Pregenerated sensors for MAP1LC3A (Homo sapiens)
Ensembl gene IDs: ENSG00000101460Ensembl transcript IDs: ENST00000360668.8, ENST00000374837.7, ENST00000397709.1, ENST00000476428.1
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTaGGCAGGGCCTGACCGGGGCCGCCCGACTCCCAGGCCGAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: AHHGRGSSVQEPGAL*AGPDRGRPTPRPSP Trigger: GGGGCTCGGCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAACCAGGAGCTCTCTaGGCAGGGCCTGACCGGGGC | + |
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Preference number: 2 (lower is better) Translates to: CRGTMTTDPYTTWRPRGGEPGAL*AGPDRG Trigger: GCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTC...CCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGACCAGTCTTTCAGGGGTaGGCAGGTCCAGGCGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: QRDNDHRSIHHVETEGRGPVFQG*AGPGGG Trigger: CCCACCGCCTGGACCTGCCCACCCCTGAAAGACTGG...TCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGCCTGAGCAATCTTTATTCTGCAGAGGGACAATGACCACAGATCCATACTCTCTGGGCAGGGCCTaGCCGGGGCCGCCCGACTCC | + |
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Preference number: 2 (lower is better) Translates to: GRPEQSLFCRGTMTTDPYSLGRA*PGPPDS Trigger: GGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGA...GTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTCAGGCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| 3UTR CCA 72 bp | GGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTaGGCAGGGCCTGACCGGGGCCGCCCGACTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GRGSSVQEPGAL*AGPDRGRPTPR Trigger: CCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | CAGGAACCAGGAGCTCTCTGGGCAGGGCCTGACCGGGGCCGCCCGACTCCCAGGGAACCAGGAGCTCTCTaGGCAGGGCCTGACCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QEPGALWAGPDRGRPTPREPGAL*AGPDRG Trigger: GCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTC...CCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | CAGGAACCAGGAGCTCTCTGGGCAGGGCCTGACCGGGGCCGCCCGACTCCCAGGCCAGTCTTTCAGGGGTaGGCAGGTCCAGGCGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: QEPGALWAGPDRGRPTPRPVFQG*AGPGGG Trigger: CCCACCGCCTGGACCTGCCCACCCCTGAAAGACTGG...CCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR GCA 90 bp | AGGAACCAGGAGCTCTCTGGGCAGGGCCTGACCGGGGCCGCCCGACTCCCAGGCAGCAGGAAGAAGGCCTaGGTGGGGTTCAGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RNQELSGQGLTGAARLPGSRKKA*VGFSCR Trigger: CCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCT...GCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR TCA 90 bp | CCCCCATCCCACCAGCCAGCACCCAGAGGGACAACCCTAACACGACCGGCCCAGAGCTCCGCCGCTGCTTaGAAGGCCGGTCTGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: PPSHQPAPRGTTLTRPAQSSAAA*KAGLRA Trigger: TGCCCTCAGACCGGCCTTTCAAGCAGCGGCGGAGCT...CTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000360668.8 |
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| CDS-3UTR CCA 90 bp | GGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCACGCAGGCCGGGGCTCTaGGGCGCGGGGATGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GTMTTDPYTTWRPRGGEPRRPGL*GAGMCL Trigger: CAGACACATCCCCGCGCCCCAGAGCCCCGGCCTGCG...TGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | CCCCCATCCCACCAGCCAGCACCCAGAGGGACAACCCTAACACGACCGGCCCAGCCAGTCTTTCAGGGGTaGGCAGGTCCAGGCGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PPSHQPAPRGTTLTRPAQPVFQG*AGPGGG Trigger: CCCACCGCCTGGACCTGCCCACCCCTGAAAGACTGG...CTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR GCA 90 bp | AGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCGCGCGGGGATGTGTCTaGGGTTTGGGGGCTCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: RDNDHRSIHHVETEGRGAARGCV*GLGAPG Trigger: CCCCGGAGCCCCCAAACCGCAGACACATCCCCGCGC...GGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | GCCCAGCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGGGATGTGTCTGCGGTTTaGGGGCTCCGGGGGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: AQPTTVEAAQFRNQELSGDVSAV*GLRGLR Trigger: GCGGAGCCCCCGGAGCCCCCAAACCGCAGACACATC...CCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000360668.8 |
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| CDS-3UTR TCA 90 bp | CTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGCTTGAAAGGCCGGTCTaGGGGCATCGCGCGGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LQRDNDHRSIHHVETEGRLERPV*GHRAGP Trigger: CGGGCCCGCGCGATGCCCTCAGACCGGCCTTTCAAG...CCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | CCAGCACCCAGAGGGACAACCCTAACACGACCGGCCCAGGATCCACCCAGGGGCAGCAGGAAGAAGGCCTaGGTGGGGTTCAGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PAPRGTTLTRPAQDPPRGSRKKA*VGFSCR Trigger: CCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCT...GCCCCTGGGTGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR GCA 90 bp | CAGGAACCAGGAGCTCTCTGGGCAGGGCCTGACCGGGGCCGCCCGACTCCCAGGGGCTGGGTCCACAGCTaGTTTTCCACATGGAGAACT | + |
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Preference number: 4 (lower is better) Translates to: QEPGALWAGPDRGRPTPRGWVHS*FSTWRT Trigger: AGTTCTCCATGTGGAAAAGCAGCTGTGGACCCAGCC...CCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS-3UTR GCA 90 bp | GCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGGCAGGGGCGAAGCTCCGCCGCTaGTTGAAAGGCCGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: AHHGRGSSVQEPGALWAGAKLRR*LKGRSE Trigger: CTCAGACCGGCCTTTCAAGCAGCGGCGGAGCTTCGC...CCCTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360668.8 |
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| CDS-3UTR GCA 90 bp | GGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCATGCGTGGGGTTCAGCTaGAGGCGGCGCCGGATGATC | + |
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Preference number: 4 (lower is better) Translates to: GTMTTDPYTTWRPRGGEPCVGFS*RRRRMI Trigger: GATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCA...TGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | CTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGATGTGTCTGCGGTTTaGGGGCTCCGGGGGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: LQRDNDHRSIHHVETEGRDVSAV*GLRGLR Trigger: GCGGAGCCCCCGGAGCCCCCAAACCGCAGACACATC...CCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | CTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGTGCGTGGGGTTCAGCTaGAGGCGGCGCCGGATGATC | + |
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Preference number: 4 (lower is better) Translates to: LQRDNDHRSIHHVETEGRCVGFS*RRRRMI Trigger: GATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCA...CCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | CAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGATGCGTGGGGTTCAGCTaGAGGCGGCGCCGGATGATC | + |
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Preference number: 4 (lower is better) Translates to: QRDNDHRSIHHVETEGRGCVGFS*RRRRMI Trigger: GATCATCCGGCGCCGCCTGCAGCTGAACCCCACGCA...TCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | TGCCCAGCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGGATCCATACACCACGTaGAGACCGAGGGGCGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: CPAHHGRGSSVQEPGALWDPYTT*RPRGGE Trigger: CTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATC...CCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | AGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCGATCCATACACCACGTaGAGACCGAGGGGCGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RDNDHRSIHHVETEGRGADPYTT*RPRGGE Trigger: CTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATC...GGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR TCA 90 bp | TTATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGTCTCTGGGCAGGGCCTaGCCGGGGCCGCCCGACTCC | + |
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Preference number: 4 (lower is better) Translates to: LFCRGTMTTDPYTTWRPRSLGRA*PGPPDS Trigger: GGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGA...CCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | CTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGATCCATACACCACGTaGAGACCGAGGGGCGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LQRDNDHRSIHHVETEGRDPYTT*RPRGGE Trigger: CTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATC...CCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | TCCCACCAGCCAGCACCCAGAGGGACAACCCTAACACGACCGGCCCAGGATCCACTTACAGCGGTCGGCTaGGTCCACAGCTGCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SHQPAPRGTTLTRPAQDPLTAVG*VHSCFS Trigger: GGAAAAGCAGCTGTGGACCCAGCCGACCGCTGTAAG...TGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS-3UTR TCA 90 bp | TTTATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGTCTCTGGGCAGGGCCTaGCCGGGGCCGCCCGACTCC | + |
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Preference number: 4 (lower is better) Translates to: FILQRDNDHRSIHHVETESLGRA*PGPPDS Trigger: GGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGA...CTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR TCA 90 bp | GCCCAGCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGGTGTCAGAACTACCTCTaGGGTGGAGGGTCAGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: AQPTTVEAAQFRNQELSGCQNYL*GGGSVS Trigger: GCTGACTGACCCTCCACCTCAGAGGTAGTTCTGACA...CCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS-3UTR GCA 90 bp | CAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAAGCAGGAAGAAGGCCTaGGTGGGGTTCAGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QRDNDHRSIHHVETEGRGSRKKA*VGFSCR Trigger: CCTGCAGCTGAACCCCACGCAGGCCTTCTTCCTGCT...TCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | AGCACCCAGAGGGACAACCCTAACACGACCGGCCCAGGATCCACCCAGGGGCAGTGGACACACTCACCATaGTGTGCTGGTTCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: STQRDNPNTTGPGSTQGQWTHSP*CAGSPA Trigger: TGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCA...CTGCCCCTGGGTGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR GCA 90 bp | GGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCATGCACCTGGCTTCCATaGAGTCAGGAGTGGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GTMTTDPYTTWRPRGGEPCTWLP*SQEWQV Trigger: CACCTGCCACTCCTGACTGCATGGAAGCCAGGTGCA...TGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | TTATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGCGCAGGCCGGGGCTCTaGGGCGCGGGGATGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LFCRGTMTTDPYTTWRPRRRPGL*GAGMCL Trigger: CAGACACATCCCCGCGCCCCAGAGCCCCGGCCTGCG...CCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | AGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCTGTCCGCGATGGGCGTaGACACACTCACCATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RDNDHRSIHHVETEGRGACPRWA*THSPCC Trigger: ACAGCATGGTGAGTGTGTCCACGCCCATCGCGGACA...GGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | TGCCCAGCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGTGTCCGCGATGGGCGTaGACACACTCACCATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: CPAHHGRGSSVQEPGALWCPRWA*THSPCC Trigger: ACAGCATGGTGAGTGTGTCCACGCCCATCGCGGACA...CCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | CAGCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGGCAGCGTAGATGTCCGCGATaGGCGTGGACACACTCACCA | + |
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Preference number: 4 (lower is better) Translates to: QPTTVEAAQFRNQELSGQRRCPR*AWTHSP Trigger: TGGTGAGTGTGTCCACGCCCATCGCGGACATCTACG...CTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | AGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCCGTAGATGTCCGCGATaGGCGTGGACACACTCACCA | + |
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Preference number: 4 (lower is better) Translates to: RDNDHRSIHHVETEGRGARRCPR*AWTHSP Trigger: TGGTGAGTGTGTCCACGCCCATCGCGGACATCTACG...GGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | AGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCACAGGCAGGGGCTGCTaGCTCAGAAGCCGAAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: RDNDHRSIHHVETEGRGATGRGC*LRSRRF Trigger: AAACCTTCGGCTTCTGAGCCAGCAGCCCCTGCCTGT...GGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | TTATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGCGCGGGGATGTGTCTaGGGTTTGGGGGCTCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: LFCRGTMTTDPYTTWRPRARGCV*GLGAPG Trigger: CCCCGGAGCCCCCAAACCGCAGACACATCCCCGCGC...CCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | CAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGATGCTGGTCGCGGATCTaGTGTACCTCCTTACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: QRDNDHRSIHHVETEGRGCWSRI*CTSLQR Trigger: CCGCTGTAAGGAGGTACAGCAGATCCGCGACCAGCA...TCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | TGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGGGATTTTGCTGGGGTaGTGGTCGCGGATCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: CRGTMTTDPYTTWRPRGGGILLG*WSRICC Trigger: ACAGCAGATCCGCGACCAGCACCCCAGCAAAATCCC...CCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | CAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGGGATTTTGCTGGGGTaGTGGTCGCGGATCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QRDNDHRSIHHVETEGRGGILLG*WSRICC Trigger: ACAGCAGATCCGCGACCAGCACCCCAGCAAAATCCC...TCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | GACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCAGGCCGGGACCAAAAACTTaGTCTTGTCCAGGACGGGCA | + |
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Preference number: 4 (lower is better) Translates to: DNDHRSIHHVETEGRGARPGPKT*SCPGRA Trigger: TGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGG...CCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | TCCCACCAGCCAGCACCCAGAGGGACAACCCTAACACGACCGGCCCAGGATCCAGCAACTCGGAAGCCATaGAGTCCCCTCCTCAAAATC | + |
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Preference number: 4 (lower is better) Translates to: SHQPAPRGTTLTRPAQDPATRKP*SPLLKI Trigger: GATTTTGAGGAGGGGACTCCATGGCTTCCGAGTTGC...TGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | GCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGGCAGGGGAACTACCTCTGAGGTaGAGGGTCAGTCAGCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: AHHGRGSSVQEPGALWAGELPLR*RVSQQL Trigger: GAGTTGCTGACTGACCCTCCACCTCAGAGGTAGTTC...CCCTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS-3UTR TCA 90 bp | TTTATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGCTTGAAAGGCCGGTCTaGGGGCATCGCGCGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FILQRDNDHRSIHHVETELERPV*GHRAGP Trigger: CGGGCCCGCGCGATGCCCTCAGACCGGCCTTTCAAG...CTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS-3UTR TCA 90 bp | CAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGACCTTGTAGCGCTCGATaGTCACCGGGATTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRDNDHRSIHHVETEGRGPCSAR*SPGFCW Trigger: CCAGCAAAATCCCGGTGATCATCGAGCGCTACAAGG...TCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR TCA 90 bp | AGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCCCAACTCGCTCATGTTaGCATGGTCCGGGACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDNDHRSIHHVETEGRGAPTRSC*HGPGPK Trigger: TTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGG...GGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR TCA 90 bp | GCCCAGCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGGTCTGCAGAGGGACAATaGCCACAGATCCATACACCA | + |
|
Preference number: 4 (lower is better) Translates to: AQPTTVEAAQFRNQELSGSAEGQ*PQIHTP Trigger: TGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGA...CCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | GACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCAGGCTTTCTCCTTGCACCTaGCTTCCATGCAGTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DNDHRSIHHVETEGRGARLSPCT*LPCSQE Trigger: CTCCTGACTGCATGGAAGCCAGGTGCAAGGAGAAAG...CCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS-3UTR TCA 90 bp | CAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGACCAACTCGCTCATGTTaGCATGGTCCGGGACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRDNDHRSIHHVETEGRGPTRSC*HGPGPK Trigger: TTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGG...TCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR TCA 90 bp | GACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCAGGTCTGCAGAGGGACAATaGCCACAGATCCATACACCA | + |
|
Preference number: 4 (lower is better) Translates to: DNDHRSIHHVETEGRGARSAEGQ*PQIHTP Trigger: TGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGA...CCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR TCA 90 bp | AGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCTCTGCAGAGGGACAATaGCCACAGATCCATACACCA | + |
|
Preference number: 4 (lower is better) Translates to: RDNDHRSIHHVETEGRGASAEGQ*PQIHTP Trigger: TGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGA...GGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
||
| CDS-3UTR GCA 90 bp | TTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGATTTTGCTGGGGTaGTGGTCGCGGATCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FCRGTMTTDPYTTWRPRGGILLG*WSRICC Trigger: ACAGCAGATCCGCGACCAGCACCCCAGCAAAATCCC...GCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | GCCCAGCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGGTCGCTCATGTTGACATaGTCCGGGACCAAAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQPTTVEAAQFRNQELSGSLMLT*SGTKNL Trigger: CAAGTTTTTGGTCCCGGACCATGTCAACATGAGCGA...CCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | GGCAGGCCTGAGCAATCTTTATTCTGCAGAGGGACAATGACCACAGATCCATACGAACCAGGAGCTCTCTaGGCAGGGCCTGACCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRPEQSLFCRGTMTTDPYEPGAL*AGPDRG Trigger: GCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTC...GTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTCAGGCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR TCA 90 bp | GGCAGGCCTGAGCAATCTTTATTCTGCAGAGGGACAATGACCACAGATCCATACAGCTCCGCCGCTGCTTaGAAGGCCGGTCTGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRPEQSLFCRGTMTTDPYSSAAA*KAGLRA Trigger: TGCCCTCAGACCGGCCTTTCAAGCAGCGGCGGAGCT...GTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTCAGGCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS-3UTR TCA 90 bp | TCCCACCAGCCAGCACCCAGAGGGACAACCCTAACACGACCGGCCCAGGATCCACTTCATCTGCAAAACTaGGACAGTGTCAGAACTACC | + |
|
Preference number: 4 (lower is better) Translates to: SHQPAPRGTTLTRPAQDPLHLQN*DSVRTT Trigger: GGTAGTTCTGACACTGTCTCAGTTTTGCAGATGAAG...TGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374837.7 |
||
| CDS-3UTR GCA 90 bp | AGCACCCAGAGGGACAACCCTAACACGACCGGCCCAGGATCCACCCAGGGGCAGGAGCAATCTTTATTCTaGAGAGGGACAATGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: STQRDNPNTTGPGSTQGQEQSLF*RGTMTT Trigger: TGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTC...CTGCCCCTGGGTGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR GCA 90 bp | GCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGGCAGGGAAAATCCTTTCTCCTTaGACCTGGCTTCCATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AHHGRGSSVQEPGALWAGKILSP*TWLPCS Trigger: ACTGCATGGAAGCCAGGTGCAAGGAGAAAGGATTTT...CCCTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | TGCCCAGCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGTCGCTCATGTTGACATaGTCCGGGACCAAAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CPAHHGRGSSVQEPGALWSLMLT*SGTKNL Trigger: CAAGTTTTTGGTCCCGGACCATGTCAACATGAGCGA...CCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | ATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGTAGATGTCCGCGATaGGCGTGGACACACTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ILQRDNDHRSIHHVETEGRRCPR*AWTHSP Trigger: TGGTGAGTGTGTCCACGCCCATCGCGGACATCTACG...CCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | TTTATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGCCAGTCTTTCAGGGGTaGGCAGGTCCAGGCGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FILQRDNDHRSIHHVETEPVFQG*AGPGGG Trigger: CCCACCGCCTGGACCTGCCCACCCCTGAAAGACTGG...CTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | GGCAGGCCTGAGCAATCTTTATTCTGCAGAGGGACAATGACCACAGATCCATACGCGAAGCTCCGCCGCTaGTTGAAAGGCCGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRPEQSLFCRGTMTTDPYAKLRR*LKGRSE Trigger: CTCAGACCGGCCTTTCAAGCAGCGGCGGAGCTTCGC...GTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTCAGGCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | TTTATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGCAGACAGGCAGGGGCTaGTGGCTCAGAAGCCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FILQRDNDHRSIHHVETEQTGRG*WLRSRR Trigger: CCTTCGGCTTCTGAGCCAGCAGCCCCTGCCTGTCTG...CTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | ATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGTGGACACACTCACCATaGTGTGCTGGTTCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILQRDNDHRSIHHVETEGWTHSP*CAGSPA Trigger: TGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCA...CCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | CTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGAGCAATCTTTATTCTaGAGAGGGACAATGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: LQRDNDHRSIHHVETEGREQSLF*RGTMTT Trigger: TGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTC...CCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | TTATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGATTTTGCTGGGGTGCTaGTCGCGGATCTGCTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LFCRGTMTTDPYTTWRPRILLGC*SRICCT Trigger: GGTACAGCAGATCCGCGACCAGCACCCCAGCAAAAT...CCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | GGCAGGCCTGAGCAATCTTTATTCTGCAGAGGGACAATGACCACAGATCCATACCCGGGACCAAAAACTTaGTCTTGTCCAGGACGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRPEQSLFCRGTMTTDPYPGPKT*SCPGRA Trigger: TGCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGG...GTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTCAGGCCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CCA 90 bp | CAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAAGCTGCTTTTCCACATaGAGAACTGAAGAATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QRDNDHRSIHHVETEGRGSCFST*RTEESH Trigger: ATGAGATTCTTCAGTTCTCCATGTGGAAAAGCAGCT...TCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS-3UTR TCA 90 bp | GGCAGGCCTGAGCAATCTTTATTCTGCAGAGGGACAATGACCACAGATCCATACCCAACTCGCTCATGTTaGCATGGTCCGGGACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRPEQSLFCRGTMTTDPYPTRSC*HGPGPK Trigger: TTTTGGTCCCGGACCATGTCAACATGAGCGAGTTGG...GTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTCAGGCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | GGCAGGCCTGAGCAATCTTTATTCTGCAGAGGGACAATGACCACAGATCCATACTGGACACACTCACCATaGTGTGCTGGTTCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRPEQSLFCRGTMTTDPYWTHSP*CAGSPA Trigger: TGCTGGTGAACCAGCACAGCATGGTGAGTGTGTCCA...GTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTCAGGCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | ATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGGAGCAATCTTTATTCTaGAGAGGGACAATGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: ILQRDNDHRSIHHVETEGEQSLF*RGTMTT Trigger: TGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTC...CCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR GCA 90 bp | TTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCAATCTCATCTTCATCTaGAAAACTGAGACAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FCRGTMTTDPYTTWRPRGNLIFI*KTETVS Trigger: TGACACTGTCTCAGTTTTGCAGATGAAGATGAGATT...GCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS-3UTR CCA 90 bp | TTTATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGTCGCTCATGTTGACATaGTCCGGGACCAAAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FILQRDNDHRSIHHVETESLMLT*SGTKNL Trigger: CAAGTTTTTGGTCCCGGACCATGTCAACATGAGCGA...CTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CAA 90 bp | AGGAACCAGGAGCTCTCTGGGCAGGGCCTGACCGGGGCCGCCCGACTCCCAGGCCGGCGCCGGATGATCTaGACCAACTCGCTCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RNQELSGQGLTGAARLPGRRRMI*TNSLML Trigger: CAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCG...GCCTGGGAGTCGGGCGGCCCCGGTCAGGCCCTGCCCAGAGAGCTCCTGGTTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR CAA 90 bp | TGCCCAGCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGAAGCTCCGCCGCTGCTaGAAAGGCCGGTCTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CPAHHGRGSSVQEPGALWKLRRC*KGRSEG Trigger: GCCCTCAGACCGGCCTTTCAAGCAGCGGCGGAGCTT...CCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGCTGGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360668.8 |
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| CDS-3UTR CAA 90 bp | GCCCACCACGGTAGAGGCAGCTCAGTTCAGGAACCAGGAGCTCTCTGGGCAGGGATGATCACCGGGATTTaGCTGGGGTGCTGGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AHHGRGSSVQEPGALWAGMITGI*LGCWSR Trigger: CCGCGACCAGCACCCCAGCAAAATCCCGGTGATCAT...CCCTGCCCAGAGAGCTCCTGGTTCCTGAACTGAGCTGCCTCTACCGTGGTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR CAA 90 bp | CCAGCACCCAGAGGGACAACCCTAACACGACCGGCCCAGGATCCACCCAGGGGCACCAAAAACTTGGTCTaGTCCAGGACGGGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PAPRGTTLTRPAQDPPRGTKNLV*SRTGSC Trigger: GCAGCTGCCCGTCCTGGACAAGACCAAGTTTTTGGT...GCCCCTGGGTGGATCCTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
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| CDS-3UTR CAA 90 bp | CCCCCATCCCACCAGCCAGCACCCAGAGGGACAACCCTAACACGACCGGCCCAGACCAACTCGCTCATGTaGACATGGTCCGGGACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPSHQPAPRGTTLTRPAQTNSLM*TWSGTK Trigger: TTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGT...CTGGGCCGGTCGTGTTAGGGTTGTCCCTCTGGGTGCTGGCTGGTGGGATGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000374837.7 |
||
| CDS-3UTR CAA 90 bp | GACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCAGGTCCGGGACCAAAAACTaGGTCTTGTCCAGGACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DNDHRSIHHVETEGRGARSGTKN*VLSRTG Trigger: GCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGA...CCTGGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS-3UTR CAA 90 bp | ATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGAAGCTCCGCCGCTGCTaGAAAGGCCGGTCTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILQRDNDHRSIHHVETEGKLRRC*KGRSEG Trigger: GCCCTCAGACCGGCCTTTCAAGCAGCGGCGGAGCTT...CCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
||
| CDS-3UTR CAA 90 bp | CTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGTCCGGGACCAAAAACTaGGTCTTGTCCAGGACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQRDNDHRSIHHVETEGRSGTKN*VLSRTG Trigger: GCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGA...CCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGACGGCGCCGGATGATCTaGACCAACTCGCTCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QRDNDHRSIHHVETEGRGRRRMI*TNSLML Trigger: CAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCG...TCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
||
| CDS-3UTR CAA 90 bp | AGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGCGGGGAGCCACCAACTCGCTCATGTaGACATGGTCCGGGACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RDNDHRSIHHVETEGRGATNSLM*TWSGTK Trigger: TTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGT...GGCTCCCCGCCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
||
| CDS-3UTR CAA 90 bp | TTATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGATGATCACCGGGATTTaGCTGGGGTGCTGGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LFCRGTMTTDPYTTWRPRMITGI*LGCWSR Trigger: CCGCGACCAGCACCCCAGCAAAATCCCGGTGATCAT...CCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
||
| CDS-3UTR CAA 90 bp | TTATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGTCCGGGACCAAAAACTaGGTCTTGTCCAGGACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFCRGTMTTDPYTTWRPRSGTKN*VLSRTG Trigger: GCCCGTCCTGGACAAGACCAAGTTTTTGGTCCCGGA...CCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
||
| CDS-3UTR CAA 90 bp | ATTCTGCAGAGGGACAATGACCACAGATCCATACACCACGTGGAGACCGAGGGGACCAACTCGCTCATGTaGACATGGTCCGGGACCAAA | + |
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Preference number: 5 (lower is better) Translates to: ILQRDNDHRSIHHVETEGTNSLM*TWSGTK Trigger: TTTGGTCCCGGACCATGTCAACATGAGCGAGTTGGT...CCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360668.8 ENST00000374837.7 ENST00000397709.1 |
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| CDS CCA 90 bp | ATCTTCATCTGCAAAACTGAGACAGTGTCAGAACTACCTCTGAGGTaGAGGGTCAGTCAGCAACTCGGAAGCCATGGAGTCCCCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: IFICKTETVSELPLR*RVSQQLGSHGVPSS Trigger: TGAGGAGGGGACTCCATGGCTTCCGAGTTGCTGACTGACCCTCCACCTCAGAGGTAGTTCTGACACTGTCTCAGTTTTGCAGATGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS TCA 90 bp | ATCTCATCTTCATCTGCAAAACTGAGACAGTGTCAGAACTACCTCTaGGGTGGAGGGTCAGTCAGCAACTCGGAAGCCATGGAGTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: ISSSSAKLRQCQNYL*GGGSVSNSEAMESP Trigger: AGGGGACTCCATGGCTTCCGAGTTGCTGACTGACCCTCCACCTCAGAGGTAGTTCTGACACTGTCTCAGTTTTGCAGATGAAGATGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS-3UTR CAA 90 bp | GGCAGGCCTGAGCAATCTTTATTCTGCAGAGGGACAATGACCACAGATCCATACCAAAATCCTTTCTCCTaGCACCTGGCTTCCATGCAG | + |
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Preference number: 5 (lower is better) Translates to: GRPEQSLFCRGTMTTDPYQNPFS*HLASMQ Trigger: CTGCATGGAAGCCAGGTGCAAGGAGAAAGGATTTTG...GTATGGATCTGTGGTCATTGTCCCTCTGCAGAATAAAGATTGCTCAGGCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS TCA 72 bp | GTCGGCGAAGCTCCGCCGCTGCTTGAAAGGCCGGTCTaGGGGCATCGCGCGGGCCCGGCTGGGCGCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: VGEAPPLLERPV*GHRAGPAGRAG Trigger: GCCTGCGCGCCCAGCCGGGCCCGCGCGATGCCCTCAGACCGGCCTTTCAAGCAGCGGCGGAGCTTCGCCGAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS TCA 72 bp | ATCACCGAAGCTCCGCCGCTGCTTGAAAGGCCGGTCTaGGGGCATCGCGCGGGCCCGGCTGGGCGCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ITEAPPLLERPV*GHRAGPAGRAG Trigger: GCCTGCGCGCCCAGCCGGGCCCGCGCGATGCCCTCAGACCGGCCTTTCAAGCAGCGGCGGAGCTTCGGTGAT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476428.1 |
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| CDS TCA 72 bp | CCTCCTTACAGCGGTCGGCGAAGCTCCGCCGCTGCTTaGAAGGCCGGTCTGAGGGCATCGCGCGGGCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: PPYSGRRSSAAA*KAGLRASRGPG Trigger: GCCGGGCCCGCGCGATGCCCTCAGACCGGCCTTTCAAGCAGCGGCGGAGCTTCGCCGACCGCTGTAAGGAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS CAA 72 bp | ACCTCCTTACAGCGGTCGGCGAAGCTCCGCCGCTGCTaGAAAGGCCGGTCTGAGGGCATCGCGCGGGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: TSLQRSAKLRRC*KGRSEGIARAR Trigger: CCGGGCCCGCGCGATGCCCTCAGACCGGCCTTTCAAGCAGCGGCGGAGCTTCGCCGACCGCTGTAAGGAGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS TCA 72 bp | GTAGCGCTCGATGATCACCGAAGCTCCGCCGCTGCTTaGAAGGCCGGTCTGAGGGCATCGCGCGGGCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: VALDDHRSSAAA*KAGLRASRGPG Trigger: GCCGGGCCCGCGCGATGCCCTCAGACCGGCCTTTCAAGCAGCGGCGGAGCTTCGGTGATCATCGAGCGCTAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476428.1 |
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| CDS GCA 72 bp | TGTACCTCCTTACAGCGGTCGGCGAAGCTCCGCCGCTaGTTGAAAGGCCGGTCTGAGGGCATCGCGCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: CTSLQRSAKLRR*LKGRSEGIARA Trigger: GGCCCGCGCGATGCCCTCAGACCGGCCTTTCAAGCAGCGGCGGAGCTTCGCCGACCGCTGTAAGGAGGTACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360668.8 ENST00000397709.1 |
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| CDS CCA 72 bp | TGCAAAACTGAGACAGTGTCAGAACTACCTCTGAGGTaGAGGGTCAGTCAGCAACTCGGAAGCCATGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: CKTETVSELPLR*RVSQQLGSHGV Trigger: GACTCCATGGCTTCCGAGTTGCTGACTGACCCTCCACCTCAGAGGTAGTTCTGACACTGTCTCAGTTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS TCA 72 bp | TCATCTGCAAAACTGAGACAGTGTCAGAACTACCTCTaGGGTGGAGGGTCAGTCAGCAACTCGGAAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: SSAKLRQCQNYL*GGGSVSNSEAM Trigger: CATGGCTTCCGAGTTGCTGACTGACCCTCCACCTCAGAGGTAGTTCTGACACTGTCTCAGTTTTGCAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS CCA 72 bp | ACAGCGGTCGGCTGGGTCCACAGCTGCTTTTCCACATaGAGAACTGAAGAATCTCATCTTCATCTGCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: TAVGWVHSCFST*RTEESHLHLQN Trigger: GTTTTGCAGATGAAGATGAGATTCTTCAGTTCTCCATGTGGAAAAGCAGCTGTGGACCCAGCCGACCGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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| CDS TCA 72 bp | TGGAGAACTGAAGAATCTCATCTTCATCTGCAAAACTaGGACAGTGTCAGAACTACCTCTGAGGTGGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: WRTEESHLHLQN*DSVRTTSEVEG Trigger: ACCCTCCACCTCAGAGGTAGTTCTGACACTGTCTCAGTTTTGCAGATGAAGATGAGATTCTTCAGTTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374837.7 |
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