RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP1A (Homo sapiens)

Ensembl gene IDs: ENSG00000166963

Ensembl transcript IDs: ENST00000300231.6, ENST00000382031.5

Found 1111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGTGGCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTaGGGAGGAGCAGAACACAGCAGCACGGGGAGGGTGGAGCTAGGA +
Preference number: 1 (lower is better)
Translates to: GGGSVTAAGNYSREA*GGAEHSSTGRVELG
Trigger: TCCTAGCTCCACCCTCCCCGTGCTGCTGTGTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGCCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR GCA 90 bp CTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTaGTCACTGGCTTGCTTGGGGCGAGGTCCTCTCCTGGGGTGGTAT +
Preference number: 1 (lower is better)
Translates to: LPASGFLSLAVVWQG*SLACLGRGPLLGWY
Trigger: ATACCACCCCAGGAGAGGACCTCGCCCCAAGCAAGCCAGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CCA 90 bp AGAACACAGCAGCACGGGGAGGGTGGAGCTAGGAAGAACACAAGGTaGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGCC +
Preference number: 1 (lower is better)
Translates to: RTQQHGEGGARKNTR*AHFGFPVVWQRRQA
Trigger: GGCTTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTTCCTAGCTCCACCCTCCCCGTGCTGCTGTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR TCA 90 bp GGGGGATGGGAAATGGAGGAAAGGGTGCAGCTCTGGGCACCTCACTaGCGGTATCCTGCCCCAGGTCACATAAATTACTATTGGAAATCC +
Preference number: 1 (lower is better)
Translates to: GGWEMEERVQLWAPH*RYPAPGHINYYWKS
Trigger: GGATTTCCAATAGTAATTTATGTGACCTGGGGCAGGATACCGTCAGTGAGGTGCCCAGAGCTGCACCCTTTCCTCCATTTCCCATCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR GCA 90 bp TGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTaGTGTCTGGACACAGCCCTGGGATGTGAATGGTATAAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: WKNSGIGAWALLAVL*CLDTALGCEWYKAG
Trigger: CCCTGCTTTATACCATTCACATCCCAGGGCTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CCA 90 bp ACTTCAAAGAGTCAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTaGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCCCTGGGA +
Preference number: 1 (lower is better)
Translates to: TSKSQGVWKNSGIGA*ALLAVLCCLDTALG
Trigger: TCCCAGGGCTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTGACTCTTTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR GCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTaGTCTCTGAGACCCATCCTCAGTCCCCATTCAATACCAGCATTT +
Preference number: 1 (lower is better)
Translates to: VPGVGDIISLYEGGG*SLRPILSPHSIPAF
Trigger: AAATGCTGGTATTGAATGGGGACTGAGGATGGGTCTCAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CCA 90 bp CAGCCAGTGTTCCCATTTCAGCTGCAGGATGGCATAGTGGAATGTTaGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAG +
Preference number: 1 (lower is better)
Translates to: QPVFPFQLQDGIVEC*GSHTLLGCQMLGCQ
Trigger: CTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGCTGAAATGGGAACACTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CCA 90 bp AGTAAAAACTTCAAAGAGTCAGGGAGTTTGGAAGAATTCTGGCATTaGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGC +
Preference number: 1 (lower is better)
Translates to: SKNFKESGSLEEFWH*GLGSPCRFVLSGHS
Trigger: GCTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTGACTCTTTGAAGTTTTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CCA 90 bp GGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTaGCTTATTTTTAACCCATTAAACACCAAGCCACAGCAGATGACC +
Preference number: 1 (lower is better)
Translates to: GVTHCWGVKCWDVRQ*LIFNPLNTKPQQMT
Trigger: GGTCATCTGCTGTGGCTTGGTGTTTAATGGGTTAAAAATAAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR TCA 90 bp CTCCTCTCACCAGTCTATTGGTCTAAAGAGCTTCAAGTTTTAAATTaGGACATTCAGATACTGAGGGAAGCAGTAGAACAGTATAGCAGT +
Preference number: 1 (lower is better)
Translates to: LLSPVYWSKELQVLN*DIQILREAVEQYSS
Trigger: ACTGCTATACTGTTCTACTGCTTCCCTCAGTATCTGAATGTCTCAATTTAAAACTTGAAGCTCTTTAGACCAATAGACTGGTGAGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGGCTGCTCACTGGCTTaGTTGGGGCGAGGTCCTCTC +
Preference number: 2 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNGCSLA*LGRGPL
Trigger: GAGAGGACCTCGCCCCAAGCAAGCCAGTGAGCAGCC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGGGGGGAGTGGATCCTTaGGGAAGGGAGGGCGGCTCT +
Preference number: 2 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQGGVDP*GREGGS
Trigger: AGAGCCGCCCTCCCTTCCCCAAGGATCCACTCCCCC...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR GCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCTCCTTGCCGTTTTGTaGTGTCTGGACACAGCCCTG +
Preference number: 2 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPLLAVL*CLDTAL
Trigger: CAGGGCTGTGTCCAGACAGCACAAAACGGCAAGGAG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR GCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGGCTTGGGCTCTCCTTaGCGTTTTGTGCTGTCTGGA +
Preference number: 2 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPGLGSP*RFVLSG
Trigger: TCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGAACTCAGACCCTGGTaGTTGAGGAGATGGGGGATG +
Preference number: 2 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNELRPW*LRRWGM
Trigger: CATCCCCCATCTCCTCAACCACCAGGGTCTGAGTTC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCCGTTTTGTGCTGTCTaGACACAGCCCTGGGATGTG +
Preference number: 2 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHPFCAV*TQPWDV
Trigger: CACATCCCAGGGCTGTGTCCAGACAGCACAAAACGG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTCTGGCATTGGGGCTTaGGCTCTCCTTGCCGTTTTG +
Preference number: 2 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNSGIGA*ALLAVL
Trigger: CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGGTTTCCCAGTCGTTTaGCAGAGAAGGCAAGCCCAC +
Preference number: 2 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNGFPVV*QRRQAH
Trigger: GTGGGCTTGCCTTCTCTGCCAAACGACTGGGAAACC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACCTCACAGGAATGGATaGTGGGGAGGGACAACCCCT +
Preference number: 2 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSPHRNG*WGGTTP
Trigger: AGGGGTTGTCCCTCCCCATCATCCATTCCTGTGAGG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR TCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCCTCACAGGAATGGATaGTGGGGAGGGACAACCCCT +
Preference number: 2 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQPHRNG*WGGTTP
Trigger: AGGGGTTGTCCCTCCCCATCATCCATTCCTGTGAGG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACAAATGGAGGAAAGGGTaGAGCTCTGGGCACCTCACT +
Preference number: 2 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNKWRKG*SSGHLT
Trigger: AGTGAGGTGCCCAGAGCTGCACCCTTTCCTCCATTT...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATAAATGGAGGAAAGGGTaGAGCTCTGGGCACCTCACT +
Preference number: 2 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHKWRKG*SSGHLT
Trigger: AGTGAGGTGCCCAGAGCTGCACCCTTTCCTCCATTT...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGTCCAAGAGCGGGTTTaGAGAGGCAGCCAGTGTTCC +
Preference number: 2 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTVQERV*RGSQCS
Trigger: GGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGAC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACCAAGCCACAGCAGATaGCCACATGCAGAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSPSHSR*PHAEKP
Trigger: TGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR GCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTACGAGGGAGGAGGTTaGTCTCTGAGACCCATCCTC +
Preference number: 2 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTYEGGG*SLRPIL
Trigger: GAGGATGGGTCTCAGAGAGCAACCTCCTCCCTCGTA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCAGTTTGGAAGAATTCTaGCATTGGGGCTTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPSLEEF*HWGLGS
Trigger: AGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTTCAGCTGCAGGATaGCATAGTGGAATGTTGGGG +
Preference number: 2 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPISAAG*HSGMLG
Trigger: CCCCAACATTCCACTATGCCATCCTGCAGCTGAAAT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR TCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAACTCTGGGCACCTCACTaGCGGTATCCTGCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQLWAPH*RYPAPG
Trigger: ACCTGGGGCAGGATACCGTCAGTGAGGTGCCCAGAG...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTATGGGGGATGGGAAATaGAGGAAAGGGTGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTMGDGK*RKGCSS
Trigger: AGAGCTGCACCCTTTCCTCCATTTCCCATCCCCCAT...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAATGGGGGATGGGAAATaGAGGAAAGGGTGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSMGDGK*RKGCSS
Trigger: AGAGCTGCACCCTTTCCTCCATTTCCCATCCCCCAT...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGAAGAATTCTGGCATTaGGGCTTGGGCTCTCCTTGC +
Preference number: 2 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTEEFWH*GLGSPC
Trigger: GCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGAAGAATTCTGGCATTaGGGCTTGGGCTCTCCTTGC +
Preference number: 2 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLEEFWH*GLGSPC
Trigger: GCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACAGTTTGGAAGAATTCTaGCATTGGGGCTTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNSLEEF*HWGLGS
Trigger: AGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACT...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACTCCTTGCCGTTTTGTaGTGTCTGGACACAGCCCTG +
Preference number: 2 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQALLAVL*CLDTAL
Trigger: CAGGGCTGTGTCCAGACAGCACAAAACGGCAAGGAG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGAACTCAGACCCTGGTaGTTGAGGAGATGGGGGATG +
Preference number: 2 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMELRPW*LRRWGM
Trigger: CATCCCCCATCTCCTCAACCACCAGGGTCTGAGTTC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGCCCTGGGATGTGAATaGTATAAAGCAGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLALGCE*YKAGSG
Trigger: CCCAGACCCTGCTTTATACCATTCACATCCCAGGGC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACCGTTTTGTGCTGTCTaGACACAGCCCTGGGATGTG +
Preference number: 2 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAPFCAV*TQPWDV
Trigger: CACATCCCAGGGCTGTGTCCAGACAGCACAAAACGG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTCTGGCATTGGGGCTTaGGCTCTCCTTGCCGTTTTG +
Preference number: 2 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMSGIGA*ALLAVL
Trigger: CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTGGGGTGTCAAATGTTaGGATGTCAGGCAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTWGVKC*DVRQWL
Trigger: AAGCCACTGCCTGACATCCCAACATTTGACACCCCA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACAGGAAGAACACAAGGTaGGCTCATTTTGGTTTCCCA +
Preference number: 2 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNRKNTR*AHFGFP
Trigger: TGGGAAACCAAAATGAGCCCACCTTGTGTTCTTCCT...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CAA 90 bp GCAGCCAGTGTTCCCATTTCAGCTGCAGGATGGCATAGTGGAATGTaGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCA +
Preference number: 2 (lower is better)
Translates to: AASVPISAAGWHSGM*GESHIAGVSNVGMS
Trigger: TGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGCTGAAATGGGAACACTGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAGAGGTCCCTGGAGTTaGGGATATAATCTCCCTCTA +
Preference number: 2 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSRGPWS*GYNLPL
Trigger: TAGAGGGAGATTATATCCCCAACTCCAGGGACCTCT...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR GCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTCACTGACGGTATCCTaGCCCAGGTCACATAAATTA +
Preference number: 2 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTSLTVS*PRSHKL
Trigger: TAATTTATGTGACCTGGGGCAGGATACCGTCAGTGA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR GCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGGCTTGGGCTCTCCTTaGCGTTTTGTGCTGTCTGGA +
Preference number: 2 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQGLGSP*RFVLSG
Trigger: TCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCAGAGGTCCCTGGAGTTaGGGATATAATCTCCCTCTA +
Preference number: 2 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCRGPWS*GYNLPL
Trigger: TAGAGGGAGATTATATCCCCAACTCCAGGGACCTCT...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTAAGAGTCAGGGAGTTTaGAAGAATTCTGGCATTGGG +
Preference number: 2 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLKSQGV*KNSGIG
Trigger: CCCAATGCCAGAATTCTTCCAAACTCCCTGACTCTT...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAAGAGTCAGGGAGTTTaGAAGAATTCTGGCATTGGG +
Preference number: 2 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSKSQGV*KNSGIG
Trigger: CCCAATGCCAGAATTCTTCCAAACTCCCTGACTCTT...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATAAATCCCTCCCAGGATaGCAAATAAATAGATTGAGA +
Preference number: 2 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHKSLPG*QINRLR
Trigger: TCTCAATCTATTTATTTGGCATCCTGGGAGGGATTT...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CAA 90 bp TTTCAGCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATaGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTATTTT +
Preference number: 2 (lower is better)
Translates to: FQLQDGIVECWGSHT*LGCQMLGCQAVAYF
Trigger: AAAATAAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGCTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACTCTCACCAGTCTATTaGTCTAAAGAGCTTCAAGTT +
Preference number: 2 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSLSPVY*SKELQV
Trigger: AACTTGAAGCTCTTTAGACCAATAGACTGGTGAGAG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR TCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCTGTTAACTTTGGTTTaGGACACCTCACAGGAATGG +
Preference number: 2 (lower is better)
Translates to: RRGFSGIRCYPILICPLPLLTLV*DTSQEW
Trigger: CCATTCCTGTGAGGTGTCTCAAACCAAAGTTAACAG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAAGGGATCAGGATAATTaGAATGGGGTGAGTAAAAAC +
Preference number: 2 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQARDQDN*NGVSKN
Trigger: GTTTTTACTCACCCCATTTCAATTATCCTGATCCCT...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTTCTCAGGCATCAGATaGTATCCTATTCTAATTTGT +
Preference number: 2 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQFSGIR*YPILIC
Trigger: ACAAATTAGAATAGGATAGCATCTGATGCCTGAGAA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTTCTCAGGCATCAGATaGTATCCTATTCTAATTTGT +
Preference number: 2 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMFSGIR*YPILIC
Trigger: ACAAATTAGAATAGGATAGCATCTGATGCCTGAGAA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTGGGGGAGTGGATCCTaGGGGAAGGGAGGGCGGCTC +
Preference number: 3 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTWGSGS*GKGGRL
Trigger: GAGCCGCCCTCCCTTCCCCAAGGATCCACTCCCCCA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGGGCTTGGGCTCTCCTaGCCGTTTTGTGCTGTCTGG +
Preference number: 3 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNGLGLS*PFCAVW
Trigger: CCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGGAAGAATTCTGGCATaGGGGCTTGGGCTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPGRILA*GLGLSL
Trigger: CAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTGGGGGAGTGGATCCTaGGGGAAGGGAGGGCGGCTC +
Preference number: 3 (lower is better)
Translates to: RRGFSGIRCYPILICPLPWGSGS*GKGGRL
Trigger: GAGCCGCCCTCCCTTCCCCAAGGATCCACTCCCCCA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTTCTGGCATTGGGGCTaGGGCTCTCCTTGCCGTTTT +
Preference number: 3 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHFWHWG*GSPCRF
Trigger: AAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTGGGGGAGTCACACATaGCTGGGGTGTCAAATGTTG +
Preference number: 3 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPWGSHT*LGCQML
Trigger: CAACATTTGACACCCCAGCAATGTGTGACTCCCCCA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCTACGAGGGAGGAGGTaGCTCTCTGAGACCCATCCT +
Preference number: 3 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLLRGRR*LSETHP
Trigger: AGGATGGGTCTCAGAGAGCAACCTCCTCCCTCGTAG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCTGGGGTGTCAAATGTaGGGATGTCAGGCAGTGGCT +
Preference number: 3 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTLGCQM*GCQAVA
Trigger: AGCCACTGCCTGACATCCCAACATTTGACACCCCAG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR GCA 72 bp TCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTaGTGTCTGGACACAGCCCTGGGATGTGAATGGTAT +
Preference number: 3 (lower is better)
Translates to: SGIGAWALLAVL*CLDTALGCEWY
Trigger: ATACCATTCACATCCCAGGGCTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR GCA 72 bp TTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTaGCGTTTTGTGCTGTCTGGACACAGCCCTGGGATG +
Preference number: 3 (lower is better)
Translates to: LEEFWHWGLGSP*RFVLSGHSPGM
Trigger: CATCCCAGGGCTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCTATCCTATTCTAATTaGTCCCCTCCCCCATCCTCT +
Preference number: 3 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNLSYSN*SPPPSS
Trigger: AGAGGATGGGGGAGGGGACAAATTAGAATAGGATAG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CCA 72 bp TTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTaGACACAGCCCTGGGATGTGAATGGTATAAAGCAG +
Preference number: 3 (lower is better)
Translates to: LGLGLSLPFCAV*TQPWDVNGIKQ
Trigger: CTGCTTTATACCATTCACATCCCAGGGCTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATTCTGGCATTGGGGCTaGGGCTCTCCTTGCCGTTTT +
Preference number: 3 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAFWHWG*GSPCRF
Trigger: AAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGGAAGAATTCTGGCATaGGGGCTTGGGCTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMGRILA*GLGLSL
Trigger: CAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTCACATAAATTACTATaGGAAATCCCTCCCAGGATG +
Preference number: 3 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPSHKLL*EIPPRM
Trigger: CATCCTGGGAGGGATTTCCAATAGTAATTTATGTGA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAATTCAATACCAGCATTaGACAGTGCTAGGAGAGGGT +
Preference number: 3 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSIQYQH*TVLGEG
Trigger: ACCCTCTCCTAGCACTGTCAAATGCTGGTATTGAAT...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR TCA 72 bp GAAATGGAGGAAAGGGTGCAGCTCTGGGCACCTCACTaGCGGTATCCTGCCCCAGGTCACATAAATTACTAT +
Preference number: 3 (lower is better)
Translates to: EMEERVQLWAPH*RYPAPGHINYY
Trigger: ATAGTAATTTATGTGACCTGGGGCAGGATACCGTCAGTGAGGTGCCCAGAGCTGCACCCTTTCCTCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR GCA 72 bp GTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTaGTCTCTGAGACCCATCCTCAGTCCCCATTCAATA +
Preference number: 3 (lower is better)
Translates to: VGDIISLYEGGG*SLRPILSPHSI
Trigger: TATTGAATGGGGACTGAGGATGGGTCTCAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR GCA 72 bp AACCCATTAAACACCAAGCCACAGCAGATGACCACATaGAGAGAAGCCAAGCAGGGGATGAGAAGGGATCAG +
Preference number: 3 (lower is better)
Translates to: NPLNTKPQQMTT*REAKQGMRRDQ
Trigger: CTGATCCCTTCTCATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAATGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CCA 72 bp TTCAAAGAGTCAGGGAGTTTGGAAGAATTCTGGCATTaGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCT +
Preference number: 3 (lower is better)
Translates to: FKESGSLEEFWH*GLGSPCRFVLS
Trigger: AGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTGACTCTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTCACATAAATTACTATaGGAAATCCCTCCCAGGATG +
Preference number: 3 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMSHKLL*EIPPRM
Trigger: CATCCTGGGAGGGATTTCCAATAGTAATTTATGTGA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CCA 72 bp CATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTaGCTTATTTTTAACCCATTAAACACCAAGCCACAG +
Preference number: 3 (lower is better)
Translates to: HCWGVKCWDVRQ*LIFNPLNTKPQ
Trigger: CTGTGGCTTGGTGTTTAATGGGTTAAAAATAAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCTGCAGGTCCCAGCGTaGAGCCGCCACCGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPLQVPA*SRHRGS
Trigger: GGAGCCGCGGTGGCGGCTGCACGCTGGGACCTGCAG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGGGGCCGAGGCTCAGTaGCACATCCCTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNGAEAQ*HIPGAQ
Trigger: CTGGGCCCCAGGGATGTGCCACTGAGCCTCGGCCCC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCTGGGCTCAGAGGAGTaGGGTCCCAGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPLGSEE*GPRGCG
Trigger: CCCACAGCCTCTGGGACCTCACTCCTCTGAGCCCAG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTAGCTCCGCGGGGTTCTaGGCCAGCGGTGCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLSSAGF*ASGAPG
Trigger: TCCCGGCGCACCGCTGGCTCAGAACCCCGCGGAGCT...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCCAGGGGCTCCGGGTTaGGTGTTCCCGCAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNPGAPG*VFPQGY
Trigger: GTACCCCTGCGGGAACACGCAACCCGGAGCCCCTGG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACACGCTGGCTTGGCCTTaGCTGGGGCCCTGCGCCCTA +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNTLAWP*LGPCAL
Trigger: TAGGGCGCAGGGCCCCAGGCAAGGCCAAGCCAGCGT...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTGGCTTGGCCTTGCCTaGGGCCCTGCGCCCTACTCG +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNWLGLA*GPAPYS
Trigger: CGAGTAGGGCGCAGGGCCCCAGGCAAGGCCAAGCCA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCAGCACAGCCCGGCTTaGCTCGCCATTGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPQHSPA*LAIGRV
Trigger: GACCCTGCCAATGGCGAGCCAAGCCGGGCTGTGCTG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCCAGGCCTGGGGTGGTaGGTACCACTGACACCCCCA +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHPGLGW*VPLTPP
Trigger: TGGGGGTGTCAGTGGTACTCACCACCCCAGGCCTGG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTACTCTCCCAGACTCTaGGCTGAGCCCCTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPYSPRL*AEPLGV
Trigger: GACCCCGAGGGGCTCAGCTCAGAGTCTGGGAGAGTA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTCCATGGCAACGCCGTaGGGCCGCGCAGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILSMATP*GRAGSA
Trigger: GGCCGAGCCTGCGCGGCCTCACGGCGTTGCCATGGA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCCTCAGGAGAGGCACTaGTGGGTGGGCCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLPQERH*WVGPRS
Trigger: GCTCCGGGGGCCCACCCAGCAGTGCCTCTCCTGAGG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGGCTGCTCACTGGCTTaGTTGGGGCGAGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPGCSLA*LGRGPL
Trigger: GAGAGGACCTCGCCCCAAGCAAGCCAGTGAGCAGCC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCATGCCGGGTTCTGGTaGGGGGTCCTGGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHHAGFW*GVLEPE
Trigger: CTCTGGCTCCAGGACCCCCCACCAGAACCCGGCATG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGGGCCCCAGGAGAACTaGGTGATGGGAGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNGPQEN*VMGAGA
Trigger: TGCCCCAGCTCCCATCACCCAGTTCTCCTGGGGCCC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCAGTCACAGGGCATaGGCCCCCAGTGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPISHRA*APSGPW
Trigger: CCAGGGACCACTGGGGGCCCATGCCCTGTGACTGAT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCCGTGCAGGGGACGCTaGCTTGGCCTTGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLPCRGR*LGLAWG
Trigger: GCCCCAGGCAAGGCCAAGCCAGCGTCCCCTGCACGG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGCGCTCCGCCACACTTaGAATCACAGGCGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPALRHT*NHRRGS
Trigger: GCTACCACGCCTGTGATTTCAAGTGTGGCGGAGCGC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCTCCGTGGCTGCCTCTaGGCACTCCAGGTGGCACGG +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLLRGCL*ALQVAR
Trigger: CCGTGCCACCTGGAGTGCTCAGAGGCAGCCACGGAG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTGCTCCGGCTCAGTCTaGTCAGGCTCCGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNCSGSV*SGSVVA
Trigger: TGCCACCACGGAGCCTGAGCAGACTGAGCCGGAGCA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACAAGATCCAGACGCCGTaGAGGGGACGCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNKIQTP*RGRWLG
Trigger: GCCAAGCCAGCGTCCCCTGCACGGCGTCTGGATCTT...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACCTGGCTTGTGGTGCTaGGTGGTCGAGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSPGLWC*VVEVGP
Trigger: GGGCCCCACCTCGACCACGCAGCACCACAAGCCAGG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGTTCTGAGCCAGCGGTaGGCCGGGACTTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLVLSQR*AGTSEP
Trigger: GGGCTCCGAAGTCCCGGCGCACCGCTGGCTCAGAAC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGGAAGCCCCCTGAGGTaGGGGGCTCTAGTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPGSPLR*GALVGQ
Trigger: TTGACCTACTAGAGCCCCCCACCTCAGGGGGCTTCC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGGTACAGTTCCCTTCTaGGCTGGGGGTGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHGTVPF*AGGVWG
Trigger: GCCCCAGACACCCCCAGCCCAGAAGGGAACTGTACC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTTGGTTGGCAGTGTCTaGGGAGGGCACGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPLVGSV*GGHAED
Trigger: GTCCTCAGCGTGCCCTCCCCAGACACTGCCAACCAA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTTCCTCAGTGTAGTGTaGGCGGGCCCCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNFLSVV*AGPLAI
Trigger: GATGGCCAGGGGGCCCGCCCACACTACACTGAGGAA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGGAGGGGTCTGTCCTTaGGCACCCAGGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHGGVCP*APRVGC
Trigger: ACATCCCACCCTGGGTGCCCAAGGACAGACCCCTCC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGGCTCCGTGGTGGCATaGCTTTTGCTGGCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPGSVVA*LLLASG
Trigger: ACCAGAGGCCAGCAAAAGCCATGCCACCACGGAGCC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCTCCATACTTGGCCCTaGCTCTGGCCTTGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPLHTWP*LWPWGY
Trigger: GTACCCCCAAGGCCAGAGCCAGGGCCAAGTATGGAG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGGGGCCGAGGCTCAGTaGCACATCCCTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCGAEAQ*HIPGAQ
Trigger: CTGGGCCCCAGGGATGTGCCACTGAGCCTCGGCCCC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGGGATGGGCGGGGGTCTaGCTGTGGGAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQGWAGV*LWERRW
Trigger: CCACCTCCTCTCCCACAGCCAGACCCCCGCCCATCC...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGGATGGGCGGGGGTCTaGCTGTGGGAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSGWAGV*LWERRW
Trigger: CCACCTCCTCTCCCACAGCCAGACCCCCGCCCATCC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCCGTGCAGGGGACGCTaGCTTGGCCTTGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLPCRGR*LGLAWG
Trigger: GCCCCAGGCAAGGCCAAGCCAGCGTCCCCTGCACGG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGCTGCGTGGTCGAGGTaGGGCCCGGGATGCTCGATC +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTAAWSR*GPGCSI
Trigger: GATCGAGCATCCCGGGCCCCACCTCGACCACGCAGC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGCTTGTGGTGCTGCGTaGTCGAGGTGGGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTACGAA*SRWGPG
Trigger: TCCCGGGCCCCACCTCGACCACGCAGCACCACAAGC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTCTGCTGGGGTGACCTaGCTTGTGGTGCTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPSAGVT*LVVLRG
Trigger: ACCACGCAGCACCACAAGCCAGGTCACCCCAGCAGA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTGCCACTCTGTAGGATaGGGTCTCCCCCAGGCTCTA +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPCHSVG*GLPQAL
Trigger: TAGAGCCTGGGGGAGACCTCATCCTACAGAGTGGCA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCAGGAGTCTGCCTCCTaGAAGTCTTGGGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPQESAS*KSWGSD
Trigger: GTCTGAGCCCCAAGACTTTCAGGAGGCAGACTCCTG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCCCATCTGTGGGAGGTaGCGCTGTGGCTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTPICGR*RCGCMG
Trigger: CCCCATGCAGCCACAGCGTCACCTCCCACAGATGGG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGCAGGCCCCAGGTGTaGGTCCAAGGGAGGGCTAAC +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGRPQV*VQGRAN
Trigger: GTTAGCCCTCCCTTGGACTCACACCTGGGGCCTGCC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCTGGGCTCAGAGGAGTaGGGTCCCAGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQLGSEE*GPRGCG
Trigger: CCCACAGCCTCTGGGACCTCACTCCTCTGAGCCCAG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCCAGGCCTGGGGTGGTaGGTACCACTGACACCCCCA +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLPGLGW*VPLTPP
Trigger: TGGGGGTGTCAGTGGTACTCACCACCCCAGGCCTGG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTCCCAGACTCTGAGCTaGGCCCCTCGGGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLSQTLS*APRGQP
Trigger: TGGCTGACCCCGAGGGGCTCAGCTCAGAGTCTGGGA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCGCCCTACTCGCCCCTaGACCTTTTCCTTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNRPTRP*TFSFSR
Trigger: ACGGGAGAAGGAAAAGGTTCAGGGGCGAGTAGGGCG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGCAGCAGGGAGCTCTTaGCTGTCTCCTCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNAAGSS*LSPLSG
Trigger: CCCAGACAGAGGAGACAGGCAAGAGCTCCCTGCTGC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCCAGGGGCTCCGGGTTaGGTGTTCCCGCAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILPGAPG*VFPQGY
Trigger: GTACCCCTGCGGGAACACGCAACCCGGAGCCCCTGG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTAAGGGAGCCACAGGGTaGCGAGCGGGGTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLKGATG*RAGFSW
Trigger: CCAGCTGAACCCCGCTCGGCACCCTGTGGCTCCCTT...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACCTCAGGAGAGGCACTaGTGGGTGGGCCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAPQERH*WVGPRS
Trigger: GCTCCGGGGGCCCACCCAGCAGTGCCTCTCCTGAGG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCACGCTGGCTTGGCCTTaGCTGGGGCCCTGCGCCCTA +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCTLAWP*LGPCAL
Trigger: TAGGGCGCAGGGCCCCAGGCAAGGCCAAGCCAGCGT...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCAGGGGCACCAGAGCTaGCCTTGGAACTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHQGHQS*PWNSRP
Trigger: TGGCCTTGAGTTCCAAGGGCAGCTCTGGTGCCCCTG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGAGGAAGCCTCTCATaGAGGCGGCAGCTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGGSLS*RRQLRP
Trigger: AGGCCGGAGCTGCCGCCTCCATGAGAGGCTTCCTCC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300231.6
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTGGCAAAGGGTCCTCTaGCCCTGGGGTGTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNWQRVL*PWGVGG
Trigger: TCCTCCTACACCCCAGGGCCAGAGGACCCTTTGCCA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300231.6
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCCACGCCGTCCATGGTaGGCAGAGTGGGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQPRRPW*AEWAQG
Trigger: ACCCTGAGCCCACTCTGCCCACCATGGACGGCGTGG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGGAAGCCCCCTGAGGTaGGGGGCTCTAGTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHGSPLR*GALVGQ
Trigger: TTGACCTACTAGAGCCCCCCACCTCAGGGGGCTTCC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGAAAGGGTGTGTGGGTaGCACTGGGTGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHERVCG*HWVGQM
Trigger: CATCTGGCCCACCCAGTGCCACCCACACACCCTTTC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCGGCAGCTGCCTCCTTaGTTGAGAGGCATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQRQLPP*LRGMGA
Trigger: GGCCCCCATGCCTCTCAACCAAGGAGGCAGCTGCCG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCGAGCGGGGTTCAGCTaGAGAGGGCAGCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILRAGFS*RGQLWG
Trigger: CCCCCACAGCTGCCCTCTCCAGCTGAACCCCGCTCG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGGGCCCCAGGAGAACTaGGTGATGGGAGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLGPQEN*VMGAGA
Trigger: TGCCCCAGCTCCCATCACCCAGTTCTCCTGGGGCCC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTCTGCTGGGGTGACCTaGCTTGTGGTGCTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNSAGVT*LVVLRG
Trigger: ACCACGCAGCACCACAAGCCAGGTCACCCCAGCAGA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGGGCAGGGCTGCTCACTaGCTTGCTTGGGGCGAGGTC +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQGRAAH*LAWGEV
Trigger: GACCTCGCCCCAAGCAAGCCAGTGAGCAGCCCTGCC...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGGCAGGGCTGCTCACTaGCTTGCTTGGGGCGAGGTC +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLGRAAH*LAWGEV
Trigger: GACCTCGCCCCAAGCAAGCCAGTGAGCAGCCCTGCC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCCGGAGTTGTCTCCATaGCAACGCCGTGAGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLPELSP*QRREAA
Trigger: CGCGGCCTCACGGCGTTGCCATGGAGACAACTCCGG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR TCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGCCCCTCATCAATGTTaGCAGGTGCTTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHAPHQC*QVLPGP
Trigger: AGGCCCAGGAAGCACCTGTCAACATTGATGAGGGGC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACTGGGGAGGGCACGCTaGGGACAGAGAGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSLGRAR*GQRGIL
Trigger: CAGAATCCCTCTCTGTCCTCAGCGTGCCCTCCCCAG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCCCATCTGTGGGAGGTaGCGCTGTGGCTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCPICGR*RCGCMG
Trigger: CCCCATGCAGCCACAGCGTCACCTCCCACAGATGGG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTCCTGGAAATCCTTaGAGTCTGAGGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPIPGNP*SLRPRG
Trigger: GCCCCTGGGCCTCAGACTTCAAGGATTTCCAGGAAT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACAAGCTGGAGGGGAGATaGTCTCAAAGGGAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNKLEGR*SQRESG
Trigger: CCCGCTCTCCCTTTGAGATCATCTCCCCTCCAGCTT...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACCAGTGACTCCGGCCTaGTTCCTTGGGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSPVTPA*FLGGWG
Trigger: TCCCCATCCCCCAAGGAATCAGGCCGGAGTCACTGG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGGCAGGCCCCAGGTGTaGGTCCAAGGGAGGGCTAAC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILGRPQV*VQGRAN
Trigger: GTTAGCCCTCCCTTGGACTCACACCTGGGGCCTGCC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCTCCGTGGCTGCCTCTaGGCACTCCAGGTGGCACGG +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMLRGCL*ALQVAR
Trigger: CCGTGCCACCTGGAGTGCTCAGAGGCAGCCACGGAG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGGGCTGCCTCAGCTGTaGTGGACGGACACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLGLPQL*WTDTPQ
Trigger: CTGAGGAGTGTCCGTCCATCACAGCTGAGGCAGCCC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGGTGGTGAGTACCACTaGCACCCCCAGCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHGGEYH*HPQLCP
Trigger: TGGACAAAGCTGGGGGTGTCAGTGGTACTCACCACC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTACTCTCCCAGACTCTaGGCTGAGCCCCTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQYSPRL*AEPLGV
Trigger: GACCCCGAGGGGCTCAGCTCAGAGTCTGGGAGAGTA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGGGTCCTCTGGCCTTTaGCCTCTGAGGAGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNGSSGL*PLRRSE
Trigger: CTCACTTCTCCTCAGAGGTCAAAGGCCAGAGGACCC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATAGGCGGTTTAAGTGCTaGAGAGTGAGGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHRRFKC*RVRQAS
Trigger: GGAGGCCTGCCTCACTCTGCAGCACTTAAACCGCCT...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGAGGCTCAGCCTGGATaGCCAGGCGGTTTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNEAQPG*PGGLSA
Trigger: AGCACTTAAACCGCCTGGGCATCCAGGCTGAGCCTC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACATGCTCAGTGGCTCCTaGAGGTGTGGTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNMLSGS*RCGQAA
Trigger: AGCAGCCTGACCACACCTGCAGGAGCCACTGAGCAT...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCCTGGATGTAGGGCATaGCCAGGGGCACTAAACACT +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPPGCRA*PGALNT
Trigger: AGTGTTTAGTGCCCCTGGGCATGCCCTACATCCAGG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTCCGGGAAGGGCTTCTaGTCCCAGAATTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHSGKGF*SQNWAC
Trigger: ACAGGCCCAATTCTGGGAGCAGAAGCCCTTCCCGGA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCTGGCCCTGCCCTCCTaGACTAGGCTCTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTLALPS*TRLSSR
Trigger: CCTGGAAGAGAGCCTAGTGCAGGAGGGCAGGGCCAG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCTGGCCCTGCCCTCCTaGACTAGGCTCTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLLALPS*TRLSSR
Trigger: CCTGGAAGAGAGCCTAGTGCAGGAGGGCAGGGCCAG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTGCCCCCTCCTGCACTaGAGCCACCACACTGTCATA +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHCPLLH*SHHTVI
Trigger: TATGACAGTGTGGTGGCTGCAGTGCAGGAGGGGGCA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTGCTCCGGCTCAGTCTaGTCAGGCTCCGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTCSGSV*SGSVVA
Trigger: TGCCACCACGGAGCCTGAGCAGACTGAGCCGGAGCA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGGGTACAGTGGGTCCTaGCAGGGCTGCATAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHGYSGS*QGCIAE
Trigger: TTCAGCTATGCAGCCCTGGCAGGACCCACTGTACCC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCAAGGGAGCCACAGGGTaGCGAGCGGGGTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCKGATG*RAGFSW
Trigger: CCAGCTGAACCCCGCTCGGCACCCTGTGGCTCCCTT...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACCTGGCTTGTGGTGCTaGGTGGTCGAGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAPGLWC*VVEVGP
Trigger: GGGCCCCACCTCGACCACGCAGCACCACAAGCCAGG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGGCTGCTCACTGGCTTaGTTGGGGCGAGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSGCSLA*LGRGPL
Trigger: GAGAGGACCTCGCCCCAAGCAAGCCAGTGAGCAGCC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATAGGATCTCACTCTGGTaGCAAAGGGTCCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHRISLW*QRVLWP
Trigger: GGGCCAGAGGACCCTTTGCCACCAGAGTGAGATCCT...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300231.6
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCCACGCCGTCCATGGTaGGCAGAGTGGGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILPRRPW*AEWAQG
Trigger: ACCCTGAGCCCACTCTGCCCACCATGGACGGCGTGG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGTACAGTTCCCTTCTaGGCTGGGGGTGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGTVPF*AGGVWG
Trigger: GCCCCAGACACCCCCAGCCCAGAAGGGAACTGTACC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCACTGTGCTGTCATCTaGGCTAAGGCACCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNHCAVI*AKAPLL
Trigger: GAGGAGCGGTGCCTTAGCCCAGATGACAGCACAGTG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTTCCTCAGTGTAGTGTaGGCGGGCCCCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLFLSVV*AGPLAI
Trigger: GATGGCCAGGGGGCCCGCCCACACTACACTGAGGAA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGAGGGGTCTGTCCTTaGGCACCCAGGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGGVCP*APRVGC
Trigger: ACATCCCACCCTGGGTGCCCAAGGACAGACCCCTCC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCATCAGGATAGGGTGTaGGCTCTCTCTGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHHQDRV*ALSAPA
Trigger: AGCCGGAGCAGAGAGAGCCCACACCCTATCCTGATG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCGGCAGCTGCCTCCTTaGTTGAGAGGCATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLRQLPP*LRGMGA
Trigger: GGCCCCCATGCCTCTCAACCAAGGAGGCAGCTGCCG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGCCTTGGGGGTACAGTaGGTCCTGCCAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLALGVQ*VLPGLH
Trigger: ATGCAGCCCTGGCAGGACCCACTGTACCCCCAAGGC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGGCCTTGGGGGTACAGTaGGTCCTGCCAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQALGVQ*VLPGLH
Trigger: ATGCAGCCCTGGCAGGACCCACTGTACCCCCAAGGC...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTACTTGGCCCTGGCTCTaGCCTTGGGGGTACAGTGGG +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLTWPWL*PWGYSG
Trigger: CCCACTGTACCCCCAAGGCCAGAGCCAGGGCCAAGT...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCAGGGAAGTCCAGACTaGGTCGGGCAGGCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCQGSPD*VGQAPG
Trigger: ACCTGGGGCCTGCCCGACCCAGTCTGGACTTCCCTG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCGAGCGGGGTTCAGCTaGAGAGGGCAGCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMRAGFS*RGQLWG
Trigger: CCCCCACAGCTGCCCTCTCCAGCTGAACCCCGCTCG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCATGCCGGGTTCTGGTaGGGGGTCCTGGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILHAGFW*GVLEPE
Trigger: CTCTGGCTCCAGGACCCCCCACCAGAACCCGGCATG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCCAGGCTGGGGGCCTTaGTCACTTCCAGGTATTCAT +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPPGWGP*SLPGIH
Trigger: ATGAATACCTGGAAGTGACCAAGGCCCCCAGCCTGG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGTGAGGAATCCAGGCTaGGGGCCTTGGTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHVRNPG*GPWSLP
Trigger: TGGAAGTGACCAAGGCCCCCAGCCTGGATTCCTCAC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACAGGTCGTGGCAGATTaGAGAGGAGAGGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSQVVAD*RGEGPQ
Trigger: CTGGGGCCCCTCTCCTCTCCAATCTGCCACGACCTG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTCCTCAGAGGGAACCTaGAAGGGGCTTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHSSEGT*KGLGFS
Trigger: GGAGAAGCCAAGCCCCTTCCAGGTTCCCTCTGAGGA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGATCAGTCACAGGGCATaGGCCCCCAGTGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLISHRA*APSGPW
Trigger: CCAGGGACCACTGGGGGCCCATGCCCTGTGACTGAT...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTCTGGCATTGGGGCTTaGGCTCTCCTTGCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPSGIGA*ALLAVL
Trigger: CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGTCCAAGAGCGGGTTTaGAGAGGCAGCCAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHVQERV*RGSQCS
Trigger: GGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGAC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTATCCCTTGTTCAAGGTaGGCCCGCACGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLIPCSR*ARTALS
Trigger: GCTGAGGGCCGTGCGGGCCCACCTTGAACAAGGGAT...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGAAGGCTTGGAGAGCTTaGGGAAGCCCCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLKAWRA*GSPLRW
Trigger: CCACCTCAGGGGGCTTCCTCAAGCTCTCCAAGCCTT...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTAAGGCTTGGAGAGCTTaGGGAAGCCCCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTKAWRA*GSPLRW
Trigger: CCACCTCAGGGGGCTTCCTCAAGCTCTCCAAGCCTT...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCTTCAGTGCCTCACTTaGCTCTGTCTTCACCCTCTC +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPLQCLT*LCLHPL
Trigger: GAGAGGGTGAAGACAGAGTCAAGTGAGGCACTGAAG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGGCTCCTGTCTATTTTaGCTCTTCCAGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPGSCLF*LFQGPW
Trigger: CCAAGGTCCCTGGAAGAGTCAAAATAGACAGGAGCC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGGCTCCCTGTGCCCACTaGTGGTTGGGAGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQAPCAH*WLGVVQ
Trigger: CTGTACCACTCCCAACCATCAGTGGGCACAGGGAGC...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGCTCCCTGTGCCCACTaGTGGTTGGGAGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSAPCAH*WLGVVQ
Trigger: CTGTACCACTCCCAACCATCAGTGGGCACAGGGAGC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGATGGGAGCTGTGTGGTaGGAGGTATCCTCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQMGAVW*EVSSAC
Trigger: GCAGGCCGAGGATACCTCTCACCACACAGCTCCCAT...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGTTCATCAGGGCTTGTaGTCGCCCCAGGTAAGTACT +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPVHQGL*SPQVST
Trigger: AGTACTTACCTGGGGCGATCACAAGCCCTGATGAAC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGGCCATCCAGCTCGTaGGGGAACCAGACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLWPSSS*GNQTFR
Trigger: GCGGAAGGTCTGGTTCCCTCACGAGCTGGATGGCCA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCTCTTGTCCTGGGGCTaGAGGAACCCTTTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHLLSWG*RNPLSN
Trigger: GTTGGACAAAGGGTTCCTTCAGCCCCAGGACAAGAG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGATGTCAGCCAGCCATaGGGGAGTAGTGGGTTCATT +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPDVSQP*GSSGFI
Trigger: AATGAACCCACTACTCCCTCATGGCTGGCTGACATC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGAGCTGCCTCCTTGGTTaGGAGGCATGGGGGCCAATC +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLSCLLG*EAWGPI
Trigger: GATTGGCCCCCATGCCTCTCAACCAAGGAGGCAGCT...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTCCCAGACTCTGAGCTaGGCCCCTCGGGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMSQTLS*APRGQP
Trigger: TGGCTGACCCCGAGGGGCTCAGCTCAGAGTCTGGGA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCGCCCTACTCGCCCCTaGACCTTTTCCTTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTRPTRP*TFSFSR
Trigger: ACGGGAGAAGGAAAAGGTTCAGGGGCGAGTAGGGCG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGTCACCTCCGTGTCATaGGTAGGGATCAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHVTSVS*VGIRVT
Trigger: GGTGACTCTGATCCCTACTCATGACACGGAGGTGAC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCTCTGGGCACCTCACTaGCGGTATCCTGCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLLWAPH*RYPAPG
Trigger: ACCTGGGGCAGGATACCGTCAGTGAGGTGCCCAGAG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCTCTGGGCACCTCACTaGCGGTATCCTGCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCLWAPH*RYPAPG
Trigger: ACCTGGGGCAGGATACCGTCAGTGAGGTGCCCAGAG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGAAGGCAAGCCCACATaGCTACCAGCTTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPEGKPT*LPASGF
Trigger: AAACCCAGAAGCTGGTAGTCATGTGGGCTTGCCTTC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACACCTCTGAGGAGAAGTaGGCTAGGTGCCGGGTAATG +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNTSEEK*ARCRVM
Trigger: CATTACCCGGCACCTAGCTCACTTCTCCTCAGAGGT...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCGCAGGAAGTCCAGATaGCGAAGCTTTTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHRRKSR*RSFSRP
Trigger: GGGCCTAGAAAAGCTTCGGCATCTGGACTTCCTGCG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGCAGCAGGGAGCTCTTaGCTGTCTCCTCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTAAGSS*LSPLSG
Trigger: CCCAGACAGAGGAGACAGGCAAGAGCTCCCTGCTGC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCCAGGGAGGTCTCCTTaGTGGGACTCTCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHPGRSP*WDSLLT
Trigger: TGTCAGAAGAGAGTCCCAGCAAGGAGACCTCCCTGG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCAGTACTTTTCTTCCTaGTCTCTGGCCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNQYFSS*SLALPS
Trigger: GGAGGGCAGGGCCAGAGAGCAGGAAGAAAAGTACTG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATAGATGTGTCCTCCCATaGCGGGGCAAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHRCVLP*RGKLFL
Trigger: CAGAAAGAGCTTGCCCCGGCATGGGAGGACACATCT...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGACCTTCCAACTCAGCTaGCCCCTCCTGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLTFQLS*PLLHCS
Trigger: GCTGCAGTGCAGGAGGGGGCAGCTGAGTTGGAAGGT...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGGTGTGGGCTCTCTCTaGTCCGGCTCAGTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLGVGSL*SGSVCS
Trigger: TGAGCAGACTGAGCCGGAGCAGAGAGAGCCCACACC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGGGCCAATCCCCAGCTaGTCCAAGTGGAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSGPIPS*SKWRLS
Trigger: AGAGAGCCTCCACTTGGAGCAGCTGGGGATTGGCCC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTGTGGGGGAGCTGGCTaGAATGAGGAGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHCGGAG*NEEKPK
Trigger: CTTTGGCTTCTCCTCATTGCAGCCAGCTCCCCCACA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTAGGTGGGGCCCGGGATaGTCGATCTGCAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILRWGPG*SICRPF
Trigger: AAAGGGCCTGCAGATCGAGCATCCCGGGCCCCACCT...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCAGGGGCACCAGAGCTaGCCTTGGAACTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLQGHQS*PWNSRP
Trigger: TGGCCTTGAGTTCCAAGGGCAGCTCTGGTGCCCCTG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTACGAGGGAGGAGGTTaGTCTCTGAGACCCATCCTC +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNYEGGG*SLRPIL
Trigger: GAGGATGGGTCTCAGAGAGCAACCTCCTCCCTCGTA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTACGAGGGAGGAGGTTaGTCTCTGAGACCCATCCTC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHYEGGG*SLRPIL
Trigger: GAGGATGGGTCTCAGAGAGCAACCTCCTCCCTCGTA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGGCTTGGGCTCTCCTTaGCGTTTTGTGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHGLGSP*RFVLSG
Trigger: TCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGGGGGAGTCACACATTaGTGGGGTGTCAAATGTTGG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPGGVTH*WGVKCW
Trigger: CCAACATTTGACACCCCAGCAATGTGTGACTCCCCC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCCTCAATGCTACGCTTaGCTTTCCGGGAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNPQCYA*LSGRHQ
Trigger: CTGATGCCTCCCGGAAAGCCAAGCGTAGCATTGAGG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTATAGAGGCTCAGCCTaGATGCCCAGGCGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPYRGSA*MPRRFK
Trigger: CTTAAACCGCCTGGGCATCCAGGCTGAGCCTCTATA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTCTTCTCAGTGGGATTaGCTGGTAGCCAGACCACCA +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPSSQWD*LVARPP
Trigger: TGGTGGTCTGGCTACCAGCCAATCCCACTGAGAAGA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACCAGGTCCTTCTGCGTaGCCACAGGGTAACGCAGGA +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSPGPSA*PQGNAG
Trigger: TCCTGCGTTACCCTGTGGCCACGCAGAAGGACCTGG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCACTGATGGTTGGGAGTaGTACAGTTCCCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPTDGWE*YSSLLG
Trigger: GCCCAGAAGGGAACTGTACCACTCCCAACCATCAGT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTTCTTGTCCCAGCCCTaGAACAGAGGGTGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNFLSQP*NRGWCS
Trigger: GGAACACCACCCTCTGTTCCAGGGCTGGGACAAGAA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCAAGAGACATGCTCAGTaGCTCCTGCAGGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPKRHAQ*LLQVWS
Trigger: TGACCACACCTGCAGGAGCCACTGAGCATGTCTCTT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAAATCTGGGTGGAGCTaGGCGCTCCTCCGGCTCATC +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSKSGWS*ALLRLI
Trigger: GATGAGCCGGAGGAGCGCCCAGCTCCACCCAGATTT...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCAGGAGGTGGGTGAGATaGTACCAGCTGATGGCACAT +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPRRWVR*YQLMAH
Trigger: ATGTGCCATCAGCTGGTACCATCTCACCCACCTCCT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCTCAGGTGGGGAAGCTaGAGGGGAGATGATCTCAAA +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPLRWGS*RGDDLK
Trigger: TTTGAGATCATCTCCCCTCCAGCTTCCCCACCTGAG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGACTTGGCCCTGGCTCTaGCCTTGGGGGTACAGTGGG +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLTWPWL*PWGYSG
Trigger: CCCACTGTACCCCCAAGGCCAGAGCCAGGGCCAAGT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACTCCATACTTGGCCCTaGCTCTGGCCTTGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSLHTWP*LWPWGY
Trigger: GTACCCCCAAGGCCAGAGCCAGGGCCAAGTATGGAG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTTGGGCCTCTTTTTCTaGCTGTTCCCGAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHLGLFF*LFPSPL
Trigger: AAGGGGGCTCGGGAACAGCCAGAAAAAGAGGCCCAA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCTGGGTGATGGGAGCTaGGGCAGTGAGGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTLGDGS*GSEESR
Trigger: CCTGGATTCCTCACTGCCCCAGCTCCCATCACCCAG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCTGGGTGATGGGAGCTaGGGCAGTGAGGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLLGDGS*GSEESR
Trigger: CCTGGATTCCTCACTGCCCCAGCTCCCATCACCCAG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCAGGTCGTGGCAGATTaGAGAGGAGAGGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLQVVAD*RGEGPQ
Trigger: CTGGGGCCCCTCTCCTCTCCAATCTGCCACGACCTG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTGCAGCCTCAAGGCTTaGAGAGAAGCGCTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLCSLKA*REALRH
Trigger: GTGGCGGAGCGCTTCTCTCCAAGCCTTGAGGCTGCA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTGCAGCCTCAAGGCTTaGAGAGAAGCGCTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTCSLKA*REALRH
Trigger: GTGGCGGAGCGCTTCTCTCCAAGCCTTGAGGCTGCA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGGCTTGGCTTCTCCGTaGCTGCCTCTGAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLGLASP*LPLSTP
Trigger: TGGAGTGCTCAGAGGCAGCCACGGAGAAGCCAAGCC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGCTTGGCTTCTCCGTaGCTGCCTCTGAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGLASP*LPLSTP
Trigger: TGGAGTGCTCAGAGGCAGCCACGGAGAAGCCAAGCC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTCAGTGGCACATCCCTaGGGCCCAGCTTCGACCTCA +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLSVAHP*GPASTS
Trigger: TGAGGTCGAAGCTGGGCCCCAGGGATGTGCCACTGA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTTCAGTGGCACATCCCTaGGGCCCAGCTTCGACCTCA +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLSVAHP*GPASTS
Trigger: TGAGGTCGAAGCTGGGCCCCAGGGATGTGCCACTGA...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCCTATCATCTATGGATaGGGGCAGAGGTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPPIIYG*GQRWVQ
Trigger: CTGAACCCACCTCTGCCCCCATCCATAGATGATAGG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTGGCTTGGCCTTGCCTaGGGCCCTGCGCCCTACTCG +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPWLGLA*GPAPYS
Trigger: CGAGTAGGGCGCAGGGCCCCAGGCAAGGCCAAGCCA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGGGGGAGTGGATCCTTaGGGAAGGGAGGGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMGGVDP*GREGGS
Trigger: AGAGCCGCCCTCCCTTCCCCAAGGATCCACTCCCCC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTCTGGCATTGGGGCTTaGGCTCTCCTTGCCGTTTTG +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHSGIGA*ALLAVL
Trigger: CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGGCGAGGTCCTCTCCTaGGGTGGTATTTTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLGEVLS*GGIFSP
Trigger: CGGGCTGAAAATACCACCCCAGGAGAGGACCTCGCC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCGGCCTCGGTCTCCATaGAAACACCCGCGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLRPRSP*KHPRSV
Trigger: AACACTCCGCGGGTGTTTCCATGGAGACCGAGGCCG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR TCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGTCCTCACAGGGTGGTaGTTTGAAGCCCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHVLTGW*FEALVF
Trigger: GAAGACAAGGGCTTCAAATCACCACCCTGTGAGGAC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACTTCAGGCCCTGGCTTaGCTGTCTCCTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSLQALA*LSPQQH
Trigger: ATGCTGCTGAGGAGACAGTCAAGCCAGGGCCTGAAG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCATGGGAGCTGTGTGGTaGGAGGTATCCTCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCMGAVW*EVSSAC
Trigger: GCAGGCCGAGGATACCTCTCACCACACAGCTCCCAT...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATGGCCATCCAGCTCGTaGGGGAACCAGACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAWPSSS*GNQTFR
Trigger: GCGGAAGGTCTGGTTCCCTCACGAGCTGGATGGCCA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTGGCAACCCAACTGGTaGTTCAGCAAGCCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTWQPNW*FSKPAL
Trigger: GAGCGCTGGCTTGCTGAATCACCAGTTGGGTTGCCA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGAGCTGCCTCCTTGGTTaGGAGGCATGGGGGCCAATC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLSCLLG*EAWGPI
Trigger: GATTGGCCCCCATGCCTCTCAACCAAGGAGGCAGCT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACCAGTGACTCCGGCCTaGTTCCTTGGGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAPVTPA*FLGGWG
Trigger: TCCCCATCCCCCAAGGAATCAGGCCGGAGTCACTGG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGGTGCTGTCATCCCAGTaGCTCCGGCCTGATTCCTTG +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQVLSSQ*LRPDSL
Trigger: CAAGGAATCAGGCCGGAGTCACTGGGATGACAGCAC...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGCGCTCCGCCACACTTaGAATCACAGGCGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLALRHT*NHRRGS
Trigger: GCTACCACGCCTGTGATTTCAAGTGTGGCGGAGCGC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCCTCACAGGAATGGATaGTGGGGAGGGACAACCCCT +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLPHRNG*WGGTTP
Trigger: AGGGGTTGTCCCTCCCCATCATCCATTCCTGTGAGG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTCTGCCACTTTGCGCTaGAGTAGTCCATTGATGCCT +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPSATLR*SSPLMP
Trigger: AGGCATCAATGGACTACTGCAGCGCAAAGTGGCAGA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCCCAGGCGGTTTAAGTaGTGCAGAGTGAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCPRRFK*CRVRQA
Trigger: GGCCTGCCTCACTCTGCAGCACTTAAACCGCCTGGG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGAGGACCAGCTCCCTGTaGCCACTGATGGTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLRTSSL*PLMVGS
Trigger: ACTCCCAACCATCAGTGGGCACAGGGAGCTGGTCCT...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAATGCTCAGTGGCTCCTaGAGGTGTGGTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSMLSGS*RCGQAA
Trigger: AGCAGCCTGACCACACCTGCAGGAGCCACTGAGCAT...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGAAGGCACCGCTCCTCTaGTTCTCCAAGGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQKAPLL*FSKGWF
Trigger: GAACCAGCCCTTGGAGAAGCAGAGGAGCGGTGCCTT...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGTCTCCCCAGGAGTCTaGCTCCTGAAAGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTVSPGV*LLKVLG
Trigger: CCCCAAGACTTTCAGGAGGCAGACTCCTGGGGAGAC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTCCGGGAAGGGCTTCTaGTCCCAGAATTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLSGKGF*SQNWAC
Trigger: ACAGGCCCAATTCTGGGAGCAGAAGCCCTTCCCGGA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGAGGTATCCTCGGCCTaGATCAGATGCCCCATTTCT +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNEVSSA*IRCPIS
Trigger: AGAAATGGGGCATCTGATGCAGGCCGAGGATACCTC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTGCCCCCTCCTGCACTaGAGCCACCACACTGTCATA +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQCPLLH*SHHTVI
Trigger: TATGACAGTGTGGTGGCTGCAGTGCAGGAGGGGGCA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGGTGTGGGCTCTCTCTaGTCCGGCTCAGTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCGVGSL*SGSVCS
Trigger: TGAGCAGACTGAGCCGGAGCAGAGAGAGCCCACACC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCTCTCTAGTGGGGCATaGAGGGCCAAGCCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQLSSGA*RAKPSK
Trigger: CTTACTGGGCTTGGCCCTGCATGCCCCACTAGAGAG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGGTACAGTGGGTCCTaGCAGGGCTGCATAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGYSGS*QGCIAE
Trigger: TTCAGCTATGCAGCCCTGGCAGGACCCACTGTACCC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGGTGGCACGGCAGGATaGCATCACCCATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCGGTAG*HHPCLQ
Trigger: CTGGAGACATGGGTGATGGCATCCTGCCGTGCCACC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAAAGATCCAGACGCCGTaGAGGGGACGCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAKIQTP*RGRWLG
Trigger: GCCAAGCCAGCGTCCCCTGCACGGCGTCTGGATCTT...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCCGGGATGCTCGATCTaGAGGCCCTTTACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCPGCSI*RPFTRG
Trigger: ACCCCTGGTAAAGGGCCTGCAGATCGAGCATCCCGG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGAGGTGGGGCCCGGGATaGTCGATCTGCAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMRWGPG*SICRPF
Trigger: AAAGGGCCTGCAGATCGAGCATCCCGGGCCCCACCT...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTCCATCCTTTTCCTCTaGTGGGGTGACCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNSILFL*WGDLAC
Trigger: ACAAGCCAGGTCACCCCAGCAGAGGAAAAGGATGGA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGAGCAAAGAGTGCTTCTaGAGGTCCCAGCGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQSKECF*RSQRAA
Trigger: GGCTGCACGCTGGGACCTGCAGAAGCACTCTTTGCT...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATAGGTGCAGGGTCTCTTaGGAACTGGATAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHRCRVS*ELDNPR
Trigger: CCTGGGATTATCCAGTTCCCAAGAGACCCTGCACCT...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCCATGGTGGGCAGAGTaGGCTCAGGGTTTAGCCGGA +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLPWWAE*AQGLAG
Trigger: TCCGGCTAAACCCTGAGCCCACTCTGCCCACCATGG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGCACGATGCCTGTCTTaGCTTTACTATTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHARCLS*LYYCLP
Trigger: GGGCAGGCAATAGTAAAGCCAAGACAGGCATCGTGC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCCAGGTCCTTCTGCGTaGCCACAGGGTAACGCAGGA +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCPGPSA*PQGNAG
Trigger: TCCTGCGTTACCCTGTGGCCACGCAGAAGGACCTGG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCCACCTCCTCCCGTTTaGCCAACTTGCTCACGGCCG +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMPPPPV*PTCSRP
Trigger: CGGCCGTGAGCAAGTTGGCCAAACGGGAGGAGGTGG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTCCTCCGGCTCATCATaGATCTCCTCATCTGAGATG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPSSGSS*ISSSEM
Trigger: CATCTCAGATGAGGAGATCCATGATGAGCCGGAGGA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATGTATGAAATCTGGGTaGAGCTGGGCGCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSCMKSG*SWALLR
Trigger: CCGGAGGAGCGCCCAGCTCCACCCAGATTTCATACA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGCACTATCGGCAGGTTaGCTGGCTTCGAATGGGCCA +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLALSAG*LASNGP
Trigger: TGGCCCATTCGAAGCCAGCCAACCTGCCGATAGTGC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCACTGTGCTGTCATCTaGGCTAAGGCACCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQHCAVI*AKAPLL
Trigger: GAGGAGCGGTGCCTTAGCCCAGATGACAGCACAGTG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGAAAGGGTGTGTGGGTaGCACTGGGTGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLERVCG*HWVGQM
Trigger: CATCTGGCCCACCCAGTGCCACCCACACACCCTTTC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGCCCTCTTCAGGCCCTaGCTTGACTGTCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCALFRP*LDCLLS
Trigger: GCTGAGGAGACAGTCAAGCCAGGGCCTGAAGAGGGC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTTGGGGGTAGGCTCTTaGTTGGCAGTGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQLGVGS*LAVSGE
Trigger: CTCCCCAGACACTGCCAACCAAGAGCCTACCCCCAA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGCTGCATGGGGCTCTaGAACAGACATGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGCMGL*NRHGSC
Trigger: ACAGCTCCCATGTCTGTTCCAGAGCCCCATGCAGCC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGACGCTGTGGCTGCATaGGGCTCTGGAACAGACATG +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSDAVAA*GSGTDM
Trigger: CATGTCTGTTCCAGAGCCCCATGCAGCCACAGCGTC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCATGAGCTTAGGGTCTaGGATAGGACTCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPHELRV*DRTLLS
Trigger: GGACAAGAGAGTCCTATCCCAGACCCTAAGCTCATG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGAAGGGTGCAGGAGTATaGGATTCCGGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLKGAGV*DSGAGV
Trigger: CACACCTGCCCCGGAATCCCATACTCCTGCACCCTT...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGGCTCCGTGGTGGCATaGCTTTTGCTGGCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILGSVVA*LLLASG
Trigger: ACCAGAGGCCAGCAAAAGCCATGCCACCACGGAGCC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTCTGCTCAGGCTCCGTaGTGGCATGGCTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLSAQAP*WHGFCW
Trigger: CCAGCAAAAGCCATGCCACCACGGAGCCTGAGCAGA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCATCAGGATAGGGTGTaGGCTCTCTCTGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLHQDRV*ALSAPA
Trigger: AGCCGGAGCAGAGAGAGCCCACACCCTATCCTGATG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGTGAGGAATCCAGGCTaGGGGCCTTGGTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSVRNPG*GPWSLP
Trigger: TGGAAGTGACCAAGGCCCCCAGCCTGGATTCCTCAC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTCTGAGCACTCCAGGTaGCACGGCAGGATGCCATCA +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQSEHSR*HGRMPS
Trigger: TGATGGCATCCTGCCGTGCCACCTGGAGTGCTCAGA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACAGGGCTGGTTTCAGTTaGGCCATTGGCTGCACAATC +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNRAGFS*AIGCTI
Trigger: GATTGTGCAGCCAATGGCCCAACTGAAACCAGCCCT...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGCTTGTGGTGCTGCGTaGTCGAGGTGGGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQACGAA*SRWGPG
Trigger: TCCCGGGCCCCACCTCGACCACGCAGCACCACAAGC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGAAGAATTCTGGCATTaGGGCTTGGGCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHEEFWH*GLGSPC
Trigger: GCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGGCATAGTGGAATGTTaGGGGAGTCACACATTGCTG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPGIVEC*GSHTLL
Trigger: CAGCAATGTGTGACTCCCCCAACATTCCACTATGCC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGGCGAGGTCCTCTCCTaGGGTGGTATTTTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILGEVLS*GGIFSP
Trigger: CGGGCTGAAAATACCACCCCAGGAGAGGACCTCGCC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTAGTCTGGCAGTAGTCTaGCAGGGCTGCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLSLAVV*QGCSLA
Trigger: AGCCAGTGAGCAGCCCTGCCAGACTACTGCCAGACT...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGAAATCTCGGGGTTGTaGAGGACCTGGGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNEISGL*RTWAKF
Trigger: AAACTTTGCCCAGGTCCTTCACAACCCCGAGATTTC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCAGGGTCTCTATTGCTaGGCAATTGGGAAATCTCGG +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHQGLYC*AIGKSR
Trigger: CCGAGATTTCCCAATTGCTCAGCAATAGAGACCCTG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCTGCCCCAATGTGTGTaGGTAGCACCGAGTCAATGC +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLLPQCV*VAPSQC
Trigger: GCATTGACTCGGTGCTACTCACACACATTGGGGCAG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGCTGCAGTAGTCCATTaGTGCCTGGCAGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLAAVVH*CLAGCL
Trigger: CAGACAACCTGCCAGGCATCAATGGACTACTGCAGC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGGCTGCAGTAGTCCATTaGTGCCTGGCAGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQAAVVH*CLAGCL
Trigger: CAGACAACCTGCCAGGCATCAATGGACTACTGCAGC...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCTCCTTGGCCAGCTCTaGACGTGCCTCCTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPLLGQL*TCLLGS
Trigger: GGAGCCAAGGAGGCACGTTCAGAGCTGGCCAAGGAG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATATGGATCTCCTCATCTaGGATGGTCTGCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHMDLLI*DGLLSL
Trigger: GAGACTGAGCAGACCATCTCAGATGAGGAGATCCAT...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCTGGGGAGCTGTAAGTaGGGCCACAGATTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILLGSCK*GHRLVL
Trigger: GAGGACCAATCTGTGGCCTCACTTACAGCTCCCCAG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAGGAAGGGATGCTTGTaGCTGTGTCAAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSRKGCL*LCQAAG
Trigger: CCCTGCTGCTTGACACAGTCACAAGCATCCCTTCCT...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCTGGGGAGGGCACGCTaGGGACAGAGAGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPLGRAR*GQRGIL
Trigger: CAGAATCCCTCTCTGTCCTCAGCGTGCCCTCCCCAG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTTCTCTTCCAGAGCCTaGATGTTTTGTTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPFSSRA*MFCSRA
Trigger: AGCCCTGGAACAAAACATTCAGGCTCTGGAAGAGAA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGGCAACCCAACTGGTaGTTCAGCAAGCCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLWQPNW*FSKPAL
Trigger: GAGCGCTGGCTTGCTGAATCACCAGTTGGGTTGCCA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACTCTTGTCCTGGGGCTaGAGGAACCCTTTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSLLSWG*RNPLSN
Trigger: GTTGGACAAAGGGTTCCTTCAGCCCCAGGACAAGAG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCCAGGGCTGCATAGCTaGAGGTTGGAGTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLPGLHS*RLECQT
Trigger: AGTCTGACACTCCAACCTTCAGCTATGCAGCCCTGG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCCCATAGGAATGGGGTaGGGAGGACTTGGGGATTGG +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLPIGMG*GGLGDW
Trigger: CCAATCCCCAAGTCCTCCTCACCCCATTCCTATGGG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCGGGCTGCCTCAGCTGTaGTGGACGGACACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPGLPQL*WTDTPQ
Trigger: CTGAGGAGTGTCCGTCCATCACAGCTGAGGCAGCCC...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGTCTCCATCTTCATCTaGGTCGAGGGCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILVSIFI*VEGCLS
Trigger: GCTGAGGCAGCCCTCGACTCAGATGAAGATGGAGAC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGTCTCCATCTTCATCTaGGTCGAGGGCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCVSIFI*VEGCLS
Trigger: GCTGAGGCAGCCCTCGACTCAGATGAAGATGGAGAC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCCTCACAGGAATGGATaGTGGGGAGGGACAACCCCT +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCPHRNG*WGGTTP
Trigger: AGGGGTTGTCCCTCCCCATCATCCATTCCTGTGAGG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACGCACGGCCCTCAGCTaGCTCTCTGTACCGATATCG +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQARTALS*LSVPIS
Trigger: CGATATCGGTACAGAGAGTCAGCTGAGGGCCGTGCG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGGCAGGCCTCCTCAATaGTACGCTTGGCTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMGRPPQ*YAWLSG
Trigger: CCCGGAAAGCCAAGCGTAGCATTGAGGAGGCCTGCC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGAGGCGGTTTAAGTGCTaGAGAGTGAGGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLRRFKC*RVRQAS
Trigger: GGAGGCCTGCCTCACTCTGCAGCACTTAAACCGCCT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGGCCTCTGTCCTTGCTaGCTTGTTCCTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLGLCPC*LVPQGP
Trigger: AGGTCCCTGAGGAACAAGGCAGCAAGGACAGAGGCC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCTAGGCCTCTGTCCTTaGTGCCTTGTTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLLGLCP*CLVPQG
Trigger: TCCCTGAGGAACAAGGCAGCAAGGACAGAGGCCTAG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCTAGGCCTCTGTCCTTaGTGCCTTGTTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQLGLCP*CLVPQG
Trigger: TCCCTGAGGAACAAGGCAGCAAGGACAGAGGCCTAG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCAGGTGTGGTCAGGCTaGTTAGGAATAACGAGGTCT +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNQVWSG*LGITRS
Trigger: AGACCTCGTTATTCCTAAGCAGCCTGACCACACCTG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCCTGGATGTAGGGCATaGCCAGGGGCACTAAACACT +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQPGCRA*PGALNT
Trigger: AGTGTTTAGTGCCCCTGGGCATGCCCTACATCCAGG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCAAGGCACCGCTCCTCTaGTTCTCCAAGGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCKAPLL*FSKGWF
Trigger: GAACCAGCCCTTGGAGAAGCAGAGGAGCGGTGCCTT...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGTCTCCCCAGGAGTCTaGCTCCTGAAAGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILVSPGV*LLKVLG
Trigger: CCCCAAGACTTTCAGGAGGCAGACTCCTGGGGAGAC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCCAGGGAGGTCTCCTTaGTGGGACTCTCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTPGRSP*WDSLLT
Trigger: TGTCAGAAGAGAGTCCCAGCAAGGAGACCTCCCTGG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCCCCAAACTGGAGGGTaGCAAGGCTTTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLPQTGG*QGFLER
Trigger: TCTCTCCAGAAAGCCTTGGCACCCTCCAGTTTGGGG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCCCCAAACTGGAGGGTaGCAAGGCTTTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTPQTGG*QGFLER
Trigger: TCTCTCCAGAAAGCCTTGGCACCCTCCAGTTTGGGG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATAGGCCACATCCTCTCTaGCCCTCCAATACCTATTGT +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHRPHPL*PSNTYC
Trigger: ACAATAGGTATTGGAGGGGCAGAGAGGATGTGGCCT...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTTGTCATACTCGGCTGTaGCCCAAGAGAAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLCHTRL*PKRRVQ
Trigger: CTGCACCCTTCTCTTGGGGCACAGCCGAGTATGACA...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGGGTCCTGCCAGGGCTaGATAGCTGAAGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCGSCQG*IAEGWS
Trigger: ACTCCAACCTTCAGCTATGCAGCCCTGGCAGGACCC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACACCTCCTATCTGGGCTaGAGCTCAGGATGTTACCAT +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNTSYLG*SSGCYH
Trigger: ATGGTAACATCCTGAGCTGCAGCCCAGATAGGAGGT...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGGTGGCACGGCAGGATaGCATCACCCATGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMGGTAG*HHPCLQ
Trigger: CTGGAGACATGGGTGATGGCATCCTGCCGTGCCACC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGCAGGACACACTGGCTaGTCAGGGGAGAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILAGHTG*SGESNV
Trigger: CACATTGCTCTCCCCTGAGCAGCCAGTGTGTCCTGC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGCAGGACACACTGGCTaGTCAGGGGAGAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCAGHTG*SGESNV
Trigger: CACATTGCTCTCCCCTGAGCAGCCAGTGTGTCCTGC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACCGGGATGCTCGATCTaGAGGCCCTTTACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAPGCSI*RPFTRG
Trigger: ACCCCTGGTAAAGGGCCTGCAGATCGAGCATCCCGG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGGGAAGGACTCATCCTaGATCACCACGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCGKDSS*ITTVLL
Trigger: CAGCAGCACCGTGGTGATGCAGGATGAGTCCTTCCC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGCTTGGGCTCTCCTTaGCGTTTTGTGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGLGSP*RFVLSG
Trigger: TCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGGTCTCTTGGGAACTaGATAATCCCAGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGSLGN*IIPGGS
Trigger: GGAGCCACCTGGGATTATCCAGTTCCCAAGAGACCC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCCATGGTGGGCAGAGTaGGCTCAGGGTTTAGCCGGA +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMPWWAE*AQGLAG
Trigger: TCCGGCTAAACCCTGAGCCCACTCTGCCCACCATGG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGTCCCCACGACCACCTaGGAAGATGTAGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTVPTTT*EDVATR
Trigger: CCTTGTTGCTACATCTTCCCAGGTGGTCGTGGGGAC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCAGCCTCCTTCCCATTaGGCAGCACGATGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCQPPSH*AARCLS
Trigger: AGACAGGCATCGTGCTGCCCAATGGGAAGGAGGCTG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCCACCTCCTCCCGTTTaGCCAACTTGCTCACGGCCG +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPPPPPV*PTCSRP
Trigger: CGGCCGTGAGCAAGTTGGCCAAACGGGAGGAGGTGG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCTGGATAGCTGTACTTaGGGGTCCCTCCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQLDSCT*GSLLCS
Trigger: ACTGCAGAGGAGGGACCCCCAAGTACAGCTATCCAG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCCCTGGAACAGAGGGTaGTGTTCCCTGGATAGCTGT +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLPWNRG*CSLDSC
Trigger: ACAGCTATCCAGGGAACACCACCCTCTGTTCCAGGG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGGCTTCTGTTCTGTCTaGGAGCCTCTCTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLGFCSV*EPLCFP
Trigger: AGGGAAGCAGAGAGGCTCCCAGACAGAACAGAAGCC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTAGCCTCCCGGCTCCTTaGAGTTACCTTCAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLSLPAP*SYLQGF
Trigger: GAACCCTTGAAGGTAACTCCAAGGAGCCGGGAGGCT...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTCAGGGGCCTTGCCCTaGAGTCCCAATTCCCGACCC +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPSGALP*SPNSRP
Trigger: GGGTCGGGAATTGGGACTCCAGGGCAAGGCCCCTGA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTATCGGCAGGTTGGCTaGCTTCGAATGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCYRQVG*LRMGQH
Trigger: GTGCTGGCCCATTCGAAGCCAGCCAACCTGCCGATA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGGTGAGTTCAGTCTCTaGCGTTCCATAGACTTTGCC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHGEFSL*RSIDFA
Trigger: GGCAAAGTCTATGGAACGCCAGAGACTGAACTCACC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTTCTGCTCCCAGAATTaGGCCTGTGGGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCFCSQN*ACGLSC
Trigger: GCAGGAGAGCCCACAGGCCCAATTCTGGGAGCAGAA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTTCTGCTCCCAGAATTaGGCCTGTGGGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLFCSQN*ACGLSC
Trigger: GCAGGAGAGCCCACAGGCCCAATTCTGGGAGCAGAA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATTGGTTGGCAGTGTCTaGGGAGGGCACGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQALVGSV*GGHAED
Trigger: GTCCTCAGCGTGCCCTCCCCAGACACTGCCAACCAA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTTGGGGGTAGGCTCTTaGTTGGCAGTGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILLGVGS*LAVSGE
Trigger: CTCCCCAGACACTGCCAACCAAGAGCCTACCCCCAA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGGGAGGTCTCCTTGCTaGGACTCTCTTCTGACAGAG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLGRSPC*DSLLTE
Trigger: CTCTGTCAGAAGAGAGTCCCAGCAAGGAGACCTCCC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGCTCTGGAACAGACATaGGAGCTGTGTGGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLALEQT*ELCGER
Trigger: CCTCTCACCACACAGCTCCCATGTCTGTTCCAGAGC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGAGTTGTCCCATCTGTaGGAGGTGACGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILELSHL*EVTLWL
Trigger: CAGCCACAGCGTCACCTCCCACAGATGGGACAACTC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTAAGGGTGCAGGAGTATaGGATTCCGGGGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILKGAGV*DSGAGV
Trigger: CACACCTGCCCCGGAATCCCATACTCCTGCACCCTT...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTCTGCTCAGGCTCCGTaGTGGCATGGCTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILSAQAP*WHGFCW
Trigger: CCAGCAAAAGCCATGCCACCACGGAGCCTGAGCAGA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTCCGGCCTGATTCCTTaGGGGATGGGGACCTCCTAT +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCSGLIP*GMGTSY
Trigger: ATAGGAGGTCCCCATCCCCCAAGGAATCAGGCCGGA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTCCTCAGAGGGAACCTaGAAGGGGCTTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILSSEGT*KGLGFS
Trigger: GGAGAAGCCAAGCCCCTTCCAGGTTCCCTCTGAGGA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGTCCCTATCATCTATaGATGGGGGCAGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGPYHL*MGAEVG
Trigger: ACCCACCTCTGCCCCCATCCATAGATGATAGGGACC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGGTTTCCCAGTCGTTTaGCAGAGAAGGCAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLGFPVV*QRRQAH
Trigger: GTGGGCTTGCCTTCTCTGCCAAACGACTGGGAAACC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCAAGGTGGGCTCATTTTaGTTTCCCAGTCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPKVGSF*FPSRLA
Trigger: TGCCAAACGACTGGGAAACCAAAATGAGCCCACCTT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTTGGCAAAGGGTCCTCTaGCCTTTGACCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLWQRVL*PLTSEE
Trigger: CTCCTCAGAGGTCAAAGGCCAGAGGACCCTTTGCCA...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGAGGATCTCACTCTGGTaGCAAAGGGTCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLRISLW*QRVLWP
Trigger: AGGCCAGAGGACCCTTTGCCACCAGAGTGAGATCCT...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGATGAACCTCAGAGCTaGTGCTGTCTGCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLDEPQS*CCLHWD
Trigger: ATCCCAGTGCAGACAGCATCAGCTCTGAGGTTCATC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCTGCCCCAATGTGTGTaGGTAGCACCGAGTCAATGC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILLPQCV*VAPSQC
Trigger: GCATTGACTCGGTGCTACTCACACACATTGGGGCAG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGCTTCTCAGGCACGTTaGAAAAGACAACTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHASQAR*KRQLQA
Trigger: AGCTTGGAGTTGTCTTTTTCAACGTGCCTGAGAAGC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCTGCCCACTTTTGCATaGGGAACTGCATCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLLPTFA*GTASPC
Trigger: GCAAGGAGATGCAGTTCCTCATGCAAAAGTGGGCAG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCTGCCCACTTTTGCATaGGGAACTGCATCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTLPTFA*GTASPC
Trigger: GCAAGGAGATGCAGTTCCTCATGCAAAAGTGGGCAG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAACTCCTTGGCCAGCTCTaGACGTGCCTCCTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQLLGQL*TCLLGS
Trigger: GGAGCCAAGGAGGCACGTTCAGAGCTGGCCAAGGAG...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGGCTCCTGTCTATTTTaGCTCTTCCAGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLGSCLF*LFQGPW
Trigger: CCAAGGTCCCTGGAAGAGTCAAAATAGACAGGAGCC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCCTCAAAGTCCTGTGTaGGGTCCTCTGGTGAGGATA +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLPQSPV*GPLVRI
Trigger: TATCCTCACCAGAGGACCTCACACAGGACTTTGAGG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTCATATGTACTTGTATaGAATCTGGGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPSYVLV*NLGGAG
Trigger: CCCAGCTCCACCCAGATTTCATACAAGTACATATGA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGTCACACTCAGTGATTaGAGTGGCCGAGGACACATG +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSVTLSD*SGRGHM
Trigger: CATGTGTCCTCGGCCACTTCAATCACTGAGTGTGAC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTAGGAAGGGATGCTTGTaGCTGTGTCAAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILRKGCL*LCQAAG
Trigger: CCCTGCTGCTTGACACAGTCACAAGCATCCCTTCCT...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGTCCTCACAGGGTGGTaGTTTGAAGCCCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSVLTGW*FEALVF
Trigger: GAAGACAAGGGCTTCAAATCACCACCCTGTGAGGAC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACACAAGCCTTTCCCTATaGTCTCTCCTCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNTSLSL*SLLSSL
Trigger: CAGAGAAGAGAGGAGAGATCATAGGGAAAGGCTTGT...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACAGGAGTCTGCCTCCTaGAAGTCTTGGGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAQESAS*KSWGSD
Trigger: GTCTGAGCCCCAAGACTTTCAGGAGGCAGACTCCTG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCTTCAGGCCCTGGCTTaGCTGTCTCCTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMLQALA*LSPQQH
Trigger: ATGCTGCTGAGGAGACAGTCAAGCCAGGGCCTGAAG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGCCCCTCATCAATGTTaGCAGGTGCTTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAAPHQC*QVLPGP
Trigger: AGGCCCAGGAAGCACCTGTCAACATTGATGAGGGGC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTATTCCTGGAAATCCTTaGAGTCTGAGGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILIPGNP*SLRPRG
Trigger: GCCCCTGGGCCTCAGACTTCAAGGATTTCCAGGAAT...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGAAGCTGGAGGGGAGATaGTCTCAAAGGGAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMKLEGR*SQRESG
Trigger: CCCGCTCTCCCTTTGAGATCATCTCCCCTCCAGCTT...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCCAGGGCTGCATAGCTaGAGGTTGGAGTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILPGLHS*RLECQT
Trigger: AGTCTGACACTCCAACCTTCAGCTATGCAGCCCTGG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGCTGTCATCCCAGTaGCTCCGGCCTGATTCCTTG +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAVLSSQ*LRPDSL
Trigger: CAAGGAATCAGGCCGGAGTCACTGGGATGACAGCAC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCCCATAGGAATGGGGTaGGGAGGACTTGGGGATTGG +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMPIGMG*GGLGDW
Trigger: CCAATCCCCAAGTCCTCCTCACCCCATTCCTATGGG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCTGTTAACTTTGGTTTaGGACACCTCACAGGAATGG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPLLTLV*DTSQEW
Trigger: CCATTCCTGTGAGGTGTCTCAAACCAAAGTTAACAG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCCAAGCCACAGCAGATaGCCACATGCAGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCPSHSR*PHAEKP
Trigger: TGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGGGTTTAGCCGGAGGTaGAGGGTCTCTTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMGFSRR*RVSWEL
Trigger: CAGTTCCCAAGAGACCCTGCACCTCCGGCTAAACCC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTCCAAAAACAGGACTTaGGATCAGAGCCACCATCCA +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNSKNRT*DQSHHP
Trigger: TGGATGGTGGCTCTGATCGCAAGTCCTGTTTTTGGA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTCAATGCGGTCCAAGTaGCGTACCAGCTTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHSMRSK*RTSFQK
Trigger: TTTTTGGAAGCTGGTACGGCACTTGGACCGCATTGA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGTAGCACCGAGTCAATaGGGTCCAAGTGCCGTACCA +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLVAPSQ*GPSAVP
Trigger: TGGTACGGCACTTGGACCGCATTGACTCGGTGCTAC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCCCAGGCGGTTTAAGTaGTGCAGAGTGAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPPRRFK*CRVRQA
Trigger: GGCCTGCCTCACTCTGCAGCACTTAAACCGCCTGGG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTTTTGCATGAGGAACTaGATCTCCTTGCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPFCMRN*ISLLSL
Trigger: CAAGGACAGCAAGGAGATGCAGTTCCTCATGCAAAA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAAGGACCAGCTCCCTGTaGCCACTGATGGTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQARTSSL*PLMVGS
Trigger: ACTCCCAACCATCAGTGGGCACAGGGAGCTGGTCCT...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGGCCTCTGTCCTTGCTaGCTTGTTCCTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMGLCPC*LVPQGP
Trigger: AGGTCCCTGAGGAACAAGGCAGCAAGGACAGAGGCC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGTCTGGGAGCCTCTCTaGTTCCCTCTGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLVWEPL*FPLLLF
Trigger: GAAAAGAAGCAGAGGGAAGCAGAGAGGCTCCCAGAC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGGCCTGTGGGCTCTCCTaGCTCCATAATCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQACGLS*LHNLKD
Trigger: GTCTTTGAGATTATGGAGGCAGGAGAGCCCACAGGC...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCATCTTTCTGAGGTTTaGCAGGTTCTTGGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPHLSEV*QVLGVK
Trigger: CTTTACCCCAAGAACCTGGCAAACCTCAGAAAGATG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATCCTGGACCACATCCTaGCCCCTCCAGTACTTTTCT +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSSWTTS*PLQYFS
Trigger: AGAAAAGTACTGGAGGGGGCAGGATGTGGTCCAGGA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCAGATGTGTCCTCCCATaGCGGGGCAAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCRCVLP*RGKLFL
Trigger: CAGAAAGAGCTTGCCCCGGCATGGGAGGACACATCT...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCACCTTCCAACTCAGCTaGCCCCTCCTGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPTFQLS*PLLHCS
Trigger: GCTGCAGTGCAGGAGGGGGCAGCTGAGTTGGAAGGT...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCGGGCCAATCCCCAGCTaGTCCAAGTGGAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPGPIPS*SKWRLS
Trigger: AGAGAGCCTCCACTTGGAGCAGCTGGGGATTGGCCC...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGGGTCCTGCCAGGGCTaGATAGCTGAAGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMGSCQG*IAEGWS
Trigger: ACTCCAACCTTCAGCTATGCAGCCCTGGCAGGACCC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATCCAGACTCCTGTTCTaGAGCCTCAAGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSSRLLF*SLKAWR
Trigger: TCTCCAAGCCTTGAGGCTGCAGAACAGGAGTCTGGA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGGGAAGGACTCATCCTaGATCACCACGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMGKDSS*ITTVLL
Trigger: CAGCAGCACCGTGGTGATGCAGGATGAGTCCTTCCC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCTCCTTGCCGTTTTGTaGTGTCTGGACACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLLLAVL*CLDTAL
Trigger: CAGGGCTGTGTCCAGACAGCACAAAACGGCAAGGAG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAAGGGTCCTCTGGCCCTaGGGTGTAGGAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQRVLWP*GVGGSL
Trigger: GAGGCTTCCTCCTACACCCCAGGGCCAGAGGACCCT...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300231.6
CDS-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATCTAGGATCTCACTCTaGTGGCAAAGGGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSSRISL*WQRVLW
Trigger: CCAGAGGACCCTTTGCCACCAGAGTGAGATCCTAGA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGGGTCTCTTGGGAACTaGATAATCCCAGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLGSLGN*IIPGGS
Trigger: GGAGCCACCTGGGATTATCCAGTTCCCAAGAGACCC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTAGGTGCAGGGTCTCTTaGGAACTGGATAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTRCRVS*ELDNPR
Trigger: CCTGGGATTATCCAGTTCCCAAGAGACCCTGCACCT...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGTCCCCACGACCACCTaGGAAGATGTAGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILVPTTT*EDVATR
Trigger: CCTTGTTGCTACATCTTCCCAGGTGGTCGTGGGGAC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTCTTGGCTAACTCCTTaGCCAGCTCTGAACGTGCCT +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQSWLTP*PALNVP
Trigger: AGGCACGTTCAGAGCTGGCCAAGGAGTTAGCCAAGA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGGTGCCCACTGATGGTTaGGAGTGGTACAGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQVPTDG*EWYSSL
Trigger: AAGGGAACTGTACCACTCCCAACCATCAGTGGGCAC...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGAGGGTGGTGTTCCCTaGATAGCTGTACTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILEGGVP*IAVLGG
Trigger: ACCCCCAAGTACAGCTATCCAGGGAACACCACCCTC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGAGGGTGGTGTTCCCTaGATAGCTGTACTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLEGGVP*IAVLGG
Trigger: ACCCCCAAGTACAGCTATCCAGGGAACACCACCCTC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCCCTGGAACAGAGGGTaGTGTTCCCTGGATAGCTGT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILPWNRG*CSLDSC
Trigger: ACAGCTATCCAGGGAACACCACCCTCTGTTCCAGGG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATCAGGGGCCTTGCCCTaGAGTCCCAATTCCCGACCC +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQSGALP*SPNSRP
Trigger: GGGTCGGGAATTGGGACTCCAGGGCAAGGCCCCTGA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTTGGCTGGCTTCGAATaGGCCAGCACCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPLAGFE*ASTFRP
Trigger: GGGCCTGAAGGTGCTGGCCCATTCGAAGCCAGCCAA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGGTTTGCCAGGTTCTTaGGGTAAAGTCCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNGLPGS*GKVLKP
Trigger: AGGTTTGAGGACTTTACCCCAAGAACCTGGCAAACC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGGGAGGTCTCCTTGCTaGGACTCTCTTCTGACAGAG +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCGRSPC*DSLLTE
Trigger: CTCTGTCAGAAGAGAGTCCCAGCAAGGAGACCTCCC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGGCTGCATGGGGCTCTaGAACAGACATGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAGCMGL*NRHGSC
Trigger: ACAGCTCCCATGTCTGTTCCAGAGCCCCATGCAGCC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTGGGAGGTGACGCTGTaGCTGCATGGGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPWEVTL*LHGALE
Trigger: TTCCAGAGCCCCATGCAGCCACAGCGTCACCTCCCA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCTCAGGTGGGGAAGCTaGAGGGGAGATGATCTCAAA +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLLRWGS*RGDDLK
Trigger: TTTGAGATCATCTCCCCTCCAGCTTCCCCACCTGAG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTTCATTCTTCATGTGTaGCATGAGCTTAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPFILHV*HELRVW
Trigger: CCAGACCCTAAGCTCATGCCACACATGAAGAATGAA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTTGGCATGGCTTTTGCTaGCCTCTGGTACCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLWHGFC*PLVPLS
Trigger: GCTCAAAGGTACCAGAGGCCAGCAAAAGCCATGCCA...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTTGGGCCTCTTTTTCTaGCTGTTCCCGAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLLGLFF*LFPSPL
Trigger: AAGGGGGCTCGGGAACAGCCAGAAAAAGAGGCCCAA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCCAGGCTGGGGGCCTTaGTCACTTCCAGGTATTCAT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLPGWGP*SLPGIH
Trigger: ATGAATACCTGGAAGTGACCAAGGCCCCCAGCCTGG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCCTATCATCTATGGATaGGGGCAGAGGTGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLPIIYG*GQRWVQ
Trigger: CTGAACCCACCTCTGCCCCCATCCATAGATGATAGG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATATTTCAGCTGCAGGATaGCATAGTGGAATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHISAAG*HSGMLG
Trigger: CCCCAACATTCCACTATGCCATCCTGCAGCTGAAAT...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAAGTCTGGCAGTAGTCTaGCAGGGCTGCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQASLAVV*QGCSLA
Trigger: AGCCAGTGAGCAGCCCTGCCAGACTACTGCCAGACT...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTATAGCAGGGAAGCGTaGGGAGGAGCAGAACACAGC +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCYSREA*GGAEHS
Trigger: GCTGTGTTCTGCTCCTCCCCACGCTTCCCTGCTATA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CAA 72 bp TTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTaGCCGTTTTGTGCTGTCTGGACACAGCCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: FGRILALGLGLS*PFCAVWTQPWD
Trigger: ATCCCAGGGCTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CAA 72 bp AGGGTGGAGCTAGGAAGAACACAAGGTGGGCTCATTTaGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: RVELGRTQGGLI*VSQSFGREGKP
Trigger: GGGCTTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTTCCTAGCTCCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGAAATCTCGGGGTTGTaGAGGACCTGGGCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLEISGL*RTWAKF
Trigger: AAACTTTGCCCAGGTCCTTCACAACCCCGAGATTTC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCAGGGTCTCTATTGCTaGGCAATTGGGAAATCTCGG +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLQGLYC*AIGKSR
Trigger: CCGAGATTTCCCAATTGCTCAGCAATAGAGACCCTG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATTAAGTGCTGCAGAGTaGGGCAGGCCTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQALSAAE*GRPPQC
Trigger: GCATTGAGGAGGCCTGCCTCACTCTGCAGCACTTAA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTTAAGTGCTGCAGAGTaGGGCAGGCCTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMLSAAE*GRPPQC
Trigger: GCATTGAGGAGGCCTGCCTCACTCTGCAGCACTTAA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCTTCAGTGCCTCACTTaGCTCTGTCTTCACCCTCTC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLLQCLT*LCLHPL
Trigger: GAGAGGGTGAAGACAGAGTCAAGTGAGGCACTGAAG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCTCTTCCTCCTCATCTaGAGGGTGTACCTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLLFLLI*RVYLLH
Trigger: ATGGAGGAGGTACACCCTTCAGATGAGGAGGAAGAG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTATGGATCTCCTCATCTaGGATGGTCTGCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLMDLLI*DGLLSL
Trigger: GAGACTGAGCAGACCATCTCAGATGAGGAGATCCAT...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTCATATGTACTTGTATaGAATCTGGGTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHSYVLV*NLGGAG
Trigger: CCCAGCTCCACCCAGATTTCATACAAGTACATATGA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGTTTGTCACACTCAGTaGTTGAAGTGGCCGAGGACA +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLVCHTQ*LKWPRT
Trigger: TGTCCTCGGCCACTTCAATCACTGAGTGTGACAAAC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATTGGTCCTCAGCCACTaGTGTGGCAAAGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSLVLSH*CGKGRK
Trigger: CTTTCTTCCTTTGCCACATCAGTGGCTGAGGACCAA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCTGGGGAGCTGTAAGTaGGGCCACAGATTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPLGSCK*GHRLVL
Trigger: GAGGACCAATCTGTGGCCTCACTTACAGCTCCCCAG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCAAGGCTGTCATCTGTaGTGTCTGTCTGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLQGCHL*CLSVQS
Trigger: ACTCTGCACAGACAGACATCACAGATGACAGCCTTG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCCCCTTCTCCAGTTCTaGGTCACTAGTGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLPLLQF*VTSAVI
Trigger: GATGACAGCACTAGTGACTCAGAACTGGAGAAGGGG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGTTCAAGTCAAAGGATaGCAGGTCAATGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHVQVKG*QVNVPG
Trigger: TCCTGGAACATTGACCTGTCATCCTTTGACTTGAAC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGTAGCACCGAGTCAATaGGGTCCAAGTGCCGTACCA +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMVAPSQ*GPSAVP
Trigger: TGGTACGGCACTTGGACCGCATTGACTCGGTGCTAC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGGCAGGCCTCCTCAATaGTACGCTTGGCTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQGRPPQ*YAWLSG
Trigger: CCCGGAAAGCCAAGCGTAGCATTGAGGAGGCCTGCC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGTCTGGGAGCCTCTCTaGTTCCCTCTGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILVWEPL*FPLLLF
Trigger: GAAAAGAAGCAGAGGGAAGCAGAGAGGCTCCCAGAC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCAGGTGTGGTCAGGCTaGTTAGGAATAACGAGGTCT +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQQVWSG*LGITRS
Trigger: AGACCTCGTTATTCCTAAGCAGCCTGACCACACCTG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGACAGAGAGGGATTCTaGATCTTCAGGAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSDREGF*IFRREA
Trigger: AGCCTCTCTCCTGAAGATGCAGAATCCCTCTCTGTC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTCGGCCTGCATCAGATaGCCCATTTCTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLSACIR*PISSFP
Trigger: TGGGAAGGAAGAAATGGGGCATCTGATGCAGGCCGA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGAGGTATCCTCGGCCTaGATCAGATGCCCCATTTCT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILEVSSA*IRCPIS
Trigger: AGAAATGGGGCATCTGATGCAGGCCGAGGATACCTC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCTGGTTTTATCCTCCTaGACTAGGCTCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILLVLSS*TRLSCS
Trigger: GGAGCAGGAGAGCCTAGTGCAGGAGGATAAAACCAG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCAGTACTTTTCTTCCTaGTCTCTGGCCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMQYFSS*SLALPS
Trigger: GGAGGGCAGGGCCAGAGAGCAGGAAGAAAAGTACTG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGTAGGAGATGTTTCTTaGCACTCCTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLVGDVS*HSWTTS
Trigger: GGATGTGGTCCAGGAGTGGCAAGAAACATCTCCTAC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACGCAGGGGTACTTCTTaGTCATCATCTGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQARRGTS*SSSGPS
Trigger: TGAGGGCCCAGATGATGAGCAAGAAGTACCCCTGCG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAACCTCCTATCTGGGCTaGAGCTCAGGATGTTACCAT +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSTSYLG*SSGCYH
Trigger: ATGGTAACATCCTGAGCTGCAGCCCAGATAGGAGGT...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATGTGGGGGAGCTGGCTaGAATGAGGAGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQACGGAG*NEEKPK
Trigger: CTTTGGCTTCTCCTCATTGCAGCCAGCTCCCCCACA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCAGCAGTCTTGCCACTaGAATGATTCGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTQQSCH*NDSGCR
Trigger: CCTACATCCCGAATCATTGCAGTGGCAAGACTGCTG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGGACCACATAGTAGGATaGACGCACTCGACGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQDHIVG*THSTEE
Trigger: TTCTTCCGTCGAGTGCGTGCATCCTACTATGTGGTC...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGAAATGGAGGAAAGGGTaGAGCTCTGGGCACCTCACT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLKWRKG*SSGHLT
Trigger: AGTGAGGTGCCCAGAGCTGCACCCTTTCCTCCATTT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCTGGATAATCCCAGGTaGCTCCAATCACCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILLDNPR*LQSPSP
Trigger: AGGGGAAGGTGATTGGAGCCACCTGGGATTATCCAG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACCTCAATGCTACGCTTaGCTTTCCGGGAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAPQCYA*LSGRHQ
Trigger: CTGATGCCTCCCGGAAAGCCAAGCGTAGCATTGAGG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTATAGAGGCTCAGCCTaGATGCCCAGGCGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCYRGSA*MPRRFK
Trigger: CTTAAACCGCCTGGGCATCCAGGCTGAGCCTCTATA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCCCACACCCATTTTGTaGAAGAGGGTCAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCPTPIL*KRVSGS
Trigger: TGAGCCACTGACCCTCTTCCACAAAATGGGTGTGGG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGCACGATGCCTGTCTTaGCTTTACTATTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLARCLS*LYYCLP
Trigger: GGGCAGGCAATAGTAAAGCCAAGACAGGCATCGTGC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCAGCCTCCTTCCCATTaGGCAGCACGATGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPQPPSH*AARCLS
Trigger: AGACAGGCATCGTGCTGCCCAATGGGAAGGAGGCTG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTCTTCTCAGTGGGATTaGCTGGTAGCCAGACCACCA +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLSSQWD*LVARPP
Trigger: TGGTGGTCTGGCTACCAGCCAATCCCACTGAGAAGA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGCACAATCTTCTCAGTaGGATTGGCTGGTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSAQSSQ*DWLVAR
Trigger: TCTGGCTACCAGCCAATCCCACTGAGAAGATTGTGC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTCTTGGCTAACTCCTTaGCCAGCTCTGAACGTGCCT +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCSWLTP*PALNVP
Trigger: AGGCACGTTCAGAGCTGGCCAAGGAGTTAGCCAAGA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGTGCCCACTGATGGTTaGGAGTGGTACAGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCVPTDG*EWYSSL
Trigger: AAGGGAACTGTACCACTCCCAACCATCAGTGGGCAC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTTCTTGTCCCAGCCCTaGAACAGAGGGTGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMFLSQP*NRGWCS
Trigger: GGAACACCACCCTCTGTTCCAGGGCTGGGACAAGAA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGGCTTCTGTTCTGTCTaGGAGCCTCTCTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAGFCSV*EPLCFP
Trigger: AGGGAAGCAGAGAGGCTCCCAGACAGAACAGAAGCC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAAAATCTGGGTGGAGCTaGGCGCTCCTCCGGCTCATC +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQKSGWS*ALLRLI
Trigger: GATGAGCCGGAGGAGCGCCCAGCTCCACCCAGATTT...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTGTATGAAATCTGGGTaGAGCTGGGCGCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPCMKSG*SWALLR
Trigger: CCGGAGGAGCGCCCAGCTCCACCCAGATTTCATACA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTTACTTGTATGAAATCTaGGTGGAGCTGGGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLYLYEI*VELGAP
Trigger: AGGAGCGCCCAGCTCCACCCAGATTTCATACAAGTA...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATTGGCTGGCTTCGAATaGGCCAGCACCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQLAGFE*ASTFRP
Trigger: GGGCCTGAAGGTGCTGGCCCATTCGAAGCCAGCCAA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGTGAGTTCAGTCTCTaGCGTTCCATAGACTTTGCC +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGEFSL*RSIDFA
Trigger: GGCAAAGTCTATGGAACGCCAGAGACTGAACTCACC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCCTCAGCCACTGATGTaGCAAAGGAAGAAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHPQPLM*QRKKVC
Trigger: ACAAACTTTCTTCCTTTGCCACATCAGTGGCTGAGG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTAGTGAGGCCACAGATTaGTCCTCAGCCACTGATGTG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILSEATD*SSATDV
Trigger: CACATCAGTGGCTGAGGACCAATCTGTGGCCTCACT...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGAGTGAGGCCACAGATTaGTCCTCAGCCACTGATGTG +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLSEATD*SSATDV
Trigger: CACATCAGTGGCTGAGGACCAATCTGTGGCCTCACT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATAGGGGCACTAAACACTaGAGTTCCATATTGACTGCA +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHRGTKH*SSILTA
Trigger: TGCAGTCAATATGGAACTCCAGTGTTTAGTGCCCCT...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGCCCTCTTCAGGCCCTaGCTTGACTGTCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQALFRP*LDCLLS
Trigger: GCTGAGGAGACAGTCAAGCCAGGGCCTGAAGAGGGC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGGTGCCAAGGCTTTCTaGAGAGAGCTGCTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSGAKAF*RELLRR
Trigger: TCTTCTAAGCAGCTCTCTCCAGAAAGCCTTGGCACC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCGAGTTGTCCCATCTGTaGGAGGTGACGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPELSHL*EVTLWL
Trigger: CAGCCACAGCGTCACCTCCCACAGATGGGACAACTC...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTATCTTCCCACTTTATaGCAATGTCCTCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNYLPTL*QCPPRQ
Trigger: CTGCCTTGGAGGACATTGCCATAAAGTGGGAAGATA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTTTTGTTCCTGGGCCTaGTGTTTCTGTTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTFCSWA*CFCSGA
Trigger: AGCCCCTGAACAGAAACACCAGGCCCAGGAACAAAA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCATGAGCTTAGGGTCTaGGATAGGACTCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTHELRV*DRTLLS
Trigger: GGACAAGAGAGTCCTATCCCAGACCCTAAGCTCATG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTGGCATGGCTTTTGCTaGCCTCTGGTACCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILWHGFC*PLVPLS
Trigger: GCTCAAAGGTACCAGAGGCCAGCAAAAGCCATGCCA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGTTGGAGTGTCAGACTaGAGGCTCTTGGGTGAGATA +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLVGVSD*RLLGEI
Trigger: TATCTCACCCAAGAGCCTCCAGTCTGACACTCCAAC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTCCGGCCTGATTCCTTaGGGGATGGGGACCTCCTAT +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPSGLIP*GMGTSY
Trigger: ATAGGAGGTCCCCATCCCCCAAGGAATCAGGCCGGA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCATCCTTTTCCTCTGCTaGGGTGACCTGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCILFLC*GDLACG
Trigger: ACCACAAGCCAGGTCACCCCAGCAGAGGAAAAGGAT...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGAACTCAAGGCCATTaGTCCTGCCTTGAGTCCATT +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGTQGH*SCLESI
Trigger: AATGGACTCAAGGCAGGACCAATGGCCTTGAGTTCC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGATGGGGGATGGGAAATaGAGGAAAGGGTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLMGDGK*RKGCSS
Trigger: AGAGCTGCACCCTTTCCTCCATTTCCCATCCCCCAT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGAACTCAGACCCTGGTaGTTGAGGAGATGGGGGATG +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAELRPW*LRRWGM
Trigger: CATCCCCCATCTCCTCAACCACCAGGGTCTGAGTTC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCCGTTTTGTGCTGTCTaGACACAGCCCTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMPFCAV*TQPWDV
Trigger: CACATCCCAGGGCTGTGTCCAGACAGCACAAAACGG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGAAGAATTCTGGCATTaGGGCTTGGGCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCEEFWH*GLGSPC
Trigger: GCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGGCATAGTGGAATGTTaGGGGAGTCACACATTGCTG +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSGIVEC*GSHTLL
Trigger: CAGCAATGTGTGACTCCCCCAACATTCCACTATGCC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCGTCCAAGAGCGGGTTTaGAGAGGCAGCCAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPVQERV*RGSQCS
Trigger: GGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGAC...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGGTTTCCCAGTCGTTTaGCAGAGAAGGCAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAGFPVV*QRRQAH
Trigger: GTGGGCTTGCCTTCTCTGCCAAACGACTGGGAAACC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTATAGCAGGGAAGCGTaGGGAGGAGCAGAACACAGC +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMYSREA*GGAEHS
Trigger: GCTGTGTTCTGCTCCTCCCCACGCTTCCCTGCTATA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CAA 72 bp CAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATaGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QDGIVECWGSHT*LGCQMLGCQAV
Trigger: CACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTGGGATTTACCAGGATaGTGGTCTCTAGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLWDLPG*WSLGSH
Trigger: GTGAGATCCTAGAGACCATCATCCTGGTAAATCCCA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGATGAACCTCAGAGCTaGTGCTGTCTGCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQADEPQS*CCLHWD
Trigger: ATCCCAGTGCAGACAGCATCAGCTCTGAGGTTCATC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGGGGGCTTCTCAGATaGCTCTTTTGCCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCWGLLR*LFCLLL
Trigger: GAGAAGAAGGCAAAAGAGTCATCTGAGAAGCCCCCA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTCCCTACCTTGTCTTTaGTCAGCTTTCGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQSLPCL*SAFASL
Trigger: CAGAGAAGCGAAAGCTGATCAAAGACAAGGTAGGGA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACCTCAAAGTCCTGTGTaGGGTCCTCTGGTGAGGATA +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAPQSPV*GPLVRI
Trigger: TATCCTCACCAGAGGACCTCACACAGGACTTTGAGG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTCACACTCAGTGATTaGAGTGGCCGAGGACACATG +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAVTLSD*SGRGHM
Trigger: CATGTGTCCTCGGCCACTTCAATCACTGAGTGTGAC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGTTTGTCACACTCAGTaGTTGAAGTGGCCGAGGACA +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLVCHTQ*LKWPRT
Trigger: TGTCCTCGGCCACTTCAATCACTGAGTGTGACAAAC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTTGGTCCTCAGCCACTaGTGTGGCAAAGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLLVLSH*CGKGRK
Trigger: CTTTCTTCCTTTGCCACATCAGTGGCTGAGGACCAA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCACAGGGTGGTGATTTaGAGCCCTTGTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCHRVVI*SPCLLP
Trigger: TGGAAGAAGACAAGGGCTTCAAATCACCACCCTGTG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTTCGGTCAGGATATCTaGGCACCTCATCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLFGQDI*APHLSE
Trigger: CTCAGAAAGATGAGGTGCTCAGATATCCTGACCGAA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATTCTCTTCCAGAGCCTaGATGTTTTGTTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSFSSRA*MFCSRA
Trigger: AGCCCTGGAACAAAACATTCAGGCTCTGGAAGAGAA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCCCCTTCTCCAGTTCTaGGTCACTAGTGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMPLLQF*VTSAVI
Trigger: GATGACAGCACTAGTGACTCAGAACTGGAGAAGGGG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCCGAACTTCCTCAGTTaGGAGGTCCCTATCATCTAT +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLPNFLS*EVPIIY
Trigger: ATAGATGATAGGGACCTCTCAACTGAGGAAGTTCGG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCCGAACTTCCTCAGTTaGGAGGTCCCTATCATCTAT +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTPNFLS*EVPIIY
Trigger: ATAGATGATAGGGACCTCTCAACTGAGGAAGTTCGG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGGTGGTGAGTACCACTaGCACCCCCAGCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQGGEYH*HPQLCP
Trigger: TGGACAAAGCTGGGGGTGTCAGTGGTACTCACCACC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCGTCACCTCCGTGTCATaGGTAGGGATCAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPVTSVS*VGIRVT
Trigger: GGTGACTCTGATCCCTACTCATGACACGGAGGTGAC...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTGTTGCTGCTGCTCATaGGTTTGTTGGTACCACTCA +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLCCCCS*VCWYHS
Trigger: TGAGTGGTACCAACAAACTCATGAGCAGCAGCAACA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGAGGCTCAGCCTGGATaGCCAGGCGGTTTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQEAQPG*PGGLSA
Trigger: AGCACTTAAACCGCCTGGGCATCCAGGCTGAGCCTC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTTGCCTGCCCACTTTTaGATGAGGAACTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILLPAHF*MRNCIS
Trigger: GGAGATGCAGTTCCTCATGCAAAAGTGGGCAGGCAA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCATTGGGCAGCACGATaGCTGTCTTGGCTTTACTAT +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLHWAAR*LSWLYY
Trigger: ATAGTAAAGCCAAGACAGGCATCGTGCTGCCCAATG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATCGGCCTGCATCAGATaGCCCATTTCTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQASACIR*PISSFP
Trigger: TGGGAAGGAAGAAATGGGGCATCTGATGCAGGCCGA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATGTGATGTCTGTCTGTaGAGAGTATCGAGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSCDVCL*RVSSCP
Trigger: GGGACAACTCGATACTCTGCACAGACAGACATCACA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTCTAAAGCCTTATCCTaGTGTTTCACAGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHSKALS*CFTASF
Trigger: GAATGAGGCTGTGAAACAGCAGGATAAGGCTTTAGA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACTGGTTTTATCCTCCTaGACTAGGCTCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQALVLSS*TRLSCS
Trigger: GGAGCAGGAGAGCCTAGTGCAGGAGGATAAAACCAG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATCCTGGACCACATCCTaGCCCCTCCAGTACTTTTCT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQASWTTS*PLQYFS
Trigger: AGAAAAGTACTGGAGGGGGCAGGATGTGGTCCAGGA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCAATACCTATTGTCCTaGTCAGGAGATGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQQYLLS*SGDVSS
Trigger: GGAGGACACATCTCCTGAGCAGGACAATAGGTATTG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTAGGCCACATCCTCTCTaGCCCTCCAATACCTATTGT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILRPHPL*PSNTYC
Trigger: ACAATAGGTATTGGAGGGGCAGAGAGGATGTGGCCT...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCAAGGTCAGCAGTCTTaGCACTGCAATGATTCGGGA +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLQGQQS*HCNDSG
Trigger: TCCCGAATCATTGCAGTGGCAAGACTGCTGACCTTG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCTCCTTGCCGTTTTGTaGTGTCTGGACACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPLLAVL*CLDTAL
Trigger: CAGGGCTGTGTCCAGACAGCACAAAACGGCAAGGAG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGGGGGAGTCACACATTaGTGGGGTGTCAAATGTTGG +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAGGVTH*WGVKCW
Trigger: CCAACATTTGACACCCCAGCAATGTGTGACTCCCCC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGACAATTAGCAAAGAGTaGTTCTGCAGGTCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQTISKE*FCRSQR
Trigger: ACGCTGGGACCTGCAGAAGCACTCTTTGCTAATTGT...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGCACAATCTTCTCAGTaGGATTGGCTGGTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILAQSSQ*DWLVAR
Trigger: TCTGGCTACCAGCCAATCCCACTGAGAAGATTGTGC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCTCTTCCAGGGACCTTaGCTTTATAGAGGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQLFQGP*LYRGSY
Trigger: GTAAGACCCTCTATAAAGCCAAGGTCCCTGGAAGAG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCTGGATAGCTGTACTTaGGGGTCCCTCCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPLDSCT*GSLLCS
Trigger: ACTGCAGAGGAGGGACCCCCAAGTACAGCTATCCAG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTTCCTCAGGGACCTCTaGGACAAGCTCTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLFLRDL*DKLFLL
Trigger: AAGGAGAAAGAGCTTGTCCCAGAGGTCCCTGAGGAA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCAGCCTCCCGGCTCCTTaGAGTTACCTTCAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPSLPAP*SYLQGF
Trigger: GAACCCTTGAAGGTAACTCCAAGGAGCCGGGAGGCT...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTCCTCCGGCTCATCATaGATCTCCTCATCTGAGATG +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCSSGSS*ISSSEM
Trigger: CATCTCAGATGAGGAGATCCATGATGAGCCGGAGGA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTACTTGTATGAAATCTaGGTGGAGCTGGGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLYLYEI*VELGAP
Trigger: AGGAGCGCCCAGCTCCACCCAGATTTCATACAAGTA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATATCGGCAGGTTGGCTaGCTTCGAATGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQYRQVG*LRMGQH
Trigger: GTGCTGGCCCATTCGAAGCCAGCCAACCTGCCGATA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATTCTTTGCCCACACCTaGTGTGCGCTTAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAFFAHT*CALSVS
Trigger: GGAGACACTAAGCGCACACCAGGTGTGGGCAAAGAA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGACGCTGTGGCTGCATaGGGCTCTGGAACAGACATG +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQDAVAA*GSGTDM
Trigger: CATGTCTGTTCCAGAGCCCCATGCAGCCACAGCGTC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTAGTGAGAGAATGAGCTaGCAGGTGACTTCCTGTCAA +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLSERMS*QVTSCQ
Trigger: TTGACAGGAAGTCACCTGCCAGCTCATTCTCTCACT...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCATCTTTCTGATAGATaGCTGTATCCTTCGGCTCTA +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNHLSDR*LYPSAL
Trigger: TAGAGCCGAAGGATACAGCCATCTATCAGAAAGATG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGTTGGAGTGTCAGACTaGAGGCTCTTGGGTGAGATA +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILVGVSD*RLLGEI
Trigger: TATCTCACCCAAGAGCCTCCAGTCTGACACTCCAAC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATCTGAGCACTCCAGGTaGCACGGCAGGATGCCATCA +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQSEHSR*HGRMPS
Trigger: TGATGGCATCCTGCCGTGCCACCTGGAGTGCTCAGA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAAGGGCTGGTTTCAGTTaGGCCATTGGCTGCACAATC +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQARAGFS*AIGCTI
Trigger: GATTGTGCAGCCAATGGCCCAACTGAAACCAGCCCT...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCGGTCCCTATCATCTATaGATGGGGGCAGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPGPYHL*MGAEVG
Trigger: ACCCACCTCTGCCCCCATCCATAGATGATAGGGACC...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGATCCTTTTCCTCTGCTaGGGTGACCTGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMILFLC*GDLACG
Trigger: ACCACAAGCCAGGTCACCCCAGCAGAGGAAAAGGAT...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTAGAGGTCCCTGGAGTTaGGGATATAATCTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLRGPWS*GYNLPL
Trigger: TAGAGGGAGATTATATCCCCAACTCCAGGGACCTCT...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGCCCTGGGATGTGAATaGTATAAAGCAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAALGCE*YKAGSG
Trigger: CCCAGACCCTGCTTTATACCATTCACATCCCAGGGC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGAGTTTGGAAGAATTCTaGCATTGGGGCTTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLSLEEF*HWGLGS
Trigger: AGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACT...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGGAGTCACACATTGCTaGGGTGTCAAATGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLGVTHC*GVKCWD
Trigger: ATCCCAACATTTGACACCCCAGCAATGTGTGACTCC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGATTTCAGCTGCAGGATaGCATAGTGGAATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQISAAG*HSGMLG
Trigger: CCCCAACATTCCACTATGCCATCCTGCAGCTGAAAT...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGGGATTTACCAGGATaGTGGTCTCTAGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLWDLPG*WSLGSH
Trigger: GTGAGATCCTAGAGACCATCATCCTGGTAAATCCCA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGCTCAATGGTATTGCTaGCCACACGATATAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLAQWYC*PHDIEA
Trigger: AGCCTCTATATCGTGTGGTCAGCAATACCATTGAGC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTGGGGGCTTCTCAGATaGCTCTTTTGCCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMWGLLR*LFCLLL
Trigger: GAGAAGAAGGCAAAAGAGTCATCTGAGAAGCCCCCA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTCCCTACCTTGTCTTTaGTCAGCTTTCGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLSLPCL*SAFASL
Trigger: CAGAGAAGCGAAAGCTGATCAAAGACAAGGTAGGGA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACACAGGGTGGTGATTTaGAGCCCTTGTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAHRVVI*SPCLLP
Trigger: TGGAAGAAGACAAGGGCTTCAAATCACCACCCTGTG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTACAAGCCTTTCCCTATaGTCTCTCCTCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILTSLSL*SLLSSL
Trigger: CAGAGAAGAGAGGAGAGATCATAGGGAAAGGCTTGT...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTTCGGTCAGGATATCTaGGCACCTCATCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILFGQDI*APHLSE
Trigger: CTCAGAAAGATGAGGTGCTCAGATATCCTGACCGAA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGTACTTCCCATTTCCTaGAGGTGTAGAGTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSVLPIS*RCRVRE
Trigger: TTCTCTCACTCTACACCTTCAGGAAATGGGAAGTAC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTTCCTTCTTCTGTTCTaGGGTTCTGTCTTTCAACCC +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQFLLLF*GSVFQP
Trigger: GGGTTGAAAGACAGAACCTCAGAACAGAAGAAGGAA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTTGCTGCTGCTCATaGGTTTGTTGGTACCACTCA +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCCCCCS*VCWYHS
Trigger: TGAGTGGTACCAACAAACTCATGAGCAGCAGCAACA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCTGTTAACTTTGGTTTaGGACACCTCACAGGAATGG +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQLLTLV*DTSQEW
Trigger: CCATTCCTGTGAGGTGTCTCAAACCAAAGTTAACAG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAACCAAGCCACAGCAGATaGCCACATGCAGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQPSHSR*PHAEKP
Trigger: TGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGG...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCGAAGGCAAGCCCACATaGCTACCAGCTTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPEGKPT*LPASGF
Trigger: AAACCCAGAAGCTGGTAGTCATGTGGGCTTGCCTTC...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGGCTTTACTATTGCCTaGCCACTTTTGCATGAGGAA +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLGFTIA*PLLHEE
Trigger: TTCCTCATGCAAAAGTGGGCAGGCAATAGTAAAGCC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAACGCAGGAAGTCCAGATaGCGAAGCTTTTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQRRKSR*RSFSRP
Trigger: GGGCCTAGAAAAGCTTCGGCATCTGGACTTCCTGCG...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGACAGAGAGGGATTCTaGATCTTCAGGAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQADREGF*IFRREA
Trigger: AGCCTCTCTCCTGAAGATGCAGAATCCCTCTCTGTC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCAATACCTATTGTCCTaGTCAGGAGATGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCQYLLS*SGDVSS
Trigger: GGAGGACACATCTCCTGAGCAGGACAATAGGTATTG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAACGCAGGGGTACTTCTTaGTCATCATCTGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQRRGTS*SSSGPS
Trigger: TGAGGGCCCAGATGATGAGCAAGAAGTACCCCTGCG...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTCCAGACTCCTGTTCTaGAGCCTCAAGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPSRLLF*SLKAWR
Trigger: TCTCCAAGCCTTGAGGCTGCAGAACAGGAGTCTGGA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCAGCAGTCTTGCCACTaGAATGATTCGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMQQSCH*NDSGCR
Trigger: CCTACATCCCGAATCATTGCAGTGGCAAGACTGCTG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGACCACATAGTAGGATaGACGCACTCGACGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMDHIVG*THSTEE
Trigger: TTCTTCCGTCGAGTGCGTGCATCCTACTATGTGGTC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATTCAGAACTCAATCTTaGAGGCAGGGAAGGACTCAT +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSFRTQS*RQGRTH
Trigger: ATGAGTCCTTCCCTGCCTGCAAGATTGAGTTCTGAA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATCACTGACGGTATCCTaGCCCAGGTCACATAAATTA +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSSLTVS*PRSHKL
Trigger: TAATTTATGTGACCTGGGGCAGGATACCGTCAGTGA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCCCACACCCATTTTGTaGAAGAGGGTCAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPPTPIL*KRVSGS
Trigger: TGAGCCACTGACCCTCTTCCACAAAATGGGTGTGGG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTTGGGGAGCATTTCCTaGAAAAAGCACACGCACAAT +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTLGSIS*KKHTHN
Trigger: ATTGTGCGTGTGCTTTTTCCAGGAAATGCTCCCCAA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTCCAAGATCTTGTTTTaGGGAGCATTTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNSKILF*GAFPGK
Trigger: TTTTCCAGGAAATGCTCCCCAAAACAAGATCTTGGA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCTCTTCCAGGGACCTTaGCTTTATAGAGGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILLFQGP*LYRGSY
Trigger: GTAAGACCCTCTATAAAGCCAAGGTCCCTGGAAGAG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTTCCTCAGGGACCTCTaGGACAAGCTCTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMFLRDL*DKLFLL
Trigger: AAGGAGAAAGAGCTTGTCCCAGAGGTCCCTGAGGAA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCAAGAGACATGCTCAGTaGCTCCTGCAGGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPKRHAQ*LLQVWS
Trigger: TGACCACACCTGCAGGAGCCACTGAGCATGTCTCTT...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTCTCCTCATCTGAGATaGTCTGCTCAGTCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLSPHLR*SAQSLS
Trigger: ACTCAGAGACTGAGCAGACCATCTCAGATGAGGAGA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTCTCCTCATCTGAGATaGTCTGCTCAGTCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILSPHLR*SAQSLS
Trigger: ACTCAGAGACTGAGCAGACCATCTCAGATGAGGAGA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTAGGGGCACTAAACACTaGAGTTCCATATTGACTGCA +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTRGTKH*SSILTA
Trigger: TGCAGTCAATATGGAACTCCAGTGTTTAGTGCCCCT...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGAGACTTTTCTTCCACTaGGGACTGATGAAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQRLFFH*GLMKGC
Trigger: ACACCCTTTCATCAGTCCCCAGTGGAAGAAAAGTCT...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTTCTTTGCCCACACCTaGTGTGCGCTTAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPFFAHT*CALSVS
Trigger: GGAGACACTAAGCGCACACCAGGTGTGGGCAAAGAA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGGTTTGCCAGGTTCTTaGGGTAAAGTCCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCGLPGS*GKVLKP
Trigger: AGGTTTGAGGACTTTACCCCAAGAACCTGGCAAACC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGGTGCCAAGGCTTTCTaGAGAGAGCTGCTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAGAKAF*RELLRR
Trigger: TCTTCTAAGCAGCTCTCTCCAGAAAGCCTTGGCACC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTCTGTCTTTCAACCCTaGAACTTTATCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNSVFQP*NFIFPL
Trigger: AAGTGGGAAGATAAAGTTCCAGGGTTGAAAGACAGA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTGTGGTGAGGATTCCTaGAAATCCTTGAAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLCGEDS*KSLKSE
Trigger: CTCAGACTTCAAGGATTTCCAGGAATCCTCACCACA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATGCATAGCTGAAGGTTaGAGTGTCAGACTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQACIAEG*SVRLEA
Trigger: AGCCTCCAGTCTGACACTCCAACCTTCAGCTATGCA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCATGGGGGATGGGAAATaGAGGAAAGGGTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPMGDGK*RKGCSS
Trigger: AGAGCTGCACCCTTTCCTCCATTTCCCATCCCCCAT...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTAGTTTGGAAGAATTCTaGCATTGGGGCTTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILSLEEF*HWGLGS
Trigger: AGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACT...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTGGGATGTCAGGCAGTaGCTTATTTTTAACCCATTA +
Preference number: 4 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNWDVRQ*LIFNPL
Trigger: TAATGGGTTAAAAATAAGCCACTGCCTGACATCCCA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTGGGGTGTCAAATGTTaGGATGTCAGGCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMWGVKC*DVRQWL
Trigger: AAGCCACTGCCTGACATCCCAACATTTGACACCCCA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGTAGGAGTTAAGCTGTaGCTCAGCTTCTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTVGVKL*LSFSLF
Trigger: AAAAAGGGAGAAGCTGAGCCACAGCTTAACTCCTAC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
3UTR CAA 72 bp GAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTaGGCAGAGAAGGCAAGCCCACATGACTACCAGCTT +
Preference number: 4 (lower is better)
Translates to: EHKVGSFWFPSR*AEKASPHDYQL
Trigger: AAGCTGGTAGTCATGTGGGCTTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGCTTCTCAGGCACGTTaGAAAAGACAACTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMASQAR*KRQLQA
Trigger: AGCTTGGAGTTGTCTTTTTCAACGTGCCTGAGAAGC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGCTTGGAAATCTTCTTaGGCTCAGGTTTGGTATCTT +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSAWKSS*AQVWYL
Trigger: AAGATACCAAACCTGAGCTCAAGAAGATTTCCAAGC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAACTCTTCCTCCTCATCTaGAGGGTGTACCTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQLFLLI*RVYLLH
Trigger: ATGGAGGAGGTACACCCTTCAGATGAGGAGGAAGAG...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGTTCATCAGGGCTTGTaGTCGCCCCAGGTAAGTACT +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQVHQGL*SPQVST
Trigger: AGTACTTACCTGGGGCGATCACAAGCCCTGATGAAC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGATGTCAGCCAGCCATaGGGGAGTAGTGGGTTCATT +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQDVSQP*GSSGFI
Trigger: AATGAACCCACTACTCCCTCATGGCTGGCTGACATC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAAGAGCTGATGCTGTCTaGACTGGGATTTACCAGGAT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQARADAV*TGIYQD
Trigger: ATCCTGGTAAATCCCAGTGCAGACAGCATCAGCTCT...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCCAGGCTCTAAACTTTaGCCACTCAAGATTAGTAGT +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQPGSKL*PLKISS
Trigger: ACTACTAATCTTGAGTGGGCAAAGTTTAGAGCCTGG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCCAGGCTCTAAACTTTaGCCACTCAAGATTAGTAGT +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTPGSKL*PLKISS
Trigger: ACTACTAATCTTGAGTGGGCAAAGTTTAGAGCCTGG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTCCAAAAACAGGACTTaGGATCAGAGCCACCATCCA +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMSKNRT*DQSHHP
Trigger: TGGATGGTGGCTCTGATCGCAAGTCCTGTTTTTGGA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTCAATGCGGTCCAAGTaGCGTACCAGCTTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMSMRSK*RTSFQK
Trigger: TTTTTGGAAGCTGGTACGGCACTTGGACCGCATTGA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTTTTGCATGAGGAACTaGATCTCCTTGCTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILFCMRN*ISLLSL
Trigger: CAAGGACAGCAAGGAGATGCAGTTCCTCATGCAAAA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCATCTTTCTGAGGTTTaGCAGGTTCTTGGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILHLSEV*QVLGVK
Trigger: CTTTACCCCAAGAACCTGGCAAACCTCAGAAAGATG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTCTAAAGCCTTATCCTaGTGTTTCACAGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQSKALS*CFTASF
Trigger: GAATGAGGCTGTGAAACAGCAGGATAAGGCTTTAGA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTAGGGCTGTGTCTTTTTaGTCTAAGTCTCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILRAVSF*SKSLPF
Trigger: AAAGGGCAGAGACTTAGAGCAAAAAGACACAGCCCT...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAACTGATGGTTGGGAGTaGTACAGTTCCCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQTDGWE*YSSLLG
Trigger: GCCCAGAAGGGAACTGTACCACTCCCAACCATCAGT...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCCTCAGCCACTGATGTaGCAAAGGAAGAAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLPQPLM*QRKKVC
Trigger: ACAAACTTTCTTCCTTTGCCACATCAGTGGCTGAGG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAAGGAGGTGGGTGAGATaGTACCAGCTGATGGCACAT +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQRRWVR*YQLMAH
Trigger: ATGTGCCATCAGCTGGTACCATCTCACCCACCTCCT...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAAGTGAGAGAATGAGCTaGCAGGTGACTTCCTGTCAA +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQASERMS*QVTSCQ
Trigger: TTGACAGGAAGTCACCTGCCAGCTCATTCTCTCACT...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTATCTTCCCACTTTATaGCAATGTCCTCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILYLPTL*QCPPRQ
Trigger: CTGCCTTGGAGGACATTGCCATAAAGTGGGAAGATA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTTCATTCTTCATGTGTaGCATGAGCTTAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILFILHV*HELRVW
Trigger: CCAGACCCTAAGCTCATGCCACACATGAAGAATGAA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCGGAACTCAAGGCCATTaGTCCTGCCTTGAGTCCATT +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPGTQGH*SCLESI
Trigger: AATGGACTCAAGGCAGGACCAATGGCCTTGAGTTCC...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAAGAGGTCCCTGGAGTTaGGGATATAATCTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQARGPWS*GYNLPL
Trigger: TAGAGGGAGATTATATCCCCAACTCCAGGGACCTCT...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGTAGGAGTTAAGCTGTaGCTCAGCTTCTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILVGVKL*LSFSLF
Trigger: AAAAAGGGAGAAGCTGAGCCACAGCTTAACTCCTAC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGAGGAAGAACACAAGGTaGGCTCATTTTGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLRKNTR*AHFGFP
Trigger: TGGGAAACCAAAATGAGCCCACCTTGTGTTCTTCCT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGCTTGGAAATCTTCTTaGGCTCAGGTTTGGTATCTT +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLAWKSS*AQVWYL
Trigger: AAGATACCAAACCTGAGCTCAAGAAGATTTCCAAGC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAACAAGGCTGTCATCTGTaGTGTCTGTCTGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQQGCHL*CLSVQS
Trigger: ACTCTGCACAGACAGACATCACAGATGACAGCCTTG...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTACTTCCCATTTCCTaGAGGTGTAGAGTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAVLPIS*RCRVRE
Trigger: TTCTCTCACTCTACACCTTCAGGAAATGGGAAGTAC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTAGGGATCAGGATAATTaGAATGGGGTGAGTAAAAAC +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTRDQDN*NGVSKN
Trigger: GTTTTTACTCACCCCATTTCAATTATCCTGATCCCT...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATCTGCCACTTTGCGCTaGAGTAGTCCATTGATGCCT +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQSATLR*SSPLMP
Trigger: AGGCATCAATGGACTACTGCAGCGCAAAGTGGCAGA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATTGCCTGCCCACTTTTaGATGAGGAACTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQLPAHF*MRNCIS
Trigger: GGAGATGCAGTTCCTCATGCAAAAGTGGGCAGGCAA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCAGACATCTCTACGTTTaGTGTCTCCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPRHLYV*CLLLFL
Trigger: GAGGAAGAGGAGGAGACAGCAAACGTAGAGATGTCT...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTTATTGCTTTATCCTGTaGTGGCAACAGTTGAATGGT +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLYCFIL*WQQLNG
Trigger: ACCATTCAACTGTTGCCAGCACAGGATAAAGCAATA...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTTTTGCTCTAAGTCTCTaGCCTTTTGTTCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLFALSL*PFVLKP
Trigger: AGGCTTTAGAACAAAAGGGCAGAGACTTAGAGCAAA...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTTTGCTCTAAGTCTCTaGCCTTTTGTTCTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLFALSL*PFVLKP
Trigger: AGGCTTTAGAACAAAAGGGCAGAGACTTAGAGCAAA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAAGGGCTGTGTCTTTTTaGTCTAAGTCTCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQARAVSF*SKSLPF
Trigger: AAAGGGCAGAGACTTAGAGCAAAAAGACACAGCCCT...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAACAAGGTCAGCAGTCTTaGCACTGCAATGATTCGGGA +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQQGQQS*HCNDSG
Trigger: TCCCGAATCATTGCAGTGGCAAGACTGCTGACCTTG...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATTCAGAACTCAATCTTaGAGGCAGGGAAGGACTCAT +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAFRTQS*RQGRTH
Trigger: ATGAGTCCTTCCCTGCCTGCAAGATTGAGTTCTGAA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTTCTCAGGCATCAGATaGTATCCTATTCTAATTTGT +
Preference number: 4 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHFSGIR*YPILIC
Trigger: ACAAATTAGAATAGGATAGCATCTGATGCCTGAGAA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATCACTGACGGTATCCTaGCCCAGGTCACATAAATTA +
Preference number: 4 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQASLTVS*PRSHKL
Trigger: TAATTTATGTGACCTGGGGCAGGATACCGTCAGTGA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTCCAAGATCTTGTTTTaGGGAGCATTTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTSKILF*GAFPGK
Trigger: TTTTCCAGGAAATGCTCCCCAAAACAAGATCTTGGA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGCTTTATCCTGTGCTaGCAACAGTTGAATGGTACA +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCCFILC*QQLNGT
Trigger: TGTACCATTCAACTGTTGCCAGCACAGGATAAAGCA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTCTGTCTTTCAACCCTaGAACTTTATCTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLSVFQP*NFIFPL
Trigger: AAGTGGGAAGATAAAGTTCCAGGGTTGAAAGACAGA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATTTTGTTCCTGGGCCTaGTGTTTCTGTTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQFCSWA*CFCSGA
Trigger: AGCCCCTGAACAGAAACACCAGGCCCAGGAACAAAA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATGCATAGCTGAAGGTTaGAGTGTCAGACTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQCIAEG*SVRLEA
Trigger: AGCCTCCAGTCTGACACTCCAACCTTCAGCTATGCA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCGGAGTCACACATTGCTaGGGTGTCAAATGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPGVTHC*GVKCWD
Trigger: ATCCCAACATTTGACACCCCAGCAATGTGTGACTCC...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCAAGGTGGGCTCATTTTaGTTTCCCAGTCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPKVGSF*FPSRLA
Trigger: TGCCAAACGACTGGGAAACCAAAATGAGCCCACCTT...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTTCCTTCTTCTGTTCTaGGGTTCTGTCTTTCAACCC +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPFLLLF*GSVFQP
Trigger: GGGTTGAAAGACAGAACCTCAGAACAGAAGAAGGAA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAAGAGCTGATGCTGTCTaGACTGGGATTTACCAGGAT +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQRADAV*TGIYQD
Trigger: ATCCTGGTAAATCCCAGTGCAGACAGCATCAGCTCT...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAACATTGGGCAGCACGATaGCTGTCTTGGCTTTACTAT +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQHWAAR*LSWLYY
Trigger: ATAGTAAAGCCAAGACAGGCATCGTGCTGCCCAATG...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAAGACATCTCTACGTTTaGTGTCTCCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQRHLYV*CLLLFL
Trigger: GAGGAAGAGGAGGAGACAGCAAACGTAGAGATGTCT...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATCTCAAAGACTATTaGTTTATCCTGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSNLKDY*FILCWQ
Trigger: TTGCCAGCACAGGATAAAGCAATAGTCTTTGAGATT...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATGTGATGTCTGTCTGTaGAGAGTATCGAGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQCDVCL*RVSSCP
Trigger: GGGACAACTCGATACTCTGCACAGACAGACATCACA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTTGGGGAGCATTTCCTaGAAAAAGCACACGCACAAT +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPLGSIS*KKHTHN
Trigger: ATTGTGCGTGTGCTTTTTCCAGGAAATGCTCCCCAA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTGCTTTATCCTGTGCTaGCAACAGTTGAATGGTACA +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMCFILC*QQLNGT
Trigger: TGTACCATTCAACTGTTGCCAGCACAGGATAAAGCA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCATCTTTCTGATAGATaGCTGTATCCTTCGGCTCTA +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMHLSDR*LYPSAL
Trigger: TAGAGCCGAAGGATACAGCCATCTATCAGAAAGATG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCTCTCACCAGTCTATTaGTCTAAAGAGCTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCLSPVY*SKELQV
Trigger: AACTTGAAGCTCTTTAGACCAATAGACTGGTGAGAG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCAAGAGTCTCAACTGTTaGTTCAAGTCAAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCKSLNC*FKSKDD
Trigger: GTCATCCTTTGACTTGAACCAACAGTTGAGACTCTT...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR TCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGACACTTCTGACTTTTTaGTCTAAGGCTTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLTLLTF*SKALSF
Trigger: GAAAGACAAAGCCTTAGATCAAAAAGTCAGAAGTGT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTATTGCTTTATCCTGTaGTGGCAACAGTTGAATGGT +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMYCFIL*WQQLNG
Trigger: ACCATTCAACTGTTGCCAGCACAGGATAAAGCAATA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTAATCTCAAAGACTATTaGTTTATCCTGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILNLKDY*FILCWQ
Trigger: TTGCCAGCACAGGATAAAGCAATAGTCTTTGAGATT...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGAAATCCCTCCCAGGATaGCAAATAAATAGATTGAGA +
Preference number: 4 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLKSLPG*QINRLR
Trigger: TCTCAATCTATTTATTTGGCATCCTGGGAGGGATTT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAAGACTTTTCTTCCACTaGGGACTGATGAAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQRLFFH*GLMKGC
Trigger: ACACCCTTTCATCAGTCCCCAGTGGAAGAAAAGTCT...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCTCTCACCAGTCTATTaGTCTAAAGAGCTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMLSPVY*SKELQV
Trigger: AACTTGAAGCTCTTTAGACCAATAGACTGGTGAGAG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAAAGAGTCAGGGAGTTTaGAAGAATTCTGGCATTGGG +
Preference number: 4 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQKSQGV*KNSGIG
Trigger: CCCAATGCCAGAATTCTTCCAAACTCCCTGACTCTT...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR TCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGACACTTCTGACTTTTTaGTCTAAGGCTTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMTLLTF*SKALSF
Trigger: GAAAGACAAAGCCTTAGATCAAAAAGTCAGAAGTGT...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTTCTCAGGCATCAGATaGTATCCTATTCTAATTTGT +
Preference number: 4 (lower is better)
Translates to: PKGLSSSHSLKELGEWILFSGIR*YPILIC
Trigger: ACAAATTAGAATAGGATAGCATCTGATGCCTGAGAA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR GCA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGAAATCCCTCCCAGGATaGCAAATAAATAGATTGAGA +
Preference number: 4 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMKSLPG*QINRLR
Trigger: TCTCAATCTATTTATTTGGCATCCTGGGAGGGATTT...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CCA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTGGGATGTCAGGCAGTaGCTTATTTTTAACCCATTA +
Preference number: 4 (lower is better)
Translates to: RRGFSGIRCYPILICPLPWDVRQ*LIFNPL
Trigger: TAATGGGTTAAAAATAAGCCACTGCCTGACATCCCA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp GCGGTGCGCCGGGACTTCGGAGCCCCAGCCCCGGAGTTGTCTCCATaGCAACGCCGTGAGGCCGCGCAGGCTCGGCCTCGGTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: AVRRDFGAPAPELSP*QRREAAQARPRSPW
Trigger: CCATGGAGACCGAGGCCGAGCCTGCGCGGCCTCACGGCGTTGCCATGGAGACAACTCCGGGGCTGGGGCTCCGAAGTCCCGGCGCACCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS TCA 90 bp GGACTTCGGAGCCCCAGCCCCGGAGTTGTCTCCATGGCAACGCCGTaGGGCCGCGCAGGCTCGGCCTCGGTCTCCATGGAAACACCCGCG +
Preference number: 5 (lower is better)
Translates to: GLRSPSPGVVSMATP*GRAGSASVSMETPA
Trigger: CGCGGGTGTTTCCATGGAGACCGAGGCCGAGCCTGCGCGGCCTCACGGCGTTGCCATGGAGACAACTCCGGGGCTGGGGCTCCGAAGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS CCA 90 bp TTCCTCTGCTGGGGTGACCTGGCTTGTGGTGCTGCGTGGTCGAGGTaGGGCCCGGGATGCTCGATCTGCAGGCCCTTTACCAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: FLCWGDLACGAAWSR*GPGCSICRPFTRGG
Trigger: CCCACCCCTGGTAAAGGGCCTGCAGATCGAGCATCCCGGGCCCCACCTCGACCACGCAGCACCACAAGCCAGGTCACCCCAGCAGAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp TGGCAAAGGGTCCTCTGGCCCTGGGGTGTAGGAGGAAGCCTCTCATaGAGGCGGCAGCTCCGGCCTCAGCCGGCAGCTTCAGGGAAGAGT +
Preference number: 5 (lower is better)
Translates to: WQRVLWPWGVGGSLS*RRQLRPQPAASGKS
Trigger: ACTCTTCCCTGAAGCTGCCGGCTGAGGCCGGAGCTGCCGCCTCCATGAGAGGCTTCCTCCTACACCCCAGGGCCAGAGGACCCTTTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300231.6
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCCCAGGGGCTCCGGGTaGCGTGTTCCCGCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNPRGSG*RVPAGV
Trigger: TACCCCTGCGGGAACACGCAACCCGGAGCCCCTGGG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp AACTGCAGGTGGGGTGAGGCTGGGCTCCATACTTGGCCCTGGCTCTaGCCTTGGGGGTACAGTGGGTCCTGCCAGGGCTGCATAGCTGAA +
Preference number: 5 (lower is better)
Translates to: NCRWGEAGLHTWPWL*PWGYSGSCQGCIAE
Trigger: TTCAGCTATGCAGCCCTGGCAGGACCCACTGTACCCCCAAGGCCAGAGCCAGGGCCAAGTATGGAGCCCAGCCTCACCCCACCTGCAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGCCCTGGCTCTGGCCTaGGGGGTACAGTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHALALA*GVQWVL
Trigger: CAGGACCCACTGTACCCCCAAGGCCAGAGCCAGGGC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGACGCTGGCTTGGCCTaGCCTGGGGCCCTGCGCCCT +
Preference number: 5 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLDAGLA*PGALRP
Trigger: AGGGCGCAGGGCCCCAGGCAAGGCCAAGCCAGCGTC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp GCTCCACCTCTAGCCCCTTCTGTGGTGAGGATTCCTGGAAATCCTTaGAGTCTGAGGCCCAGGGGCTCCGGGTTGCGTGTTCCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: APPLAPSVVRIPGNP*SLRPRGSGLRVPAG
Trigger: CCCTGCGGGAACACGCAACCCGGAGCCCCTGGGCCTCAGACTTCAAGGATTTCCAGGAATCCTCACCACAGAAGGGGCTAGAGGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp CTCCTTCTCTGCAGATGTGTTTCGGCCGGCAGCTGCCTCCTTGGTTaGGAGGCATGGGGGCCAATCCCCAGCTGCTCCAAGTGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LLLCRCVSAGSCLLG*EAWGPIPSCSKWRL
Trigger: GAGCCTCCACTTGGAGCAGCTGGGGATTGGCCCCCATGCCTCTCAACCAAGGAGGCAGCTGCCGGCCGAAACACATCTGCAGAGAAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp CTGCACAATCCTCAGAGGGAACCTGGAAGGGGCTTGGCTTCTCCGTaGCTGCCTCTGAGCACTCCAGGTGGCACGGCAGGATGCCATCAC +
Preference number: 5 (lower is better)
Translates to: LHNPQREPGRGLASP*LPLSTPGGTAGCHH
Trigger: GTGATGGCATCCTGCCGTGCCACCTGGAGTGCTCAGAGGCAGCCACGGAGAAGCCAAGCCCCTTCCAGGTTCCCTCTGAGGATTGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCACCACCTCCTCCCGTTaGGCCAACTTGCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPTTSSR*ANLLTA
Trigger: GGCCGTGAGCAAGTTGGCCAAACGGGAGGAGGTGGT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCCCAGGGGCTCCGGGTaGCGTGTTCCCGCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLPRGSG*RVPAGV
Trigger: TACCCCTGCGGGAACACGCAACCCGGAGCCCCTGGG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCTGCAGCCTCAAGGCTaGGAGAGAAGCGCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPLQPQG*ERSAPP
Trigger: TGGCGGAGCGCTTCTCTCCAAGCCTTGAGGCTGCAG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp GAGGCCCAGGGGCTCCGGGTTGCGTGTTCCCGCAGGGGTACTTCTTaGTCATCATCTGGGCCCTCATCTAGGAAAGTGCTTTCCCGTTCC +
Preference number: 5 (lower is better)
Translates to: EAQGLRVACSRRGTS*SSSGPSSRKVLSRS
Trigger: GGAACGGGAAAGCACTTTCCTAGATGAGGGCCCAGATGATGAGCAAGAAGTACCCCTGCGGGAACACGCAACCCGGAGCCCCTGGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp CTCCATACTTGGCCCTGGCTCTGGCCTTGGGGGTACAGTGGGTCCTaGCAGGGCTGCATAGCTGAAGGTTGGAGTGTCAGACTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LHTWPWLWPWGYSGS*QGCIAEGWSVRLEA
Trigger: AGCCTCCAGTCTGACACTCCAACCTTCAGCTATGCAGCCCTGGCAGGACCCACTGTACCCCCAAGGCCAGAGCCAGGGCCAAGTATGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp AGACATACTCGGAGAACTCAGCCACGCCGTCCATGGTGGGCAGAGTaGGCTCAGGGTTTAGCCGGAGGTGCAGGGTCTCTTGGGAACTGG +
Preference number: 5 (lower is better)
Translates to: RHTRRTQPRRPWWAE*AQGLAGGAGSLGNW
Trigger: CCAGTTCCCAAGAGACCCTGCACCTCCGGCTAAACCCTGAGCCCACTCTGCCCACCATGGACGGCGTGGCTGAGTTCTCCGAGTATGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp CCACAGTCTCAGAGACATACTCGGAGAACTCAGCCACGCCGTCCATaGTGGGCAGAGTGGGCTCAGGGTTTAGCCGGAGGTGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PQSQRHTRRTQPRRP*WAEWAQGLAGGAGS
Trigger: AGACCCTGCACCTCCGGCTAAACCCTGAGCCCACTCTGCCCACCATGGACGGCGTGGCTGAGTTCTCCGAGTATGTCTCTGAGACTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp CTGATGGTTGGGAGTGGTACAGTTCCCTTCTGGGCTGGGGGTGTCTaGGGCTCAGAAGACAGCTCCTTCTCCCCACGGATAGCACGGCTC +
Preference number: 5 (lower is better)
Translates to: LMVGSGTVPFWAGGV*GSEDSSFSPRIARL
Trigger: GAGCCGTGCTATCCGTGGGGAGAAGGAGCTGTCTTCTGAGCCCCAGACACCCCCAGCCCAGAAGGGAACTGTACCACTCCCAACCATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp CTGTGGGAGGTGACGCTGTGGCTGCATGGGGCTCTGGAACAGACATaGGAGCTGTGTGGTGAGAGGTATCCTCGGCCTGCATCAGATGCC +
Preference number: 5 (lower is better)
Translates to: LWEVTLWLHGALEQT*ELCGERYPRPASDA
Trigger: GGCATCTGATGCAGGCCGAGGATACCTCTCACCACACAGCTCCCATGTCTGTTCCAGAGCCCCATGCAGCCACAGCGTCACCTCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp GCAAGCCAGCGCTCCACCTCTAGCCCCTTCTGTGGTGAGGATTCCTaGAAATCCTTGAAGTCTGAGGCCCAGGGGCTCCGGGTTGCGTGT +
Preference number: 5 (lower is better)
Translates to: ASQRSTSSPFCGEDS*KSLKSEAQGLRVAC
Trigger: ACACGCAACCCGGAGCCCCTGGGCCTCAGACTTCAAGGATTTCCAGGAATCCTCACCACAGAAGGGGCTAGAGGTGGAGCGCTGGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp AGGGTGTGGGCTCTCTCTGCTCCGGCTCAGTCTGCTCAGGCTCCGTaGTGGCATGGCTTTTGCTGGCCTCTGGTACCTTTGAGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: RVWALSAPAQSAQAP*WHGFCWPLVPLSCV
Trigger: CACACAGCTCAAAGGTACCAGAGGCCAGCAAAAGCCATGCCACCACGGAGCCTGAGCAGACTGAGCCGGAGCAGAGAGAGCCCACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCCGCAGGGGTACTTCTaGCTCATCATCTGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPPQGYF*LIIWAL
Trigger: GAGGGCCCAGATGATGAGCAAGAAGTACCCCTGCGG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCAGCTGCCTCCTTGGTaGAGAGGCATGGGGGCCAAT +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPQLPPW*RGMGAN
Trigger: ATTGGCCCCCATGCCTCTCAACCAAGGAGGCAGCTG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGACGCTGGCTTGGCCTaGCCTGGGGCCCTGCGCCCT +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQADAGLA*PGALRP
Trigger: AGGGCGCAGGGCCCCAGGCAAGGCCAAGCCAGCGTC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTGGGGGAGTGGATCCTaGGGGAAGGGAGGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQWGSGS*GKGGRL
Trigger: GAGCCGCCCTCCCTTCCCCAAGGATCCACTCCCCCA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTGGGGGAGTGGATCCTaGGGGAAGGGAGGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLWGSGS*GKGGRL
Trigger: GAGCCGCCCTCCCTTCCCCAAGGATCCACTCCCCCA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGCCCCAGCCCCGGAGTaGTCTCCATGGCAACGCCGT +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTAPAPE*SPWQRR
Trigger: ACGGCGTTGCCATGGAGACAACTCCGGGGCTGGGGC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS GCA 90 bp ACGCCGTCCATGGTGGGCAGAGTGGGCTCAGGGTTTAGCCGGAGGTaGAGGGTCTCTTGGGAACTGGATAATCCCAGGTGGCTCCAATCA +
Preference number: 5 (lower is better)
Translates to: TPSMVGRVGSGFSRR*RVSWELDNPRWLQS
Trigger: TGATTGGAGCCACCTGGGATTATCCAGTTCCCAAGAGACCCTGCACCTCCGGCTAAACCCTGAGCCCACTCTGCCCACCATGGACGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp CAGTCTCAGAGACATACTCGGAGAACTCAGCCACGCCGTCCATGGTaGGCAGAGTGGGCTCAGGGTTTAGCCGGAGGTGCAGGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: QSQRHTRRTQPRRPW*AEWAQGLAGGAGSL
Trigger: AAGAGACCCTGCACCTCCGGCTAAACCCTGAGCCCACTCTGCCCACCATGGACGGCGTGGCTGAGTTCTCCGAGTATGTCTCTGAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp AGGTACTGTTCTGTCAGGCCACAGGGAGACTTGGGGGTAGGCTCTTaGTTGGCAGTGTCTGGGGAGGGCACGCTGAGGACAGAGAGGGAT +
Preference number: 5 (lower is better)
Translates to: RYCSVRPQGDLGVGS*LAVSGEGTLRTERD
Trigger: ATCCCTCTCTGTCCTCAGCGTGCCCTCCCCAGACACTGCCAACCAAGAGCCTACCCCCAAGTCTCCCTGTGGCCTGACAGAACAGTACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp CTGGTTTCAGTTGGGCCATTGGCTGCACAATCCTCAGAGGGAACCTaGAAGGGGCTTGGCTTCTCCGTGGCTGCCTCTGAGCACTCCAGG +
Preference number: 5 (lower is better)
Translates to: LVSVGPLAAQSSEGT*KGLGFSVAASEHSR
Trigger: CCTGGAGTGCTCAGAGGCAGCCACGGAGAAGCCAAGCCCCTTCCAGGTTCCCTCTGAGGATTGTGCAGCCAATGGCCCAACTGAAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTTGCTGGGCTTGAGGTaGGTAGGCACAGCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPLLGLR*VGTAPE
Trigger: TTCTGGGGCTGTGCCTACCAACCTCAAGCCCAGCAA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTCCTTCTCAGGGGCCTaGCCCTGGAGTCCCAATTCC +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNSFSGA*PWSPNS
Trigger: GGAATTGGGACTCCAGGGCAAGGCCCCTGAGAAGGA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCCGGCAGCTGCCTCCTaGGTTGAGAGGCATGGGGGC +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLPAAAS*VERHGG
Trigger: GCCCCCATGCCTCTCAACCAAGGAGGCAGCTGCCGG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGCCCTGGCTCTGGCCTaGGGGGTACAGTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLALALA*GVQWVL
Trigger: CAGGACCCACTGTACCCCCAAGGCCAGAGCCAGGGC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCCAGCACAGCCCGGCTaGGCTCGCCATTGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLPAQPG*ARHWQG
Trigger: ACCCTGCCAATGGCGAGCCAAGCCGGGCTGTGCTGG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGGGCTGCTCACTGGCTaGCTTGGGGCGAGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLGLLTG*LGARSS
Trigger: AGAGGACCTCGCCCCAAGCAAGCCAGTGAGCAGCCC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp ATAGAGGCTCAGCCTGGATGCCCAGGCGGTTTAAGTGCTGCAGAGTaGGGCAGGCCTCCTCAATGCTACGCTTGGCTTTCCGGGAGGCAT +
Preference number: 5 (lower is better)
Translates to: IEAQPGCPGGLSAAE*GRPPQCYAWLSGRH
Trigger: ATGCCTCCCGGAAAGCCAAGCGTAGCATTGAGGAGGCCTGCCTCACTCTGCAGCACTTAAACCGCCTGGGCATCCAGGCTGAGCCTCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp AAGTCCTGTGTGAGGTCCTCTGGTGAGGATAGGACCAGCTCCCTGTaGCCACTGATGGTTGGGAGTGGTACAGTTCCCTTCTGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: KSCVRSSGEDRTSSL*PLMVGSGTVPFWAG
Trigger: CCCAGCCCAGAAGGGAACTGTACCACTCCCAACCATCAGTGGGCACAGGGAGCTGGTCCTATCCTCACCAGAGGACCTCACACAGGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp GTGGGCAGAGTGGGCTCAGGGTTTAGCCGGAGGTGCAGGGTCTCTTaGGAACTGGATAATCCCAGGTGGCTCCAATCACCTTCCCCTAAG +
Preference number: 5 (lower is better)
Translates to: VGRVGSGFSRRCRVS*ELDNPRWLQSPSPK
Trigger: CTTAGGGGAAGGTGATTGGAGCCACCTGGGATTATCCAGTTCCCAAGAGACCCTGCACCTCCGGCTAAACCCTGAGCCCACTCTGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp GCTCCGGCTCAGTCTGCTCAGGCTCCGTGGTGGCATGGCTTTTGCTaGCCTCTGGTACCTTTGAGCTGTGTGAGCTTTTGTCAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: APAQSAQAPWWHGFC*PLVPLSCVSFCQEP
Trigger: AGGCTCCTGACAAAAGCTCACACAGCTCAAAGGTACCAGAGGCCAGCAAAAGCCATGCCACCACGGAGCCTGAGCAGACTGAGCCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp GGCTCTCTCTGCTCCGGCTCAGTCTGCTCAGGCTCCGTGGTGGCATaGCTTTTGCTGGCCTCTGGTACCTTTGAGCTGTGTGAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: GSLCSGSVCSGSVVA*LLLASGTFELCELL
Trigger: CAAAAGCTCACACAGCTCAAAGGTACCAGAGGCCAGCAAAAGCCATGCCACCACGGAGCCTGAGCAGACTGAGCCGGAGCAGAGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCTTGATGCCTGGCAGGTaGTCTGCCCCAATGTGTGTG +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPLMPGR*SAPMCV
Trigger: CACACACATTGGGGCAGACAACCTGCCAGGCATCAA...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTACCACCTCCTCCCGTTaGGCCAACTTGCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTTTSSR*ANLLTA
Trigger: GGCCGTGAGCAAGTTGGCCAAACGGGAGGAGGTGGT...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATTCACCCTCTCAGGCTaGGCAGGCTTCTCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSFTLSG*AGFSGG
Trigger: GCCCCCAGAGAAGCCTGCCAAGCCTGAGAGGGTGAA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTCTTCAGGCCCTGGCTaGACTGTCTCCTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNSSGPG*TVSSAA
Trigger: TGCTGCTGAGGAGACAGTCAAGCCAGGGCCTGAAGA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACAGCCCCTCATCAATGTaGACAGGTGCTTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNSPSSM*TGASWA
Trigger: GGCCCAGGAAGCACCTGTCAACATTGATGAGGGGCT...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGTGCAGAGTATCGAGTaGTCCCATCTGTGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPVQSIE*SHLWEV
Trigger: CACCTCCCACAGATGGGACAACTCGATACTCTGCAC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCCAGCACAGCCCGGCTaGGCTCGCCATTGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMPAQPG*ARHWQG
Trigger: ACCCTGCCAATGGCGAGCCAAGCCGGGCTGTGCTGG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp AATGGGCCAGCACCTTCAGGCCCGGGCAGGTCATATGTACTTGTATaGAATCTGGGTGGAGCTGGGCGCTCCTCCGGCTCATCATGGATC +
Preference number: 5 (lower is better)
Translates to: NGPAPSGPGRSYVLV*NLGGAGRSSGSSWI
Trigger: GATCCATGATGAGCCGGAGGAGCGCCCAGCTCCACCCAGATTTCATACAAGTACATATGACCTGCCCGGGCCTGAAGGTGCTGGCCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp GCTGTGGCTGCATGGGGCTCTGGAACAGACATGGGAGCTGTGTGGTaGGAGGTATCCTCGGCCTGCATCAGATGCCCCATTTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: AVAAWGSGTDMGAVW*EVSSACIRCPISSF
Trigger: GAAGGAAGAAATGGGGCATCTGATGCAGGCCGAGGATACCTCTCACCACACAGCTCCCATGTCTGTTCCAGAGCCCCATGCAGCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp GAGGGGTCTGTCCTTGGGCACCCAGGGTGGGATGTCAGCCAGCCATaGGGGAGTAGTGGGTTCATTCTTCATGTGTGGCATGAGCTTAGG +
Preference number: 5 (lower is better)
Translates to: EGSVLGHPGWDVSQP*GSSGFILHVWHELR
Trigger: CCTAAGCTCATGCCACACATGAAGAATGAACCCACTACTCCCTCATGGCTGGCTGACATCCCACCCTGGGTGCCCAAGGACAGACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp ACACGATATAGAGGCTCAGCCTGGATGCCCAGGCGGTTTAAGTGCTaGAGAGTGAGGCAGGCCTCCTCAATGCTACGCTTGGCTTTCCGG +
Preference number: 5 (lower is better)
Translates to: TRYRGSAWMPRRFKC*RVRQASSMLRLAFR
Trigger: CCGGAAAGCCAAGCGTAGCATTGAGGAGGCCTGCCTCACTCTGCAGCACTTAAACCGCCTGGGCATCCAGGCTGAGCCTCTATATCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp GTTGGCAGTGTCTGGGGAGGGCACGCTGAGGACAGAGAGGGATTCTaGATCTTCAGGAGAGAGGCTTCGGTCAGGATATCTGAGCACCTC +
Preference number: 5 (lower is better)
Translates to: VGSVWGGHAEDREGF*IFRREASVRISEHL
Trigger: GAGGTGCTCAGATATCCTGACCGAAGCCTCTCTCCTGAAGATGCAGAATCCCTCTCTGTCCTCAGCGTGCCCTCCCCAGACACTGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp TCTGCTCCGGCTCAGTCTGCTCAGGCTCCGTGGTGGCATGGCTTTTaGTGGCCTCTGGTACCTTTGAGCTGTGTGAGCTTTTGTCAGGAG +
Preference number: 5 (lower is better)
Translates to: SAPAQSAQAPWWHGF*WPLVPLSCVSFCQE
Trigger: CTCCTGACAAAAGCTCACACAGCTCAAAGGTACCAGAGGCCAGCAAAAGCCATGCCACCACGGAGCCTGAGCAGACTGAGCCGGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp GAGTGGGCTCAGGGTTTAGCCGGAGGTGCAGGGTCTCTTGGGAACTaGATAATCCCAGGTGGCTCCAATCACCTTCCCCTAAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: EWAQGLAGGAGSLGN*IIPGGSNHLPLSRT
Trigger: TGTCCTGCTTAGGGGAAGGTGATTGGAGCCACCTGGGATTATCCAGTTCCCAAGAGACCCTGCACCTCCGGCTAAACCCTGAGCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp GGACTGATGAAAGGGTGTGTGGGTGGCACTGGGTGGGCCAGATGGTaGAGGAGAAGCCATCTTCACTGTGCTGTCATCTGGGCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: GLMKGCVGGTGWARW*RRSHLHCAVIWAKA
Trigger: TGCCTTAGCCCAGATGACAGCACAGTGAAGATGGCTTCTCCTCCACCATCTGGCCCACCCAGTGCCACCCACACACCCTTTCATCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp GGAGTCTGCCTCCTGAAAGTCTTGGGGCTCAGACTTTTCTTCCACTaGGGACTGATGAAAGGGTGTGTGGGTGGCACTGGGTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: GVCLLKVLGLRLFFH*GLMKGCVGGTGWAR
Trigger: TCTGGCCCACCCAGTGCCACCCACACACCCTTTCATCAGTCCCCAGTGGAAGAAAAGTCTGAGCCCCAAGACTTTCAGGAGGCAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp TCTGTGCAGAGTATCGAGTTGTCCCATCTGTGGGAGGTGACGCTGTaGCTGCATGGGGCTCTGGAACAGACATGGGAGCTGTGTGGTGAG +
Preference number: 5 (lower is better)
Translates to: SVQSIELSHLWEVTL*LHGALEQTWELCGE
Trigger: CTCACCACACAGCTCCCATGTCTGTTCCAGAGCCCCATGCAGCCACAGCGTCACCTCCCACAGATGGGACAACTCGATACTCTGCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACGGCCCACACCCATTTaGTGGAAGAGGGTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSRPTPI*WKRVSG
Trigger: GCCACTGACCCTCTTCCACAAAATGGGTGTGGGCCG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCAGGAACTGCATCTCCTaGCTGTCCTTGACAGGGTTG +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPRNCIS*LSLTGL
Trigger: CAACCCTGTCAAGGACAGCAAGGAGATGCAGTTCCT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATGCTTTGAGGCTCTCCTaGCTATCAGCCCGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHALRLS*LSARCL
Trigger: CAAACAGCGGGCTGATAGCAAGGAGAGCCTCAAAGC...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTCCTTCTCAGGGGCCTaGCCCTGGAGTCCCAATTCC +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLSFSGA*PWSPNS
Trigger: GGAATTGGGACTCCAGGGCAAGGCCCCTGAGAAGGA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAGCACTATCGGCAGGTaGGCTGGCTTCGAATGGGCC +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSSTIGR*AGFEWA
Trigger: GGCCCATTCGAAGCCAGCCAACCTGCCGATAGTGCT...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACTTCTGCTCCCAGAATaGGGCCTGTGGGCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSLLLPE*GLWALL
Trigger: CAGGAGAGCCCACAGGCCCAATTCTGGGAGCAGAAG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCTTGGGGGTAGGCTCTaGGTTGGCAGTGTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLLGGRL*VGSVWG
Trigger: TCCCCAGACACTGCCAACCAAGAGCCTACCCCCAAG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACCGCAGGGGTACTTCTaGCTCATCATCTGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSPQGYF*LIIWAL
Trigger: GAGGGCCCAGATGATGAGCAAGAAGTACCCCTGCGG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGATTCCTGGAAATCCTaGAAGTCTGAGGCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNDSWKS*KSEAQG
Trigger: CCCCTGGGCCTCAGACTTCAAGGATTTCCAGGAATC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCCGGCAGCTGCCTCCTaGGTTGAGAGGCATGGGGGC +
Preference number: 5 (lower is better)
Translates to: RRGFSGIRCYPILICPLPPAAAS*VERHGG
Trigger: GCCCCCATGCCTCTCAACCAAGGAGGCAGCTGCCGG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGCTCCGGCCTGATTCCTaGGGGGATGGGGACCTCCTA +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLLRPDS*GDGDLL
Trigger: TAGGAGGTCCCCATCCCCCAAGGAATCAGGCCGGAG...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTCCAGGCAGGCTaGGAGCTGGAGCTAGGGCCA +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCCLQAG*ELELGP
Trigger: TGGCCCTAGCTCCAGCTCCAAGCCTGCCTGGAGACA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCCATTGACTAGGCCTTaGGACATGGGGCTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNPLTRP*DMGLCP
Trigger: TGGACACAGCCCCATGTCCAAAGGCCTAGTCAATGG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGGGCTTGGGCTCTCCTaGCCGTTTTGTGCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLGLGLS*PFCAVW
Trigger: CCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTCACTGGCTTGCTaGGGGCGAGGTCCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLCSLAC*GRGPLL
Trigger: CAGGAGAGGACCTCGCCCCAAGCAAGCCAGTGAGCA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCCAGGAGAGAATCCCTaGTTCAAGGTGGGCCCGCAC +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTPGENP*FKVGPH
Trigger: GTGCGGGCCCACCTTGAACAAGGGATTCTCTCCTGG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS TCA 90 bp GATGTCTGTCTGTGCAGAGTATCGAGTTGTCCCATCTGTGGGAGGTaGCGCTGTGGCTGCATGGGGCTCTGGAACAGACATGGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: DVCLCRVSSCPICGR*RCGCMGLWNRHGSC
Trigger: ACAGCTCCCATGTCTGTTCCAGAGCCCCATGCAGCCACAGCGTCACCTCCCACAGATGGGACAACTCGATACTCTGCACAGACAGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp TGGCATGAGCTTAGGGTCTGGGATAGGACTCTCTTGTCCTGGGGCTaGAGGAACCCTTTGTCCAACCATCTCAGGTGGGGAAGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: WHELRVWDRTLLSWG*RNPLSNHLRWGSWR
Trigger: CCTCCAGCTTCCCCACCTGAGATGGTTGGACAAAGGGTTCCTTCAGCCCCAGGACAAGAGAGTCCTATCCCAGACCCTAAGCTCATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp ACCACACGATATAGAGGCTCAGCCTGGATGCCCAGGCGGTTTAAGTaGTGCAGAGTGAGGCAGGCCTCCTCAATGCTACGCTTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: TTRYRGSAWMPRRFK*CRVRQASSMLRLAF
Trigger: GAAAGCCAAGCGTAGCATTGAGGAGGCCTGCCTCACTCTGCAGCACTTAAACCGCCTGGGCATCCAGGCTGAGCCTCTATATCGTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp GGATGTAAGAGACATGCTCAGTGGCTCCTGCAGGTGTGGTCAGGCTaGTTAGGAATAACGAGGTCTCCTTCTCAGGGGCCTTGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: GCKRHAQWLLQVWSG*LGITRSPSQGPCPG
Trigger: TCCAGGGCAAGGCCCCTGAGAAGGAGACCTCGTTATTCCTAAGCAGCCTGACCACACCTGCAGGAGCCACTGAGCATGTCTCTTACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp TCTGCACTGGGATTTACCAGGATGATGGTCTCTAGGATCTCACTCTaGTGGCAAAGGGTCCTCTGGCCCTGGGGTGTAGGAGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: SALGFTRMMVSRISL*WQRVLWPWGVGGSL
Trigger: GAGGCTTCCTCCTACACCCCAGGGCCAGAGGACCCTTTGCCACCAGAGTGAGATCCTAGAGACCATCATCCTGGTAAATCCCAGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300231.6
CDS CCA 90 bp AGTGGCTCAATGGTATTGCTGACCACACGATATAGAGGCTCAGCCTaGATGCCCAGGCGGTTTAAGTGCTGCAGAGTGAGGCAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SGSMVLLTTRYRGSA*MPRRFKCCRVRQAS
Trigger: GGAGGCCTGCCTCACTCTGCAGCACTTAAACCGCCTGGGCATCCAGGCTGAGCCTCTATATCGTGTGGTCAGCAATACCATTGAGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp ACATGTTCTTCTTGTCCCAGCCCTGGAACAGAGGGTGGTGTTCCCTaGATAGCTGTACTTGGGGGTCCCTCCTCTGCAGTGTCTAGAGGG +
Preference number: 5 (lower is better)
Translates to: TCSSCPSPGTEGGVP*IAVLGGPSSAVSRG
Trigger: CCCTCTAGACACTGCAGAGGAGGGACCCCCAAGTACAGCTATCCAGGGAACACCACCCTCTGTTCCAGGGCTGGGACAAGAAGAACATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp GAGCTGGGCGCTCCTCCGGCTCATCATGGATCTCCTCATCTGAGATaGTCTGCTCAGTCTCTGAGTAGCCAGGGATTGTCTCATCCTGGA +
Preference number: 5 (lower is better)
Translates to: ELGAPPAHHGSPHLR*SAQSLSSQGLSHPG
Trigger: TCCAGGATGAGACAATCCCTGGCTACTCAGAGACTGAGCAGACCATCTCAGATGAGGAGATCCATGATGAGCCGGAGGAGCGCCCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp CAGCACCTTCAGGCCCGGGCAGGTCATATGTACTTGTATGAAATCTaGGTGGAGCTGGGCGCTCCTCCGGCTCATCATGGATCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: QHLQARAGHMYLYEI*VELGAPPAHHGSPH
Trigger: ATGAGGAGATCCATGATGAGCCGGAGGAGCGCCCAGCTCCACCCAGATTTCATACAAGTACATATGACCTGCCCGGGCCTGAAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp AGAGGTAGCAGGAACAGCACTATCGGCAGGTTGGCTGGCTTCGAATaGGCCAGCACCTTCAGGCCCGGGCAGGTCATATGTACTTGTATG +
Preference number: 5 (lower is better)
Translates to: RGSRNSTIGRLAGFE*ASTFRPGQVICTCM
Trigger: CATACAAGTACATATGACCTGCCCGGGCCTGAAGGTGCTGGCCCATTCGAAGCCAGCCAACCTGCCGATAGTGCTGTTCCTGCTACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp GTGACTGTGTCAAGCAGCAGGGAGCTCTTGCCTGTCTCCTCTGTCTaGGGAGCTGTAAGTGAGGCCACAGATTGGTCCTCAGCCACTGAT +
Preference number: 5 (lower is better)
Translates to: VTVSSSRELLPVSSV*GAVSEATDWSSATD
Trigger: ATCAGTGGCTGAGGACCAATCTGTGGCCTCACTTACAGCTCCCCAGACAGAGGAGACAGGCAAGAGCTCCCTGCTGCTTGACACAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp GCTCAGACTTTTCTTCCACTGGGGACTGATGAAAGGGTGTGTGGGTaGCACTGGGTGGGCCAGATGGTGGAGGAGAAGCCATCTTCACTG +
Preference number: 5 (lower is better)
Translates to: AQTFLPLGTDERVCG*HWVGQMVEEKPSSL
Trigger: CAGTGAAGATGGCTTCTCCTCCACCATCTGGCCCACCCAGTGCCACCCACACACCCTTTCATCAGTCCCCAGTGGAAGAAAAGTCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCCAAGGCTTGGAGAGCTaGAGGAAGCCCCCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCQGLES*RKPPEV
Trigger: CACCTCAGGGGGCTTCCTCAAGCTCTCCAAGCCTTG...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCTGTCCTTGACAGGGTaGAGGACATACATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHLSLTG*RTYMSS
Trigger: GCTGGACATGTATGTCCTCAACCCTGTCAAGGACAG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTTGCTGGGCTTGAGGTaGGTAGGCACAGCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTLLGLR*VGTAPE
Trigger: TTCTGGGGCTGTGCCTACCAACCTCAAGCCCAGCAA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTTGCTCACGGCCGTCTaGGTAGTGGCTTTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQLLTAV*VVALRL
Trigger: GAGCCTCAAAGCCACTACCAAGACGGCCGTGAGCAA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTCCCGTTTGGCCAACTaGCTCACGGCCGTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTSRLAN*LTAVLV
Trigger: TACCAAGACGGCCGTGAGCAAGTTGGCCAAACGGGA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGAGCACTATCGGCAGGTaGGCTGGCTTCGAATGGGCC +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLSTIGR*AGFEWA
Trigger: GGCCCATTCGAAGCCAGCCAACCTGCCGATAGTGCT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGGTGATTTGAAGCCCTaGTCTTCTTCCAGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPGDLKP*SSSSEE
Trigger: CTCCTCACTGGAAGAAGACAAGGGCTTCAAATCACC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCTTCTGCTCCCAGAATaGGGCCTGTGGGCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILLLLPE*GLWALL
Trigger: CAGGAGAGCCCACAGGCCCAATTCTGGGAGCAGAAG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGAGGCCACAGGGAGACTaGGGGGTAGGCTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLRPQGD*GVGSWL
Trigger: CAACCAAGAGCCTACCCCCAAGTCTCCCTGTGGCCT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCTCCGGCCTGATTCCTaGGGGGATGGGGACCTCCTA +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMLRPDS*GDGDLL
Trigger: TAGGAGGTCCCCATCCCCCAAGGAATCAGGCCGGAG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCCTGCCTTGAGTCCATaGACTAGGCCTTTGGACATG +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNPALSP*TRPLDM
Trigger: CATGTCCAAAGGCCTAGTCAATGGACTCAAGGCAGG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCTGCTGCTCATGAGTTaGTTGGTACCACTCACGAGT +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPLLLMS*LVPLTS
Trigger: ACTCGTGAGTGGTACCAACAAACTCATGAGCAGCAG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCTACGAGGGAGGAGGTaGCTCTCTGAGACCCATCCT +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLLRGRR*LSETHP
Trigger: AGGATGGGTCTCAGAGAGCAACCTCCTCCCTCGTAG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTGCTCACTGGCTTGCTaGGGGCGAGGTCCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMCSLAC*GRGPLL
Trigger: CAGGAGAGGACCTCGCCCCAAGCAAGCCAGTGAGCA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp CAGGAGAGAATCCCTTGTTCAAGGTGGGCCCGCACGGCCCTCAGCTaGCTCTCTGTACCGATATCGCCGATCACAATTAGCAAAGAGTGC +
Preference number: 5 (lower is better)
Translates to: QERIPCSRWARTALS*LSVPISPITISKEC
Trigger: GCACTCTTTGCTAATTGTGATCGGCGATATCGGTACAGAGAGTCAGCTGAGGGCCGTGCGGGCCCACCTTGAACAAGGGATTCTCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS GCA 90 bp TGTTCCAAGGCCACATCCTCTCTGCCCCTCCAATACCTATTGTCCTaGTCAGGAGATGTGTCCTCCCATGCCGGGGCAAGCTCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: CSKATSSLPLQYLLS*SGDVSSHAGASSFC
Trigger: ACAGAAAGAGCTTGCCCCGGCATGGGAGGACACATCTCCTGAGCAGGACAATAGGTATTGGAGGGGCAGAGAGGATGTGGCCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp CATAGATGTCTGCATACTGAAAGCTTCTCTCATCAGGATAGGGTGTaGGCTCTCTCTGCTCCGGCTCAGTCTGCTCAGGCTCCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: HRCLHTESFSHQDRV*ALSAPAQSAQAPWW
Trigger: CCACCACGGAGCCTGAGCAGACTGAGCCGGAGCAGAGAGAGCCCACACCCTATCCTGATGAGAGAAGCTTTCAGTATGCAGACATCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCAGGATGTTGAAACCATaGACAGCAAAGAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPRMLKP*TAKRAE
Trigger: CTCTGCCCTCTTTGCTGTCAATGGTTTCAACATCCT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTTCCTCAATGCTACGCTaGGCTTTCCGGGAGGCATCA +
Preference number: 5 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLSSMLR*AFREAS
Trigger: TGATGCCTCCCGGAAAGCCAAGCGTAGCATTGAGGA...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTCCTCAATGCTACGCTaGGCTTTCCGGGAGGCATCA +
Preference number: 5 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQSSMLR*AFREAS
Trigger: TGATGCCTCCCGGAAAGCCAAGCGTAGCATTGAGGA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACGGCCCACACCCATTTaGTGGAAGAGGGTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQARPTPI*WKRVSG
Trigger: GCCACTGACCCTCTTCCACAAAATGGGTGTGGGCCG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATATTGCCTGCCCACTTTaGCATGAGGAACTGCATCTC +
Preference number: 5 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHIACPL*HEELHL
Trigger: GAGATGCAGTTCCTCATGCAAAAGTGGGCAGGCAAT...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGATCTTCTCAGTGGGATaGGCTGGTAGCCAGACCACC +
Preference number: 5 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQIFSVG*AGSQTT
Trigger: GGTGGTCTGGCTACCAGCCAATCCCACTGAGAAGAT...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAATCTTCTCAGTGGGATaGGCTGGTAGCCAGACCACC +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSIFSVG*AGSQTT
Trigger: GGTGGTCTGGCTACCAGCCAATCCCACTGAGAAGAT...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTCCCGTTTGGCCAACTaGCTCACGGCCGTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCSRLAN*LTAVLV
Trigger: TACCAAGACGGCCGTGAGCAAGTTGGCCAAACGGGA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCGGCTTTAGGTCTGGCTaGGAAATCTTCTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPGFRSG*EIFLSS
Trigger: TGAGCTCAAGAAGATTTCCAAGCCAGACCTAAAGCC...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCATCACATGTTCTTCTaGTCCCAGCCCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHHHMFF*SQPWNR
Trigger: TCTGTTCCAGGGCTGGGACAAGAAGAACATGTGATG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGAAGCCTCCCGGCTCCTaGGAGTTACCTTCAAGGGTT +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLKPPGS*ELPSRV
Trigger: AACCCTTGAAGGTAACTCCAAGGAGCCGGGAGGCTT...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTCTTCAGGCCCTGGCTaGACTGTCTCCTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCSSGPG*TVSSAA
Trigger: TGCTGCTGAGGAGACAGTCAAGCCAGGGCCTGAAGA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCTGTGCTGGCAACAGTaGAATGGTACAGCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHLCWQQ*NGTACK
Trigger: CTTACAGGCTGTACCATTCAACTGTTGCCAGCACAG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCTTGGGGGTAGGCTCTaGGTTGGCAGTGTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMLGGRL*VGSVWG
Trigger: TCCCCAGACACTGCCAACCAAGAGCCTACCCCCAAG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGTGCAGAGTATCGAGTaGTCCCATCTGTGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLVQSIE*SHLWEV
Trigger: CACCTCCCACAGATGGGACAACTCGATACTCTGCAC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCAAAGACTCAGGACTCTaGGAGAAGGAGCTATCAGGT +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPKDSGL*EKELSG
Trigger: ACCTGATAGCTCCTTCTCCAAGAGTCCTGAGTCTTT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCTCCTGCTCCTGAGTTaGGTGGTTCTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQLLLLS*VVLFQS
Trigger: GCTCTGGAAGAGAACCACCAAACTCAGGAGCAGGAG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGGAGAGCGGGTCAGTTaGTCCTCTTCCTCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAGERVS*SSSSGG
Trigger: GCCACCAGAGGAAGAGGACAAACTGACCCGCTCTCC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTGTGGTGGCATGGCTTTaGCTGGCCTCTGGTACCTTT +
Preference number: 5 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLVVAWL*LASGTF
Trigger: AAAGGTACCAGAGGCCAGCAAAAGCCATGCCACCAC...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTCAGACTGGAGGCTCTaGGGTGAGATAGGAGATGAA +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNSDWRL*GEIGDE
Trigger: TTCATCTCCTATCTCACCCAAGAGCCTCCAGTCTGA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTAGGAGGACTTGGGGATaGGGCCTCTTTTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTRRTWG*GLFFWL
Trigger: CAGCCAGAAAAAGAGGCCCAATCCCCAAGTCCTCCT...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCTGCAGCCTCAAGGCTaGGAGAGAAGCGCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: RRGFSGIRCYPILICPLPLQPQG*ERSAPP
Trigger: TGGCGGAGCGCTTCTCTCCAAGCCTTGAGGCTGCAG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCCATTGACTAGGCCTTaGGACATGGGGCTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTPLTRP*DMGLCP
Trigger: TGGACACAGCCCCATGTCCAAAGGCCTAGTCAATGG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCTGCTCATGAGTTTGTaGGTACCACTCACGAGTCAC +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNLLMSL*VPLTSH
Trigger: GTGACTCGTGAGTGGTACCAACAAACTCATGAGCAG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGACCAGGACATTCAGTaGTTGCTGCTGCTCATGAGT +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNDQDIQ*LLLLMS
Trigger: ACTCATGAGCAGCAGCAACAACTGAATGTCCTGGTC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCTACGAGGGAGGAGGTaGCTCTCTGAGACCCATCCT +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILLRGRR*LSETHP
Trigger: AGGATGGGTCTCAGAGAGCAACCTCCTCCCTCGTAG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGGGCTTGGGCTCTCCTaGCCGTTTTGTGCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAGLGLS*PFCAVW
Trigger: CCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGAAGAATTCTGGCATaGGGGCTTGGGCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGRILA*GLGLSL
Trigger: CAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCTGGGGTGTCAAATGTaGGGATGTCAGGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQLGCQM*GCQAVA
Trigger: AGCCACTGCCTGACATCCCAACATTTGACACCCCAG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTGTCCAAGAGCGGGTTaGGAGAGGCAGCCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILCPRAG*ERQPVF
Trigger: GAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGGGCTGCTCACTGGCTaGCTTGGGGCGAGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQGLLTG*LGARSS
Trigger: AGAGGACCTCGCCCCAAGCAAGCCAGTGAGCAGCCC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATGGTTTCCCAGTCGTTaGGCAGAGAAGGCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSWFPSR*AEKASP
Trigger: TGGGCTTGCCTTCTCTGCCAAACGACTGGGAAACCA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp GTAGGAAGTCTCCATCTTCATCTGAGTCGAGGGCTGCCTCAGCTGTaGTGGACGGACACTCCTCAGTTTCTGGCGGGACATCAGAATCTG +
Preference number: 5 (lower is better)
Translates to: VGSLHLHLSRGLPQL*WTDTPQFLAGHQNL
Trigger: CAGATTCTGATGTCCCGCCAGAAACTGAGGAGTGTCCGTCCATCACAGCTGAGGCAGCCCTCGACTCAGATGAAGATGGAGACTTCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp TTAGCTCCCTCCAGTATGTGTCCTGTTCCAAGGCCACATCCTCTCTaGCCCTCCAATACCTATTGTCCTGCTCAGGAGATGTGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: LAPSSMCPVPRPHPL*PSNTYCPAQEMCPP
Trigger: GGGAGGACACATCTCCTGAGCAGGACAATAGGTATTGGAGGGGCAGAGAGGATGTGGCCTTGGAACAGGACACATACTGGAGGGAGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCCATCCACCAGGATGTaGAAACCATTGACAGCAAAG +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNPSTRM*KPLTAK
Trigger: CTTTGCTGTCAATGGTTTCAACATCCTGGTGGATGG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTTGATGCCTGGCAGGTaGTCTGCCCCAATGTGTGTG +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCLMPGR*SAPMCV
Trigger: CACACACATTGGGGCAGACAACCTGCCAGGCATCAA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCGCTGCAGTAGTCCATaGATGCCTGGCAGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILRCSSP*MPGRLS
Trigger: AGACAACCTGCCAGGCATCAATGGACTACTGCAGCG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTTCTAGCTCTGCCACTTaGCGCTGCAGTAGTCCATTG +
Preference number: 5 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLSSSAT*RCSSPL
Trigger: CAATGGACTACTGCAGCGCAAAGTGGCAGAGCTAGA...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTAGGAACTGCATCTCCTaGCTGTCCTTGACAGGGTTG +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTRNCIS*LSLTGL
Trigger: CAACCCTGTCAAGGACAGCAAGGAGATGCAGTTCCT...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACGTCTTGGCTTTACTATaGCCTGCCCACTTTTGCATG +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNVLALL*PAHFCM
Trigger: CATGCAAAAGTGGGCAGGCAATAGTAAAGCCAAGAC...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGCCCGCTGTTTGATTTaGCTGGGCTTGAGGTTGGTA +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSARCLI*LGLRLV
Trigger: TACCAACCTCAAGCCCAGCAAAATCAAACAGCGGGC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATTGCTCACGGCCGTCTaGGTAGTGGCTTTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQALLTAV*VVALRL
Trigger: GAGCCTCAAAGCCACTACCAAGACGGCCGTGAGCAA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATTCACCCTCTCAGGCTaGGCAGGCTTCTCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQFTLSG*AGFSGG
Trigger: GCCCCCAGAGAAGCCTGCCAAGCCTGAGAGGGTGAA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCCTTCAGTGCCTCACTaGACTCTGTCTTCACCCTCT +
Preference number: 5 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLPSVPH*TLSSPS
Trigger: AGAGGGTGAAGACAGAGTCAAGTGAGGCACTGAAGG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCGGCTCCTGTCTATTTaGACTCTTCCAGGGACCTTG +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLRLLSI*TLPGTL
Trigger: CAAGGTCCCTGGAAGAGTCAAAATAGACAGGAGCCG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACGGCTCCTGTCTATTTaGACTCTTCCAGGGACCTTG +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSRLLSI*TLPGTL
Trigger: CAAGGTCCCTGGAAGAGTCAAAATAGACAGGAGCCG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGAGCCCCTCATCAATGTaGACAGGTGCTTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMSPSSM*TGASWA
Trigger: GGCCCAGGAAGCACCTGTCAACATTGATGAGGGGCT...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCAGGCCACAGGGAGACTaGGGGGTAGGCTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: RRGFSGIRCYPILICPLPRPQGD*GVGSWL
Trigger: CAACCAAGAGCCTACCCCCAAGTCTCCCTGTGGCCT...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTGGTAGGAGATGTTTCTaGCCACTCCTGGACCACATC +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTGRRCF*PLLDHI
Trigger: GATGTGGTCCAGGAGTGGCAAGAAACATCTCCTACC...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCAGCTGCCTCCTTGGTaGAGAGGCATGGGGGCCAAT +
Preference number: 5 (lower is better)
Translates to: RRGFSGIRCYPILICPLPQLPPW*RGMGAN
Trigger: ATTGGCCCCCATGCCTCTCAACCAAGGAGGCAGCTG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCAGGAGGACTTGGGGATaGGGCCTCTTTTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCRRTWG*GLFFWL
Trigger: CAGCCAGAAAAAGAGGCCCAATCCCCAAGTCCTCCT...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATGTCTCCAGGCAGGCTaGGAGCTGGAGCTAGGGCCA +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQCLQAG*ELELGP
Trigger: TGGCCCTAGCTCCAGCTCCAAGCCTGCCTGGAGACA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACCTGCCTTGAGTCCATaGACTAGGCCTTTGGACATG +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSPALSP*TRPLDM
Trigger: CATGTCCAAAGGCCTAGTCAATGGACTCAAGGCAGG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGCCATTGGTCCTGCCTaGAGTCCATTGACTAGGCCT +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILAIGPA*SPLTRP
Trigger: AGGCCTAGTCAATGGACTCAAGGCAGGACCAATGGC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACCAGGACATTCAGTTGTaGCTGCTGCTCATGAGTTTG +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNQDIQL*LLLMSL
Trigger: CAAACTCATGAGCAGCAGCAACAACTGAATGTCCTG...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTCAATACCAGCATTaGACAGTGCTAGGAGAGGGT +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPIQYQH*TVLGEG
Trigger: ACCCTCTCCTAGCACTGTCAAATGCTGGTATTGAAT...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGGAAGAATTCTGGCATaGGGGCTTGGGCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLGRILA*GLGLSL
Trigger: CAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTGGGGGAGTCACACATaGCTGGGGTGTCAAATGTTG +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTWGSHT*LGCQML
Trigger: CAACATTTGACACCCCAGCAATGTGTGACTCCCCCA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATGTCCAAGAGCGGGTTaGGAGAGGCAGCCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQACPRAG*ERQPVF
Trigger: GAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTCAAGGTGGGCTCATTTaGGTTTCCCAGTCGTTTGGC +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTQGGLI*VSQSFG
Trigger: GCCAAACGACTGGGAAACCAAAATGAGCCCACCTTG...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp CCACACCCATTTTGTGGAAGAGGGTCAGTGGCTCAATGGTATTGCTaGCCACACGATATAGAGGCTCAGCCTGGATGCCCAGGCGGTTTA +
Preference number: 5 (lower is better)
Translates to: PHPFCGRGSVAQWYC*PHDIEAQPGCPGGL
Trigger: TAAACCGCCTGGGCATCCAGGCTGAGCCTCTATATCGTGTGGTCAGCAATACCATTGAGCCACTGACCCTCTTCCACAAAATGGGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp ATGCACGCACTCGACGGAAGAAGTCAAGGTCAGCAGTCTTGCCACTaGAATGATTCGGGATGTAGGCGAGATCCACATATACAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: MHALDGRSQGQQSCH*NDSGCRRDPHIQGH
Trigger: GTGCCCCTGTATATGTGGATCTCGCCTACATCCCGAATCATTGCAGTGGCAAGACTGCTGACCTTGACTTCTTCCGTCGAGTGCGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp TGGCAATGTCCTCCAAGGCAGGGCCTGGCAAAGACTCAGGACTCTTaGAGAAGGAGCTATCAGGTGTCAGAATGTGTTCATCAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: WQCPPRQGLAKTQDS*RRSYQVSECVHQGL
Trigger: CAAGCCCTGATGAACACATTCTGACACCTGATAGCTCCTTCTCCAAGAGTCCTGAGTCTTTGCCAGGCCCTGCCTTGGAGGACATTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTTCCAAAAACAGGACTaGCGATCAGAGCCACCATCC +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLFQKQD*RSEPPS
Trigger: GGATGGTGGCTCTGATCGCAAGTCCTGTTTTTGGAA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTATCTCCTTGCTGTCCTaGACAGGGTTGAGGACATAC +
Preference number: 5 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLISLLS*TGLRTY
Trigger: GTATGTCCTCAACCCTGTCAAGGACAGCAAGGAGAT...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGAGCACGATGCCTGTCTaGGCTTTACTATTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLSTMPV*ALLLPA
Trigger: GGCAGGCAATAGTAAAGCCAAGACAGGCATCGTGCT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATCTCCAAGATCTTGTTTaGGGGAGCATTTCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHLQDLV*GSISWK
Trigger: TTTCCAGGAAATGCTCCCCAAAACAAGATCTTGGAG...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGAGGCCCTCCAAGATCTaGTTTTGGGGAGCATTTCCT +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLRPSKI*FWGAFP
Trigger: AGGAAATGCTCCCCAAAACAAGATCTTGGAGGGCCT...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTTGATTTTGCTGGGCTaGAGGTTGGTAGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLLILLG*RLVGTA
Trigger: GGCTGTGCCTACCAACCTCAAGCCCAGCAAAATCAA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGCCCGCTGTTTGATTTaGCTGGGCTTGAGGTTGGTA +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLARCLI*LGLRLV
Trigger: TACCAACCTCAAGCCCAGCAAAATCAAACAGCGGGC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCTATCAGCCCGCTGTTaGATTTTGCTGGGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILLSARC*ILLGLR
Trigger: CCTCAAGCCCAGCAAAATCAAACAGCGGGCTGATAG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGCTTTGAGGCTCTCCTaGCTATCAGCCCGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMALRLS*LSARCL
Trigger: CAAACAGCGGGCTGATAGCAAGGAGAGCCTCAAAGC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGCATCACATGTTCTTCTaGTCCCAGCCCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQHHMFF*SQPWNR
Trigger: TCTGTTCCAGGGCTGGGACAAGAAGAACATGTGATG...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTCTGTCCTTGCTGCCTaGTTCCTCAGGGACCTCTGG +
Preference number: 5 (lower is better)
Translates to: RRGFSGIRCYPILICPLPSVLAA*FLRDLW
Trigger: CCAGAGGTCCCTGAGGAACAAGGCAGCAAGGACAGA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTCACAGGGTGGTGATTaGAAGCCCTTGTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTSQGGD*KPLSSS
Trigger: GGAAGAAGACAAGGGCTTCAAATCACCACCCTGTGA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CACCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCCACTGGAGTTCCATATaGACTGCAAAGTTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: HLPDPLSKSGFGEAASVPHWSSI*TAKFLR
Trigger: TCTGAGAAACTTTGCAGTCAATATGGAACTCCAGTG...GGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATGCCTCCTGAAAGTCTaGGGGCTCAGACTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSCLLKV*GLRLFF
Trigger: GAAGAAAAGTCTGAGCCCCAAGACTTTCAGGAGGCA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGGCTCTACCACCTCCTaGTGCTCCAGAGTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLGSTTS*CSRVLS
Trigger: AGACAAAACTCTGGAGCACAAGGAGGTGGTAGAGCC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCTCCTGCTCCTGAGTTaGGTGGTTCTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMLLLLS*VVLFQS
Trigger: GCTCTGGAAGAGAACCACCAAACTCAGGAGCAGGAG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGGTAGGAGATGTTTCTaGCCACTCCTGGACCACATC +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLGRRCF*PLLDHI
Trigger: GATGTGGTCCAGGAGTGGCAAGAAACATCTCCTACC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGGAGAGCGGGTCAGTTaGTCCTCTTCCTCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQGERVS*SSSSGG
Trigger: GCCACCAGAGGAAGAGGACAAACTGACCCGCTCTCC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTCAGACTGGAGGCTCTaGGGTGAGATAGGAGATGAA +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLSDWRL*GEIGDE
Trigger: TTCATCTCCTATCTCACCCAAGAGCCTCCAGTCTGA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTCCAGGCTGGGGGCCTaGGTCACTTCCAGGTATTCA +
Preference number: 5 (lower is better)
Translates to: RRGFSGIRCYPILICPLPSRLGA*VTSRYS
Trigger: TGAATACCTGGAAGTGACCAAGGCCCCCAGCCTGGA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGTTTCAGTTGGGCCATaGGCTGCACAATCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILVSVGP*AAQSSE
Trigger: CTCTGAGGATTGTGCAGCCAATGGCCCAACTGAAAC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGCCATTGGTCCTGCCTaGAGTCCATTGACTAGGCCT +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMAIGPA*SPLTRP
Trigger: AGGCCTAGTCAATGGACTCAAGGCAGGACCAATGGC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCACTGCTCATGAGTTTGTaGGTACCACTCACGAGTCAC +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSLLMSL*VPLTSH
Trigger: GTGACTCGTGAGTGGTACCAACAAACTCATGAGCAG...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGGGGGAGTCACACATaGCTGGGGTGTCAAATGTTG +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLWGSHT*LGCQML
Trigger: CAACATTTGACACCCCAGCAATGTGTGACTCCCCCA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp CCTCTTCCTCTTCCACAGCTCTCTCTCCAGACAAGCCTTTCCCTATaGTCTCTCCTCTCTTCTCTGACTCCCCAGTCACAGAGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: PLPLPQLSLQTSLSL*SLLSSLTPQSQRSP
Trigger: AGGACTTCTCTGTGACTGGGGAGTCAGAGAAGAGAGGAGAGATCATAGGGAAAGGCTTGTCTGGAGAGAGAGCTGTGGAAGAGGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp TCAGGAGAGAGGCTTCGGTCAGGATATCTGAGCACCTCATCTTTCTaGGGTTTGCCAGGTTCTTGGGGTAAAGTCCTCAAACCTCCGGGA +
Preference number: 5 (lower is better)
Translates to: SGERLRSGYLSTSSF*GLPGSWGKVLKPPG
Trigger: TCCCGGAGGTTTGAGGACTTTACCCCAAGAACCTGGCAAACCTCAGAAAGATGAGGTGCTCAGATATCCTGACCGAAGCCTCTCTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp AGTAGCCAGGGATTGTCTCATCCTGGATGTAAGAGACATGCTCAGTaGCTCCTGCAGGTGTGGTCAGGCTGCTTAGGAATAACGAGGTCT +
Preference number: 5 (lower is better)
Translates to: SSQGLSHPGCKRHAQ*LLQVWSGCLGITRS
Trigger: AGACCTCGTTATTCCTAAGCAGCCTGACCACACCTGCAGGAGCCACTGAGCATGTCTCTTACATCCAGGATGAGACAATCCCTGGCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp CAAAGGGGCAGCCACTATGTTAGTGGGGTAGGTGAGTTCAGTCTCTaGCGTTCCATAGACTTTGCCAGAGGTAGCAGGAACAGCACTATC +
Preference number: 5 (lower is better)
Translates to: QRGSHYVSGVGEFSL*RSIDFARGSRNSTI
Trigger: GATAGTGCTGTTCCTGCTACCTCTGGCAAAGTCTATGGAACGCCAGAGACTGAACTCACCTACCCCACTAACATAGTGGCTGCCCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGTCTATTGCTGAGCAATaGGGAAATCTCGGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLSIAEQ*GNLGVV
Trigger: CACAACCCCGAGATTTCCCAATTGCTCAGCAATAGA...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTATCCCAGGGTCTCTATaGCTGAGCAATTGGGAAATC +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTIPGSL*LSNWEI
Trigger: GATTTCCCAATTGCTCAGCAATAGAGACCCTGGGAT...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCCATCCACCAGGATGTaGAAACCATTGACAGCAAAG +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLPSTRM*KPLTAK
Trigger: CTTTGCTGTCAATGGTTTCAACATCCTGGTGGATGG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTTCCAAAAACAGGACTaGCGATCAGAGCCACCATCC +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLFQKQD*RSEPPS
Trigger: GGATGGTGGCTCTGATCGCAAGTCCTGTTTTTGGAA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCGCTGCAGTAGTCCATaGATGCCTGGCAGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: RRGFSGIRCYPILICPLPRCSSP*MPGRLS
Trigger: AGACAACCTGCCAGGCATCAATGGACTACTGCAGCG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTCTAGCTCTGCCACTTaGCGCTGCAGTAGTCCATTG +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMSSSAT*RCSSPL
Trigger: CAATGGACTACTGCAGCGCAAAGTGGCAGAGCTAGA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGAGCTTCTCAGGCACGTaGAAAAAGACAACTCCAAGC +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLSFSGT*KKTTPS
Trigger: GCTTGGAGTTGTCTTTTTCAACGTGCCTGAGAAGCT...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGTCTTGGCTTTACTATaGCCTGCCCACTTTTGCATG +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLVLALL*PAHFCM
Trigger: CATGCAAAAGTGGGCAGGCAATAGTAAAGCCAAGAC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGAGGCCCTCCAAGATCTaGTTTTGGGGAGCATTTCCT +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLRPSKI*FWGAFP
Trigger: AGGAAATGCTCCCCAAAACAAGATCTTGGAGGGCCT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCTATCAGCCCGCTGTTaGATTTTGCTGGGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMLSARC*ILLGLR
Trigger: CCTCAAGCCCAGCAAAATCAAACAGCGGGCTGATAG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCCTTCAGTGCCTCACTaGACTCTGTCTTCACCCTCT +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMPSVPH*TLSSPS
Trigger: AGAGGGTGAAGACAGAGTCAAGTGAGGCACTGAAGG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGGGCTTTAGGTCTGGCTaGGAAATCTTCTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQGFRSG*EIFLSS
Trigger: TGAGCTCAAGAAGATTTCCAAGCCAGACCTAAAGCC...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATCTGTCCTTGCTGCCTaGTTCCTCAGGGACCTCTGG +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQSVLAA*FLRDLW
Trigger: CCAGAGGTCCCTGAGGAACAAGGCAGCAAGGACAGA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCAAAAACCCTCAGCTTTaGTCGCGTCCTCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCKNPQL*SRPLPP
Trigger: AGGAGGAAGAGGACGCGACAAAAGCTGAGGGTTTTT...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTCACAGGGTGGTGATTaGAAGCCCTTGTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCSQGGD*KPLSSS
Trigger: GGAAGAAGACAAGGGCTTCAAATCACCACCCTGTGA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGGGCTCTACCACCTCCTaGTGCTCCAGAGTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMGSTTS*CSRVLS
Trigger: AGACAAAACTCTGGAGCACAAGGAGGTGGTAGAGCC...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTTCTGTTCCAGGGCCTaGTCTTTTTCTTCTAAGTCT +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNFCSRA*SFSSKS
Trigger: AGACTTAGAAGAAAAAGACAAGGCCCTGGAACAGAA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGCAGAGCCTGAATGTTTaGTTCCAGGGCTTCATCCTT +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLQSLNV*FQGFIL
Trigger: AAGGATGAAGCCCTGGAACAAAACATTCAGGCTCTG...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTGGCCTCTGGTACCTTaGAGCTGTGTGAGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILWPLVP*SCVSFC
Trigger: ACAAAAGCTCACACAGCTCAAAGGTACCAGAGGCCA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATCCAGGCTGGGGGCCTaGGTCACTTCCAGGTATTCA +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQSRLGA*VTSRYS
Trigger: TGAATACCTGGAAGTGACCAAGGCCCCCAGCCTGGA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGCCGAACTTCCTCAGTaGAGAGGTCCCTATCATCTA +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILAELPQ*RGPYHL
Trigger: TAGATGATAGGGACCTCTCAACTGAGGAAGTTCGGC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGCCGAACTTCCTCAGTaGAGAGGTCCCTATCATCTA +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCAELPQ*RGPYHL
Trigger: TAGATGATAGGGACCTCTCAACTGAGGAAGTTCGGC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGACCAGGACATTCAGTaGTTGCTGCTGCTCATGAGT +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCDQDIQ*LLLLMS
Trigger: ACTCATGAGCAGCAGCAACAACTGAATGTCCTGGTC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCACAAGGTGGGCTCATTTaGGTTTCCCAGTCGTTTGGC +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAQGGLI*VSQSFG
Trigger: GCCAAACGACTGGGAAACCAAAATGAGCCCACCTTG...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp CCTCAGCCACTGATGTGGCAAAGGAAGAAAGTTTGTCACACTCAGTaGTTGAAGTGGCCGAGGACACATGTTCCTCTTCAGCCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: PQPLMWQRKKVCHTQ*LKWPRTHVPLQPKG
Trigger: CCCCTTTGGCTGAAGAGGAACATGTGTCCTCGGCCACTTCAATCACTGAGTGTGACAAACTTTCTTCCTTTGCCACATCAGTGGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp GTGATCGCCCCAGGTAAGTACTTCCCATTTCCTGAAGGTGTAGAGTaGGAGAATGAGCTGGCAGGTGACTTCCTGTCAAGGCTGTCATCT +
Preference number: 5 (lower is better)
Translates to: VIAPGKYFPFPEGVE*ENELAGDFLSRLSS
Trigger: AGATGACAGCCTTGACAGGAAGTCACCTGCCAGCTCATTCTCTCACTCTACACCTTCAGGAAATGGGAAGTACTTACCTGGGGCGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp AGTAGGATGCACGCACTCGACGGAAGAAGTCAAGGTCAGCAGTCTTaGCACTGCAATGATTCGGGATGTAGGCGAGATCCACATATACAG +
Preference number: 5 (lower is better)
Translates to: SRMHALDGRSQGQQS*HCNDSGCRRDPHIQ
Trigger: CTGTATATGTGGATCTCGCCTACATCCCGAATCATTGCAGTGGCAAGACTGCTGACCTTGACTTCTTCCGTCGAGTGCGTGCATCCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGAGGATGTTGAAACCATaGACAGCAAAGAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLRMLKP*TAKRAE
Trigger: CTCTGCCCTCTTTGCTGTCAATGGTTTCAACATCCT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGAGCTTCTCAGGCACGTaGAAAAAGACAACTCCAAGC +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLSFSGT*KKTTPS
Trigger: GCTTGGAGTTGTCTTTTTCAACGTGCCTGAGAAGCT...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAATTGCCTGCCCACTTTaGCATGAGGAACTGCATCTC +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAIACPL*HEELHL
Trigger: GAGATGCAGTTCCTCATGCAAAAGTGGGCAGGCAAT...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTCTTGGTAGTGGCTTaGAGGCTCTCCTTGCTATCA +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAVLVVA*RLSLLS
Trigger: TGATAGCAAGGAGAGCCTCAAAGCCACTACCAAGAC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ACTACCAGCTTCTGGGTTTCTCAGTCTGGCAGTAGTCTGGCAGGGCTGCTCACTTTCCCTACCTTGTCTTaGATCAGCTTTCGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TTSFWVSQSGSSLAGLLTFPTLS*ISFRFS
Trigger: AGAGAAGCGAAAGCTGATCAAAGACAAGGTAGGGAA...AGTGAGCAGCCCTGCCAGACTACTGCCAGACTGAGAAACCCAGAAGCTGGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTTGCTTTTTCCCTACCTaGTCTTTGATCAGCTTTCGC +
Preference number: 5 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLCFFPT*SLISFR
Trigger: GCGAAAGCTGATCAAAGACAAGGTAGGGAAAAAGCA...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAAAGCCTCCCGGCTCCTaGGAGTTACCTTCAAGGGTT +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQKPPGS*ELPSRV
Trigger: AACCCTTGAAGGTAACTCCAAGGAGCCGGGAGGCTT...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAGCAGGTCATATGTACTaGTATGAAATCTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSAGHMY*YEIWVE
Trigger: CTCCACCCAGATTTCATACAAGTACATATGACCTGC...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGGCAGGTCATATGTACTaGTATGAAATCTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLAGHMY*YEIWVE
Trigger: CTCCACCCAGATTTCATACAAGTACATATGACCTGC...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGGTGATTTGAAGCCCTaGTCTTCTTCCAGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAGDLKP*SSSSEE
Trigger: CTCCTCACTGGAAGAAGACAAGGGCTTCAAATCACC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTGCCTCCTGAAAGTCTaGGGGCTCAGACTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMCLLKV*GLRLFF
Trigger: GAAGAAAAGTCTGAGCCCCAAGACTTTCAGGAGGCA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCTGTGCTGGCAACAGTaGAATGGTACAGCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMLCWQQ*NGTACK
Trigger: CTTACAGGCTGTACCATTCAACTGTTGCCAGCACAG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTTCTGTTCAGGGGCTTaGTCTGTCTGTTCTAGGTCT +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCFCSGA*SVCSRS
Trigger: AGACCTAGAACAGACAGACAAAGCCCCTGAACAGAA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTTCTGTTCAGGGGCTTaGTCTGTCTGTTCTAGGTCT +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLFCSGA*SVCSRS
Trigger: AGACCTAGAACAGACAGACAAAGCCCCTGAACAGAA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCTCCCAGATCCTCTGTCCAAGAGCGGGTTTGGAGAGGCAGCCAGTGTTCCCATTTTCCTCTAGCATCTTaGGTTTCCTGGTTTTATCCT +
Preference number: 5 (lower is better)
Translates to: PPRSSVQERVWRGSQCSHFPLAS*VSWFYP
Trigger: AGGATAAAACCAGGAAACCAAAGATGCTAGAGGAAA...ATGGGAACACTGGCTGCCTCTCCAAACCCGCTCTTGGACAGAGGATCTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTGCAGGATGGCATAGTGGAATGTTGGGGGAGTCACACATTGCTGGGGTGTCATTCTCTTCCATGGCCTaGACCTTTTCTGGGGATTTT +
Preference number: 5 (lower is better)
Translates to: AAGWHSGMLGESHIAGVSFSSMA*TFSGDF
Trigger: AAAATCCCCAGAAAAGGTCAAGGCCATGGAAGAGAA...TGACACCCCAGCAATGTGTGACTCCCCCAACATTCCACTATGCCATCCTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGATTCCTGGAAATCCTaGAAGTCTGAGGCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQDSWKS*KSEAQG
Trigger: CCCCTGGGCCTCAGACTTCAAGGATTTCCAGGAATC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTCTATCCTATTCTAATTaGTCCCCTCCCCCATCCTCT +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILLSYSN*SPPPSS
Trigger: AGAGGATGGGGGAGGGGACAAATTAGAATAGGATAG...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GTCCCTGGAGTTGGGGATATAATCTCCCTCTACGAGGGAGGAGGTTGCTCTCTGATTCAATACCAGCATTaGACAGTGCTAGGAGAGGGT +
Preference number: 5 (lower is better)
Translates to: VPGVGDIISLYEGGGCSLIQYQH*TVLGEG
Trigger: ACCCTCTCCTAGCACTGTCAAATGCTGGTATTGAAT...CAGAGAGCAACCTCCTCCCTCGTAGAGGGAGATTATATCCCCAACTCCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GCTCCGTTACAGCAGCTGGGAACTATAGCAGGGAAGCGTGGGGAGGAGCAGAACTCACATAAATTACTATaGGAAATCCCTCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: APLQQLGTIAGKRGEEQNSHKLL*EIPPRM
Trigger: CATCCTGGGAGGGATTTCCAATAGTAATTTATGTGA...GTTCTGCTCCTCCCCACGCTTCCCTGCTATAGTTCCCAGCTGCTGTAACGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAACTGGGGTGTCAAATGTaGGGATGTCAGGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQLGCQM*GCQAVA
Trigger: AGCCACTGCCTGACATCCCAACATTTGACACCCCAG...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGGTTTATTGTTAGAGTaGGAGGTGGCTCCGTTACAG +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCGLLLE*EVAPLQ
Trigger: CTGTAACGGAGCCACCTCCAACTCTAACAATAAACC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTGGTTTATTGTTAGAGTaGGAGGTGGCTCCGTTACAG +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILGLLLE*EVAPLQ
Trigger: CTGTAACGGAGCCACCTCCAACTCTAACAATAAACC...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp CCTGTCTTGGCTTTACTATTGCCTGCCCACTTTTGCATGAGGAACTaGATCTCCTTGCTGTCCTTGACAGGGTTGAGGACATACATGTCC +
Preference number: 5 (lower is better)
Translates to: PVLALLLPAHFCMRN*ISLLSLTGLRTYMS
Trigger: GGACATGTATGTCCTCAACCCTGTCAAGGACAGCAAGGAGATGCAGTTCCTCATGCAAAAGTGGGCAGGCAATAGTAAAGCCAAGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp AACTTTATCTTCCCACTTTATGGCAATGTCCTCCAAGGCAGGGCCTaGCAAAGACTCAGGACTCTTGGAGAAGGAGCTATCAGGTGTCAG +
Preference number: 5 (lower is better)
Translates to: NFIFPLYGNVLQGRA*QRLRTLGEGAIRCQ
Trigger: CTGACACCTGATAGCTCCTTCTCCAAGAGTCCTGAGTCTTTGCCAGGCCCTGCCTTGGAGGACATTGCCATAAAGTGGGAAGATAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp CTGAGGTTCTGTCTTTCAACCCTGGAACTTTATCTTCCCACTTTATaGCAATGTCCTCCAAGGCAGGGCCTGGCAAAGACTCAGGACTCT +
Preference number: 5 (lower is better)
Translates to: LRFCLSTLELYLPTL*QCPPRQGLAKTQDS
Trigger: AGAGTCCTGAGTCTTTGCCAGGCCCTGCCTTGGAGGACATTGCCATAAAGTGGGAAGATAAAGTTCCAGGGTTGAAAGACAGAACCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCATCTATTGCTGAGCAATaGGGAAATCTCGGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQASIAEQ*GNLGVV
Trigger: CACAACCCCGAGATTTCCCAATTGCTCAGCAATAGA...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAATCCCAGGGTCTCTATaGCTGAGCAATTGGGAAATC +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAIPGSL*LSNWEI
Trigger: GATTTCCCAATTGCTCAGCAATAGAGACCCTGGGAT...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCAGTGGCTCAATGGTATaGCTGACCACACGATATAGA +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCSGSMV*LTTRYR
Trigger: TCTATATCGTGTGGTCAGCAATACCATTGAGCCACT...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAAGCACGATGCCTGTCTaGGCTTTACTATTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQSTMPV*ALLLPA
Trigger: GGCAGGCAATAGTAAAGCCAAGACAGGCATCGTGCT...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTTCCCTACCTTGTCTTaGATCAGCTTTCGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLFPTLS*ISFRFS
Trigger: AGAGAAGCGAAAGCTGATCAAAGACAAGGTAGGGAA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTTCTTGAGCTCAGGTTaGGTATCTTTCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCFLSSG*VSFLFS
Trigger: GGAGAAGAGGAAAGATACCAAACCTGAGCTCAAGAA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGGGCTTGGAAATCTTCTaGAGCTCAGGTTTGGTATCT +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLGLEIF*SSGLVS
Trigger: AGATACCAAACCTGAGCTCAAGAAGATTTCCAAGCC...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCAAAAACCCTCAGCTTTaGTCGCGTCCTCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: RRGFSGIRCYPILICPLPKNPQL*SRPLPP
Trigger: AGGAGGAAGAGGACGCGACAAAAGCTGAGGGTTTTT...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTCACTGGAGTTCCATATaGACTGCAAAGTTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLHWSSI*TAKFLR
Trigger: TCTGAGAAACTTTGCAGTCAATATGGAACTCCAGTG...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCTCTGGCCAACGGTCTTaGTGTAGGTACTGTTCTGTC +
Preference number: 5 (lower is better)
Translates to: RRGFSGIRCYPILICPLPSGQRS*CRYCSV
Trigger: GACAGAACAGTACCTACACAAAGACCGTTGGCCAGA...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGAAAGACTCAGGACTCTaGGAGAAGGAGCTATCAGGT +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMKDSGL*EKELSG
Trigger: ACCTGATAGCTCCTTCTCCAAGAGTCCTGAGTCTTT...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCAGAGCCTGAATGTTTaGTTCCAGGGCTTCATCCTT +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMQSLNV*FQGFIL
Trigger: AAGGATGAAGCCCTGGAACAAAACATTCAGGCTCTG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTTCTCTTCCATGGCCTaGACCTTTTCTGGGGATTTT +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILFSSMA*TFSGDF
Trigger: AAAATCCCCAGAAAAGGTCAAGGCCATGGAAGAGAA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGTTTCAGTTGGGCCATaGGCTGCACAATCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQVSVGP*AAQSSE
Trigger: CTCTGAGGATTGTGCAGCCAATGGCCCAACTGAAAC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCAGGACATTCAGTTGTaGCTGCTGCTCATGAGTTTG +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMQDIQL*LLLMSL
Trigger: CAAACTCATGAGCAGCAGCAACAACTGAATGTCCTG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGCTATCCTATTCTAATTaGTCCCCTCCCCCATCCTCT +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMLSYSN*SPPPSS
Trigger: AGAGGATGGGGGAGGGGACAAATTAGAATAGGATAG...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp GGACCTGGGCAAAGTTTTCATATGAGTAGGTGCCACTCTGTAGGATaGGGTCTCCCCCAGGCTCTAAACTTTGCCCACTCAAGATTAGTA +
Preference number: 5 (lower is better)
Translates to: GPGQSFHMSRCHSVG*GLPQALNFAHSRLV
Trigger: TACTAATCTTGAGTGGGCAAAGTTTAGAGCCTGGGGGAGACCTCATCCTACAGAGTGGCACCTACTCATATGAAAACTTTGCCCAGGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp GTGCCGGGTAATGAAGAGTCTCAACTGTTGGTTCAAGTCAAAGGATaGCAGGTCAATGTTCCAGGAGAGAATCCCTTGTTCAAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: VPGNEESQLLVQVKG*QVNVPGENPLFKVG
Trigger: GCCCACCTTGAACAAGGGATTCTCTCCTGGAACATTGACCTGTCATCCTTTGACTTGAACCAACAGTTGAGACTCTTCATTACCCGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAATCTCCTTGCTGTCCTaGACAGGGTTGAGGACATAC +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQISLLS*TGLRTY
Trigger: GTATGTCCTCAACCCTGTCAAGGACAGCAAGGAGAT...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAAGTCTTGGTAGTGGCTTaGAGGCTCTCCTTGCTATCA +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQVLVVA*RLSLLS
Trigger: TGATAGCAAGGAGAGCCTCAAAGCCACTACCAAGAC...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTGCTTTTTCCCTACCTaGTCTTTGATCAGCTTTCGC +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMCFFPT*SLISFR
Trigger: GCGAAAGCTGATCAAAGACAAGGTAGGGAAAAAGCA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp TTAAACACCAAGCCACAGCAGATGACCACATGCAGAGAAGCCAAGCAGGGGATGTTCTTGAGCTCAGGTTaGGTATCTTTCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LNTKPQQMTTCREAKQGMFLSSG*VSFLFS
Trigger: GGAGAAGAGGAAAGATACCAAACCTGAGCTCAAGAA...CATCCCCTGCTTGGCTTCTCTGCATGTGGTCATCTGCTGTGGCTTGGTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATCTGGCCAACGGTCTTaGTGTAGGTACTGTTCTGTC +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQSGQRS*CRYCSV
Trigger: GACAGAACAGTACCTACACAAAGACCGTTGGCCAGA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTTCTGTTCCAGGGCCTaGTCTTTTTCTTCTAAGTCT +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLFCSRA*SFSSKS
Trigger: AGACTTAGAAGAAAAAGACAAGGCCCTGGAACAGAA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGTGGCTTTTTCCTCTAGCATCTTaGGTTTCCTGGTTTTATCCT +
Preference number: 5 (lower is better)
Translates to: GGVTHCWGVKCWDVRQWLFPLAS*VSWFYP
Trigger: AGGATAAAACCAGGAAACCAAAGATGCTAGAGGAAA...AAGCCACTGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAATGGCCTCTGGTACCTTaGAGCTGTGTGAGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQWPLVP*SCVSFC
Trigger: ACAAAAGCTCACACAGCTCAAAGGTACCAGAGGCCA...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AAGAACACAAGGTGGGCTCATTTTGGTTTCCCAGTCGTTTGGCAGAGAAGGCAACTGCTGCTCATGAGTTaGTTGGTACCACTCACGAGT +
Preference number: 5 (lower is better)
Translates to: KNTRWAHFGFPVVWQRRQLLLMS*LVPLTS
Trigger: ACTCGTGAGTGGTACCAACAAACTCATGAGCAGCAG...TTGCCTTCTCTGCCAAACGACTGGGAAACCAAAATGAGCCCACCTTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp ATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTGTCTGGACACAGTCACATAAATTACTATaGGAAATCCCTCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: ILALGLGLSLPFCAVWTQSHKLL*EIPPRM
Trigger: CATCCTGGGAGGGATTTCCAATAGTAATTTATGTGA...CTGTGTCCAGACAGCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp GGGCTCTCCTGCCTCCATAATCTCAAAGACTATTGCTTTATCCTGTaGTGGCAACAGTTGAATGGTACAGCCTGTAAGCCCCTCATCAAT +
Preference number: 5 (lower is better)
Translates to: GLSCLHNLKDYCFIL*WQQLNGTACKPLIN
Trigger: ATTGATGAGGGGCTTACAGGCTGTACCATTCAACTGTTGCCAGCACAGGATAAAGCAATAGTCTTTGAGATTATGGAGGCAGGAGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp TCACAGCCTCATTCTTTACATGCAGAGCCTCATCTTTCTGATAGATaGCTGTATCCTTCGGCTCTACCACCTCCTTGTGCTCCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: SQPHSLHAEPHLSDR*LYPSALPPPCAPEF
Trigger: AAACTCTGGAGCACAAGGAGGTGGTAGAGCCGAAGGATACAGCCATCTATCAGAAAGATGAGGCTCTGCATGTAAAGAATGAGGCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCAGTGGCTCAATGGTATaGCTGACCACACGATATAGA +
Preference number: 5 (lower is better)
Translates to: RRGFSGIRCYPILICPLPSGSMV*LTTRYR
Trigger: TCTATATCGTGTGGTCAGCAATACCATTGAGCCACT...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCCTCCAAGATCTTGTTTaGGGGAGCATTTCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: RRGFSGIRCYPILICPLPLQDLV*GSISWK
Trigger: TTTCCAGGAAATGCTCCCCAAAACAAGATCTTGGAG...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp AGGAGAGGGTTCTCAGGCATCAGATGCTATCCTATTCTAATTTGTCCCCTCCCCGGCTTGGAAATCTTCTaGAGCTCAGGTTTGGTATCT +
Preference number: 5 (lower is better)
Translates to: RRGFSGIRCYPILICPLPGLEIF*SSGLVS
Trigger: AGATACCAAACCTGAGCTCAAGAAGATTTCCAAGCC...GGGGAGGGGACAAATTAGAATAGGATAGCATCTGATGCCTGAGAACCCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCGCAAAGGAAGAAAGTTaGTCACACTCAGTGATTGAA +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCAKEES*SHSVIE
Trigger: TTCAATCACTGAGTGTGACAAACTTTCTTCCTTTGC...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTTGTGCTCCAGAGTTTaGTCTTTCTGCTGTAAAACT +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILLCSRV*SFCCKT
Trigger: AGTTTTACAGCAGAAAGACAAAACTCTGGAGCACAA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTGCTTGTGCTCCAGAGTTTaGTCTTTCTGCTGTAAAACT +
Preference number: 5 (lower is better)
Translates to: GVWKNSGIGAWALLAVLCLCSRV*SFCCKT
Trigger: AGTTTTACAGCAGAAAGACAAAACTCTGGAGCACAA...GCACAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp TCCTTCGGCTCTACCACCTCCTTGTGCTCCAGAGTTTTGTCTTTCTaGTGTAAAACTTCATCCTTTGGCTCAGGTTCCTTCTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: SFGSTTSLCSRVLSF*CKTSSFGSGSFFCS
Trigger: AGAACAGAAGAAGGAACCTGAGCCAAAGGATGAAGTTTTACAGCAGAAAGACAAAACTCTGGAGCACAAGGAGGTGGTAGAGCCGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CCCAAAGGACTCAGCAGTAGCCATTCTCTAAAGGAGCTGGGGGAGTGGATCCTTTTCCTGCATATGTTTTaGGTAAAAACCCTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: PKGLSSSHSLKELGEWILFLHMF*VKTLSF
Trigger: AAAGCTGAGGGTTTTTACCAAAAACATATGCAGGAA...AAGGATCCACTCCCCCAGCTCCTTTAGAGAATGGCTACTGCTGAGTCCTTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp CAGGGAGTTTGGAAGAATTCTGGCATTGGGGCTTGGGCTCTCCTTGCCGTTTTGTTCCTGCATATGTTTTaGGTAAAAACCCTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: QGVWKNSGIGAWALLAVLFLHMF*VKTLSF
Trigger: AAAGCTGAGGGTTTTTACCAAAAACATATGCAGGAA...CAAAACGGCAAGGAGAGCCCAAGCCCCAATGCCAGAATTCTTCCAAACTCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS-3UTR CAA 90 bp GAATGTTGGGGGAGTCACACATTGCTGGGGTGTCAAATGTTGGGATGTCAGGCAGCAAAGGAAGAAAGTTaGTCACACTCAGTGATTGAA +
Preference number: 5 (lower is better)
Translates to: ECWGSHTLLGCQMLGCQAAKEES*SHSVIE
Trigger: TTCAATCACTGAGTGTGACAAACTTTCTTCCTTTGC...TGCCTGACATCCCAACATTTGACACCCCAGCAATGTGTGACTCCCCCAACATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 90 bp CTCTCCTGCCTCCATAATCTCAAAGACTATTGCTTTATCCTGTGCTaGCAACAGTTGAATGGTACAGCCTGTAAGCCCCTCATCAATGTT +
Preference number: 5 (lower is better)
Translates to: LSCLHNLKDYCFILC*QQLNGTACKPLINV
Trigger: AACATTGATGAGGGGCTTACAGGCTGTACCATTCAACTGTTGCCAGCACAGGATAAAGCAATAGTCTTTGAGATTATGGAGGCAGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 90 bp TCCATAATCTCAAAGACTATTGCTTTATCCTGTGCTGGCAACAGTTaGATGGTACAGCCTGTAAGCCCCTCATCAATGTTGACAGGTGCT +
Preference number: 5 (lower is better)
Translates to: SIISKTIALSCAGNS*MVQPVSPSSMLTGA
Trigger: AGCACCTGTCAACATTGATGAGGGGCTTACAGGCTGTACCATTCAACTGTTGCCAGCACAGGATAAAGCAATAGTCTTTGAGATTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 90 bp TCTTTTTGCTCTAAGTCTCTGCCCTTTTGTTCTAAAGCCTTATCCTaGTGTTTCACAGCCTCATTCTTTACATGCAGAGCCTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: SFCSKSLPFCSKALS*CFTASFFTCRASSF
Trigger: GAAAGATGAGGCTCTGCATGTAAAGAATGAGGCTGTGAAACAGCAGGATAAGGCTTTAGAACAAAAGGGCAGAGACTTAGAGCAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp CGGGACTTCGGAGCCCCAGCCCCGGAGTTGTCTCCATaGCAACGCCGTGAGGCCGCGCAGGCTCGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: RDFGAPAPELSP*QRREAAQARPR
Trigger: CCGAGGCCGAGCCTGCGCGGCCTCACGGCGTTGCCATGGAGACAACTCCGGGGCTGGGGCTCCGAAGTCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS CAA 72 bp GCGGTGCGCCGGGACTTCGGAGCCCCAGCCCCGGAGTaGTCTCCATGGCAACGCCGTGAGGCCGCGCAGGCT +
Preference number: 6 (lower is better)
Translates to: AVRRDFGAPAPE*SPWQRREAAQA
Trigger: AGCCTGCGCGGCCTCACGGCGTTGCCATGGAGACAACTCCGGGGCTGGGGCTCCGAAGTCCCGGCGCACCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS CAA 90 bp TCTGAGCCAGCGGTGCGCCGGGACTTCGGAGCCCCAGCCCCGGAGTaGTCTCCATGGCAACGCCGTGAGGCCGCGCAGGCTCGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: SEPAVRRDFGAPAPE*SPWQRREAAQARPR
Trigger: CCGAGGCCGAGCCTGCGCGGCCTCACGGCGTTGCCATGGAGACAACTCCGGGGCTGGGGCTCCGAAGTCCCGGCGCACCGCTGGCTCAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS TCA 72 bp AGCCCCAGCCCCGGAGTTGTCTCCATGGCAACGCCGTaGGGCCGCGCAGGCTCGGCCTCGGTCTCCATGGAA +
Preference number: 6 (lower is better)
Translates to: SPSPGVVSMATP*GRAGSASVSME
Trigger: TTCCATGGAGACCGAGGCCGAGCCTGCGCGGCCTCACGGCGTTGCCATGGAGACAACTCCGGGGCTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS CCA 72 bp TCCCCACGATGGGGCCGAGGCTCAGTGGCACATCCCTaGGGCCCAGCTTCGACCTCAGGAGAGGCACTGCTG +
Preference number: 6 (lower is better)
Translates to: SPRWGRGSVAHP*GPASTSGEALL
Trigger: CAGCAGTGCCTCTCCTGAGGTCGAAGCTGGGCCCCAGGGATGTGCCACTGAGCCTCGGCCCCATCGTGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp TGCAGGTGGGGTGAGGCTGGGCTCCATACTTGGCCCTaGCTCTGGCCTTGGGGGTACAGTGGGTCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: CRWGEAGLHTWP*LWPWGYSGSCQ
Trigger: CTGGCAGGACCCACTGTACCCCCAAGGCCAGAGCCAGGGCCAAGTATGGAGCCCAGCCTCACCCCACCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp TGGGGTGACCTGGCTTGTGGTGCTGCGTGGTCGAGGTaGGGCCCGGGATGCTCGATCTGCAGGCCCTTTACC +
Preference number: 6 (lower is better)
Translates to: WGDLACGAAWSR*GPGCSICRPFT
Trigger: GGTAAAGGGCCTGCAGATCGAGCATCCCGGGCCCCACCTCGACCACGCAGCACCACAAGCCAGGTCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp TTCCTCTGCTGGGGTGACCTGGCTTGTGGTGCTGCGTaGTCGAGGTGGGGCCCGGGATGCTCGATCTGCAGG +
Preference number: 6 (lower is better)
Translates to: FLCWGDLACGAA*SRWGPGCSICR
Trigger: CCTGCAGATCGAGCATCCCGGGCCCCACCTCGACCACGCAGCACCACAAGCCAGGTCACCCCAGCAGAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp CCTCAGAGGGAACCTGGAAGGGGCTTGGCTTCTCCGTaGCTGCCTCTGAGCACTCCAGGTGGCACGGCAGGA +
Preference number: 6 (lower is better)
Translates to: PQREPGRGLASP*LPLSTPGGTAG
Trigger: TCCTGCCGTGCCACCTGGAGTGCTCAGAGGCAGCCACGGAGAAGCCAAGCCCCTTCCAGGTTCCCTCTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp CCAGGTGGCACGGCAGGATGCCATCACCCATGTCTCCAGGCAGGCTaGGAGCTGGAGCTAGGGCCAAGTCCAGTGAAGCTGGGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: PGGTAGCHHPCLQAG*ELELGPSPVKLGVL
Trigger: CAGCACCCCCAGCTTCACTGGACTTGGCCCTAGCTCCAGCTCCAAGCCTGCCTGGAGACATGGGTGATGGCATCCTGCCGTGCCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp CTTGGCTTCTCCGTGGCTGCCTCTGAGCACTCCAGGTaGCACGGCAGGATGCCATCACCCATGTCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: LGFSVAASEHSR*HGRMPSPMSPG
Trigger: GCCTGGAGACATGGGTGATGGCATCCTGCCGTGCCACCTGGAGTGCTCAGAGGCAGCCACGGAGAAGCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp CGCTCCACCTCTAGCCCCTTCTGTGGTGAGGATTCCTGGAAATCCTaGAAGTCTGAGGCCCAGGGGCTCCGGGTTGCGTGTTCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: RSTSSPFCGEDSWKS*KSEAQGLRVACSRR
Trigger: CCTGCGGGAACACGCAACCCGGAGCCCCTGGGCCTCAGACTTCAAGGATTTCCAGGAATCCTCACCACAGAAGGGGCTAGAGGTGGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp GCTCCTTCTCTGCAGATGTGTTTCGGCCGGCAGCTGCCTCCTTGGTaGAGAGGCATGGGGGCCAATCCCCAGCTGCTCCAAGTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: APSLQMCFGRQLPPW*RGMGANPQLLQVEA
Trigger: AGCCTCCACTTGGAGCAGCTGGGGATTGGCCCCCATGCCTCTCAACCAAGGAGGCAGCTGCCGGCCGAAACACATCTGCAGAGAAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp TTGGGCCATTGGCTGCACAATCCTCAGAGGGAACCTGGAAGGGGCTaGGCTTCTCCGTGGCTGCCTCTGAGCACTCCAGGTGGCACGGCA +
Preference number: 6 (lower is better)
Translates to: LGHWLHNPQREPGRG*ASPWLPLSTPGGTA
Trigger: TGCCGTGCCACCTGGAGTGCTCAGAGGCAGCCACGGAGAAGCCAAGCCCCTTCCAGGTTCCCTCTGAGGATTGTGCAGCCAATGGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp TGCAGATGTGTTTCGGCCGGCAGCTGCCTCCTTGGTTaGGAGGCATGGGGGCCAATCCCCAGCTGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: CRCVSAGSCLLG*EAWGPIPSCSK
Trigger: CTTGGAGCAGCTGGGGATTGGCCCCCATGCCTCTCAACCAAGGAGGCAGCTGCCGGCCGAAACACATCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp TCTCCCGTAGCCTCTCTACTCTCCCAGACTCTGAGCTaGGCCCCTCGGGGTCAGCCATGCACACATCAGGGC +
Preference number: 6 (lower is better)
Translates to: SPVASLLSQTLS*APRGQPCTHQG
Trigger: GCCCTGATGTGTGCATGGCTGACCCCGAGGGGCTCAGCTCAGAGTCTGGGAGAGTAGAGAGGCTACGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp CCGATATCGCCGATCACAATTAGCAAAGAGTGCTTCTaGAGGTCCCAGCGTGCAGCCGCCACCGCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: PISPITISKECF*RSQRAAATAAP
Trigger: CGGAGCCGCGGTGGCGGCTGCACGCTGGGACCTGCAGAAGCACTCTTTGCTAATTGTGATCGGCGATATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS CAA 72 bp CTGCAGATGTGTTTCGGCCGGCAGCTGCCTCCTTGGTaGAGAGGCATGGGGGCCAATCCCCAGCTGCTCCAA +
Preference number: 6 (lower is better)
Translates to: LQMCFGRQLPPW*RGMGANPQLLQ
Trigger: TTGGAGCAGCTGGGGATTGGCCCCCATGCCTCTCAACCAAGGAGGCAGCTGCCGGCCGAAACACATCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp AGGGAAGTCCAGACTGGGTCGGGCAGGCCCCAGGTGTaGGTCCAAGGGAGGGCTAACATGTGCCTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: REVQTGSGRPQV*VQGRANMCLSF
Trigger: GAAACTGAGGCACATGTTAGCCCTCCCTTGGACTCACACCTGGGGCCTGCCCGACCCAGTCTGGACTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp GTGGGTCATGGCCAGGCCTGGGGTGGTGAGTACCACTaGCACCCCCAGCTTTGTCCACAGGTAGGAAGTCTC +
Preference number: 6 (lower is better)
Translates to: VGHGQAWGGEYH*HPQLCPQVGSL
Trigger: GAGACTTCCTACCTGTGGACAAAGCTGGGGGTGTCAGTGGTACTCACCACCCCAGGCCTGGCCATGACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp CTCTGGCCTTGGGGGTACAGTGGGTCCTGCCAGGGCTaGATAGCTGAAGGTTGGAGTGTCAGACTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: LWPWGYSGSCQG*IAEGWSVRLEA
Trigger: AGCCTCCAGTCTGACACTCCAACCTTCAGCTATGCAGCCCTGGCAGGACCCACTGTACCCCCAAGGCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp AGACATACTCGGAGAACTCAGCCACGCCGTCCATGGTaGGCAGAGTGGGCTCAGGGTTTAGCCGGAGGTGCA +
Preference number: 6 (lower is better)
Translates to: RHTRRTQPRRPW*AEWAQGLAGGA
Trigger: TGCACCTCCGGCTAAACCCTGAGCCCACTCTGCCCACCATGGACGGCGTGGCTGAGTTCTCCGAGTATGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp CAGAGACATACTCGGAGAACTCAGCCACGCCGTCCATaGTGGGCAGAGTGGGCTCAGGGTTTAGCCGGAGGT +
Preference number: 6 (lower is better)
Translates to: QRHTRRTQPRRP*WAEWAQGLAGG
Trigger: ACCTCCGGCTAAACCCTGAGCCCACTCTGCCCACCATGGACGGCGTGGCTGAGTTCTCCGAGTATGTCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp TTGCCAGAGGTAGCAGGAACAGCACTATCGGCAGGTTaGCTGGCTTCGAATGGGCCAGCACCTTCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: LPEVAGTALSAG*LASNGPAPSGP
Trigger: CGGGCCTGAAGGTGCTGGCCCATTCGAAGCCAGCCAACCTGCCGATAGTGCTGTTCCTGCTACCTCTGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp GTGACGCTGTGGCTGCATGGGGCTCTGGAACAGACATaGGAGCTGTGTGGTGAGAGGTATCCTCGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: VTLWLHGALEQT*ELCGERYPRPA
Trigger: TGCAGGCCGAGGATACCTCTCACCACACAGCTCCCATGTCTGTTCCAGAGCCCCATGCAGCCACAGCGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp GCTCTCTCTGCTCCGGCTCAGTCTGCTCAGGCTCCGTaGTGGCATGGCTTTTGCTGGCCTCTGGTACCTTTG +
Preference number: 6 (lower is better)
Translates to: ALSAPAQSAQAP*WHGFCWPLVPL
Trigger: CAAAGGTACCAGAGGCCAGCAAAAGCCATGCCACCACGGAGCCTGAGCAGACTGAGCCGGAGCAGAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TGCTGCAGAGTGAGGCAGGCCTCCTCAATGCTACGCTaGGCTTTCCGGGAGGCATCAGGAAGCCGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: CCRVRQASSMLR*AFREASGSRSF
Trigger: GAAGCTGCGGCTTCCTGATGCCTCCCGGAAAGCCAAGCGTAGCATTGAGGAGGCCTGCCTCACTCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp CGGTTTAAGTGCTGCAGAGTGAGGCAGGCCTCCTCAATGCTACGCTaGGCTTTCCGGGAGGCATCAGGAAGCCGCAGCTTCTCAGGCACG +
Preference number: 6 (lower is better)
Translates to: RFKCCRVRQASSMLR*AFREASGSRSFSGT
Trigger: CGTGCCTGAGAAGCTGCGGCTTCCTGATGCCTCCCGGAAAGCCAAGCGTAGCATTGAGGAGGCCTGCCTCACTCTGCAGCACTTAAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp TCCATAGACTTTGCCAGAGGTAGCAGGAACAGCACTATCGGCAGGTaGGCTGGCTTCGAATGGGCCAGCACCTTCAGGCCCGGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: SIDFARGSRNSTIGR*AGFEWASTFRPGQV
Trigger: GACCTGCCCGGGCCTGAAGGTGCTGGCCCATTCGAAGCCAGCCAACCTGCCGATAGTGCTGTTCCTGCTACCTCTGGCAAAGTCTATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp CCCTCTTCAGGCCCTGGCTTGACTGTCTCCTCAGCAGCATCTTCTTaGCCCACACCTGGTGTGCGCTTAGTGTCTCCCCAGGAGTCTGCC +
Preference number: 6 (lower is better)
Translates to: PSSGPGLTVSSAASS*PTPGVRLVSPQESA
Trigger: GGCAGACTCCTGGGGAGACACTAAGCGCACACCAGGTGTGGGCAAAGAAGATGCTGCTGAGGAGACAGTCAAGCCAGGGCCTGAAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp GAAAGCTCCTTCTCTGCAGATGTGTTTCGGCCGGCAGCTGCCTCCTaGGTTGAGAGGCATGGGGGCCAATCCCCAGCTGCTCCAAGTGGA +
Preference number: 6 (lower is better)
Translates to: ESSFSADVFRPAAAS*VERHGGQSPAAPSG
Trigger: TCCACTTGGAGCAGCTGGGGATTGGCCCCCATGCCTCTCAACCAAGGAGGCAGCTGCCGGCCGAAACACATCTGCAGAGAAGGAGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp CAGCCTGGATGCCCAGGCGGTTTAAGTGCTGCAGAGTaGGGCAGGCCTCCTCAATGCTACGCTTGGCTTTCC +
Preference number: 6 (lower is better)
Translates to: QPGCPGGLSAAE*GRPPQCYAWLS
Trigger: GGAAAGCCAAGCGTAGCATTGAGGAGGCCTGCCTCACTCTGCAGCACTTAAACCGCCTGGGCATCCAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp GCACCTTCAGGCCCGGGCAGGTCATATGTACTTGTATaGAATCTGGGTGGAGCTGGGCGCTCCTCCGGCTCA +
Preference number: 6 (lower is better)
Translates to: APSGPGRSYVLV*NLGGAGRSSGS
Trigger: TGAGCCGGAGGAGCGCCCAGCTCCACCCAGATTTCATACAAGTACATATGACCTGCCCGGGCCTGAAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp TTGGGGGTACAGTGGGTCCTGCCAGGGCTGCATAGCTaGAGGTTGGAGTGTCAGACTGGAGGCTCTTGGGTG +
Preference number: 6 (lower is better)
Translates to: LGVQWVLPGLHS*RLECQTGGSWV
Trigger: CACCCAAGAGCCTCCAGTCTGACACTCCAACCTTCAGCTATGCAGCCCTGGCAGGACCCACTGTACCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp AGAGGCTCAGCCTGGATGCCCAGGCGGTTTAAGTGCTaGAGAGTGAGGCAGGCCTCCTCAATGCTACGCTTG +
Preference number: 6 (lower is better)
Translates to: RGSAWMPRRFKC*RVRQASSMLRL
Trigger: CAAGCGTAGCATTGAGGAGGCCTGCCTCACTCTGCAGCACTTAAACCGCCTGGGCATCCAGGCTGAGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp TCTCCAGCCGGCTCCTCTCTGGTAGGAGATGTTTCTTaGCACTCCTGGACCACATCCTGCCCCCTCCAGTAC +
Preference number: 6 (lower is better)
Translates to: SPAGSSLVGDVS*HSWTTSCPLQY
Trigger: GTACTGGAGGGGGCAGGATGTGGTCCAGGAGTGGCAAGAAACATCTCCTACCAGAGAGGAGCCGGCTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp GCCACATCCTCTCTGCCCCTCCAATACCTATTGTCCTaGTCAGGAGATGTGTCCTCCCATGCCGGGGCAAGC +
Preference number: 6 (lower is better)
Translates to: ATSSLPLQYLLS*SGDVSSHAGAS
Trigger: GCTTGCCCCGGCATGGGAGGACACATCTCCTGAGCAGGACAATAGGTATTGGAGGGGCAGAGAGGATGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp CCTGCACTGCAGCCACCACACTGTCATACTCGGCTGTaGCCCAAGAGAAGGGTGCAGGAGTATGGGATTCCG +
Preference number: 6 (lower is better)
Translates to: PALQPPHCHTRL*PKRRVQEYGIP
Trigger: CGGAATCCCATACTCCTGCACCCTTCTCTTGGGGCACAGCCGAGTATGACAGTGTGGTGGCTGCAGTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp TCTTGTCCCAGCCCTGGAACAGAGGGTGGTGTTCCCTaGATAGCTGTACTTGGGGGTCCCTCCTCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: SCPSPGTEGGVP*IAVLGGPSSAV
Trigger: CACTGCAGAGGAGGGACCCCCAAGTACAGCTATCCAGGGAACACCACCCTCTGTTCCAGGGCTGGGACAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp AGGAACAGCACTATCGGCAGGTTGGCTGGCTTCGAATaGGCCAGCACCTTCAGGCCCGGGCAGGTCATATGT +
Preference number: 6 (lower is better)
Translates to: RNSTIGRLAGFE*ASTFRPGQVIC
Trigger: ACATATGACCTGCCCGGGCCTGAAGGTGCTGGCCCATTCGAAGCCAGCCAACCTGCCGATAGTGCTGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp TGCTCCGGCTCAGTCTGCTCAGGCTCCGTGGTGGCATaGCTTTTGCTGGCCTCTGGTACCTTTGAGCTGTGT +
Preference number: 6 (lower is better)
Translates to: CSGSVCSGSVVA*LLLASGTFELC
Trigger: ACACAGCTCAAAGGTACCAGAGGCCAGCAAAAGCCATGCCACCACGGAGCCTGAGCAGACTGAGCCGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp TTTGGACATGGGGCTGTGTCCATCCTTTTCCTCTGCTaGGGTGACCTGGCTTGTGGTGCTGCGTGGTCGAGG +
Preference number: 6 (lower is better)
Translates to: FGHGAVSILFLC*GDLACGAAWSR
Trigger: CCTCGACCACGCAGCACCACAAGCCAGGTCACCCCAGCAGAGGAAAAGGATGGACACAGCCCCATGTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp GCTCCCTCTTCTACCACCTCCTCCCGTTTGGCCAACTaGCTCACGGCCGTCTTGGTAGTGGCTTTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: APSSTTSSRLAN*LTAVLVVALRL
Trigger: GAGCCTCAAAGCCACTACCAAGACGGCCGTGAGCAAGTTGGCCAAACGGGAGGAGGTGGTAGAAGAGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TTTGCCAGAGGTAGCAGGAACAGCACTATCGGCAGGTaGGCTGGCTTCGAATGGGCCAGCACCTTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: FARGSRNSTIGR*AGFEWASTFRP
Trigger: GGGCCTGAAGGTGCTGGCCCATTCGAAGCCAGCCAACCTGCCGATAGTGCTGTTCCTGCTACCTCTGGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp GGCCCTGGCTTGACTGTCTCCTCAGCAGCATCTTCTTaGCCCACACCTGGTGTGCGCTTAGTGTCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: GPGLTVSSAASS*PTPGVRLVSPQ
Trigger: CTGGGGAGACACTAAGCGCACACCAGGTGTGGGCAAAGAAGATGCTGCTGAGGAGACAGTCAAGCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp TCTGAACGTGCCTCCTTGGCTCCCTCTTCTACCACCTCCTCCCGTTaGGCCAACTTGCTCACGGCCGTCTTGGTAGTGGCTTTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: SERASLAPSSTTSSR*ANLLTAVLVVALRL
Trigger: GAGCCTCAAAGCCACTACCAAGACGGCCGTGAGCAAGTTGGCCAAACGGGAGGAGGTGGTAGAAGAGGGAGCCAAGGAGGCACGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp CGGCCCACACCCATTTTGTGGAAGAGGGTCAGTGGCTCAATGGTATaGCTGACCACACGATATAGAGGCTCAGCCTGGATGCCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: RPTPILWKRVSGSMV*LTTRYRGSAWMPRR
Trigger: CCGCCTGGGCATCCAGGCTGAGCCTCTATATCGTGTGGTCAGCAATACCATTGAGCCACTGACCCTCTTCCACAAAATGGGTGTGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp CTCTGCTCCGGCTCAGTCTGCTCAGGCTCCGTGGTGGCATGGCTTTaGCTGGCCTCTGGTACCTTTGAGCTGTGTGAGCTTTTGTCAGGA +
Preference number: 6 (lower is better)
Translates to: LCSGSVCSGSVVAWL*LASGTFELCELLSG
Trigger: TCCTGACAAAAGCTCACACAGCTCAAAGGTACCAGAGGCCAGCAAAAGCCATGCCACCACGGAGCCTGAGCAGACTGAGCCGGAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp CTAGCCCCTTCTGTGGTGAGGATTCCTGGAAATCCTTaGAGTCTGAGGCCCAGGGGCTCCGGGTTGCGTGTT +
Preference number: 6 (lower is better)
Translates to: LAPSVVRIPGNP*SLRPRGSGLRV
Trigger: AACACGCAACCCGGAGCCCCTGGGCCTCAGACTTCAAGGATTTCCAGGAATCCTCACCACAGAAGGGGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp TATAGAGGCTCAGCCTGGATGCCCAGGCGGTTTAAGTaGTGCAGAGTGAGGCAGGCCTCCTCAATGCTACGC +
Preference number: 6 (lower is better)
Translates to: YRGSAWMPRRFK*CRVRQASSMLR
Trigger: GCGTAGCATTGAGGAGGCCTGCCTCACTCTGCAGCACTTAAACCGCCTGGGCATCCAGGCTGAGCCTCTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp GTGAGGTCCTCTGGTGAGGATAGGACCAGCTCCCTGTaGCCACTGATGGTTGGGAGTGGTACAGTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: VRSSGEDRTSSL*PLMVGSGTVPF
Trigger: GAAGGGAACTGTACCACTCCCAACCATCAGTGGGCACAGGGAGCTGGTCCTATCCTCACCAGAGGACCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp GGGCTCCGGGTTGCGTGTTCCCGCAGGGGTACTTCTTaGTCATCATCTGGGCCCTCATCTAGGAAAGTGCTT +
Preference number: 6 (lower is better)
Translates to: GLRVACSRRGTS*SSSGPSSRKVL
Trigger: AAGCACTTTCCTAGATGAGGGCCCAGATGATGAGCAAGAAGTACCCCTGCGGGAACACGCAACCCGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp TCTGTACCGATATCGCCGATCACAATTAGCAAAGAGTaGTTCTGCAGGTCCCAGCGTGCAGCCGCCACCGCG +
Preference number: 6 (lower is better)
Translates to: SVPISPITISKE*FCRSQRAAATA
Trigger: CGCGGTGGCGGCTGCACGCTGGGACCTGCAGAAGCACTCTTTGCTAATTGTGATCGGCGATATCGGTACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS CCA 72 bp GTGGGCTCAGGGTTTAGCCGGAGGTGCAGGGTCTCTTaGGAACTGGATAATCCCAGGTGGCTCCAATCACCT +
Preference number: 6 (lower is better)
Translates to: VGSGFSRRCRVS*ELDNPRWLQSP
Trigger: AGGTGATTGGAGCCACCTGGGATTATCCAGTTCCCAAGAGACCCTGCACCTCCGGCTAAACCCTGAGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp CAGGCCCGGGCAGGTCATATGTACTTGTATGAAATCTaGGTGGAGCTGGGCGCTCCTCCGGCTCATCATGGA +
Preference number: 6 (lower is better)
Translates to: QARAGHMYLYEI*VELGAPPAHHG
Trigger: TCCATGATGAGCCGGAGGAGCGCCCAGCTCCACCCAGATTTCATACAAGTACATATGACCTGCCCGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp AGTATCGAGTTGTCCCATCTGTGGGAGGTGACGCTGTaGCTGCATGGGGCTCTGGAACAGACATGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: SIELSHLWEVTL*LHGALEQTWEL
Trigger: CAGCTCCCATGTCTGTTCCAGAGCCCCATGCAGCCACAGCGTCACCTCCCACAGATGGGACAACTCGATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp ACCTCCTCCCGTTTGGCCAACTTGCTCACGGCCGTCTaGGTAGTGGCTTTGAGGCTCTCCTTGCTATCAGCC +
Preference number: 6 (lower is better)
Translates to: TSSRLANLLTAV*VVALRLSLLSA
Trigger: GGCTGATAGCAAGGAGAGCCTCAAAGCCACTACCAAGACGGCCGTGAGCAAGTTGGCCAAACGGGAGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TCTAGCCCCTTCTGTGGTGAGGATTCCTGGAAATCCTaGAAGTCTGAGGCCCAGGGGCTCCGGGTTGCGTGT +
Preference number: 6 (lower is better)
Translates to: SSPFCGEDSWKS*KSEAQGLRVAC
Trigger: ACACGCAACCCGGAGCCCCTGGGCCTCAGACTTCAAGGATTTCCAGGAATCCTCACCACAGAAGGGGCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp CCGTGGTGGCATGGCTTTTGCTGGCCTCTGGTACCTTaGAGCTGTGTGAGCTTTTGTCAGGAGCCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: PWWHGFCWPLVP*SCVSFCQEPQP
Trigger: GGGCTGAGGCTCCTGACAAAAGCTCACACAGCTCAAAGGTACCAGAGGCCAGCAAAAGCCATGCCACCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp AGCTCTGCCACTTTGCGCTGCAGTAGTCCATTGATGCCTGGCAGGTaGTCTGCCCCAATGTGTGTGAGTAGCACCGAGTCAATGCGGTCC +
Preference number: 6 (lower is better)
Translates to: SSATLRCSSPLMPGR*SAPMCVSSTESMRS
Trigger: GGACCGCATTGACTCGGTGCTACTCACACACATTGGGGCAGACAACCTGCCAGGCATCAATGGACTACTGCAGCGCAAAGTGGCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp TTGAGGCTCTCCTTGCTATCAGCCCGCTGTTTGATTTTGCTGGGCTaGAGGTTGGTAGGCACAGCCCCAGAAGCCAGGTCCTTCTGCGTG +
Preference number: 6 (lower is better)
Translates to: LRLSLLSARCLILLG*RLVGTAPEARSFCV
Trigger: CACGCAGAAGGACCTGGCTTCTGGGGCTGTGCCTACCAACCTCAAGCCCAGCAAAATCAAACAGCGGGCTGATAGCAAGGAGAGCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp GTAGTGGCTTTGAGGCTCTCCTTGCTATCAGCCCGCTGTTTGATTTaGCTGGGCTTGAGGTTGGTAGGCACAGCCCCAGAAGCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: VVALRLSLLSARCLI*LGLRLVGTAPEARS
Trigger: GGACCTGGCTTCTGGGGCTGTGCCTACCAACCTCAAGCCCAGCAAAATCAAACAGCGGGCTGATAGCAAGGAGAGCCTCAAAGCCACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp TCCTCCCGTTTGGCCAACTTGCTCACGGCCGTCTTGGTAGTGGCTTaGAGGCTCTCCTTGCTATCAGCCCGCTGTTTGATTTTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SSRLANLLTAVLVVA*RLSLLSARCLILLG
Trigger: GCCCAGCAAAATCAAACAGCGGGCTGATAGCAAGGAGAGCCTCAAAGCCACTACCAAGACGGCCGTGAGCAAGTTGGCCAAACGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp TCTTCTACCACCTCCTCCCGTTTGGCCAACTTGCTCACGGCCGTCTaGGTAGTGGCTTTGAGGCTCTCCTTGCTATCAGCCCGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: SSTTSSRLANLLTAV*VVALRLSLLSARCL
Trigger: CAAACAGCGGGCTGATAGCAAGGAGAGCCTCAAAGCCACTACCAAGACGGCCGTGAGCAAGTTGGCCAAACGGGAGGAGGTGGTAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp GGGGAAGCTGGAGGGGAGATGATCTCAAAGGGAGAGCGGGTCAGTTaGTCCTCTTCCTCTGGTGGCAACCCAACTGGTGATTCAGCAAGC +
Preference number: 6 (lower is better)
Translates to: GEAGGEMISKGERVS*SSSSGGNPTGDSAS
Trigger: GCTTGCTGAATCACCAGTTGGGTTGCCACCAGAGGAAGAGGACAAACTGACCCGCTCTCCCTTTGAGATCATCTCCCCTCCAGCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp GCTCAGGCTCCGTGGTGGCATGGCTTTTGCTGGCCTCTGGTACCTTaGAGCTGTGTGAGCTTTTGTCAGGAGCCTCAGCCCTACCTTCTT +
Preference number: 6 (lower is better)
Translates to: AQAPWWHGFCWPLVP*SCVSFCQEPQPYLL
Trigger: AAGAAGGTAGGGCTGAGGCTCCTGACAAAAGCTCACACAGCTCAAAGGTACCAGAGGCCAGCAAAAGCCATGCCACCACGGAGCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp CCCTCTCCTCACGCTTCATCTCCTCAAAGTCCTGTGTaGGGTCCTCTGGTGAGGATAGGACCAGCTCCCTGT +
Preference number: 6 (lower is better)
Translates to: PSPHASSPQSPV*GPLVRIGPAPC
Trigger: ACAGGGAGCTGGTCCTATCCTCACCAGAGGACCTCACACAGGACTTTGAGGAGATGAAGCGTGAGGAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp CTGTGCAGAGTATCGAGTTGTCCCATCTGTGGGAGGTaGCGCTGTGGCTGCATGGGGCTCTGGAACAGACAT +
Preference number: 6 (lower is better)
Translates to: LCRVSSCPICGR*RCGCMGLWNRH
Trigger: ATGTCTGTTCCAGAGCCCCATGCAGCCACAGCGTCACCTCCCACAGATGGGACAACTCGATACTCTGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp GTCCTTGGGCACCCAGGGTGGGATGTCAGCCAGCCATaGGGGAGTAGTGGGTTCATTCTTCATGTGTGGCAT +
Preference number: 6 (lower is better)
Translates to: VLGHPGWDVSQP*GSSGFILHVWH
Trigger: ATGCCACACATGAAGAATGAACCCACTACTCCCTCATGGCTGGCTGACATCCCACCCTGGGTGCCCAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp GTCTGGGGAGGGCACGCTGAGGACAGAGAGGGATTCTaGATCTTCAGGAGAGAGGCTTCGGTCAGGATATCT +
Preference number: 6 (lower is better)
Translates to: VWGGHAEDREGF*IFRREASVRIS
Trigger: AGATATCCTGACCGAAGCCTCTCTCCTGAAGATGCAGAATCCCTCTCTGTCCTCAGCGTGCCCTCCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp ATACCTATTGTCCTGCTCAGGAGATGTGTCCTCCCATaGCGGGGCAAGCTCTTTCTGTTCTCCAGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: IPIVLLRRCVLP*RGKLFLFSSRL
Trigger: GAGCCGGCTGGAGAACAGAAAGAGCTTGCCCCGGCATGGGAGGACACATCTCCTGAGCAGGACAATAGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp CAGGGTTTAGCCGGAGGTGCAGGGTCTCTTGGGAACTaGATAATCCCAGGTGGCTCCAATCACCTTCCCCTA +
Preference number: 6 (lower is better)
Translates to: QGLAGGAGSLGN*IIPGGSNHLPL
Trigger: TAGGGGAAGGTGATTGGAGCCACCTGGGATTATCCAGTTCCCAAGAGACCCTGCACCTCCGGCTAAACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp AATCTGGGTGGAGCTGGGCGCTCCTCCGGCTCATCATaGATCTCCTCATCTGAGATGGTCTGCTCAGTCTCT +
Preference number: 6 (lower is better)
Translates to: NLGGAGRSSGSS*ISSSEMVCSVS
Trigger: AGAGACTGAGCAGACCATCTCAGATGAGGAGATCCATGATGAGCCGGAGGAGCGCCCAGCTCCACCCAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp TGTCTGTCTGTGCAGAGTATCGAGTTGTCCCATCTGTaGGAGGTGACGCTGTGGCTGCATGGGGCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: CLSVQSIELSHL*EVTLWLHGALE
Trigger: TTCCAGAGCCCCATGCAGCCACAGCGTCACCTCCCACAGATGGGACAACTCGATACTCTGCACAGACAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TCCTTGCTATCAGCCCGCTGTTTGATTTTGCTGGGCTaGAGGTTGGTAGGCACAGCCCCAGAAGCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SLLSARCLILLG*RLVGTAPEARS
Trigger: GGACCTGGCTTCTGGGGCTGTGCCTACCAACCTCAAGCCCAGCAAAATCAAACAGCGGGCTGATAGCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TTGTGTAGGTACTGTTCTGTCAGGCCACAGGGAGACTaGGGGGTAGGCTCTTGGTTGGCAGTGTCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: LCRYCSVRPQGD*GVGSWLAVSGE
Trigger: CTCCCCAGACACTGCCAACCAAGAGCCTACCCCCAAGTCTCCCTGTGGCCTGACAGAACAGTACCTACACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp CTTAGGGTCTGGGATAGGACTCTCTTGTCCTGGGGCTaGAGGAACCCTTTGTCCAACCATCTCAGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: LRVWDRTLLSWG*RNPLSNHLRWG
Trigger: TCCCCACCTGAGATGGTTGGACAAAGGGTTCCTTCAGCCCCAGGACAAGAGAGTCCTATCCCAGACCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp GGATTTACCAGGATGATGGTCTCTAGGATCTCACTCTaGTGGCAAAGGGTCCTCTGGCCCTGGGGTGTAGGA +
Preference number: 6 (lower is better)
Translates to: GFTRMMVSRISL*WQRVLWPWGVG
Trigger: TCCTACACCCCAGGGCCAGAGGACCCTTTGCCACCAGAGTGAGATCCTAGAGACCATCATCCTGGTAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300231.6
CDS CCA 72 bp CTCCTGAAAGTCTTGGGGCTCAGACTTTTCTTCCACTaGGGACTGATGAAAGGGTGTGTGGGTGGCACTGGG +
Preference number: 6 (lower is better)
Translates to: LLKVLGLRLFFH*GLMKGCVGGTG
Trigger: CCCAGTGCCACCCACACACCCTTTCATCAGTCCCCAGTGGAAGAAAAGTCTGAGCCCCAAGACTTTCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp CAGTCTGCTCAGGCTCCGTGGTGGCATGGCTTTTGCTaGCCTCTGGTACCTTTGAGCTGTGTGAGCTTTTGT +
Preference number: 6 (lower is better)
Translates to: QSAQAPWWHGFC*PLVPLSCVSFC
Trigger: ACAAAAGCTCACACAGCTCAAAGGTACCAGAGGCCAGCAAAAGCCATGCCACCACGGAGCCTGAGCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp CTGCATACTGAAAGCTTCTCTCATCAGGATAGGGTGTaGGCTCTCTCTGCTCCGGCTCAGTCTGCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: LHTESFSHQDRV*ALSAPAQSAQA
Trigger: AGCCTGAGCAGACTGAGCCGGAGCAGAGAGAGCCCACACCCTATCCTGATGAGAGAAGCTTTCAGTATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TCCTCTAGCTCTGCCACTTTGCGCTGCAGTAGTCCATaGATGCCTGGCAGGTTGTCTGCCCCAATGTGTGTG +
Preference number: 6 (lower is better)
Translates to: SSSSATLRCSSP*MPGRLSAPMCV
Trigger: CACACACATTGGGGCAGACAACCTGCCAGGCATCAATGGACTACTGCAGCGCAAAGTGGCAGAGCTAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp GTGGCTTTGAGGCTCTCCTTGCTATCAGCCCGCTGTTaGATTTTGCTGGGCTTGAGGTTGGTAGGCACAGCC +
Preference number: 6 (lower is better)
Translates to: VALRLSLLSARC*ILLGLRLVGTA
Trigger: GGCTGTGCCTACCAACCTCAAGCCCAGCAAAATCAAACAGCGGGCTGATAGCAAGGAGAGCCTCAAAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp GGAGGGGAGATGATCTCAAAGGGAGAGCGGGTCAGTTaGTCCTCTTCCTCTGGTGGCAACCCAACTGGTGAT +
Preference number: 6 (lower is better)
Translates to: GGEMISKGERVS*SSSSGGNPTGD
Trigger: ATCACCAGTTGGGTTGCCACCAGAGGAAGAGGACAAACTGACCCGCTCTCCCTTTGAGATCATCTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp GCCTCCTTCCCATTGGGCAGCACGATGCCTGTCTTGGCTTTACTATaGCCTGCCCACTTTTGCATGAGGAACTGCATCTCCTTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: ASFPLGSTMPVLALL*PAHFCMRNCISLLS
Trigger: GGACAGCAAGGAGATGCAGTTCCTCATGCAAAAGTGGGCAGGCAATAGTAAAGCCAAGACAGGCATCGTGCTGCCCAATGGGAAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp GCCAACTTGCTCACGGCCGTCTTGGTAGTGGCTTTGAGGCTCTCCTaGCTATCAGCCCGCTGTTTGATTTTGCTGGGCTTGAGGTTGGTA +
Preference number: 6 (lower is better)
Translates to: ANLLTAVLVVALRLS*LSARCLILLGLRLV
Trigger: TACCAACCTCAAGCCCAGCAAAATCAAACAGCGGGCTGATAGCAAGGAGAGCCTCAAAGCCACTACCAAGACGGCCGTGAGCAAGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp CGGAGATCTCAGCCTCCTTCCCATTGGGCAGCACGATaGCTGTCTTGGCTTTACTATTGCCTGCCCACTTTT +
Preference number: 6 (lower is better)
Translates to: RRSQPPSHWAAR*LSWLYYCLPTF
Trigger: AAAAGTGGGCAGGCAATAGTAAAGCCAAGACAGGCATCGTGCTGCCCAATGGGAAGGAGGCTGAGATCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp CACGCACTCGACGGAAGAAGTCAAGGTCAGCAGTCTTaGCACTGCAATGATTCGGGATGTAGGCGAGATCCA +
Preference number: 6 (lower is better)
Translates to: HALDGRSQGQQS*HCNDSGCRRDP
Trigger: TGGATCTCGCCTACATCCCGAATCATTGCAGTGGCAAGACTGCTGACCTTGACTTCTTCCGTCGAGTGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp ATGGTATTGCTGACCACACGATATAGAGGCTCAGCCTaGATGCCCAGGCGGTTTAAGTGCTGCAGAGTGAGG +
Preference number: 6 (lower is better)
Translates to: MVLLTTRYRGSA*MPRRFKCCRVR
Trigger: CCTCACTCTGCAGCACTTAAACCGCCTGGGCATCCAGGCTGAGCCTCTATATCGTGTGGTCAGCAATACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp GCTCCTCCGGCTCATCATGGATCTCCTCATCTGAGATaGTCTGCTCAGTCTCTGAGTAGCCAGGGATTGTCT +
Preference number: 6 (lower is better)
Translates to: APPAHHGSPHLR*SAQSLSSQGLS
Trigger: AGACAATCCCTGGCTACTCAGAGACTGAGCAGACCATCTCAGATGAGGAGATCCATGATGAGCCGGAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp ACTTTGCGCTGCAGTAGTCCATTGATGCCTGGCAGGTaGTCTGCCCCAATGTGTGTGAGTAGCACCGAGTCA +
Preference number: 6 (lower is better)
Translates to: TLRCSSPLMPGR*SAPMCVSSTES
Trigger: TGACTCGGTGCTACTCACACACATTGGGGCAGACAACCTGCCAGGCATCAATGGACTACTGCAGCGCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp CGGGAGGCATCAGGAAGCCGCAGCTTCTCAGGCACGTaGAAAAAGACAACTCCAAGCTCAGGAGAGATAAGG +
Preference number: 6 (lower is better)
Translates to: REASGSRSFSGT*KKTTPSSGEIR
Trigger: CCTTATCTCTCCTGAGCTTGGAGTTGTCTTTTTCAACGTGCCTGAGAAGCTGCGGCTTCCTGATGCCTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TCAGCCTCCTTCCCATTGGGCAGCACGATGCCTGTCTaGGCTTTACTATTGCCTGCCCACTTTTGCATGAGG +
Preference number: 6 (lower is better)
Translates to: SASFPLGSTMPV*ALLLPAHFCMR
Trigger: CCTCATGCAAAAGTGGGCAGGCAATAGTAAAGCCAAGACAGGCATCGTGCTGCCCAATGGGAAGGAGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TTGAGGCTCTCCTTGCTATCAGCCCGCTGTTTGATTTaGCTGGGCTTGAGGTTGGTAGGCACAGCCCCAGAA +
Preference number: 6 (lower is better)
Translates to: LRLSLLSARCLI*LGLRLVGTAPE
Trigger: TTCTGGGGCTGTGCCTACCAACCTCAAGCCCAGCAAAATCAAACAGCGGGCTGATAGCAAGGAGAGCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TTGGCCAACTTGCTCACGGCCGTCTTGGTAGTGGCTTaGAGGCTCTCCTTGCTATCAGCCCGCTGTTTGATT +
Preference number: 6 (lower is better)
Translates to: LANLLTAVLVVA*RLSLLSARCLI
Trigger: AATCAAACAGCGGGCTGATAGCAAGGAGAGCCTCAAAGCCACTACCAAGACGGCCGTGAGCAAGTTGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TGGGTGTCTTCTGGAGATACCTCTGGCCAACGGTCTTaGTGTAGGTACTGTTCTGTCAGGCCACAGGGAGAC +
Preference number: 6 (lower is better)
Translates to: WVSSGDTSGQRS*CRYCSVRPQGD
Trigger: GTCTCCCTGTGGCCTGACAGAACAGTACCTACACAAAGACCGTTGGCCAGAGGTATCTCCAGAAGACACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp GCCATTGGTCCTGCCTTGAGTCCATTGACTAGGCCTTaGGACATGGGGCTGTGTCCATCCTTTTCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: AIGPALSPLTRP*DMGLCPSFSSA
Trigger: AGCAGAGGAAAAGGATGGACACAGCCCCATGTCCAAAGGCCTAGTCAATGGACTCAAGGCAGGACCAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TTGGAACTCAAGGCCATTGGTCCTGCCTTGAGTCCATaGACTAGGCCTTTGGACATGGGGCTGTGTCCATCC +
Preference number: 6 (lower is better)
Translates to: LELKAIGPALSP*TRPLDMGLCPS
Trigger: GGATGGACACAGCCCCATGTCCAAAGGCCTAGTCAATGGACTCAAGGCAGGACCAATGGCCTTGAGTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp ACGGAGATCTCAGCCTCCTTCCCATTGGGCAGCACGATGCCTGTCTaGGCTTTACTATTGCCTGCCCACTTTTGCATGAGGAACTGCATC +
Preference number: 6 (lower is better)
Translates to: TEISASFPLGSTMPV*ALLLPAHFCMRNCI
Trigger: GATGCAGTTCCTCATGCAAAAGTGGGCAGGCAATAGTAAAGCCAAGACAGGCATCGTGCTGCCCAATGGGAAGGAGGCTGAGATCTCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp AGGGACCTCTGGGACAAGCTCTTTCTCCTTCATCACATGTTCTTCTaGTCCCAGCCCTGGAACAGAGGGTGGTGTTCCCTGGATAGCTGT +
Preference number: 6 (lower is better)
Translates to: RDLWDKLFLLHHMFF*SQPWNRGWCSLDSC
Trigger: ACAGCTATCCAGGGAACACCACCCTCTGTTCCAGGGCTGGGACAAGAAGAACATGTGATGAAGGAGAAAGAGCTTGTCCCAGAGGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp GAAAGTGACTGGGTGTCTTCTGGAGATACCTCTGGCCAACGGTCTTaGTGTAGGTACTGTTCTGTCAGGCCACAGGGAGACTTGGGGGTA +
Preference number: 6 (lower is better)
Translates to: ESDWVSSGDTSGQRS*CRYCSVRPQGDLGV
Trigger: TACCCCCAAGTCTCCCTGTGGCCTGACAGAACAGTACCTACACAAAGACCGTTGGCCAGAGGTATCTCCAGAAGACACCCAGTCACTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp GGGCAGCACGATGCCTGTCTTGGCTTTACTATTGCCTaGCCACTTTTGCATGAGGAACTGCATCTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: GQHDACLGFTIA*PLLHEELHLLA
Trigger: AGCAAGGAGATGCAGTTCCTCATGCAAAAGTGGGCAGGCAATAGTAAAGCCAAGACAGGCATCGTGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp TCCAGTATGTGTCCTGTTCCAAGGCCACATCCTCTCTaGCCCTCCAATACCTATTGTCCTGCTCAGGAGATG +
Preference number: 6 (lower is better)
Translates to: SSMCPVPRPHPL*PSNTYCPAQEM
Trigger: CATCTCCTGAGCAGGACAATAGGTATTGGAGGGGCAGAGAGGATGTGGCCTTGGAACAGGACACATACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp CAGGTCATATGTACTTGTATGAAATCTGGGTGGAGCTaGGCGCTCCTCCGGCTCATCATGGATCTCCTCATC +
Preference number: 6 (lower is better)
Translates to: QVICTCMKSGWS*ALLRLIMDLLI
Trigger: GATGAGGAGATCCATGATGAGCCGGAGGAGCGCCCAGCTCCACCCAGATTTCATACAAGTACATATGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp CCTCCAAGGCAGGGCCTGGCAAAGACTCAGGACTCTTaGAGAAGGAGCTATCAGGTGTCAGAATGTGTTCAT +
Preference number: 6 (lower is better)
Translates to: PPRQGLAKTQDS*RRSYQVSECVH
Trigger: ATGAACACATTCTGACACCTGATAGCTCCTTCTCCAAGAGTCCTGAGTCTTTGCCAGGCCCTGCCTTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp TTTACCAGGATGATGGTCTCTAGGATCTCACTCTGGTaGCAAAGGGTCCTCTGGCCTTTGACCTCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: FTRMMVSRISLW*QRVLWPLTSEE
Trigger: CTCCTCAGAGGTCAAAGGCCAGAGGACCCTTTGCCACCAGAGTGAGATCCTAGAGACCATCATCCTGGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS CCA 72 bp GGATTTACCAGGATGATGGTCTCTAGGATCTCACTCTaGTGGCAAAGGGTCCTCTGGCCTTTGACCTCTGAG +
Preference number: 6 (lower is better)
Translates to: GFTRMMVSRISL*WQRVLWPLTSE
Trigger: CTCAGAGGTCAAAGGCCAGAGGACCCTTTGCCACCAGAGTGAGATCCTAGAGACCATCATCCTGGTAAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382031.5
CDS CAA 72 bp CCATTGGGCAGCACGATGCCTGTCTTGGCTTTACTATaGCCTGCCCACTTTTGCATGAGGAACTGCATCTCC +
Preference number: 6 (lower is better)
Translates to: PLGSTMPVLALL*PAHFCMRNCIS
Trigger: GGAGATGCAGTTCCTCATGCAAAAGTGGGCAGGCAATAGTAAAGCCAAGACAGGCATCGTGCTGCCCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp CCTGGAAAAAGCACACGCACAATCTTCTCAGTGGGATaGGCTGGTAGCCAGACCACCAGAGCAGTGATAGAG +
Preference number: 6 (lower is better)
Translates to: PGKSTRTIFSVG*AGSQTTRAVIE
Trigger: CTCTATCACTGCTCTGGTGGTCTGGCTACCAGCCAATCCCACTGAGAAGATTGTGCGTGTGCTTTTTCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TCCTCCAAGGCAGGGCCTGGCAAAGACTCAGGACTCTaGGAGAAGGAGCTATCAGGTGTCAGAATGTGTTCA +
Preference number: 6 (lower is better)
Translates to: SSKAGPGKDSGL*EKELSGVRMCS
Trigger: TGAACACATTCTGACACCTGATAGCTCCTTCTCCAAGAGTCCTGAGTCTTTGCCAGGCCCTGCCTTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp TTCCAAAAACAGGACTTGCGATCAGAGCCACCATCCACCAGGATGTaGAAACCATTGACAGCAAAGAGGGCAGAGTCCCCACGACCACCT +
Preference number: 6 (lower is better)
Translates to: FQKQDLRSEPPSTRM*KPLTAKRAESPRPP
Trigger: AGGTGGTCGTGGGGACTCTGCCCTCTTTGCTGTCAATGGTTTCAACATCCTGGTGGATGGTGGCTCTGATCGCAAGTCCTGTTTTTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp TTGGCTTTCCGGGAGGCATCAGGAAGCCGCAGCTTCTCAGGCACGTaGAAAAAGACAACTCCAAGCTCAGGAGAGATAAGGTTCTTCACC +
Preference number: 6 (lower is better)
Translates to: LAFREASGSRSFSGT*KKTTPSSGEIRFFT
Trigger: GGTGAAGAACCTTATCTCTCCTGAGCTTGGAGTTGTCTTTTTCAACGTGCCTGAGAAGCTGCGGCTTCCTGATGCCTCCCGGAAAGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp ATGGCAATGTCCTCCAAGGCAGGGCCTGGCAAAGACTCAGGACTCTaGGAGAAGGAGCTATCAGGTGTCAGAATGTGTTCATCAGGGCTT +
Preference number: 6 (lower is better)
Translates to: MAMSSKAGPGKDSGL*EKELSGVRMCSSGL
Trigger: AAGCCCTGATGAACACATTCTGACACCTGATAGCTCCTTCTCCAAGAGTCCTGAGTCTTTGCCAGGCCCTGCCTTGGAGGACATTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp AGCCAGGACCAGGACATTCAGTTGTTGCTGCTGCTCATGAGTTTGTaGGTACCACTCACGAGTCACCTCCGTGTCATGAGTAGGGATCAG +
Preference number: 6 (lower is better)
Translates to: SQDQDIQLLLLLMSL*VPLTSHLRVMSRDQ
Trigger: CTGATCCCTACTCATGACACGGAGGTGACTCGTGAGTGGTACCAACAAACTCATGAGCAGCAGCAACAACTGAATGTCCTGGTCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp GCTAGCCAGGACCAGGACATTCAGTTGTTGCTGCTGCTCATGAGTTaGTTGGTACCACTCACGAGTCACCTCCGTGTCATGAGTAGGGAT +
Preference number: 6 (lower is better)
Translates to: ASQDQDIQLLLLLMS*LVPLTSHLRVMSRD
Trigger: ATCCCTACTCATGACACGGAGGTGACTCGTGAGTGGTACCAACAAACTCATGAGCAGCAGCAACAACTGAATGTCCTGGTCCTGGCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp TTTTGTGGAAGAGGGTCAGTGGCTCAATGGTATTGCTaGCCACACGATATAGAGGCTCAGCCTGGATGCCCA +
Preference number: 6 (lower is better)
Translates to: FCGRGSVAQWYC*PHDIEAQPGCP
Trigger: TGGGCATCCAGGCTGAGCCTCTATATCGTGTGGTCAGCAATACCATTGAGCCACTGACCCTCTTCCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp GGATTGTCTCATCCTGGATGTAAGAGACATGCTCAGTaGCTCCTGCAGGTGTGGTCAGGCTGCTTAGGAATA +
Preference number: 6 (lower is better)
Translates to: GLSHPGCKRHAQ*LLQVWSGCLGI
Trigger: TATTCCTAAGCAGCCTGACCACACCTGCAGGAGCCACTGAGCATGTCTCTTACATCCAGGATGAGACAATCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp AGCCACTATGTTAGTGGGGTAGGTGAGTTCAGTCTCTaGCGTTCCATAGACTTTGCCAGAGGTAGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: SHYVSGVGEFSL*RSIDFARGSRN
Trigger: GTTCCTGCTACCTCTGGCAAAGTCTATGGAACGCCAGAGACTGAACTCACCTACCCCACTAACATAGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp CCCATTTTGTGGAAGAGGGTCAGTGGCTCAATGGTATaGCTGACCACACGATATAGAGGCTCAGCCTGGATG +
Preference number: 6 (lower is better)
Translates to: PILWKRVSGSMV*LTTRYRGSAWM
Trigger: CATCCAGGCTGAGCCTCTATATCGTGTGGTCAGCAATACCATTGAGCCACTGACCCTCTTCCACAAAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp TTGCCTGCCCACTTTTGCATGAGGAACTGCATCTCCTaGCTGTCCTTGACAGGGTTGAGGACATACATGTCC +
Preference number: 6 (lower is better)
Translates to: LPAHFCMRNCIS*LSLTGLRTYMS
Trigger: GGACATGTATGTCCTCAACCCTGTCAAGGACAGCAAGGAGATGCAGTTCCTCATGCAAAAGTGGGCAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp GACCAGGACATTCAGTTGTTGCTGCTGCTCATGAGTTaGTTGGTACCACTCACGAGTCACCTCCGTGTCATG +
Preference number: 6 (lower is better)
Translates to: DQDIQLLLLLMS*LVPLTSHLRVM
Trigger: CATGACACGGAGGTGACTCGTGAGTGGTACCAACAAACTCATGAGCAGCAGCAACAACTGAATGTCCTGGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp GCCACAGATTGGTCCTCAGCCACTGATGTGGCAAAGGAAGAAAGTTaGTCACACTCAGTGATTGAAGTGGCCGAGGACACATGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: ATDWSSATDVAKEES*SHSVIEVAEDTCSS
Trigger: AGAGGAACATGTGTCCTCGGCCACTTCAATCACTGAGTGTGACAAACTTTCTTCCTTTGCCACATCAGTGGCTGAGGACCAATCTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp GCTTTACTATTGCCTGCCCACTTTTGCATGAGGAACTaGATCTCCTTGCTGTCCTTGACAGGGTTGAGGACA +
Preference number: 6 (lower is better)
Translates to: ALLLPAHFCMRN*ISLLSLTGLRT
Trigger: TGTCCTCAACCCTGTCAAGGACAGCAAGGAGATGCAGTTCCTCATGCAAAAGTGGGCAGGCAATAGTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp CTCGACGGAAGAAGTCAAGGTCAGCAGTCTTGCCACTaGAATGATTCGGGATGTAGGCGAGATCCACATATA +
Preference number: 6 (lower is better)
Translates to: LDGRSQGQQSCH*NDSGCRRDPHI
Trigger: TATATGTGGATCTCGCCTACATCCCGAATCATTGCAGTGGCAAGACTGCTGACCTTGACTTCTTCCGTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp TTTCTCCTTCATCACATGTTCTTCTTGTCCCAGCCCTaGAACAGAGGGTGGTGTTCCCTGGATAGCTGTACT +
Preference number: 6 (lower is better)
Translates to: FLLHHMFFLSQP*NRGWCSLDSCT
Trigger: AGTACAGCTATCCAGGGAACACCACCCTCTGTTCCAGGGCTGGGACAAGAAGAACATGTGATGAAGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp CCTTCAAGGGTTCCTGCATATGTTTTTGGTAAAAACCCTCAGCTTTaGTCGCGTCCTCTTCCTCCTCATCTGAAGGGTGTACCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PSRVPAYVFGKNPQL*SRPLPPHLKGVPPP
Trigger: TGGAGGAGGTACACCCTTCAGATGAGGAGGAAGAGGACGCGACAAAAGCTGAGGGTTTTTACCAAAAACATATGCAGGAACCCTTGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp ACTTTATCCTTTTGTTCCTGGGCCTGGTGTTTCTGTTCAGGGGCTTaGTCTGTCTGTTCTAGGTCTCTGTCCTTCATTTCAGCGACCGTG +
Preference number: 6 (lower is better)
Translates to: TLSFCSWAWCFCSGA*SVCSRSLSFISATV
Trigger: CACGGTCGCTGAAATGAAGGACAGAGACCTAGAACAGACAGACAAAGCCCCTGAACAGAAACACCAGGCCCAGGAACAAAAGGATAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp CAAAGTTTTCATATGAGTAGGTGCCACTCTGTAGGATaGGGTCTCCCCCAGGCTCTAAACTTTGCCCACTCA +
Preference number: 6 (lower is better)
Translates to: QSFHMSRCHSVG*GLPQALNFAHS
Trigger: TGAGTGGGCAAAGTTTAGAGCCTGGGGGAGACCTCATCCTACAGAGTGGCACCTACTCATATGAAAACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp AGGCTTCGGTCAGGATATCTGAGCACCTCATCTTTCTaGGGTTTGCCAGGTTCTTGGGGTAAAGTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: RLRSGYLSTSSF*GLPGSWGKVLK
Trigger: TTTGAGGACTTTACCCCAAGAACCTGGCAAACCTCAGAAAGATGAGGTGCTCAGATATCCTGACCGAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp AGCTATCAGGTGTCAGAATGTGTTCATCAGGGCTTGTaGTCGCCCCAGGTAAGTACTTCCCATTTCCTGAAG +
Preference number: 6 (lower is better)
Translates to: SYQVSECVHQGL*SPQVSTSHFLK
Trigger: CTTCAGGAAATGGGAAGTACTTACCTGGGGCGATCACAAGCCCTGATGAACACATTCTGACACCTGATAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp GGCATGCCCAGGGGCACTAAACACTGGAGTTCCATATaGACTGCAAAGTTTCTCAGACATCTCTACGTTTGC +
Preference number: 6 (lower is better)
Translates to: GMPRGTKHWSSI*TAKFLRHLYVC
Trigger: GCAAACGTAGAGATGTCTGAGAAACTTTGCAGTCAATATGGAACTCCAGTGTTTAGTGCCCCTGGGCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp ATGGCTGTATCCTTCGGCTCTACCACCTCCTTGTGCTCCAGAGTTTaGTCTTTCTGCTGTAAAACTTCATCCTTTGGCTCAGGTTCCTTC +
Preference number: 6 (lower is better)
Translates to: MAVSFGSTTSLCSRV*SFCCKTSSFGSGSF
Trigger: GAAGGAACCTGAGCCAAAGGATGAAGTTTTACAGCAGAAAGACAAAACTCTGGAGCACAAGGAGGTGGTAGAGCCGAAGGATACAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 90 bp ATCTTCTTGAGCTCAGGTTTGGTATCTTTCCTCTTCTCCTCCTTCTaGGCATCCTTCTTCTCCTCCTTCCTTCCTTCATCCTTCTTGAGC +
Preference number: 6 (lower is better)
Translates to: IFLSSGLVSFLFSSF*ASFFSSFLPSSFLS
Trigger: GCTCAAGAAGGATGAAGGAAGGAAGGAGGAGAAGAAGGATGCCAAGAAGGAGGAGAAGAGGAAAGATACCAAACCTGAGCTCAAGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp TGTGGCAAAGGAAGAAAGTTTGTCACACTCAGTGATTaGAGTGGCCGAGGACACATGTTCCTCTTCAGCCAA +
Preference number: 6 (lower is better)
Translates to: CGKGRKFVTLSD*SGRGHMFLFSQ
Trigger: TTGGCTGAAGAGGAACATGTGTCCTCGGCCACTTCAATCACTGAGTGTGACAAACTTTCTTCCTTTGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp CTGATGTGGCAAAGGAAGAAAGTTTGTCACACTCAGTaGTTGAAGTGGCCGAGGACACATGTTCCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: LMWQRKKVCHTQ*LKWPRTHVPLQ
Trigger: CTGAAGAGGAACATGTGTCCTCGGCCACTTCAATCACTGAGTGTGACAAACTTTCTTCCTTTGCCACATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CCA 72 bp CATTCTTTACATGCAGAGCCTCATCTTTCTGATAGATaGCTGTATCCTTCGGCTCTACCACCTCCTTGTGCT +
Preference number: 6 (lower is better)
Translates to: HSLHAEPHLSDR*LYPSALPPPCA
Trigger: AGCACAAGGAGGTGGTAGAGCCGAAGGATACAGCCATCTATCAGAAAGATGAGGCTCTGCATGTAAAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS CAA 72 bp GTTCCTGCATATGTTTTTGGTAAAAACCCTCAGCTTTaGTCGCGTCCTCTTCCTCCTCATCTGAAGGGTGTA +
Preference number: 6 (lower is better)
Translates to: VPAYVFGKNPQL*SRPLPPHLKGV
Trigger: TACACCCTTCAGATGAGGAGGAAGAGGACGCGACAAAAGCTGAGGGTTTTTACCAAAAACATATGCAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS GCA 72 bp TCTAAGTCTCTGCCCTTTTGTTCTAAAGCCTTATCCTaGTGTTTCACAGCCTCATTCTTTACATGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: SKSLPFCSKALS*CFTASFFTCRA
Trigger: GGCTCTGCATGTAAAGAATGAGGCTGTGAAACAGCAGGATAAGGCTTTAGAACAAAAGGGCAGAGACTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5
CDS TCA 72 bp AACTTCATCCTTTGGCTCAGGTTCCTTCTTCTGTTCTaGGGTTCTGTCTTTCAACCCTGGAACTTTATCTTC +
Preference number: 6 (lower is better)
Translates to: NFILWLRFLLLF*GSVFQPWNFIF
Trigger: GAAGATAAAGTTCCAGGGTTGAAAGACAGAACCTCAGAACAGAAGAAGGAACCTGAGCCAAAGGATGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300231.6
ENST00000382031.5