Pregenerated sensors for MANF (Homo sapiens)
Ensembl gene IDs: ENSG00000145050Ensembl transcript IDs: ENST00000446668.5, ENST00000470900.1, ENST00000528157.7, ENST00000649711.1
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGTCCTAGAGTACACCAGCAACAGAAGGAAGGGAATCCCCTCATaGGGGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: EVLEYTSNRRKGIPS*GYCRASIIRKAPGF Trigger: GAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACCCCCATGAGGGGATTCCCTTCCTTCTGTTGCTGGTGTACTCTAGGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| 3UTR TCA 90 bp | CTTCTCACAGATCTTCTCCACAGGGATGTGGTGGGCCAGAGGCTTTaGTACCTCATTGATGATTTTGGTGGCTGCATCATCTGTGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: LLTDLLHRDVVGQRL*YLIDDFGGCIICGP Trigger: GGGGCCACAGATGATGCAGCCACCAAAATCATCAATGAGGTATCAAAGCCTCTGGCCCACCACATCCCTGTGGAGAAGATCTGTGAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR CCA 90 bp | GGTGCCCTGCCTGTACTGGTAGTCAGATTCAGCCAGTGTAAACCCTaGACTCTTAACACATGCTCAGTCCAAGCTGACAGCCACCAAATG | + |
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Preference number: 1 (lower is better) Translates to: GALPVLVVRFSQCKP*TLNTCSVQADSHQM Trigger: CATTTGGTGGCTGTCAGCTTGGACTGAGCATGTGTTAAGAGTCCAGGGTTTACACTGGCTGAATCTGACTACCAGTACAGGCAGGGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR GCA 90 bp | CCCCCTCAGGTGCAACAGAGATTGAGCAGACTACAAATCGGTCCGTaGACTGGCTGCCTTGGGGGCATATTTAGGCATCAGTTCATTTAT | + |
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Preference number: 1 (lower is better) Translates to: PPQVQQRLSRLQIGP*TGCLGGIFRHQFIY Trigger: ATAAATGAACTGATGCCTAAATATGCCCCCAAGGCAGCCAGTGCACGGACCGATTTGTAGTCTGCTCAATCTCTGTTGCACCTGAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR GCA 90 bp | GTGCAACAGAGATTGAGCAGACTACAAATCGGTCCGTGCACTGGCTaGCTTGGGGGCATATTTAGGCATCAGTTCATTTATCTTCCGGAT | + |
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Preference number: 1 (lower is better) Translates to: VQQRLSRLQIGPCTG*LGGIFRHQFIYLPD Trigger: ATCCGGAAGATAAATGAACTGATGCCTAAATATGCCCCCAAGGCAGCCAGTGCACGGACCGATTTGTAGTCTGCTCAATCTCTGTTGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR CCA 90 bp | CTGTCCTTCTTCTTAAGCTTCTCACAGATCTTCTCCACAGGGATGTaGTGGGCCAGAGGCTTTGATACCTCATTGATGATTTTGGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: LSFFLSFSQIFSTGM*WARGFDTSLMILVA Trigger: AGCCACCAAAATCATCAATGAGGTATCAAAGCCTCTGGCCCACCACATCCCTGTGGAGAAGATCTGTGAGAAGCTTAAGAAGAAGGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR GCA 90 bp | CTGGTAGTCAGATTCAGCCAGTGTAAACCCTGGACTCTTAACACATaGTCAGTCCAAGCTGACAGCCACCAAATGAATTTAAGTGTCACC | + |
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Preference number: 1 (lower is better) Translates to: LVVRFSQCKPWTLNT*SVQADSHQMNLSVT Trigger: GGTGACACTTAAATTCATTTGGTGGCTGTCAGCTTGGACTGAGCATGTGTTAAGAGTCCAGGGTTTACACTGGCTGAATCTGACTACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGGGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATCTACAAATCGGTCCGTaGACTGGCTGCCTTGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: WGYCRASIIRKAPGFTSDLQIGP*TGCLGG Trigger: GCCCCCAAGGCAGCCAGTGCACGGACCGATTTGTAG...ATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGGGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATAGCGGCATTTTTCGGTaGCCTGCCTGTACTGGTAGT | + |
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Preference number: 2 (lower is better) Translates to: WGYCRASIIRKAPGFTSDSGIFR*PACTGS Trigger: ACTACCAGTACAGGCAGGGCACCGAAAAATGCCGCT...ATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR-3UTR TCA 90 bp | CACTGGCCCACAGCGGCATTTTTCGGTGCCCTGCCTGTACTGGTAGTCAGATTCATGCTCAGTCCAAGCTaGCAGCCACCAAATGAATTT | + |
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Preference number: 2 (lower is better) Translates to: HWPTAAFFGALPVLVVRFMLSPS*QPPNEF Trigger: AAATTCATTTGGTGGCTGTCAGCTTGGACTGAGCAT...GAATCTGACTACCAGTACAGGCAGGGCACCGAAAAATGCCGCTGTGGGCCAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR-3UTR GCA 90 bp | GGGGGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATAGATGATTTTGGTGGCTaGATCATCTGTGGCCCCGAT | + |
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Preference number: 2 (lower is better) Translates to: GGTVGPASSGKLQASHLIDDFGG*IICGPD Trigger: ATCGGGGCCACAGATGATGCAGCCACCAAAATCATC...TATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATATGGCTGCATCATCTGTaGCCCCGATATAGTAGCACT | + |
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Preference number: 2 (lower is better) Translates to: GGTVGPASSGKLQASHLIWLHHL*PRYSST Trigger: AGTGCTACTATATCGGGGCCACAGATGATGCAGCCA...TATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR-3UTR CCA 90 bp | GCACTGGCTGCCTTGGGGGCATATTTAGGCATCAGTTCATTTATCTTCCGGATGTCCACAGGGATGTGGTaGGCCAGAGGCTTTGATACC | + |
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Preference number: 2 (lower is better) Translates to: ALAALGAYLGISSFIFRMSTGMW*ARGFDT Trigger: GGTATCAAAGCCTCTGGCCCACCACATCCCTGTGGA...CATCCGGAAGATAAATGAACTGATGCCTAAATATGCCCCCAAGGCAGCCAGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCTTTAACTCGGAGCTTCTTCAGGTCCACTGTGCTCAGGTCGATCTGCTTTGGACTCTTAACACATaGTCAGTCCAAGCTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: QLFNSELLQVHCAQVDLLWTLNT*SVQADS Trigger: GCTGTCAGCTTGGACTGAGCATGTGTTAAGAGTCCA...AAGCAGATCGACCTGAGCACAGTGGACCTGAAGAAGCTCCGAGTTAAAGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCTTTAACTCGGAGCTTCTTCAGGTCCACTGTGCTCAGGTCGATCTGCTTGTGGGCCAGAGGCTTTaGTACCTCATTGATGATTTT | + |
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Preference number: 2 (lower is better) Translates to: QLFNSELLQVHCAQVDLLVGQRL*YLIDDF Trigger: AAAATCATCAATGAGGTATCAAAGCCTCTGGCCCAC...AAGCAGATCGACCTGAGCACAGTGGACCTGAAGAAGCTCCGAGTTAAAGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR-3UTR TCA 90 bp | TACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGTAATCCCAGACACACTTTaGAGTCCTAGAGTACACCAG | + |
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Preference number: 2 (lower is better) Translates to: YCRASIIRKAPGFTSDTVIPDTL*SPRVHQ Trigger: CTGGTGTACTCTAGGACTTCAAAGTGTGTCTGGGAT...TACTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| 3UTR-3UTR CCA 90 bp | CAGAATCTTCTTCAGCTCTTTAACTCGGAGCTTCTTCAGGTCCACTGTGCTCAGAGCCAGTGTAAACCCTaGACTCTTAACACATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: QNLLQLFNSELLQVHCAQSQCKP*TLNTCS Trigger: TGAGCATGTGTTAAGAGTCCAGGGTTTACACTGGCT...CTGAGCACAGTGGACCTGAAGAAGCTCCGAGTTAAAGAGCTGAAGAAGATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR-3UTR CAA 90 bp | GGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGCGTGCACTGGCTGCCTaGGGGGCATATTTAGGCATC | + |
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Preference number: 3 (lower is better) Translates to: GTVGPASSGKLQASHLIQRALAA*GAYLGI Trigger: GATGCCTAAATATGCCCCCAAGGCAGCCAGTGCACG...CTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR GCA 72 bp | GATATAGTAGCACTGGCCCACAGCGGCATTTTTCGGTaGCCTGCCTGTACTGGTAGTCAGATTCAGCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: DIVALAHSGIFR*PACTGSQIQPV Trigger: CACTGGCTGAATCTGACTACCAGTACAGGCAGGGCACCGAAAAATGCCGCTGTGGGCCAGTGCTACTATATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR CCA 72 bp | GAGTACACCAGCAACAGAAGGAAGGGAATCCCCTCATaGGGGTACTGTAGGGCCAGCATCATCAGGAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: EYTSNRRKGIPS*GYCRASIIRKA Trigger: AGCTTTCCTGATGATGCTGGCCCTACAGTACCCCCATGAGGGGATTCCCTTCCTTCTGTTGCTGGTGTACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| 3UTR GCA 72 bp | GTGCAACAGAGATTGAGCAGACTACAAATCGGTCCGTaGACTGGCTGCCTTGGGGGCATATTTAGGCATCAG | + |
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Preference number: 3 (lower is better) Translates to: VQQRLSRLQIGP*TGCLGGIFRHQ Trigger: CTGATGCCTAAATATGCCCCCAAGGCAGCCAGTGCACGGACCGATTTGTAGTCTGCTCAATCTCTGTTGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR CCA 72 bp | CCTGTACTGGTAGTCAGATTCAGCCAGTGTAAACCCTaGACTCTTAACACATGCTCAGTCCAAGCTGACAGC | + |
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Preference number: 3 (lower is better) Translates to: PVLVVRFSQCKP*TLNTCSVQADS Trigger: GCTGTCAGCTTGGACTGAGCATGTGTTAAGAGTCCAGGGTTTACACTGGCTGAATCTGACTACCAGTACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR GCA 72 bp | AGATTGAGCAGACTACAAATCGGTCCGTGCACTGGCTaGCTTGGGGGCATATTTAGGCATCAGTTCATTTAT | + |
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Preference number: 3 (lower is better) Translates to: RLSRLQIGPCTG*LGGIFRHQFIY Trigger: ATAAATGAACTGATGCCTAAATATGCCCCCAAGGCAGCCAGTGCACGGACCGATTTGTAGTCTGCTCAATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR CCA 72 bp | TTCTTAAGCTTCTCACAGATCTTCTCCACAGGGATGTaGTGGGCCAGAGGCTTTGATACCTCATTGATGATT | + |
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Preference number: 3 (lower is better) Translates to: FLSFSQIFSTGM*WARGFDTSLMI Trigger: AATCATCAATGAGGTATCAAAGCCTCTGGCCCACCACATCCCTGTGGAGAAGATCTGTGAGAAGCTTAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| 3UTR GCA 72 bp | AGATTCAGCCAGTGTAAACCCTGGACTCTTAACACATaGTCAGTCCAAGCTGACAGCCACCAAATGAATTTA | + |
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Preference number: 3 (lower is better) Translates to: RFSQCKPWTLNT*SVQADSHQMNL Trigger: TAAATTCATTTGGTGGCTGTCAGCTTGGACTGAGCATGTGTTAAGAGTCCAGGGTTTACACTGGCTGAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| CDS-3UTR CCA 90 bp | AGAAGGAAGGGAATCCCCTCATGGGGGTACTGTAGGGCCAGCATCATCAGGAAACCGCCAGCCCCTGCGTaGCCCACATCCTCCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: RRKGIPSWGYCRASIIRKPPAPA*PTSSSS Trigger: GGATGAGGAGGATGTGGGCCACGCAGGGGCTGGCGG...TTTCCTGATGATGCTGGCCCTACAGTACCCCCATGAGGGGATTCCCTTCCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| CDS-3UTR GCA 90 bp | CCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGTATTGTCAGGAGGCCACCGCCAGCCCCTaGGTGGCCCACATCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PASSGKLQASHLIQYCQEATASP*VAHILL Trigger: GAGGAGGATGTGGGCCACGCAGGGGCTGGCGGTGGC...CTCCTGACAATACTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| CDS-3UTR CCA 90 bp | CGATATAGTAGCACTGGCCCACAGCGGCATTTTTCGGTGCCCTGCCTGTACTGGAATCGGTCCGTGCACTaGCTGCCTTGGGGGCATATT | + |
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Preference number: 4 (lower is better) Translates to: RYSSTGPQRHFSVPCLYWNRSVH*LPWGHI Trigger: AATATGCCCCCAAGGCAGCCAGTGCACGGACCGATT...CCAGTACAGGCAGGGCACCGAAAAATGCCGCTGTGGGCCAGTGCTACTATATCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| CDS-3UTR CCA 90 bp | AGCAACAGAAGGAAGGGAATCCCCTCATGGGGGTACTGTAGGGCCAGCATCATCTCCACAGGGATGTGGTaGGCCAGAGGCTTTGATACC | + |
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Preference number: 4 (lower is better) Translates to: SNRRKGIPSWGYCRASIISTGMW*ARGFDT Trigger: GGTATCAAAGCCTCTGGCCCACCACATCCCTGTGGA...GATGATGCTGGCCCTACAGTACCCCCATGAGGGGATTCCCTTCCTTCTGTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| CDS-3UTR GCA 90 bp | CAGCTCTTTAACTCGGAGCTTCTTCAGGTCCACTGTGCTCAGGTCGATCTGCTTGGTCCGTGCACTGGCTaGCTTGGGGGCATATTTAGG | + |
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Preference number: 4 (lower is better) Translates to: QLFNSELLQVHCAQVDLLGPCTG*LGGIFR Trigger: CCTAAATATGCCCCCAAGGCAGCCAGTGCACGGACC...AAGCAGATCGACCTGAGCACAGTGGACCTGAAGAAGCTCCGAGTTAAAGAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| CDS-3UTR CCA 90 bp | CACTGGCCCACAGCGGCATTTTTCGGTGCCCTGCCTGTACTGGTAGTCAGATTCTGGCTGCATCATCTGTaGCCCCGATATAGTAGCACT | + |
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Preference number: 4 (lower is better) Translates to: HWPTAAFFGALPVLVVRFWLHHL*PRYSST Trigger: AGTGCTACTATATCGGGGCCACAGATGATGCAGCCA...GAATCTGACTACCAGTACAGGCAGGGCACCGAAAAATGCCGCTGTGGGCCAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| CDS-3UTR CCA 90 bp | GGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGAAGGGAATCCCCTCATaGGGGTACTGTAGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GTVGPASSGKLQASHLIQKGIPS*GYCRAS Trigger: GCTGGCCCTACAGTACCCCCATGAGGGGATTCCCTT...CTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| 3UTR CAA 72 bp | ACAGGGATGTGGTGGGCCAGAGGCTTTGATACCTCATaGATGATTTTGGTGGCTGCATCATCTGTGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: TGMWWARGFDTS*MILVAASSVAP Trigger: CGGGGCCACAGATGATGCAGCCACCAAAATCATCAATGAGGTATCAAAGCCTCTGGCCCACCACATCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| CDS-3UTR GCA 90 bp | TCAGATTCAGCCAGTGTAAACCCTGGACTCTTAACACATGCTCAGTCCAAGCTGCTACAAATCGGTCCGTaGACTGGCTGCCTTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SDSASVNPGLLTHAQSKLLQIGP*TGCLGG Trigger: GCCCCCAAGGCAGCCAGTGCACGGACCGATTTGTAG...CAGCTTGGACTGAGCATGTGTTAAGAGTCCAGGGTTTACACTGGCTGAATCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| CDS-3UTR TCA 90 bp | CACTGGCCCACAGCGGCATTTTTCGGTGCCCTGCCTGTACTGGTAGTCAGATTCTTCAATAGTGGCTGGTaGGAATGTGACATCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: HWPTAAFFGALPVLVVRFFNSGW*ECDISV Trigger: GACAGAGATGTCACATTCTCACCAGCCACTATTGAA...GAATCTGACTACCAGTACAGGCAGGGCACCGAAAAATGCCGCTGTGGGCCAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| CDS-3UTR TCA 90 bp | AGGGAATCCCCTCATGGGGGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGTTCAATAGTGGCTGGTaGGAATGTGACATCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: RESPHGGTVGPASSGKLQFNSGW*ECDISV Trigger: GACAGAGATGTCACATTCTCACCAGCCACTATTGAA...CTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACCCCCATGAGGGGATTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| CDS-3UTR TCA 90 bp | GGTGCAACAGAGATTGAGCAGACTACAAATCGGTCCGTGCACTGGCTGCCTTGGTCCAGGCTTCACATCTaGTACAGTATTGTCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GATEIEQTTNRSVHWLPWSRLHI*YSIVRS Trigger: GCTCCTGACAATACTGTATCAGATGTGAAGCCTGGA...CCAAGGCAGCCAGTGCACGGACCGATTTGTAGTCTGCTCAATCTCTGTTGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| CDS-3UTR GCA 90 bp | AGAAGGAAGGGAATCCCCTCATGGGGGTACTGTAGGGCCAGCATCATCAGGAAAGATGATTTTGGTGGCTaGATCATCTGTGGCCCCGAT | + |
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Preference number: 4 (lower is better) Translates to: RRKGIPSWGYCRASIIRKDDFGG*IICGPD Trigger: ATCGGGGCCACAGATGATGCAGCCACCAAAATCATC...TTTCCTGATGATGCTGGCCCTACAGTACCCCCATGAGGGGATTCCCTTCCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| CDS-3UTR GCA 90 bp | CACTGGCCCACAGCGGCATTTTTCGGTGCCCTGCCTGTACTGGTAGTCAGATTCGTAGTCAGACTTTTCTaGACAGCCTTTGCATGTCTC | + |
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Preference number: 4 (lower is better) Translates to: HWPTAAFFGALPVLVVRFVVRLF*TAFACL Trigger: GAGACATGCAAAGGCTGTGCAGAAAAGTCTGACTAC...GAATCTGACTACCAGTACAGGCAGGGCACCGAAAAATGCCGCTGTGGGCCAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| CDS-3UTR GCA 90 bp | GGGGGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATAACAACCGATTCTCTTTaGCTCTTGCTTCCCGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GGTVGPASSGKLQASHLITTDSL*LLLPGR Trigger: TCTGCCGGGAAGCAAGAGGCAAAGAGAATCGGTTGT...TATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| CDS-3UTR CCA 90 bp | CACTGGCCCACAGCGGCATTTTTCGGTGCCCTGCCTGTACTGGTAGTCAGATTCAGCCAGTGTAAACCCTaGACTCTTAACACATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: HWPTAAFFGALPVLVVRFSQCKP*TLNTCS Trigger: TGAGCATGTGTTAAGAGTCCAGGGTTTACACTGGCT...GAATCTGACTACCAGTACAGGCAGGGCACCGAAAAATGCCGCTGTGGGCCAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| CDS-3UTR TCA 90 bp | AGCAACAGAAGGAAGGGAATCCCCTCATGGGGGTACTGTAGGGCCAGCATCATCGTGGGCCAGAGGCTTTaGTACCTCATTGATGATTTT | + |
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Preference number: 4 (lower is better) Translates to: SNRRKGIPSWGYCRASIIVGQRL*YLIDDF Trigger: AAAATCATCAATGAGGTATCAAAGCCTCTGGCCCAC...GATGATGCTGGCCCTACAGTACCCCCATGAGGGGATTCCCTTCCTTCTGTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| CDS-3UTR TCA 90 bp | TGGGGGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATATCCCAGACACACTTTaGAGTCCTAGAGTACACCAG | + |
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Preference number: 4 (lower is better) Translates to: WGYCRASIIRKAPGFTSDIPDTL*SPRVHQ Trigger: CTGGTGTACTCTAGGACTTCAAAGTGTGTCTGGGAT...ATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| CDS-3UTR GCA 90 bp | GCACTGGCTGCCTTGGGGGCATATTTAGGCATCAGTTCATTTATCTTCCGGATGCCAACCGATTCTCTTTaGCTCTTGCTTCCCGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: ALAALGAYLGISSFIFRMPTDSL*LLLPGR Trigger: TCTGCCGGGAAGCAAGAGGCAAAGAGAATCGGTTGG...CATCCGGAAGATAAATGAACTGATGCCTAAATATGCCCCCAAGGCAGCCAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| CDS-3UTR GCA 90 bp | TTTTTCGGTGCCCTGCCTGTACTGGTAGTCAGATTCAGCCAGTGTAAACCCTGGTCTTCAGGTCCACTGTaGTCAGGTCGATCTGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: FFGALPVLVVRFSQCKPWSSGPL*SGRSAC Trigger: ACAAGCAGATCGACCTGAGCACAGTGGACCTGAAGA...CCAGGGTTTACACTGGCTGAATCTGACTACCAGTACAGGCAGGGCACCGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
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| CDS-3UTR GCA 90 bp | AGCAACAGAAGGAAGGGAATCCCCTCATGGGGGTACTGTAGGGCCAGCATCATCGTAGTCAGACTTTTCTaGACAGCCTTTGCATGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SNRRKGIPSWGYCRASIIVVRLF*TAFACL Trigger: GAGACATGCAAAGGCTGTGCAGAAAAGTCTGACTAC...GATGATGCTGGCCCTACAGTACCCCCATGAGGGGATTCCCTTCCTTCTGTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000528157.7 |
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| CDS-3UTR GCA 90 bp | AGGAAAGCTCCAGGCTTCACATCTGATACAGTATTGTCAGGAGCCCACTTAAAACTACAAATCGGTCCGTaGACTGGCTGCCTTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RKAPGFTSDTVLSGAHLKLQIGP*TGCLGG Trigger: GCCCCCAAGGCAGCCAGTGCACGGACCGATTTGTAG...TTTTAAGTGGGCTCCTGACAATACTGTATCAGATGTGAAGCCTGGAGCTTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
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| CDS-3UTR GCA 90 bp | AGGTCCACTGTGCTCAGGTCGATCTGCTTGTCATACTTAAGCTCACATATCTGGAGCGGCATTTTTCGGTaGCCTGCCTGTACTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSTVLRSICLSYLSSHIWSGIFR*PACTGS Trigger: ACTACCAGTACAGGCAGGGCACCGAAAAATGCCGCT...CCAGATATGTGAGCTTAAGTATGACAAGCAGATCGACCTGAGCACAGTGGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGCTCCAGGCTTCACATCTGATACAGTATTGTCAGGAGCCCACTTAAAAGGTCCGTGCACTGGCTaGCTTGGGGGCATATTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKAPGFTSDTVLSGAHLKGPCTG*LGGIFR Trigger: CCTAAATATGCCCCCAAGGCAGCCAGTGCACGGACC...TTTTAAGTGGGCTCCTGACAATACTGTATCAGATGTGAAGCCTGGAGCTTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS-3UTR CCA 90 bp | ACTGGCTGCCTTGGGGGCATATTTAGGCATCAGTTCATTTATCTTCCGGATGTATCCACAGGGATGTGGTaGGCCAGAGGCTTTGATACC | + |
|
Preference number: 4 (lower is better) Translates to: TGCLGGIFRHQFIYLPDVSTGMW*ARGFDT Trigger: GGTATCAAAGCCTCTGGCCCACCACATCCCTGTGGA...TACATCCGGAAGATAAATGAACTGATGCCTAAATATGCCCCCAAGGCAGCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
||
| CDS-3UTR TCA 90 bp | GGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGGTGGGCCAGAGGCTTTaGTACCTCATTGATGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTVGPASSGKLQASHLIQVGQRL*YLIDDF Trigger: AAAATCATCAATGAGGTATCAAAGCCTCTGGCCCAC...CTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS-3UTR TCA 90 bp | GCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGTATTGTCAGGAGCCCTCCAGGCTTCACATCTaGTACAGTATTGTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSGKLQASHLIQYCQEPSRLHI*YSIVRS Trigger: GCTCCTGACAATACTGTATCAGATGTGAAGCCTGGA...GGGCTCCTGACAATACTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS-3UTR GCA 90 bp | GCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGTATTGTCAGGAGCCCTGGACTCTTAACACATaGTCAGTCCAAGCTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSGKLQASHLIQYCQEPWTLNT*SVQADS Trigger: GCTGTCAGCTTGGACTGAGCATGTGTTAAGAGTCCA...GGGCTCCTGACAATACTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
||
| CDS-3UTR GCA 90 bp | TCAGATTCAGCCAGTGTAAACCCTGGACTCTTAACACATGCTCAGTCCAAGCTGGATGATTTTGGTGGCTaGATCATCTGTGGCCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SDSASVNPGLLTHAQSKLDDFGG*IICGPD Trigger: ATCGGGGCCACAGATGATGCAGCCACCAAAATCATC...CAGCTTGGACTGAGCATGTGTTAAGAGTCCAGGGTTTACACTGGCTGAATCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446668.5 |
||
| CDS-3UTR GCA 90 bp | TACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGTATCTTCAGGTCCACTGTaGTCAGGTCGATCTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YCRASIIRKAPGFTSDTVSSGPL*SGRSAC Trigger: ACAAGCAGATCGACCTGAGCACAGTGGACCTGAAGA...TACTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS-3UTR CCA 90 bp | ACTGGCTGCCTTGGGGGCATATTTAGGCATCAGTTCATTTATCTTCCGGATGTATTCTCCACAGGGATGTaGTGGGCCAGAGGCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGCLGGIFRHQFIYLPDVFSTGM*WARGFD Trigger: ATCAAAGCCTCTGGCCCACCACATCCCTGTGGAGAA...TACATCCGGAAGATAAATGAACTGATGCCTAAATATGCCCCCAAGGCAGCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCTCCAGGCTTCACATCTGATACAGTATTGTCAGGAGCCCACTTAAAAAATCGGTCCGTGCACTaGCTGCCTTGGGGGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: RKAPGFTSDTVLSGAHLKNRSVH*LPWGHI Trigger: AATATGCCCCCAAGGCAGCCAGTGCACGGACCGATT...TTTTAAGTGGGCTCCTGACAATACTGTATCAGATGTGAAGCCTGGAGCTTTCCT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS-3UTR CCA 90 bp | TACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGTATGGCTGCATCATCTGTaGCCCCGATATAGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: YCRASIIRKAPGFTSDTVWLHHL*PRYSST Trigger: TGTGCTACTATATCGGGGCCACAGATGATGCAGCCA...TACTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528157.7 |
||
| CDS-3UTR TCA 90 bp | AAATCGGTCCGTGCACTGGCTGCCTTGGGGGCATATTTAGGCATCAGTTCATTTATGCTCAGTCCAAGCTaGCAGCCACCAAATGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: KSVRALAALGAYLGISSFMLSPS*QPPNEF Trigger: AAATTCATTTGGTGGCTGTCAGCTTGGACTGAGCAT...AAATGAACTGATGCCTAAATATGCCCCCAAGGCAGCCAGTGCACGGACCGATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
||
| CDS-3UTR GCA 90 bp | CTCTTTAACTCGGAGCTTCTTCAGGTCCACTGTGCTCAGGTCGATCTGCTTGTCATTCTCTTTGCCTCTTaGTTCCCGGCAGAACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LFNSELLQVHCAQVDLLVILFAS*FPAELY Trigger: ATAAAGTTCTGCCGGGAAGCAAGAGGCAAAGAGAAT...GACAAGCAGATCGACCTGAGCACAGTGGACCTGAAGAAGCTCCGAGTTAAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
||
| CDS-3UTR GCA 90 bp | CCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGTATTGTCAGGAGATTCTCTTTGCCTCTTaGTTCCCGGCAGAACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PASSGKLQASHLIQYCQEILFAS*FPAELY Trigger: ATAAAGTTCTGCCGGGAAGCAAGAGGCAAAGAGAAT...CTCCTGACAATACTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS GCA 90 bp | CGGCTGCCCGGCAGCACGCTCAGAGCCAGCGCCACCGCCAGCCCCTaGGTGGCCCACATCCTCCTCATCCTCCTCATCCTCCTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLPGSTLRASATASP*VAHILLILLILLLL Trigger: GAGGAGGAGGAGGATGAGGAGGATGAGGAGGATGTGGGCCACGCAGGGGCTGGCGGTGGCGCTGGCTCTGAGCGTGCTGCCGGGCAGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528157.7 |
||
| CDS CCA 90 bp | TGCCCGGCAGCACGCTCAGAGCCAGCGCCACCGCCAGCCCCTGCGTaGCCCACATCCTCCTCATCCTCCTCATCCTCCTCCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPAARSEPAPPPAPA*PTSSSSSSSSSSSS Trigger: GGAGGAGGAGGAGGAGGATGAGGAGGATGAGGAGGATGTGGGCCACGCAGGGGCTGGCGGTGGCGCTGGCTCTGAGCGTGCTGCCGGGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528157.7 |
||
| CDS GCA 90 bp | CAAAATGCTGCTGCTAATTTCCAAATACAACAGCGGACCCAGAGGTaGAGCTTCGTGATCCCAACAGACAGGGCGCAGCACCCACGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QNAAANFQIQQRTQR*SFVIPTDRAQHPRP Trigger: TGGCCGTGGGTGCTGCGCCCTGTCTGTTGGGATCACGAAGCTGCACCTCTGGGTCCGCTGTTGTATTTGGAAATTAGCAGCAGCATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470900.1 |
||
| CDS GCA 90 bp | TGCCTATCCTGTAGGCACCCTGTCACCTTCTCCTGTCCACATACATaGCACACTCTTTCAGGCCTCTGGGCACTCACACTGCTGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CLSCRHPVTFSCPHT*HTLSGLWALTLLFP Trigger: AGGGAACAGCAGTGTGAGTGCCCAGAGGCCTGAAAGAGTGTGGCATGTATGTGGACAGGAGAAGGTGACAGGGTGCCTACAGGATAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649711.1 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGGAAGGGAATCCCCTCATGGGGGTACTGTAGGGCCAGCATCATCAGGACACAACCGATTCTCTTaGCCTCTTGCTTCCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TEGRESPHGGTVGPASSGHNRFS*PLASRQ Trigger: CTGCCGGGAAGCAAGAGGCAAAGAGAATCGGTTGTG...TCCTGATGATGCTGGCCCTACAGTACCCCCATGAGGGGATTCCCTTCCTTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528157.7 |
||
| CDS CCA 90 bp | GTCACCTTCTCCTGTCCACATACATGCCACACTCTTTCAGGCCTCTaGGCACTCACACTGCTGTTCCCTGTATGGGATGGTCTTACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VTFSCPHTCHTLSGL*ALTLLFPVWDGLTP Trigger: TGGGGTAAGACCATCCCATACAGGGAACAGCAGTGTGAGTGCCCAGAGGCCTGAAAGAGTGTGGCATGTATGTGGACAGGAGAAGGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649711.1 |
||
| CDS-3UTR CAA 90 bp | AGGGAATCCCCTCATGGGGGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGATTCTCTTTGCCTCTaGCTTCCCGGCAGAACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RESPHGGTVGPASSGKLQDSLCL*LPGRTL Trigger: TAAAGTTCTGCCGGGAAGCAAGAGGCAAAGAGAATC...CTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACCCCCATGAGGGGATTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528157.7 |
||
| CDS-3UTR CAA 90 bp | GGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGACCAACCGATTCTCTTaGCCTCTTGCTTCCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTVGPASSGKLQASHLIQTNRFS*PLASRQ Trigger: CTGCCGGGAAGCAAGAGGCAAAGAGAATCGGTTGGT...CTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
||
| CDS-3UTR CAA 90 bp | TTAACTCGGAGCTTCTTCAGGTCCACTGTGCTCAGGTCGATCTGCTTGTCATACCGTGCACTGGCTGCCTaGGGGGCATATTTAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LTRSFFRSTVLRSICLSYRALAA*GAYLGI Trigger: GATGCCTAAATATGCCCCCAAGGCAGCCAGTGCACG...GTATGACAAGCAGATCGACCTGAGCACAGTGGACCTGAAGAAGCTCCGAGTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
||
| CDS-3UTR CAA 90 bp | TACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGTACGTGCACTGGCTGCCTaGGGGGCATATTTAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: YCRASIIRKAPGFTSDTVRALAA*GAYLGI Trigger: GATGCCTAAATATGCCCCCAAGGCAGCCAGTGCACG...TACTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS GCA 90 bp | GTCCACATACATGCCACACTCTTTCAGGCCTCTGGGCACTCACACTaGTGTTCCCTGTATGGGATGGTCTTACCCCACTTCAATGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: VHIHATLFQASGHSH*CSLYGMVLPHFNDN Trigger: GTTATCATTGAAGTGGGGTAAGACCATCCCATACAGGGAACAGCAGTGTGAGTGCCCAGAGGCCTGAAAGAGTGTGGCATGTATGTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649711.1 |
||
| CDS TCA 90 bp | CCTGCTCCTTTCATCAAGTTTAAGCCCATGGTGAACACGTGTCCTTaGGACGGGACTCACTGTGACCTCATAAATGGAGAGACTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAPFIKFKPMVNTCP*DGTHCDLINGETGR Trigger: CCTTCCAGTCTCTCCATTTATGAGGTCACAGTGAGTCCCGTCTCAAGGACACGTGTTCACCATGGGCTTAAACTTGATGAAAGGAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470900.1 |
||
| CDS TCA 90 bp | GTCCCCTGGTACACCCAGGGCATCAAAGGACCAAGCATCACCCAATaGCCTATAAACGACTTCTCCCTGCTCCTTTCATCAAGTTTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPWYTQGIKGPSITQ*PINDFSLLLSSSLS Trigger: GCTTAAACTTGATGAAAGGAGCAGGGAGAAGTCGTTTATAGGTCATTGGGTGATGCTTGGTCCTTTGATGCCCTGGGTGTACCAGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470900.1 |
||
| CDS-3UTR CAA 90 bp | GGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGGATTCTCTTTGCCTCTaGCTTCCCGGCAGAACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GTVGPASSGKLQASHLIQDSLCL*LPGRTL Trigger: TAAAGTTCTGCCGGGAAGCAAGAGGCAAAGAGAATC...CTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS-3UTR CAA 90 bp | AGAAGGAAGGGAATCCCCTCATGGGGGTACTGTAGGGCCAGCATCATCAGGAAAACCTCATTGATGATTTaGGTGGCTGCATCATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RRKGIPSWGYCRASIIRKTSLMI*VAASSV Trigger: CACAGATGATGCAGCCACCAAAATCATCAATGAGGT...TTTCCTGATGATGCTGGCCCTACAGTACCCCCATGAGGGGATTCCCTTCCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000528157.7 |
||
| CDS-3UTR CAA 90 bp | TGGGGGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATGGCTTTGATACCTCATaGATGATTTTGGTGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WGYCRASIIRKAPGFTSDGFDTS*MILVAA Trigger: TGCAGCCACCAAAATCATCAATGAGGTATCAAAGCC...ATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS-3UTR CAA 90 bp | CAGCTCTTTAACTCGGAGCTTCTTCAGGTCCACTGTGCTCAGGTCGATCTGCTTCAGGTGCAACAGAGATaGAGCAGACTACAAATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: QLFNSELLQVHCAQVDLLQVQQR*SRLQIG Trigger: ACCGATTTGTAGTCTGCTCAATCTCTGTTGCACCTG...AAGCAGATCGACCTGAGCACAGTGGACCTGAAGAAGCTCCGAGTTAAAGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
||
| CDS-3UTR CAA 90 bp | GGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGCAGGTGCAACAGAGATaGAGCAGACTACAAATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTVGPASSGKLQASHLIQQVQQR*SRLQIG Trigger: ACCGATTTGTAGTCTGCTCAATCTCTGTTGCACCTG...CTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS-3UTR CAA 90 bp | GGTACTGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGACCTCATTGATGATTTaGGTGGCTGCATCATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GTVGPASSGKLQASHLIQTSLMI*VAASSV Trigger: CACAGATGATGCAGCCACCAAAATCATCAATGAGGT...CTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACAGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS-3UTR CAA 90 bp | GCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGTATTGTCAGGAGCCCGGCTTTGATACCTCATaGATGATTTTGGTGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSGKLQASHLIQYCQEPGFDTS*MILVAA Trigger: TGCAGCCACCAAAATCATCAATGAGGTATCAAAGCC...GGGCTCCTGACAATACTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS CCA 90 bp | GTCTTTGAGGTCCTGGTAAAATCTTCCCAGATAAGAAATACAAACTaGAAAAGAGAGGGACGGGAGATGCTCAGCAATCACCAAGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VFEVLVKSSQIRNTN*KREGREMLSNHQAV Trigger: AACAGCTTGGTGATTGCTGAGCATCTCCCGTCCCTCTCTTTTCCAGTTTGTATTTCTTATCTGGGAAGATTTTACCAGGACCTCAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470900.1 |
||
| CDS-3UTR CAA 90 bp | TGTAGGGCCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGTATTGACATCTGATACAGTATaGTCAGGAGCCCACTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CRASIIRKAPGFTSDTVLTSDTV*SGAHLK Trigger: TTTTAAGTGGGCTCCTGACAATACTGTATCAGATGT...CAATACTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGGCCCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446668.5 ENST00000528157.7 |
||
| CDS-3UTR CAA 90 bp | CCAGCATCATCAGGAAAGCTCCAGGCTTCACATCTGATACAGTATTGTCAGGAGGGGCAAAACCCCATTTaGGTATTCACTATAATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PASSGKLQASHLIQYCQEGQNPI*VFTIIL Trigger: CAGAATTATAGTGAATACCAAAATGGGGTTTTGCCC...CTCCTGACAATACTGTATCAGATGTGAAGCCTGGAGCTTTCCTGATGATGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000528157.7 |
||
| CDS-3UTR CAA 90 bp | CTTGGGGGCATATTTAGGCATCAGTTCATTTATCTTCCGGATGTAGTCAGACTTACATCTGATACAGTATaGTCAGGAGCCCACTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LGGIFRHQFIYLPDVVRLTSDTV*SGAHLK Trigger: TTTTAAGTGGGCTCCTGACAATACTGTATCAGATGT...AAGTCTGACTACATCCGGAAGATAAATGAACTGATGCCTAAATATGCCCCCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446668.5 |
||
| CDS CAA 72 bp | CGCCCTCGCCCTCTTGGCCCCGGCCGTCTGGTGATGTaGTGGGGTTCAGCGCCGCCGCCAGAACGGTCACGG | + |
|
Preference number: 6 (lower is better) Translates to: RPRPLGPGRLVM*WGSAPPPERSR Trigger: CCGTGACCGTTCTGGCGGCGGCGCTGAACCCCACAACATCACCAGACGGCCGGGGCCAAGAGGGCGAGGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470900.1 |
||
| CDS CCA 72 bp | TCCCAACAGACAGGGCGCAGCACCCACGGCCAGCCCTaGAGCTCCCGACGCCGAACGGGGAGCGGTAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: SQQTGRSTHGQP*SSRRRTGSGNL Trigger: GAGGTTACCGCTCCCCGTTCGGCGTCGGGAGCTCCAGGGCTGGCCGTGGGTGCTGCGCCCTGTCTGTTGGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470900.1 |
||
| CDS CCA 72 bp | GTAGACAGAACCCGGTTCCAAGTGGCGGGGGTCCCCTaGTACACCCAGGGCATCAAAGGACCAAGCATCACC | + |
|
Preference number: 6 (lower is better) Translates to: VDRTRFQVAGVP*YTQGIKGPSIT Trigger: GGTGATGCTTGGTCCTTTGATGCCCTGGGTGTACCAGGGGACCCCCGCCACTTGGAACCGGGTTCTGTCTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470900.1 |
||
| CDS CCA 72 bp | TCCTGTCCACATACATGCCACACTCTTTCAGGCCTCTaGGCACTCACACTGCTGTTCCCTGTATGGGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: SCPHTCHTLSGL*ALTLLFPVWDG Trigger: ACCATCCCATACAGGGAACAGCAGTGTGAGTGCCCAGAGGCCTGAAAGAGTGTGGCATGTATGTGGACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649711.1 |
||
| CDS TCA 72 bp | TTCTCCCTGCTCCTTTCATCAAGTTTAAGCCCATGGTaGACACGTGTCCTTGAGACGGGACTCACTGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: FSLLLSSSLSPW*TRVLETGLTVT Trigger: GGTCACAGTGAGTCCCGTCTCAAGGACACGTGTTCACCATGGGCTTAAACTTGATGAAAGGAGCAGGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470900.1 |
||
| CDS TCA 72 bp | TACACCCAGGGCATCAAAGGACCAAGCATCACCCAATaGCCTATAAACGACTTCTCCCTGCTCCTTTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: YTQGIKGPSITQ*PINDFSLLLSS Trigger: TGATGAAAGGAGCAGGGAGAAGTCGTTTATAGGTCATTGGGTGATGCTTGGTCCTTTGATGCCCTGGGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470900.1 |
||
| CDS TCA 72 bp | TTCATCAAGTTTAAGCCCATGGTGAACACGTGTCCTTaGGACGGGACTCACTGTGACCTCATAAATGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FIKFKPMVNTCP*DGTHCDLINGE Trigger: CTCTCCATTTATGAGGTCACAGTGAGTCCCGTCTCAAGGACACGTGTTCACCATGGGCTTAAACTTGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470900.1 |
||
| CDS CAA 72 bp | TTAAGTGTCACCAGGGTTCAAACCAACCGATTCTCTTaGCCTCTTGCTTCCCGGCAGAACTTTATAAGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LSVTRVQTNRFS*PLASRQNFISS Trigger: CGAACTTATAAAGTTCTGCCGGGAAGCAAGAGGCAAAGAGAATCGGTTGGTTTGAACCCTGGTGACACTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446668.5 |
||
| CDS GCA 72 bp | CCCGATATAGTAGCACAACCGATTCTCTTTGCCTCTTaGTTCCCGGCAGAACTTTATAAGTTCGTTTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: PDIVAQPILFAS*FPAELYKFVFN Trigger: ATTGAAAACGAACTTATAAAGTTCTGCCGGGAAGCAAGAGGCAAAGAGAATCGGTTGTGCTACTATATCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000470900.1 ENST00000528157.7 |
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