTTTCGCCCATCGCGCACGCGCACACACCTGCTCCGCCCCCACGCTGCGTGCCGCTGCT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 72 bp | CGCAGTCCCCTCTCCCAGTCCCCCTGCCGCGGCGCCTaGAACTCTCCTGGTGGCGGCCGGCGCGGCACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RSPLSQSPCRGA*NSPGGGRRGTV Trigger: AACTGTGCCGCGCCGGCCGCCACCAGGAGAGTTCCAGGCGCCGCGGCAGGGGGACTGGGAGAGGGGACTGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS TCA 72 bp | GTGGTCCGTGGGTGGCTTCCGGGGAGTGGCCGCTGGTaGCCTCCGCCCGCGGTCACTCGACGCCCAGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VVRGWLPGSGRW*PPPAVTRRPAL Trigger: CAAGGCTGGGCGTCGAGTGACCGCGGGCGGAGGTCACCAGCGGCCACTCCCCGGAAGCCACCCACGGACCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 72 bp | AGCGTGGGGGCGGAGCAGGTGTGTGCGCGTGCGCGATaGGCGAAACGCGCGCTCTGCGCATGCTCCCGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SVGAEQVCARAR*AKRALCACSRS Trigger: CGACCGGGAGCATGCGCAGAGCGCGCGTTTCGCCCATCGCGCACGCGCACACACCTGCTCCGCCCCCACGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 72 bp | CTTCATTCTGGGCGCAGTCCCCTCTCCCAGTCCCCCTaGCGCGGCGCCTGGAACTCTCCTGGTGGCGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LHSGRSPLSQSP*RGAWNSPGGGR Trigger: CCGGCCGCCACCAGGAGAGTTCCAGGCGCCGCGGCAGGGGGACTGGGAGAGGGGACTGCGCCCAGAATGAAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS TCA 72 bp | TTCCCTTGTATCTCCTCAGCCCGCAGCCTGGTCAGGTaGCTCGCGACGCGTCACCGAGGGGCGGGGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FPCISSARSLVR*LATRHRGAGPE Trigger: CTCTGGCCCCGCCCCTCGGTGACGCGTCGCGAGTCACCTGACCAGGCTGCGGGCTGAGGAGATACAAGGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 72 bp | GGCGACCCCTATCTCCACAAAAGCCGCGGCGCGAAGTaGTCGCCGAGCAGCCTCGTTAGCGCAGTAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GDPYLHKSRGAK*SPSSLVSAVGS Trigger: GCTGCCTACTGCGCTAACGAGGCTGCTCGGCGACCACTTCGCGCCGCGGCTTTTGTGGAGATAGGGGTCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 72 bp | GGTGACCTCCGCCCGCGGTCACTCGACGCCCAGCCTTaGCGCGTTTGCGCAACTGCTTTTGTCCCGAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GDLRPRSLDAQP*RVCATAFVPSL Trigger: AAGGCTCGGGACAAAAGCAGTTGCGCAAACGCGCCAAGGCTGGGCGTCGAGTGACCGCGGGCGGAGGTCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 72 bp | GGCAAATCCGACCATCCTTTCCCCTCCAGAGAGACTTaGTGGTGCTGCCCGAGACGCCGGCACCCGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GKSDHPFPSRET*WCCPRRRHPGL Trigger: CAGCCCCGGGTGCCGGCGTCTCGGGCAGCACCACCAAGTCTCTCTGGAGGGGAAAGGATGGTCGGATTTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CAA 90 bp | CGCGGTCACTCGACGCCCAGCCTTGGCGCGTTTGCGCAACTGCTTTaGTCCCGAGCCTTCATTCTGGGCGCAGTCCCCTCTCCCAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RGHSTPSLGAFAQLL*SRAFILGAVPSPSP Trigger: GGGACTGGGAGAGGGGACTGCGCCCAGAATGAAGGCTCGGGACAAAAGCAGTTGCGCAAACGCGCCAAGGCTGGGCGTCGAGTGACCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 72 bp | CGCCCGCGGTCACTCGACGCCCAGCCTTGGCGCGTTTaGGCAACTGCTTTTGTCCCGAGCCTTCATTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPRSLDAQPWRV*ATAFVPSLHSG Trigger: CCCAGAATGAAGGCTCGGGACAAAAGCAGTTGCGCAAACGCGCCAAGGCTGGGCGTCGAGTGACCGCGGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CCA 72 bp | ATAGCCACTTCCCTTGTATCTCCTCAGCCCGCAGCCTaGTCAGGTGACTCGCGACGCGTCACCGAGGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: IATSLVSPQPAA*SGDSRRVTEGR Trigger: CCGCCCCTCGGTGACGCGTCGCGAGTCACCTGACCAGGCTGCGGGCTGAGGAGATACAAGGGAAGTGGCTAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CAA 72 bp | CCGCCCGCGGTCACTCGACGCCCAGCCTTGGCGCGTTaGCGCAACTGCTTTTGTCCCGAGCCTTCATTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PPAVTRRPALAR*RNCFCPEPSFW Trigger: CCAGAATGAAGGCTCGGGACAAAAGCAGTTGCGCAAACGCGCCAAGGCTGGGCGTCGAGTGACCGCGGGCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS GCA 72 bp | GTCACTCGACGCCCAGCCTTGGCGCGTTTGCGCAACTaGTTTTGTCCCGAGCCTTCATTCTGGGCGCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VTRRPALARLRN*FCPEPSFWAQS Trigger: GGACTGCGCCCAGAATGAAGGCTCGGGACAAAAGCAGTTGCGCAAACGCGCCAAGGCTGGGCGTCGAGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650688.1 |
||
| CDS CAA 72 bp | TCGACGCCCAGCCTTGGCGCGTTTGCGCAACTGCTTTaGTCCCGAGCCTTCATTCTGGGCGCAGTCCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: STPSLGAFAQLL*SRAFILGAVPS Trigger: AGAGGGGACTGCGCCCAGAATGAAGGCTCGGGACAAAAGCAGTTGCGCAAACGCGCCAAGGCTGGGCGTCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650688.1 |
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| CDS CAA 90 bp | TCTGAAGGTCGTGAGTTCGAGCCTCACACGGGGCAGTCTAACGTTTaGCACTCGGCATCACCACTTTCTTTTCTCATGCCCGTCACGGGC | + |
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Preference number: 6 (lower is better) Translates to: SEGREFEPHTGQSNV*HSASPLSFLMPVTG Trigger: GCCCGTGACGGGCATGAGAAAAGAAAGTGGTGATGCCGAGTGCAAAACGTTAGACTGCCCCGTGTGAGGCTCGAACTCACGACCTTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
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| CDS CAA 72 bp | CGTGAGTTCGAGCCTCACACGGGGCAGTCTAACGTTTaGCACTCGGCATCACCACTTTCTTTTCTCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: REFEPHTGQSNV*HSASPLSFLMP Trigger: GGGCATGAGAAAAGAAAGTGGTGATGCCGAGTGCAAAACGTTAGACTGCCCCGTGTGAGGCTCGAACTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650688.1 |
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| CDS TCA 72 bp | ATGCACTTATGCGGTGCTCTCCTCTGCGTACATTCATaGCTGAAACCGAGGCCTGAGACTACCTACCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: MHLCGALLCVHS*LKPRPETTYRD Trigger: ATCCCGGTAGGTAGTCTCAGGCCTCGGTTTCAGTCATGAATGTACGCAGAGGAGAGCACCGCATAAGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564638.1 |
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| CDS TCA 72 bp | ACTTATGCGGTGCTCTCCTCTGCGTACATTCATGACTaGAACCGAGGCCTGAGACTACCTACCGGGATTTTG | + |
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Preference number: 6 (lower is better) Translates to: TYAVLSSAYIHD*NRGLRLPTGIL Trigger: CAAAATCCCGGTAGGTAGTCTCAGGCCTCGGTTTCAGTCATGAATGTACGCAGAGGAGAGCACCGCATAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564638.1 |
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| CDS GCA 72 bp | CCTGTAAAAACCCGTCAAGTGGATGCACTTATGCGGTaGTCTCCTCTGCGTACATTCATGACTGAAACCGAG | + |
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Preference number: 6 (lower is better) Translates to: PVKTRQVDALMR*SPLRTFMTETE Trigger: CTCGGTTTCAGTCATGAATGTACGCAGAGGAGAGCACCGCATAAGTGCATCCACTTGACGGGTTTTTACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564638.1 |
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| CDS GCA 72 bp | CTGTCTGGTGATTCCTGTAAAAACCCGTCAAGTGGATaGACTTATGCGGTGCTCTCCTCTGCGTACATTCAT | + |
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Preference number: 6 (lower is better) Translates to: LSGDSCKNPSSG*TYAVLSSAYIH Trigger: ATGAATGTACGCAGAGGAGAGCACCGCATAAGTGCATCCACTTGACGGGTTTTTACAGGAATCACCAGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564638.1 |
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