RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAOA (Homo sapiens)

Ensembl gene IDs: ENSG00000189221

Ensembl transcript IDs: ENST00000338702.4, ENST00000490604.1, ENST00000497485.1, ENST00000542639.5

Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCAGGAGATTCCTGAGGCAGCAGACCACAAGATGTCCCCATTCTaGTCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTT +
Preference number: 1 (lower is better)
Translates to: GQEIPEAADHKMSPF*SEGLHAATPNTAFL
Trigger: AAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGACCAGAATGGGGACATCTTGTGGTCTGCTGCCTCAGGAATCTCCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR GCA 90 bp CCAGGAGGCTGTGAGCCTCTAGGCTCTGTAATGACAGTTCACCATTaGCTAAGGGAAGAAAAAGGACAGTTACAGGCTGGGCCTTCACCT +
Preference number: 1 (lower is better)
Translates to: PGGCEPLGSVMTVHH*LREEKGQLQAGPSP
Trigger: AGGTGAAGGCCCAGCCTGTAACTGTCCTTTTTCTTCCCTTAGGCAATGGTGAACTGTCATTACAGAGCCTAGAGGCTCACAGCCTCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR GCA 90 bp AAGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTaGTCAACTGGAAAGCTGCACATAAGTCACAGCAAGTCAGTTTCA +
Preference number: 1 (lower is better)
Translates to: KQGVLLGDSPATIFL*STGKLHISHSKSVS
Trigger: TGAAACTGACTTGCTGTGACTTATGTGCAGCTTTCCAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR CCA 90 bp AGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTaGAAAGCTGCACATAAGTCACAGCAAGTCAGTTTCAACATTCTA +
Preference number: 1 (lower is better)
Translates to: SPPGGQSCHYFPLLN*KAAHKSQQVSFNIL
Trigger: TAGAATGTTGAAACTGACTTGCTGTGACTTATGTGCAGCTTTCCAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR GCA 90 bp AGGCTGGGCCTTCACCTACTCCACCTCCACAGACAGAAAGTCAAATaGTTTGTTTCTGAAATCATCATGTATTTTGCATTGAAGGGAATA +
Preference number: 1 (lower is better)
Translates to: RLGLHLLHLHRQKVK*FVSEIIMYFALKGI
Trigger: TATTCCCTTCAATGCAAAATACATGATGATTTCAGAAACAAAGCATTTGACTTTCTGTCTGTGGAGGTGGAGTAGGTGAAGGCCCAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR TCA 90 bp GAAGTGGATGCCTTAACAGGGCCAAGATCTATCAGCCTCTTAAACTaGCTTTCATTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTC +
Preference number: 1 (lower is better)
Translates to: EVDALTGPRSISLLN*LSFLWFREKAYGIF
Trigger: GAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAATGAAAGTCAGTTTAAGAGGCTGATAGATCTTGGCCCTGTTAAGGCATCCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR CCA 90 bp TTTCATTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTaGATGAACTTGCATATCGTGAGAGTCCTCAGCTCCAATTTCGTG +
Preference number: 1 (lower is better)
Translates to: FHFSGSEKKLMVSSR*MNLHIVRVLSSNFV
Trigger: CACGAAATTGGAGCTGAGGACTCTCACGATATGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR TCA 90 bp AGAAACAACTGCAATAGACTAGGGATGAGATTTCTCAAAGCAGTCTaGTATAATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAAT +
Preference number: 1 (lower is better)
Translates to: RNNCNRLGMRFLKAV*YNMRQLLMYWSVSN
Trigger: ATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATTATATCAGACTGCTTTGAGAAATCTCATCCCTAGTCTATTGCAGTTGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR CCA 90 bp ATCACACTAAACATAGTTCACAATCCTTCAATCCATACTCTTCAGTaGAGGATGAGGCCTTATTTAACAGTTAACTGGGACAGACAGATG +
Preference number: 1 (lower is better)
Translates to: ITLNIVHNPSIHTLQ*RMRPYLTVNWDRQM
Trigger: CATCTGTCTGTCCCAGTTAACTGTTAAATAAGGCCTCATCCTCCACTGAAGAGTATGGATTGAAGGATTGTGAACTATGTTTAGTGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGGTCCCCATTCTGGTCTaGGGGTCTGCATGCCGCTAC +
Preference number: 2 (lower is better)
Translates to: SCLPGGREDASRSWSPTEVPILV*GSACRY
Trigger: GTAGCGGCATGCAGACCCTCAGACCAGAATGGGGAC...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR GCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGCCTGGGGGACAGTCCTaGCACTATTTTCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: SCLPGGREDASRSWSPTEPGGQS*HYFPLL
Trigger: GAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGG...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGAGGACAGTTACAGGCTaGGCCTTCACCTACTCCACC +
Preference number: 2 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLRTVTG*AFTYST
Trigger: GGTGGAGTAGGTGAAGGCCCAGCCTGTAACTGTCCT...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGTCCTCTTGGTGGTATTaGAAACCAGTGAGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: SCLPGGREDASRSWSPTESSWWY*KPVSRE
Trigger: CTCTCTGCTCACTGGTTTTCAATACCACCAAGAGGA...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGAGGACAGTTACAGGCTaGGCCTTCACCTACTCCACC +
Preference number: 2 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLRTVTG*AFTYST
Trigger: GGTGGAGTAGGTGAAGGCCCAGCCTGTAACTGTCCT...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR GCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGCGCTACCCCCAACACTaGTTTCCTTTACTATTTCCT +
Preference number: 2 (lower is better)
Translates to: SCLPGGREDASRSWSPTERYPQH*FPLLFP
Trigger: AGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCG...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGGGTATTGAAAACCAGTaGGCAGAGAGCATAAGAACA +
Preference number: 2 (lower is better)
Translates to: SCLPGGREDASRSWSPTEGIENQ*AESIRT
Trigger: TGTTCTTATGCTCTCTGCTCACTGGTTTTCAATACC...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACACTGTGGAGTGGGGCTaGCTCAGCCTTCAGAACTGT +
Preference number: 2 (lower is better)
Translates to: QSTHIGILQRVALGQTSDTVEWG*LSLQNC
Trigger: ACAGTTCTGAAGGCTGAGTCAGCCCCACTCCACAGT...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGGTCCCCATTCTGGTCTaGGGGTCTGCATGCCGCTAC +
Preference number: 2 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRVPILV*GSACRY
Trigger: GTAGCGGCATGCAGACCCTCAGACCAGAATGGGGAC...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGGGTATTGAAAACCAGTaGGCAGAGAGCATAAGAACA +
Preference number: 2 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLGIENQ*AESIRT
Trigger: TGTTCTTATGCTCTCTGCTCACTGGTTTTCAATACC...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR GCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCTCTGGTCTGAGGGTCTaGATGCCGCTACCCCCAACA +
Preference number: 2 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLSGLRV*MPLPPT
Trigger: TGTTGGGGGTAGCGGCATGCAGACCCTCAGACCAGA...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR GCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACGCCACTATTTTCCTCTaGTCAACTGGAAAGCTGCAC +
Preference number: 2 (lower is better)
Translates to: QSTHIGILQRVALGQTSDATIFL*STGKLH
Trigger: GTGCAGCTTTCCAGTTGAGCAGAGGAAAATAGTGGC...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAGGGGAAAACAAGAGGTaGGCACCCTTGTGGGCCGAC +
Preference number: 2 (lower is better)
Translates to: FLWFREKAYGIFTLDELAGENKR*APLWAD
Trigger: GTCGGCCCACAAGGGTGCCCACCTCTTGTTTTCCCC...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR GCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCCCTGGGGGACAGTCCTaGCACTATTTTCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLPGGQS*HYFPLL
Trigger: GAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGG...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACGTTGGCTGGTTTCCCTaGCAATTGTTAATTCCCCTT +
Preference number: 2 (lower is better)
Translates to: QSTHIGILQRVALGQTSDVGWFP*QLLIPL
Trigger: AAGGGGAATTAACAATTGCCAGGGAAACCAGCCAAC...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCTGGTCAGGAGATTCCTaGGGCAGCAGACCACAAGAT +
Preference number: 2 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLWSGDS*GSRPQD
Trigger: ATCTTGTGGTCTGCTGCCTCAGGAATCTCCTGACCA...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGGATGCCAGTCGTAGTTaGTCTCCCACAGAGCTAAGC +
Preference number: 2 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRDASRS*SPTELS
Trigger: GCTTAGCTCTGTGGGAGACCAACTACGACTGGCATC...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR CAA 90 bp TCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTaGCATATCGTGAGAGTCCTCAGCTCCAATTTCGTGTCTAGGCAC +
Preference number: 2 (lower is better)
Translates to: SGSEKKLMVSSRWMN*HIVRVLSSNFVSRH
Trigger: GTGCCTAGACACGAAATTGGAGCTGAGGACTCTCACGATATGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCCTCCAGGAGGCTGTaGGCCTCTAGGCTCTGTAAT +
Preference number: 2 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSSSRRL*ASRLCN
Trigger: ATTACAGAGCCTAGAGGCTCACAGCCTCCTGGAGGA...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR GCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCACCATTGGTGTCTAGCTaGCTTCCAGGGGGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: FLWFREKAYGIFTLDELAPLVSS*LPGGRE
Trigger: TTCTCTTCCCCCTGGAAGGCAGCTAGACACCAATGG...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACAAGATGTCCCCATTCTaGTCTGAGGGTCTGCATGCC +
Preference number: 2 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHKMSPF*SEGLHA
Trigger: GGCATGCAGACCCTCAGACCAGAATGGGGACATCTT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACGATGCCAGTCGTAGTTaGTCTCCCACAGAGCTAAGC +
Preference number: 2 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHDASRS*SPTELS
Trigger: GCTTAGCTCTGTGGGAGACCAACTACGACTGGCATC...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGCTGACAAGGATCCATTaGTGTCTAGCTGCCTTCCAG +
Preference number: 2 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRLTRIH*CLAAFQ
Trigger: CTGGAAGGCAGCTAGACACCAATGGATCCTTGTCAG...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTAGGTGGGCACCCTTGTaGGCCGACATTACTCCTAAG +
Preference number: 2 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSRWAPL*ADITPK
Trigger: CTTAGGAGTAATGTCGGCCCACAAGGGTGCCCACCT...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTAAGATGTCCCCATTCTaGTCTGAGGGTCTGCATGCC +
Preference number: 2 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSKMSPF*SEGLHA
Trigger: GGCATGCAGACCCTCAGACCAGAATGGGGACATCTT...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACTCCTCTTGGTGGTATTaGAAACCAGTGAGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHSSWWY*KPVSRE
Trigger: CTCTCTGCTCACTGGTTTTCAATACCACCAAGAGGA...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR GCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCCGCTACCCCCAACACTaGTTTCCTTTACTATTTCCT +
Preference number: 2 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLRYPQH*FPLLFP
Trigger: AGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCG...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR GCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAGCCACTATTTTCCTCTaGTCAACTGGAAAGCTGCAC +
Preference number: 2 (lower is better)
Translates to: FLWFREKAYGIFTLDELAATIFL*STGKLH
Trigger: GTGCAGCTTTCCAGTTGAGCAGAGGAAAATAGTGGC...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGGTTGGCTGGTTTCCCTaGCAATTGTTAATTCCCCTT +
Preference number: 2 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRVGWFP*QLLIPL
Trigger: AAGGGGAATTAACAATTGCCAGGGAAACCAGCCAAC...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR CAA 90 bp CTTTCATTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTaGGATGAACTTGCATATCGTGAGAGTCCTCAGCTCCAATTTCGT +
Preference number: 2 (lower is better)
Translates to: LSFLWFREKAYGIFT*DELAYRESPQLQFR
Trigger: ACGAAATTGGAGCTGAGGACTCTCACGATATGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAATGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCTTTCCTCTGCTCAACTaGAAAGCTGCACATAAGTCA +
Preference number: 2 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLFPLLN*KAAHKS
Trigger: TGACTTATGTGCAGCTTTCCAGTTGAGCAGAGGAAA...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCATTTCTCAAAGCAGTCTaGTATAATATGCGGCAACTC +
Preference number: 2 (lower is better)
Translates to: FLWFREKAYGIFTLDELAFLKAV*YNMRQL
Trigger: GAGTTGCCGCATATTATATCAGACTGCTTTGAGAAA...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACCAACTCCTTATGTACTaGAGCGTATCCAATACATTC +
Preference number: 2 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHQLLMY*SVSNTF
Trigger: GAATGTATTGGATACGCTCCAGTACATAAGGAGTTG...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTGTGTCTAGGCACATCTaGACTGGCATTCATTTTGAT +
Preference number: 2 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSVSRHI*TGIHFD
Trigger: ATCAAAATGAATGCCAGTCCAGATGTGCCTAGACAC...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACATGGTATCTTCACGTTaGATGAACTTGCATATCGTG +
Preference number: 2 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHMVSSR*MNLHIV
Trigger: CACGATATGCAAGTTCATCCAACGTGAAGATACCAT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTTTCTCAAAGCAGTCTaGTATAATATGCGGCAACTC +
Preference number: 2 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSFLKAV*YNMRQL
Trigger: GAGTTGCCGCATATTATATCAGACTGCTTTGAGAAA...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACGACTGGCATTCATTTTaGTACCCAATCCATAGATTA +
Preference number: 2 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHDWHSF*YPIHRL
Trigger: TAATCTATGGATTGGGTATCAAAATGAATGCCAGTC...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR GCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCACAGTCTGATATAATATaGGGCAACTCCTTATGTACT +
Preference number: 2 (lower is better)
Translates to: FLWFREKAYGIFTLDELAQSDII*GNSLCT
Trigger: AGTACATAAGGAGTTGCCGCATATTATATCAGACTG...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR GCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAGCTAATAGAAACAACTaGAATAGACTAGGGATGAGA +
Preference number: 2 (lower is better)
Translates to: FLWFREKAYGIFTLDELAANRNN*NRLGMR
Trigger: TCTCATCCCTAGTCTATTGCAGTTGTTTCTATTAGC...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR TCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTGACTGGCATTCATTTTaGTACCCAATCCATAGATTA +
Preference number: 2 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSDWHSF*YPIHRL
Trigger: TAATCTATGGATTGGGTATCAAAATGAATGCCAGTC...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR CCA 72 bp ATTCCTGAGGCAGCAGACCACAAGATGTCCCCATTCTaGTCTGAGGGTCTGCATGCCGCTACCCCCAACACT +
Preference number: 3 (lower is better)
Translates to: IPEAADHKMSPF*SEGLHAATPNT
Trigger: AGTGTTGGGGGTAGCGGCATGCAGACCCTCAGACCAGAATGGGGACATCTTGTGGTCTGCTGCCTCAGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR GCA 72 bp CAGACCACAAGATGTCCCCATTCTGGTCTGAGGGTCTaGATGCCGCTACCCCCAACACTGCTTTCCTTTACT +
Preference number: 3 (lower is better)
Translates to: QTTRCPHSGLRV*MPLPPTLLSFT
Trigger: AGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGACCAGAATGGGGACATCTTGTGGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR GCA 72 bp GTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTaGTCAACTGGAAAGCTGCACATAAGTCACAGCAAG +
Preference number: 3 (lower is better)
Translates to: VLLGDSPATIFL*STGKLHISHSK
Trigger: CTTGCTGTGACTTATGTGCAGCTTTCCAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR TCA 72 bp AACTGTGGAGTGGGGCTGACTCAGCCTTCAGAACTGTaGAGTGGATGCCTTAACAGGGCCAAGATCTATCAG +
Preference number: 3 (lower is better)
Translates to: NCGVGLTQPSEL*SGCLNRAKIYQ
Trigger: CTGATAGATCTTGGCCCTGTTAAGGCATCCACTTCACAGTTCTGAAGGCTGAGTCAGCCCCACTCCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR CCA 72 bp GGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTaGAAAGCTGCACATAAGTCACAGCAAGTCAGTTTC +
Preference number: 3 (lower is better)
Translates to: GGQSCHYFPLLN*KAAHKSQQVSF
Trigger: GAAACTGACTTGCTGTGACTTATGTGCAGCTTTCCAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR GCA 72 bp TGTGAGCCTCTAGGCTCTGTAATGACAGTTCACCATTaGCTAAGGGAAGAAAAAGGACAGTTACAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: CEPLGSVMTVHH*LREEKGQLQAG
Trigger: CCCAGCCTGTAACTGTCCTTTTTCTTCCCTTAGGCAATGGTGAACTGTCATTACAGAGCCTAGAGGCTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR GCA 72 bp AATGTTACAACTGACAAGGATCCATTGGTGTCTAGCTaGCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGT +
Preference number: 3 (lower is better)
Translates to: NVTTDKDPLVSS*LPGGREDASRS
Trigger: ACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCTAGACACCAATGGATCCTTGTCAGTTGTAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CAA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTAAGAGGTGGGCACCCTaGTGGGCCGACATTACTCCT +
Preference number: 3 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSKRWAP*WADITP
Trigger: AGGAGTAATGTCGGCCCACAAGGGTGCCCACCTCTT...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR CCA 72 bp TCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTaGATGAACTTGCATATCGTGAGAGTCCTCAGCTCC +
Preference number: 3 (lower is better)
Translates to: SGSEKKLMVSSR*MNLHIVRVLSS
Trigger: GGAGCTGAGGACTCTCACGATATGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CAA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACACTGACAAGGATCCATaGGTGTCTAGCTGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHTDKDP*VSSCLP
Trigger: TGGAAGGCAGCTAGACACCAATGGATCCTTGTCAGT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CAA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTACTGACAAGGATCCATaGGTGTCTAGCTGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSTDKDP*VSSCLP
Trigger: TGGAAGGCAGCTAGACACCAATGGATCCTTGTCAGT...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CAA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCTATAATAAACTTGGGTaGGCTGGTTTCCCTGGCAAT +
Preference number: 3 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLYNKLG*AGFPGN
Trigger: ATTGCCAGGGAAACCAGCCAACCCAAGTTTATTATA...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CAA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACTATAATAAACTTGGGTaGGCTGGTTTCCCTGGCAAT +
Preference number: 3 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHYNKLG*AGFPGN
Trigger: ATTGCCAGGGAAACCAGCCAACCCAAGTTTATTATA...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CAA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCAGGATAGGCAAAACTTaGGAAGATTTATGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLRIGKT*EDLCPH
Trigger: GTGAGGACATAAATCTTCCAAAGTTTTGCCTATCCT...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR CCA 72 bp AACATAGTTCACAATCCTTCAATCCATACTCTTCAGTaGAGGATGAGGCCTTATTTAACAGTTAACTGGGAC +
Preference number: 3 (lower is better)
Translates to: NIVHNPSIHTLQ*RMRPYLTVNWD
Trigger: GTCCCAGTTAACTGTTAAATAAGGCCTCATCCTCCACTGAAGAGTATGGATTGAAGGATTGTGAACTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR CCA 72 bp ACAAAACAGTACCATACAGGCAAAATCTTACTTCAGTaGCAAAGCACACACATAGGTATACTCCAACGTGTA +
Preference number: 3 (lower is better)
Translates to: TKQYHTGKILLQ*QSTHIGILQRV
Trigger: TACACGTTGGAGTATACCTATGTGTGTGCTTTGCCACTGAAGTAAGATTTTGCCTGTATGGTACTGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CAA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGGTCAATATTTTCCTCTaGGTGGTATTGAAAACCAGT +
Preference number: 3 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRVNIFL*VVLKTS
Trigger: ACTGGTTTTCAATACCACCAAGAGGAAAATATTGAC...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CAA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCAGAAGTATTTTACAGTaGAAACCTTTGGAAAGGGCT +
Preference number: 3 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLRSILQ*KPLERA
Trigger: AGCCCTTTCCAAAGGTTTCAACTGTAAAATACTTCT...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CAA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAAATGATATAATAAACTaGGGTTGGCTGGTTTCCCTG +
Preference number: 3 (lower is better)
Translates to: FLWFREKAYGIFTLDELANDIIN*GWLVSL
Trigger: CAGGGAAACCAGCCAACCCAAGTTTATTATATCATT...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CAA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACAATGATATAATAAACTaGGGTTGGCTGGTTTCCCTG +
Preference number: 3 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHNDIIN*GWLVSL
Trigger: CAGGGAAACCAGCCAACCCAAGTTTATTATATCATT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CAA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACTATGGTATCTTCACGTaGGATGAACTTGCATATCGT +
Preference number: 3 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHYGIFT*DELAYR
Trigger: ACGATATGCAAGTTCATCCAACGTGAAGATACCATA...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR-3UTR CAA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAGTCAATATTTTCCTCTaGGTGGTATTGAAAACCAGT +
Preference number: 3 (lower is better)
Translates to: FLWFREKAYGIFTLDELAVNIFL*VVLKTS
Trigger: ACTGGTTTTCAATACCACCAAGAGGAAAATATTGAC...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGCTGGGGGCGGTGTTCTaGTTCCCGCAGCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLLGAVF*FPQPFS
Trigger: GGAGAAGGGCTGCGGGAAGCAGAACACCGCCCCCAG...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGGGCGAACCCTTTTGCTaGTACTCCGGGAGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEGEPFC*YSGSAQ
Trigger: CTGGGCGCTCCCGGAGTATCAGCAAAAGGGTTCGCC...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGTGGCTGACACGCTCCTaGGTCGTAGGCACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEWLTRS*VVGTGV
Trigger: CACTCCTGTGCCTACGACCCAGGAGCGTGTCAGCCA...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGGGGGAAAACAAGAGGTaGGCACCCTTGTGGGCCGAC +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLGENKR*APLWAD
Trigger: GTCGGCCCACAAGGGTGCCCACCTCTTGTTTTCCCC...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGTGCTCCACTGGGAACTaGCTAGCGGATCCGAGACGG +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLCSTGN*LADPRR
Trigger: CCGTCTCGGATCCGCTAGCCAGTTCCCAGTGGAGCA...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGCCCAGAAGGTGTGGGTaGTTTCTACCGCTGGAACGT +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLPRRCG*FLPLER
Trigger: ACGTTCCAGCGGTAGAAATCACCCACACCTTCTGGG...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGTCCTCCAGGAGGCTGTaGGCCTCTAGGCTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTESSRRL*ASRLCN
Trigger: ATTACAGAGCCTAGAGGCTCACAGCCTCCTGGAGGA...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGTTCTCCAGCCTCAACTaGCCCTTCCATGTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEFSSLN*PFHVAA
Trigger: AGCGGCTACATGGAAGGGGCAGTTGAGGCTGGAGAA...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGCAGAGAATATCCGAGTaGTGCCCCCGCACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEQRISE*CPRTAS
Trigger: TGAAGCAGTGCGGGGGCACCACTCGGATATTCTCTG...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGCAGAGAATATCCGAGTaGTGCCCCCGCACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLQRISE*CPRTAS
Trigger: TGAAGCAGTGCGGGGGCACCACTCGGATATTCTCTG...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGGGGGACGGCAAAGGGTaGGAAGGACCCTTCTATCAA +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLGDGKG*EGPFYQ
Trigger: TTGATAGAAGGGTCCTTCCCACCCTTTGCCGTCCCC...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGCATTTGTCAGCATGTTaGGCCTCCCAGGGTGCATCA +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEHLSAC*ASQGAS
Trigger: TGATGCACCCTGGGAGGCTCAACATGCTGACAAATG...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGATCCTGCCCACGGGTTaGCGAATCACCCTTCCATAT +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLILPTG*RITLPY
Trigger: ATATGGAAGGGTGATTCGTCAACCCGTGGGCAGGAT...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGTCTCTTCTCTTGGCCTaGAATGCCACCTCCGATCAC +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLSLLLA*NATSDH
Trigger: GTGATCGGAGGTGGCATTTCAGGCCAAGAGAAGAGA...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGTCGGGTTGTAAGCGCTaGAACCCCGGAGGCCACTCT +
Preference number: 4 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLSGCKR*NPGGHS
Trigger: AGAGTGGCCTCCGGGGTTTCAGCGCTTACAACCCGA...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACCGGAGTGTCAGGCACTaGGGTGGGGGTAGACGCCTG +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDRSVRH*GGGRRL
Trigger: CAGGCGTCTACCCCCACCTCAGTGCCTGACACTCCG...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR GCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGAGAATATCCGAGTGGTaGCCCCGCACTGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLRISEW*PRTASH
Trigger: ATGTGAAGCAGTGCGGGGGCACCACTCGGATATTCT...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGCCATTGGTGTCTAGCTaGCTTCCAGGGGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEPLVSS*LPGGRE
Trigger: TTCTCTTCCCCCTGGAAGGCAGCTAGACACCAATGG...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGCGCTGGAACGTCCTTTaGTTCAGGTTCTTGTACCCA +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTERWNVL*FRFLYP
Trigger: TGGGTACAAGAACCTGAATCAAAGGACGTTCCAGCG...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGCCGCAAAGAAAATCCTaGCCACGGGTTGACGAATCA +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLPQRKS*PRVDES
Trigger: TGATTCGTCAACCCGTGGGCAGGATTTTCTTTGCGG...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGACAAACTTCCGTTCCTaGCCACCATTGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLTNFRS*PPLVTE
Trigger: CTCTGTCACCAATGGTGGCCAGGAACGGAAGTTTGT...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGACAAACTTCCGTTCCTaGCCACCATTGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTETNFRS*PPLVTE
Trigger: CTCTGTCACCAATGGTGGCCAGGAACGGAAGTTTGT...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGCCCGGAGGCCACTCTTaGAGTCGGAGTCAGTACTCT +
Preference number: 4 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLPGGHS*SRSQYS
Trigger: AGAGTACTGACTCCGACTCCAAGAGTGGCCTCCGGG...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGCCTGGCCACCATTGGTaGCAGAGAATATCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLPGHHW*QRISEW
Trigger: CCACTCGGATATTCTCTGTCACCAATGGTGGCCAGG...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGGATGATGTTGTCACTTaGCTGGTCAACGTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEDDVVT*LVNVSD
Trigger: GTCACTCACGTTGACCAGTCAAGTGACAACATCATC...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGCCCATTGGAAGCCGCTaGATTAACTGGTTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEPIGSR*INWFLS
Trigger: AGAGAGAAACCAGTTAATTCAGCGGCTTCCAATGGG...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACGTCCCCATTCTGGTCTaGGGGTCTGCATGCCGCTAC +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDVPILV*GSACRY
Trigger: GTAGCGGCATGCAGACCCTCAGACCAGAATGGGGAC...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGACTGTGGAGTGGGGCTaGCTCAGCCTTCAGAACTGT +
Preference number: 4 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLTVEWG*LSLQNC
Trigger: ACAGTTCTGAAGGCTGAGTCAGCCCCACTCCACAGT...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACGGGTACTGGTGCCGGTaGCGGTGCCGCCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHGYWCR*RCRRGR
Trigger: CCTTCCCCGGCGGCACCGGCACCGGCACCAGTACCC...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR GCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAGGACCTGGGCAGTTGTaGCCCCGGCTTCGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: FLWFREKAYGIFTLDELAGPGQL*PRLRAG
Trigger: GCCCGCCCGAAGCCGGGGGCACAACTGCCCAGGTCC...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACTGGCTGACACGCTCCTaGGTCGTAGGCACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDWLTRS*VVGTGV
Trigger: CACTCCTGTGCCTACGACCCAGGAGCGTGTCAGCCA...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGGGGATTCCATACTGGTaGAAAGGCGCCCCGAAATGG +
Preference number: 4 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLGIPYW*KGAPKW
Trigger: CCATTTCGGGGCGCCTTTCCACCAGTATGGAATCCC...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACGGGGAAAACAAGAGGTaGGCACCCTTGTGGGCCGAC +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDGENKR*APLWAD
Trigger: GTCGGCCCACAAGGGTGCCCACCTCTTGTTTTCCCC...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGTTTGCTGGTACTGGCTaGAACTGGCAAAGCAACAGT +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEFAGTG*NWQSNS
Trigger: ACTGTTGCTTTGCCAGTTCCAGCCAGTACCAGCAAA...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACACACTGAGGTCAGGTTaGAATCCGGGGGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDTLRSG*NPGAGS
Trigger: CGACCCTGCCCCCGGATTCCAACCTGACCTCAGTGT...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGGCTGGAAAGGATTACTaGGTGCAGGAGGTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLAGKDY*VQEVLV
Trigger: TACAAGAACCTCCTGCACCCAGTAATCCTTTCCAGC...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGCATTTGTCAGCATGTTaGGCCTCCCAGGGTGCATCA +
Preference number: 4 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLHLSAC*ASQGAS
Trigger: TGATGCACCCTGGGAGGCTCAACATGCTGACAAATG...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACCATGATGGCAGGCAGTaGCCCATCTGGCTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDHDGRQ*PIWLGV
Trigger: GACACCAAGCCAGATGGGTCACTGCCTGCCATCATG...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGTGGTCAGGAGATTCCTaGGGCAGCAGACCACAAGAT +
Preference number: 4 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLWSGDS*GSRPQD
Trigger: ATCTTGTGGTCTGCTGCCTCAGGAATCTCCTGACCA...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCGGCGGCCTCGGCAGTTaGGGACGTGCTCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLGGLGS*GRAPLG
Trigger: TCCCAGTGGAGCACGTCCTCAACTGCCGAGGCCGCC...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGAGGAGGTGCTTGTATTaGCACTTGCGAAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTERRCLY*HLRKVI
Trigger: AATGACCTTTCGCAAGTGTCAATACAAGCACCTCCT...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTGGGGGAGCTGGGCACTaGGAGCGGGGCGGACCCTTG +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSGGAGH*ERGGPL
Trigger: CAAGGGTCCGCCCCGCTCTCAGTGCCCAGCTCCCCC...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR GCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGCAAAGCAACAGTTCATaGCAATCTCTTCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEQSNSS*QSLLLA
Trigger: GGCCAAGAGAAGAGATTGGCATGAACTGTTGCTTTG...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR GCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACGGGGATGTTATGGGGTaGAGGAGGTGCTTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDGDVMG*RRCLWR
Trigger: TCGCCACAAGCACCTCCTGCACCCCATAACATCCCC...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGGTTGGCTGGTTTCCCTaGCAATTGTTAATTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEVGWFP*QLLIPL
Trigger: AAGGGGAATTAACAATTGCCAGGGAAACCAGCCAAC...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGGCCAATCTCTTCTCTTaGCCTGAAATGCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLANLFS*PEMPPP
Trigger: CGGAGGTGGCATTTCAGGCCAAGAGAAGAGATTGGC...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGTGTTTTTGCTGGTACTaGCTGGAACTGGCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLCFCWY*LELAKQ
Trigger: TTGCTTTGCCAGTTCCAGCCAGTACCAGCAAAAACA...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCGAGCACGCTGGGCGCTaGGGGCGGTGTTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLEHAGR*GRCSAS
Trigger: GGAAGCAGAACACCGCCCCCAGCGCCCAGCGTGCTC...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCGGGAGCCGGGCACTGTaGGCGGGGCGAACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLGSRAL*AGRTLL
Trigger: CAAAAGGGTTCGCCCCGCCCACAGTGCCCGGCTCCC...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGGATATGTTTTCCCCTTaGCATATTGAACGAGACGCT +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEDMFSP*HIERDA
Trigger: AGCGTCTCGTTCAATATGTCAAGGGGAAAACATATC...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGATGTGGAAAATCCAATaGTCTTCAGCAGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLMWKIQ*SSAGQK
Trigger: TTTCTGGCCTGCTGAAGATCATTGGATTTTCCACAT...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGGGTATTGAAAACCAGTaGGCAGAGAGCATAAGAACA +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLGIENQ*AESIRT
Trigger: TGTTCTTATGCTCTCTGCTCACTGGTTTTCAATACC...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACGGCAGACCCTTGCAATaGCTCTACGGGGGAGTTTAC +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDGRPLQ*LYGGVY
Trigger: GTAAACTCCCCCGTAGAGTCATTGCAAGGGTCTGCC...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR GCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACTTCTCCAGCCTCAACTaGCCCTTCCATGTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDFSSLN*PFHVAA
Trigger: AGCGGCTACATGGAAGGGGCAGTTGAGGCTGGAGAA...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGCTTTCCCAGAAGGTGTaGGTGATTTCTACCGCTGGA +
Preference number: 4 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLLSQKV*VISTAG
Trigger: TCCAGCGGTAGAAATCACCCACACCTTCTGGGAAAG...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGAGAACTTCAAGACCGTaGCAGGAGCTTGTATTTGTA +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLRTSRP*QELVFV
Trigger: TACAAATACAAGCTCCTGCCACGGTCTTGAAGTTCT...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGTTTCCTCTGCTCAACTaGAAAGCTGCACATAAGTCA +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLFPLLN*KAAHKS
Trigger: TGACTTATGTGCAGCTTTCCAGTTGAGCAGAGGAAA...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCGTTTCTGGAGCACGCTaGGCGCTGGGGGCGGTGTTC +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLVSGAR*ALGAVF
Trigger: GAACACCGCCCCCAGCGCCCAGCGTGCTCCAGAAAC...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCATACTGGTGCGGGTACTaGTGCCGGTGCCGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: FLWFREKAYGIFTLDELAYWCGY*CRCRCR
Trigger: GCGGCACCGGCACCGGCACCAGTACCCGCACCAGTA...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACTGCCGGTGCCGGTACTaGTGCGGGTACTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHCRCRY*CGYWCR
Trigger: CCGGCACCAGTACCCGCACCAGTACCGGCACCGGCA...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACTCCGGGTTCGGGACCTaGGCAGTTGTGCCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHSGFGT*AVVPPA
Trigger: AGCCGGGGGCACAACTGCCCAGGTCCCGAACCCGGA...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGGTCATCCAAGGTTATTaGAATTGGAGCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLVIQGY*NWSIFI
Trigger: GATGAAGATGCTCCAATTTCAATAACCTTGGATGAC...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACATCCTGCCCACGGGTTaGCGAATCACCCTTCCATAT +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDILPTG*RITLPY
Trigger: ATATGGAAGGGTGATTCGTCAACCCGTGGGCAGGAT...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACTGGTCAGGAGATTCCTaGGGCAGCAGACCACAAGAT +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDWSGDS*GSRPQD
Trigger: ATCTTGTGGTCTGCTGCCTCAGGAATCTCCTGACCA...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGTTTCTCAAAGCAGTCTaGTATAATATGCGGCAACTC +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEFLKAV*YNMRQL
Trigger: GAGTTGCCGCATATTATATCAGACTGCTTTGAGAAA...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGATCAGCCTCTTAAACTaGCTTTCATTTCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLISLLN*LSFLWF
Trigger: GAACCAGAGAAATGAAAGTCAGTTTAAGAGGCTGAT...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGCCTGATTGGAGGCTGTaGCGGCCCCATCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRPDWRL*RPHRRS
Trigger: ACTCCTCCGATGGGGCCGTCACAGCCTCCAATCAGG...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCGGAATGCCGGTGTCCTaGTTGGAGGCTGTGACGGCC +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLGMPVS*LEAVTA
Trigger: GGCCGTCACAGCCTCCAATCAGGACACCGGCATTCC...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR GCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACAGAATATCCGAGTGGTaGCCCCGCACTGCTTCACAT +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDRISEW*PRTASH
Trigger: ATGTGAAGCAGTGCGGGGGCACCACTCGGATATTCT...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACCCATTGGTGTCTAGCTaGCTTCCAGGGGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDPLVSS*LPGGRE
Trigger: TTCTCTTCCCCCTGGAAGGCAGCTAGACACCAATGG...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACAAGATGTCCCCATTCTaGTCTGAGGGTCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDKMSPF*SEGLHA
Trigger: GGCATGCAGACCCTCAGACCAGAATGGGGACATCTT...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGCAACTCCTTATGTACTaGAGCGTATCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEQLLMY*SVSNTF
Trigger: GAATGTATTGGATACGCTCCAGTACATAAGGAGTTG...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGATCCATACTCTTCAGTaGAGGATGAGGCCTTATTTA +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEIHTLQ*RMRPYL
Trigger: TAAATAAGGCCTCATCCTCCACTGAAGAGTATGGAT...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACCCTTGTGTCGGCAGCTaGAAAGGATTACTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDPCVGS*KGLLGA
Trigger: TGCACCCAGTAATCCTTTCCAGCTGCCGACACAAGG...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGGAACGAGACGCTCACTaGCATTCACTTTGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLERDAH*HSLCKS
Trigger: AGACTTACAAAGTGAATGTCAGTGAGCGTCTCGTTC...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGAGCAGATTTTGTCAATaGGCTCTTTCATGGTCATTT +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLSRFCQ*ALSWSF
Trigger: AAATGACCATGAAAGAGCTCATTGACAAAATCTGCT...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACATCCGTTCGCTCACTTaGCCAGATCCACCTACAAAC +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDIRSLT*PDPPTN
Trigger: GTTTGTAGGTGGATCTGGTCAAGTGAGCGAACGGAT...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGGACTGGCATTCATTTTaGTACCCAATCCATAGATTA +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLDWHSF*YPIHRL
Trigger: TAATCTATGGATTGGGTATCAAAATGAATGCCAGTC...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGGCCGGGGAAGGAGGCTaGGGCGTTTGTGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRAGEGG*GVCAHV
Trigger: AACATGAGCACAAACGCCTCAGCCTCCTTCCCCGGC...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACGGGGAAGCTGGACACTaGGGATGCGGCAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHGEAGH*GCGRPL
Trigger: CAAGGGTCTGCCGCATCCTCAGTGTCCAGCTTCCCC...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR GCA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGCAGTCTGATATAATATaGGGCAACTCCTTATGTACT +
Preference number: 4 (lower is better)
Translates to: SCLPGGREDASRSWSPTEQSDII*GNSLCT
Trigger: AGTACATAAGGAGTTGCCGCATATTATATCAGACTG...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGGCTAATAGAAACAACTaGAATAGACTAGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLANRNN*NRLGMR
Trigger: TCTCATCCCTAGTCTATTGCAGTTGTTTCTATTAGC...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACTCTCTTGGCCTGAAATaGCACCTCCGATCACGACTA +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDSLGLK*HLRSRL
Trigger: TAGTCGTGATCGGAGGTGGCATTTCAGGCCAAGAGA...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACAATGGGATTCCATACTaGTGGAAAGGCGCCCCGAAA +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDNGIPY*WKGAPK
Trigger: TTTCGGGGCGCCTTTCCACCAGTATGGAATCCCATT...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACCCAGGGTGCATCAGTTaGAATCTCCTTCCCCATGTT +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDPGCIS*NLLPHV
Trigger: AACATGGGGAAGGAGATTCCAACTGATGCACCCTGG...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGAAAATCTTACTTCAGTaGCAAAGCACACACATAGGT +
Preference number: 4 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLKILLQ*QSTHIG
Trigger: ACCTATGTGTGTGCTTTGCCACTGAAGTAAGATTTT...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGCATGTATGTTTTTGCTaGTACTGGCTGGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLHVCFC*YWLELA
Trigger: TGCCAGTTCCAGCCAGTACCAGCAAAAACATACATG...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGAGGTGTCGTCCAAGCTaGAGTCCGGGTTCGGGACCT +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRRCRPS*SPGSGP
Trigger: AGGTCCCGAACCCGGACTCCAGCTTGGACGACACCT...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACTTCCCCTTGACATATTaGACGAGACGCTCACTGACA +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDFPLTY*TRRSLT
Trigger: TGTCAGTGAGCGTCTCGTTCAATATGTCAAGGGGAA...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACTCCTCTTGGTGGTATTaGAAACCAGTGAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDSSWWY*KPVSRE
Trigger: CTCTCTGCTCACTGGTTTTCAATACCACCAAGAGGA...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGGGCAGACCCTTGTACTaGCACTCGGGGGTGTTACTG +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRGRPLY*HSGVLL
Trigger: CAGTAACACCCCCGAGTGTCAGTACAAGGGTCTGCC...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR GCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAATGGGGTGCAGGAGGTaGTTGTGGCGACACTGGGGA +
Preference number: 4 (lower is better)
Translates to: FLWFREKAYGIFTLDELAMGCRR*LWRHWG
Trigger: TCCCCAGTGTCGCCACAAGCACCTCCTGCACCCCAT...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACGTGACCCATCTGGCTTaGTGTCATCCAAGGTTATTG +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDVTHLA*CHPRLL
Trigger: CAATAACCTTGGATGACACCAAGCCAGATGGGTCAC...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGAGCCGCTCCACTTTGTaGCAGTCTCTGTGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRSRSTL*QSLCPQ
Trigger: TTGCGGGCACAGAGACTGCCACAAAGTGGAGCGGCT...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACAACCCCAGGGGAAGCTaGACACTGAGGATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHNPRGS*TLRMRQ
Trigger: CTGCCGCATCCTCAGTGTCCAGCTTCCCCTGGGGTT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCCCTGGCCACCATTGGTaGCAGAGAATATCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLPGHHW*QRISEW
Trigger: CCACTCGGATATTCTCTGTCACCAATGGTGGCCAGG...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACCATGATGGCAGGCAGTaGCCCATCTGGCTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHHDGRQ*PIWLGV
Trigger: GACACCAAGCCAGATGGGTCACTGCCTGCCATCATG...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGTCCTCCAGGAGGCTGTaGGCCTCTAGGCTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRSSRRL*ASRLCN
Trigger: ATTACAGAGCCTAGAGGCTCACAGCCTCCTGGAGGA...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTGTCCCCATTCTGGTCTaGGGGTCTGCATGCCGCTAC +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSVPILV*GSACRY
Trigger: GTAGCGGCATGCAGACCCTCAGACCAGAATGGGGAC...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGACTGTGGAGTGGGGCTaGCTCAGCCTTCAGAACTGT +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRTVEWG*LSLQNC
Trigger: ACAGTTCTGAAGGCTGAGTCAGCCCCACTCCACAGT...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCAGGAGGTTCTTGTATTaGACCCCGCGGAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLRRFLY*TPRSVR
Trigger: CCTGACACTCCGCGGGGTTCAATACAAGAACCTCCT...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR GCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACTCTGGTCTGAGGGTCTaGATGCCGCTACCCCCAACA +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHSGLRV*MPLPPT
Trigger: TGTTGGGGGTAGCGGCATGCAGACCCTCAGACCAGA...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCGAGAAGGCAGACCCTTaGAATGACTCTACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLEKADP*NDSTGE
Trigger: CTCCCCCGTAGAGTCATTGCAAGGGTCTGCCTTCTC...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGACTACGTCGAACATGTaGCCCGCGATACTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRTTSNM*PAILAF
Trigger: GAAGGCGAGTATCGCGGGCCACATGTTCGACGTAGT...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCAGGACAGTTACAGGCTaGGCCTTCACCTACTCCACC +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLRTVTG*AFTYST
Trigger: GGTGGAGTAGGTGAAGGCCCAGCCTGTAACTGTCCT...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGAGGTGGGCACCCTTGTaGGCCGACATTACTCCTAAG +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRRWAPL*ADITPK
Trigger: CTTAGGAGTAATGTCGGCCCACAAGGGTGCCCACCT...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGATCCATACTCTTCAGTaGAGGATGAGGCCTTATTTA +
Preference number: 4 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLIHTLQ*RMRPYL
Trigger: TAAATAAGGCCTCATCCTCCACTGAAGAGTATGGAT...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACTTGTGCTCATGTTTCTaGAGCACGCTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHLCSCF*STLGAG
Trigger: CCCAGCGCCCAGCGTGCTCCAGAAACATGAGCACAA...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTGAGGACGTGCTCCACTaGGAACTGGCTAGCGGATCC +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSEDVLH*ELASGS
Trigger: GGATCCGCTAGCCAGTTCCCAGTGGAGCACGTCCTC...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTTGGGGAGTGTATGCTaGAGCTCCAGGAGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSLGSVC*SSRRRP
Trigger: AGGCCGCCTCCTGGAGCTCCAGCATACACTCCCCAA...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR GCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGAGGCTGAGGCGTTTGTaGTCATGTTTCTGGAGCACG +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRRLRRL*SCFWST
Trigger: CGTGCTCCAGAAACATGAGCACAAACGCCTCAGCCT...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR GCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTCGGCAGTTGAGGACGTaGTCCACTGGGAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSRQLRT*STGNWL
Trigger: TAGCCAGTTCCCAGTGGAGCACGTCCTCAACTGCCG...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAACTACGTCGAACATGTaGCCCGCGATACTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: FLWFREKAYGIFTLDELATTSNM*PAILAF
Trigger: GAAGGCGAGTATCGCGGGCCACATGTTCGACGTAGT...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAGGGATTCCATACTGGTaGAAAGGCGCCCCGAAATGG +
Preference number: 4 (lower is better)
Translates to: FLWFREKAYGIFTLDELAGIPYW*KGAPKW
Trigger: CCATTTCGGGGCGCCTTTCCACCAGTATGGAATCCC...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACTTTCCTCTGCTCAACTaGAAAGCTGCACATAAGTCA +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDFPLLN*KAAHKS
Trigger: TGACTTATGTGCAGCTTTCCAGTTGAGCAGAGGAAA...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCGATGCCAGTCGTAGTTaGTCTCCCACAGAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLDASRS*SPTELS
Trigger: GCTTAGCTCTGTGGGAGACCAACTACGACTGGCATC...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACAGGTGGGCACCCTTGTaGGCCGACATTACTCCTAAG +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHRWAPL*ADITPK
Trigger: CTTAGGAGTAATGTCGGCCCACAAGGGTGCCCACCT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCACTGGTCAACGTGAGTaGCAGGATGGTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLTGQRE*QDGSAS
Trigger: TGAAGCTGAACCATCCTGTCACTCACGTTGACCAGT...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACCTTGACTGGTCAACGTaGGTGACAGGATGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHLDWST*VTGWFS
Trigger: GCTGAACCATCCTGTCACTCACGTTGACCAGTCAAG...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCAGCTCTGGTCTGAAGTaGATCTTGGCAGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLSSGLK*ILAVKV
Trigger: GACCTTGACTGCCAAGATTCACTTCAGACCAGAGCT...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACCATCTTCATCTTCAATaGTCATGCAGCCACAGTAAT +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDHLHLQ*SCSHSN
Trigger: ATTACTGTGGCTGCATGATCATTGAAGATGAAGATG...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGCGCTGGAACGTCCTTTaGTTCAGGTTCTTGTACCCA +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRRWNVL*FRFLYP
Trigger: TGGGTACAAGAACCTGAATCAAAGGACGTTCCAGCG...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTCCCAGAAGGTGTGGGTaGTTTCTACCGCTGGAACGT +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSPRRCG*FLPLER
Trigger: ACGTTCCAGCGGTAGAAATCACCCACACCTTCTGGG...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACATCAGCCTCTTAAACTaGCTTTCATTTCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDISLLN*LSFLWF
Trigger: GAACCAGAGAAATGAAAGTCAGTTTAAGAGGCTGAT...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTAGTGTAGTCGGACACTaGGGTCAGGTTGGAATCCGG +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSSVVGH*GQVGIR
Trigger: CCGGATTCCAACCTGACCTCAGTGTCCGACTACACT...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTGGCGGACCCTTGTACTaGCACTCGGCGAGAGTTATT +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSGGPLY*HSARVI
Trigger: AATAACTCTCGCCGAGTGTCAGTACAAGGGTCCGCC...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR GCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCTTGAGCCTCCCAGGGTaGATCAGTTGGAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLLSLPG*ISWNLL
Trigger: AAGGAGATTCCAACTGATGCACCCTGGGAGGCTCAA...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGTTGAGCCTCCCAGGGTaGATCAGTTGGAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRLSLPG*ISWNLL
Trigger: AAGGAGATTCCAACTGATGCACCCTGGGAGGCTCAA...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCCCGCAAAGAAAATCCTaGCCACGGGTTGACGAATCA +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLPQRKS*PRVDES
Trigger: TGATTCGTCAACCCGTGGGCAGGATTTTCTTTGCGG...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTCCTGGGGGACAGTCCTaGCACTATTTTCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSPGGQS*HYFPLL
Trigger: GAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGG...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCACTCTCCACCAGGAGCTaGTTTCCTCTGATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FLWFREKAYGIFTLDELALSTRS*FPLMLQ
Trigger: TTGGAGCATCAGAGGAAAGCAGCTCCTGGTGGAGAG...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACATTCAGTCAAGAGTTTaGCAGCAGATAGTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDIQSRV*QQIVLK
Trigger: TTTCAGGACTATCTGCTGCCAAACTCTTGACTGAAT...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338702.4
CDS-3UTR CCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCAATGGGATTCCATACTaGTGGAAAGGCGCCCCGAAA +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLNGIPY*WKGAPK
Trigger: TTTCGGGGCGCCTTTCCACCAGTATGGAATCCCATT...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCCTTTCCCAGAAGGTGTaGGTGATTTCTACCGCTGGA +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLLSQKV*VISTAG
Trigger: TCCAGCGGTAGAAATCACCCACACCTTCTGGGAAAG...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACTTAAAATCTAATTCTTaGCCTAACTGTGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDLKSNS*PNCGVG
Trigger: CCCCACTCCACAGTTAGGCCAAGAATTAGATTTTAA...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
3UTR CAA 72 bp CTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTaGGATGAACTTGCATATCGTGAGAGTCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LWFREKAYGIFT*DELAYRESPQL
Trigger: GAGCTGAGGACTCTCACGATATGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACATCCGTTCGCTCACTTaGCCAGATCCACCTACAAAC +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHIRSLT*PDPPTN
Trigger: GTTTGTAGGTGGATCTGGTCAAGTGAGCGAACGGAT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACAGCTCTGGTCTGAAGTaGATCTTGGCAGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHSSGLK*ILAVKV
Trigger: GACCTTGACTGCCAAGATTCACTTCAGACCAGAGCT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCCCCCAGGGCAGTTACTaGTGTGGAAAATCCAATGAT +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLPQGSY*CGKSND
Trigger: ATCATTGGATTTTCCACATCAGTAACTGCCCTGGGG...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGCAGATAGTCCTGAAATaGCACCTCCGATCACGACTA +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRQIVLK*HLRSRL
Trigger: TAGTCGTGATCGGAGGTGGCATTTCAGGACTATCTG...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338702.4
CDS-3UTR GCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGGCCACTATTTTCCTCTaGTCAACTGGAAAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRATIFL*STGKLH
Trigger: GTGCAGCTTTCCAGTTGAGCAGAGGAAAATAGTGGC...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACCAGTCTGATATAATATaGGGCAACTCCTTATGTACT +
Preference number: 4 (lower is better)
Translates to: QSTHIGILQRVALGQTSDQSDII*GNSLCT
Trigger: AGTACATAAGGAGTTGCCGCATATTATATCAGACTG...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGGATTCTGTTTTGGGTTaGTCCCACATAAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRDSVLG*SHISST
Trigger: GGTGGAGCTTATGTGGGACCAACCCAAAACAGAATC...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACCCAGGGTGCATCAGTTaGAATCTCCTTCCCCATGTT +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHPGCIS*NLLPHV
Trigger: AACATGGGGAAGGAGATTCCAACTGATGCACCCTGG...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCCTGGGGAAATGTTATTaGGTAGAGGTGGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLLGKCY*VEVVLV
Trigger: TACCAGGACCACCTCTACCCAATAACATTTCCCCAG...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542639.5
3UTR CAA 72 bp GAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTaGCATATCGTGAGAGTCCTCAGCTCCAATTTCGTG +
Preference number: 4 (lower is better)
Translates to: EKKLMVSSRWMN*HIVRVLSSNFV
Trigger: CACGAAATTGGAGCTGAGGACTCTCACGATATGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCATTCCCCTTGACATATTaGACGAGACGCTCACTGACA +
Preference number: 4 (lower is better)
Translates to: FLWFREKAYGIFTLDELAFPLTY*TRRSLT
Trigger: TGTCAGTGAGCGTCTCGTTCAATATGTCAAGGGGAA...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACGATGATGTTGTCACTTaGCTGGTCAACGTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHDDVVT*LVNVSD
Trigger: GTCACTCACGTTGACCAGTCAAGTGACAACATCATC...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCACCCATTGGAAGCCGCTaGATTAACTGGTTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FLWFREKAYGIFTLDELAPIGSR*INWFLS
Trigger: AGAGAGAAACCAGTTAATTCAGCGGCTTCCAATGGG...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACCCCCAGGGCAGTTACTaGTGTGGAAAATCCAATGAT +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHPQGSY*CGKSND
Trigger: ATCATTGGATTTTCCACATCAGTAACTGCCCTGGGG...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACGGAGCTGCTTTCCTCTaGTGCTCCAACATACATGTA +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHGAAFL*CSNIHV
Trigger: TACATGTATGTTGGAGCATCAGAGGAAAGCAGCTCC...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACGATTCTGTTTTGGGTTaGTCCCACATAAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHDSVLG*SHISST
Trigger: GGTGGAGCTTATGTGGGACCAACCCAAAACAGAATC...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAGTGACCCATCTGGCTTaGTGTCATCCAAGGTTATTG +
Preference number: 4 (lower is better)
Translates to: FLWFREKAYGIFTLDELAVTHLA*CHPRLL
Trigger: CAATAACCTTGGATGACACCAAGCCAGATGGGTCAC...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACGGGATCCCAGCACTTTaGCATAGAGCTCACAGATTT +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHGIPAL*HRAHRF
Trigger: AAATCTGTGAGCTCTATGCCAAAGTGCTGGGATCCC...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACCGCTACCCCCAACACTaGTTTCCTTTACTATTTCCT +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHRYPQH*FPLLFP
Trigger: AGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCG...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTGCCACTATTTTCCTCTaGTCAACTGGAAAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSATIFL*STGKLH
Trigger: GTGCAGCTTTCCAGTTGAGCAGAGGAAAATAGTGGC...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTGGGATCCCAGCACTTTaGCATAGAGCTCACAGATTT +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSGIPAL*HRAHRF
Trigger: AAATCTGTGAGCTCTATGCCAAAGTGCTGGGATCCC...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCGTGTCTAGGCACATCTaGACTGGCATTCATTTTGAT +
Preference number: 4 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLVSRHI*TGIHFD
Trigger: ATCAAAATGAATGCCAGTCCAGATGTGCCTAGACAC...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGATTCAGTCAAGAGTTTaGCAGCAGATAGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRIQSRV*QQIVSP
Trigger: TGGAGAGACTATCTGCTGCCAAACTCTTGACTGAAT...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR TCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTGAACGAGACGCTCACTaGCATTCACTTTGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSERDAH*HSLCKS
Trigger: AGACTTACAAAGTGAATGTCAGTGAGCGTCTCGTTC...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACATGTGGAAAATCCAATaGTCTTCAGCAGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHMWKIQ*SSAGQK
Trigger: TTTCTGGCCTGCTGAAGATCATTGGATTTTCCACAT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGTTTCTCAAAGCAGTCTaGTATAATATGCGGCAACTC +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRFLKAV*YNMRQL
Trigger: GAGTTGCCGCATATTATATCAGACTGCTTTGAGAAA...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGCAACTCCTTATGTACTaGAGCGTATCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRQLLMY*SVSNTF
Trigger: GAATGTATTGGATACGCTCCAGTACATAAGGAGTTG...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACGTGTCTAGGCACATCTaGACTGGCATTCATTTTGAT +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHVSRHI*TGIHFD
Trigger: ATCAAAATGAATGCCAGTCCAGATGTGCCTAGACAC...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGATGGTATCTTCACGTTaGATGAACTTGCATATCGTG +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRMVSSR*MNLHIV
Trigger: CACGATATGCAAGTTCATCCAACGTGAAGATACCAT...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAGGCAAACTTCAGACATaGAACATTAGGCACCAAGTT +
Preference number: 4 (lower is better)
Translates to: FLWFREKAYGIFTLDELAGKLQT*NIRHQV
Trigger: AACTTGGTGCCTAATGTTCCATGTCTGAAGTTTGCC...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGAGCAGATTTTGTCAATaGGCTCTTTCATGGTCATTT +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRSRFCQ*ALSWSF
Trigger: AAATGACCATGAAAGAGCTCATTGACAAAATCTGCT...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACCATCTTCATCTTCAATaGTCATGCAGCCACAGTAAT +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHHLHLQ*SCSHSN
Trigger: ATTACTGTGGCTGCATGATCATTGAAGATGAAGATG...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACGTCATCCAAGGTTATTaGAATTGGAGCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHVIQGY*NWSIFI
Trigger: GATGAAGATGCTCCAATTTCAATAACCTTGGATGAC...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR TCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGGACTGGCATTCATTTTaGTACCCAATCCATAGATTA +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRDWHSF*YPIHRL
Trigger: TAATCTATGGATTGGGTATCAAAATGAATGCCAGTC...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGGCTAATAGAAACAACTaGAATAGACTAGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRANRNN*NRLGMR
Trigger: TCTCATCCCTAGTCTATTGCAGTTGTTTCTATTAGC...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAATACATGTATGTTTTTaGTGGTACTGGCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: FLWFREKAYGIFTLDELAIHVCF*WYWLEL
Trigger: CAGTTCCAGCCAGTACCAGCAAAAACATACATGTAT...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGAAAATCTTACTTCAGTaGCAAAGCACACACATAGGT +
Preference number: 4 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRKILLQ*QSTHIG
Trigger: ACCTATGTGTGTGCTTTGCCACTGAAGTAAGATTTT...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR GCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTCATTGGGGGTGGCAGTaGACTTTATTAACAAACAAA +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSHWGWQ*TLLTNK
Trigger: TTTGTTTGTTAATAAAGTGCACTGCCACCCCCAATG...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CCA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACAATCCAAATATGCAATaGGATTCCATACTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHNPNMQ*DSILVE
Trigger: TTCCACCAGTATGGAATCCCATTGCATATTTGGATT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTTAAAATCTAATTCTTaGCCTAACTGTGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSLKSNS*PNCGVG
Trigger: CCCCACTCCACAGTTAGGCCAAGAATTAGATTTTAA...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CCA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTAATCCAAATATGCAATaGGATTCCATACTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSNPNMQ*DSILVE
Trigger: TTCCACCAGTATGGAATCCCATTGCATATTTGGATT...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS GCA 90 bp CGGGCGGGCCCTCCGCCTTGCGCTCGGTGCCGGTGCCGGTACTGGTaGGGGTACTGGTGCCGGTGCCGGTACTGGTGCGGGTACTGGTGC +
Preference number: 5 (lower is better)
Translates to: RAGPPPCARCRCRYW*GYWCRCRYWCGYWC
Trigger: GCACCAGTACCCGCACCAGTACCGGCACCGGCACCAGTACCCGCACCAGTACCGGCACCGGCACCGAGCGCAAGGCGGAGGGCCCGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS GCA 90 bp AGGTGTCGTCCAAGCTGGAGTCCGGGTTCGGGACCTGGGCAGTTGTaGCCCCGGCTTCGGGCGGGCCCTCCGCCTTGCGCTCGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: RCRPSWSPGSGPGQL*PRLRAGPPPCARCR
Trigger: CCGGCACCGAGCGCAAGGCGGAGGGCCCGCCCGAAGCCGGGGGCACAACTGCCCAGGTCCCGAACCCGGACTCCAGCTTGGACGACACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 90 bp CCTCCGCCTTGCGCTCGGTGCCGGTGCCGGTACTGGTGCGGGTACTaGTGCCGGTGCCGGTACTGGTGCGGGTACTGGTGCCGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: PPPCARCRCRYWCGY*CRCRYWCGYWCRCR
Trigger: CCGGCACCGGCACCAGTACCCGCACCAGTACCGGCACCGGCACCAGTACCCGCACCAGTACCGGCACCGGCACCGAGCGCAAGGCGGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS GCA 90 bp TGGTGCGGGTACTGGTGCCGGTGCCGGTACTGGTGCGGGTACTGGTaGCGGTGCCGGTGCCGCCGGGGAAGGAGGCTGAGGCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: WCGYWCRCRYWCGYW*RCRCRRGRRLRRLC
Trigger: GCACAAACGCCTCAGCCTCCTTCCCCGGCGGCACCGGCACCGGCACCAGTACCCGCACCAGTACCGGCACCGGCACCAGTACCCGCACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 90 bp TACTGGTGCGGGTACTGGTGCCGGTGCCGGTACTGGTGCGGGTACTaGTGCCGGTGCCGGTGCCGCCGGGGAAGGAGGCTGAGGCGTTTG +
Preference number: 5 (lower is better)
Translates to: YWCGYWCRCRYWCGY*CRCRCRRGRRLRRL
Trigger: CAAACGCCTCAGCCTCCTTCCCCGGCGGCACCGGCACCGGCACCAGTACCCGCACCAGTACCGGCACCGGCACCAGTACCCGCACCAGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 90 bp CGGTGCCGCCGGGGAAGGAGGCTGAGGCGTTTGTGCTCATGTTTCTaGAGCACGCTGGGCGCTGGGGGCGGTGTTCTGCTTCCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: RCRRGRRLRRLCSCF*STLGAGGGVLLPAA
Trigger: GGCTGCGGGAAGCAGAACACCGCCCCCAGCGCCCAGCGTGCTCCAGAAACATGAGCACAAACGCCTCAGCCTCCTTCCCCGGCGGCACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 90 bp TCCAGGAGGCGGCCTCGGCAGTTGAGGACGTGCTCCACTGGGAACTaGCTAGCGGATCCGAGACGGACCGCCACTCAGAACGGACGCTCC +
Preference number: 5 (lower is better)
Translates to: SRRRPRQLRTCSTGN*LADPRRTATQNGRS
Trigger: GGAGCGTCCGTTCTGAGTGGCGGTCCGTCTCGGATCCGCTAGCCAGTTCCCAGTGGAGCACGTCCTCAACTGCCGAGGCCGCCTCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 90 bp CTGGAGCTCCAGGAGGCGGCCTCGGCAGTTGAGGACGTGCTCCACTaGGAACTGGCTAGCGGATCCGAGACGGACCGCCACTCAGAACGG +
Preference number: 5 (lower is better)
Translates to: LELQEAASAVEDVLH*ELASGSETDRHSER
Trigger: CCGTTCTGAGTGGCGGTCCGTCTCGGATCCGCTAGCCAGTTCCCAGTGGAGCACGTCCTCAACTGCCGAGGCCGCCTCCTGGAGCTCCAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 90 bp AACGGACGCTCCATTCGGACAGGCTGTAGGAGGTGTCGTCCAAGCTaGAGTCCGGGTTCGGGACCTGGGCAGTTGTGCCCCCGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: NGRSIRTGCRRCRPS*SPGSGPGQLCPRLR
Trigger: CCGAAGCCGGGGGCACAACTGCCCAGGTCCCGAACCCGGACTCCAGCTTGGACGACACCTCCTACAGCCTGTCCGAATGGAGCGTCCGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS GCA 90 bp TGTGCTCATGTTTCTGGAGCACGCTGGGCGCTGGGGGCGGTGTTCTaGTTCCCGCAGCCCTTCTCCACGGTCAGGCTGTTCTCGGTACCC +
Preference number: 5 (lower is better)
Translates to: CAHVSGARWALGAVF*FPQPFSTVRLFSVP
Trigger: GGGTACCGAGAACAGCCTGACCGTGGAGAAGGGCTGCGGGAAGCAGAACACCGCCCCCAGCGCCCAGCGTGCTCCAGAAACATGAGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS TCA 90 bp GGCGGGGTAGGTCCTGTTACTAATACCCAGGGAATGCCGGTGTCCTaGTTGGAGGCTGTGACGGCCCCATCGGAGGAGTTCGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GGVGPVTNTQGMPVS*LEAVTAPSEEFELV
Trigger: CACCAGCTCGAACTCCTCCGATGGGGCCGTCACAGCCTCCAATCAGGACACCGGCATTCCCTGGGTATTAGTAACAGGACCTACCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGGACACTGAGGTCAGGTaGGAATCCGGGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLDTEVR*ESGGRV
Trigger: GACCCTGCCCCCGGATTCCAACCTGACCTCAGTGTC...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CAA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACTCGGGACCTGGGCAGTaGTGCCCCCGGCTTCGGGCG +
Preference number: 5 (lower is better)
Translates to: QSTHIGILQRVALGQTSDSGPGQ*CPRLRA
Trigger: CGCCCGAAGCCGGGGGCACAACTGCCCAGGTCCCGA...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS TCA 90 bp ATCACGACTACGTCGAACATGTGGCCCGCGATACTCGCCTTCTCTTaGTTCTCCATGCTTTGGCTGACACGCTCCTGGGTCGTAGGCACA +
Preference number: 5 (lower is better)
Translates to: ITTTSNMWPAILAFS*FSMLWLTRSWVVGT
Trigger: TGTGCCTACGACCCAGGAGCGTGTCAGCCAAAGCATGGAGAATCAAGAGAAGGCGAGTATCGCGGGCCACATGTTCGACGTAGTCGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000497485.1
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGTTGATTCTCCATGCTTaGGCTGACACGCTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: SCLPGGREDASRSWSPTELILHA*ADTLLG
Trigger: ACCCAGGAGCGTGTCAGCCAAAGCATGGAGAATCAA...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGCGTTCCTGGCCACCATaGGTGACAGAGAATATCCGA +
Preference number: 5 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLRSWPP*VTENIR
Trigger: TCGGATATTCTCTGTCACCAATGGTGGCCAGGAACG...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGAATCCTGCCCACGGGTaGACGAATCACCCTTCCATA +
Preference number: 5 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLNPAHG*TNHPSI
Trigger: TATGGAAGGGTGATTCGTCAACCCGTGGGCAGGATT...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGAATCCTGCCCACGGGTaGACGAATCACCCTTCCATA +
Preference number: 5 (lower is better)
Translates to: SCLPGGREDASRSWSPTENPAHG*TNHPSI
Trigger: TATGGAAGGGTGATTCGTCAACCCGTGGGCAGGATT...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGCCGCTGGAACGTCCTTaGATTCAGGTTCTTGTACCC +
Preference number: 5 (lower is better)
Translates to: SCLPGGREDASRSWSPTEPLERP*IQVLVP
Trigger: GGGTACAAGAACCTGAATCAAAGGACGTTCCAGCGG...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGGGCAGGAGCTTGTATTaGTACAGCACAAACCCCAGG +
Preference number: 5 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLGRSLY*YSTNPR
Trigger: CCTGGGGTTTGTGCTGTACAAATACAAGCTCCTGCC...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGGACCGTGGCAGGAGCTaGTATTTGTACAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: SCLPGGREDASRSWSPTEDRGRS*YLYSTN
Trigger: GTTTGTGCTGTACAAATACAAGCTCCTGCCACGGTC...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACGAGCTGGTGGTAGACTaGGGGATCCGACTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: QSTHIGILQRVALGQTSDELVVD*GIRLLG
Trigger: CCCGAGCAGTCGGATCCCCAAGTCTACCACCAGCTC...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS TCA 90 bp GCAGGCCAGAAACAGAGGGCAGGTTCCTTTCCCAGAAGGTGTGGGTaGTTTCTACCGCTGGAACGTCCTTTGATTCAGGTTCTTGTACCC +
Preference number: 5 (lower is better)
Translates to: AGQKQRAGSFPRRCG*FLPLERPLIQVLVP
Trigger: GGGTACAAGAACCTGAATCAAAGGACGTTCCAGCGGTAGAAATCACCCACACCTTCTGGGAAAGGAACCTGCCCTCTGTTTCTGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGAGATTCTGTTTTGGGTaGGTCCCACATAAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: SCLPGGREDASRSWSPTERFCFG*VPHKLH
Trigger: GTGGAGCTTATGTGGGACCAACCCAAAACAGAATCT...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGCCCAGGGTGCATCAGTaGGAATCTCCTTCCCCATGT +
Preference number: 5 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLPRVHQ*ESPSPC
Trigger: ACATGGGGAAGGAGATTCCAACTGATGCACCCTGGG...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGCCATTTGTCAGCATGTaGAGCCTCCCAGGGTGCATC +
Preference number: 5 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLPFVSM*SLPGCI
Trigger: GATGCACCCTGGGAGGCTCAACATGCTGACAAATGG...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACGGGTGCAGGAGGTGCTaGTGGCGACACTGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: QSTHIGILQRVALGQTSDGCRRC*WRHWGN
Trigger: ATTTCCCCAGTGTCGCCACAAGCACCTCCTGCACCC...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CAA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACAAGAGGTGGGCACCCTaGTGGGCCGACATTACTCCT +
Preference number: 5 (lower is better)
Translates to: QSTHIGILQRVALGQTSDKRWAP*WADITP
Trigger: AGGAGTAATGTCGGCCCACAAGGGTGCCCACCTCTT...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGAGGCGGCCTCGGCAGTaGAGGACGTGCTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRRRPRQ*RTCSTG
Trigger: CCCAGTGGAGCACGTCCTCAACTGCCGAGGCCGCCT...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS TCA 90 bp TGGTTCAGCGTCTCTATGATGATGTTGTCACTTGACTGGTCAACGTaGGTGACAGGATGGTTCAGCTTCACTTGGTCTCCGAGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: WFSVSMMMLSLDWST*VTGWFSFTWSPRRS
Trigger: GGACCTCCTCGGAGACCAAGTGAAGCTGAACCATCCTGTCACTCACGTTGACCAGTCAAGTGACAACATCATCATAGAGACGCTGAACCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000497485.1
ENST00000542639.5
CDS CCA 90 bp TTCAGCAGGCCAGAAACAGAGGGCAGGTTCCTTTCCCAGAAGGTGTaGGTGATTTCTACCGCTGGAACGTCCTTTGATTCAGGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: FSRPETEGRFLSQKV*VISTAGTSFDSGSC
Trigger: ACAAGAACCTGAATCAAAGGACGTTCCAGCGGTAGAAATCACCCACACCTTCTGGGAAAGGAACCTGCCCTCTGTTTCTGGCCTGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGTATTCAGTCAAGAGTTaGGCAGCAGATAGTCCTGAA +
Preference number: 5 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLYSVKS*AADSPE
Trigger: TTCAGGACTATCTGCTGCCAAACTCTTGACTGAATA...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338702.4
CDS TCA 90 bp TGTACAGCACAAACCCCAGGGCAGTTACTGATGTGGAAAATCCAATaGTCTTCAGCAGGCCAGAAACAGAGGGCAGGTTCCTTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: CTAQTPGQLLMWKIQ*SSAGQKQRAGSFPR
Trigger: TCTGGGAAAGGAACCTGCCCTCTGTTTCTGGCCTGCTGAAGATCATTGGATTTTCCACATCAGTAACTGCCCTGGGGTTTGTGCTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS CCA 90 bp ACTCGGCGAGAGTTATTAGGTTTAGAATGTCCTTGTGTCGGCAGCTaGAAAGGATTACTGGGTGCAGGAGGTTCTTGTATTGAACCCCGC +
Preference number: 5 (lower is better)
Translates to: TRRELLGLECPCVGS*KGLLGAGGSCIEPR
Trigger: GCGGGGTTCAATACAAGAACCTCCTGCACCCAGTAATCCTTTCCAGCTGCCGACACAAGGACATTCTAAACCTAATAACTCTCGCCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CAA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGGATACTCGCCTTCTCTaGATTCTCCATGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLDTRLL*ILHALA
Trigger: AGCCAAAGCATGGAGAATCAAGAGAAGGCGAGTATC...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGTCTTTCATGGTCATTTaGTCCCATTTGTCAGCATGT +
Preference number: 5 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLSFMVI*SHLSAC
Trigger: ACATGCTGACAAATGGGACAAAATGACCATGAAAGA...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGAGTGACCCATCTGGCTaGGTGTCATCCAAGGTTATT +
Preference number: 5 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLSDPSG*VSSKVI
Trigger: AATAACCTTGGATGACACCAAGCCAGATGGGTCACT...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACCCGCTGGAACGTCCTTaGATTCAGGTTCTTGTACCC +
Preference number: 5 (lower is better)
Translates to: QSTHIGILQRVALGQTSDPLERP*IQVLVP
Trigger: GGGTACAAGAACCTGAATCAAAGGACGTTCCAGCGG...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACGGCAGGAGCTTGTATTaGTACAGCACAAACCCCAGG +
Preference number: 5 (lower is better)
Translates to: QSTHIGILQRVALGQTSDGRSLY*YSTNPR
Trigger: CCTGGGGTTTGTGCTGTACAAATACAAGCTCCTGCC...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCAGGGAGTCCTCCTGGGGGACAGTCCTGCCACTATTTTCCTCTGCTCAACTGAGGATAGGCAAAACTTaGGAAGATTTATGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: SRESSWGTVLPLFSSAQLRIGKT*EDLCPH
Trigger: GTGAGGACATAAATCTTCCAAAGTTTTGCCTATCCT...CAGTTGAGCAGAGGAAAATAGTGGCAGGACTGTCCCCCAGGAGGACTCCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGTATGGTATCTTCACGTaGGATGAACTTGCATATCGT +
Preference number: 5 (lower is better)
Translates to: SCLPGGREDASRSWSPTEYGIFT*DELAYR
Trigger: ACGATATGCAAGTTCATCCAACGTGAAGATACCATA...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCCCCCGGAGGCCACTCTaGGAGTCGGAGTCAGTACTC +
Preference number: 5 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLPRRPL*ESESVL
Trigger: GAGTACTGACTCCGACTCCAAGAGTGGCCTCCGGGG...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS TCA 90 bp TGGCAGGAGCTTGTATTTGTACAGCACAAACCCCAGGGCAGTTACTaGTGTGGAAAATCCAATGATCTTCAGCAGGCCAGAAACAGAGGG +
Preference number: 5 (lower is better)
Translates to: WQELVFVQHKPQGSY*CGKSNDLQQARNRG
Trigger: CCCTCTGTTTCTGGCCTGCTGAAGATCATTGGATTTTCCACATCAGTAACTGCCCTGGGGTTTGTGCTGTACAAATACAAGCTCCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS-3UTR CAA 90 bp AGCTGCCTTCCAGGGGGAAGAGAAGATGCCAGTCGTAGTTGGTCTCCCACAGAGTGTCATCCAAGGTTATaGAAATTGGAGCATCTTCAT +
Preference number: 5 (lower is better)
Translates to: SCLPGGREDASRSWSPTECHPRL*KLEHLH
Trigger: ATGAAGATGCTCCAATTTCAATAACCTTGGATGACA...CTCTGTGGGAGACCAACTACGACTGGCATCTTCTCTTCCCCCTGGAAGGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACGACCGTGGCAGGAGCTaGTATTTGTACAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: QSTHIGILQRVALGQTSDDRGRS*YLYSTN
Trigger: GTTTGTGCTGTACAAATACAAGCTCCTGCCACGGTC...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACACTGACAAGGATCCATaGGTGTCTAGCTGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: QSTHIGILQRVALGQTSDTDKDP*VSSCLP
Trigger: TGGAAGGCAGCTAGACACCAATGGATCCTTGTCAGT...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGTATTCAGTCAAGAGTTaGGCAGCAGATAGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLYSVKS*AADSLS
Trigger: GGAGAGACTATCTGCTGCCAAACTCTTGACTGAATA...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CAA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTGCGGGGCGAACCCTTTaGCTGATACTCCGGGAGCGC +
Preference number: 5 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSAGRTL*LILRER
Trigger: GCGCTCCCGGAGTATCAGCAAAAGGGTTCGCCCCGC...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CAA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGTATAATAAACTTGGGTaGGCTGGTTTCCCTGGCAAT +
Preference number: 5 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLYNKLG*AGFPGN
Trigger: ATTGCCAGGGAAACCAGCCAACCCAAGTTTATTATA...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGCATACATGTATGTTTTaGCTGGTACTGGCTGGAACT +
Preference number: 5 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLHTCMF*LVLAGT
Trigger: AGTTCCAGCCAGTACCAGCAAAAACATACATGTATG...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS TCA 90 bp TCAATGAGCTCTTTCATGGTCATTTTGTCCCATTTGTCAGCATGTTaGGCCTCCCAGGGTGCATCAGTTGGAATCTCCTTCCCCATGTTA +
Preference number: 5 (lower is better)
Translates to: SMSSFMVILSHLSAC*ASQGASVGISFPML
Trigger: TAACATGGGGAAGGAGATTCCAACTGATGCACCCTGGGAGGCTCAACATGCTGACAAATGGGACAAAATGACCATGAAAGAGCTCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000497485.1
ENST00000542639.5
CDS CCA 90 bp TCCTCTGATGCTCCAACATACATGTATGTTTTTGCTGGTACTGGCTaGAACTGGCAAAGCAACAGTTCATGCCAATCTCTTCTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SSDAPTYMYVFAGTG*NWQSNSSCQSLLLA
Trigger: GGCCAAGAGAAGAGATTGGCATGAACTGTTGCTTTGCCAGTTCCAGCCAGTACCAGCAAAAACATACATGTATGTTGGAGCATCAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497485.1
ENST00000542639.5
CDS-3UTR CAA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGTCTTTCATGGTCATTTaGTCCCATTTGTCAGCATGT +
Preference number: 5 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLSFMVI*SHLSAC
Trigger: ACATGCTGACAAATGGGACAAAATGACCATGAAAGA...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGTTTGTCCAGCAGATTTaGTCAATGAGCTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLFVQQI*SMSSFM
Trigger: CATGAAAGAGCTCATTGACAAAATCTGCTGGACAAA...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACAAGAGGTGGGCACCCTaGTGGGCCGACATTACTCCT +
Preference number: 5 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHKRWAP*WADITP
Trigger: AGGAGTAATGTCGGCCCACAAGGGTGCCCACCTCTT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGAATGATATAATAAACTaGGGTTGGCTGGTTTCCCTG +
Preference number: 5 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLNDIIN*GWLVSL
Trigger: CAGGGAAACCAGCCAACCCAAGTTTATTATATCATT...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGAGGAGGCTGAGGCGTTaGTGCTCATGTTTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRRRLRR*CSCFWS
Trigger: GCTCCAGAAACATGAGCACAAACGCCTCAGCCTCCT...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CAA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGCAGGAGGTTCTTGTATaGAACCCCGCGGAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRQEVLV*NPAECQ
Trigger: CTGACACTCCGCGGGGTTCAATACAAGAACCTCCTG...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS TCA 90 bp CTCATAATGTTCATGGTTCAGCGTCTCTATGATGATGTTGTCACTTaGCTGGTCAACGTGAGTGACAGGATGGTTCAGCTTCACTTGGTC +
Preference number: 5 (lower is better)
Translates to: LIMFMVQRLYDDVVT*LVNVSDRMVQLHLV
Trigger: GACCAAGTGAAGCTGAACCATCCTGTCACTCACGTTGACCAGTCAAGTGACAACATCATCATAGAGACGCTGAACCATGAACATTATGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCCGTTCCTGGCCACCATaGGTGACAGAGAATATCCGA +
Preference number: 5 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLRSWPP*VTENIR
Trigger: TCGGATATTCTCTGTCACCAATGGTGGCCAGGAACG...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TCTGAGGGTCTGCATGCCGCTACCCCCAACACTGCTTTCCTTTACTATTTCCTGGTCAATATTTTCCTCTaGGTGGTATTGAAAACCAGT +
Preference number: 5 (lower is better)
Translates to: SEGLHAATPNTAFLYYFLVNIFL*VVLKTS
Trigger: ACTGGTTTTCAATACCACCAAGAGGAAAATATTGAC...CAGGAAATAGTAAAGGAAAGCAGTGTTGGGGGTAGCGGCATGCAGACCCTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCACTTGCGAAAGGTCATaGGGTATAGGAGGTCCCCGT +
Preference number: 5 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLTCERS*GIGGPR
Trigger: ACGGGGACCTCCTATACCCAATGACCTTTCGCAAGT...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CAA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCATTGATTCTCCATGCTTaGGCTGACACGCTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: FLWFREKAYGIFTLDELALILHA*ADTLLG
Trigger: ACCCAGGAGCGTGTCAGCCAAAGCATGGAGAATCAA...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGTTTCCCCTTGACATATaGAACGAGACGCTCACTGAC +
Preference number: 5 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRFPLDI*NETLTD
Trigger: GTCAGTGAGCGTCTCGTTCAATATGTCAAGGGGAAA...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGTATCCGTTCGCTCACTaGACCAGATCCACCTACAAA +
Preference number: 5 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRYPFAH*TRSTYK
Trigger: TTTGTAGGTGGATCTGGTCAAGTGAGCGAACGGATA...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp CAAAGCACACACATAGGTATACTCCAACGTGTAGCACTGGGGCAAACTTCAGACAGAAGTATTTTACAGTaGAAACCTTTGGAAAGGGCT +
Preference number: 5 (lower is better)
Translates to: QSTHIGILQRVALGQTSDRSILQ*KPLERA
Trigger: AGCCCTTTCCAAAGGTTTCAACTGTAAAATACTTCT...GTCTGAAGTTTGCCCCAGTGCTACACGTTGGAGTATACCTATGTGTGTGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAACTGGGGAAATGTTATaGGGTAGAGGTGGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: FLWFREKAYGIFTLDELATGEML*GRGGPG
Trigger: ACCAGGACCACCTCTACCCAATAACATTTCCCCAGT...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CAA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACTATCCGTTCGCTCACTaGACCAGATCCACCTACAAA +
Preference number: 5 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHYPFAH*TRSTYK
Trigger: TTTGTAGGTGGATCTGGTCAAGTGAGCGAACGGATA...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp GATTTATGTCCTCACACCAGGGTCCAGCAACTTAGGTTTGAATTTATGATAAGGGTCTCTATGATGATGTaGTCACTTGACTGGTCAACG +
Preference number: 5 (lower is better)
Translates to: DLCPHTRVQQLRFEFMIRVSMMM*SLDWST
Trigger: CGTTGACCAGTCAAGTGACAACATCATCATAGAGAC...CCTTATCATAAATTCAAACCTAAGTTGCTGGACCCTGGTGTGAGGACATAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAAGTGACCCATCTGGCTaGGTGTCATCCAAGGTTATT +
Preference number: 5 (lower is better)
Translates to: FLWFREKAYGIFTLDELASDPSG*VSSKVI
Trigger: AATAACCTTGGATGACACCAAGCCAGATGGGTCACT...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACAATCACCCTTCCATATaGAGTCATGATCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHNHPSI*SHDPRR
Trigger: CCTCCTGGGATCATGACTCAATATGGAAGGGTGATT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCAAATCACCCTTCCATATaGAGTCATGATCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: FLWFREKAYGIFTLDELANHPSI*SHDPRR
Trigger: CCTCCTGGGATCATGACTCAATATGGAAGGGTGATT...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACTCACGTTGGATGAACTaGCATATCGTGAGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHSRWMN*HIVRVL
Trigger: GAGGACTCTCACGATATGCAAGTTCATCCAACGTGA...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCATCACGTTGGATGAACTaGCATATCGTGAGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: FLWFREKAYGIFTLDELASRWMN*HIVRVL
Trigger: GAGGACTCTCACGATATGCAAGTTCATCCAACGTGA...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTAGGTTTAGAATGTCCTaGTGTCGGCAGCTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSRFRMS*CRQLER
Trigger: CCTTTCCAGCTGCCGACACAAGGACATTCTAAACCT...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS-3UTR CAA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTGATACTCGCCTTCTCTaGATTCTCCATGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSDTRLL*ILHALA
Trigger: AGCCAAAGCATGGAGAATCAAGAGAAGGCGAGTATC...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTTTCCCCTTGACATATaGAACGAGACGCTCACTGAC +
Preference number: 5 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSFPLDI*NETLTD
Trigger: GTCAGTGAGCGTCTCGTTCAATATGTCAAGGGGAAA...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS TCA 90 bp ATGACACAGCCTTTAAACTTGTCAATATTTTCCTCTTGGTGGTATTaGAAACCAGTGAGCAGAGAGCATAAGAACAGAACTTCAAGACCG +
Preference number: 5 (lower is better)
Translates to: MTQPLNLSIFSSWWY*KPVSREHKNRTSRP
Trigger: CGGTCTTGAAGTTCTGTTCTTATGCTCTCTGCTCACTGGTTTTCAATACCACCAAGAGGAAAATATTGACAAGTTTAAAGGCTGTGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS-3UTR CAA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCTCCCCATGTTATCTATaGTCCTCCACAGATTATTGT +
Preference number: 5 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLSPCYL*SSTDYC
Trigger: ACAATAATCTGTGGAGGACAATAGATAACATGGGGA...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTGTCTCTATGATGATGTaGTCACTTGACTGGTCAACG +
Preference number: 5 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSVSMMM*SLDWST
Trigger: CGTTGACCAGTCAAGTGACAACATCATCATAGAGAC...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCAATGATATAATAAACTaGGGTTGGCTGGTTTCCCTG +
Preference number: 5 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLNDIIN*GWLVSL
Trigger: CAGGGAAACCAGCCAACCCAAGTTTATTATATCATT...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACTTTGTCCAGCAGATTTaGTCAATGAGCTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHFVQQI*SMSSFM
Trigger: CATGAAAGAGCTCATTGACAAAATCTGCTGGACAAA...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AATATGCGGCAACTCCTTATGTACTGGAGCGTATCCAATACATTCTCAAAACTCTGTCATCCAAGGTTATaGAAATTGGAGCATCTTCAT +
Preference number: 5 (lower is better)
Translates to: NMRQLLMYWSVSNTFSKLCHPRL*KLEHLH
Trigger: ATGAAGATGCTCCAATTTCAATAACCTTGGATGACA...GAGTTTTGAGAATGTATTGGATACGCTCCAGTACATAAGGAGTTGCCGCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TTTCTCTGGTTCAGAGAAAAAGCTTATGGTATCTTCACGTTGGATGAACTTGCATATGGTATCTTCACGTaGGATGAACTTGCATATCGT +
Preference number: 5 (lower is better)
Translates to: FLWFREKAYGIFTLDELAYGIFT*DELAYR
Trigger: ACGATATGCAAGTTCATCCAACGTGAAGATACCATA...TGCAAGTTCATCCAACGTGAAGATACCATAAGCTTTTTCTCTGAACCAGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCCCCATGTTATCTATaGTCCTCCACAGATTATTGT +
Preference number: 5 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSSPCYL*SSTDYC
Trigger: ACAATAATCTGTGGAGGACAATAGATAACATGGGGA...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp TTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTTCACAGAAGTATTTTACAGTaGAAACCTTTGGAAAGGGCT +
Preference number: 5 (lower is better)
Translates to: FRHGTLGTKFTITLNIVHRSILQ*KPLERA
Trigger: AGCCCTTTCCAAAGGTTTCAACTGTAAAATACTTCT...GTGAACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS-3UTR CAA 90 bp AAACTTCAGACATGGAACATTAGGCACCAAGTTCACAATCACACTAAACATAGTAGGATAGGCAAAACTTaGGAAGATTTATGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: KLQTWNIRHQVHNHTKHSRIGKT*EDLCPH
Trigger: GTGAGGACATAAATCTTCCAAAGTTTTGCCTATCCT...ACTATGTTTAGTGTGATTGTGAACTTGGTGCCTAATGTTCCATGTCTGAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS GCA 72 bp CTTCGGGCGGGCCCTCCGCCTTGCGCTCGGTGCCGGTaGCGGTACTGGTGCGGGTACTGGTGCCGGTGCCGG +
Preference number: 6 (lower is better)
Translates to: LRAGPPPCARCR*RYWCGYWCRCR
Trigger: CCGGCACCGGCACCAGTACCCGCACCAGTACCGGCACCGGCACCGAGCGCAAGGCGGAGGGCCCGCCCGAAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS GCA 72 bp CAGTTGTGCCCCCGGCTTCGGGCGGGCCCTCCGCCTTaGGCTCGGTGCCGGTGCCGGTACTGGTGCGGGTAC +
Preference number: 6 (lower is better)
Translates to: QLCPRLRAGPPP*ARCRCRYWCGY
Trigger: GTACCCGCACCAGTACCGGCACCGGCACCGAGCGCAAGGCGGAGGGCCCGCCCGAAGCCGGGGGCACAACTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CAA 72 bp GCAGTTGTGCCCCCGGCTTCGGGCGGGCCCTCCGCCTaGCGCTCGGTGCCGGTGCCGGTACTGGTGCGGGTA +
Preference number: 6 (lower is better)
Translates to: AVVPPASGGPSA*RSVPVPVLVRV
Trigger: TACCCGCACCAGTACCGGCACCGGCACCGAGCGCAAGGCGGAGGGCCCGCCCGAAGCCGGGGGCACAACTGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS GCA 72 bp CCAAGCTGGAGTCCGGGTTCGGGACCTGGGCAGTTGTaGCCCCGGCTTCGGGCGGGCCCTCCGCCTTGCGCT +
Preference number: 6 (lower is better)
Translates to: PSWSPGSGPGQL*PRLRAGPPPCA
Trigger: AGCGCAAGGCGGAGGGCCCGCCCGAAGCCGGGGGCACAACTGCCCAGGTCCCGAACCCGGACTCCAGCTTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 72 bp GGGTACTGGTGCCGGTGCCGGTACTGGTGCGGGTACTaGTGCCGGTGCCGGTGCCGCCGGGGAAGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GYWCRCRYWCGY*CRCRCRRGRRL
Trigger: CAGCCTCCTTCCCCGGCGGCACCGGCACCGGCACCAGTACCCGCACCAGTACCGGCACCGGCACCAGTACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CAA 72 bp CGTCCAAGCTGGAGTCCGGGTTCGGGACCTGGGCAGTaGTGCCCCCGGCTTCGGGCGGGCCCTCCGCCTTGC +
Preference number: 6 (lower is better)
Translates to: RPSWSPGSGPGQ*CPRLRAGPPPC
Trigger: GCAAGGCGGAGGGCCCGCCCGAAGCCGGGGGCACAACTGCCCAGGTCCCGAACCCGGACTCCAGCTTGGACG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CAA 90 bp AGGAGGTGTCGTCCAAGCTGGAGTCCGGGTTCGGGACCTGGGCAGTaGTGCCCCCGGCTTCGGGCGGGCCCTCCGCCTTGCGCTCGGTGC +
Preference number: 6 (lower is better)
Translates to: RRCRPSWSPGSGPGQ*CPRLRAGPPPCARC
Trigger: GCACCGAGCGCAAGGCGGAGGGCCCGCCCGAAGCCGGGGGCACAACTGCCCAGGTCCCGAACCCGGACTCCAGCTTGGACGACACCTCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 72 bp GAGGTGTCGTCCAAGCTGGAGTCCGGGTTCGGGACCTaGGCAGTTGTGCCCCCGGCTTCGGGCGGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: EVSSKLESGFGT*AVVPPASGGPS
Trigger: GGAGGGCCCGCCCGAAGCCGGGGGCACAACTGCCCAGGTCCCGAACCCGGACTCCAGCTTGGACGACACCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 72 bp CAGGAGGCGGCCTCGGCAGTTGAGGACGTGCTCCACTaGGAACTGGCTAGCGGATCCGAGACGGACCGCCAC +
Preference number: 6 (lower is better)
Translates to: QEAASAVEDVLH*ELASGSETDRH
Trigger: GTGGCGGTCCGTCTCGGATCCGCTAGCCAGTTCCCAGTGGAGCACGTCCTCAACTGCCGAGGCCGCCTCCTG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS GCA 72 bp TGGAGCTCCAGGAGGCGGCCTCGGCAGTTGAGGACGTaGTCCACTGGGAACTGGCTAGCGGATCCGAGACGG +
Preference number: 6 (lower is better)
Translates to: WSSRRRPRQLRT*STGNWLADPRR
Trigger: CCGTCTCGGATCCGCTAGCCAGTTCCCAGTGGAGCACGTCCTCAACTGCCGAGGCCGCCTCCTGGAGCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 72 bp CGGCCTCGGCAGTTGAGGACGTGCTCCACTGGGAACTaGCTAGCGGATCCGAGACGGACCGCCACTCAGAAC +
Preference number: 6 (lower is better)
Translates to: RPRQLRTCSTGN*LADPRRTATQN
Trigger: GTTCTGAGTGGCGGTCCGTCTCGGATCCGCTAGCCAGTTCCCAGTGGAGCACGTCCTCAACTGCCGAGGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 72 bp CGGGGAAGGAGGCTGAGGCGTTTGTGCTCATGTTTCTaGAGCACGCTGGGCGCTGGGGGCGGTGTTCTGCTT +
Preference number: 6 (lower is better)
Translates to: RGRRLRRLCSCF*STLGAGGGVLL
Trigger: AAGCAGAACACCGCCCCCAGCGCCCAGCGTGCTCCAGAAACATGAGCACAAACGCCTCAGCCTCCTTCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 72 bp TCCATTCGGACAGGCTGTAGGAGGTGTCGTCCAAGCTaGAGTCCGGGTTCGGGACCTGGGCAGTTGTGCCCC +
Preference number: 6 (lower is better)
Translates to: SIRTGCRRCRPS*SPGSGPGQLCP
Trigger: GGGGCACAACTGCCCAGGTCCCGAACCCGGACTCCAGCTTGGACGACACCTCCTACAGCCTGTCCGAATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CAA 72 bp AGTGTATGCTGGAGCTCCAGGAGGCGGCCTCGGCAGTaGAGGACGTGCTCCACTGGGAACTGGCTAGCGGAT +
Preference number: 6 (lower is better)
Translates to: SVCWSSRRRPRQ*RTCSTGNWLAD
Trigger: ATCCGCTAGCCAGTTCCCAGTGGAGCACGTCCTCAACTGCCGAGGCCGCCTCCTGGAGCTCCAGCATACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CAA 90 bp GAACATGTGGCCCGCGATACTCGCCTTCTCTTGATTCTCCATGCTTaGGCTGACACGCTCCTGGGTCGTAGGCACAGGAGTGGGGACGGC +
Preference number: 6 (lower is better)
Translates to: EHVARDTRLLLILHA*ADTLLGRRHRSGDG
Trigger: GCCGTCCCCACTCCTGTGCCTACGACCCAGGAGCGTGTCAGCCAAAGCATGGAGAATCAAGAGAAGGCGAGTATCGCGGGCCACATGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CCA 72 bp GGAGTCAGTACTCTCGCTAAGACCGGTAGTGCTGATTaGGGAGTGTATGCTGGAGCTCCAGGAGGCGGCCTC +
Preference number: 6 (lower is better)
Translates to: GVSTLAKTGSAD*GVYAGAPGGGL
Trigger: GAGGCCGCCTCCTGGAGCTCCAGCATACACTCCCCAATCAGCACTACCGGTCTTAGCGAGAGTACTGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS TCA 72 bp GGTCCTGTTACTAATACCCAGGGAATGCCGGTGTCCTaGTTGGAGGCTGTGACGGCCCCATCGGAGGAGTTC +
Preference number: 6 (lower is better)
Translates to: GPVTNTQGMPVS*LEAVTAPSEEF
Trigger: GAACTCCTCCGATGGGGCCGTCACAGCCTCCAATCAGGACACCGGCATTCCCTGGGTATTAGTAACAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CAA 72 bp GCTGGAAAGGATTACTGGGTGCAGGAGGTTCTTGTATaGAACCCCGCGGAGTGTCAGGCACTGAGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: AGKDYWVQEVLV*NPAECQALRWG
Trigger: CCCCCACCTCAGTGCCTGACACTCCGCGGGGTTCAATACAAGAACCTCCTGCACCCAGTAATCCTTTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CAA 90 bp GATCACGACTACGTCGAACATGTGGCCCGCGATACTCGCCTTCTCTaGATTCTCCATGCTTTGGCTGACACGCTCCTGGGTCGTAGGCAC +
Preference number: 6 (lower is better)
Translates to: DHDYVEHVARDTRLL*ILHALADTLLGRRH
Trigger: GTGCCTACGACCCAGGAGCGTGTCAGCCAAAGCATGGAGAATCAAGAGAAGGCGAGTATCGCGGGCCACATGTTCGACGTAGTCGTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000497485.1
ENST00000542639.5
CDS TCA 72 bp ATCCACCTACAAACTTCCGTTCCTGGCCACCATTGGTaGCAGAGAATATCCGAGTGGTGCCCCCGCACTGCT +
Preference number: 6 (lower is better)
Translates to: IHLQTSVPGHHW*QRISEWCPRTA
Trigger: AGCAGTGCGGGGGCACCACTCGGATATTCTCTGTCACCAATGGTGGCCAGGAACGGAAGTTTGTAGGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000497485.1
ENST00000542639.5
CDS CAA 72 bp TACGTCGAACATGTGGCCCGCGATACTCGCCTTCTCTaGATTCTCCATGCTTTGGCTGACACGCTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: YVEHVARDTRLL*ILHALADTLLG
Trigger: ACCCAGGAGCGTGTCAGCCAAAGCATGGAGAATCAAGAGAAGGCGAGTATCGCGGGCCACATGTTCGACGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000497485.1
ENST00000542639.5
CDS TCA 72 bp GTCTCTGTGCCCGCAAAGAAAATCCTGCCCACGGGTTaGCGAATCACCCTTCAAGGGAACCAAGAGGTTACA +
Preference number: 6 (lower is better)
Translates to: VSVPAKKILPTG*RITLQGNQEVT
Trigger: TGTAACCTCTTGGTTCCCTTGAAGGGTGATTCGTCAACCCGTGGGCAGGATTTTCTTTGCGGGCACAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490604.1
CDS CCA 72 bp CAAATATCCAAGTGTAGTCGGACACTGAGGTCAGGTTaGAATCCGGGGGCAGGGTCGGTCCTTTTACCAAAC +
Preference number: 6 (lower is better)
Translates to: QISKCSRTLRSG*NPGAGSVLLPN
Trigger: GTTTGGTAAAAGGACCGACCCTGCCCCCGGATTCCAACCTGACCTCAGTGTCCGACTACACTTGGATATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CAA 72 bp AGTCTCTGTGCCCGCAAAGAAAATCCTGCCCACGGGTaGACGAATCACCCTTCAAGGGAACCAAGAGGTTAC +
Preference number: 6 (lower is better)
Translates to: SLCARKENPAHG*TNHPSREPRGY
Trigger: GTAACCTCTTGGTTCCCTTGAAGGGTGATTCGTCAACCCGTGGGCAGGATTTTCTTTGCGGGCACAGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490604.1
CDS TCA 72 bp CAAACCCCAGGGCAGTTACTGATGTGGAAAATCCAATaGTCTTCAGCAGGCCAGAAACAGAGGGCAGGTTCC +
Preference number: 6 (lower is better)
Translates to: QTPGQLLMWKIQ*SSAGQKQRAGS
Trigger: GGAACCTGCCCTCTGTTTCTGGCCTGCTGAAGATCATTGGATTTTCCACATCAGTAACTGCCCTGGGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS CCA 72 bp CCAGAAACAGAGGGCAGGTTCCTTTCCCAGAAGGTGTaGGTGATTTCTACCGCTGGAACGTCCTTTGATTCA +
Preference number: 6 (lower is better)
Translates to: PETEGRFLSQKV*VISTAGTSFDS
Trigger: TGAATCAAAGGACGTTCCAGCGGTAGAAATCACCCACACCTTCTGGGAAAGGAACCTGCCCTCTGTTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS CAA 72 bp AGTCTCTGTGCCCGCAAAGAAAATCCTGCCCACGGGTaGACGAATCACCCTTCCATATTGAGTCATGATCCC +
Preference number: 6 (lower is better)
Translates to: SLCARKENPAHG*TNHPSILSHDP
Trigger: GGGATCATGACTCAATATGGAAGGGTGATTCGTCAACCCGTGGGCAGGATTTTCTTTGCGGGCACAGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS TCA 72 bp AAACAGAGGGCAGGTTCCTTTCCCAGAAGGTGTGGGTaGTTTCTACCGCTGGAACGTCCTTTGATTCAGGTT +
Preference number: 6 (lower is better)
Translates to: KQRAGSFPRRCG*FLPLERPLIQV
Trigger: AACCTGAATCAAAGGACGTTCCAGCGGTAGAAATCACCCACACCTTCTGGGAAAGGAACCTGCCCTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS CAA 90 bp CGGGCAAGAATGAAGCCCATGATGGCAGGCAGTGACCCATCTGGCTaGGTGTCATCCAAGGTTATTGAAATTGGAGCATCTTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: RARMKPMMAGSDPSG*VSSKVIEIGASSSS
Trigger: TGAAGATGAAGATGCTCCAATTTCAATAACCTTGGATGACACCAAGCCAGATGGGTCACTGCCTGCCATCATGGGCTTCATTCTTGCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS TCA 72 bp GTCTCTATGATGATGTTGTCACTTGACTGGTCAACGTaGGTGACAGGATGGTTCAGCTTCACTTGGTCTCCG +
Preference number: 6 (lower is better)
Translates to: VSMMMLSLDWST*VTGWFSFTWSP
Trigger: CGGAGACCAAGTGAAGCTGAACCATCCTGTCACTCACGTTGACCAGTCAAGTGACAACATCATCATAGAGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000497485.1
ENST00000542639.5
CDS CCA 72 bp GTGAGCAGAGAGCATAAGAACAGAACTTCAAGACCGTaGCAGGAGCTTGTATTTGTACAGCACAAACCCCAG +
Preference number: 6 (lower is better)
Translates to: VSREHKNRTSRP*QELVFVQHKPQ
Trigger: CTGGGGTTTGTGCTGTACAAATACAAGCTCCTGCCACGGTCTTGAAGTTCTGTTCTTATGCTCTCTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS CAA 72 bp ATGAAGCCCATGATGGCAGGCAGTGACCCATCTGGCTaGGTGTCATCCAAGGTTATTGAAATTGGAGCATCT +
Preference number: 6 (lower is better)
Translates to: MKPMMAGSDPSG*VSSKVIEIGAS
Trigger: AGATGCTCCAATTTCAATAACCTTGGATGACACCAAGCCAGATGGGTCACTGCCTGCCATCATGGGCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS CAA 72 bp AGAACAGAACTTCAAGACCGTGGCAGGAGCTTGTATTaGTACAGCACAAACCCCAGGGCAGTTACTGATGTG +
Preference number: 6 (lower is better)
Translates to: RTELQDRGRSLY*YSTNPRAVTDV
Trigger: CACATCAGTAACTGCCCTGGGGTTTGTGCTGTACAAATACAAGCTCCTGCCACGGTCTTGAAGTTCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS CAA 90 bp GTCAATGAGCTCTTTCATGGTCATTTTGTCCCATTTGTCAGCATGTaGAGCCTCCCAGGGTGCATCAGTTGGAATCTCCTTCCCCATGTT +
Preference number: 6 (lower is better)
Translates to: VNELFHGHFVPFVSM*SLPGCISWNLLPHV
Trigger: AACATGGGGAAGGAGATTCCAACTGATGCACCCTGGGAGGCTCAACATGCTGACAAATGGGACAAAATGACCATGAAAGAGCTCATTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000497485.1
ENST00000542639.5
CDS CAA 90 bp GAGAGCATAAGAACAGAACTTCAAGACCGTGGCAGGAGCTTGTATTaGTACAGCACAAACCCCAGGGCAGTTACTGATGTGGAAAATCCA +
Preference number: 6 (lower is better)
Translates to: ESIRTELQDRGRSLY*YSTNPRAVTDVENP
Trigger: TGGATTTTCCACATCAGTAACTGCCCTGGGGTTTGTGCTGTACAAATACAAGCTCCTGCCACGGTCTTGAAGTTCTGTTCTTATGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS TCA 72 bp TCTTTCATGGTCATTTTGTCCCATTTGTCAGCATGTTaGGCCTCCCAGGGTGCATCAGTTGGAATCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SFMVILSHLSAC*ASQGASVGISF
Trigger: GAAGGAGATTCCAACTGATGCACCCTGGGAGGCTCAACATGCTGACAAATGGGACAAAATGACCATGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000497485.1
ENST00000542639.5
CDS TCA 72 bp ATCATGCACTTAATGACAGCTCCCATTGGAAGCCGCTaGATTAACTGGTTTCTCTCTGCTGGAAGCTCTGGT +
Preference number: 6 (lower is better)
Translates to: IMHLMTAPIGSR*INWFLSAGSSG
Trigger: ACCAGAGCTTCCAGCAGAGAGAAACCAGTTAATTCAGCGGCTTCCAATGGGAGCTGTCATTAAGTGCATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338702.4
ENST00000542639.5
CDS CAA 72 bp CTCTTTCATGGTCATTTTGTCCCATTTGTCAGCATGTaGAGCCTCCCAGGGTGCATCAGTTGGAATCTCCTT +
Preference number: 6 (lower is better)
Translates to: LFHGHFVPFVSM*SLPGCISWNLL
Trigger: AAGGAGATTCCAACTGATGCACCCTGGGAGGCTCAACATGCTGACAAATGGGACAAAATGACCATGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000497485.1
ENST00000542639.5
CDS CAA 72 bp AGCATAAGAACAGAACTTCAAGACCGTGGCAGGAGCTaGTATTTGTACAGCACAAACCCCAGGGCAGTTACT +
Preference number: 6 (lower is better)
Translates to: SIRTELQDRGRS*YLYSTNPRAVT
Trigger: AGTAACTGCCCTGGGGTTTGTGCTGTACAAATACAAGCTCCTGCCACGGTCTTGAAGTTCTGTTCTTATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS TCA 72 bp TTCATGGTTCAGCGTCTCTATGATGATGTTGTCACTTaGCTGGTCAACGTGAGTGACAGGATGGTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: FMVQRLYDDVVT*LVNVSDRMVQL
Trigger: AAGCTGAACCATCCTGTCACTCACGTTGACCAGTCAAGTGACAACATCATCATAGAGACGCTGAACCATGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000497485.1
ENST00000542639.5
CDS TCA 72 bp CTTGTATTTGTACAGCACAAACCCCAGGGCAGTTACTaGTGTGGAAAATCCAATGATCTTCAGCAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: LVFVQHKPQGSY*CGKSNDLQQAR
Trigger: TCTGGCCTGCTGAAGATCATTGGATTTTCCACATCAGTAACTGCCCTGGGGTTTGTGCTGTACAAATACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338702.4
ENST00000490604.1
ENST00000542639.5
CDS CCA 72 bp GCTCCAACATACATGTATGTTTTTGCTGGTACTGGCTaGAACTGGCAAAGCAACAGTTCATGCCAATCTCTT +
Preference number: 6 (lower is better)
Translates to: APTYMYVFAGTG*NWQSNSSCQSL
Trigger: AAGAGATTGGCATGAACTGTTGCTTTGCCAGTTCCAGCCAGTACCAGCAAAAACATACATGTATGTTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497485.1
ENST00000542639.5
CDS CCA 72 bp GAGTTATTAGGTTTAGAATGTCCTTGTGTCGGCAGCTaGAAAGGATTACTGGGTGCAGGAGGTTCTTGTATT +
Preference number: 6 (lower is better)
Translates to: ELLGLECPCVGS*KGLLGAGGSCI
Trigger: AATACAAGAACCTCCTGCACCCAGTAATCCTTTCCAGCTGCCGACACAAGGACATTCTAAACCTAATAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542639.5
CDS CAA 72 bp AAAACCAAAACACTAACGCCATATTCAGTCAAGAGTTaGGCAGCAGATAGTCCTGAAATGCCACCTCCGATC +
Preference number: 6 (lower is better)
Translates to: KTKTLTPYSVKS*AADSPEMPPPI
Trigger: GATCGGAGGTGGCATTTCAGGACTATCTGCTGCCAAACTCTTGACTGAATATGGCGTTAGTGTTTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338702.4