Pregenerated sensors for MANEA (Homo sapiens)
Ensembl gene IDs: ENSG00000172469Ensembl transcript IDs: ENST00000358812.9, ENST00000369293.5, ENST00000369293.6, ENST00000474553.1, ENST00000682076.1, ENST00000682417.1, ENST00000682663.1, ENST00000683151.1, ENST00000683172.1, ENST00000684164.1, ENST00000684211.1, ENST00000684753.1
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTACTCTGAAATCTGTTACTGCTGGCTGGTTAGGGTAATGTGTTaGGGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGAT | + |
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Preference number: 1 (lower is better) Translates to: SYSEICYCWLVRVMC*GITTKLRDEVCCVD Trigger: ATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCCTCAACACATTACCCTAACCAGCCAGCAGTAACAGATTTCAGAGTAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| 3UTR-3UTR TCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAGGTTCACAGCAAAATTaGGAGGAAGGTACAGTGATT | + |
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Preference number: 2 (lower is better) Translates to: GITTKLRDEVCCVDSPCLGSQQN*EEGTVI Trigger: AATCACTGTACCTTCCTCTCAATTTTGCTGTGAACC...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| 3UTR-3UTR TCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAGGCCTGATCATTCTCTaGGAAATGGCAAATTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: GITTKLRDEVCCVDSPCLGLIIL*EMANSK Trigger: TTTGGAATTTGCCATTTCTCAGAGAATGATCAGGCC...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| 3UTR-3UTR TCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAACACAACGTACACAATaGCAAAAACTCCTCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GITTKLRDEVCCVDSPCLTQRTQ*QKLLCG Trigger: ACCACAGAGGAGTTTTTGTCATTGTGTACGTTGTGT...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| 3UTR-3UTR TCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGGTTAGGGTAATGTGTTaGGGAATCACAACAAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: IQEDVHRLYATTMPVYIRVRVMC*GITTKL Trigger: GAGCTTTGTTGTGATTCCTCAACACATTACCCTAAC...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| 3UTR-3UTR CCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAAGAAAATCCACAGGTTaGATCTATATAGTGATTACC | + |
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Preference number: 2 (lower is better) Translates to: GITTKLRDEVCCVDSPCLRKSTG*IYIVIT Trigger: GGTAATCACTATATAGATCCAACCTGTGGATTTTCT...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| 3UTR-3UTR TCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGTGGTGGTATCTGTGTTaGGAATATGCTAACCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: IQEDVHRLYATTMPVYIRWWYLC*EYANLV Trigger: AACAAGGTTAGCATATTCTCAACACAGATACCACCA...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| 3UTR-3UTR CCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGTACTTTCTGTCATGGTaGGTTCAAATACACAACGTA | + |
|
Preference number: 2 (lower is better) Translates to: IQEDVHRLYATTMPVYIRYFLSW*VQIHNV Trigger: TACGTTGTGTATTTGAACCCACCATGACAGAAAGTA...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| 3UTR-3UTR CAA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAAGGTTCACAGCAAAATaGAGAGGAAGGTACAGTGAT | + |
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Preference number: 3 (lower is better) Translates to: GITTKLRDEVCCVDSPCLRFTAK*RGRYSD Trigger: ATCACTGTACCTTCCTCTCAATTTTGCTGTGAACCT...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| 3UTR TCA 72 bp | TCTGTCATGGTGGGTTCAAATACACAACGTACACAATaGCAAAAACTCCTCTGTGGTAGATACTTCTCTAAC | + |
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Preference number: 3 (lower is better) Translates to: SVMVGSNTQRTQ*QKLLCGRYFSN Trigger: GTTAGAGAAGTATCTACCACAGAGGAGTTTTTGTCATTGTGTACGTTGTGTATTTGAACCCACCATGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| 3UTR TCA 72 bp | TATATGCAACTACTATGCCAGTTTATATCAGGGACTTaGGCATCTGCAGATTTTGGTATCTATAGGGGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: YMQLLCQFISGT*ASADFGIYRGN Trigger: GTTACCCCTATAGATACCAAAATCTGCAGATGCTCAAGTCCCTGATATAAACTGGCATAGTAGTTGCATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| 3UTR TCA 72 bp | CTTGATTGGGGTGGTATTCAAACAGGTATATACTTTTaGGTAACATCAATGAGCTATAAACTTAAAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LDWGGIQTGIYF*VTSMSYKLKVG Trigger: TCCCACTTTAAGTTTATAGCTCATTGATGTTACTCAAAAGTATATACCTGTTTGAATACCACCCCAATCAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369293.5 |
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| CDS-3UTR GCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAGGGGCGTGTCTGAAGTaGGGCACTCAGACCAATTTC | + |
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Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLGACLK*GTQTNF Trigger: GAAATTGGTCTGAGTGCCGCACTTCAGACACGCCCC...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR TCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGAAGCTGGGGCGTGTCTaGAGTGCGGCACTCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: IQEDVHRLYATTMPVYIRKLGRV*SAALRP Trigger: TGGTCTGAGTGCCGCACTTCAGACACGCCCCAGCTT...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAGGAGCCAATGTCATCTaGAGGGTTGTGTCTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLGANVI*RVVSPL Trigger: CAAGGGAGACACAACCCTCCAGATGACATTGGCTCC...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTATCCGAGACCCTGAGGTaGTTAACAGATTGGCCCATT | + |
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Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLSETLR*LTDWPI Trigger: AATGGGCCAATCTGTTAACCACCTCAGGGTCTCGGA...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR TCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTATCATGTGAGTTTCTATaGCAGAAGGATCCCGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLSCEFL*QKDPEN Trigger: GTTCTCGGGATCCTTCTGTCATAGAAACTCACATGA...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR GCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTACATCATAAGGAGAATTaGGAATACTCCGAGACCCTG | + |
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Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLHHKEN*EYSETL Trigger: CAGGGTCTCGGAGTATTCGCAATTCTCCTTATGATG...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR GCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGCGGTTCCGAGTGTTTTaGGTGTTCCATGGACGGATG | + |
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Preference number: 4 (lower is better) Translates to: IQEDVHRLYATTMPVYIRRFRVF*VFHGRM Trigger: CATCCGTCCATGGAACACGCAAAACACTCGGAACCG...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAGTTTTGCGTGTTCCATaGACGGATGCTGGTATCTAT | + |
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Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLVLRVP*TDAGIY Trigger: ATAGATACCAGCATCCGTCCATGGAACACGCAAAAC...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR TCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAACAGCTTTTTCAATCTaGGTTCCTTCATGCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLTAFSI*VPSCHS Trigger: TGAGTGGCATGAAGGAACTCAGATTGAAAAAGCTGT...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR TCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTATGCCGACTGAAACTCTaGAGATGTACAGACTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLCRLKL*RCTDSF Trigger: AAAAGAGTCTGTACATCTTCAGAGTTTCAGTCGGCA...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR GCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTATCTGAAATCTGTTACTaGTGGCTGGTTAGGGTAATG | + |
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Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLSEICY*WLVRVM Trigger: CATTACCCTAACCAGCCAGCAGTAACAGATTTCAGA...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| 3UTR CAA 72 bp | ACCTTATCTGTAGGTTCTACATCCATGGCCAAGAAATaGCCGACTGAAACTCTGAAGATGTACAGACTCTTT | + |
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Preference number: 4 (lower is better) Translates to: TLSVGSTSMAKK*PTETLKMYRLF Trigger: AAAGAGTCTGTACATCTTCAGAGTTTCAGTCGGCAATTTCTTGGCCATGGATGTAGAACCTACAGATAAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR TCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTATGGTGGTATCTGTGTTaGGAATATGCTAACCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLWWYLC*EYANLV Trigger: AACAAGGTTAGCATATTCTCAACACAGATACCACCA...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR TCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTATTTATATCAGGGACTTaGGCATCTGCAGATTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLFISGT*ASADFG Trigger: ACCAAAATCTGCAGATGCTCAAGTCCCTGATATAAA...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAGTTGTGTCTCCCTTGTaGATAATTCTTGGCTATTCT | + |
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Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLVVSPL*IILGYS Trigger: AGAATAGCCAAGAATTATCCACAAGGGAGACACAAC...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR GCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGTGTTCCATGGACGGATaGTGGTATCTATGTATCCTG | + |
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Preference number: 4 (lower is better) Translates to: IQEDVHRLYATTMPVYIRCSMDG*WYLCIL Trigger: CAGGATACATAGATACCAGCATCCGTCCATGGAACA...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGGGTATCTATGTATCCTaGGCCCACACTTGGGATAAA | + |
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Preference number: 4 (lower is better) Translates to: IQEDVHRLYATTMPVYIRGIYVS*AHTWDK Trigger: TTTATCCCAAGTGTGGGCCCAGGATACATAGATACC...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CCA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTATACTTTCTGTCATGGTaGGTTCAAATACACAACGTA | + |
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Preference number: 4 (lower is better) Translates to: GITTKLRDEVCCVDSPCLYFLSW*VQIHNV Trigger: TACGTTGTGTATTTGAACCCACCATGACAGAAAGTA...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR TCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGACACAACGTACACAATaGCAAAAACTCCTCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: IQEDVHRLYATTMPVYIRTQRTQ*QKLLCG Trigger: ACCACAGAGGAGTTTTTGTCATTGTGTACGTTGTGT...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR GCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGCTCAGAGATGAAGTATaGTGTGTGGATTCACCATGT | + |
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Preference number: 4 (lower is better) Translates to: IQEDVHRLYATTMPVYIRLRDEV*CVDSPC Trigger: ACATGGTGAATCCACACAGCATACTTCATCTCTGAG...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGGAAATCTGTTACTGCTaGCTGGTTAGGGTAATGTGT | + |
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Preference number: 4 (lower is better) Translates to: IQEDVHRLYATTMPVYIREICYC*LVRVMC Trigger: ACACATTACCCTAACCAGCCAGCAGTAACAGATTTC...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR TCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGCATAATACTTCCCATTaGTTCGGTTCCGAGTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: IQEDVHRLYATTMPVYIRHNTSH*FGSECF Trigger: AAAACACTCGGAACCGAATCAATGGGAAGTATTATG...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGTCGTTGATGAAGTTCTaGAAGAAGGTCAAGTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: IQEDVHRLYATTMPVYIRSLMKF*KKVKSK Trigger: TTTGGACTTGACCTTCTTCCAGAACTTCATCAACGA...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR GCA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGGTATACAGGAGGATGTaGATAGATTATATGCAACTA | + |
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Preference number: 4 (lower is better) Translates to: IQEDVHRLYATTMPVYIRVYRRM*IDYMQL Trigger: TAGTTGCATATAATCTATGCACATCCTCCTGTATAC...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS GCA 90 bp | GGGCGGTCTCCTCCCGATGCCCAGAGGCGACAGCTACCTTTCCGTTaGACCCAGAGCCCAGCAGGCCTCGATCCTTCTACTCTCCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: GRSPPDAQRRQLPFR*TQSPAGLDPSTLPV Trigger: GACCGGGAGAGTAGAAGGATCGAGGCCTGCTGGGCTCTGGGTGCAACGGAAAGGTAGCTGTCGCCTCTGGGCATCGGGAGGAGACCGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000682663.1 ENST00000684211.1 ENST00000684753.1 |
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| CDS CCA 90 bp | TCGATCCTTCTACTCTCCCGGTCGGCTCAAGGCCCAGAGGCAGTCTaGGGGCACAAGGAGAAGGTGCTGAAAAAGGCTTCCATCCGACCC | + |
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Preference number: 5 (lower is better) Translates to: SILLLSRSAQGPEAV*GHKEKVLKKASIRP Trigger: GGGTCGGATGGAAGCCTTTTTCAGCACCTTCTCCTTGTGCCCCCAGACTGCCTCTGGGCCTTGAGCCGACCGGGAGAGTAGAAGGATCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000682663.1 ENST00000684211.1 ENST00000684753.1 |
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| CDS TCA 90 bp | GTGTCTGAAGTGCGGCACTCAGACCAATTTCATAATACTTCCCATTaGTTCGGTTCCGAGTGTTTTGCGTGTTCCATGGACGGATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: VSEVRHSDQFHNTSH*FGSECFACSMDGCW Trigger: CCAGCATCCGTCCATGGAACACGCAAAACACTCGGAACCGAATCAATGGGAAGTATTATGAAATTGGTCTGAGTGCCGCACTTCAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000358812.9 ENST00000682076.1 ENST00000682417.1 ENST00000682663.1 ENST00000683151.1 ENST00000684164.1 ENST00000684753.1 |
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| CDS CCA 90 bp | ATAATACTTCCCATTGATTCGGTTCCGAGTGTTTTGCGTGTTCCATaGACGGATGCTGGTATCTATGTATCCTGGGCCCACACTTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: IILPIDSVPSVLRVP*TDAGIYVSWAHTWD Trigger: ATCCCAAGTGTGGGCCCAGGATACATAGATACCAGCATCCGTCCATGGAACACGCAAAACACTCGGAACCGAATCAATGGGAAGTATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000358812.9 ENST00000682076.1 ENST00000682417.1 ENST00000682663.1 ENST00000683151.1 ENST00000684164.1 ENST00000684753.1 |
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| CDS-3UTR CAA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTACGGGTAATTCACTTCTaGCAAGGACTCGGCCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: GITTKLRDEVCCVDSPCLRVIHF*QGLGQR Trigger: CCTCTGGCCGAGTCCTTGCAAGAAGTGAATTACCCG...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CAA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTATCGGTTCCGAGTGTTTaGCGTGTTCCATGGACGGAT | + |
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Preference number: 5 (lower is better) Translates to: GITTKLRDEVCCVDSPCLSVPSV*RVPWTD Trigger: ATCCGTCCATGGAACACGCAAAACACTCGGAACCGA...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CAA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAGGGCTAGTACACCAATaGAAGCTGAGCGCATTTGTC | + |
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Preference number: 5 (lower is better) Translates to: GITTKLRDEVCCVDSPCLGLVHQ*KLSAFV Trigger: GACAAATGCGCTCAGCTTCAATTGGTGTACTAGCCC...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS CCA 90 bp | ACTGTAACTTCCCAATTCAGGATAAAAGCTGGAGCCAATGTCATCTaGAGGGTTGTGTCTCCCTTGTGGATAATTCTTGGCTATTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: TVTSQFRIKAGANVI*RVVSPLWIILGYSR Trigger: CCTAGAATAGCCAAGAATTATCCACAAGGGAGACACAACCCTCCAGATGACATTGGCTCCAGCTTTTATCCTGAATTGGGAAGTTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000358812.9 ENST00000369293.6 ENST00000682076.1 ENST00000682663.1 ENST00000683151.1 ENST00000683172.1 ENST00000684211.1 ENST00000684753.1 |
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| CDS-3UTR CAA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAAGGGTTGTGTCTCCCTaGTGGATAATTCTTGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: GITTKLRDEVCCVDSPCLRVVSP*WIILGY Trigger: ATAGCCAAGAATTATCCACAAGGGAGACACAACCCT...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS TCA 90 bp | GTACACCAATTGAAGCTGAGCGCATTTGTCTCATGTGAGTTTCTATaGCAGAAGGATCCCGAGAACTGTAACTTCCCAATTCAGGATAAA | + |
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Preference number: 5 (lower is better) Translates to: VHQLKLSAFVSCEFL*QKDPENCNFPIQDK Trigger: TTTATCCTGAATTGGGAAGTTACAGTTCTCGGGATCCTTCTGTCATAGAAACTCACATGAGACAAATGCGCTCAGCTTCAATTGGTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000358812.9 ENST00000682663.1 ENST00000683151.1 ENST00000683172.1 ENST00000684753.1 |
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| CDS TCA 90 bp | CTAAAGCAATTGAAGCTGAGCGCATTTGTCTCATGTGAGTTTCTATaGCAGAAGGATCCCGAGAACTGTAACTTCCCAATTCAGGATAAA | + |
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Preference number: 5 (lower is better) Translates to: LKQLKLSAFVSCEFL*QKDPENCNFPIQDK Trigger: TTTATCCTGAATTGGGAAGTTACAGTTCTCGGGATCCTTCTGTCATAGAAACTCACATGAGACAAATGCGCTCAGCTTCAATTGCTTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000682076.1 |
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| CDS CCA 90 bp | AAAGACCTGGTTTATGAGGACGGTAATCTAGGTACACTGTATTACTaGTTCTTTTGGGAACAGCTTTTTCAATCTGAGTTCCTTCATGCC | + |
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Preference number: 5 (lower is better) Translates to: KDLVYEDGNLGTLYY*FFWEQLFQSEFLHA Trigger: GGCATGAAGGAACTCAGATTGAAAAAGCTGTTCCCAAAAGAACCAGTAATACAGTGTACCTAGATTACCGTCCTCATAAACCAGGTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000358812.9 ENST00000682076.1 ENST00000682417.1 ENST00000682663.1 ENST00000683151.1 ENST00000684164.1 ENST00000684753.1 |
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| CDS CCA 90 bp | ATCCCTTTCCTTGCCATTCAAGCTTGTAGAGGCTACCACATTCTTTaGCTCATGAACTTCTTGTTCCATCTTTATGTAGAGCTGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: IPFLAIQACRGYHIL*LMNFLFHLYVELEK Trigger: TTTTTCCAGCTCTACATAAAGATGGAACAAGAAGTTCATGAGCCAAAGAATGTGGTAGCCTCTACAAGCTTGAATGGCAAGGAAAGGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474553.1 |
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| CDS-3UTR CAA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAAAAATAGTAAGTGTTTaGCAGGGTCGGGTAATTCAC | + |
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Preference number: 5 (lower is better) Translates to: GITTKLRDEVCCVDSPCLKIVSV*QGRVIH Trigger: GTGAATTACCCGACCCTGCAAAACACTTACTATTTT...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CAA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGTCCATGGCCAAGAAATaGCCGACTGAAACTCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: IQEDVHRLYATTMPVYIRSMAKK*PTETLK Trigger: CTTCAGAGTTTCAGTCGGCAATTTCTTGGCCATGGA...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS TCA 90 bp | AATTACCAATTGAAGCTGAGCGCATTTGTCTCATGTGAGTTTCTATaGCAGAAGGATCCCGAGAACTGTAACTTCCCAATTCAGGATAAA | + |
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Preference number: 5 (lower is better) Translates to: NYQLKLSAFVSCEFL*QKDPENCNFPIQDK Trigger: TTTATCCTGAATTGGGAAGTTACAGTTCTCGGGATCCTTCTGTCATAGAAACTCACATGAGACAAATGCGCTCAGCTTCAATTGGTAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369293.6 ENST00000684211.1 |
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| CDS-3UTR CAA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTATTAAGTTCAGAGGCTTaGGAAGGTTTCATAGTGATT | + |
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Preference number: 5 (lower is better) Translates to: GITTKLRDEVCCVDSPCLLSSEA*EGFIVI Trigger: AATCACTATGAAACCTTCCAAAGCCTCTGAACTTAA...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CAA 90 bp | ATACAGGAGGATGTGCATAGATTATATGCAACTACTATGCCAGTTTATATCAGGAACATAGGAAGAGCATaGCCAGTCTTCGTCTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: IQEDVHRLYATTMPVYIRNIGRA*PVFVLY Trigger: GTACAAGACGAAGACTGGCAATGCTCTTCCTATGTT...CCTGATATAAACTGGCATAGTAGTTGCATATAATCTATGCACATCCTCCTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS-3UTR CAA 90 bp | GGAATCACAACAAAGCTCAGAGATGAAGTATGCTGTGTGGATTCACCATGTCTAGTATTACTGGTTCTTTaGGGAACAGCTTTTTCAATC | + |
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Preference number: 5 (lower is better) Translates to: GITTKLRDEVCCVDSPCLVLLVL*GTAFSI Trigger: GATTGAAAAAGCTGTTCCCAAAAGAACCAGTAATAC...TAGACATGGTGAATCCACACAGCATACTTCATCTCTGAGCTTTGTTGTGATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358812.9 |
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| CDS CAA 90 bp | CGGGCGGTCTCCTCCCGATGCCCAGAGGCGACAGCTACCTTTCCGTaGCACCCAGAGCCCAGCAGGCCTCGATCCTTCTACTCTCCCGGT | + |
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Preference number: 6 (lower is better) Translates to: RAVSSRCPEATATFP*HPEPSRPRSFYSPG Trigger: ACCGGGAGAGTAGAAGGATCGAGGCCTGCTGGGCTCTGGGTGCAACGGAAAGGTAGCTGTCGCCTCTGGGCATCGGGAGGAGACCGCCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000682663.1 ENST00000684211.1 ENST00000684753.1 |
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| CDS GCA 72 bp | CCTCCCGATGCCCAGAGGCGACAGCTACCTTTCCGTTaGACCCAGAGCCCAGCAGGCCTCGATCCTTCTACT | + |
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Preference number: 6 (lower is better) Translates to: PPDAQRRQLPFR*TQSPAGLDPST Trigger: AGTAGAAGGATCGAGGCCTGCTGGGCTCTGGGTGCAACGGAAAGGTAGCTGTCGCCTCTGGGCATCGGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000682663.1 ENST00000684211.1 ENST00000684753.1 |
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| CDS CAA 72 bp | TCCTCCCGATGCCCAGAGGCGACAGCTACCTTTCCGTaGCACCCAGAGCCCAGCAGGCCTCGATCCTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: SSRCPEATATFP*HPEPSRPRSFY Trigger: GTAGAAGGATCGAGGCCTGCTGGGCTCTGGGTGCAACGGAAAGGTAGCTGTCGCCTCTGGGCATCGGGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000682663.1 ENST00000684211.1 ENST00000684753.1 |
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| CDS GCA 72 bp | TTCGGTTCCGAGTGTTTTGCGTGTTCCATGGACGGATaGTGGTATCTATGTATCCTGGGCCCACACTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: FGSECFACSMDG*WYLCILGPHLG Trigger: TCCCAAGTGTGGGCCCAGGATACATAGATACCAGCATCCGTCCATGGAACACGCAAAACACTCGGAACCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000358812.9 ENST00000682076.1 ENST00000682417.1 ENST00000682663.1 ENST00000683151.1 ENST00000684164.1 ENST00000684753.1 |
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| CDS CCA 72 bp | CCCATTGATTCGGTTCCGAGTGTTTTGCGTGTTCCATaGACGGATGCTGGTATCTATGTATCCTGGGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PIDSVPSVLRVP*TDAGIYVSWAH Trigger: GTGGGCCCAGGATACATAGATACCAGCATCCGTCCATGGAACACGCAAAACACTCGGAACCGAATCAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000358812.9 ENST00000682076.1 ENST00000682417.1 ENST00000682663.1 ENST00000683151.1 ENST00000684164.1 ENST00000684753.1 |
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| CDS CCA 72 bp | GGAGCCAATGTCATCTGGAGGGTTGTGTCTCCCTTGTaGATAATTCTTGGCTATTCTAGGGTCCCAATGCTC | + |
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Preference number: 6 (lower is better) Translates to: GANVIWRVVSPL*IILGYSRVPML Trigger: GAGCATTGGGACCCTAGAATAGCCAAGAATTATCCACAAGGGAGACACAACCCTCCAGATGACATTGGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000358812.9 ENST00000369293.6 ENST00000682076.1 ENST00000682663.1 ENST00000683151.1 ENST00000683172.1 ENST00000684211.1 ENST00000684753.1 |
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| CDS CAA 72 bp | GCTGGAGCCAATGTCATCTGGAGGGTTGTGTCTCCCTaGTGGATAATTCTTGGCTATTCTAGGGTCCCAATG | + |
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Preference number: 6 (lower is better) Translates to: AGANVIWRVVSP*WIILGYSRVPM Trigger: CATTGGGACCCTAGAATAGCCAAGAATTATCCACAAGGGAGACACAACCCTCCAGATGACATTGGCTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000358812.9 ENST00000369293.6 ENST00000682076.1 ENST00000682663.1 ENST00000683151.1 ENST00000683172.1 ENST00000684211.1 ENST00000684753.1 |
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| CDS CAA 90 bp | CAGACCAATTTCATAATACTTCCCATTGATTCGGTTCCGAGTGTTTaGCGTGTTCCATGGACGGATGCTGGTATCTATGTATCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: QTNFIILPIDSVPSV*RVPWTDAGIYVSWA Trigger: GGCCCAGGATACATAGATACCAGCATCCGTCCATGGAACACGCAAAACACTCGGAACCGAATCAATGGGAAGTATTATGAAATTGGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000358812.9 ENST00000682076.1 ENST00000682417.1 ENST00000682663.1 ENST00000683151.1 ENST00000684164.1 ENST00000684753.1 |
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| CDS TCA 72 bp | GTGCGGCACTCAGACCAATTTCATAATACTTCCCATTaGTTCGGTTCCGAGTGTTTTGCGTGTTCCATGGAC | + |
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Preference number: 6 (lower is better) Translates to: VRHSDQFHNTSH*FGSECFACSMD Trigger: GTCCATGGAACACGCAAAACACTCGGAACCGAATCAATGGGAAGTATTATGAAATTGGTCTGAGTGCCGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000358812.9 ENST00000682076.1 ENST00000682417.1 ENST00000682663.1 ENST00000683151.1 ENST00000684164.1 ENST00000684753.1 |
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| CDS CCA 72 bp | TCCCAATTCAGGATAAAAGCTGGAGCCAATGTCATCTaGAGGGTTGTGTCTCCCTTGTGGATAATTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SQFRIKAGANVI*RVVSPLWIILG Trigger: GCCAAGAATTATCCACAAGGGAGACACAACCCTCCAGATGACATTGGCTCCAGCTTTTATCCTGAATTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000358812.9 ENST00000369293.6 ENST00000682076.1 ENST00000682663.1 ENST00000683151.1 ENST00000683172.1 ENST00000684211.1 ENST00000684753.1 |
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| CDS CAA 72 bp | GTGGGTACCAAGAGAGGGCTAGTACACCTTACAGTTTaGCATGTCAGGAGTGTTGACATGGGTCTTAATATG | + |
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Preference number: 6 (lower is better) Translates to: VGTKRGLVHLTV*HVRSVDMGLNM Trigger: CATATTAAGACCCATGTCAACACTCCTGACATGCAAAACTGTAAGGTGTACTAGCCCTCTCTTGGTACCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474553.1 |
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| CDS CAA 90 bp | TTACATCAGGTGGGTACCAAGAGAGGGCTAGTACACCTTACAGTTTaGCATGTCAGGAGTGTTGACATGGGTCTTAATATGCTAAGATCA | + |
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Preference number: 6 (lower is better) Translates to: LHQVGTKRGLVHLTV*HVRSVDMGLNMLRS Trigger: TGATCTTAGCATATTAAGACCCATGTCAACACTCCTGACATGCAAAACTGTAAGGTGTACTAGCCCTCTCTTGGTACCCACCTGATGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474553.1 |
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| CDS TCA 72 bp | TTGAAGCTGAGCGCATTTGTCTCATGTGAGTTTCTATaGCAGAAGGATCCCGAGAACTGTAACTTCCCAATT | + |
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Preference number: 6 (lower is better) Translates to: LKLSAFVSCEFL*QKDPENCNFPI Trigger: AATTGGGAAGTTACAGTTCTCGGGATCCTTCTGTCATAGAAACTCACATGAGACAAATGCGCTCAGCTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000358812.9 ENST00000369293.6 ENST00000682076.1 ENST00000682663.1 ENST00000683151.1 ENST00000683172.1 ENST00000684211.1 ENST00000684753.1 |
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| CDS CAA 72 bp | TTCATAATACTTCCCATTGATTCGGTTCCGAGTGTTTaGCGTGTTCCATGGACGGATGCTGGTATCTATGTA | + |
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Preference number: 6 (lower is better) Translates to: FIILPIDSVPSV*RVPWTDAGIYV Trigger: TACATAGATACCAGCATCCGTCCATGGAACACGCAAAACACTCGGAACCGAATCAATGGGAAGTATTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000358812.9 ENST00000682076.1 ENST00000682417.1 ENST00000682663.1 ENST00000683151.1 ENST00000684164.1 ENST00000684753.1 |
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| CDS TCA 72 bp | CCTTCATTTACTATCTTCTTCAATCCAAAGAATGCCTaGGTCAGCATGCCAGCTCCATGGATTAAATTAGGG | + |
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Preference number: 6 (lower is better) Translates to: PSFTIFFNPKNA*VSMPAPWIKLG Trigger: CCCTAATTTAATCCATGGAGCTGGCATGCTGACTCAGGCATTCTTTGGATTGAAGAAGATAGTAAATGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369293.6 |
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| CDS CCA 72 bp | CTTGCCATTCAAGCTTGTAGAGGCTACCACATTCTTTaGCTCATGAACTTCTTGTTCCATCTTTATGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: LAIQACRGYHIL*LMNFLFHLYVE Trigger: CTCTACATAAAGATGGAACAAGAAGTTCATGAGCCAAAGAATGTGGTAGCCTCTACAAGCTTGAATGGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474553.1 |
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| CDS CAA 72 bp | GGAAAAAGGAACAACAAAAACACTAATCCAGCACTGTaGCATCCCGACTTAGCAAAGGCTAAGAGTCTAAGA | + |
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Preference number: 6 (lower is better) Translates to: GKRNNKNTNPAL*HPDLAKAKSLR Trigger: TCTTAGACTCTTAGCCTTTGCTAAGTCGGGATGCAACAGTGCTGGATTAGTGTTTTTGTTGTTCCTTTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000682663.1 ENST00000684211.1 ENST00000684753.1 |
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| CDS CAA 90 bp | AATCAATGCATTAAGAAACAGGCAGCTGGCGATCTAATGCATAAGTaGCTCTTTCCTTACTGTATTTTTCAGACCACTTGCGAGTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: NQCIKKQAAGDLMHK*LFPYCIFQTTCESV Trigger: AACTGACTCGCAAGTGGTCTGAAAAATACAGTAAGGAAAGAGCAACTTATGCATTAGATCGCCAGCTGCCTGTTTCTTAATGCATTGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000358812.9 ENST00000682076.1 ENST00000682417.1 ENST00000682663.1 ENST00000683151.1 ENST00000684164.1 ENST00000684753.1 |
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| CDS TCA 72 bp | GTCAGCATGCCAGCTCCATGGATTAAATTAGGGTTTTaGGTCAGTATTCCAACAGTCAAATTATTTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VSMPAPWIKLGF*VSIPTVKLFSA Trigger: GGCAGAAAATAATTTGACTGTTGGAATACTGACTCAAAACCCTAATTTAATCCATGGAGCTGGCATGCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369293.6 |
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| CDS GCA 72 bp | GGAGGTAATATTGATGATCTGAATTCCGAGTTCAAATaGTTAACTGCTGTGCAATGCTTCTTTTTATGTTTA | + |
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Preference number: 6 (lower is better) Translates to: GGNIDDLNSEFK*LTAVQCFFLCL Trigger: TAAACATAAAAAGAAGCATTGCACAGCAGTTAAGCATTTGAACTCGGAATTCAGATCATCAATATTACCTCC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000682417.1 |
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